BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037178
(311 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 156/251 (62%), Positives = 199/251 (79%), Gaps = 7/251 (2%)
Query: 66 FLQEITTLCEESKSLNKALSLLQENLHNA-----DLKEATGVLLQACGHEKDIEIGKRVH 120
FLQEI LCE + +L AL L+Q + NA KEA G+LLQACG++KDIE G+R+H
Sbjct: 8 FLQEIAALCE-TDNLTTALILIQSHSQNAAFISLQAKEAIGLLLQACGNQKDIETGRRLH 66
Query: 121 ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELY 180
+ VS ST + ND+++NTRLI MY++CG PLDSR VFD+++T+NL QWNALVSG+T+N LY
Sbjct: 67 KFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLY 126
Query: 181 TDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNA 240
DV+ +F++L SDT+ +PDNFTFP VIKACGGI DV G +HGM KMGL+ DVFV NA
Sbjct: 127 GDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNA 186
Query: 241 LIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI 300
L+ MYGKC V+E +K+F+ MPE NLVSWNS+IC FSENGFS +SFDLL++M+G EEG +
Sbjct: 187 LVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLG-EEGLL 245
Query: 301 PDVITVVTVLP 311
PDV+TVVT+LP
Sbjct: 246 PDVVTVVTILP 256
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 116/209 (55%), Gaps = 1/209 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++ACG D+ +G+ +H +V + F+ N L+ MY CG ++ +VFD +
Sbjct: 152 VIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNA-LVGMYGKCGAVDEAMKVFDFMPET 210
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL WN+++ F++N D + +E+ + L PD T ++ C G +V G G+
Sbjct: 211 NLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGI 270
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+A K+GL +V V+NA++ MY KC ++ E F +N+VSWN++I FS G
Sbjct: 271 HGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDV 330
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+F+LL +M E + +T++ VLP
Sbjct: 331 NEAFNLLQEMQIQGEEMKANEVTILNVLP 359
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 109/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC H K ++ GK +H V DF + T L++ Y CG +R +FD +K +
Sbjct: 457 LLLACAHLKSLQYGKEIHGYV-LRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDK 515
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL WNA++SG+++N L + L++F + S+ ++ V AC ++ + G
Sbjct: 516 NLVSWNAMISGYSQNGLPYESLALFRKSLSEG-IQSHEIAIVSVFGACSQLSALRLGKEA 574
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K D FV ++I MY K ++E K+F+ + ++N+ SWN+II +G
Sbjct: 575 HGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHG 634
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L +M + G +PD T + +L
Sbjct: 635 KEAIELYERMK--KVGQMPDRFTYIGIL 660
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 114/238 (47%), Gaps = 17/238 (7%)
Query: 80 LNKALSLLQENLHNADLKEATGV----LLQACGHEKDIEIGKRVH----ELVSASTQFSN 131
+N+A +LLQE + +A V +L AC + + K +H + SN
Sbjct: 330 VNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQHVELSN 389
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
FI+ Y+ CG + +VF + + + WNAL+ G +N L + +++
Sbjct: 390 AFIL------AYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMT 443
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ +PD FT ++ AC + + +G +HG + GL D FV +L++ Y C
Sbjct: 444 YSGQ-QPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKA 502
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
LF+ M ++NLVSWN++I G+S+NG ES L K + EG I +V+V
Sbjct: 503 SSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSL--SEGIQSHEIAIVSV 558
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 13/187 (6%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC + +GK H V + Q + D + +I MY+ G +SR+VFD LK +N+
Sbjct: 561 ACSQLSALRLGKEAHGYVLKALQ-TEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVA 619
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
WNA++ + + + ++ + ++ PD FT+ ++ ACG V G
Sbjct: 620 SWNAIIVAHGIHGHGKEAIELYERMKKVGQM-PDRFTYIGILMACGHAGLVEEGLKYFKE 678
Query: 226 AAKMGLIGDVFVSNA-LIAMYGKCAFVEEMVKLFEVMPER--NLVSWNSIICGFSENGFS 282
LI A LI M + +++ ++L MPE N + W+S++ S
Sbjct: 679 MQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRI-WSSLL-------RS 730
Query: 283 CESFDLL 289
C +F L
Sbjct: 731 CRTFGAL 737
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 148/211 (70%), Positives = 173/211 (81%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
GVLLQACG KDIE+G+R+HE+VSASTQF NDF++NTR+ITMYS+CG P DSR VFD L+
Sbjct: 2 GVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLR 61
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+NLFQWNA+VS +T+NEL+ D +SIF EL S TE KPDNFT PCVIKAC G+ D+G G
Sbjct: 62 RKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQ 121
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HGMA KM L+ DVFV NALIAMYGKC VEE VK+FE MPERNLVSWNSIICGFSENG
Sbjct: 122 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENG 181
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
F ESF+ +M+ EE F+PDV T+VTVLP
Sbjct: 182 FLQESFNAFREMLVGEESFVPDVATLVTVLP 212
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 117/210 (55%), Gaps = 2/210 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC D+ +G+ +H + + S+ F+ N LI MY CG ++ +VF+ + R
Sbjct: 107 VIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNA-LIAMYGKCGLVEEAVKVFEHMPER 165
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVE-LSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
NL WN+++ GF++N + + F E L + PD T V+ C G D+ G
Sbjct: 166 NLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMA 225
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VHG+A K+GL ++ V+N+LI MY KC F+ E LF+ ++N+VSWNS+I G++
Sbjct: 226 VHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREED 285
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
C +F LL KM + D T++ VLP
Sbjct: 286 VCRTFYLLQKMQTEDAKMKADEFTILNVLP 315
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 113/210 (53%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G LL AC K + G+ +H + + D I L+++Y CG P ++ +FD ++
Sbjct: 412 GSLLLACSRMKSLHYGEEIHGF-ALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGME 470
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R+L WN +++G+++N L + +++F ++ SD ++P CV AC ++ + G
Sbjct: 471 HRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDG-IQPYEIAIMCVCGACSQLSALRLGK 529
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H A K L D+FVS+++I MY K + ++F+ + E+++ SWN II G+ +G
Sbjct: 530 ELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHG 589
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L KM+ G PD T +L
Sbjct: 590 RGKEALELFEKML--RLGLKPDDFTFTGIL 617
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 115/212 (54%), Gaps = 10/212 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C E+DIE G VH L + + + ++N LI MYS C F +++ +FD +
Sbjct: 210 VLPVCAGEEDIEKGMAVHGL-AVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKK 268
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVEL----SSDTELKPDNFTFPCVIKACGGIADVGF 218
N+ WN+++ G+ + E DV F L + D ++K D FT V+ C +++
Sbjct: 269 NIVSWNSMIGGYAREE---DVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQS 325
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
+HG + + GL + V+NA IA Y +C + ++F++M + + SWN+++CG+++
Sbjct: 326 LKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQ 385
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
N ++ DL ++M + G PD T+ ++L
Sbjct: 386 NSDPRKALDLYLQMT--DSGLDPDWFTIGSLL 415
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 109/207 (52%), Gaps = 4/207 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C +++ K +H SN+ + N I Y+ CG S RVFD + T+
Sbjct: 313 VLPVCLERSELQSLKELHGYSWRHGLQSNELVANA-FIAAYTRCGALCSSERVFDLMDTK 371
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNAL+ G+ +N L ++++++ D+ L PD FT ++ AC + + +G +
Sbjct: 372 TVSSWNALLCGYAQNSDPRKALDLYLQMT-DSGLDPDWFTIGSLLLACSRMKSLHYGEEI 430
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A + GL D F+ +L+++Y C LF+ M R+LVSWN +I G+S+NG
Sbjct: 431 HGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLP 490
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTV 309
E+ +L +M+ +G P I ++ V
Sbjct: 491 DEAINLFRQML--SDGIQPYEIAIMCV 515
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 87/176 (49%), Gaps = 16/176 (9%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC + +GK +H + + D +++ +I MY+ G S+R+FD L+ +++
Sbjct: 518 ACSQLSALRLGKELH-CFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVA 576
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS--- 220
WN +++G+ + + L +F ++ LKPD+FTF ++ AC G+ + G
Sbjct: 577 SWNVIIAGYGIHGRGKEALELFEKMLR-LGLKPDDFTFTGILMACSHAGLVEDGLEYFNQ 635
Query: 221 --GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
+H + K+ ++ M G+ +++ ++L E MP + + W+S++
Sbjct: 636 MLNLHNIEPKLEHY------TCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLL 685
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 159/312 (50%), Positives = 211/312 (67%), Gaps = 18/312 (5%)
Query: 14 PLFPSLRQKKSQPQFPATVIQRNKHSLRSIFKEKSSLSLSAKT---------NNASTQGL 64
PL ++ + T +NK+SL SIF +SLSLSA+T N+++ +
Sbjct: 9 PLSWRSHHSRTTVFYRITRKSKNKYSLHSIFTPIASLSLSAQTRQTKSLSFANSSTNRQF 68
Query: 65 HFLQEITTLCEESKSLNKALSLLQEN-----LHNADLKEATGVLLQACGHEKDIEIGKRV 119
L EI LCE S +L +AL LQ L +A EA GVLLQACG KDIE+G+R+
Sbjct: 69 SSLHEIKKLCE-SGNLKEALDFLQRESDDVVLDSAQRSEAMGVLLQACGQRKDIEVGRRL 127
Query: 120 HELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNEL 179
HE+VSASTQF NDF++NTR+ITMYS+CG P DSR VFD L+ +NLFQWNA+VS +T+NEL
Sbjct: 128 HEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNEL 187
Query: 180 YTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSN 239
+ D +SIF EL S TE KPDNFT PCVIKAC G+ D+G G +HGMA KM L+ DVFV N
Sbjct: 188 FEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGN 247
Query: 240 ALIAMYGKCAFVEEMVK-LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEG 298
ALIAMYGKC VEE VK +F++M + + SWN+++CG+++N ++ DL ++M + G
Sbjct: 248 ALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMT--DSG 305
Query: 299 FIPDVITVVTVL 310
PD T+ ++L
Sbjct: 306 LDPDWFTIGSLL 317
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 117/208 (56%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDS-RRVFDSLKT 161
+++AC D+ +G+ +H + + S+ F+ N LI MY CG ++ +RVFD + T
Sbjct: 214 VIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNA-LIAMYGKCGLVEEAVKRVFDLMDT 272
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+ + WNAL+ G+ +N L ++++++ D+ L PD FT ++ AC + + +G
Sbjct: 273 KTVSSWNALLCGYAQNSDPRKALDLYLQMT-DSGLDPDWFTIGSLLLACSRMKSLHYGEE 331
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG A + GL D F+ +L+++Y C LF+ M R+LVSWN +I G+S+NG
Sbjct: 332 IHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGL 391
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTV 309
E+ +L +M+ +G P I ++ V
Sbjct: 392 PDEAINLFRQML--SDGIQPYEIAIMCV 417
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 113/210 (53%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G LL AC K + G+ +H + + D I L+++Y CG P ++ +FD ++
Sbjct: 314 GSLLLACSRMKSLHYGEEIHGF-ALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGME 372
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R+L WN +++G+++N L + +++F ++ SD ++P CV AC ++ + G
Sbjct: 373 HRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDG-IQPYEIAIMCVCGACSQLSALRLGK 431
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H A K L D+FVS+++I MY K + ++F+ + E+++ SWN II G+ +G
Sbjct: 432 ELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHG 491
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L KM+ G PD T +L
Sbjct: 492 RGKEALELFEKML--RLGLKPDDFTFTGIL 519
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 87/176 (49%), Gaps = 16/176 (9%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC + +GK +H + + D +++ +I MY+ G S+R+FD L+ +++
Sbjct: 420 ACSQLSALRLGKELH-CFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVA 478
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS--- 220
WN +++G+ + + L +F ++ LKPD+FTF ++ AC G+ + G
Sbjct: 479 SWNVIIAGYGIHGRGKEALELFEKMLR-LGLKPDDFTFTGILMACSHAGLVEDGLEYFNQ 537
Query: 221 --GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
+H + K+ ++ M G+ +++ ++L E MP + + W+S++
Sbjct: 538 MLNLHNIEPKLEHY------TCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLL 587
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/288 (53%), Positives = 203/288 (70%), Gaps = 14/288 (4%)
Query: 37 KHSLRSIFKEKSS-LSLSAKTNNASTQG------LHFLQEITTLCEESKSLNKALSLLQE 89
K+SL S KSS +SA+T + ++ L L+EI+ LCE + LN AL LQ
Sbjct: 35 KNSLLSTSTPKSSYFFVSARTQSHQSRSVNPVSQLSLLEEISKLCE-AGDLNGALDFLQR 93
Query: 90 NLHN------ADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMY 143
N A KEA G+LLQ CG K++EIG+++ E++ S+QFS DF++NTRLITMY
Sbjct: 94 AWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMY 153
Query: 144 SLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTF 203
S+CG+PL+SR VFD L +NLFQWNALVSG+ +NELY + + F+EL S TE +PDNFTF
Sbjct: 154 SICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTF 213
Query: 204 PCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 263
PC+IKAC G D+ G VHGMA KMGLI D+FV NA+IA+YGKC F++E V+LF+ MPE
Sbjct: 214 PCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPE 273
Query: 264 RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+NL+SWNS+I GFSENGF E++ ++ +G IPDV T+VT+LP
Sbjct: 274 QNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLP 321
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 117/210 (55%), Gaps = 2/210 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L++AC + DI +GK VH + + D + +I +Y CGF ++ +FD + +
Sbjct: 216 LIKACTGKCDIHLGKSVHGM-AVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQ 274
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVEL-SSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
NL WN+L+ GF++N + + F L S L PD T ++ C G +V G
Sbjct: 275 NLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMV 334
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HGMA K+GL+ ++ V NALI MY KC + E LF + +++VSWNS+I +S GF
Sbjct: 335 IHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGF 394
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+FDLL KM EE + +T++ +LP
Sbjct: 395 VFETFDLLRKMWMEEELMEVNEVTILNLLP 424
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 110/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL ACG ++ GK +H V + N F+ L+++Y C P R F+ + +
Sbjct: 523 LLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVA-VSLLSLYFHCSKPFYGRTYFERMGDK 581
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WNA++SG+++NEL + LS+F ++ SD L+PD ++ AC ++ +G G V
Sbjct: 582 NSVCWNAMLSGYSQNELPNEALSLFRQMLSDG-LEPDEIAIASILGACSQLSALGLGKEV 640
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K L+ D FV+ +L+ MY K F+ ++F + + + SWN +I GF +G
Sbjct: 641 HCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQG 700
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L M ++ PD T + VL
Sbjct: 701 NKAVELFEDMKRSDKQ--PDRFTFLGVL 726
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 107/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC E ++ + +H S F +IN I Y+ CG + + VF + T+
Sbjct: 422 LLPACLEESELLSLRALHG-YSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTK 480
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA++ G +N L + E++ + PD+F+ ++ ACG + + +G +
Sbjct: 481 SVSSWNAVIGGHAQNGDPIKALDFYFEMTR-LGILPDDFSIVSLLLACGRLGLLQYGKEI 539
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + GL + FV+ +L+++Y C+ FE M ++N V WN+++ G+S+N
Sbjct: 540 HGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELP 599
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M+ +G PD I + ++L
Sbjct: 600 NEALSLFRQML--SDGLEPDEIAIASIL 625
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 104/209 (49%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL C E ++++G +H + + ++ ++ LI MYS CG ++ +F ++ +
Sbjct: 319 LLPVCSGEGNVDVGMVIHGM-AVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENK 377
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDN-FTFPCVIKACGGIADVGFGSG 221
++ WN+++ +++ + + ++ + EL N T ++ AC +++
Sbjct: 378 SVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRA 437
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG + + ++NA IA Y KC + +F M +++ SWN++I G ++NG
Sbjct: 438 LHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGD 497
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ D +M G +PD ++V++L
Sbjct: 498 PIKALDFYFEMT--RLGILPDDFSIVSLL 524
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 7/187 (3%)
Query: 81 NKALSLLQENLHNADLKE--ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
N+ALSL ++ L + + A +L AC + +GK VH ++ ++F+ +
Sbjct: 600 NEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACS- 658
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+ MY+ GF S+R+F+ L + + WN +++GF + + +F ++ ++ +P
Sbjct: 659 LMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKR-SDKQP 717
Query: 199 DNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
D FTF V++AC G+ G + M L ++ +I M G+ + E +
Sbjct: 718 DRFTFLGVLQACCHAGLVSEGLNY-LAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALN 776
Query: 257 LFEVMPE 263
MPE
Sbjct: 777 FINEMPE 783
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/288 (53%), Positives = 203/288 (70%), Gaps = 14/288 (4%)
Query: 37 KHSLRSIFKEKSS-LSLSAKTNNASTQG------LHFLQEITTLCEESKSLNKALSLLQE 89
K+SL S KSS +SA+T + ++ L L+EI+ LCE + LN AL LQ
Sbjct: 35 KNSLLSTSTPKSSYFFVSARTQSHQSRSVNPVSQLSLLEEISKLCE-AGDLNGALDFLQR 93
Query: 90 NLHN------ADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMY 143
N A KEA G+LLQ CG K++EIG+++ E++ S+QFS DF++NTRLITMY
Sbjct: 94 AWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMY 153
Query: 144 SLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTF 203
S+CG+PL+SR VFD L +NLFQWNALVSG+ +NELY + + F+EL S TE +PDNFTF
Sbjct: 154 SICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTF 213
Query: 204 PCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 263
PC+IKAC G D+ G VHGMA KMGLI D+FV NA+IA+YGKC F++E V+LF+ MPE
Sbjct: 214 PCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPE 273
Query: 264 RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+NL+SWNS+I GFSENGF E++ ++ +G IPDV T+VT+LP
Sbjct: 274 QNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLP 321
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 117/210 (55%), Gaps = 2/210 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L++AC + DI +GK VH + + D + +I +Y CGF ++ +FD + +
Sbjct: 216 LIKACTGKCDIHLGKSVHGM-AVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQ 274
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVEL-SSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
NL WN+L+ GF++N + + F L S L PD T ++ C G +V G
Sbjct: 275 NLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMV 334
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HGMA K+GL+ ++ V NALI MY KC + E LF + +++VSWNS+I +S GF
Sbjct: 335 IHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGF 394
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+FDLL KM EE + +T++ +LP
Sbjct: 395 VFETFDLLRKMWMEEELMEVNEVTILNLLP 424
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 111/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL ACG ++ GK +H V + N F+ L+++Y C P R F+++ +
Sbjct: 523 LLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVA-VSLLSLYFHCSKPFYGRTYFETMGDK 581
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WNA++SG+++NEL + LS+F ++ SD L+PD ++ AC ++ +G G V
Sbjct: 582 NSVCWNAMLSGYSQNELPNEALSLFRQMLSDG-LEPDEIAIASILGACSQLSALGLGKEV 640
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K L+ D FV+ +L+ MY K F+ ++F + + + SWN +I GF +G
Sbjct: 641 HCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQG 700
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L M ++ PD T + VL
Sbjct: 701 NKAVELFEDMKRSDKQ--PDRFTFLGVL 726
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 107/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC E ++ + +H S F +IN I Y+ CG + + VF + T+
Sbjct: 422 LLPACLEESELLSLRALHG-YSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTK 480
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA++ G +N L + E++ + PD+F+ ++ ACG + + +G +
Sbjct: 481 SVSSWNAVIGGHAQNGDPIKALDFYFEMTR-LGILPDDFSIVSLLLACGRLGLLQYGKEI 539
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + GL + FV+ +L+++Y C+ FE M ++N V WN+++ G+S+N
Sbjct: 540 HGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELP 599
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M+ +G PD I + ++L
Sbjct: 600 NEALSLFRQML--SDGLEPDEIAIASIL 625
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 104/209 (49%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL C E ++++G +H + + ++ ++ LI MYS CG ++ +F ++ +
Sbjct: 319 LLPVCSGEGNVDVGMVIHGM-AVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENK 377
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDN-FTFPCVIKACGGIADVGFGSG 221
++ WN+++ +++ + + ++ + EL N T ++ AC +++
Sbjct: 378 SVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRA 437
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG + + ++NA IA Y KC + +F M +++ SWN++I G ++NG
Sbjct: 438 LHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGD 497
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ D +M G +PD ++V++L
Sbjct: 498 PIKALDFYFEMT--RLGILPDDFSIVSLL 524
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 7/187 (3%)
Query: 81 NKALSLLQENLHNADLKE--ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
N+ALSL ++ L + + A +L AC + +GK VH ++ ++F+ +
Sbjct: 600 NEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACS- 658
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+ MY+ GF S+R+F+ L + + WN +++GF + + +F ++ ++ +P
Sbjct: 659 LMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKR-SDKQP 717
Query: 199 DNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
D FTF V++AC G+ G + M L ++ +I M G+ + E +
Sbjct: 718 DRFTFLGVLQACCHAGLVSEGLNY-LAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALN 776
Query: 257 LFEVMPE 263
MPE
Sbjct: 777 FINEMPE 783
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 136/257 (52%), Positives = 191/257 (74%), Gaps = 11/257 (4%)
Query: 65 HFLQEITTLCEESKSLNKALSLLQENLHNAD--------LKEATGVLLQACGHEKDIEIG 116
HFL+ I+ CE + L+K+ +QE + + + ++EA G+LLQA G KDIE+G
Sbjct: 45 HFLRRISNFCE-TGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMG 103
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
+++H+LVS ST+ ND ++ TR+ITMY++CG P DSR VFD+L+++NLFQWNA++S +++
Sbjct: 104 RKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSR 163
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF 236
NELY +VL F+E+ S T+L PD+FT+PCVIKAC G++DVG G VHG+ K GL+ DVF
Sbjct: 164 NELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVF 223
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM--G 294
V NAL++ YG FV + ++LF++MPERNLVSWNS+I FS+NGFS ESF LL +MM
Sbjct: 224 VGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEEN 283
Query: 295 CEEGFIPDVITVVTVLP 311
+ F+PDV T+VTVLP
Sbjct: 284 GDGAFMPDVATLVTVLP 300
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 113/212 (53%), Gaps = 4/212 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC D+ IG VH LV T D + L++ Y GF D+ ++FD + R
Sbjct: 193 VIKACAGMSDVGIGLAVHGLV-VKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPER 251
Query: 163 NLFQWNALVSGFTKNELYTD---VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
NL WN+++ F+ N + +L +E + D PD T V+ C ++G G
Sbjct: 252 NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 311
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
GVHG A K+ L ++ ++NAL+ MY KC + +F++ +N+VSWN+++ GFS
Sbjct: 312 KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAE 371
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G + +FD+L +M+ E D +T++ +P
Sbjct: 372 GDTHGTFDVLRQMLAGGEDVKADEVTILNAVP 403
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC K + +GK VH + D + ++++Y CG + +FD+++ +
Sbjct: 502 LLSACSKLKSLRLGKEVHGFI-IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN +++G+ +N L +F ++ ++ + V AC + + G
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVL-YGIQLCGISMMPVFGACSLLPSLRLGREA 619
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K L D F++ +LI MY K + + K+F + E++ SWN++I G+ +G +
Sbjct: 620 HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLA 679
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M G PD +T + VL
Sbjct: 680 KEAIKLFEEMQ--RTGHNPDDLTFLGVL 705
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 104/202 (51%), Gaps = 5/202 (2%)
Query: 95 DLKEATGVLLQA---CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLD 151
D+K +L A C HE + K +H S +F + ++ + Y+ CG
Sbjct: 390 DVKADEVTILNAVPVCFHESFLPSLKELH-CYSLKQEFVYNELVANAFVASYAKCGSLSY 448
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
++RVF ++++ + WNAL+ G ++ L +++ + L PD+FT ++ AC
Sbjct: 449 AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI-SGLLPDSFTVCSLLSACS 507
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
+ + G VHG + L D+FV +++++Y C + + LF+ M +++LVSWN+
Sbjct: 508 KLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNT 567
Query: 272 IICGFSENGFSCESFDLLIKMM 293
+I G+ +NGF + + +M+
Sbjct: 568 VITGYLQNGFPDRALGVFRQMV 589
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 136/257 (52%), Positives = 191/257 (74%), Gaps = 11/257 (4%)
Query: 65 HFLQEITTLCEESKSLNKALSLLQENLHNAD--------LKEATGVLLQACGHEKDIEIG 116
HFL+ I+ CE + L+K+ +QE + + + ++EA G+LLQA G KDIE+G
Sbjct: 400 HFLRRISNFCE-TGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMG 458
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
+++H+LVS ST+ ND ++ TR+ITMY++CG P DSR VFD+L+++NLFQWNA++S +++
Sbjct: 459 RKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSR 518
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF 236
NELY +VL F+E+ S T+L PD+FT+PCVIKAC G++DVG G VHG+ K GL+ DVF
Sbjct: 519 NELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVF 578
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM--G 294
V NAL++ YG FV + ++LF++MPERNLVSWNS+I FS+NGFS ESF LL +MM
Sbjct: 579 VGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEEN 638
Query: 295 CEEGFIPDVITVVTVLP 311
+ F+PDV T+VTVLP
Sbjct: 639 GDGAFMPDVATLVTVLP 655
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 113/212 (53%), Gaps = 4/212 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC D+ IG VH LV T D + L++ Y GF D+ ++FD + R
Sbjct: 548 VIKACAGMSDVGIGLAVHGLV-VKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPER 606
Query: 163 NLFQWNALVSGFTKNELYTD---VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
NL WN+++ F+ N + +L +E + D PD T V+ C ++G G
Sbjct: 607 NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 666
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
GVHG A K+ L ++ ++NAL+ MY KC + +F++ +N+VSWN+++ GFS
Sbjct: 667 KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAE 726
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G + +FD+L +M+ E D +T++ +P
Sbjct: 727 GDTHGTFDVLRQMLAGGEDVKADEVTILNAVP 758
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC K + +GK VH + D + ++++Y CG + +FD+++ +
Sbjct: 857 LLSACSKLKSLRLGKEVHGFI-IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 915
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN +++G+ +N L +F ++ ++ + V AC + + G
Sbjct: 916 SLVSWNTVITGYLQNGFPDRALGVFRQMVL-YGIQLCGISMMPVFGACSLLPSLRLGREA 974
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K L D F++ +LI MY K + + K+F + E++ SWN++I G+ +G +
Sbjct: 975 HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLA 1034
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M G PD +T + VL
Sbjct: 1035 KEAIKLFEEMQ--RTGHNPDDLTFLGVL 1060
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 104/202 (51%), Gaps = 5/202 (2%)
Query: 95 DLKEATGVLLQA---CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLD 151
D+K +L A C HE + K +H S +F + ++ + Y+ CG
Sbjct: 745 DVKADEVTILNAVPVCFHESFLPSLKELH-CYSLKQEFVYNELVANAFVASYAKCGSLSY 803
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
++RVF ++++ + WNAL+ G ++ L +++ + L PD+FT ++ AC
Sbjct: 804 AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI-SGLLPDSFTVCSLLSACS 862
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
+ + G VHG + L D+FV +++++Y C + + LF+ M +++LVSWN+
Sbjct: 863 KLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNT 922
Query: 272 IICGFSENGFSCESFDLLIKMM 293
+I G+ +NGF + + +M+
Sbjct: 923 VITGYLQNGFPDRALGVFRQMV 944
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 140/272 (51%), Positives = 184/272 (67%), Gaps = 14/272 (5%)
Query: 47 KSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADL------KEAT 100
KSSL+ KT++ Q LH LC+ S +LN AL+LL + N + KEA
Sbjct: 43 KSSLTSHTKTHSPILQRLH------NLCD-SGNLNDALNLLHSHAQNGTVSSSDISKEAI 95
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G+LL+ACGH K+I +G++VH LVSAS + ND +++TR+I MYS CG P DSR VFD+ K
Sbjct: 96 GILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAK 155
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
++LF +NAL+SG+++N L+ D +S+F+EL S T+L PDNFT PCV KAC G+ADV G
Sbjct: 156 EKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGE 215
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH +A K G D FV NALIAMYGKC FVE VK+FE M RNLVSWNS++ SENG
Sbjct: 216 AVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENG 275
Query: 281 FSCESFDLLIKMM-GCEEGFIPDVITVVTVLP 311
E + +++ EEG +PDV T+VTV+P
Sbjct: 276 GFGECCGVFKRLLISEEEGLVPDVATMVTVIP 307
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 132/234 (56%), Gaps = 7/234 (2%)
Query: 83 ALSLLQENLHNADLKEATGVL---LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
A+SL E L DL L +AC D+E+G+ VH L + FS+ F+ N L
Sbjct: 178 AISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNA-L 236
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL--SSDTELK 197
I MY CGF + +VF++++ RNL WN+++ ++N + + +F L S + L
Sbjct: 237 IAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLV 296
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
PD T VI AC + +V G VHG+A K+G+ +V V+N+L+ MY KC ++ E L
Sbjct: 297 PDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARAL 356
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
F++ +N+VSWN+II G+S+ G F+LL +M EE + +TV+ VLP
Sbjct: 357 FDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQR-EEKVRVNEVTVLNVLP 409
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 111/208 (53%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC ++ +G VH L + + + +N L+ MYS CG+ ++R +FD +
Sbjct: 305 VIPACAAVGEVRMGMVVHGL-AFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGK 363
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN ++ G++K + V + E+ + +++ + T V+ AC G + +
Sbjct: 364 NVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEI 423
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A + G + D V+NA +A Y KC+ ++ ++F M + + SWN++I ++NGF
Sbjct: 424 HGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFP 483
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+S DL + MM + G PD T+ ++L
Sbjct: 484 GKSLDLFLVMM--DSGMDPDRFTIGSLL 509
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 109/210 (51%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G LL AC K + GK +H + + ++FI L+++Y C L + +FD ++
Sbjct: 506 GSLLLACARLKFLRCGKEIHGFMLRNGLELDEFI-GISLMSLYIQCSSMLLGKLIFDKME 564
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
++L WN +++GF++NEL + L F ++ S +KP V+ AC ++ + G
Sbjct: 565 NKSLVCWNVMITGFSQNELPCEALDTFRQMLSGG-IKPQEIAVTGVLGACSQVSALRLGK 623
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH A K L D FV+ ALI MY KC +E+ +F+ + E++ WN II G+ +G
Sbjct: 624 EVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHG 683
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L M +G PD T + VL
Sbjct: 684 HGLKAIELFELMQ--NKGGRPDSFTFLGVL 711
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC E + K +H + F D ++ + Y+ C + RVF ++ +
Sbjct: 407 VLPACSGEHQLLSLKEIHGY-AFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGK 465
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNAL+ +N L +F+ + D+ + PD FT ++ AC + + G +
Sbjct: 466 TVSSWNALIGAHAQNGFPGKSLDLFLVMM-DSGMDPDRFTIGSLLLACARLKFLRCGKEI 524
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + GL D F+ +L+++Y +C+ + +F+ M ++LV WN +I GFS+N
Sbjct: 525 HGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELP 584
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
CE+ D +M+ G P I V VL
Sbjct: 585 CEALDTFRQML--SGGIKPQEIAVTGVL 610
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 17/182 (9%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
TGVL AC + +GK VH + S D + LI MY+ CG S+ +FD +
Sbjct: 607 TGVL-GACSQVSALRLGKEVHSF-ALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRV 664
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG-------G 212
++ WN +++G+ + + +F EL + +PD+FTF V+ AC G
Sbjct: 665 NEKDEAVWNVIIAGYGIHGHGLKAIELF-ELMQNKGGRPDSFTFLGVLIACNHAGLVTEG 723
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNS 271
+ +G ++G+ K+ V + M G+ + E +KL MP E + W+S
Sbjct: 724 LKYLGQMQNLYGVKPKLEHYACV------VDMLGRAGQLTEALKLVNEMPDEPDSGIWSS 777
Query: 272 II 273
++
Sbjct: 778 LL 779
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 270 bits (690), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 190/279 (68%), Gaps = 27/279 (9%)
Query: 45 KEKSSLSLSAKTNNA----STQGLHFLQEITTLCEESKSLNKALSLLQENLHNAD----- 95
+++SS + +NA ST HFL+ I+ CE + L+K+ ++QE + +
Sbjct: 21 RKESSFPRADYNSNAISSNSTNANHFLRRISNFCE-TGDLDKSFRVVQEFAGDDESSSDV 79
Query: 96 ---LKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDS 152
++EA G+LLQA G KDIE+G+++H LVS ST+ +D ++ TR+ITMY++CG P DS
Sbjct: 80 FLLVREALGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDS 139
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
R FD+L+++NLFQWNA++S +++NELY +VL +F+++ S T L PDNFTFPCVIKAC G
Sbjct: 140 RSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAG 199
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
I+DVG G VHG+ K GL+ D+FV NAL++ YG FV + +KLF++MPERNLVSWNS+
Sbjct: 200 ISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSM 259
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
I FS+N G + F+PDV TVVTVLP
Sbjct: 260 IRVFSDN--------------GDDGAFMPDVATVVTVLP 284
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 14/209 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC D+ IG VH LV T D + L++ Y GF D+ ++FD + R
Sbjct: 193 VIKACAGISDVGIGLAVHGLV-VKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPER 251
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL WN+++ F+ N D PD T V+ C ++G G GV
Sbjct: 252 NLVSWNSMIRVFSDN-------------GDDGAFMPDVATVVTVLPVCAREREIGVGKGV 298
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A K+ L ++ V+NAL+ MY K + + +F++ +N+VSWN+++ GFS G
Sbjct: 299 HGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDI 358
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+FDLL +M+ E D +T++ +P
Sbjct: 359 HGTFDLLRQMLAGSEDVKADEVTILNAVP 387
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 99/187 (52%), Gaps = 3/187 (1%)
Query: 124 SASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDV 183
S +F D ++ + Y+ CG ++RVF ++++ L WNAL+ G+ ++
Sbjct: 405 SLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLS 464
Query: 184 LSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIA 243
L +++ ++ L PDNFT ++ AC + + G VHG + L D+FV ++++
Sbjct: 465 LDAHLQMK-NSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLS 523
Query: 244 MYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
+Y C + + LF+ M + +LVSWN++I G +NGF + L +M+ G P
Sbjct: 524 LYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMV--LYGIQPCG 581
Query: 304 ITVVTVL 310
I+++TV
Sbjct: 582 ISMMTVF 588
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC K + +GK VH + D + ++++Y CG + +FD+++
Sbjct: 486 LLSACSKLKSLRLGKEVHGFI-IRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDN 544
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN +++G +N L +F ++ ++P + V AC + + G
Sbjct: 545 SLVSWNTVITGHLQNGFPERALGLFRQMVL-YGIQPCGISMMTVFGACSLLPSLRLGREA 603
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K L + F++ ++I MY K + + K+F + E++ SWN++I G+ +G +
Sbjct: 604 HAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRA 663
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M G PD +T + VL
Sbjct: 664 KEAIKLFEEMQ--RTGRNPDDLTFLGVL 689
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/298 (43%), Positives = 193/298 (64%), Gaps = 21/298 (7%)
Query: 26 PQFPATVIQRNKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALS 85
PQ R H +KS++ + ++ ST G H L+ ++ LCE L
Sbjct: 9 PQLSTLFDSRRSH-------KKSTIPRAVAVSSTSTNGEHLLRRVSGLCETGNPPQGVLQ 61
Query: 86 LLQENLHNADLKEATGVLL----------QACGHEKDIEIGKRVHELVSASTQFSNDFII 135
+++E + + K ++ L QA G KDI++G+++H+LVS S + SND ++
Sbjct: 62 VIEE--FDREEKSSSDAFLLLREALGLLLQASGRRKDIQLGRKIHQLVSESARLSNDDVL 119
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
TR+ITMYS+CG P DSR VFD+L+ +NLFQWNA++S +++NELY +VL +FV++ +++
Sbjct: 120 CTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESG 179
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
L PDNFTFPCV+KAC G+++V G VHG+ K L+ DVFVSNAL++ YG V + +
Sbjct: 180 LLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDAL 239
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEE--GFIPDVITVVTVLP 311
++F++MPERNLVSWNS+I FS+NG S E F LL +MM ++ F PDV T+ TVLP
Sbjct: 240 RVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLP 297
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 115/212 (54%), Gaps = 4/212 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC ++++G VH LV T+ D ++ L++ Y G D+ RVF + R
Sbjct: 190 VVKACAGVSEVQVGLAVHGLV-VKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPER 248
Query: 163 NLFQWNALVSGFTKNELYTD---VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
NL WN+++ F+ N L + +L +E + PD T V+ C ++G G
Sbjct: 249 NLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVG 308
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
GVHG+A K+ L +V V+NAL+ MY KC + + +F++ +N+VSWN+++ GFS
Sbjct: 309 KGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAA 368
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G ++FDLL +M+ D +T++ +P
Sbjct: 369 GDIHKTFDLLRQMLAGGGDLRADEVTILNAVP 400
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 107/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC K +++GK VH L+ + D + L+++Y CG + +FD+++ +
Sbjct: 500 LLSACSQIKSLKLGKEVHGLI-IRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDK 558
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
L WN +V+G+ +N LS+F ++ ++P + V AC + + G
Sbjct: 559 TLVSWNTMVNGYLQNGFPERALSLFRQMVL-YGVQPCEISMMSVFGACSLLPSLRLGREA 617
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A K L + F++ ++I MY K V E K+F + ER++ SWN+++ G+ +G +
Sbjct: 618 HGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRA 677
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M G PD +T + VL
Sbjct: 678 KEAIKLFEEMQ--RTGHCPDELTFLGVL 703
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 5/218 (2%)
Query: 80 LNKALSLLQENLHNA-DLKEATGVLLQA---CGHEKDIEIGKRVHELVSASTQFSNDFII 135
++K LL++ L DL+ +L A C E + K +H N+ ++
Sbjct: 371 IHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELV 430
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
+ Y+ CG + RVF S++++ + WNAL+ G++++ L + ++ S +
Sbjct: 431 ANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKS-SG 489
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
L PD FT ++ AC I + G VHG+ + L D FV +L+++Y C +
Sbjct: 490 LLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAH 549
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
LF+ M ++ LVSWN+++ G+ +NGF + L +M+
Sbjct: 550 VLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMV 587
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/268 (49%), Positives = 176/268 (65%), Gaps = 14/268 (5%)
Query: 50 LSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLH------NADLKEATGVL 103
+S K NAS HF LC + +LN+A + LQ NL+ N+ K+ G+L
Sbjct: 48 ISSHKKQQNASK---HF----HNLCN-TGNLNQAFNFLQSNLNDVVSSSNSKPKQLIGLL 99
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
LQ CG K+IEIG+++H +S S F ND ++ TRL+TMYS+C P DS VF++ + +N
Sbjct: 100 LQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKN 159
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
LF WNAL+SG+ +N L+ D + +FVE+ S TE PDNFT PCVIKAC G+ DV G VH
Sbjct: 160 LFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVH 219
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G A K ++ DVFV NALIAMYGK FVE VK+F+ MP+RNLVSWNS++ ENG
Sbjct: 220 GFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFE 279
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVLP 311
ES+ L ++ +EG +PDV T+VTV+P
Sbjct: 280 ESYGLFKGLLNGDEGLMPDVATMVTVIP 307
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 118/210 (56%), Gaps = 4/210 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC D+ +G+ VH + S+ F+ N LI MY GF + +VFD + R
Sbjct: 202 VIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNA-LIAMYGKFGFVESAVKVFDKMPQR 260
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVEL-SSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
NL WN+++ +N ++ + +F L + D L PD T VI C +V G
Sbjct: 261 NLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMV 320
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
HG+A K+GL G++ V+++L+ MY KC ++ E LF+ E+N++SWNS+I G+S++
Sbjct: 321 FHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDT-NEKNVISWNSMIGGYSKDRD 379
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+F+LL KM E+ + +T++ VLP
Sbjct: 380 FRGAFELLRKMQ-MEDKVKVNEVTLLNVLP 408
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 110/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC K + GK +H + F D I L+++Y CG L ++ FD+++ +
Sbjct: 508 LLSACARLKSLSCGKEIHGSM-LRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEK 566
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL WN +++GF++NE D L +F ++ S +++ PD + + AC ++ + G +
Sbjct: 567 NLVCWNTMINGFSQNEFPFDALDMFHQMLS-SKIWPDEISIIGALGACSQVSALRLGKEL 625
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K L FV+ +LI MY KC +E+ +F+ + + V+WN +I G+ +G
Sbjct: 626 HCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHG 685
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L M GF PD +T + +L
Sbjct: 686 RKAIELFKSMQNA--GFRPDSVTFIALL 711
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 102/208 (49%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C E K +H +D ++ + Y+ CG + VF ++++
Sbjct: 406 VLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESK 465
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNAL+ G +N L +++ L + L+PD FT ++ AC + + G +
Sbjct: 466 MVSSWNALIGGHVQNGFPRKALDLYL-LMRGSGLEPDLFTIASLLSACARLKSLSCGKEI 524
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + G D F+ +L+++Y +C + F+ M E+NLV WN++I GFS+N F
Sbjct: 525 HGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFP 584
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ D+ +M+ + PD I+++ L
Sbjct: 585 FDALDMFHQMLSSK--IWPDEISIIGAL 610
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/136 (64%), Positives = 105/136 (77%)
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+NELY+D + +FV+L +DTE DNFTFPCVIKAC G D G G +HGM KMGL+ DV
Sbjct: 7 RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDV 66
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
FV NALIAMYGK FV+ VK+F MP RNLVSWNSII GFSENGFS + FD+L++MM
Sbjct: 67 FVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAG 126
Query: 296 EEGFIPDVITVVTVLP 311
EEG +PD+ T+VTVLP
Sbjct: 127 EEGLLPDIATLVTVLP 142
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 115/210 (54%), Gaps = 3/210 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC D +G+ +H +V + F+ N LI MY GF + +VF + R
Sbjct: 37 VIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNA-LIAMYGKFGFVDAAVKVFHYMPVR 95
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTE-LKPDNFTFPCVIKACGGIADVGFGSG 221
NL WN+++SGF++N D + VE+ + E L PD T V+ C DV G
Sbjct: 96 NLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIR 155
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG+A K+GL DV V+N+L+ MY KC ++ E LF+ +N VSWN++I G G+
Sbjct: 156 IHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGY 215
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+F+L + M +E + +TV+ +LP
Sbjct: 216 IFEAFNLF-REMQMQEDIEVNEVTVLNILP 244
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 122/239 (51%), Gaps = 6/239 (2%)
Query: 74 CEESKSLNKALSLLQENLHNADLKE--ATGVLLQACGHEKDIEIGKRVHELVSASTQFSN 131
C ++ KAL+L + ++ + + G LL A H K + GK VH V
Sbjct: 312 CAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFV-LRHGLEI 370
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I L+++Y CG +R +FD ++ ++ WNA++SG+++N L D L +F +L
Sbjct: 371 DSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLV 430
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
SD +P + V+ AC + + G H A K L+ DVFV+ + I MY K +
Sbjct: 431 SDG-FQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCI 489
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+E +F+ + ++L SWN+II + +G ES +L +M + G +PD T + +L
Sbjct: 490 KESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMR--KVGQMPDGFTFIGIL 546
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 106/208 (50%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C E D+++G R+H L + S D +N L+ MYS CG+ +++ +FD +
Sbjct: 140 VLPVCAREVDVQMGIRIHGL-AVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRK 198
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WN ++ G + ++F E+ +++ + T ++ AC I+ + +
Sbjct: 199 NAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKEL 258
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + + G D V+N +A Y KC + ++F M + + SWN++I G ++NG
Sbjct: 259 HGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDP 318
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L I+M G +PD T+ ++L
Sbjct: 319 RKALNLYIQM--TYSGLVPDWFTIGSLL 344
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 110/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + K +H S F D ++ + Y+ CG + + RVF S++T+
Sbjct: 242 ILPACLEISQLRSLKELHGY-SIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETK 300
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNAL+ G +N L+++++++ + L PD FT ++ A + + +G V
Sbjct: 301 TVNSWNALIGGCAQNGDPRKALNLYIQMTY-SGLVPDWFTIGSLLLASAHLKSLRYGKEV 359
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + GL D F+ +L+++Y C LF+ M E++ VSWN++I G+S+NG
Sbjct: 360 HGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLP 419
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L K++ +GF P I VV+VL
Sbjct: 420 EDALILFRKLV--SDGFQPSDIAVVSVL 445
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 147/263 (55%), Gaps = 9/263 (3%)
Query: 52 LSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLK---EATGVLLQACG 108
L K N + + I++LC++ L +++ LL E + D + E G LLQ C
Sbjct: 1128 LQEKDENRRSLYKSYFHHISSLCKDGH-LQESVHLLSE-MEFEDFQIGPEIYGELLQGCV 1185
Query: 109 HEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQW 167
+E+ + G+++H ++ F+ + + T+L+ Y+ C FP + R+F L+ RN+F W
Sbjct: 1186 YERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSW 1245
Query: 168 NALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAA 227
A+V + D L F+E+ + PDNF P V+KACG + +G G GVHG
Sbjct: 1246 AAIVGLQCRMGFSEDALLGFIEMQENGVF-PDNFVLPNVLKACGSLQLIGLGKGVHGYVL 1304
Query: 228 KMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFD 287
KMG VFVS++L+ MYGKC +E+ K+F+ M E+N+V+WNS+I G+ +NG + E+ D
Sbjct: 1305 KMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAID 1364
Query: 288 LLIKMMGCEEGFIPDVITVVTVL 310
+ M EG P +TV + L
Sbjct: 1365 VFYDMR--VEGIEPTRVTVASFL 1385
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 93/177 (52%), Gaps = 2/177 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG + I +GK VH V F +++ L+ MY CG D+R+VFDS+ +
Sbjct: 1283 VLKACGSLQLIGLGKGVHGYV-LKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEK 1341
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN+++ G+ +N L + + +F ++ + ++P T + A + + G
Sbjct: 1342 NVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEG-IEPTRVTVASFLSASANLDALIEGKQG 1400
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
H +A L D + +++I Y K +E+ +F M E+++V+WN +I + ++
Sbjct: 1401 HAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQH 1457
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 98/195 (50%), Gaps = 4/195 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK+ H ++ D I+ + +I YS G D+ VF + +++ WN L+S +
Sbjct: 1397 GKQGHA-IAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYV 1455
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
++ L++ L L+ D+ T ++ A +++ G H + L DV
Sbjct: 1456 QHHQVGKALNM-CHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDV 1514
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
V+N++I MY KC +++ K+F+ ER+LV WN+++ +++ G S E+ L +M
Sbjct: 1515 VVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQF- 1573
Query: 296 EEGFIPDVITVVTVL 310
+ P+VI+ +V+
Sbjct: 1574 -DSVPPNVISWNSVI 1587
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 75/148 (50%), Gaps = 3/148 (2%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL W L+SG ++ + + +F + + ++P + V+ AC I + +G +
Sbjct: 1614 NLITWTTLISGLAQSGFGYEAI-LFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAI 1672
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + V V+ +L+ MY KC ++E K+F +M + L +N++I ++ +G +
Sbjct: 1673 HGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQA 1732
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L + +EG PD IT ++L
Sbjct: 1733 VEALALFKHLQ--KEGIEPDSITFTSIL 1758
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 100/237 (42%), Gaps = 45/237 (18%)
Query: 78 KSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
K+LN + ENL + ++ +L A +I++GK H +D ++
Sbjct: 1462 KALNMCHLMRSENLRFDSVTLSS--ILSASAVTSNIKLGKEGH-CYCIRRNLESDVVVAN 1518
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
+I MY+ C D+R+VFDS R+L WN L++ + + L + L +F ++ D+
Sbjct: 1519 SIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDS--V 1576
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
P N V N++I + + V E +
Sbjct: 1577 PPN----------------------------------VISWNSVILGFLRNGQVNEAKDM 1602
Query: 258 FEVMP----ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F M + NL++W ++I G +++GF E+ KM E G P + ++ +VL
Sbjct: 1603 FSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQ--EAGIRPSIASITSVL 1657
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 88/183 (48%), Gaps = 16/183 (8%)
Query: 87 LQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC 146
+QE + T VLL AC + G+ +H ++ +F + T L+ MY+ C
Sbjct: 1641 MQEAGIRPSIASITSVLL-ACTDIPSLWYGRAIHGFITRH-EFCLSVPVATSLVDMYAKC 1698
Query: 147 GFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCV 206
G ++++VF + ++ L +NA++S + + + L++F L + ++PD+ TF +
Sbjct: 1699 GSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEG-IEPDSITFTSI 1757
Query: 207 IKAC--GGIADVG---FGSGV--HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
+ AC G+ + G F V H M M G V +++ +C ++E ++L
Sbjct: 1758 LSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCV------VSLLSRCGNLDEALRLIL 1811
Query: 260 VMP 262
MP
Sbjct: 1812 TMP 1814
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 147/263 (55%), Gaps = 9/263 (3%)
Query: 52 LSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLK---EATGVLLQACG 108
L K N + + I++LC++ L +++ LL E + D + E G LLQ C
Sbjct: 33 LQEKDENRRSLYKSYFHHISSLCKDGH-LQESVHLLSE-MEFEDFQIGPEIYGELLQGCV 90
Query: 109 HEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQW 167
+E+ + G+++H ++ F+ + + T+L+ Y+ C FP + R+F L+ RN+F W
Sbjct: 91 YERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSW 150
Query: 168 NALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAA 227
A+V + D L F+E+ + PDNF P V+KACG + +G G GVHG
Sbjct: 151 AAIVGLQCRMGFSEDALLGFIEMQENGVF-PDNFVLPNVLKACGSLQLIGLGKGVHGYVL 209
Query: 228 KMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFD 287
KMG VFVS++L+ MYGKC +E+ K+F+ M E+N+V+WNS+I G+ +NG + E+ D
Sbjct: 210 KMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAID 269
Query: 288 LLIKMMGCEEGFIPDVITVVTVL 310
+ M EG P +TV + L
Sbjct: 270 VFYDMR--VEGIEPTRVTVASFL 290
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 93/177 (52%), Gaps = 2/177 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG + I +GK VH V F +++ L+ MY CG D+R+VFDS+ +
Sbjct: 188 VLKACGSLQLIGLGKGVHGYV-LKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEK 246
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN+++ G+ +N L + + +F ++ + ++P T + A + + G
Sbjct: 247 NVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEG-IEPTRVTVASFLSASANLDALIEGKQG 305
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
H +A L D + +++I Y K +E+ +F M E+++V+WN +I + ++
Sbjct: 306 HAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQH 362
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 92/179 (51%), Gaps = 3/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I+ + +I YS G D+ VF + +++ WN L+S + ++ L++ L
Sbjct: 317 DNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNM-CHLM 375
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
L+ D+ T ++ A +++ G H + L DV V+N++I MY KC +
Sbjct: 376 RSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERI 435
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ K+F+ ER+LV WN+++ +++ G S E+ L +M + P+VI+ +V+
Sbjct: 436 DDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQF--DSVPPNVISWNSVI 492
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 75/148 (50%), Gaps = 3/148 (2%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL W L+SG ++ + + +F + + ++P + V+ AC I + +G +
Sbjct: 519 NLITWTTLISGLAQSGFGYEAI-LFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAI 577
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + V V+ +L+ MY KC ++E K+F +M + L +N++I ++ +G +
Sbjct: 578 HGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQA 637
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L + +EG PD IT ++L
Sbjct: 638 VEALALFKHLQ--KEGIEPDSITFTSIL 663
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 100/237 (42%), Gaps = 45/237 (18%)
Query: 78 KSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
K+LN + ENL + ++ +L A +I++GK H +D ++
Sbjct: 367 KALNMCHLMRSENLRFDSVTLSS--ILSASAVTSNIKLGKEGH-CYCIRRNLESDVVVAN 423
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
+I MY+ C D+R+VFDS R+L WN L++ + + L + L +F ++ D+
Sbjct: 424 SIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDS--V 481
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
P N V N++I + + V E +
Sbjct: 482 PPN----------------------------------VISWNSVILGFLRNGQVNEAKDM 507
Query: 258 FEVMP----ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F M + NL++W ++I G +++GF E+ KM E G P + ++ +VL
Sbjct: 508 FSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQ--EAGIRPSIASITSVL 562
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 86/177 (48%), Gaps = 4/177 (2%)
Query: 87 LQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC 146
+QE + T VLL AC + G+ +H ++ +F + T L+ MY+ C
Sbjct: 546 MQEAGIRPSIASITSVLL-ACTDIPSLWYGRAIHGFIT-RHEFCLSVPVATSLVDMYAKC 603
Query: 147 GFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCV 206
G ++++VF + ++ L +NA++S + + + L++F L + ++PD+ TF +
Sbjct: 604 GSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEG-IEPDSITFTSI 662
Query: 207 IKACGGIADVGFGSGVHG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ AC V G + M +K + + ++++ +C ++E ++L MP
Sbjct: 663 LSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMP 719
>gi|347954472|gb|AEP33736.1| chlororespiratory reduction 21, partial [Raphanus sativus]
Length = 806
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 147/249 (59%), Gaps = 8/249 (3%)
Query: 66 FLQEITTLCEESKSLNKALSLLQE-NLHNADL-KEATGVLLQACGHEKDIEIGKRVHELV 123
+ +++LC+ + + +ALSL+ E + N + E G +LQ C +E+D G+++H +
Sbjct: 12 YFHRVSSLCKNGE-IREALSLVTEMDFRNVRIGPEIYGEILQGCVYERDFHTGRQIHARI 70
Query: 124 SASTQF-SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTD 182
+ +F + + I T+L+ Y+ C + +F L+ RN+F W A++ + L
Sbjct: 71 LKNGEFYAKNEYIETKLVIFYAKCDAHEIAETLFSKLRVRNVFSWAAIIGVKCRVGLAEG 130
Query: 183 VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD-VFVSNAL 241
L FVE+ D E+ PDNF P V KACG + GFG G+HG AK GL GD VFV+++L
Sbjct: 131 ALMGFVEMLKD-EIFPDNFVVPNVCKACGALQWSGFGRGIHGYVAKSGLYGDCVFVASSL 189
Query: 242 IAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIP 301
MYGKC +++ K+F+ +PERN+V+WN+++ G+ +NG + E+ L+ M EEG P
Sbjct: 190 ADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMR--EEGVEP 247
Query: 302 DVITVVTVL 310
+TV T L
Sbjct: 248 TRVTVSTCL 256
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 91/190 (47%), Gaps = 4/190 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK+ H V+ D I+ T ++ Y G + VFD + +++ WN L+SG+
Sbjct: 268 GKQSHA-VAVVNGLEMDNILGTSVLNFYCKVGLIEYAEMVFDRMIGKDVVTWNLLISGYV 326
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+ L D + + +L +LK D T ++ A + G V + D+
Sbjct: 327 QQGLVEDAIRM-CKLMRLEKLKFDCVTLSTLMSAAARTQNSKLGKEVQCYCIRHSFESDI 385
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+++ +I MY KC + + ++F+ +++L+ WN+++ ++E+G S E+ L +M
Sbjct: 386 GLASTVIDMYAKCGSIVDAKRVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQ-- 443
Query: 296 EEGFIPDVIT 305
E P+ IT
Sbjct: 444 LESVPPNAIT 453
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 35/208 (16%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ A ++ ++GK V + F +D + + +I MY+ CG +D++RVFDS +
Sbjct: 356 LMSAAARTQNSKLGKEV-QCYCIRHSFESDIGLASTVIDMYAKCGSIVDAKRVFDSTVQK 414
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN L++ + ++ L + L +F E+ ++ + P+ T+ +I + F +G
Sbjct: 415 DLILWNTLLAAYAESGLSGEALRLFYEMQLES-VPPNAITWNLIILSL-------FRNGQ 466
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
A +M L ++ ++P LVSW +++ G +NG S
Sbjct: 467 VDEAKEMFL----------------------QMQSSGIVP--TLVSWTTMMNGLVQNGCS 502
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L KM E G P+V ++ L
Sbjct: 503 EEAVHYLRKMQ--ESGLRPNVFSITVAL 528
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 2/164 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V L AC + + +G+ VH + + S+ I T LI MY+ CG + +VF
Sbjct: 526 VALSACANLASLHLGRSVHGYIIRNQLHSSSVSIETALIDMYAKCGDISKAEKVFKRKSY 585
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
L +NA++S + + + + ++ L D +KPDN TF V+ AC D+
Sbjct: 586 SELPLFNAMISAYALSGNVKEAIDLYRSL-EDMGIKPDNITFTNVLSACNHAGDINQAIE 644
Query: 222 V-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
+ M +K G+ + ++ + E+ ++L E MP +
Sbjct: 645 IFSDMVSKHGMEPCLEHYGLMVDLLASAGETEKALRLMEEMPYK 688
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 4/148 (2%)
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L W +++G +N + + ++ ++ L+P+ F+ + AC +A + G VH
Sbjct: 486 LVSWTTMMNGLVQNGCSEEAVH-YLRKMQESGLRPNVFSITVALSACANLASLHLGRSVH 544
Query: 224 GMAAKMGL-IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
G + L V + ALI MY KC + + K+F+ L +N++I ++ +G
Sbjct: 545 GYIIRNQLHSSSVSIETALIDMYAKCGDISKAEKVFKRKSYSELPLFNAMISAYALSGNV 604
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL + + G PD IT VL
Sbjct: 605 KEAIDLYRSLE--DMGIKPDNITFTNVL 630
>gi|449460860|ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic-like [Cucumis sativus]
Length = 489
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 141/237 (59%), Gaps = 8/237 (3%)
Query: 78 KSLNKALSLLQENLHNADL--KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
++L+ L+ L+ ++ N E LL+ C + I G R+H L+ + + I
Sbjct: 33 QALDAVLTDLEASIDNGLFIDPEIFSSLLELCYQLQAIHHGIRIHRLIPTNL-LRRNVGI 91
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNL--FQWNALVSGFTKNELYTDVLSIFVELSSD 193
+++L+ +Y+ G+ D+ +VFD + RN F WN+L+SG+ + LY D L+++ ++ +
Sbjct: 92 SSKLLRLYASFGYMEDAHQVFDEMGNRNFSAFAWNSLISGYAELGLYEDALALYFQMEEE 151
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
++PDNFTFP V+KACGGI + G VH + G GDVFV NAL+ MY KC +
Sbjct: 152 G-VEPDNFTFPRVLKACGGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIVR 210
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F+ + +++VSWNS++ G++ +G E+ D+ +M+ +EG+ PD + + T+L
Sbjct: 211 ARKVFDQIEYKDIVSWNSMLTGYTRHGLHFEALDIFDQMI--QEGYEPDSVALSTLL 265
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 119/208 (57%), Gaps = 10/208 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG I+IG+ VH V S F+ D + L+ MYS CG + +R+VFD ++ +
Sbjct: 163 VLKACGGIGSIQIGEAVHRHVVRSG-FAGDVFVLNALVDMYSKCGCIVRARKVFDQIEYK 221
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN++++G+T++ L+ + L IF ++ + +PD+ ++ I+ + F +
Sbjct: 222 DIVSWNSMLTGYTRHGLHFEALDIFDQMIQEG-YEPDSVALSTLLS---NISSMKFKLHI 277
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + G+ ++ ++N+LI MY KC + LF+ MP++++VSWNSII + +
Sbjct: 278 HGWVIRHGVEWNLSIANSLIVMYAKCGKLNRAKWLFQQMPQKDMVSWNSIISAHFNSAEA 337
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+++ + G PD +T V++L
Sbjct: 338 LTYFEVMESL-----GVSPDGVTFVSLL 360
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 7/125 (5%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG-FTKNELYTDVLSIFVELSSD 193
I LI MY+ CG ++ +F + +++ WN+++S F E T + E+
Sbjct: 292 IANSLIVMYAKCGKLNRAKWLFQQMPQKDMVSWNSIISAHFNSAEALT-----YFEVMES 346
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHG-MAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ PD TF ++ C + V G ++ M K G+ + ++ +YG+ +E
Sbjct: 347 LGVSPDGVTFVSLLSTCAHLGLVKEGGKLYFLMKGKYGIRPTIEHYACMVNLYGRAGMIE 406
Query: 253 EMVKL 257
E K+
Sbjct: 407 EAYKI 411
>gi|449499688|ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g25270, chloroplastic-like [Cucumis sativus]
Length = 489
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 141/237 (59%), Gaps = 8/237 (3%)
Query: 78 KSLNKALSLLQENLHNADL--KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
++L+ L+ L+ ++ N E LL+ C + I G R+H L+ + + I
Sbjct: 33 QALDAVLTDLEASIDNGLFIDPEIFSSLLELCYQLQAIHHGIRIHRLIPTNL-LRRNVGI 91
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNL--FQWNALVSGFTKNELYTDVLSIFVELSSD 193
+++L+ +Y+ G+ D+ +VFD + RN F WN+L+SG+ + LY D L+++ ++ +
Sbjct: 92 SSKLLRLYASFGYMEDAHQVFDEMGNRNFSAFAWNSLISGYAELGLYEDALALYFQMEEE 151
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
++PDNFTFP V+KACGGI + G VH + G GDVFV NAL+ MY KC +
Sbjct: 152 G-VEPDNFTFPRVLKACGGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIVR 210
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F+ + +++VSWNS++ G++ +G E+ D+ +M+ +EG+ PD + + T+L
Sbjct: 211 ARKVFDQIEYKDIVSWNSMLTGYTRHGLHFEALDIFDQMI--QEGYEPDSVALSTLL 265
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 119/208 (57%), Gaps = 10/208 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG I+IG+ VH V S F+ D + L+ MYS CG + +R+VFD ++ +
Sbjct: 163 VLKACGGIGSIQIGEAVHRHVVRSG-FAGDVFVLNALVDMYSKCGCIVRARKVFDQIEYK 221
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN++++G+T++ L+ + L IF ++ + +PD+ ++ I+ + F +
Sbjct: 222 DIVSWNSMLTGYTRHGLHFEALDIFDQMIQEG-YEPDSVALSTLLS---NISSMKFKLHI 277
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + G+ ++ ++N+LI MY KC + LF+ MP++++VSWNSII + +
Sbjct: 278 HGWVIRHGVEWNLSIANSLIVMYAKCGKLNRAKWLFQQMPQKDMVSWNSIISAHFNSAEA 337
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+++ + G PD +T V++L
Sbjct: 338 LTYFEVMESL-----GVSPDGVTFVSLL 360
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 7/125 (5%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG-FTKNELYTDVLSIFVELSSD 193
I LI MY+ CG ++ +F + +++ WN+++S F E T + E+
Sbjct: 292 IANSLIVMYAKCGKLNRAKWLFQQMPQKDMVSWNSIISAHFNSAEALT-----YFEVMES 346
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHG-MAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ PD TF ++ C + V G ++ M K G+ + ++ +YG+ +E
Sbjct: 347 LGVSPDGVTFVSLLSTCAHLGLVKEGXELYFLMKGKYGIRPTIEHYACMVNLYGRAGMIE 406
Query: 253 EMVKL 257
E K+
Sbjct: 407 EAYKI 411
>gi|347954458|gb|AEP33729.1| chlororespiratory reduction 21, partial [Brassica rapa]
Length = 788
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 141/242 (58%), Gaps = 9/242 (3%)
Query: 73 LCEESKSLNKALSLLQE-NLHNADL-KEATGVLLQACGHEKDIEIGKRVHELVSASTQF- 129
LC+ + + +ALSL+ E + N + E G +LQ C +E+D G+++H + + F
Sbjct: 1 LCKNGE-IKEALSLVTEMDFRNVRIGPEIYGEILQGCVYERDFHTGQQIHARILKNGDFY 59
Query: 130 -SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
N++I T+L+ Y+ C + +F L+ RN+F W A++ + L L FV
Sbjct: 60 AKNEYI-ETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRMGLVEGALMGFV 118
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
E+ D E+ PDNF P V KACG + GFG GVHG AK GL VFV+++L MYGKC
Sbjct: 119 EMLKD-EIFPDNFVVPNVCKACGALQWRGFGRGVHGYVAKSGLDDCVFVASSLADMYGKC 177
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
+++ K+F+ +PERN+V+WN+++ G+ +NG + E+ L+ M EEG P +TV T
Sbjct: 178 GVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMR--EEGVEPTRVTVST 235
Query: 309 VL 310
L
Sbjct: 236 CL 237
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 4/202 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L A + +E GK+ H L + D I+ T ++ Y G + VFD + ++
Sbjct: 237 LSASANMGGVEEGKQSHAL-AVVNGLELDNILGTSVLNFYCKVGLVEYAEMVFDRMVGKD 295
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN L+SG+ + L D + + +L +LK D T ++ + G V
Sbjct: 296 VVTWNLLISGYVQQGLVEDAIRM-CKLMRLEKLKFDCVTLSTLMSTAARTQNSKLGKEVQ 354
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ D+ +++ + MY KC + + K+F+ +++L+ WN+++ ++E+G S
Sbjct: 355 CYCIRHSFESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLAAYAESGLSG 414
Query: 284 ESFDLLIKMMGCEEGFIPDVIT 305
E+ L +M E P+VIT
Sbjct: 415 EALRLFYEMQ--LESVPPNVIT 434
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 43/212 (20%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ ++ ++GK V + F +D ++ + + MY+ CG +D+++VFDS +
Sbjct: 337 LMSTAARTQNSKLGKEV-QCYCIRHSFESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQK 395
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN L++ + ++ L + L +F E+ ++ + P+ T+
Sbjct: 396 DLILWNTLLAAYAESGLSGEALRLFYEMQLES-VPPNVITW------------------- 435
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER----NLVSWNSIICGFSE 278
N +I + V+E K+F M +VSW +++ G +
Sbjct: 436 ----------------NLIILSLLRNGQVDEAKKMFLQMQSSGIVPTIVSWTTMMNGLVQ 479
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
NG S E+ L KM E G P+V ++ L
Sbjct: 480 NGCSEEAIHYLRKMQ--EYGMRPNVFSITVAL 509
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 2/162 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V L AC + + G+ VH + + S+ I T L+ MY+ CG + +VF
Sbjct: 507 VALSACANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKVFRRKLF 566
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
L +NA++S + + ++++ L D +KPDN TF ++ AC D+
Sbjct: 567 SELPLYNAMISAYALYGNVEEAMALYRSL-DDMGIKPDNITFTNILSACNHAGDINQAIE 625
Query: 222 V-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ M +K G+ + ++ + E+ ++L E MP
Sbjct: 626 IFSDMVSKHGVKPCLEHYGLMVDLLASAGETEKALRLMEEMP 667
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 67/148 (45%), Gaps = 4/148 (2%)
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W +++G +N + + ++ + ++P+ F+ + AC +A + FG VH
Sbjct: 467 IVSWTTMMNGLVQNGCSEEAIH-YLRKMQEYGMRPNVFSITVALSACANLASLHFGRSVH 525
Query: 224 GMAAKMGL-IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
G + L V + +L+ MY KC + + K+F L +N++I ++ G
Sbjct: 526 GYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKVFRRKLFSELPLYNAMISAYALYGNV 585
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L + + G PD IT +L
Sbjct: 586 EEAMALYRSLD--DMGIKPDNITFTNIL 611
>gi|347954470|gb|AEP33735.1| chlororespiratory reduction 21, partial [Olimarabidopsis pumila]
Length = 811
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 141/248 (56%), Gaps = 7/248 (2%)
Query: 66 FLQEITTLCEESKSLNKALSLLQE-NLHNADL-KEATGVLLQACGHEKDIEIGKRVHELV 123
+ +++LC+ + + +ALSL+ E + N + E G LQ C +E+D+ GK++H +
Sbjct: 18 YFHRVSSLCKNGE-IKEALSLVTEMDFRNXRIGPEIYGEXLQGCVYERDLSTGKQIHARI 76
Query: 124 SASTQF-SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTD 182
+ F + + I T+L+ Y+ C + +F L+ RN+F W A++ + L
Sbjct: 77 LKNGDFYARNEYIETKLVIFYAKCDALEXAEVIFSKLRVRNVFSWAAIIGVKCRIGLCEG 136
Query: 183 VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALI 242
L FVE+ + E+ PDNF P V KACG + FG GVHG K GL VFV+++L
Sbjct: 137 ALMGFVEML-ENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVIKAGLEDCVFVASSLA 195
Query: 243 AMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
MYGKC +++ K+F+ +PERN+V+WN+++ G+ +NG + E+ L M +EG P
Sbjct: 196 DMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMR--KEGVEPT 253
Query: 303 VITVVTVL 310
+TV T L
Sbjct: 254 RVTVSTCL 261
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 99/202 (49%), Gaps = 4/202 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L A + +E GK+ H ++ D I+ T L+ Y G + VFD + ++
Sbjct: 261 LSASANMVGVEEGKQSHA-IAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRMFDKD 319
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN L+SG+ + L D + + +L +LK D T ++ A ++ FG V
Sbjct: 320 VVTWNLLISGYVQQGLVEDAIYM-SQLMRLEKLKYDCVTLSTLMSAAARTENLKFGKEVQ 378
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ L D+ +++ + MY KC + + K+F+ E++L+ WN+++ ++++G S
Sbjct: 379 CYCIRHSLDTDIVLASTTMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAQSGLSG 438
Query: 284 ESFDLLIKMMGCEEGFIPDVIT 305
E+ L +M E P+VIT
Sbjct: 439 EALRLFYEMQ--LESVPPNVIT 458
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 2/164 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V L A + + G+ +H + + + S+ I T L+ MY+ CG + RVF S
Sbjct: 531 VALSASANLASLHFGRSIHGYIIRNLRHSSSVSIETSLVDMYAKCGDINKAERVFGSKLY 590
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
L +NA++S + + ++++ L D +KPD+ TF ++ AC D+ G
Sbjct: 591 SELPLYNAMISAYALYGNVKEAIALYRSL-EDMGIKPDSVTFTSLLSACNHAGDIDQAVG 649
Query: 222 VH-GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
V M K G+ + ++ + E+ ++L E MP +
Sbjct: 650 VFTAMVLKHGMTPCLEHYGLMVDLLASAGETEKAIRLIEEMPYK 693
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL W +++G +N + + +F+ ++ L+P+ F+ + A +A + FG +
Sbjct: 490 NLISWTTMMNGMVQNGCSEEAI-LFLRKMQESGLRPNAFSITVALSASANLASLHFGRSI 548
Query: 223 HGMAAK-MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
HG + + V + +L+ MY KC + + ++F L +N++I ++ G
Sbjct: 549 HGYIIRNLRHSSSVSIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGN 608
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L + + G PD +T ++L
Sbjct: 609 VKEAIALYRSLE--DMGIKPDSVTFTSLL 635
>gi|15234984|ref|NP_194257.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75265547|sp|Q9SB36.1|PP337_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g25270, chloroplastic; Flags: Precursor
gi|4454015|emb|CAA23068.1| putative protein [Arabidopsis thaliana]
gi|7269378|emb|CAB81338.1| putative protein [Arabidopsis thaliana]
gi|332659633|gb|AEE85033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 124/210 (59%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C + I+ G RVH L+ N+ I+++L+ +Y+ CG+ + VFD + R
Sbjct: 98 LLETCYSLRAIDHGVRVHHLIPPYL-LRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKR 156
Query: 163 NL--FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ F WN+L+SG+ + Y D ++++ +++ D +KPD FTFP V+KACGGI V G
Sbjct: 157 DSSPFAWNSLISGYAELGQYEDAMALYFQMAEDG-VKPDRFTFPRVLKACGGIGSVQIGE 215
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H K G DV+V NAL+ MY KC + + +F+++P ++ VSWNS++ G+ +G
Sbjct: 216 AIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHG 275
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ D+ M+ + G PD + + +VL
Sbjct: 276 LLHEALDIFRLMV--QNGIEPDKVAISSVL 303
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 12/209 (5%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+ACG ++IG+ +H +LV F D + L+ MY+ CG + +R VFD +
Sbjct: 201 VLKACGGIGSVQIGEAIHRDLVKEG--FGYDVYVLNALVVMYAKCGDIVKARNVFDMIPH 258
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ WN++++G+ + L + L IF L ++PD V+ + G
Sbjct: 259 KDYVSWNSMLTGYLHHGLLHEALDIF-RLMVQNGIEPDKVAISSVLAR---VLSFKHGRQ 314
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG + G+ ++ V+NALI +Y K + + +F+ M ER+ VSWN+II S+N
Sbjct: 315 LHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN 374
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ F+ + + PD IT V+VL
Sbjct: 375 GLKYFEQMHRANAK-----PDGITFVSVL 398
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 7/138 (5%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI +YS G + +FD + R+ WNA++S +KN ++ L F ++ KP
Sbjct: 334 LIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKN---SNGLKYFEQMHR-ANAKP 389
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
D TF V+ C V G + M+ + G+ + ++ +YG+ +EE +
Sbjct: 390 DGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSM 449
Query: 258 F--EVMPERNLVSWNSII 273
E+ E W +++
Sbjct: 450 IVQEMGLEAGPTVWGALL 467
>gi|347954460|gb|AEP33730.1| chlororespiratory reduction 21, partial [Capsella bursa-pastoris]
Length = 820
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 154/275 (56%), Gaps = 8/275 (2%)
Query: 39 SLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQE-NLHNADL- 96
+ R +++K L + A + +F +++LC+ + + +ALSL+ E + N +
Sbjct: 1 NFRIQYQQKLXFKLHDEQPQAPSSTSYF-HRVSSLCKNGE-IKEALSLVTEMDFRNLRIG 58
Query: 97 KEATGVLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV 155
E G +LQ C +E+D+ GK++H ++ ++ + I T+L+ Y+ C + +
Sbjct: 59 PEIYGEILQGCVYERDLCTGKQIHARILKNGDLYARNEYIETKLVIFYAKCDDLEIAEVL 118
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
F L+ RN+F W A++ + L L FVE+ + E+ PDNF P V KACG +
Sbjct: 119 FSKLRVRNVFSWAAIIGVKCRMGLCEGALMGFVEML-ENEIFPDNFVVPNVFKACGALQW 177
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
FG GVHG K GL VFV+++L MYGKC +++ K+F+ +PERN+V+WN+++ G
Sbjct: 178 SRFGRGVHGYVLKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVG 237
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +NG + E+ LL M ++G P +TV T L
Sbjct: 238 YVQNGMNEEAIRLLSDMR--KDGVEPTRVTVSTCL 270
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 4/202 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L A + +E G + H ++ D I+ T L+ Y G + +FD + ++
Sbjct: 270 LSASANMAGVEEGTQCHA-IAIVNGLELDNILGTSLLNFYCKVGLIEYAEMIFDRMFEKD 328
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN L+SG+ + L D + + +L +LK D T ++ A ++ G V
Sbjct: 329 VVTWNLLISGYVQQGLVEDAIYM-CQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQ 387
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ L D+ +++ + MY KC + + K+F+ E++L+ WN+++ ++E+G S
Sbjct: 388 CXCFRHSLESDIVLASTAMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGHSG 447
Query: 284 ESFDLLIKMMGCEEGFIPDVIT 305
E+ L +M E P+VIT
Sbjct: 448 EALRLFYEMQ--LESVPPNVIT 467
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 57 NNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIG 116
N S + +HFL+++ +ES A S+ V L A + G
Sbjct: 513 NGCSEEAIHFLRKM----QESGMRPNAFSIT--------------VALSASANLASXHFG 554
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
+ +H + + + S+ I T L+ MY+ CG + RVF+S + L +NA++S +
Sbjct: 555 RSIHGYIIRNLRHSSSASIETSLVDMYAKCGDINKAERVFESKLSNELPLYNAMISAYAL 614
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH-GMAAKMGLIGDV 235
T+ ++++ L D KPD+ TF ++ AC D+ V M + G+ +
Sbjct: 615 XGNVTEAVALYRSL-EDMGXKPDSITFTSLLSACNHAGDIDQAIRVFTDMVSNHGVKPCL 673
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPER 264
L+ ++ ++ ++L E MP +
Sbjct: 674 EHYGLLVDLFASAKETDKALRLMEEMPYK 702
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 4/151 (2%)
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
T NL W +++G +N + + F+ ++ ++P+ F+ + A +A FG
Sbjct: 497 TPNLISWTTMMNGMVQNGCSEEAIH-FLRKMQESGMRPNAFSITVALSASANLASXHFGR 555
Query: 221 GVHGMAAK-MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+HG + + + +L+ MY KC + + ++FE L +N++I ++
Sbjct: 556 SIHGYIIRNLRHSSSASIETSLVDMYAKCGDINKAERVFESKLSNELPLYNAMISAYALX 615
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ L + + G PD IT ++L
Sbjct: 616 GNVTEAVALYRSLE--DMGXKPDSITFTSLL 644
>gi|347954486|gb|AEP33743.1| chlororespiratory reduction 21, partial [Lobularia maritima]
Length = 734
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/244 (36%), Positives = 142/244 (58%), Gaps = 7/244 (2%)
Query: 66 FLQEITTLCEESKSLNKALSLLQE-NLHNADL-KEATGVLLQACGHEKDIEIGKRVHELV 123
+ +++L + + +N+AL L+ E + N + E G +LQ C +++D+ GK++H V
Sbjct: 19 YFHRVSSLSKNGE-INEALRLVTEMDFRNLRIGPEIFGEILQGCVYDRDLSTGKQIHARV 77
Query: 124 SASTQF-SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTD 182
+ +F S + I T+L+ Y+ C S +F L+ RN+F W A+V ++ D
Sbjct: 78 LKNGEFYSRNEYIETKLVVFYAKCDDLEISESLFSRLRIRNVFSWAAIVGVRSRIGFSED 137
Query: 183 VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALI 242
L+ FVE+ +TE+ PDNF P V KACG + FG VHG K L VFV+++L
Sbjct: 138 ALTGFVEML-ETEISPDNFVVPNVCKACGVLRWSRFGRSVHGFVMKSRLHDCVFVASSLA 196
Query: 243 AMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
MYGK F+++ K+F+ +PERN+V+WN+++ G+ +NG + E+ LL M EEG P
Sbjct: 197 DMYGKRGFLDDARKVFDEIPERNVVAWNAMMVGYVQNGMNEEAIRLLSDMK--EEGIEPT 254
Query: 303 VITV 306
+TV
Sbjct: 255 RVTV 258
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 4/202 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L A + IE GK+ H V+ D I+ T L+ Y G + VFD + ++
Sbjct: 262 LSASANIGGIEEGKQSHA-VAIVNGLEMDNILGTSLLNFYCKVGLIEYAEMVFDRMIGKD 320
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN L+SG+ + L + + + L LK D T ++ D+ G V
Sbjct: 321 VVTWNLLISGYVQQGLVENAIDM-CRLMRVENLKFDCVTLSTLMSVAARTRDLKLGKEVL 379
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ D+ +++ + MY +C V + K+F+ +++L+ WN+++ ++E+G S
Sbjct: 380 CYCIRHSFESDIGLASTAVDMYAECGSVVDAKKVFDATVQKDLILWNALLAAYTESGHSG 439
Query: 284 ESFDLLIKMMGCEEGFIPDVIT 305
E+ L +M + P+VIT
Sbjct: 440 EALRLFYEMQ--LQSVPPNVIT 459
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 82/170 (48%), Gaps = 6/170 (3%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
+ + L AC + + +G +H + + Q S+ +++T L+ MY+ CG + RVF S
Sbjct: 529 SIAIALSACANLASLHLGTSIHGYIIRNQQHSSSVLVDTSLVDMYAKCGDINKAERVFGS 588
Query: 159 LKTRNLFQ---WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
K + F+ + A++S + + ++++ L + ++PD+ T ++ AC D
Sbjct: 589 -KLYSEFELPLYGAMISAYALYGKLKEAVTLYRNL-EEIGIEPDDKTITSLLSACKNAGD 646
Query: 216 VGFGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
+ GM +K G+ + + ++ + VE+ ++L E MP +
Sbjct: 647 TKQAIEIFAGMVSKHGMKPCLEHYSLMVELLASAGEVEKALRLVEEMPYK 696
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 85/183 (46%), Gaps = 12/183 (6%)
Query: 137 TRLITMYSLCGFPL--DSRRVFDSLKTR----NLFQWNALVSGFTKNELYTDVLSIFVEL 190
TR + M SL G +++ +F +++ NL W +++G +N + + +F+
Sbjct: 459 TRNLIMRSLLGNGQVSEAKEMFSQMQSSGIFPNLISWTTMMNGLVQNGCSEEAI-LFLRK 517
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK-MGLIGDVFVSNALIAMYGKCA 249
++ +P+ + + AC +A + G+ +HG + V V +L+ MY KC
Sbjct: 518 MLESGARPNTVSIAIALSACANLASLHLGTSIHGYIIRNQQHSSSVLVDTSLVDMYAKCG 577
Query: 250 FVEEMVKLF--EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
+ + ++F ++ E L + ++I ++ G E+ L + E G PD T+
Sbjct: 578 DINKAERVFGSKLYSEFELPLYGAMISAYALYGKLKEAVTLYRNLE--EIGIEPDDKTIT 635
Query: 308 TVL 310
++L
Sbjct: 636 SLL 638
>gi|347954474|gb|AEP33737.1| chlororespiratory reduction 21 [Nasturtium officinale]
Length = 826
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/250 (36%), Positives = 144/250 (57%), Gaps = 11/250 (4%)
Query: 66 FLQEITTLCEESKSLNKALSLLQENLHNADLK---EATGVLLQACGHEKDIEIGKRVHEL 122
+ +++L +S + +ALSLL E + L+ E G +LQ C +E+D+ GK++H
Sbjct: 36 YFHRVSSL-SKSGEIREALSLLTE-MDFRKLRIGPEIYGEILQGCVYERDLCTGKQIHAR 93
Query: 123 VSASTQF--SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELY 180
+ + F N++I T+L+ Y+ C S +F L+ RN++ W A++ + L
Sbjct: 94 ILKNGDFYAKNEYI-ETKLVIFYAKCDAFEASEVLFSKLRVRNVYSWAAIIGVKCRIGLC 152
Query: 181 TDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNA 240
+ L FVE+ + E+ PDNF P V KACG + FG GVHG K GL VFV+++
Sbjct: 153 EEALMGFVEMLQN-EIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKSGLHDCVFVASS 211
Query: 241 LIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI 300
L MYGKC +++ K+F+ +PERN+V+WN+++ G+ +NG + E+ LL M +EG
Sbjct: 212 LADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMR--KEGIE 269
Query: 301 PDVITVVTVL 310
P +TV T L
Sbjct: 270 PTRVTVSTCL 279
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 4/202 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L A + IE GK+ H ++ D I+ T + Y G + +FD + ++
Sbjct: 279 LSASANMDGIEEGKQSHA-IAIVNGLELDNILGTSNLNFYCKVGLIEYAEMIFDRMIEKD 337
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN L+SG+ + L D + + +L LK D T ++ A ++ G V
Sbjct: 338 VVTWNLLISGYVQQGLVEDAIHM-CQLMRLENLKYDCVTLSTLMSAAARTQNLKLGKEVQ 396
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ D+ +++ + MY C + + K+F+ + ++L+ WN+++ ++E+G S
Sbjct: 397 CYCIRHSFASDIVLASTAVDMYANCGSIIDAKKVFDSVLAKDLILWNTLLSVYAESGLSG 456
Query: 284 ESFDLLIKMMGCEEGFIPDVIT 305
E+F L +M E P+ IT
Sbjct: 457 EAFRLFYEMQ--LESVPPNAIT 476
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V L AC + + G+ VH + + Q S+ +I T L+ MY+ CG + VF S
Sbjct: 549 VALSACSNLASLHFGRSVHGYIIRNQQHSSSVLIETSLVDMYAKCGDINKAEMVFRSKLC 608
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+L +NA++S + N + +++ L DT +KPDN TF ++ AC DV
Sbjct: 609 SDLPLYNAMISAYALNGNVKEAIALCRRL-EDTGIKPDNITFTSLLSACNHAGDVSQAVE 667
Query: 222 VH-GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
+ M +K G+ + ++ + ++ ++L E MP ++
Sbjct: 668 IFTDMVSKHGIKPCLEHYGLMVDILASAGETDKALRLIEEMPYKS 712
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 95/212 (44%), Gaps = 43/212 (20%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ A +++++GK V + F++D ++ + + MY+ CG +D+++VFDS+ +
Sbjct: 379 LMSAAARTQNLKLGKEV-QCYCIRHSFASDIVLASTAVDMYANCGSIIDAKKVFDSVLAK 437
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN L+S + ++ L + +F E+ ++ + P+ T+
Sbjct: 438 DLILWNTLLSVYAESGLSGEAFRLFYEMQLES-VPPNAITW------------------- 477
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER----NLVSWNSIICGFSE 278
N +I + + V E ++F M NLVSW +++ G +
Sbjct: 478 ----------------NLIILSFLRNGQVNEAKEIFSQMQSSGIFPNLVSWTTMMNGLVQ 521
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
NG S E+ L KM E G P+ ++ L
Sbjct: 522 NGCSEEAILFLRKMQ--ESGLRPNAFSITVAL 551
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 80/165 (48%), Gaps = 8/165 (4%)
Query: 151 DSRRVFDSLKTR----NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCV 206
+++ +F +++ NL W +++G +N + + +F+ ++ L+P+ F+
Sbjct: 492 EAKEIFSQMQSSGIFPNLVSWTTMMNGLVQNGCSEEAI-LFLRKMQESGLRPNAFSITVA 550
Query: 207 IKACGGIADVGFGSGVHGMAAK-MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
+ AC +A + FG VHG + V + +L+ MY KC + + +F +
Sbjct: 551 LSACSNLASLHFGRSVHGYIIRNQQHSSSVLIETSLVDMYAKCGDINKAEMVFRSKLCSD 610
Query: 266 LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
L +N++I ++ NG E+ L ++ + G PD IT ++L
Sbjct: 611 LPLYNAMISAYALNGNVKEAIALCRRLE--DTGIKPDNITFTSLL 653
>gi|347954462|gb|AEP33731.1| chlororespiratory reduction 21, partial [Crucihimalaya wallichii]
Length = 830
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 145/249 (58%), Gaps = 9/249 (3%)
Query: 66 FLQEITTLCEESKSLNKALSLLQE-NLHNADL-KEATGVLLQACGHEKDIEIGKRVHELV 123
+ +++LC+ + + +ALSL+ + + N + E G +LQ C +E+D+ GK++H +
Sbjct: 38 YFHRVSSLCKNGE-IKEALSLVTKMDFRNLRIGPEIYGEILQGCVYERDLCTGKQIHARI 96
Query: 124 SASTQF--SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYT 181
+ F N++I T+L+ Y+ C ++ +F L+ RN+F W A++ + L
Sbjct: 97 LKNGDFYAGNEYI-ETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLCE 155
Query: 182 DVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNAL 241
L FVE+ + E+ PDNF P V KACG + FG GVHG K GL VFV+++L
Sbjct: 156 GALMGFVEML-ENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGLEDCVFVASSL 214
Query: 242 IAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIP 301
MYGKC +++ K+F+ +PERN+V+WN+++ G+ +NG + E+ LL M ++G P
Sbjct: 215 ADMYGKCGVLDDARKVFDEIPERNVVAWNALLVGYVQNGMNEEAIRLLSDMR--KDGVEP 272
Query: 302 DVITVVTVL 310
+TV T L
Sbjct: 273 SRVTVSTCL 281
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 97/202 (48%), Gaps = 4/202 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L A + + GK+ H ++ D I+ T L+ Y G + +FD + ++
Sbjct: 281 LSASANMGGVAEGKQSHA-IAILNGLELDNILGTSLLNFYCKVGLIEYAEMIFDRMFDKD 339
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN L+SG+ + L D + + +L LK D T ++ A ++ FG V
Sbjct: 340 VVTWNLLISGYVQQGLVEDAIYM-CQLMRLENLKYDCVTLSTLMSAAARTKNLKFGKEVQ 398
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ L D+ +++ + MY KC + + K+F+ E++L+ WN+++ ++E+G S
Sbjct: 399 CYCIRHSLESDIVLASITMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSG 458
Query: 284 ESFDLLIKMMGCEEGFIPDVIT 305
E+ L +M E P+VIT
Sbjct: 459 EALRLFYEMQ--LESVPPNVIT 478
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V L A + + G+ +H + + Q S+ I T L+ MY+ CG + RVF S
Sbjct: 551 VALSASANLASLHFGRSIHGYIVRNLQHSSSVSIETSLVDMYAKCGDINKAERVFGSKLY 610
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
L +NA++S + + ++++ L D KPDN TF ++ AC + D+
Sbjct: 611 SELPLYNAMISAYALYGNVKEAITLYRSL-EDMGNKPDNITFTSLLSACNHVGDINQAIE 669
Query: 222 VH-GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
+ M +K G+ + ++ + + +KL E MP +
Sbjct: 670 IFTDMVSKHGVKPCLEHYGLMVDLLASAGETDRALKLIEEMPYK 713
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL W +++G +N + + +F+ D+ L+P+ F+ + A +A + FG +
Sbjct: 510 NLISWTTMMNGMVQNGCSEEAI-LFLRKMQDSGLRPNAFSITVALSASANLASLHFGRSI 568
Query: 223 HGMAAK-MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
HG + + V + +L+ MY KC + + ++F L +N++I ++ G
Sbjct: 569 HGYIVRNLQHSSSVSIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGN 628
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L + + G PD IT ++L
Sbjct: 629 VKEAITLYRSLE--DMGNKPDNITFTSLL 655
>gi|347954454|gb|AEP33727.1| chlororespiratory reduction 21 [Arabis hirsuta]
Length = 824
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 152/271 (56%), Gaps = 12/271 (4%)
Query: 48 SSLSLSAKTNNASTQGLH-----FLQEITTLCEESKSLNKALSLLQE-NLHNADL-KEAT 100
+++S+ +N+ Q + + +++LC+ + + +ALSL+ E + N + E
Sbjct: 7 NTISIKLPSNHHDVQARNPSSTSYFHRVSSLCKNGE-IREALSLVTEMDFRNLRIGPEIF 65
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQF-SNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
G +LQ C + +D+ G+++H + + F + + I T+L+ Y+ C + +F L
Sbjct: 66 GEILQGCVYXRDLRTGQQIHARILKNGDFYARNEYIETKLVIFYAKCDALEVAEVLFSKL 125
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+ RN+F W A++ + L L FVE+ + + PDNF P V KACG + FG
Sbjct: 126 RVRNVFSWAAIIGVKCRIGLVEGALMGFVEMLENG-IFPDNFVVPNVCKACGALQWSRFG 184
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
GVHG AK GL VFV+++L MYGKC +++ K+F+ +PERN+V+WN+++ G+ +N
Sbjct: 185 RGVHGYVAKAGLHDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQN 244
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + E+ LL M +EG P +TV T L
Sbjct: 245 GMNEEAIRLLSDMR--KEGVEPTRVTVSTCL 273
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 96/202 (47%), Gaps = 4/202 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L A + + IE GK+ H ++ D I+ T ++ Y G + +FD + ++
Sbjct: 273 LSASANMRGIEEGKQSHA-IAIVNGLELDNILGTSILNFYCKVGLIDYAEMIFDRMIEKD 331
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN L+SG+ L + + + +L LK D T ++ A ++ G V
Sbjct: 332 VVTWNLLISGYVHQGLVENAIYM-CQLMRLENLKFDCVTLSTLMSAAARTQNLKLGKEVQ 390
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ D+ +++ + MY KC V + K+F+ +++L+ WN+++ ++E+G S
Sbjct: 391 CYCIRHSFESDIVLASTAVDMYAKCGSVVDAKKVFDSTVQKDLILWNTLLAAYAESGLSG 450
Query: 284 ESFDLLIKMMGCEEGFIPDVIT 305
E+ L +M E P+VIT
Sbjct: 451 EALRLFYEMQ--LESVPPNVIT 470
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 1/164 (0%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V L AC + + G+ +H + + Q S+ I T L+ MY+ CG + RVF S
Sbjct: 543 VALSACVNLASLHFGRSIHGYIIRNQQHSSSASIETSLVDMYAKCGDINKAERVFGSKLY 602
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
L +NA++S + + ++++ L D +KPDN T V+ AC D+
Sbjct: 603 SELPLYNAMISAYALYGNVKEAVALYRSLEEDVGIKPDNITITNVLSACNHAGDINQAIE 662
Query: 222 VH-GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
+ M +K G+ + ++ + E+ + L E MP +
Sbjct: 663 IFTDMVSKHGMKPCLEHYGLMVDLLASAGETEKALSLIEEMPYK 706
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W +++G +N + + +F+ ++ ++P+ F+ + AC +A + FG +
Sbjct: 502 NMISWTTMMNGLVQNGCSEEAI-LFLRKMQESGMRPNVFSITVALSACVNLASLHFGRSI 560
Query: 223 HGMAAK-MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
HG + + +L+ MY KC + + ++F L +N++I ++ G
Sbjct: 561 HGYIIRNQQHSSSASIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGN 620
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L + + + G PD IT+ VL
Sbjct: 621 VKEAVALY-RSLEEDVGIKPDNITITNVL 648
>gi|297796453|ref|XP_002866111.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311946|gb|EFH42370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 143/249 (57%), Gaps = 9/249 (3%)
Query: 66 FLQEITTLCEESKSLNKALSLLQE-NLHNADL-KEATGVLLQACGHEKDIEIGKRVHELV 123
+ +++LC+ + + +ALSL+ E + N + E G +LQ C +E+D+ GK++H +
Sbjct: 38 YFHRVSSLCKNGE-IKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQIHARI 96
Query: 124 SASTQF--SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYT 181
+ F N++I T+L+ Y+ C + +F L+ RN+F W A++ + L
Sbjct: 97 LKNGDFYAKNEYI-ETKLVIFYAKCDALDIAEVLFTKLRVRNVFSWAAIIGVKCRIGLCE 155
Query: 182 DVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNAL 241
L FVE+ + E+ PDNF P V KACG + FG GVHG K GL VFV+++L
Sbjct: 156 GALMGFVEML-ENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGLEDCVFVASSL 214
Query: 242 IAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIP 301
MYGKC +++ K+F+ +PERN+V+WN+++ G+ +NG + E+ L M +EG P
Sbjct: 215 ADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMR--KEGVEP 272
Query: 302 DVITVVTVL 310
+TV T L
Sbjct: 273 TRVTVSTCL 281
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 4/202 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L A + +E GK+ H ++ D I+ T L+ Y G + VFD + ++
Sbjct: 281 LSASANMGGVEEGKQSHA-IAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRMIDKD 339
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN ++SG+ + L + + + +L +LK D T ++ A ++ G V
Sbjct: 340 VVTWNLIISGYVQQGLVENAIYM-CQLMRLEKLKYDCVTLATLMSAAARTQNLKLGKEVQ 398
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ D+ +++ ++ MY KC + + K+F+ E++L+ WN+++ ++E+G S
Sbjct: 399 CYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTAEKDLILWNTLLAAYAESGLSG 458
Query: 284 ESFDLLIKMMGCEEGFIPDVIT 305
E L M EG P+VIT
Sbjct: 459 EGLRLFYGMQ--LEGVPPNVIT 478
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL W +++G +N + + +F+ ++ L+P+ + + AC +A + FG +
Sbjct: 510 NLISWTTMMNGMVQNGCSEEAI-LFLRKMQESGLRPNAVSITVALSACANLASLHFGRSI 568
Query: 223 HGMAAK-MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
HG + + V + +L+ MY KC + + K+F L +N++I ++ G
Sbjct: 569 HGYIIRNLQHSSSVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLYNAMISAYALYGN 628
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L + G G PD IT+ VL
Sbjct: 629 LKEAIALYRSLEGV--GLKPDNITITNVL 655
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V L AC + + G+ +H + + Q S+ I T L+ MY+ CG + +VF S
Sbjct: 551 VALSACANLASLHFGRSIHGYIIRNLQHSSSVSIETSLVDMYAKCGDINKAEKVFGSKLY 610
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
L +NA++S + + ++++ L LKPDN T V+ AC D +
Sbjct: 611 SELPLYNAMISAYALYGNLKEAIALYRSLEG-VGLKPDNITITNVLSACNHAGDNNQATE 669
Query: 222 -VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
V M +K G+ + ++ + ++ ++L E MP +
Sbjct: 670 IVTEMVSKHGMNPCLEHYGLMVDLLASAGQTDKALRLIEEMPYK 713
>gi|347954476|gb|AEP33738.1| chlororespiratory reduction 21, partial [Matthiola incana]
Length = 784
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 145/248 (58%), Gaps = 7/248 (2%)
Query: 66 FLQEITTLCEESKSLNKALSLLQE-NLHNADLK-EATGVLLQACGHEKDIEIGKRVH-EL 122
+ +++LC+ + + +ALSL+ E + N + E G +LQ C +E+D+ G+++H ++
Sbjct: 15 YFHRVSSLCKNGE-IREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQI 73
Query: 123 VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTD 182
+ ++ + I T+L+ Y+ C ++ +F L+ RN+F W A++ + L
Sbjct: 74 LKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEG 133
Query: 183 VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALI 242
L FVE+ + + PDNF P V KACG + FG GVHG AK GL VFV+++L
Sbjct: 134 ALMGFVEMLENG-IFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLA 192
Query: 243 AMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
MYGKC +++ K+F+ +P+RN V+WN+++ G+ +NG + E+ LL +M +EG P
Sbjct: 193 DMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMR--KEGIEPT 250
Query: 303 VITVVTVL 310
+TV T L
Sbjct: 251 RVTVSTCL 258
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 4/202 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L A + IE GK+ H + D I+ T ++ Y G + +FD + +
Sbjct: 258 LSASANMGGIEEGKQSHAXXIVNG-LXLDNILGTSILNFYCXVGLIEYAEMIFDGMIEKX 316
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WN L+SG+ + L + + + +L LK D T ++ A ++ G +
Sbjct: 317 XVTWNLLISGYVQQGLVEEAIHM-CQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQ 375
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ GL D+ +++ + MY KC + K+F+ +++L+ WN+++ ++++G S
Sbjct: 376 CYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSG 435
Query: 284 ESFDLLIKMMGCEEGFIPDVIT 305
E+ L +M E P+VIT
Sbjct: 436 EALRLFYEMQ--LESVPPNVIT 455
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 2/164 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V L AC + + G+ +H + + Q+S I T L+ MY+ CG + RVF S
Sbjct: 528 VALSACANLASLHFGRSIHGYIIRNQQYSFSAWIETSLVDMYAKCGDINKAERVFGSKLC 587
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
L +NA++S + + ++++ L D +KPDN T ++ AC DV
Sbjct: 588 SELPLYNAMISAYALYGKVREAITLYRSL-EDGGVKPDNITITSLLSACNYGRDVNQAIE 646
Query: 222 VHG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
V M +K G+ + ++ + ++ ++L E MP +
Sbjct: 647 VFSDMVSKHGMKPCLEHYGLMVDLLASAGETDKALRLMEEMPYK 690
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 73/150 (48%), Gaps = 6/150 (4%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL W +++G +N + + +F+ ++ L+P+ FT + AC +A + FG +
Sbjct: 487 NLISWTTMMNGLVQNGCSEEAI-LFLRKMQESGLRPNAFTITVALSACANLASLHFGRSI 545
Query: 223 HGMAAKMGLIG-DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
HG + ++ +L+ MY KC + + ++F L +N++I ++ G
Sbjct: 546 HGYIIRNQQYSFSAWIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGK 605
Query: 282 SCESFDLLIKMMGCEEGFI-PDVITVVTVL 310
E+ L + E+G + PD IT+ ++L
Sbjct: 606 VREAITLYRSL---EDGGVKPDNITITSLL 632
>gi|347954478|gb|AEP33739.1| chlororespiratory reduction 21, partial [Matthiola sinuata]
Length = 794
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 145/248 (58%), Gaps = 7/248 (2%)
Query: 66 FLQEITTLCEESKSLNKALSLLQE-NLHNADLK-EATGVLLQACGHEKDIEIGKRVH-EL 122
+ +++LC+ + + +ALSL+ E + N + E G +LQ C +E+D+ G+++H ++
Sbjct: 2 YFHRVSSLCKNGE-IREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQI 60
Query: 123 VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTD 182
+ ++ + I T+L+ Y+ C ++ +F L+ RN+F W A++ + L
Sbjct: 61 LKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEG 120
Query: 183 VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALI 242
L FVE+ + + PDNF P V KACG + FG GVHG AK GL VFV+++L
Sbjct: 121 ALMGFVEMLENG-IFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLA 179
Query: 243 AMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
MYGKC +++ K+F+ +P+RN V+WN+++ G+ +NG + E+ LL +M +EG P
Sbjct: 180 DMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMR--KEGIEPT 237
Query: 303 VITVVTVL 310
+TV T L
Sbjct: 238 RVTVSTCL 245
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 97/202 (48%), Gaps = 4/202 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L A + IE GK+ H ++ D I+ T ++ Y G + +FD + ++
Sbjct: 245 LSASANMGGIEEGKQSHA-IAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKD 303
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN L+SG+ + L + + + +L LK D T ++ A ++ G +
Sbjct: 304 VVTWNLLISGYVQQGLVEEAIYM-CQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQ 362
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ GL D+ +++ + MY KC + K+F+ +++L+ WN+++ ++++G S
Sbjct: 363 CYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSG 422
Query: 284 ESFDLLIKMMGCEEGFIPDVIT 305
E+ L +M E P+VIT
Sbjct: 423 EALRLFYEMQ--LESVPPNVIT 442
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 72/150 (48%), Gaps = 6/150 (4%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL W +++G +N + + +F+ ++ L+P+ FT + AC +A + FG +
Sbjct: 474 NLISWTTMMNGLVQNGCSEEAI-LFLRKMQESRLRPNAFTITVALSACANLASLHFGRSI 532
Query: 223 HGMAAKMGLIG-DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
HG + + +L+ MY KC + + ++F L +N++I ++ G
Sbjct: 533 HGYIIRNQQYSFSASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGK 592
Query: 282 SCESFDLLIKMMGCEEGFI-PDVITVVTVL 310
E+ L + E+G + PD IT+ ++L
Sbjct: 593 VREAITLYRSL---EDGGVKPDNITITSLL 619
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 3/164 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V L AC + + G+ +H + + Q+S I T L+ MY+ CG + RVF S
Sbjct: 515 VALSACANLASLHFGRSIHGYIIRNQQYSFSASIETSLVDMYAKCGDINKAERVFGSKLC 574
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
L +NA++S + + ++++ L D +KPDN T ++ +C DV
Sbjct: 575 SELPLYNAMISAYALYGKVREAITLYRSL-EDGGVKPDNITITSLL-SCNYGRDVNQAIE 632
Query: 222 VHG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
V M +K G+ + ++ + ++ ++L E MP +
Sbjct: 633 VFSDMVSKHGMKPCLEHYGLMVDLLASAGETDKALRLMEEMPYK 676
>gi|347954484|gb|AEP33742.1| chlororespiratory reduction 21 [Barbarea verna]
Length = 607
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 140/248 (56%), Gaps = 7/248 (2%)
Query: 66 FLQEITTLCEESKSLNKALSLLQE-NLHNADL-KEATGVLLQACGHEKDIEIGKRVHELV 123
+ +++LC+ + + +ALSL+ E + N + E G +LQ C +E+D+ GK++H +
Sbjct: 32 YFHRVSSLCKNGE-IREALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQIHARI 90
Query: 124 SASTQF-SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTD 182
+ F + + I T+L+ YS C + +F L+ RN++ W A++ + L
Sbjct: 91 LKNGDFYARNEYIETKLVIFYSKCDSFEVAEVLFSKLRVRNVYSWAAIIGLKCRIGLCEG 150
Query: 183 VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALI 242
L FVE+ D + PDNF P V KACG + FG GVHG K G VFV+++L
Sbjct: 151 ALMGFVEMFEDG-IFPDNFVVPNVXKACGALQWSRFGRGVHGYVVKSGXDDCVFVASSLA 209
Query: 243 AMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
MYGKC +++ K+F+ +PERN+V+WN+++ G+ +NG + E+ L M EEG P
Sbjct: 210 DMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFFDMR--EEGIEPT 267
Query: 303 VITVVTVL 310
+TV T L
Sbjct: 268 RVTVSTCL 275
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 4/202 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L A + IE GK+ H ++ D I+ T ++ Y G + +FD + ++
Sbjct: 275 LSASANMGGIEEGKQSHA-IAIVHGLELDNILGTSILNFYCKVGLIEYAEMIFDRMIEKD 333
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN L+SG+ + L D + + +L LK D T ++ A ++ G V
Sbjct: 334 VVTWNLLISGYVQQGLVEDAIHM-CQLMRLENLKYDCVTLATLMSAAARTQNLKLGKEVQ 392
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ L D+ +++ I MY KC + + K F+ + E++L+ WN+++ ++E G S
Sbjct: 393 CYCIRHSLESDIVLASTAIDMYAKCGSIVDARKAFDSIVEKDLILWNTLLAAYAEPGLSG 452
Query: 284 ESFDLLIKMMGCEEGFIPDVIT 305
E+ L +M E P+VIT
Sbjct: 453 EALRLFYEMQ--LESVPPNVIT 472
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL W +++G +N + + +F+ ++ L+P+ + + AC +A + G +
Sbjct: 504 NLVSWTTMMNGLVQNGCSEEAI-LFLRKMQESGLRPNAISITVALSACAHLASLHLGRSI 562
Query: 223 HGMAAK-MGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
HG + V + +L+ MY KC + + +F
Sbjct: 563 HGYIIRNQHHSSSVSIETSLVDMYAKCGDLNKAEMIF 599
>gi|297799466|ref|XP_002867617.1| hypothetical protein ARALYDRAFT_354257 [Arabidopsis lyrata subsp.
lyrata]
gi|297313453|gb|EFH43876.1| hypothetical protein ARALYDRAFT_354257 [Arabidopsis lyrata subsp.
lyrata]
Length = 758
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 124/210 (59%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C + + I+ G RVH L+ N+ I+++L+ +Y+ CG+ + VFD + R
Sbjct: 329 LLETCYNLRAIDHGVRVHHLIPPYL-LRNNVGISSKLVRLYASCGYAEVAHEVFDRMSKR 387
Query: 163 --NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ F WN+L+SG+ + Y D ++++ +++ D +KPD FTFP V+KACGGI V G
Sbjct: 388 ESSPFAWNSLISGYAELGQYEDAMALYFQMAEDG-VKPDRFTFPRVLKACGGIGSVQIGE 446
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H K G DV V NAL+ MY KC + + +F+++P ++ VSWNS++ G+ +G
Sbjct: 447 AIHRDLVKAGFGYDVHVLNALVDMYAKCGDIVKARNVFDMIPNKDYVSWNSMLTGYLHHG 506
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ D+ M+ + G PD + + +VL
Sbjct: 507 LLHEALDIFRLMV--QNGIDPDKVAISSVL 534
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 107/209 (51%), Gaps = 12/209 (5%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+ACG ++IG+ +H +LV A F D + L+ MY+ CG + +R VFD +
Sbjct: 432 VLKACGGIGSVQIGEAIHRDLVKAG--FGYDVHVLNALVDMYAKCGDIVKARNVFDMIPN 489
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ WN++++G+ + L + L IF L + PD V+ + G
Sbjct: 490 KDYVSWNSMLTGYLHHGLLHEALDIF-RLMVQNGIDPDKVAISSVL---ARVLSFKHGRQ 545
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG + G+ ++ V+NALI +Y K + + +F+ M ER+ VSWN+II S +
Sbjct: 546 LHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSRDSN 605
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ F+ +M + PD IT V+VL
Sbjct: 606 GFKYFE---QMQHADAK--PDGITFVSVL 629
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI +YS G + +FD + R+ WNA++S +++ ++ F ++ + KP
Sbjct: 565 LIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSRD---SNGFKYFEQMQH-ADAKP 620
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNA-LIAMYGKCAFVEE 253
D TF V+ C V G + + +K I A ++ +YG+ +EE
Sbjct: 621 DGITFVSVLSLCANTGMVEDGERLFSLMSKEYGINPKMEHYACMVNLYGRAGMMEE 676
>gi|347954464|gb|AEP33732.1| chlororespiratory reduction 21, partial [Draba nemorosa]
Length = 829
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 146/252 (57%), Gaps = 11/252 (4%)
Query: 64 LHFLQEITTLCEESKSLNKALSLLQENLHNADLK---EATGVLLQACGHEKDIEIGKRVH 120
+ + +++LC++ + + +AL L+ E + + +++ E G +LQ C +E+D+ G+++H
Sbjct: 31 ISYFHRVSSLCKKGE-IREALGLVTE-MGSRNVRIGPEIYGEILQGCVYERDLSTGQQIH 88
Query: 121 ELVSASTQF--SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNE 178
+ + F N++I T+L+ Y+ C ++ +F L+ RN+F W A++ +
Sbjct: 89 ARILKNGDFYAKNEYI-ETKLVIFYAKCDALEVAQLLFSKLRARNVFSWAAIIGVRCRIG 147
Query: 179 LYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVS 238
L L FVE+ + L PDNF P V KACG + FG GVHG AK GL VFV+
Sbjct: 148 LVEGALMGFVEMLENG-LFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVA 206
Query: 239 NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEG 298
++L MYGKC +++ K+F+ +P+R +V+WN+++ G+ +NG + E+ LL M EG
Sbjct: 207 SSLADMYGKCGLLDDARKVFDEIPDRTVVAWNALMVGYVQNGMNQEAIRLLSAMR--NEG 264
Query: 299 FIPDVITVVTVL 310
P +TV T L
Sbjct: 265 IEPTRVTVSTCL 276
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L A + IE GK+ H ++ D I+ T ++ Y G + +FD + ++
Sbjct: 276 LSASANMGGIEEGKQSHA-IAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDRMIEKD 334
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN L+SG+ + L D + + +L L D T ++ A ++ G V
Sbjct: 335 VVTWNLLISGYVQQGLVEDAIHM-CQLMRRGNLNFDCVTLSSLMSAAARTHNLKLGKEVQ 393
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ G + D+ +++ + MY KC + + K+F E++L+ WN+++ ++E G S
Sbjct: 394 CYCIRHGFVSDIVLASTAVEMYAKCGSIVDAKKVFNSTVEKDLILWNTLLAAYAEPGLSG 453
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M EG P+VIT +V+
Sbjct: 454 EALRLFYEMQ--LEGVPPNVITWNSVI 478
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 5/166 (3%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V L AC + + G+ +H + + S+ I T L+ MY+ CG + RVF S
Sbjct: 546 VALSACANLASLHFGRSIHGYIIRNQHHSSSVSIETSLVDMYAKCGDISKAERVFGSKLY 605
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
L +NA++S + + +++ L D ++PDN T V+ AC D+
Sbjct: 606 SELPLYNAMISAYALYGNVKEATALYRSLDEDVGIEPDNITITNVLSACHHAGDI--NQA 663
Query: 222 VH---GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
+H M +K + + ++ + E+ ++L E MP +
Sbjct: 664 IHIFTDMVSKHAMKPCLEHYGLMVDLLASAGETEKALRLIEEMPYK 709
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL W +++G +N + + +++ ++ L+ + F+ + AC +A + FG +
Sbjct: 505 NLISWTTMMNGLVQNGCSEEAI-VYLRKMQESGLRLNVFSITVALSACANLASLHFGRSI 563
Query: 223 HGMAAK-MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
HG + V + +L+ MY KC + + ++F L +N++I ++ G
Sbjct: 564 HGYIIRNQHHSSSVSIETSLVDMYAKCGDISKAERVFGSKLYSELPLYNAMISAYALYGN 623
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L + + + G PD IT+ VL
Sbjct: 624 VKEA-TALYRSLDEDVGIEPDNITITNVL 651
>gi|347954480|gb|AEP33740.1| chlororespiratory reduction 21, partial [Matthiola maderensis]
Length = 807
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 144/248 (58%), Gaps = 7/248 (2%)
Query: 66 FLQEITTLCEESKSLNKALSLLQE-NLHNADL-KEATGVLLQACGHEKDIEIGKRVH-EL 122
+ +++LC+ + + +ALSL+ E + N + E G +LQ C +E+D+ G+++H ++
Sbjct: 14 YFHRVSSLCKNGE-IREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQI 72
Query: 123 VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTD 182
+ ++ + I T+L+ Y+ C ++ +F L+ RN+F W A++ + L
Sbjct: 73 LKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEG 132
Query: 183 VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALI 242
L FVE+ + + PDNF P V KACG + FG GVHG AK GL VFV+++L
Sbjct: 133 ALMGFVEMLENG-IFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLA 191
Query: 243 AMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
MYGKC +++ K+F+ +P+RN V+WN+++ G+ +NG E+ LL +M +EG P
Sbjct: 192 DMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMYEEAIRLLSEMR--KEGIEPT 249
Query: 303 VITVVTVL 310
+TV T L
Sbjct: 250 RVTVSTCL 257
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 97/202 (48%), Gaps = 4/202 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L A + IE GK+ H ++ D I+ T ++ Y G + +FD + ++
Sbjct: 257 LSASANMGGIEEGKQSHA-IAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKD 315
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN L+SG+ + L + + + +L LK D T ++ A ++ G +
Sbjct: 316 VVTWNLLISGYVQQGLVEEAIYM-CQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQ 374
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ GL D+ +++ + MY KC + K+F+ +++L+ WN+++ ++++G S
Sbjct: 375 CYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSG 434
Query: 284 ESFDLLIKMMGCEEGFIPDVIT 305
E+ L +M E P+VIT
Sbjct: 435 EALRLFYEMQ--LESVPPNVIT 454
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 2/164 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V L AC + + G+ +H + + Q+S I T L+ MY+ CG + RVF S
Sbjct: 527 VALSACVNLASLHFGRSIHGYIIRNQQYSFSASIETSLVDMYAKCGDINKAERVFGSKLC 586
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
L +NA++S + + ++++ L D +KPDN T ++ AC DV
Sbjct: 587 SELPLYNAMISAYALYGKVREAITLYRSL-EDGGVKPDNITITSLLSACNYGRDVNQAIE 645
Query: 222 V-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
V M +K G+ + ++ + ++ ++L E MP +
Sbjct: 646 VFRDMVSKHGMKPCLEHYGLMVDLLASAGETDKALRLMEEMPYK 689
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 72/150 (48%), Gaps = 6/150 (4%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL W +++G +N + + +F+ ++ L+P+ FT + AC +A + FG +
Sbjct: 486 NLISWTTMMNGLVQNGCSEEAI-LFLRKMQESGLRPNAFTITVALSACVNLASLHFGRSI 544
Query: 223 HGMAAKMGLIG-DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
HG + + +L+ MY KC + + ++F L +N++I ++ G
Sbjct: 545 HGYIIRNQQYSFSASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGK 604
Query: 282 SCESFDLLIKMMGCEEGFI-PDVITVVTVL 310
E+ L + E+G + PD IT+ ++L
Sbjct: 605 VREAITLYRSL---EDGGVKPDNITITSLL 631
>gi|347954468|gb|AEP33734.1| chlororespiratory reduction 21, partial [Lepidium virginicum]
Length = 788
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 142/245 (57%), Gaps = 7/245 (2%)
Query: 69 EITTLCEESKSLNKALSLLQE-NLHNADL-KEATGVLLQACGHEKDIEIGKRVHELVSAS 126
++++LC+ + + +AL L++E N + E G +LQ C +E+D+ G+++H + +
Sbjct: 1 QVSSLCKHGE-IREALRLVKEMEFRNVRIGPEIYGEILQGCVYERDLCTGQQIHARILKN 59
Query: 127 TQF-SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
F + + I T+L+ Y+ C ++ +F L+ RN+F W A++ + L L+
Sbjct: 60 GDFYARNQYIETKLLIFYAKCDAIEVAQNLFSRLRVRNVFSWAAIIGLKCRIGLCEGALT 119
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
FVE+ + L PDN+ P V KACG + FG GVHG K GL VFV+++L MY
Sbjct: 120 GFVEMIENGVL-PDNYVVPNVCKACGALQWTWFGRGVHGYLVKAGLHDCVFVASSLADMY 178
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
GKC + + K+F+ +PERN+V+WN+++ G+ +NG + E+ LL M +EG P +T
Sbjct: 179 GKCGVLNDARKVFDKIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMR--KEGIEPTRVT 236
Query: 306 VVTVL 310
V T L
Sbjct: 237 VSTCL 241
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 97/202 (48%), Gaps = 4/202 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L A + + IE GK+ H ++ D I+ T ++ Y G + +FD + ++
Sbjct: 241 LSASANIRGIEEGKQSHA-IAIVNGLEMDNILGTSILNFYCKVGLVEYAEMIFDRMIEKD 299
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN L+SG+ + L D + + +L L+ D+ T ++ A ++ G V
Sbjct: 300 VVTWNLLISGYVQQGLVDDAIHM-CKLMRLENLRYDSVTLSTLMSAAARTHNLKLGKEVQ 358
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ ++ +++ + MY KC + + K+F+ E++L+ WN+++ ++++G S
Sbjct: 359 CYCIRHCFESEIVLASTAVDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYADSGLSG 418
Query: 284 ESFDLLIKMMGCEEGFIPDVIT 305
E+ L M E P++IT
Sbjct: 419 EALRLFYDMQ--LESVPPNMIT 438
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 17/176 (9%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V L AC H + G+ +H + + Q S+ T L+ MY+ CG + + F S
Sbjct: 511 VALSACAHLASLNFGRSIHGYIIRNLQHSSSVSFVTSLVDMYAKCGDINQAEKAFGSKLY 570
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
L +NA++S + + ++++ L D +KPD+ TF ++ AC D+
Sbjct: 571 DELPLYNAMISAYALYGNMKEAIALYRRL-EDMAIKPDSITFTSLLSACSHAGDIVQAIN 629
Query: 222 V-------HGMA---AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLV 267
+ HGM GL+ D+ S+ G+ E++K P+ ++
Sbjct: 630 IFTEMVSKHGMKPCLEHYGLMVDLLASS------GETNKALELIKEMPYKPDARMI 679
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL W +++G +N + ++ F+ ++ L+P++F+ + AC +A + FG +
Sbjct: 470 NLISWTTMMNGLVQNGCSEEAIN-FLRKMQESGLRPNSFSITVALSACAHLASLNFGRSI 528
Query: 223 HGMAAK-MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
HG + + V +L+ MY KC + + K F L +N++I ++ G
Sbjct: 529 HGYIIRNLQHSSSVSFVTSLVDMYAKCGDINQAEKAFGSKLYDELPLYNAMISAYALYGN 588
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L ++ + PD IT ++L
Sbjct: 589 MKEAIALYRRLE--DMAIKPDSITFTSLL 615
>gi|255553863|ref|XP_002517972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542954|gb|EEF44490.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 483
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 134/233 (57%), Gaps = 10/233 (4%)
Query: 81 NKALS---LLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
+KAL L+Q L A G +L ACG+ + ++ GK VH + S FS + ++ +
Sbjct: 236 DKALGFFYLMQRKLGLAPDGFTFGTVLTACGNLRRLKQGKEVHAKLITSG-FSGNVVVES 294
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L+ MY CG +S+RVFD + +N W+AL+ GF +N + V+ IF E+ +L
Sbjct: 295 SLVDMYGKCGLVDESQRVFDRMSVKNSVSWSALLGGFCQNGDFESVIRIFREMGEADDL- 353
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
++F V++AC G+A V G VH + G DV + +AL+ +Y KC ++ ++
Sbjct: 354 ---YSFGTVLRACAGLAAVRQGKEVHCQYVRRGGWRDVIIESALVDLYAKCGCIDFAHRI 410
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F M RNL++WNS+ICGF++NG++ E+ + +M+ +EG PD IT + VL
Sbjct: 411 FTKMTVRNLITWNSMICGFAQNGWAEEALRIFDEMV--KEGTKPDYITFIGVL 461
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 120/231 (51%), Gaps = 8/231 (3%)
Query: 82 KALSLLQENLH-NADLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
KAL L E L D T +++AC + +GK H ++ F ++ +I + L
Sbjct: 136 KALDLFWEMLDVGVDPNAFTLSAVIKACTDLGTLMLGKCFHCVIMIRG-FHSNHVIGSAL 194
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
I +Y D+RR+FD L + W +++S +T+N++Y L F + L PD
Sbjct: 195 IDLYGRNYELDDARRLFDELLEPDAICWTSVISAYTRNDMYDKALGFFYLMQRKLGLAPD 254
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
FTF V+ ACG + + G VH G G+V V ++L+ MYGKC V+E ++F+
Sbjct: 255 GFTFGTVLTACGNLRRLKQGKEVHAKLITSGFSGNVVVESSLVDMYGKCGLVDESQRVFD 314
Query: 260 VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
M +N VSW++++ GF +NG F+ +I++ E G D+ + TVL
Sbjct: 315 RMSVKNSVSWSALLGGFCQNG----DFESVIRIFR-EMGEADDLYSFGTVL 360
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 2/208 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ C G ++H V S ++ F+ N+ L + L ++RRVFD L R
Sbjct: 57 LLQTCTKVVSFNHGLQIHAHVVKSGLETDRFVGNSLLALYFKLSTDFFETRRVFDGLYFR 116
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W ++++G+ K E L +F E+ D + P+ FT VIKAC + + G
Sbjct: 117 DVISWTSMITGYVKGEKPKKALDLFWEM-LDVGVDPNAFTLSAVIKACTDLGTLMLGKCF 175
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G + + +ALI +YG+ +++ +LF+ + E + + W S+I ++ N
Sbjct: 176 HCVIMIRGFHSNHVIGSALIDLYGRNYELDDARRLFDELLEPDAICWTSVISAYTRNDMY 235
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +M + G PD T TVL
Sbjct: 236 DKALGFFY-LMQRKLGLAPDGFTFGTVL 262
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 6/160 (3%)
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
+R SL + NL + GF K+ L I + S E+ F + +++ C
Sbjct: 5 KRHCSSLPSFNLKNKEIKIIGFCKSGALLHALDILNSIDS-REISNKPFIYASLLQTCTK 63
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA--FVEEMVKLFEVMPERNLVSWN 270
+ G +H K GL D FV N+L+A+Y K + F E ++F+ + R+++SW
Sbjct: 64 VVSFNHGLQIHAHVVKSGLETDRFVGNSLLALYFKLSTDFFETR-RVFDGLYFRDVISWT 122
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S+I G+ + ++ DL +M+ + G P+ T+ V+
Sbjct: 123 SMITGYVKGEKPKKALDLFWEML--DVGVDPNAFTLSAVI 160
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 124/209 (59%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++ACG + D++ G++VHE + A F +D I+ T L +MY+ CG ++R+VFD + R
Sbjct: 126 VIKACGSQSDLQAGRKVHEDIIARG-FESDVIVGTALASMYTKCGSLENARQVFDRMPKR 184
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA+++G+++N + L++F E+ + +KP++ T V+ C + + G +
Sbjct: 185 DVVSWNAIIAGYSQNGQPYEALALFSEMQVNG-IKPNSSTLVSVMPVCAHLLALEQGKQI 243
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A + G+ DV V N L+ MY KC V KLFE MP R++ SWN+II G+S N
Sbjct: 244 HCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQH 303
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ +M G P+ IT+V+VLP
Sbjct: 304 HEALAFFNRMQ--VRGIKPNSITMVSVLP 330
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 117/209 (55%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ C H +E GK++H + + +D ++ L+ MY+ CG + ++F+ + R
Sbjct: 227 VMPVCAHLLALEQGKQIH-CYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIR 285
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA++ G++ N + + L+ F + +KP++ T V+ AC + + G +
Sbjct: 286 DVASWNAIIGGYSLNSQHHEALAFFNRMQVRG-IKPNSITMVSVLPACAHLFALEQGQQI 344
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A + G + V NAL+ MY KC V KLFE MP++N+V+WN+II G+S++G
Sbjct: 345 HGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHP 404
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ L I+M +G PD +V+VLP
Sbjct: 405 HEALALFIEMQA--QGIKPDSFAIVSVLP 431
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 111/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC H +E G+++H S SND + N L+ MY+ CG + ++F+ + +
Sbjct: 328 VLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNA-LVNMYAKCGNVNSAYKLFERMPKK 386
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WNA++SG++++ + L++F+E+ + +KPD+F V+ AC + G +
Sbjct: 387 NVVAWNAIISGYSQHGHPHEALALFIEMQAQG-IKPDSFAIVSVLPACAHFLALEQGKQI 445
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + G +V V L+ +Y KC V KLFE MPE+++VSW ++I + +G
Sbjct: 446 HGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHG 505
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L KM E G D I +L
Sbjct: 506 EDALALFSKMQ--ETGTKLDHIAFTAIL 531
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N W + G+ KN + L ++ ++ T + PD F VIKACG +D+ G V
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQR-TGINPDKLVFLSVIKACGSQSDLQAGRKV 142
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G DV V AL +MY KC +E ++F+ MP+R++VSWN+II G+S+NG
Sbjct: 143 HEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQP 202
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ L +M G P+ T+V+V+P
Sbjct: 203 YEALALFSEMQ--VNGIKPNSSTLVSVMP 229
>gi|15240572|ref|NP_200385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171613|sp|Q9FM64.1|PP431_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g55740, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 21; Flags: Precursor
gi|9758608|dbj|BAB09241.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332009292|gb|AED96675.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 830
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 141/248 (56%), Gaps = 7/248 (2%)
Query: 66 FLQEITTLCEESKSLNKALSLLQE-NLHNADL-KEATGVLLQACGHEKDIEIGKRVHELV 123
+ +++LC+ + + +ALSL+ E + N + E G +LQ C +E+D+ GK++H +
Sbjct: 38 YFHRVSSLCKNGE-IKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARI 96
Query: 124 SASTQF-SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTD 182
+ F + + I T+L+ Y+ C + +F L+ RN+F W A++ + L
Sbjct: 97 LKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEG 156
Query: 183 VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALI 242
L FVE+ + E+ PDNF P V KACG + FG GVHG K GL VFV+++L
Sbjct: 157 ALMGFVEML-ENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLA 215
Query: 243 AMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
MYGKC +++ K+F+ +P+RN V+WN+++ G+ +NG + E+ L M ++G P
Sbjct: 216 DMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMR--KQGVEPT 273
Query: 303 VITVVTVL 310
+TV T L
Sbjct: 274 RVTVSTCL 281
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 98/202 (48%), Gaps = 4/202 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L A + +E GK+ H ++ D I+ T L+ Y G + VFD + ++
Sbjct: 281 LSASANMGGVEEGKQSHA-IAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKD 339
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN ++SG+ + L D + + +L +LK D T ++ A ++ G V
Sbjct: 340 VVTWNLIISGYVQQGLVEDAIYM-CQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQ 398
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ D+ +++ ++ MY KC + + K+F+ E++L+ WN+++ ++E+G S
Sbjct: 399 CYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSG 458
Query: 284 ESFDLLIKMMGCEEGFIPDVIT 305
E+ L M EG P+VIT
Sbjct: 459 EALRLFYGMQ--LEGVPPNVIT 478
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V L AC H + IG+ +H + + Q S+ I T L+ MY+ CG + +VF S
Sbjct: 551 VALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLY 610
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
L NA++S + + ++++ L LKPDN T V+ AC D+
Sbjct: 611 SELPLSNAMISAYALYGNLKEAIALYRSLEG-VGLKPDNITITNVLSACNHAGDI 664
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 4/149 (2%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL W +++G +N + + +F+ ++ L+P+ F+ + AC +A + G +
Sbjct: 510 NLISWTTMMNGMVQNGCSEEAI-LFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTI 568
Query: 223 HGMAAK-MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
HG + + V + +L+ MY KC + + K+F L N++I ++ G
Sbjct: 569 HGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGN 628
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L + G G PD IT+ VL
Sbjct: 629 LKEAIALYRSLEGV--GLKPDNITITNVL 655
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 132/238 (55%), Gaps = 9/238 (3%)
Query: 79 SLNKALSLLQENLHNAD-----LKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
S+N+A L + N L EA +L+ CG +K + G++VH + S N
Sbjct: 55 SVNEAFQSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSV 114
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
++TRL+ MY CG +D+ ++FD + + +F WNA++ + N L ++ E+
Sbjct: 115 FLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRV- 173
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+ + D TFPC++KACG + D +G+ VHG+A K G + VFV+N+++ MY KC +
Sbjct: 174 SGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNG 233
Query: 254 MVKLFEVMPER-NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+LF+ MPE+ ++VSWNS+I +S NG S E+ L +M + P+ T V L
Sbjct: 234 ARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQ--KASLAPNTYTFVAAL 289
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG KD G VH L S F+ N+ ++ MY+ C +R++FD + +
Sbjct: 186 ILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANS-IVGMYTKCNDLNGARQLFDRMPEK 244
Query: 163 -NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ WN+++S ++ N + L +F E+ + L P+ +TF ++AC + + G
Sbjct: 245 EDVVSWNSMISAYSSNGQSIEALRLFGEMQKAS-LAPNTYTFVAALQACEDSSFIKQGMF 303
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K +VFV+NALIAMY + + E +F M + + +SWNS++ GF +NG
Sbjct: 304 IHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGL 363
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +M + G PD++ V++++
Sbjct: 364 YHEALQFYHEMR--DAGQKPDLVAVISII 390
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
LQAC I+ G +H V S+ + N F+ N LI MY+ G ++ +F ++ +
Sbjct: 289 LQACEDSSFIKQGMFIHATVLKSSYYINVFVANA-LIAMYARFGKMGEAANIFYNMDDWD 347
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WN+++SGF +N LY + L + E+ D KPD +I A + G +H
Sbjct: 348 TISWNSMLSGFVQNGLYHEALQFYHEMR-DAGQKPDLVAVISIIAASARSGNTLHGMQIH 406
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
A K GL D+ V N+L+ MY K ++ M +F+ MP++++VSW +II G ++NG
Sbjct: 407 AYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHS 466
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L ++ EG DV+ + ++L
Sbjct: 467 RALELFREVQ--LEGIDLDVMMISSIL 491
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 117/237 (49%), Gaps = 7/237 (2%)
Query: 76 ESKSLNKALSLLQE-NLHNADLK-EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
++ S ++AL L +E L DL +L AC K I K +H + +D
Sbjct: 461 QNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL--SDL 518
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
++ ++ +Y CG + R+F+ ++ +++ W +++S + N L + L +F L +
Sbjct: 519 VLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELF-HLMKE 577
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
T ++PD+ + ++ A ++ + G +HG + G + + +++ L+ MY +C +E+
Sbjct: 578 TGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEK 637
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F + ++LV W S+I + +G + DL +M +E PD I V VL
Sbjct: 638 SRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRME--DESIAPDHIAFVAVL 692
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK +H + F + + + L+ MY+ CG SR VF+ ++ ++L W ++++ +
Sbjct: 603 GKEIHGFL-IRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYG 661
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
+ + +F + D + PD+ F V+ AC
Sbjct: 662 MHGCGRAAIDLFRRME-DESIAPDHIAFVAVLYAC 695
>gi|347954466|gb|AEP33733.1| chlororespiratory reduction 21, partial [Lepidium sativum]
Length = 805
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 143/248 (57%), Gaps = 7/248 (2%)
Query: 66 FLQEITTLCEESKSLNKALSLLQE-NLHNADL-KEATGVLLQACGHEKDIEIGKRVHELV 123
+ +I++LC+ + + +AL L++E + N + E G +LQ C +E+D+ G+++H +
Sbjct: 16 YFHQISSLCKHGE-IREALRLVKEMDFRNVRIGPEIYGEILQGCVYERDLCTGQQIHARI 74
Query: 124 SASTQF-SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTD 182
+ F + + I T+L+ Y+ C ++ +F L+ RN+F W A++ + L
Sbjct: 75 LKNGAFYARNEYIETKLLIFYAKCDALEVAQDLFSRLRVRNVFSWAAIIGLKCRIGLCEG 134
Query: 183 VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALI 242
L FVE+ + L PDN+ P V KACG + FG GVHG K GL VFV+++L
Sbjct: 135 ALLGFVEMLENGVL-PDNYVVPNVCKACGALHWSWFGRGVHGYVLKAGLHDCVFVASSLA 193
Query: 243 AMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
MYGKC +++ +F+ +PERN+V+WN+++ G+ +NG + E+ LL M +EG P
Sbjct: 194 DMYGKCGVLDDARMVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMR--KEGIEPT 251
Query: 303 VITVVTVL 310
+TV T L
Sbjct: 252 RVTVSTCL 259
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 102/207 (49%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L A + IE GK+ H ++ D I+ T ++ Y G + +FD + ++
Sbjct: 259 LSASANMGGIEEGKQSHA-IAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDRIIGKD 317
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN L+SG+ + L D + + +L L+ D+ T ++ A ++ G V
Sbjct: 318 IVTWNLLISGYVQQGLVDDAMYM-CKLMRLENLRYDSVTLSTLMSAAARTQNLNLGKEVQ 376
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ + ++ ++++ + MY KC + + K+FE E++L+ WN+++ ++++G S
Sbjct: 377 CYSIRHSFESEIVLASSTVDMYAKCGSIVDAKKVFESTAEKDLILWNTLLAAYADSGLSG 436
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M+ E P++IT +++
Sbjct: 437 EALKLFYDML--LESVPPNIITWNSII 461
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V L AC H + G+ +H + + Q S+ T L+ +Y+ CG + +VF +
Sbjct: 529 VALSACTHLVSLNFGRSIHGYIIRNFQHSSSVSFETSLVDLYAKCGDINQAEKVFGNKLY 588
Query: 162 RNLFQWNALVSGFTKNELYTDV---LSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
L NA++S + LY +V ++++ L D +KPDN TF ++ AC D+
Sbjct: 589 DELPLHNAMISAYA---LYGNVKESITLYRRL-EDMAMKPDNITFTSLLYACTHAGDI 642
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 4/149 (2%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL W +++G+ +N + + IF+ ++ L+P+ FT + AC + + FG +
Sbjct: 488 NLISWTTMMNGWVQNGCSEEAI-IFLRKMQESGLRPNAFTISVALSACTHLVSLNFGRSI 546
Query: 223 HGMAAK-MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
HG + V +L+ +Y KC + + K+F L N++I ++ G
Sbjct: 547 HGYIIRNFQHSSSVSFETSLVDLYAKCGDINQAEKVFGNKLYDELPLHNAMISAYALYGN 606
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
ES L ++ + PD IT ++L
Sbjct: 607 VKESITLYRRLE--DMAMKPDNITFTSLL 633
>gi|357516987|ref|XP_003628782.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522804|gb|AET03258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1002
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 140/250 (56%), Gaps = 9/250 (3%)
Query: 50 LSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLL-QENLHNADLKEATGVLLQACG 108
L+ + K N T +I+ LC+ K L +A+S L Q H + G LLQ C
Sbjct: 56 LNHTPKHNFFPTTNTTLHHQISFLCKNLK-LQEAISTLSQLPQHTPIGPDIYGELLQGCV 114
Query: 109 HEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF-DSLKTRNLFQ 166
+ +D+ +G ++H L+ + +S + + ++L+ +Y+ C + F + +K +NLF
Sbjct: 115 YARDLSLGLQIHAHLIKKGSSYSTNEFVESKLVILYAKCNLTRVAVHFFRNVVKNQNLFS 174
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
+ A+V +N LY + L +VE+ + PDNF P +KACGG+ +GFG G+HG
Sbjct: 175 YAAIVGLQARNGLYKEALLSYVEMM-EKGFCPDNFVVPNGLKACGGLRWIGFGRGIHGFV 233
Query: 227 AKMG--LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP--ERNLVSWNSIICGFSENGFS 282
KMG G V+V+ +L+ MYGKC +E+ K+F+ MP +RN V WNS+I G+ +NG +
Sbjct: 234 VKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQNGMN 293
Query: 283 CESFDLLIKM 292
E+ L KM
Sbjct: 294 VEAVGLFEKM 303
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 103/211 (48%), Gaps = 5/211 (2%)
Query: 104 LQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL--K 160
L+ACG + I G+ +H +V +F + T L+ MY CG D+ +VFD + +
Sbjct: 214 LKACGGLRWIGFGRGIHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNR 273
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN WN+++ G+ +N + + + +F ++ + ++P + AC + V G
Sbjct: 274 KRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEGK 333
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE-RNLVSWNSIICGFSEN 279
H + MG + + ++++ Y K +EE+ +F M ++ V+WN +I + +
Sbjct: 334 QGHALVILMGFELNYVLGSSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMISSYVQF 393
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G ++ + + M EE D +T+ ++L
Sbjct: 394 GMFEKALE-MCHWMREEENLRFDCVTLSSLL 423
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 95/202 (47%), Gaps = 5/202 (2%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT-RNL 164
AC + + +E GK+ H LV F ++++ + ++ YS G + VF S+ ++
Sbjct: 322 ACANLEAVEEGKQGHALV-ILMGFELNYVLGSSIMNFYSKVGLIEEVELVFRSMAVLKDE 380
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
WN ++S + + ++ L + + + L+ D T ++ DV G +HG
Sbjct: 381 VTWNLMISSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHG 440
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM-PERNLVSWNSIICGFSENGFSC 283
+ D+ V + ++ MY KC ++ +F ++++V WN+++ +E G S
Sbjct: 441 FCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSG 500
Query: 284 ESFDLLIKMMGCEEGFIPDVIT 305
E+ L +M E P+V++
Sbjct: 501 EALKLFFQMQ--MESVPPNVVS 520
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 80/150 (53%), Gaps = 3/150 (2%)
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
T NL W ++SG +N L + +F ++ ++P++ + + AC +A + +G
Sbjct: 550 TPNLITWTTMISGLAQNGLGYEASRVFQQMQG-AGMRPNSISITSALSACTNMALLNYGR 608
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG + + + ++ ++I MY KC +++ +F + + L +N++I ++ +G
Sbjct: 609 SIHGYVMRNFMSFSLQITTSIIDMYAKCGNLDDAKFVFIICSTKELPVYNAMISAYASHG 668
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S E+ L +++ ++G +PD IT +VL
Sbjct: 669 KSAEALALFQELV--KQGIMPDHITFTSVL 696
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + + G+ +H V + S I T +I MY+ CG D++ VF T+
Sbjct: 595 LSACTNMALLNYGRSIHGYVMRNF-MSFSLQITTSIIDMYAKCGNLDDAKFVFIICSTKE 653
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
L +NA++S + + + L++F EL + PD+ TF V+ AC
Sbjct: 654 LPVYNAMISAYASHGKSAEALALFQELVKQG-IMPDHITFTSVLSAC 699
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 121/213 (56%), Gaps = 8/213 (3%)
Query: 103 LLQACGHEKDIEIGKRVHE----LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
LLQ C K I K++H L S+ +S+ + + L Y++CG +R++FD
Sbjct: 24 LLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLL--SSLAAAYAMCGCAPHARKLFDE 81
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
L+ +LF WNA++ +T + L D L +FV++ + PDN+T+P VIKACG
Sbjct: 82 LRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEM 141
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G+ +H G D FV N+L+AMY C +E ++F++M ER LVSWN++I G+ +
Sbjct: 142 GALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFK 201
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
NG E+ + M+G +G PD TVV+VLP
Sbjct: 202 NGCVKEALMVFDWMIG--KGIEPDCATVVSVLP 232
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 108/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++ACG E+G +H S F +D + L+ MY CG +RRVFD ++ R
Sbjct: 129 VIKACGDYLLPEMGALIHARTVMSG-FDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRER 187
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
L WN +++G+ KN + L +F + ++PD T V+ C + ++ G V
Sbjct: 188 TLVSWNTMINGYFKNGCVKEALMVF-DWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRV 246
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + L D+ V N+L+ MY KC ++E +F M +R++VSW +++ G+ NG
Sbjct: 247 HALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNG-D 305
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
S LL +MM E P+ +T+ +VL
Sbjct: 306 ARSALLLCQMMQFES-VKPNFVTLASVL 332
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C + K++E+G+RVH LV D + L+ MY+ CG +++ +F + R
Sbjct: 230 VLPVCSYLKELEVGRRVHALVEVK-NLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKR 288
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +++G+ N L + ++ +KP+ T V+ AC + + G +
Sbjct: 289 DVVSWTTMMNGYILNGDARSAL-LLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCL 347
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A + L +V V ALI MY KC V ++F ++ WN+II G NG S
Sbjct: 348 HGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLS 407
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ +L +M+ E P+ T+ ++LP
Sbjct: 408 RKAIELFKQML--MEAVDPNDATLNSLLP 434
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 104/210 (49%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC ++ G+ +H + + ++ I+ T LI MY+ C S RVF +
Sbjct: 331 VLSACASLYSLKHGRCLHGW-AIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQ 389
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
WNA++SG N L + +F ++ + + P++ T ++ A + D+ +
Sbjct: 390 RTAPWNAIISGCIHNGLSRKAIELFKQMLMEA-VDPNDATLNSLLPAYAFLTDLQQARNM 448
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP--ERNLVSWNSIICGFSENG 280
HG + G + + V+ LI +Y KC +E +F +P ++++++W++II G+ +G
Sbjct: 449 HGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHG 508
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L +M+ + G P+ IT ++L
Sbjct: 509 HGETAISLFDQMV--QSGVKPNEITFTSIL 536
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 115/257 (44%), Gaps = 24/257 (9%)
Query: 43 IFKEKSSLSLSAKTNNA----------STQGLHFLQEITTLCEESKSLNKALSLLQENLH 92
+ E + + + AK NN S Q I + C + KA+ L ++ L
Sbjct: 360 VIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLM 419
Query: 93 NA-DLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPL 150
A D +AT LL A D++ + +H + S F + + T LI +YS CG
Sbjct: 420 EAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSG-FLSRIEVATILIDIYSKCGSLE 478
Query: 151 DSRRVFDSL--KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIK 208
+ +F+ + K +++ W+A+++G+ + +S+F ++ + +KP+ TF ++
Sbjct: 479 SAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMV-QSGVKPNEITFTSILH 537
Query: 209 AC--GGIADVGFGSGVHGMAA-KMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER- 264
AC G+ D G G + +M L D + +I + G+ +EE +L M R
Sbjct: 538 ACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYT--CVIDLLGRAGRLEEAYELIRTMAFRP 595
Query: 265 NLVSWNSII--CGFSEN 279
N W +++ C EN
Sbjct: 596 NHAVWGALLGSCVIHEN 612
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 131/238 (55%), Gaps = 9/238 (3%)
Query: 79 SLNKALSLLQENLHNAD-----LKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
S+N+A L + N L EA +L+ CG +K + G++VH + S N
Sbjct: 91 SVNEAFQSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSV 150
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
++TRL+ MY CG +D+ ++FD + + +F WNA++ + N L ++ E+
Sbjct: 151 FLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRV- 209
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+ + D TFPC++KACG + D G+ VHG+A K G + VFV+N+++ MY KC +
Sbjct: 210 SGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNG 269
Query: 254 MVKLFEVMPER-NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+LF+ MPE+ ++VSWNS+I +S NG S E+ L +M + P+ T V L
Sbjct: 270 ARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQ--KASLAPNTYTFVAAL 325
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG KD G VH L S F+ N+ ++ MY+ C +R++FD + +
Sbjct: 222 ILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANS-IVGMYTKCNDLNGARQLFDRMPEK 280
Query: 163 -NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ WN+++S ++ N + L +F E+ + L P+ +TF ++AC + + G
Sbjct: 281 EDVVSWNSMISAYSSNGQSIEALRLFGEMQKAS-LAPNTYTFVAALQACEDSSFIKQGMF 339
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K +VFV+NALIAMY + + E +F M + + +SWNS++ GF +NG
Sbjct: 340 IHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGL 399
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +M + G PD++ V++++
Sbjct: 400 YHEALQFYHEMR--DAGQKPDLVAVISII 426
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
LQAC I+ G +H V S+ + N F+ N LI MY+ G ++ +F ++ +
Sbjct: 325 LQACEDSSFIKQGMFIHATVLKSSYYINVFVANA-LIAMYARFGKMGEAANIFYNMDDWD 383
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WN+++SGF +N LY + L + E+ D KPD +I A + G +H
Sbjct: 384 TISWNSMLSGFVQNGLYHEALQFYHEMR-DAGQKPDLVAVISIIAASARSGNTLNGMQIH 442
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
A K GL D+ V N+L+ MY K ++ M +F+ MP++++VSW +II G ++NG
Sbjct: 443 AYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHS 502
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L ++ EG DV+ + ++L
Sbjct: 503 RALELFREVQ--LEGIDLDVMMISSIL 527
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 118/237 (49%), Gaps = 7/237 (2%)
Query: 76 ESKSLNKALSLLQE-NLHNADLK-EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
++ S ++AL L +E L DL +L AC K I K +H + + +D
Sbjct: 497 QNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYII--RKGLSDL 554
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
++ ++ +Y CG + R+F+ ++ +++ W +++S + N L + L +F L +
Sbjct: 555 VLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELF-HLMKE 613
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
T ++PD+ + ++ A ++ + G +HG + G + + +++ L+ MY +C +E+
Sbjct: 614 TGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEK 673
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F + ++LV W S+I + +G + DL +M +E PD I V VL
Sbjct: 674 SRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRME--DESIAPDHIAFVAVL 728
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK +H + F + + + L+ MY+ CG SR VF+ ++ ++L W ++++ +
Sbjct: 639 GKEIHGFL-IRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYG 697
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
+ + +F + D + PD+ F V+ AC
Sbjct: 698 MHGCGRAAIDLFRRME-DESIAPDHIAFVAVLYAC 731
>gi|347954482|gb|AEP33741.1| chlororespiratory reduction 21, partial [Thlaspi arvense]
Length = 732
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 142/261 (54%), Gaps = 18/261 (6%)
Query: 57 NNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLK------EATGVLLQACGHE 110
N +ST H +++LC+ S + +ALSL+ E D + E G +LQ C ++
Sbjct: 12 NRSSTSYFH---RVSSLCK-SGEIREALSLVTE----MDFRKIRIGPEIYGEILQGCVYK 63
Query: 111 KDIEIGKRVHELVSASTQF-SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNA 169
+++ GK++H + F + + I T+L+ Y+ C + +F L+ RN+F W A
Sbjct: 64 RNLCTGKQIHARILKKGDFYARNEYIETKLVIFYAKCDALEIAELLFSKLRVRNVFSWAA 123
Query: 170 LVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM 229
++ + L L FVE+ + + PDNF P V KACG + FG GVHG K
Sbjct: 124 IIGVKCRIGLVEGALMGFVEMLENG-IFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKA 182
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL 289
G VFV+++L MYGKC ++E K+F+ +PERN+V+WN+++ G+ +NG + E+ L
Sbjct: 183 GFHDCVFVASSLADMYGKCGVLDEARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLF 242
Query: 290 IKMMGCEEGFIPDVITVVTVL 310
M +EG P +TV T L
Sbjct: 243 SDMR--KEGVEPTRVTVSTCL 261
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%), Gaps = 4/202 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L A + IE GK+ H ++ D I+ T ++ Y G + +FD + ++
Sbjct: 261 LSASANMGGIEEGKQSHA-IAVVNGLELDNILGTSILNFYCKVGLIECAEMIFDRMVEKD 319
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN L+SG+ + L D + + + + LK D T ++ A D G V
Sbjct: 320 VVTWNLLISGYVQQGLVEDAIRMCQSMRLEN-LKFDCVTLSTLMSAAARTQDSKLGKEVQ 378
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ L D+ +++ + MY KC + + K+F+ +++L+ WN+++ ++E+G S
Sbjct: 379 SYCIRHSLESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLGAYAESGLSG 438
Query: 284 ESFDLLIKMMGCEEGFIPDVIT 305
E+ L +M E P+VIT
Sbjct: 439 EALRLFYEMQ--LESVPPNVIT 458
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 2/164 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V L AC + + G+ +H + + + + I T L+ MY+ CG + RVF S
Sbjct: 531 VALSACANLASLHYGRSIHGYIIRNQRHCSSVSIETSLVDMYAKCGDINKAERVFRSKLY 590
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
L +NA++SGF + + ++ L D +KPD+ TF ++ AC D+
Sbjct: 591 SELPLYNAMISGFAVYGNVKEAIGLYRSL-EDMGIKPDSITFTSLLSACNHAGDINQAFE 649
Query: 222 VH-GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
+ M +K GL + ++ + ++ ++L E MP +
Sbjct: 650 IFTDMVSKHGLKPCLEHYGLMVDLLASAGETDKALRLMEEMPYK 693
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 4/149 (2%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL W +++G +N + + +F+ ++ L+P+ F+ + AC +A + +G +
Sbjct: 490 NLVSWTTMMNGLVQNGCSEEAI-LFLRKMQESGLRPNVFSITVALSACANLASLHYGRSI 548
Query: 223 HGMAAK-MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
HG + V + +L+ MY KC + + ++F L +N++I GF+ G
Sbjct: 549 HGYIIRNQRHCSSVSIETSLVDMYAKCGDINKAERVFRSKLYSELPLYNAMISGFAVYGN 608
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L + + G PD IT ++L
Sbjct: 609 VKEAIGLYRSLE--DMGIKPDSITFTSLL 635
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 160/299 (53%), Gaps = 21/299 (7%)
Query: 23 KSQPQFP----------ATVIQRNKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITT 72
+S PQ P + +Q +KH+LR ++ S+ +A +++A Q + E+
Sbjct: 16 RSNPQVPNNHNPKTLSFSKNLQTHKHTLRKT--QEISVVGAAVSHSAIDQTQNL--ELRE 71
Query: 73 LCEESKSLNKALSLLQENLH-NADLKE-ATGVLLQACGHEKDIEIGKRVHELVSASTQFS 130
LC + +L +A+ L+ L +++E A LL+ C + + G RV+ELVS+S
Sbjct: 72 LCLQG-NLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCL 130
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
+ N L++M+ G LD+ VF + R++F WN LV G+ K + + L+++ +
Sbjct: 131 CVRLGNA-LLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRM 189
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
E++P+ +TFP V+K C G++D+ G +H + G DV V NALI MY KC
Sbjct: 190 LW-AEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGD 248
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
+ LF+ MP+R+ +SWN++I G+ ENG E +L M E PD+IT+ TV
Sbjct: 249 ISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMR--ELSVDPDLITMTTV 305
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 117/227 (51%), Gaps = 6/227 (2%)
Query: 84 LSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMY 143
S+++E + DL T V AC + +G+ VH V S +F D +N LI MY
Sbjct: 287 FSMMRELSVDPDLITMTTVA-SACELLDNERLGRGVHGYVVKS-EFGGDISMNNSLIQMY 344
Query: 144 SLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTF 203
S G ++ VF ++++++ W A+++ ++L + + + + L PD T
Sbjct: 345 SSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGIL-PDEITL 403
Query: 204 PCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 263
V+ AC I + G +H +A K GL+ V VSN+LI MY KC V+ +++F +
Sbjct: 404 VSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISG 463
Query: 264 RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+N+VSW S+I G N SF+ L+ +E P+ +T+++VL
Sbjct: 464 KNVVSWTSLILGLRINN---RSFEALLFFRQMKESMKPNSVTLISVL 507
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 107/208 (51%), Gaps = 6/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +++G R+HE ++ T + I++ LI MYS C ++ VF ++ +
Sbjct: 406 VLSACACIGHLDLGIRLHE-IAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGK 464
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W +L+ G N + L F ++ +KP++ T V+ AC I + G +
Sbjct: 465 NVVSWTSLILGLRINNRSFEALLFFRQMKE--SMKPNSVTLISVLSACARIGALMRGKEI 522
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A + G+ D F+ NA++ MY +C + F ++++ +WN ++ G+++ G +
Sbjct: 523 HAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQ-KKDVTAWNILLTGYAQQGQA 581
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L KM+ E PD IT +++L
Sbjct: 582 KLAVELFDKMLELE--IHPDEITFISLL 607
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 160/299 (53%), Gaps = 21/299 (7%)
Query: 23 KSQPQFP----------ATVIQRNKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITT 72
+S PQ P + +Q +KH+LR ++ S+ +A +++A Q + E+
Sbjct: 16 RSNPQVPNNHNPKTLSFSKNLQTHKHTLRKT--QEISVVGAAVSHSAIDQTQNL--ELRE 71
Query: 73 LCEESKSLNKALSLLQENLH-NADLKE-ATGVLLQACGHEKDIEIGKRVHELVSASTQFS 130
LC + +L +A+ L+ L +++E A LL+ C + + G RV+ELVS+S
Sbjct: 72 LCLQG-NLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCL 130
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
+ N L++M+ G LD+ VF + R++F WN LV G+ K + + L+++ +
Sbjct: 131 CVRLGNA-LLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRM 189
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
E++P+ +TFP V+K C G++D+ G +H + G DV V NALI MY KC
Sbjct: 190 LW-AEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGD 248
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
+ LF+ MP+R+ +SWN++I G+ ENG E +L M E PD+IT+ TV
Sbjct: 249 ISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMR--ELSVDPDLITMTTV 305
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 117/227 (51%), Gaps = 6/227 (2%)
Query: 84 LSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMY 143
S+++E + DL T V AC + +G+ VH V S +F D +N LI MY
Sbjct: 287 FSMMRELSVDPDLITMTTVA-SACELLDNERLGRGVHGYVVKS-EFGGDISMNNSLIQMY 344
Query: 144 SLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTF 203
S G ++ VF ++++++ W A+++ ++L + + + + L PD T
Sbjct: 345 SSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGIL-PDEITL 403
Query: 204 PCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 263
V+ AC I + G +H +A K GL+ V VSN+LI MY KC V+ +++F +
Sbjct: 404 VSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISG 463
Query: 264 RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+N+VSW S+I G N SF+ L+ +E P+ +T+++VL
Sbjct: 464 KNVVSWTSLILGLRINN---RSFEALLFFRQMKESMKPNSVTLISVL 507
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 107/208 (51%), Gaps = 6/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +++G R+HE ++ T + I++ LI MYS C ++ VF ++ +
Sbjct: 406 VLSACACIGHLDLGIRLHE-IAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGK 464
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W +L+ G N + L F ++ +KP++ T V+ AC I + G +
Sbjct: 465 NVVSWTSLILGLRINNRSFEALLFFRQMKE--SMKPNSVTLISVLSACARIGALMRGKEI 522
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A + G+ D F+ NA++ MY +C + F ++++ +WN ++ G+++ G +
Sbjct: 523 HAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQ-KKDVTAWNILLTGYAQQGQA 581
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L KM+ E PD IT +++L
Sbjct: 582 KLAVELFDKMLELE--IHPDEITFISLL 607
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 121/208 (58%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC D+++G ++H LV F D + T L+ +Y+ CG+ D+ +VFD + +
Sbjct: 118 VLKACARLLDLQLGVKIHTLV-VKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDK 176
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A++SG+ + + + +F L + L PD+FT V+ AC + D+ G +
Sbjct: 177 NVVSWTAIISGYIGVGKFREAIDMFRRLL-EMNLAPDSFTIVRVLSACTQLGDLNSGEWI 235
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +MG++ +VFV +L+ MY KC +E+ +F+ MPE+++VSW ++I G++ NG
Sbjct: 236 HKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLP 295
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL ++M E PD TVV VL
Sbjct: 296 KEAIDLFLQMQ--RENVKPDCYTVVGVL 321
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 100/179 (55%), Gaps = 7/179 (3%)
Query: 136 NTRLITMYSLCGFPLD----SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ L+ M C F +R +F +K N+F WN ++ G N+ + D + + +
Sbjct: 45 DNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMR 104
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
S+ L P+NFTFP V+KAC + D+ G +H + K G DVFV +L+ +Y KC ++
Sbjct: 105 SEGFL-PNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYL 163
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ K+F+ +P++N+VSW +II G+ G E+ D+ +++ E PD T+V VL
Sbjct: 164 EDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLL--EMNLAPDSFTIVRVL 220
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC D+ G+ +H+ + N F+ T L+ MY+ CG +R VFD + +
Sbjct: 219 VLSACTQLGDLNSGEWIHKCIMEMGMVRNVFV-GTSLVDMYAKCGNMEKARSVFDGMPEK 277
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W A++ G+ N L + + +F+++ + +KPD +T V+ AC + + G V
Sbjct: 278 DIVSWGAMIQGYALNGLPKEAIDLFLQMQREN-VKPDCYTVVGVLSACARLGALELGEWV 336
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
G+ + + + + ALI +Y KC + ++F+ M E++ V WN+II G + NG+
Sbjct: 337 SGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYV 396
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
SF L ++ + G PD T + +L
Sbjct: 397 KISFGLFGQVE--KLGIKPDGNTFIGLL 422
>gi|218196522|gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indica Group]
Length = 746
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 120/204 (58%), Gaps = 3/204 (1%)
Query: 107 CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQ 166
C + D+ +G+ V E S S + D ++ + L+ MY CG ++RRVFD++ +++
Sbjct: 264 CRDQGDLVLGRWVEEW-SWSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVA 322
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
WNA+++G+ +N + + +S+F + ++PD T V+ AC + + GS + G A
Sbjct: 323 WNAMITGYAQNGMSNEAISLFHSMRI-AGMRPDKITLAGVLSACSAVGALELGSELDGYA 381
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
++ GL +V+V AL+ MY KC +++ +++F MP +N+ SWN++ICG + NG E+
Sbjct: 382 SRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDEAI 441
Query: 287 DLLIKMMGCEEGFIPDVITVVTVL 310
++M EEG PD IT + VL
Sbjct: 442 QHF-QLMRNEEGLKPDDITFIGVL 464
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL A + + H L+ +D +++ LITMYS P +R+VFD + TR
Sbjct: 158 LLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHS-LITMYSYLDDPGAARKVFDGIPTR 216
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA++ + + + +V +F ++ + + P+ T V+ AC D+ G V
Sbjct: 217 DVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNAVTVAVVLAACRDQGDLVLGRWV 276
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ + D V +AL+ MY KC + E ++F+ + ++++V+WN++I G+++NG S
Sbjct: 277 EEWSWSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMS 336
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M G PD IT+ VL
Sbjct: 337 NEAISLFHSMRIA--GMRPDKITLAGVL 362
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 2/163 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E+G + S +SN ++ T L+ MY+ CG + VF + +
Sbjct: 361 VLSACSAVGALELGSELDGYASRRGLYSNVYV-GTALVDMYAKCGDLDKAIEVFRKMPCK 419
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS-G 221
N+ WNAL+ G N + + F + ++ LKPD+ TF V+ AC V G
Sbjct: 420 NVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRW 479
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
+ + + +I + + ++ + + +EE E +P++
Sbjct: 480 FNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDK 522
>gi|222631052|gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japonica Group]
Length = 746
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 120/204 (58%), Gaps = 3/204 (1%)
Query: 107 CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQ 166
C + D+ +G+ V E S S + D ++ + L+ MY CG ++RRVFD++ +++
Sbjct: 264 CRDQGDLVLGRWVEEW-SWSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVA 322
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
WNA+++G+ +N + + +S+F + ++PD T V+ AC + + GS + G A
Sbjct: 323 WNAMITGYAQNGMSNEAISLFHSMRI-AGMRPDKITLAGVLSACSAVGALELGSELDGYA 381
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
++ GL +V+V AL+ MY KC +++ +++F MP +N+ SWN++ICG + NG E+
Sbjct: 382 SRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDEAI 441
Query: 287 DLLIKMMGCEEGFIPDVITVVTVL 310
++M EEG PD IT + VL
Sbjct: 442 QHF-QLMRNEEGLKPDDITFIGVL 464
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL A + + H L+ +D +++ LITMYS P +R+VFD + TR
Sbjct: 158 LLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHS-LITMYSYLDDPGAARKVFDGIPTR 216
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA++ + + + +V +F ++ + + P+ T V+ AC D+ G V
Sbjct: 217 DVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWV 276
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ + D V +AL+ MY KC + E ++F+ + ++++V+WN++I G+++NG S
Sbjct: 277 EEWSWSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMS 336
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M G PD IT+ VL
Sbjct: 337 NEAISLFHSMRIA--GMRPDKITLAGVL 362
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E+G + S +SN ++ T L+ MY+ CG + VF + +
Sbjct: 361 VLSACSAVGALELGSELDGYASRRGLYSNVYV-GTALVDMYAKCGDLDKAIEVFRKMPCK 419
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
N+ WNAL+ G N + + F + ++ LKPD+ TF V+ AC G+ G
Sbjct: 420 NVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDG-KR 478
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
+ + + +I + + ++ + + +EE E +P++
Sbjct: 479 WFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDK 522
>gi|115463111|ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group]
gi|113578706|dbj|BAF17069.1| Os05g0307200 [Oryza sativa Japonica Group]
Length = 767
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 120/204 (58%), Gaps = 3/204 (1%)
Query: 107 CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQ 166
C + D+ +G+ V E S S + D ++ + L+ MY CG ++RRVFD++ +++
Sbjct: 264 CRDQGDLVLGRWVEEW-SWSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVA 322
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
WNA+++G+ +N + + +S+F + ++PD T V+ AC + + GS + G A
Sbjct: 323 WNAMITGYAQNGMSNEAISLFHSMRI-AGMRPDKITLAGVLSACSAVGALELGSELDGYA 381
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
++ GL +V+V AL+ MY KC +++ +++F MP +N+ SWN++ICG + NG E+
Sbjct: 382 SRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDEAI 441
Query: 287 DLLIKMMGCEEGFIPDVITVVTVL 310
++M EEG PD IT + VL
Sbjct: 442 QHF-QLMRNEEGLKPDDITFIGVL 464
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL A + + H L+ +D +++ LITMYS P +R+VFD + TR
Sbjct: 158 LLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHS-LITMYSYLDDPGAARKVFDGIPTR 216
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA++ + + + +V +F ++ + + P+ T V+ AC D+ G V
Sbjct: 217 DVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWV 276
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ + D V +AL+ MY KC + E ++F+ + ++++V+WN++I G+++NG S
Sbjct: 277 EEWSWSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMS 336
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M G PD IT+ VL
Sbjct: 337 NEAISLFHSMRIA--GMRPDKITLAGVL 362
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E+G + S +SN ++ T L+ MY+ CG + VF + +
Sbjct: 361 VLSACSAVGALELGSELDGYASRRGLYSNVYV-GTALVDMYAKCGDLDKAIEVFRKMPCK 419
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
N+ WNAL+ G N + + F + ++ LKPD+ TF V+ AC G+ G
Sbjct: 420 NVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDG-KR 478
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
+ + + +I + + ++ + + +EE E +P++
Sbjct: 479 WFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDK 522
>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 597
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 122/208 (58%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQ C +D++ G +H + F ++ ++T+LI Y G +++R+VFD + R
Sbjct: 43 ILQLCIETEDLKQGCLIHSHI-IRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPER 101
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A +SG+ KN Y D L +F ++ ++ + FT+ V++AC G+ + G +
Sbjct: 102 NVVSWTAQISGYAKNGHYQDALLVFSQMGR-AGVRANQFTYGSVLRACTGLRCLERGMQI 160
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K IG++FV +AL+ ++ KC +E+ LFE M ER++VSWN++I G++ F+
Sbjct: 161 HGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFN 220
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+SF + MMG EG PD T+ +VL
Sbjct: 221 DDSFRMFYSMMG--EGVTPDCFTLGSVL 246
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 96/190 (50%), Gaps = 18/190 (9%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKN--------ELY 180
F + +N LI Y+ + ++ S+ +++ + A+++G+ + +L+
Sbjct: 270 FGSHIDLNGSLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLF 329
Query: 181 TDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNA 240
D+ IF+E+ D+ TF ++ C IA + G +H +A K DV NA
Sbjct: 330 KDMQHIFMEI--------DDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNA 381
Query: 241 LIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI 300
L+ MY K +E+ + F M E+N++SW S+I G+ ++G+ E+ L KM EG
Sbjct: 382 LVDMYAKSGEIEDATRAFYEMKEKNVISWTSLITGYGKHGYGHEAIALYKKME--YEGLK 439
Query: 301 PDVITVVTVL 310
P+ IT +++L
Sbjct: 440 PNDITFLSLL 449
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 102/193 (52%), Gaps = 3/193 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L+AC + +E G ++H + +F + + + L+ ++S CG D+R +F+++
Sbjct: 142 GSVLRACTGLRCLERGMQIHGCIQ-KNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMS 200
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ WNA++ G+ + D +F + + + PD FT V+KA ++
Sbjct: 201 ERDVVSWNAVIGGYAAQDFNDDSFRMFYSMMGEG-VTPDCFTLGSVLKASSRANNLIKVC 259
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN- 279
+HG+ ++G + ++ +LI Y K ++ L++ M +++++S+ +I+ G++
Sbjct: 260 QIHGIIIQLGFGSHIDLNGSLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKC 319
Query: 280 GFSCESFDLLIKM 292
+S E+ DL M
Sbjct: 320 SYSREALDLFKDM 332
>gi|125525852|gb|EAY73966.1| hypothetical protein OsI_01850 [Oryza sativa Indica Group]
Length = 641
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 114/200 (57%), Gaps = 5/200 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT-RNLFQWNAL 170
D +G +VH + A T F +D + L+ MY GF D+RRVFD + RN WN L
Sbjct: 115 DARLGAQVHAMAMA-TGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGL 173
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
+S + KN+ D + +F E+ + ++P F F CV+ AC G ++ G VHGM +MG
Sbjct: 174 MSAYVKNDQCGDAIQVFGEMVW-SGIQPTEFGFSCVVNACTGSRNIEAGRQVHGMVVRMG 232
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
DVF +NAL+ MY K V+ +FE MP+ ++VSWN++I G NG + +LL+
Sbjct: 233 YDKDVFTANALVDMYVKMGRVDIASLIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLL 292
Query: 291 KMMGCEEGFIPDVITVVTVL 310
+M G +P+V T+ ++L
Sbjct: 293 QMK--SSGLVPNVFTLSSIL 310
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC ++IE G++VH +V + D L+ MY G + +F+ +
Sbjct: 208 VVNACTGSRNIEAGRQVHGMV-VRMGYDKDVFTANALVDMYVKMGRVDIASLIFEKMPDS 266
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNAL+SG N + + +++ S + L P+ FT ++KAC G G +
Sbjct: 267 DVVSWNALISGCVLNGHDHRAIELLLQMKS-SGLVPNVFTLSSILKACAGTGAFDLGRQI 325
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K+ D ++ L+ MY K F+++ K+F+ M R+L+ N++I G S G
Sbjct: 326 HGFMIKVNADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRH 385
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L ++ +EG + T+ VL
Sbjct: 386 DEALSLFYELR--KEGLGVNRTTLTAVL 411
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 79/143 (55%), Gaps = 5/143 (3%)
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
LI+ YS C P +RRVFD + W++LV+ ++ N L + F + ++ +
Sbjct: 42 HLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEG-VC 100
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
+ F+ P V+K + D G+ VH MA G DVFV+NAL+AMYG F+++ ++
Sbjct: 101 CNEFSLPVVLKC---VPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRV 157
Query: 258 F-EVMPERNLVSWNSIICGFSEN 279
F E ERN VSWN ++ + +N
Sbjct: 158 FDEAGSERNAVSWNGLMSAYVKN 180
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 2/176 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC ++G+++H + S+D+I L+ MY+ F D+R+VFD + R
Sbjct: 309 ILKACAGTGAFDLGRQIHGFMIKVNADSDDYI-GVGLVDMYAKNHFLDDARKVFDWMFHR 367
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L NAL+SG + + + LS+F EL + L + T V+K+ + V
Sbjct: 368 DLILCNALISGCSHGGRHDEALSLFYELRKEG-LGVNRTTLTAVLKSTASLEAASTTRQV 426
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
H +A K+G I D V N LI Y KC+ + + ++FE +++++ S+I S+
Sbjct: 427 HALAEKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIAFTSMITALSQ 482
>gi|30686506|ref|NP_173402.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75263158|sp|Q9FXH1.1|PPR52_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g19720; AltName: Full=Protein DYW7
gi|10086495|gb|AAG12555.1|AC007797_15 Unknown Protein [Arabidopsis thaliana]
gi|332191770|gb|AEE29891.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 894
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 156/289 (53%), Gaps = 20/289 (6%)
Query: 26 PQFPATVIQ-------RNKHSLRSIFKEKS-SLSLSAKTNNASTQGLHFLQEITTLCEES 77
P FP T + N L ++K+ S + + N + +L +L E
Sbjct: 7 PSFPKTFLNYQTPAKVENSPELHPKSRKKNLSFTKKKEPNIIPDEQFDYLCRNGSLLEAE 66
Query: 78 KSLNKALSLLQENLHNADLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
K+L+ SL Q+ + +K +T + LL++C I +G+ +H T+ D +
Sbjct: 67 KALD---SLFQQG---SKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTE--PDVFVE 118
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
T+L++MY+ CG D+R+VFDS++ RNLF W+A++ +++ + +V +F + D L
Sbjct: 119 TKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVL 178
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
PD+F FP +++ C DV G +H + K+G+ + VSN+++A+Y KC ++ K
Sbjct: 179 -PDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATK 237
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
F M ER++++WNS++ + +NG E+ +L+ +M +EG P ++T
Sbjct: 238 FFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEME--KEGISPGLVT 284
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
T ++F W A++SG N + L +F ++ + P+ T + AC + + GS
Sbjct: 314 TADVFTWTAMISGLIHNGMRYQALDMFRKMFL-AGVVPNAVTIMSAVSACSCLKVINQGS 372
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH +A KMG I DV V N+L+ MY KC +E+ K+F+ + +++ +WNS+I G+ + G
Sbjct: 373 EVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAG 432
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++++L +M + P++IT T++
Sbjct: 433 YCGKAYELFTRMQ--DANLRPNIITWNTMI 460
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 44/213 (20%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ AC K I G VH ++ F +D ++ L+ MYS CG D+R+VFDS+K ++
Sbjct: 359 VSACSCLKVINQGSEVHS-IAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKD 417
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
++ WN++++G+ + +F + D L+P+ T+
Sbjct: 418 VYTWNSMITGYCQAGYCGKAYELFTRM-QDANLRPNIITW-------------------- 456
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-----ERNLVSWNSIICGFSE 278
N +I+ Y K E + LF+ M +RN +WN II G+ +
Sbjct: 457 ---------------NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQ 501
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
NG E+ +L KM F+P+ +T++++LP
Sbjct: 502 NGKKDEALELFRKMQFSR--FMPNSVTILSLLP 532
>gi|413950564|gb|AFW83213.1| hypothetical protein ZEAMMB73_277915 [Zea mays]
Length = 611
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 118/211 (55%), Gaps = 6/211 (2%)
Query: 103 LLQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL-- 159
LLQ C + G++VH LV T + + + T+L Y+ CG D+ R F +L
Sbjct: 76 LLQCCVTAGSLRAGRQVHAALVKRGTYYCRNAYVGTKLAVCYARCGALDDAERAFGALPE 135
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+ RN F W A++ +++ L+ L+ FV + + + DNF P VIKAC G+ G G
Sbjct: 136 RDRNAFAWAAVIGLWSRAGLHGRALAGFVAML-EAGVPADNFVVPTVIKACAGLGLAGTG 194
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
VHG A K G+ V+V ++L+ +YGKC VE+ +F+ MPER +VSWN+++ + N
Sbjct: 195 RAVHGHACKAGVAECVYVMSSLVDLYGKCGEVEDARAVFDAMPERTVVSWNTMLMAYIHN 254
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ DL +M EG +P +++V+ L
Sbjct: 255 GRIDEAVDLFYEMR--VEGVLPTRVSIVSFL 283
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 20/223 (8%)
Query: 85 SLLQENLHNADLKEAT---------GVL---------LQACGHEKDIEIGKRVHELVSAS 126
++L +HN + EA GVL L A + I+ G++ H V+ S
Sbjct: 246 TMLMAYIHNGRIDEAVDLFYEMRVEGVLPTRVSIVSFLSASAGLEAIDGGRQGHA-VAVS 304
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
+ D I+ + +I Y G + VF+ ++ R+ WN +++G+ ++ L
Sbjct: 305 SGLEMDVILGSSMIHFYCKVGLVEAAEAVFEQMEGRDAVAWNLMIAGYFQDGQIDKALHT 364
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
+ + +LK D T +I AC G HG A + GL D V+ LI +Y
Sbjct: 365 CRRML-EADLKFDCVTLASIIMACVKSCITLLGIAAHGYAVRNGLDSDKTVAAGLIDLYA 423
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL 289
+E+ ++F RN V W +++ + + G + E+ +L+
Sbjct: 424 STGRIEQARRVFNATSPRNPVVWKALVSAYVDCGMNSEARNLV 466
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 160 KTR-NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
KTR NL W+ L+S ++N + +V SI ++ + E P + I A A V +
Sbjct: 508 KTRPNLRTWSLLISALSQNGMRQEVTSICCKMQ-EVESAPSPTIYSSAILAVKTAASVDY 566
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 263
G +H K GL+ V +L+ MY + M L + PE
Sbjct: 567 GKAIHACVVKKGLLLSRSVIQSLLNMYSSFDDRDTMDGLLRLFPE 611
>gi|255539733|ref|XP_002510931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550046|gb|EEF51533.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 461
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 124/210 (59%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C I+ G R+H L+ S N + +++L+ +Y+ CG+ ++ ++FD + R
Sbjct: 99 LLETCYRLNSIDHGMRIHRLIPTSILRKNTGV-SSKLLRLYASCGYMDEAHQMFDEMSNR 157
Query: 163 N--LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ F WN+L++G+++ LY D ++++ ++ + ++PD FTFP V+KACGG+ + G
Sbjct: 158 DESAFAWNSLIAGYSELGLYEDAIALYFQMDEEY-VEPDEFTFPRVLKACGGLGLIQVGE 216
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH ++G D F SNAL+ MY KC + + +FE M ++ VSWNS++ G+ +G
Sbjct: 217 AVHRDLIRLGFANDRFASNALVDMYAKCGDIVKARSIFEKMASKDSVSWNSMLTGYVRHG 276
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F +M+ ++G D + + ++L
Sbjct: 277 LIIEAFHTGRRML--QDGLELDSVAISSLL 304
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 14/210 (6%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+ACG I++G+ VH +L+ F+ND + L+ MY+ CG + +R +F+ + +
Sbjct: 202 VLKACGGLGLIQVGEAVHRDLIRLG--FANDRFASNALVDMYAKCGDIVKARSIFEKMAS 259
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ WN++++G+ ++ L + + D L+ D+ ++ ++ G
Sbjct: 260 KDSVSWNSMLTGYVRHGLIIEAFHTGRRMLQDG-LELDSVAISSLL---ANVSSFKLGVQ 315
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG + G+ D+ ++N+LI MY + + LF+ M ER++VSWNSII
Sbjct: 316 IHGWILRRGMQWDLSIANSLIVMYSSNGKLVQTRWLFDNMQERDVVSWNSIISAH----- 370
Query: 282 SCESFDLLIKMMGCEE-GFIPDVITVVTVL 310
C+ +L E G PD IT V+ L
Sbjct: 371 -CKDPQVLAYFERMENSGAFPDNITFVSAL 399
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I LI MYS G + +R +FD+++ R++ WN+++S K+ VL+ F +
Sbjct: 328 DLSIANSLIVMYSSNGKLVQTRWLFDNMQERDVVSWNSIISAHCKD---PQVLAYFERME 384
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFG 219
+ PDN TF + AC + V G
Sbjct: 385 NSGAF-PDNITFVSALSACAHLGLVRDG 411
>gi|255553249|ref|XP_002517667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543299|gb|EEF44831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 628
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 128/239 (53%), Gaps = 35/239 (14%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL +C K + +R+H + TQF+ + I RLI Y CG D+R++FD + +
Sbjct: 25 LLDSCLKSKSLRDTRRIHARI-IKTQFAYEVFIQNRLIDAYGKCGCFDDARKIFDQMPEK 83
Query: 163 NLFQWNALVS-------------------------------GFTKNELYTDVLSIFVELS 191
N+F WNA+VS GF +++ + + L+ FV++
Sbjct: 84 NVFSWNAIVSTLVKSGFLDEGARLFVSMPEPDQCSWNSLIAGFAQHDRFEEALNYFVKMH 143
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ +TF + AC G+ D+ G+ +HG+ K + DV++ +ALI +Y KC FV
Sbjct: 144 RKG-FVLNEYTFGSGLSACAGLKDLKIGTQIHGLMLKSQFLLDVYMGSALIDIYSKCGFV 202
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++F+ M ERN+VSWNS+I + +NG S E+ ++ ++MM E GF PD +T+ +V+
Sbjct: 203 DCAQRVFDGMMERNVVSWNSLITCYEQNGPSREALEIFMRMM--ESGFEPDEVTLASVV 259
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 120/245 (48%), Gaps = 40/245 (16%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL--- 159
++ AC + G +H V + +D I++ L+ MY+ CG ++R VFD +
Sbjct: 258 VVSACASLAAAKQGLEIHACVVKRDKLRDDLILSNALVDMYAKCGRINEARCVFDRMPIR 317
Query: 160 -------------KT---------------RNLFQWNALVSGFTKNELYTDVLSIFVELS 191
KT RN+ WNAL++G+T+N + L +F L
Sbjct: 318 NVVSETSMVSGYAKTASVKAARLLFTKMIERNVVSWNALIAGYTQNGENEEALRLFRMLK 377
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI------GDVFVSNALIAMY 245
+ + P ++TF ++ AC +AD+ G H K G DVFV NALI MY
Sbjct: 378 REA-ICPTHYTFGNLLNACANLADLQLGRQAHAHVLKHGFRFQYGEESDVFVGNALIDMY 436
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
KC VEE ++FE M ER+ VSWN++I G+++NG+ E+ L KM+ E PD +T
Sbjct: 437 MKCGSVEEGCRIFENMVERDYVSWNAMIVGYAQNGYGMEALGLFRKMLASGEK--PDHVT 494
Query: 306 VVTVL 310
++ L
Sbjct: 495 MIGAL 499
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 114/227 (50%), Gaps = 35/227 (15%)
Query: 96 LKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRR 154
L E T G L AC KD++IG ++H L+ S QF D + + LI +YS CGF ++R
Sbjct: 149 LNEYTFGSGLSACAGLKDLKIGTQIHGLMLKS-QFLLDVYMGSALIDIYSKCGFVDCAQR 207
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VFD + RN+ WN+L++ + +N + L IF+ + ++ +PD T V+ AC +A
Sbjct: 208 VFDGMMERNVVSWNSLITCYEQNGPSREALEIFMRMM-ESGFEPDEVTLASVVSACASLA 266
Query: 215 DVGFGSGVHGMAAKMG-LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP----------- 262
G +H K L D+ +SNAL+ MY KC + E +F+ MP
Sbjct: 267 AAKQGLEIHACVVKRDKLRDDLILSNALVDMYAKCGRINEARCVFDRMPIRNVVSETSMV 326
Query: 263 --------------------ERNLVSWNSIICGFSENGFSCESFDLL 289
ERN+VSWN++I G+++NG + E+ L
Sbjct: 327 SGYAKTASVKAARLLFTKMIERNVVSWNALIAGYTQNGENEEALRLF 373
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 36 NKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNAD 95
++ +R++ E S +S AKT + L F + I S N ++ +N N +
Sbjct: 312 DRMPIRNVVSETSMVSGYAKTASVKAARLLFTKMIE---RNVVSWNALIAGYTQNGENEE 368
Query: 96 L--------KEAT-------GVLLQACGHEKDIEIGKRVH-ELVSASTQFS----NDFII 135
+EA G LL AC + D+++G++ H ++ +F +D +
Sbjct: 369 ALRLFRMLKREAICPTHYTFGNLLNACANLADLQLGRQAHAHVLKHGFRFQYGEESDVFV 428
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
LI MY CG + R+F+++ R+ WNA++ G+ +N + L +F ++ + E
Sbjct: 429 GNALIDMYMKCGSVEEGCRIFENMVERDYVSWNAMIVGYAQNGYGMEALGLFRKMLASGE 488
Query: 196 LKPDNFTFPCVIKAC 210
KPD+ T + AC
Sbjct: 489 -KPDHVTMIGALCAC 502
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 113/203 (55%), Gaps = 12/203 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC H + G+++H L+ F ND + T L+ MY+ CG L + VFD + R
Sbjct: 206 ILPACAHAALLSEGQQIHALIHKHC-FLNDPFVATALLDMYAKCGSMLLAENVFDEMPHR 264
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL WN+++ GF KN+LY + +F E+ S L PD + V+ AC G+ ++ FG V
Sbjct: 265 NLVSWNSMIVGFVKNKLYGRAIGVFREVLS---LGPDQVSISSVLSACAGLVELDFGKQV 321
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG-FSENGF 281
HG K GL+G V+V N+L+ MY KC E+ KLF +R++V+WN +I G F F
Sbjct: 322 HGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNF 381
Query: 282 --SCESFDLLIKMMGCEEGFIPD 302
+C F +I+ EG PD
Sbjct: 382 EQACTYFQAMIR-----EGVEPD 399
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 119/235 (50%), Gaps = 4/235 (1%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
++K +A+ + +E L + + +L AC +++ GK+VH + ++
Sbjct: 278 KNKLYGRAIGVFREVLSLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVK 337
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
N+ L+ MY CG D+ ++F R++ WN ++ G + + + F + +
Sbjct: 338 NS-LVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREG- 395
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
++PD ++ + A IA + G+ +H K G + + +S++L+ MYGKC + +
Sbjct: 396 VEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAY 455
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F E N+V W ++I F ++G + E+ L +M+ EG +P+ IT V+VL
Sbjct: 456 QVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEML--NEGVVPEYITFVSVL 508
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 109/218 (50%), Gaps = 12/218 (5%)
Query: 95 DLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRR 154
DLK LL K ++ ++H + + ++ INT L+ +Y+ CG +
Sbjct: 99 DLKH----LLNNAAKLKSLKHATQIHSQLVTTNNHASLANINT-LLLLYAKCGSIHHTLL 153
Query: 155 VFDSLK--TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
+F++ + N+ W L++ +++ L+ F + + T + P++FTF ++ AC
Sbjct: 154 LFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRT-TGIYPNHFTFSAILPACAH 212
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
A + G +H + K + D FV+ AL+ MY KC + +F+ MP RNLVSWNS+
Sbjct: 213 AALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSM 272
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I GF +N + + +++ PD +++ +VL
Sbjct: 273 IVGFVKNKLYGRAIGVFREVL----SLGPDQVSISSVL 306
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 120/213 (56%), Gaps = 8/213 (3%)
Query: 103 LLQACGHEKDIEIGKRVHE----LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
LLQ C K I K++H L S+ +S+ + + L Y++ G +R++FD
Sbjct: 24 LLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLL--SSLAAAYAMFGCAPHARKLFDE 81
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
L+ +LF WNA++ +T + L D L +FV++ + PDN+T+P VIKACG
Sbjct: 82 LRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEM 141
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G+ +H G D FV N+L+AMY C +E ++F++M ER LVSWN++I G+ +
Sbjct: 142 GALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFK 201
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
NG E+ + M+G +G PD TVV+VLP
Sbjct: 202 NGCVKEALMVFDWMIG--KGIEPDCATVVSVLP 232
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 108/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++ACG E+G +H S F +D + L+ MY CG +RRVFD ++ R
Sbjct: 129 VIKACGDYLLPEMGALIHARTVMSG-FDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRER 187
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
L WN +++G+ KN + L +F + ++PD T V+ C + ++ G V
Sbjct: 188 TLVSWNTMINGYFKNGCVKEALMVF-DWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRV 246
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + L D+ V N+L+ MY KC ++E +F M +R++VSW +++ G+ NG
Sbjct: 247 HALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNG-D 305
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
S LL +MM E P+ +T+ +VL
Sbjct: 306 ARSALLLCQMMQFES-VKPNFVTLASVL 332
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C + K++E+G+RVH LV D + L+ MY+ CG +++ +F + R
Sbjct: 230 VLPVCSYLKELEVGRRVHALVEVK-NLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKR 288
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +++G+ N L + ++ +KP+ T V+ AC + + G +
Sbjct: 289 DVVSWTTMMNGYILNGDARSAL-LLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCL 347
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A + L +V V ALI MY KC V ++F ++ WN+II G NG S
Sbjct: 348 HGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLS 407
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ +L +M+ E P+ T+ ++LP
Sbjct: 408 RKAIELFKQML--MEAVDPNDATLNSLLP 434
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 104/210 (49%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC ++ G+ +H + + ++ I+ T LI MY+ C S RVF +
Sbjct: 331 VLSACASLYSLKHGRCLHGW-AIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQ 389
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
WNA++SG N L + +F ++ + + P++ T ++ A + D+ +
Sbjct: 390 RTAPWNAIISGCIHNGLSRKAIELFKQMLMEA-VDPNDATLNSLLPAYAFLTDLQQARNM 448
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP--ERNLVSWNSIICGFSENG 280
HG + G + + V+ LI +Y KC +E +F +P ++++++W++II G+ +G
Sbjct: 449 HGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHG 508
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L +M+ + G P+ IT ++L
Sbjct: 509 HGETAISLFDQMV--QSGVKPNEITFTSIL 536
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 115/257 (44%), Gaps = 24/257 (9%)
Query: 43 IFKEKSSLSLSAKTNNA----------STQGLHFLQEITTLCEESKSLNKALSLLQENLH 92
+ E + + + AK NN S Q I + C + KA+ L ++ L
Sbjct: 360 VIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLM 419
Query: 93 NA-DLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPL 150
A D +AT LL A D++ + +H + S F + + T LI +YS CG
Sbjct: 420 EAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSG-FLSRIEVATILIDIYSKCGSLE 478
Query: 151 DSRRVFDSL--KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIK 208
+ +F+ + K +++ W+A+++G+ + +S+F ++ + +KP+ TF ++
Sbjct: 479 SAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMV-QSGVKPNEITFTSILH 537
Query: 209 AC--GGIADVGFGSGVHGMAA-KMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER- 264
AC G+ D G G + +M L D + +I + G+ +EE +L M R
Sbjct: 538 ACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYT--CVIDLLGRAGRLEEAYELIRTMAFRP 595
Query: 265 NLVSWNSII--CGFSEN 279
N W +++ C EN
Sbjct: 596 NHAVWGALLGSCVIHEN 612
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 122/208 (58%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L++C D+++GK+VH + ++ NDF+ T L+ MY+ F D+ +F+ L R
Sbjct: 538 ILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFV-GTALVDMYAKNRFLEDAETIFNRLIKR 596
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+LF W +V+G+ ++ + F+++ + +KP+ FT + C IA + G +
Sbjct: 597 DLFAWTVIVAGYAQDGQGEKAVKCFIQMQREG-VKPNEFTLASSLSGCSRIATLDSGRQL 655
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H MA K G GD+FV++AL+ MY KC VE+ +F+ + R+ VSWN+IICG+S++G
Sbjct: 656 HSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQG 715
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ M+ +EG +PD +T + VL
Sbjct: 716 GKALKAFEAML--DEGTVPDEVTFIGVL 741
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 119/215 (55%), Gaps = 5/215 (2%)
Query: 96 LKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV 155
L++ +G +L+ C + D+ GK +H V S + + N+ L+ +Y+ CG + +V
Sbjct: 128 LRQYSG-MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNS-LVNVYAKCGSANYACKV 185
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
F + R++ W AL++GF + +++F E+ + ++ + FT+ +KAC D
Sbjct: 186 FGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREG-VEANEFTYATALKACSMCLD 244
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
+ FG VH A K+G D+FV +AL+ +Y KC + ++F MP++N VSWN+++ G
Sbjct: 245 LEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNG 304
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F++ G + + +L +M G E F T+ TVL
Sbjct: 305 FAQMGDAEKVLNLFCRMTGSEINF--SKFTLSTVL 337
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 108/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ A D+ G+ +H V F D + L+TMY G D RVF++ R
Sbjct: 437 LVSAATDLGDLYYGESIHACV-CKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNR 495
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WNAL+SGF NE L IF ++ ++ P+ +TF ++++C ++DV G V
Sbjct: 496 DLISWNALLSGFHDNETCDTGLRIFNQMLAEG-FNPNMYTFISILRSCSSLSDVDLGKQV 554
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K L G+ FV AL+ MY K F+E+ +F + +R+L +W I+ G++++G
Sbjct: 555 HAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQG 614
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ I+M EG P+ T+ + L
Sbjct: 615 EKAVKCFIQMQ--REGVKPNEFTLASSL 640
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 122/234 (52%), Gaps = 6/234 (2%)
Query: 77 SKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
S ++N + +E + + AT L+AC D+E GK+VH FS D +
Sbjct: 211 SGAVNLFCEMRREGVEANEFTYATA--LKACSMCLDLEFGKQVHAEAIKVGDFS-DLFVG 267
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
+ L+ +Y+ CG + + RVF + +N WNAL++GF + VL++F ++ +E+
Sbjct: 268 SALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTG-SEI 326
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
FT V+K C ++ G VH +A ++G D F+S L+ MY KC + +K
Sbjct: 327 NFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALK 386
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F + + ++VSW++II + G S E+ ++ +M G IP+ T+ +++
Sbjct: 387 VFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMR--HSGVIPNQFTLASLV 438
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 106/209 (50%), Gaps = 4/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+ C + ++ G+ VH L + D I+ L+ MYS CG D+ +VF ++
Sbjct: 335 TVLKGCANSGNLRAGQIVHSL-AIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIED 393
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ W+A+++ + + +F + + + P+ FT ++ A + D+ +G
Sbjct: 394 PDVVSWSAIITCLDQKGQSREAAEVFKRMRH-SGVIPNQFTLASLVSAATDLGDLYYGES 452
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K G D V NAL+ MY K V++ ++FE R+L+SWN+++ GF +N
Sbjct: 453 IHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNET 512
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +M+ EGF P++ T +++L
Sbjct: 513 CDTGLRIFNQMLA--EGFNPNMYTFISIL 539
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ+C KD+ +GK+VHE + N +IINT L+ +Y CG ++RR+FD +
Sbjct: 50 LLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINT-LLKLYVHCGSVNEARRLFDKFSNK 108
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN ++SG+ L + ++F L L+PD FTF ++ AC A + +G V
Sbjct: 109 SVVSWNVMISGYAHRGLGQEAFNLFT-LMQQEGLEPDKFTFVSILSACSSPAALNWGREV 167
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + GL + V NALI+MY KC V + ++F+ M R+ VSW ++ ++E+G++
Sbjct: 168 HVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYA 227
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
ES M+ +EG P IT + VL
Sbjct: 228 QESLKTYHAML--QEGVRPSRITYMNVL 253
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 122/233 (52%), Gaps = 6/233 (2%)
Query: 78 KSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
+SL ++LQE + + + +L ACG +E GK++H + S S D ++T
Sbjct: 229 ESLKTYHAMLQEGVRPSRITYMN--VLSACGSLAALEKGKQIHAQIVESEHHS-DVRVST 285
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L MY CG D+R VF+ L R++ WN ++ G + + +F + + +
Sbjct: 286 ALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKEC-VA 344
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
PD T+ ++ AC + G +H A K GL+ DV NALI MY K +++ ++
Sbjct: 345 PDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQV 404
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ MP+R++VSW +++ G+++ G ESF KM+ ++G + IT + VL
Sbjct: 405 FDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKML--QQGVEANKITYMCVL 455
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 108/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + GK +H + +D LI MYS G D+R+VFD + R
Sbjct: 353 ILSACARPGGLACGKEIHAR-AVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKR 411
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W ALV G+ + S F ++ ++ + T+ CV+KAC + +G +
Sbjct: 412 DVVSWTALVGGYADCGQVVESFSTFKKMLQQG-VEANKITYMCVLKACSNPVALKWGKEI 470
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G+ D+ V+NAL++MY KC VE+ +++ E M R++V+WN++I G ++NG
Sbjct: 471 HAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRG 530
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ ++M EE P+ T V V+
Sbjct: 531 LEALQKF-EVMKSEE-MRPNATTFVNVM 556
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D++ + ++++C D+ G VH + G+ +V++ N L+ +Y C V E +LF
Sbjct: 43 DSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLF 102
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +++VSWN +I G++ G E+F+L M +EG PD T V++L
Sbjct: 103 DKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQ--QEGLEPDKFTFVSIL 152
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC + ++ GK +H V + F+ D + L++MY CG D+ RV + + TR
Sbjct: 454 VLKACSNPVALKWGKEIHAEVVKAGIFA-DLAVANALMSMYFKCGSVEDAIRVSEGMSTR 512
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
++ WN L+ G +N + L F E+ E++P+ TF V+ AC
Sbjct: 513 DVVTWNTLIGGLAQNGRGLEALQKF-EVMKSEEMRPNATTFVNVMSAC 559
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 122/208 (58%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L++C D+++GK+VH + ++ NDF+ T L+ MY+ F D+ +F+ L R
Sbjct: 297 ILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFV-GTALVDMYAKNRFLEDAETIFNRLIKR 355
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+LF W +V+G+ ++ + F+++ + +KP+ FT + C IA + G +
Sbjct: 356 DLFAWTVIVAGYAQDGQGEKAVKCFIQMQREG-VKPNEFTLASSLSGCSRIATLDSGRQL 414
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H MA K G GD+FV++AL+ MY KC VE+ +F+ + R+ VSWN+IICG+S++G
Sbjct: 415 HSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQG 474
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ M+ +EG +PD +T + VL
Sbjct: 475 GKALKAFEAML--DEGTVPDEVTFIGVL 500
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 111/208 (53%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C + D+ GK +H V S + + N+ L+ +Y+ CG + +VF + R
Sbjct: 197 ILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNS-LVNVYAKCGSANYACKVFGEIPER 255
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W AL++GF E Y L IF ++ ++ P+ +TF ++++C ++DV G V
Sbjct: 256 DVVSWTALITGFVA-EGYGSGLRIFNQMLAEG-FNPNMYTFISILRSCSSLSDVDLGKQV 313
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K L G+ FV AL+ MY K F+E+ +F + +R+L +W I+ G++++G
Sbjct: 314 HAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQG 373
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ I+M EG P+ T+ + L
Sbjct: 374 EKAVKCFIQMQ--REGVKPNEFTLASSL 399
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ A D G+ +H V F +D +I+ +TMY + + F ++
Sbjct: 96 LISAAASLGDNHYGESIHACV-CKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIE 154
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL N L+SGF E I ++L + +P+ +TF ++K C D+ G +
Sbjct: 155 NLASRNNLLSGFCDTETCDQGPRILIQLLVEG-FEPNMYTFISILKTCASKGDLNEGKAI 213
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K G+ D + N+L+ +Y KC K+F +PER++VSW ++I GF G+
Sbjct: 214 HGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYG 273
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +M+ EGF P++ T +++L
Sbjct: 274 -SGLRIFNQMLA--EGFNPNMYTFISIL 298
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
+ L+ +Y C +R+V + + +++ QWN +S + + +F L T +
Sbjct: 28 SSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFY-LMRHTRI 86
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
+ + F F +I A + D +G +H K G D+ +SNA + MY K VE +
Sbjct: 87 RLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQ 146
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ M NL S N+++ GF + + +LI+++ EGF P++ T +++L
Sbjct: 147 FFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLL--VEGFEPNMYTFISIL 198
>gi|225466051|ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic [Vitis vinifera]
gi|296084180|emb|CBI24568.3| unnamed protein product [Vitis vinifera]
Length = 516
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 120/210 (57%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C + + G R+H L+ S ++++L+ +Y+ G ++ R+FD + R
Sbjct: 85 LLETCFQLQAFDHGIRIHRLIPTSL-LRKSVALSSKLLRLYASIGRIEEAHRLFDQMSRR 143
Query: 163 N--LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
N F WN+L+SG+ + LY D ++++ ++ + + PD FTFP V+KACGGI + G
Sbjct: 144 NRSAFAWNSLISGYAELGLYEDAMALYFQMEEEG-VVPDRFTFPRVLKACGGIGSISVGE 202
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH + G D FV NAL+ MY KC + + K+F+ + R+ VSWNS++ G+ +G
Sbjct: 203 EVHRHVVRCGFADDGFVLNALVDMYAKCGDIVKARKVFDKIVCRDSVSWNSMLTGYIRHG 262
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ + +M+ + GF PD + + TV+
Sbjct: 263 LPLQALSIFRRML--QYGFEPDAVAISTVV 290
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 110/208 (52%), Gaps = 10/208 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG I +G+ VH V F++D + L+ MY+ CG + +R+VFD + R
Sbjct: 188 VLKACGGIGSISVGEEVHRHV-VRCGFADDGFVLNALVDMYAKCGDIVKARKVFDKIVCR 246
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN++++G+ ++ L LSIF + +PD V+ G+ + +
Sbjct: 247 DSVSWNSMLTGYIRHGLPLQALSIFRRMLQ-YGFEPDAVAISTVVT---GVPSLKLAGQI 302
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + G+ ++ ++N+LI +Y +++ LF+ MPER++VSWNSII ++ +
Sbjct: 303 HGWVLRRGVQWNLSIANSLIVLYSNHGKLDQACWLFDHMPERDVVSWNSIISAHRKDLKA 362
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
F + K +PDV+T V++L
Sbjct: 363 ITYFSRMQK-----ADVLPDVVTFVSLL 385
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D F +++ C + G +H + L V +S+ L+ +Y +EE +LF
Sbjct: 78 DAQIFSSLLETCFQLQAFDHGIRIHRLIPTSLLRKSVALSSKLLRLYASIGRIEEAHRLF 137
Query: 259 EVMPERN--LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ M RN +WNS+I G++E G ++ L +M EEG +PD T VL
Sbjct: 138 DQMSRRNRSAFAWNSLISGYAELGLYEDAMALYFQME--EEGVVPDRFTFPRVL 189
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
I LI +YS G + +FD + R++ WN+++S K+ ++ F +
Sbjct: 317 IANSLIVLYSNHGKLDQACWLFDHMPERDVVSWNSIISAHRKD---LKAITYFSRMQK-A 372
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK-MGLIGDVFVSNALIAMYGKCAFVEE 253
++ PD TF ++ AC + V G G+ M + G+I + ++ +YG+ +EE
Sbjct: 373 DVLPDVVTFVSLLSACAHLGLVKDGEGLFSMMREDYGMIPSMEHYACMVNLYGRAGLIEE 432
Query: 254 MVKLFE--VMPERNLVSWNSII--CGFSEN 279
++ E + E W +++ C F N
Sbjct: 433 AYEIIEKRMEFEAGPTVWGALLYACYFHHN 462
>gi|125524838|gb|EAY72952.1| hypothetical protein OsI_00823 [Oryza sativa Indica Group]
Length = 658
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 144/269 (53%), Gaps = 10/269 (3%)
Query: 46 EKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQ 105
E +S AK + + +I LC + L +AL LL + +A + G ++Q
Sbjct: 44 EAASAPRGAKNSRSRAPRTDVDVQIERLCRAGE-LEEALRLLGSDGVDA---RSYGAVVQ 99
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSN--DFIINTRLITMYSLCGFPLDSRRVFDSL-KTR 162
C + +E GKR H LV AS + D ++ +L+ MY CG ++R+VFD + +
Sbjct: 100 LCSDLRSLEAGKRAHFLVRASGVGKDGMDSVLGRKLVLMYVKCGDLENARKVFDEMPQVS 159
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +L+SG+ K + D + +F ++ + ++PD CV+K G+ + G V
Sbjct: 160 DVRVWTSLMSGYAKAGEFQDGVLLFRQMHC-SGVRPDAHAISCVLKCIAGLGSIADGEVV 218
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K+GL V NALIA+Y +C V+ +++F+ MP R+++SWNS+I G NG+
Sbjct: 219 HGYLEKLGLGVQCAVGNALIALYSRCGHVDGSLQVFDGMPHRDVISWNSVISGCFSNGWH 278
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+S +L KM EG + +T++ VLP
Sbjct: 279 GKSIELFAKMW--SEGLEINPVTMLGVLP 305
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 102/178 (57%), Gaps = 4/178 (2%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTR-NLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
+ ++L+ MY CG +R+VFD++ ++ NL WN ++ G+ K + + L +F E D
Sbjct: 343 LGSKLVFMYVKCGELGYARKVFDAMSSKSNLHAWNLMMGGYAKLGKFQESLLLF-EKMHD 401
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+ PD T C++K G++ V G VHG K G V NALI+ Y K +E+
Sbjct: 402 CGITPDEHTISCLLKCITGLSGVMDGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIED 461
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ +F+ MP+R+++SWNSII G + NG ++ +L ++M EG D T+++V+P
Sbjct: 462 ALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMW--LEGQELDSTTLLSVMP 517
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 74/142 (52%), Gaps = 1/142 (0%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI+ Y+ D+ VFD + R++ WN+++ G N LY + +FV + + + +
Sbjct: 449 LISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQ-EL 507
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D+ T V+ AC G VHG + + GLI + + NAL+ MY C+ K+F
Sbjct: 508 DSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIF 567
Query: 259 EVMPERNLVSWNSIICGFSENG 280
M ++N+VSW ++I ++ G
Sbjct: 568 RNMEQKNVVSWTAMITSYTRAG 589
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 21/190 (11%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ LI +YS CG S +VFD + R++ WN+++SG N + + +F ++ S+
Sbjct: 233 VGNALIALYSRCGHVDGSLQVFDGMPHRDVISWNSVISGCFSNGWHGKSIELFAKMWSEG 292
Query: 195 -ELKPDNFTFPCVIKACGGIADVGF---GSGVHGMAAKMGLIG---------DVFVSNAL 241
E+ P T V+ AC A++G+ G +HG + K GL+ D + + L
Sbjct: 293 LEINP--VTMLGVLPAC---AELGYNLVGRVLHGYSVKTGLLWEFESLENGIDENLGSKL 347
Query: 242 IAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI 300
+ MY KC + K+F+ M + NL +WN ++ G+++ G ES L KM C G
Sbjct: 348 VFMYVKCGELGYARKVFDAMSSKSNLHAWNLMMGGYAKLGKFQESLLLFEKMHDC--GIT 405
Query: 301 PDVITVVTVL 310
PD T+ +L
Sbjct: 406 PDEHTISCLL 415
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC IG VH S T ++ + L+ MYS C + ++F +++ +
Sbjct: 515 VMPACVQSHYSFIGGVVHGY-SVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQK 573
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELS 191
N+ W A+++ +T+ + V +F E+
Sbjct: 574 NVVSWTAMITSYTRAGHFDKVAGLFQEMG 602
>gi|356529889|ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic-like [Glycine max]
Length = 526
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 123/217 (56%), Gaps = 10/217 (4%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
E LL+ C + I G RVH L+ S N I+++L+ +Y+ CG+ D+ +FD
Sbjct: 91 EIYASLLETCYRFQAILHGIRVHRLIPTSLLHKN-VGISSKLLRLYASCGYLDDAHDLFD 149
Query: 158 SLKTRNL--FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
+ R+ F WN+L+SG+ + Y + ++++ ++ + ++ D FTFP V+K C GI
Sbjct: 150 QMAKRDTSAFPWNSLISGYAQVGHYDEAIALYFQMVEEG-VEADLFTFPRVLKVCAGIGS 208
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
V G VH A + G D F+ NAL+ MY KC + + K+F+ MP R+ VSWNS++
Sbjct: 209 VQVGEEVHRHAIRAGFAADGFILNALVDMYSKCGDIVKARKVFDKMPHRDPVSWNSMLTA 268
Query: 276 FSENGFSCESFDLLIKMM--GCEEGFIPDVITVVTVL 310
+ +G ++ ++ +M+ GCE PD +++ TVL
Sbjct: 269 YVHHGLEVQAMNIFRQMLLEGCE----PDSVSISTVL 301
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 112/208 (53%), Gaps = 10/208 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C +++G+ VH + ++ FI+N L+ MYS CG + +R+VFD + R
Sbjct: 199 VLKVCAGIGSVQVGEEVHRHAIRAGFAADGFILNA-LVDMYSKCGDIVKARKVFDKMPHR 257
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN++++ + + L ++IF ++ + +PD+ + V+ G++ +G G +
Sbjct: 258 DPVSWNSMLTAYVHHGLEVQAMNIFRQMLLEG-CEPDSVSISTVLT---GVSSLGLGVQI 313
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG G ++ ++N+LI MY +E+ +F +MPER++VSWNSII +
Sbjct: 314 HGWVISQGHEWNLSIANSLIMMYSNHGRLEKARWVFNLMPERDVVSWNSIISAHCKRR-- 371
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +M G G PD IT V++L
Sbjct: 372 -EALAFFEQMEGA--GVQPDKITFVSIL 396
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+E S + +K D + +++ C + G VH + L +V +S+ L+ +Y
Sbjct: 78 LEASVEKGIKIDPEIYASLLETCYRFQAILHGIRVHRLIPTSLLHKNVGISSKLLRLYAS 137
Query: 248 CAFVEEMVKLFEVMPERNLVS--WNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
C ++++ LF+ M +R+ + WNS+I G+++ G E+ L +M+ EEG D+ T
Sbjct: 138 CGYLDDAHDLFDQMAKRDTSAFPWNSLISGYAQVGHYDEAIALYFQMV--EEGVEADLFT 195
Query: 306 VVTVL 310
VL
Sbjct: 196 FPRVL 200
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
+G ++H V + N I N+ LI MYS G +R VF+ + R++ WN+++S
Sbjct: 309 LGVQIHGWVISQGHEWNLSIANS-LIMMYSNHGRLEKARWVFNLMPERDVVSWNSIISAH 367
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
K + L+ F ++ ++PD TF ++ AC
Sbjct: 368 CKRR---EALAFFEQMEG-AGVQPDKITFVSILSACA 400
>gi|125551786|gb|EAY97495.1| hypothetical protein OsI_19422 [Oryza sativa Indica Group]
Length = 620
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 120/209 (57%), Gaps = 3/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V+L AC E D+ +G+ V E S S D ++ + L+ MY CG ++RRVFDS+
Sbjct: 235 VVLAACRDEGDLVLGRWVEEW-SKSAGMETDSLVGSALVGMYEKCGEIAEARRVFDSIID 293
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+++ WNA+++G+ +N + + +S+F + + PD T V+ AC + + GS
Sbjct: 294 KDVVAWNAMITGYAQNGMSNEAISLFHNMKK-AGVCPDKITLAGVLSACSAVGALELGSE 352
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+ G A+ GL +V+V AL+ MY KC +++ +++F M +N+ SWN++ICG + NG
Sbjct: 353 LDGYASCRGLYNNVYVGTALVDMYAKCGDLDKAIEVFRKMRCKNVASWNALICGLAFNGQ 412
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ ++M E+G PD IT + VL
Sbjct: 413 GDEAIQHF-ELMRNEDGLKPDDITFIGVL 440
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 104/191 (54%), Gaps = 3/191 (1%)
Query: 120 HELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNEL 179
H L+ S+D +++ LIT+YS P +R+VF+ + +R++ WNA++ + + +
Sbjct: 151 HALLEKIDLNSHDHTVHS-LITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGM 209
Query: 180 YTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSN 239
+V + ++ D + P+ T V+ AC D+ G V + G+ D V +
Sbjct: 210 NGEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSLVGS 269
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
AL+ MY KC + E ++F+ + ++++V+WN++I G+++NG S E+ L M + G
Sbjct: 270 ALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMK--KAGV 327
Query: 300 IPDVITVVTVL 310
PD IT+ VL
Sbjct: 328 CPDKITLAGVL 338
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 89/188 (47%), Gaps = 6/188 (3%)
Query: 81 NKALSLLQENLHNADL---KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
N+A+SL N+ A + K +L AC +E+G + S ++N ++ T
Sbjct: 313 NEAISLFH-NMKKAGVCPDKITLAGVLSACSAVGALELGSELDGYASCRGLYNNVYV-GT 370
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L+ MY+ CG + VF ++ +N+ WNAL+ G N + + F + ++ LK
Sbjct: 371 ALVDMYAKCGDLDKAIEVFRKMRCKNVASWNALICGLAFNGQGDEAIQHFELMRNEDGLK 430
Query: 198 PDNFTFPCVIKACGGIADVGFGS-GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
PD+ TF V+ AC V G + + ++ +I + + ++ + + +EE+
Sbjct: 431 PDDITFIGVLSACVHAGLVKDGKRWFNSLTSEFQIIPKIEHYSCMVDLLARSGHLEEVWD 490
Query: 257 LFEVMPER 264
E +P++
Sbjct: 491 FIEKIPDK 498
>gi|255641788|gb|ACU21163.1| unknown [Glycine max]
Length = 481
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 123/217 (56%), Gaps = 10/217 (4%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
E LL+ C + I G RVH L+ S N I+++L+ +Y+ CG+ D+ +FD
Sbjct: 91 EIYASLLETCYRFQAILHGIRVHRLIPTSLLHKN-VGISSKLLRLYASCGYLDDAHDLFD 149
Query: 158 SLKTRNL--FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
+ R+ F WN+L+SG+ + Y + ++++ ++ + ++ D FTFP V+K C GI
Sbjct: 150 QMAKRDTSAFPWNSLISGYAQVGHYDEAIALYFQMVEEG-VEADLFTFPRVLKVCAGIGS 208
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
V G VH A + G D F+ NAL+ MY KC + + K+F+ MP R+ VSWNS++
Sbjct: 209 VQVGEEVHRHAIRAGFAADGFILNALVDMYSKCGDIVKARKVFDKMPHRDPVSWNSMLTA 268
Query: 276 FSENGFSCESFDLLIKMM--GCEEGFIPDVITVVTVL 310
+ +G ++ ++ +M+ GCE PD +++ TVL
Sbjct: 269 YVHHGLEVQAMNIFRQMLLEGCE----PDSVSISTVL 301
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 112/208 (53%), Gaps = 10/208 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C +++G+ VH + ++ FI+N L+ MYS CG + +R+VFD + R
Sbjct: 199 VLKVCAGIGSVQVGEEVHRHAIRAGFAADGFILNA-LVDMYSKCGDIVKARKVFDKMPHR 257
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN++++ + + L ++IF ++ + +PD+ + V+ G++ +G G +
Sbjct: 258 DPVSWNSMLTAYVHHGLEVQAMNIFRQMLLEG-CEPDSVSISTVLT---GVSSLGLGVQI 313
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG G ++ ++N+LI MY +E+ +F +MPER++VSWNSII +
Sbjct: 314 HGWVISQGHEWNLSIANSLIMMYSNHGRLEKARWVFNLMPERDVVSWNSIISAHCKRR-- 371
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +M G G PD IT V++L
Sbjct: 372 -EALAFFEQMEGA--GVQPDKITFVSIL 396
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+E S + +K D + +++ C + G VH + L +V +S+ L+ +Y
Sbjct: 78 LEASVEKGIKIDPEIYASLLETCYRFQAILHGIRVHRLIPTSLLHKNVGISSKLLRLYAS 137
Query: 248 CAFVEEMVKLFEVMPERNLVS--WNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
C ++++ LF+ M +R+ + WNS+I G+++ G E+ L +M+ EEG D+ T
Sbjct: 138 CGYLDDAHDLFDQMAKRDTSAFPWNSLISGYAQVGHYDEAIALYFQMV--EEGVEADLFT 195
Query: 306 VVTVL 310
VL
Sbjct: 196 FPRVL 200
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 66/140 (47%), Gaps = 6/140 (4%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
+G ++H V + N I N+ LI MYS G +R VF+ + R++ WN+++S
Sbjct: 309 LGVQIHGWVISQGHEWNLSIANS-LIMMYSNHGRLEKARWVFNLMPERDVVSWNSIISAH 367
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG-MAAKMGLIG 233
K + L+ F ++ ++PD TF ++ AC + + G + M K +
Sbjct: 368 CKRR---EALAFFEQMEG-AGVQPDKITFVSILSACAYLGLLKDGERLFALMCGKYKIKP 423
Query: 234 DVFVSNALIAMYGKCAFVEE 253
+ ++ +YG+ +++
Sbjct: 424 IMEHYGCMVNLYGRAGLIKK 443
>gi|297723953|ref|NP_001174340.1| Os05g0313600 [Oryza sativa Japonica Group]
gi|222631076|gb|EEE63208.1| hypothetical protein OsJ_18018 [Oryza sativa Japonica Group]
gi|255676232|dbj|BAH93068.1| Os05g0313600 [Oryza sativa Japonica Group]
Length = 620
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 120/209 (57%), Gaps = 3/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V+L AC E D+ +G+ V E S S D ++ + L+ MY CG ++RRVFDS+
Sbjct: 235 VVLAACRDEGDLVLGRWVEEW-SKSAGMETDSLVGSALVGMYEKCGEIAEARRVFDSIID 293
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+++ WNA+++G+ +N + + +S+F + + PD T V+ AC + + GS
Sbjct: 294 KDVVAWNAMITGYAQNGMSNEAISLFHNMKK-AGVCPDKITLAGVLSACSAVGALELGSE 352
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+ G A+ GL +V+V AL+ MY KC +++ +++F M +N+ SWN++ICG + NG
Sbjct: 353 LDGYASCRGLYNNVYVGTALVDMYAKCGDLDKAIEVFRKMRCKNVASWNALICGLAFNGQ 412
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ ++M E+G PD IT + VL
Sbjct: 413 GDEAIQHF-ELMRNEDGLKPDDITFIGVL 440
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 104/191 (54%), Gaps = 3/191 (1%)
Query: 120 HELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNEL 179
H L+ S+D +++ LIT+YS P +R+VF+ + +R++ WNA++ + + +
Sbjct: 151 HALLEKIDLNSHDHTVHS-LITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGM 209
Query: 180 YTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSN 239
+V + ++ D + P+ T V+ AC D+ G V + G+ D V +
Sbjct: 210 NGEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSLVGS 269
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
AL+ MY KC + E ++F+ + ++++V+WN++I G+++NG S E+ L M + G
Sbjct: 270 ALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMK--KAGV 327
Query: 300 IPDVITVVTVL 310
PD IT+ VL
Sbjct: 328 CPDKITLAGVL 338
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 88/188 (46%), Gaps = 6/188 (3%)
Query: 81 NKALSLLQENLHNADL---KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
N+A+SL N+ A + K +L AC +E+G + S ++N ++ T
Sbjct: 313 NEAISLFH-NMKKAGVCPDKITLAGVLSACSAVGALELGSELDGYASCRGLYNNVYV-GT 370
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L+ MY+ CG + VF ++ +N+ WNAL+ G N + + F + ++ LK
Sbjct: 371 ALVDMYAKCGDLDKAIEVFRKMRCKNVASWNALICGLAFNGQGDEAIQHFELMRNEDGLK 430
Query: 198 PDNFTFPCVIKACGGIADVGFGS-GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
PD+ TF V+ AC V G + + ++ +I + + ++ + +EE+
Sbjct: 431 PDDITFIGVLSACVHAGLVKDGKRWFNSLTSEFQIIPKIEHYSCMVDPLARSGHLEEVWD 490
Query: 257 LFEVMPER 264
E +P++
Sbjct: 491 FIEKIPDK 498
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 113/200 (56%), Gaps = 5/200 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT-RNLFQWNAL 170
D ++G +VH + A T F +D + L+ MY GF D+RRVFD + RN WN L
Sbjct: 115 DAQLGAQVHAMAMA-TGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGL 173
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
+S + KN+ D + +F E+ + ++P F F CV+ AC G ++ G VH M +MG
Sbjct: 174 MSAYVKNDQCGDAIQVFGEMVW-SGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMG 232
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
DVF +NAL+ MY K V+ +FE MP+ ++VSWN++I G NG + +LL+
Sbjct: 233 YEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLL 292
Query: 291 KMMGCEEGFIPDVITVVTVL 310
+M G +P+V + ++L
Sbjct: 293 QMK--SSGLVPNVFMLSSIL 310
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC ++I+ G++VH +V + D L+ MY G + +F+ +
Sbjct: 208 VVNACTGSRNIDAGRQVHAMV-VRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDS 266
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNAL+SG N + + +++ S + L P+ F ++KAC G G +
Sbjct: 267 DVVSWNALISGCVLNGHDHRAIELLLQMKS-SGLVPNVFMLSSILKACAGAGAFDLGRQI 325
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K D ++ L+ MY K F+++ +K+F+ M R+L+ WN++I G S G
Sbjct: 326 HGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRH 385
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F + + +EG + T+ VL
Sbjct: 386 DEAFSIFYGLR--KEGLGVNRTTLAAVL 411
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC ++G+++H + + S+D+I L+ MY+ F D+ +VFD + R
Sbjct: 309 ILKACAGAGAFDLGRQIHGFMIKANADSDDYI-GVGLVDMYAKNHFLDDAMKVFDWMSHR 367
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WNAL+SG + + + SIF L + L + T V+K+ + V
Sbjct: 368 DLILWNALISGCSHGGRHDEAFSIFYGLRKEG-LGVNRTTLAAVLKSTASLEAASATRQV 426
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A K+G I D V N LI Y KC+ + + +++FE ++++ S+I S+
Sbjct: 427 HALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHG 486
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L ++M+ +G PD + ++L
Sbjct: 487 EGAIKLFMEML--RKGLEPDPFVLSSLL 512
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ LI+ YS C P +RRVFD + W++LV+ ++ N L + F + ++
Sbjct: 39 LRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEG 98
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+ + F P V+K + D G+ VH MA G DVFV+NAL+AMYG F+++
Sbjct: 99 -VCCNEFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDA 154
Query: 255 VKLF-EVMPERNLVSWNSIICGFSEN 279
++F E ERN VSWN ++ + +N
Sbjct: 155 RRVFDEAGSERNAVSWNGLMSAYVKN 180
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 98/194 (50%), Gaps = 4/194 (2%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
++VH L + ++N LI Y C D+ RVF+ + ++ ++++ ++
Sbjct: 424 RQVHALAEKIGFIFDAHVVNG-LIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQ 482
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF 236
+ + +F+E+ L+PD F ++ AC ++ G VH K + D F
Sbjct: 483 CDHGEGAIKLFMEMLRKG-LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAF 541
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCE 296
NAL+ Y KC +E+ F +PER +VSW+++I G +++G + +L +M+ +
Sbjct: 542 AGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMV--D 599
Query: 297 EGFIPDVITVVTVL 310
EG P+ IT+ +VL
Sbjct: 600 EGINPNHITMTSVL 613
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 12/177 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC E GK+VH + QF +D L+ Y+ CG D+ F SL R
Sbjct: 511 LLNACASLSAYEQGKQVHAHL-IKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPER 569
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVG--- 217
+ W+A++ G ++ L +F + D + P++ T V+ AC G+ D
Sbjct: 570 GVVSWSAMIGGLAQHGHGKRALELFGRM-VDEGINPNHITMTSVLCACNHAGLVDEAKRY 628
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
F S M G+ + +I + G+ +++ ++L MP + N W +++
Sbjct: 629 FNS----MKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALL 681
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 118/204 (57%), Gaps = 11/204 (5%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
DI+ K++H + ++ + +L+ Y++CG P +R +FD + +N+ +N ++
Sbjct: 1039 DIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMI 1098
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
+ N LY+D L +F ++ + PD++T+PCV+KA G D+ G +H ++GL
Sbjct: 1099 RSYVNNHLYSDALLVFKNMAGHG-IDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGL 1157
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
+VFV N LI+MYGKC + E ++ + MP R++VSWNS++ G + NG FD ++
Sbjct: 1158 DLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNG----QFDDALE 1213
Query: 292 MMGCEE----GFIPDVITVVTVLP 311
+ C+E G PD T+ ++LP
Sbjct: 1214 V--CKEMELLGLKPDAGTMASLLP 1235
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
+ +F L ++L WN +++ + N + + + IF+++ D + PD + V+ ACG
Sbjct: 1249 KEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQME-DHAVDPDAISIASVLPACGD 1307
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
++ + G +H + L ++ + NALI MY KC +E ++F+ M R++VSW S+
Sbjct: 1308 LSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSM 1367
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I + NG ++ L +M + G PD I V+VL
Sbjct: 1368 ISAYGMNGKGRDAVSLFSRMQ--DLGLNPDSIAFVSVL 1403
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 6/174 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG + +G+R+HE V + + ++ LI MY+ CG +R VFD +K R
Sbjct: 1301 VLPACGDLSALLLGRRIHEYV-VRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFR 1359
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
++ W +++S + N D +S+F + D L PD+ F V+ AC G+ D G
Sbjct: 1360 DVVSWTSMISAYGMNGKGRDAVSLFSRM-QDLGLNPDSIAFVSVLSACSHAGLLDEG-RY 1417
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
M + ++ + ++ + G+ V+E + MP E N W +++
Sbjct: 1418 YFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALL 1471
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 121/214 (56%), Gaps = 9/214 (4%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A +L AC +++ GK VH+ + + +N F+ N L MY+ CG D+ VF
Sbjct: 456 AVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNA-LTDMYAKCGSMKDAHDVFSH 514
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+K +++ WN ++ G+TKN L + L++F E+ ++ KPD T C++ AC +A +
Sbjct: 515 MKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES--KPDGTTVACILPACASLAALDK 572
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G +HG A + G D +V+NA++ MY KC + LF+++P ++LVSW +I G+
Sbjct: 573 GREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGM 632
Query: 279 NGFSCESFDLL--IKMMGCEEGFIPDVITVVTVL 310
+G+ E+ + ++M G E PD ++ +++L
Sbjct: 633 HGYGSEAINTFNQMRMTGIE----PDEVSFISIL 662
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 124/243 (51%), Gaps = 5/243 (2%)
Query: 68 QEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSAST 127
++I CE N L N DL A +LQ C K I G+RV ++ +S
Sbjct: 122 RKIVEFCEVGDLKNAMELLCSSQNSNFDLG-AYCSILQLCAERKSIRDGRRVRSIIESSG 180
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
D I+ +L+ MY CG + R VFD L +F WN ++S ++ + Y + +++F
Sbjct: 181 VMI-DGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLF 239
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
++ + +KP+++TF ++K +A V G VHG+ K+G V N+LI+ Y
Sbjct: 240 KQML-ELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFV 298
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
V KLF+ + +R+++SWNS+I G+ +NG ++ IKM+ G D+ T+V
Sbjct: 299 GRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVF--GVDIDLATMV 356
Query: 308 TVL 310
V
Sbjct: 357 NVF 359
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 5/218 (2%)
Query: 95 DLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSR 153
D+ AT V + AC + + +GK +H + + N L+ MYS CG +
Sbjct: 349 DIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAI 408
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
RVF+ + + + W ++++G+ + L + +F E+ S + PD + ++ AC
Sbjct: 409 RVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVV-PDVYAVTSILNACAIN 467
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
++ G VH + L + FVSNAL MY KC +++ +F M +++++SWN++I
Sbjct: 468 GNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMI 527
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G+++N E+ L +M + PD TV +LP
Sbjct: 528 GGYTKNSLPNEALTLFAEM---QRESKPDGTTVACILP 562
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 130/244 (53%), Gaps = 6/244 (2%)
Query: 69 EITTLCEESKSLNKALSLLQ--ENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSAS 126
++ LC K L +A+ LL + L A ++ L++ C ++ E G +V+ ++ S
Sbjct: 65 QLHGLCANGK-LEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYS-IALS 122
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
+ S + + M+ G +D+ VF + RNLF WN LV G+ K + + + +
Sbjct: 123 SMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCL 182
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
+ + +KPD +TFPCV++ CGGI D+ G VH + G D+ V NALI MY
Sbjct: 183 YHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYV 242
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
KC V+ LF+ MP R+++SWN++I G+ ENG E +L M G PD++T+
Sbjct: 243 KCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVD--PDLMTL 300
Query: 307 VTVL 310
+V+
Sbjct: 301 TSVI 304
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 3/200 (1%)
Query: 93 NADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDS 152
+ DL T V+ AC D +G+ +H V +T F+ D + L MY G ++
Sbjct: 294 DPDLMTLTSVI-SACELLGDRRLGRDIHAYV-ITTGFAVDISVCNSLTQMYLNAGSWREA 351
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
++F ++ +++ W ++SG+ N L + + + D+ +KPD T V+ AC
Sbjct: 352 EKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDS-VKPDEITVAAVLSACAT 410
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
+ D+ G +H +A K LI V V+N LI MY KC +++ + +F +P +N++SW SI
Sbjct: 411 LGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSI 470
Query: 273 ICGFSENGFSCESFDLLIKM 292
I G N E+ L +M
Sbjct: 471 IAGLRLNNRCFEALIFLRQM 490
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 12/214 (5%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
+L AC D++ G +H+L + S + N LI MYS C + +F ++
Sbjct: 401 VAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN-LINMYSKCKCIDKALDIFHNI 459
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+N+ W ++++G N + L IF+ T L+P+ T + AC I + G
Sbjct: 460 PRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMT-LQPNAITLTAALAACARIGALMCG 517
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H + G+ D F+ NAL+ MY +C + F ++++ SWN ++ G+SE
Sbjct: 518 KEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSER 576
Query: 280 G---FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E FD ++K PD IT +++L
Sbjct: 577 GQGSMVVELFDRMVK-----SRVRPDEITFISLL 605
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 129/244 (52%), Gaps = 6/244 (2%)
Query: 69 EITTLCEESKSLNKALSLLQ--ENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSAS 126
++ LC K L +A+ LL + L A ++ L++ C ++ E G +V+ V+ S
Sbjct: 65 QLHGLCANGK-LEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYS-VALS 122
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
+ S + + M+ G +D+ VF + RNLF WN LV G+ K + + + +
Sbjct: 123 SMNSLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICL 182
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
+ + +KPD +TFPCV++ CGGI D+ G VH + G D+ V NALI MY
Sbjct: 183 YHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYV 242
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
KC V+ LF+ MP R+++SWN++I G+ ENG E L M G PD++T+
Sbjct: 243 KCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVD--PDLMTL 300
Query: 307 VTVL 310
+V+
Sbjct: 301 TSVI 304
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ CG D+ G+ VH V + D + LITMY CG +R +FD + R
Sbjct: 202 VLRTCGGIPDLARGREVHVHV-VRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRR 260
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA++SG+ +N + + L +F + + PD T VI AC + D G +
Sbjct: 261 DIISWNAMISGYFENGMGHEGLKLFFAMRG-LSVDPDLMTLTSVISACELLGDRRLGRDI 319
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G D+ V N+L MY E KLF M +++VSW ++I G+ N
Sbjct: 320 HAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLP 379
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ D +MM ++ PD ITV VL
Sbjct: 380 EKAIDTY-RMMD-QDSVKPDEITVAAVL 405
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 3/200 (1%)
Query: 93 NADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDS 152
+ DL T V+ AC D +G+ +H V +T F+ D + L MY G ++
Sbjct: 294 DPDLMTLTSVI-SACELLGDRRLGRDIHAYV-ITTGFAVDISVCNSLTQMYLYAGSWREA 351
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
++F + +++ W ++SG+ N L + + + D+ +KPD T V+ AC
Sbjct: 352 EKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDS-VKPDEITVAAVLSACAT 410
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
+ D+ G +H +A K LI V V+N LI MY KC +++ + +F +P +N++SW SI
Sbjct: 411 LGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSI 470
Query: 273 ICGFSENGFSCESFDLLIKM 292
I G N E+ +M
Sbjct: 471 IAGLRLNNRCFEALIFFRQM 490
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 12/214 (5%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
+L AC D++ G +H+L + S + N LI MYS C + +F ++
Sbjct: 401 VAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN-LINMYSKCKCIDKALDIFHNI 459
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+N+ W ++++G N + L F ++ L+P+ T + AC I + G
Sbjct: 460 PRKNVISWTSIIAGLRLNNRCFEALIFFRQMK--MTLQPNAITLTAALAACARIGALMCG 517
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H + G+ D F+ NAL+ MY +C + F ++++ SWN ++ G+SE
Sbjct: 518 KEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNS-QKKDVSSWNILLTGYSER 576
Query: 280 G---FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E FD ++K PD IT +++L
Sbjct: 577 GQGSVVVELFDRMVKAR-----VRPDEITFISLL 605
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 113/200 (56%), Gaps = 5/200 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT-RNLFQWNAL 170
D ++G +VH + A T F +D + L+ MY GF D+RRVFD + RN WN L
Sbjct: 22 DAQLGAQVHAMAMA-TGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGL 80
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
+S + KN+ D + +F E+ + ++P F F CV+ AC G ++ G VH M +MG
Sbjct: 81 MSAYVKNDQCGDAIQVFGEMVW-SGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMG 139
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
DVF +NAL+ MY K V+ +FE MP+ ++VSWN++I G NG + +LL+
Sbjct: 140 YEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLL 199
Query: 291 KMMGCEEGFIPDVITVVTVL 310
+M G +P+V + ++L
Sbjct: 200 QMK--SSGLVPNVFMLSSIL 217
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC ++I+ G++VH +V + D L+ MY G + +F+ +
Sbjct: 115 VVNACTGSRNIDAGRQVHAMV-VRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDS 173
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNAL+SG N + + +++ S + L P+ F ++KAC G G +
Sbjct: 174 DVVSWNALISGCVLNGHDHRAIELLLQMKS-SGLVPNVFMLSSILKACAGAGAFDLGRQI 232
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K D ++ L+ MY K F+++ +K+F+ M R+L+ WN++I G S G
Sbjct: 233 HGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRH 292
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F + + +EG + T+ VL
Sbjct: 293 DEAFSIFYGLR--KEGLGVNRTTLAAVL 318
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC ++G+++H + + S+D+I L+ MY+ F D+ +VFD + R
Sbjct: 216 ILKACAGAGAFDLGRQIHGFMIKANADSDDYI-GVGLVDMYAKNHFLDDAMKVFDWMSHR 274
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WNAL+SG + + + SIF L + L + T V+K+ + V
Sbjct: 275 DLILWNALISGCSHGGRHDEAFSIFYGLRKEG-LGVNRTTLAAVLKSTASLEAASATRQV 333
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A K+G I D V N LI Y KC+ + + +++FE ++++ S+I S+
Sbjct: 334 HALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHG 393
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L ++M+ +G PD + ++L
Sbjct: 394 EGAIKLFMEML--RKGLEPDPFVLSSLL 419
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 98/194 (50%), Gaps = 4/194 (2%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
++VH L + ++N LI Y C D+ RVF+ + ++ ++++ ++
Sbjct: 331 RQVHALAEKIGFIFDAHVVNG-LIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQ 389
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF 236
+ + +F+E+ L+PD F ++ AC ++ G VH K + D F
Sbjct: 390 CDHGEGAIKLFMEMLRKG-LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAF 448
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCE 296
NAL+ Y KC +E+ F +PER +VSW+++I G +++G + +L +M+ +
Sbjct: 449 AGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMV--D 506
Query: 297 EGFIPDVITVVTVL 310
EG P+ IT+ +VL
Sbjct: 507 EGINPNHITMTSVL 520
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ F P V+K + D G+ VH MA G DVFV+NAL+AMYG F+++ ++F
Sbjct: 9 NEFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVF 65
Query: 259 -EVMPERNLVSWNSIICGFSEN 279
E ERN VSWN ++ + +N
Sbjct: 66 DEAGSERNAVSWNGLMSAYVKN 87
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 12/177 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC E GK+VH + QF +D L+ Y+ CG D+ F SL R
Sbjct: 418 LLNACASLSAYEQGKQVHAHL-IKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPER 476
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVG--- 217
+ W+A++ G ++ L +F + D + P++ T V+ AC G+ D
Sbjct: 477 GVVSWSAMIGGLAQHGHGKRALELFGRM-VDEGINPNHITMTSVLCACNHAGLVDEAKRY 535
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
F S M G+ + +I + G+ +++ ++L MP + N W +++
Sbjct: 536 FNS----MKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALL 588
>gi|449464272|ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
gi|449520209|ref|XP_004167126.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
Length = 840
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 141/264 (53%), Gaps = 9/264 (3%)
Query: 51 SLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLK---EATGVLLQAC 107
S S +N +L I++LC++ L +AL L+ + L D+ + G LLQ C
Sbjct: 31 SFSQIASNVQISYKSYLNHISSLCKQGHLL-EALDLVTD-LELEDITIGPDVYGELLQGC 88
Query: 108 GHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQ 166
+E+ + +G+++H ++ + + I T+L+ YS C + R+F L+ +N F
Sbjct: 89 VYERALSLGQQIHGRILKNGESIAKNEYIETKLVIFYSKCDESEIANRLFGKLQVQNEFS 148
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
W A++ ++ + L F E+ + L DNF P KA G + +GFG VH
Sbjct: 149 WAAIMGLKSRMGFNQEALMGFREMH-EYGLLLDNFVIPIAFKASGALRWIGFGKSVHAYV 207
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
KMGL G ++V+ +L+ MYGKC EE K+F+ + E+N+V+WNS+I F++NG + E+
Sbjct: 208 VKMGLGGCIYVATSLLDMYGKCGLCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLNAEAV 267
Query: 287 DLLIKMMGCEEGFIPDVITVVTVL 310
+ +M EG P +T+ + L
Sbjct: 268 ETFYEMR--VEGVAPTQVTLSSFL 289
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 106/208 (50%), Gaps = 6/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHEL-VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L A + I+ GK+ H L V + + +N I+ + LI YS G D+ VF + +
Sbjct: 289 LSASANLSVIDEGKQGHALAVLSGLELTN--ILGSSLINFYSKVGLVEDAELVFSEMLEK 346
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN LVSG+ N L L + + S+ L+ D+ T ++ A ++ G
Sbjct: 347 DTVTWNLLVSGYVHNGLVDRALDLCHVMQSEN-LRFDSVTLASIMAAAADSRNLKLGKEG 405
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + L DV V++++I MY KC +E ++F+ +R+L+ WN+++ ++E G S
Sbjct: 406 HSFCVRNNLESDVAVASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTLLAAYAEQGHS 465
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M EG P+VI+ +V+
Sbjct: 466 GETLKLFYQMQ--LEGLPPNVISWNSVI 491
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 4/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+ +A G + I GK VH V + T L+ MY CG ++++VFD +
Sbjct: 186 IAFKASGALRWIGFGKSVHAYV-VKMGLGGCIYVATSLLDMYGKCGLCEEAKKVFDKILE 244
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N+ WN+++ FT+N L + + F E+ + + P T + A ++ + G
Sbjct: 245 KNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEG-VAPTQVTLSSFLSASANLSVIDEGKQ 303
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
H +A GL + ++LI Y K VE+ +F M E++ V+WN ++ G+ NG
Sbjct: 304 GHALAVLSGLELTNILGSSLINFYSKVGLVEDAELVFSEMLEKDTVTWNLLVSGYVHNGL 363
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ DL M E D +T+ +++
Sbjct: 364 VDRALDLCHVMQ--SENLRFDSVTLASIM 390
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 75/148 (50%), Gaps = 3/148 (2%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL W L+ G +N L + F + + +KP++ + ++ AC +A + G +
Sbjct: 518 NLITWTTLICGLAQNGLGDEAFLTFQSME-EAGIKPNSLSISSLLSACSTMASLPHGRAI 576
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + L V +L+ MY KC + + ++F+++ ++ L +N++I G++ +G +
Sbjct: 577 HCYITRHELSVSTPVLCSLVNMYAKCGSINQAKRVFDMILKKELPVYNAMISGYALHGQA 636
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L ++ EE PD IT ++L
Sbjct: 637 VEALSLFRRLK--EECIKPDEITFTSIL 662
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC + G+ +H ++ + S + L+ MY+ CG ++RVFD + + L
Sbjct: 563 ACSTMASLPHGRAIHCYIT-RHELSVSTPVLCSLVNMYAKCGSINQAKRVFDMILKKELP 621
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+NA++SG+ + + LS+F L + +KPD TF ++ ACG
Sbjct: 622 VYNAMISGYALHGQAVEALSLFRRLKEEC-IKPDEITFTSILSACG 666
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 120/210 (57%), Gaps = 8/210 (3%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L ACG+ ++ GK VH V +T F + ++ + L+ MY CG +S+R+FD +
Sbjct: 326 GTVLTACGNLGRLKQGKEVHAKV-ITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMP 384
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+N W+AL+ G+ +N + V+ IF ++ K D + F +++ C G+A V G
Sbjct: 385 IKNSVSWSALLGGYCQNGDFKSVIQIFRKME-----KVDLYCFGTILRTCAGLAAVRQGK 439
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH + G DV V +AL+ +Y KC +E +F+ MP RNL++WNS+I GF++NG
Sbjct: 440 EVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNG 499
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + +M+ +EG PD I+ + +L
Sbjct: 500 RGEEALRIFNQMV--KEGIKPDYISFIGIL 527
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 101/178 (56%), Gaps = 1/178 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC D+++G+ H +V F ++++I + LI M+ D+R++FD L
Sbjct: 226 VIKACSELGDLKLGRIFHGVV-LGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEP 284
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W +++S T+N+ + + L F + D + PD FTF V+ ACG + + G V
Sbjct: 285 DAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEV 344
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H G G+V V ++L+ MYGKC V E ++F+ MP +N VSW++++ G+ +NG
Sbjct: 345 HAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNG 402
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCG--FPLDSRRVFDSLK 160
LLQ C G ++H V S + F+ N+ L+T+Y G FP ++R+VFD L
Sbjct: 124 LLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNS-LLTLYFKLGTDFP-ETRKVFDGLF 181
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+++ W +++SG+ + + L +F ++ + ++P+ FT VIKAC + D+ G
Sbjct: 182 VKDVISWTSMISGYVRVGKPMNSLELFWKMLA-YGVEPNAFTLSAVIKACSELGDLKLGR 240
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
HG+ G + +++ALI M+G+ +++ +LF+ + E + + W SII + N
Sbjct: 241 IFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRND 300
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F E+ M + G PD T TVL
Sbjct: 301 FFDEALRFFYSMQR-DHGMCPDGFTFGTVL 329
>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
Length = 1073
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 137/256 (53%), Gaps = 9/256 (3%)
Query: 55 KTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIE 114
++NN +G +++ E KS+ A+ LL + A+L LQ C K +
Sbjct: 63 ESNNTWDEGPKIVRDT----REGKSIKGAVQLLGKRGVQANLN-FYARRLQQCVLAKSLA 117
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
GK+VH+ + S QF D +N LI+MYS CG D+ VF +++ +++ WNA++SG+
Sbjct: 118 EGKKVHDHMR-SAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAMEDKDVVSWNAMISGY 176
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
+ + +F ++ + LKP+ TF ++ AC + FG +H AK G D
Sbjct: 177 ALHGRDQEAADLFYQMQREG-LKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYESD 235
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
V VS ALI MY KC +E K+F M ERN+VSW ++I G+ ++G S E+ L K++
Sbjct: 236 VNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLI- 294
Query: 295 CEEGFIPDVITVVTVL 310
G P+ ++ ++L
Sbjct: 295 -RSGIQPNKVSFASIL 309
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 117/208 (56%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL C D++ GK +H + AST + D + T LI+MY+ CG P ++R+VF+ + R
Sbjct: 408 LLAICADRADLDRGKELHSQI-ASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPER 466
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WNA +S +++L + F ++ D ++ PD+ TF ++ +C D+ G +
Sbjct: 467 NVISWNAFISCCCRHDLGKEAFQAFKQMRRD-DVNPDHITFITLLNSCTSPEDLERGRYI 525
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + G++ + V+NALI+MYG+C + + ++F + R+L SWN++I ++G +
Sbjct: 526 HGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGAN 585
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+FDL K EG D T + VL
Sbjct: 586 GSAFDLFRKYRS--EGGKGDKYTFINVL 611
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 111/208 (53%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + D+ G ++H + + + ++ LI+MYS CG ++R+VFD+L++
Sbjct: 308 ILGACTNPNDLGEGLKLHAYIKQAG-LEQEVLVGNALISMYSRCGSLANARQVFDNLRSL 366
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WNA+++G+ + L + +F + +PD FT+ ++ C AD+ G +
Sbjct: 367 NRTTWNAMIAGYGEG-LMEEAFRLFRAMEQKG-FQPDKFTYASLLAICADRADLDRGKEL 424
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A G D+ V+ ALI+MY KC EE K+F MPERN++SWN+ I +
Sbjct: 425 HSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLG 484
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F +M + PD IT +T+L
Sbjct: 485 KEAFQAFKQMR--RDDVNPDHITFITLL 510
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 116/209 (55%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E G+++H + A + +D ++T LI MY CG +R+VF+ ++ R
Sbjct: 207 ILSACQSPIALEFGEQIHSRI-AKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRER 265
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A++SG+ ++ + L++F +L + ++P+ +F ++ AC D+G G +
Sbjct: 266 NVVSWTAMISGYVQHGDSREALALFRKLIR-SGIQPNKVSFASILGACTNPNDLGEGLKL 324
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + GL +V V NALI+MY +C + ++F+ + N +WN++I G+ E G
Sbjct: 325 HAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE-GLM 383
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+F L M ++GF PD T ++L
Sbjct: 384 EEAFRLFRAME--QKGFQPDKFTYASLLA 410
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 115/211 (54%), Gaps = 10/211 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+A + +D++ G+ +H LV F D + T LI MYS CG D+ VF +++ +
Sbjct: 610 VLRAVANLEDLDAGRMIHGLVEKGG-FGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEK 668
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA+++ + ++ D L +F ++ + + PD+ T+ + AC + V G +
Sbjct: 669 DVVCWNAMLAAYAHSDRGQDALKLFQQMQLEG-VNPDSSTYSTALNACARLTAVEHGKKI 727
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG-- 280
H + G+ D VSN+LI MY +C + ++FE M R++ SWN++I G+ +NG
Sbjct: 728 HAQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNALIAGYCQNGQG 787
Query: 281 -FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E ++L+++ +P+ T ++L
Sbjct: 788 NIALEYYELMLRA-----SIVPNKATFTSIL 813
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 4/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL +C +D+E G+ +H ++ SN+ + N LI+MY CG D+R VF ++
Sbjct: 508 TLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANA-LISMYGRCGNLADAREVFYRIRR 566
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R+L WNA+++ ++ +F + S+ K D +TF V++A + D+ G
Sbjct: 567 RDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGG-KGDKYTFINVLRAVANLEDLDAGRM 625
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG+ K G D+ V LI MY KC + + +F + E+++V WN+++ ++ +
Sbjct: 626 IHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHSDR 685
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M EG PD T T L
Sbjct: 686 GQDALKLFQQMQ--LEGVNPDSSTYSTAL 712
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 113/200 (56%), Gaps = 5/200 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT-RNLFQWNAL 170
D +G +VH + A T F +D + L+ MY GF D+RRVF+ + RN WN L
Sbjct: 115 DARLGAQVHAMAMA-TGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGL 173
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
+S + KN+ D + +F E+ + ++P F F CV+ AC G ++ G VH M +MG
Sbjct: 174 MSAYVKNDQCGDAIQVFGEMVW-SGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMG 232
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
DVF +NAL+ MY K V+ +FE MP+ ++VSWN++I G NG + +LL+
Sbjct: 233 YDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLL 292
Query: 291 KMMGCEEGFIPDVITVVTVL 310
+M G +P+V T+ ++L
Sbjct: 293 QMK--YSGLVPNVFTLSSIL 310
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 16/244 (6%)
Query: 74 CEESKSLNKALSLLQENLHNADLKEATGV-------LLQACGHEKDIEIGKRVHELVSAS 126
C ++ALSL E KE GV +L++ + ++VH L +
Sbjct: 379 CSHGGRHDEALSLFYELR-----KEGLGVNRTTLAAVLKSTASLEAASTTRQVHAL-AVK 432
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
F D + LI Y C D+ RVF+ + ++ ++++ ++ + + +
Sbjct: 433 IGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKL 492
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
F+E+ L+PD F ++ AC ++ G VH K + D F NAL+ Y
Sbjct: 493 FMEMLRKG-LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYA 551
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
KC +E+ F +PER +VSW+++I G +++G + +L +M+ +EG P+ IT+
Sbjct: 552 KCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMV--DEGINPNHITM 609
Query: 307 VTVL 310
+VL
Sbjct: 610 TSVL 613
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC ++IE G++VH +V + D L+ MY G + +F+ +
Sbjct: 208 VVNACTGSRNIEAGRQVHAMV-VRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDS 266
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNAL+SG N + + +++ + L P+ FT ++KAC G G +
Sbjct: 267 DVVSWNALISGCVLNGHDHRAIELLLQMKY-SGLVPNVFTLSSILKACSGAGAFDLGRQI 325
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K D ++ L+ MY K F+++ K+F+ M R+L+ N++I G S G
Sbjct: 326 HGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRH 385
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L ++ +EG + T+ VL
Sbjct: 386 DEALSLFYELR--KEGLGVNRTTLAAVL 411
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 77/144 (53%), Gaps = 5/144 (3%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
LI+ YS C P +RR FD + W++LV+ ++ N L + F + ++ +
Sbjct: 41 NHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEG-V 99
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
+ F P V+K + D G+ VH MA G DVFV+NAL+AMYG F+++ +
Sbjct: 100 CCNEFALPVVLKC---VPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARR 156
Query: 257 LF-EVMPERNLVSWNSIICGFSEN 279
+F E ERN VSWN ++ + +N
Sbjct: 157 VFNEADSERNAVSWNGLMSAYVKN 180
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 118/204 (57%), Gaps = 11/204 (5%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
DI+ K++H + ++ + +L+ Y++CG P +R +FD + +N+ +N ++
Sbjct: 50 DIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMI 109
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
+ N LY+D L +F ++ + PD++T+PCV+KA G D+ G +H ++GL
Sbjct: 110 RSYVNNHLYSDALLVFKNMAGHG-IDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGL 168
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
+VFV N LI+MYGKC + E ++ + MP R++VSWNS++ G + NG FD ++
Sbjct: 169 DLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNG----QFDDALE 224
Query: 292 MMGCEE----GFIPDVITVVTVLP 311
+ C+E G PD T+ ++LP
Sbjct: 225 V--CKEMELLGLKPDAGTMASLLP 246
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
+ +F L ++L WN +++ + N + + + IF+++ D + PD + V+ ACG
Sbjct: 260 KEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQME-DHAVDPDAISIASVLPACGD 318
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
++ + G +H + L ++ + NALI MY KC +E ++F+ M R++VSW S+
Sbjct: 319 LSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSM 378
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I + NG ++ L +M + G PD I V+VL
Sbjct: 379 ISAYGMNGKGRDAVSLFSRMQ--DLGLNPDSIAFVSVL 414
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 6/174 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG + +G+R+HE V + + ++ LI MY+ CG +R VFD +K R
Sbjct: 312 VLPACGDLSALLLGRRIHEYV-VRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFR 370
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
++ W +++S + N D +S+F + D L PD+ F V+ AC G+ D G
Sbjct: 371 DVVSWTSMISAYGMNGKGRDAVSLFSRM-QDLGLNPDSIAFVSVLSACSHAGLLDEG-RY 428
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
M + ++ + ++ + G+ V+E + MP E N W +++
Sbjct: 429 YFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALL 482
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 113/200 (56%), Gaps = 5/200 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT-RNLFQWNAL 170
D +G +VH + A T F +D + L+ MY GF D+RRVF+ + RN WN L
Sbjct: 115 DARLGAQVHAMAMA-TGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGL 173
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
+S + KN+ D + +F E+ + ++P F F CV+ AC G ++ G VH M +MG
Sbjct: 174 MSAYVKNDQCGDAIQVFGEMVW-SGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMG 232
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
DVF +NAL+ MY K V+ +FE MP+ ++VSWN++I G NG + +LL+
Sbjct: 233 YDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLL 292
Query: 291 KMMGCEEGFIPDVITVVTVL 310
+M G +P+V T+ ++L
Sbjct: 293 QMK--YSGLVPNVFTLSSIL 310
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 16/244 (6%)
Query: 74 CEESKSLNKALSLLQENLHNADLKEATGV-------LLQACGHEKDIEIGKRVHELVSAS 126
C ++ALSL E KE GV +L++ + ++VH L +
Sbjct: 379 CSHGGRHDEALSLFYELR-----KEGLGVNRTTLAAVLKSTASLEAASTTRQVHAL-AVK 432
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
F D + LI Y C D+ RVF+ + ++ ++++ ++ + + +
Sbjct: 433 IGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKL 492
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
F+E+ L+PD F ++ AC ++ G VH K + D F NAL+ Y
Sbjct: 493 FMEMLRKG-LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYA 551
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
KC +E+ F +PER +VSW+++I G +++G + +L +M+ +EG P+ IT+
Sbjct: 552 KCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMV--DEGINPNHITM 609
Query: 307 VTVL 310
+VL
Sbjct: 610 TSVL 613
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC ++IE G++VH +V + D L+ MY G + +F+ +
Sbjct: 208 VVNACTGSRNIEAGRQVHAMV-VRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDS 266
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNAL+SG N + + +++ + L P+ FT ++KAC G G +
Sbjct: 267 DVVSWNALISGCVLNGHDHRAIELLLQMKY-SGLVPNVFTLSSILKACSGAGAFDLGRQI 325
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K D ++ L+ MY K F+++ K+F+ M R+L+ N++I G S G
Sbjct: 326 HGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRH 385
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L ++ +EG + T+ VL
Sbjct: 386 DEALSLFYELR--KEGLGVNRTTLAAVL 411
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
LI+ YS C P +RRVFD + W++LV+ ++ N L + F + ++ +
Sbjct: 41 NHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEG-V 99
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
+ F P V+K + D G+ VH MA G DVFV+NAL+AMYG F+++ +
Sbjct: 100 CCNEFALPVVLKC---VPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARR 156
Query: 257 LF-EVMPERNLVSWNSIICGFSEN 279
+F E ERN VSWN ++ + +N
Sbjct: 157 VFNEADSERNAVSWNGLMSAYVKN 180
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 114/207 (55%), Gaps = 2/207 (0%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+A G + +GK+VH L + Q S D + MYS G ++R++FD + RN
Sbjct: 115 FKASGSLRSPLVGKQVHALAVKAGQIS-DVFVGCSAFDMYSKAGLTEEARKMFDEMPERN 173
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WNA +S Y D L+ F+E + ++P +F V+ AC G++ + G VH
Sbjct: 174 IATWNAYLSNSVLEGRYDDALTAFIEARKEG-IEPTDFMVSSVLSACAGLSVLEVGKSVH 232
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+A K ++G++FV +AL+ MYGKC +E+ + F+ MPERNLV+WN++I G++ G +
Sbjct: 233 TLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQAD 292
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L +M P+ +T V VL
Sbjct: 293 MAVTLFDEMTCGSHRVAPNYVTFVCVL 319
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 90/178 (50%), Gaps = 4/178 (2%)
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
FI N L+ MYS P ++ + R++ W AL++G +N +T L F +
Sbjct: 43 FIYN-HLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRR 101
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
D+ ++P++FTFPC KA G + G VH +A K G I DVFV + MY K E
Sbjct: 102 DS-IQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTE 160
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E K+F+ MPERN+ +WN+ + G ++ I+ +EG P V +VL
Sbjct: 161 EARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEAR--KEGIEPTDFMVSSVL 216
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 4/174 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E+GK VH L + N F + + L+ MY CG D+ R FD + R
Sbjct: 215 VLSACAGLSVLEVGKSVHTLAVKACVVGNIF-VGSALVDMYGKCGSIEDAERAFDEMPER 273
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDT-ELKPDNFTFPCVIKACGGIADVGFGSG 221
NL WNA++ G+ +++F E++ + + P+ TF CV+ AC V G
Sbjct: 274 NLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGME 333
Query: 222 V-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS-WNSII 273
+ M + G+ ++ + G+ VE+ + + MP R VS W +++
Sbjct: 334 IFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALL 387
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 122/238 (51%), Gaps = 35/238 (14%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL C K + + VH + TQFS++ I RL+ +Y CGF D+R+VFD ++ R
Sbjct: 25 LLDTCVKSKSVFEARLVHARI-IKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQR 83
Query: 163 NLFQWNA-------------------------------LVSGFTKNELYTDVLSIFVELS 191
N F WNA +VSGF + + + + L V++
Sbjct: 84 NTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMH 143
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
S+ + + ++F + AC G+ D+ G +HG+ AK DV++ +AL+ MY KC V
Sbjct: 144 SE-DFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVV 202
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
+ F+ M RN+VSWNS+I + +NG + ++ ++ ++MM C G PD IT+ +V
Sbjct: 203 ASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNC--GIEPDEITLASV 258
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 121/242 (50%), Gaps = 40/242 (16%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD-------- 157
AC I G ++H V ++ ND ++ L+ MY+ C ++R VFD
Sbjct: 261 ACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVV 320
Query: 158 -----------------------SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
++ RN+ WNAL++G+T+N + + +F+ L ++
Sbjct: 321 SETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRES 380
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVH------GMAAKMGLIGDVFVSNALIAMYGKC 248
+ P ++TF ++ AC +AD+ G H G K G D+FV N+LI MY KC
Sbjct: 381 -IWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKC 439
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
VE+ +FE M ER+ VSWN++I G+++NG+ E+ ++ +M+ G PD +T++
Sbjct: 440 GLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREML--VSGERPDHVTMIG 497
Query: 309 VL 310
VL
Sbjct: 498 VL 499
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 114/236 (48%), Gaps = 37/236 (15%)
Query: 90 NLHNAD--LKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC 146
++H+ D L E + G L AC D+ IG ++H L+ A +++S D + + L+ MYS C
Sbjct: 141 DMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLI-AKSRYSLDVYMGSALVDMYSKC 199
Query: 147 GFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCV 206
++R FD + RN+ WN+L++ + +N L +FV + + ++PD T V
Sbjct: 200 RVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMM-NCGIEPDEITLASV 258
Query: 207 IKACGGIADVGFGSGVHGMAAKMG-LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP--- 262
AC ++ + G +H K D+ + NAL+ MY KC V E +F+ MP
Sbjct: 259 ASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRD 318
Query: 263 ----------------------------ERNLVSWNSIICGFSENGFSCESFDLLI 290
ERN+VSWN++I G+++NG + E+ L +
Sbjct: 319 VVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFL 374
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 8/187 (4%)
Query: 101 GVLLQACGHEKDIEIGKRVH-ELVSASTQF----SNDFIINTRLITMYSLCGFPLDSRRV 155
G LL AC + D+++G++ H ++ F +D + LI MY CG D R V
Sbjct: 389 GNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLV 448
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
F+ + R+ WNA++ G+ +N T+ L IF E+ E +PD+ T V+ AC
Sbjct: 449 FERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGE-RPDHVTMIGVLSACSHAGL 507
Query: 216 VGFGS-GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
V G M + GL+ ++ + G+ ++E L + MP E + V W S++
Sbjct: 508 VEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLL 567
Query: 274 CGFSENG 280
+G
Sbjct: 568 AACKVHG 574
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D+ F ++ C V VH K ++F+ N L+ +YGKC F+E+ K+F
Sbjct: 18 DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLL 289
+ M +RN SWN+++ ++ G E+ +L
Sbjct: 78 DHMQQRNTFSWNAVLGALTKFGALDEALNLF 108
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 120/210 (57%), Gaps = 8/210 (3%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L ACG+ ++ GK VH V +T F + ++ + L+ MY CG +S+R+FD +
Sbjct: 267 GTVLTACGNLGRLKQGKEVHAKV-ITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMP 325
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+N W+AL+ G+ +N + V+ IF ++ K D + F +++ C G+A V G
Sbjct: 326 IKNSVSWSALLGGYCQNGDFKSVIQIFRKME-----KVDLYCFGTILRTCAGLAAVRQGK 380
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH + G DV V +AL+ +Y KC +E +F+ MP RNL++WNS+I GF++NG
Sbjct: 381 EVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNG 440
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + +M+ +EG PD I+ + +L
Sbjct: 441 RGEEALRIFNQMV--KEGIKPDYISFIGIL 468
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 101/178 (56%), Gaps = 1/178 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC D+++G+ H +V F ++++I + LI M+ D+R++FD L
Sbjct: 167 VIKACSELGDLKLGRIFHGVV-LGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEP 225
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W +++S T+N+ + + L F + D + PD FTF V+ ACG + + G V
Sbjct: 226 DAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEV 285
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H G G+V V ++L+ MYGKC V E ++F+ MP +N VSW++++ G+ +NG
Sbjct: 286 HAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNG 343
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 140/286 (48%), Gaps = 29/286 (10%)
Query: 37 KHSLRSIFKEKSSL----SLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLH 92
+H ++ +FK SL +LS TN S +I LC+ S L+ AL LL+
Sbjct: 2 QHLMKPLFKRYYSLLTPLNLSDNTNPFS--------KILQLCK-SGELSGALQLLK---- 48
Query: 93 NADLKEATG------VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC 146
+ D E + LLQ C G ++H V S + F+ N+ L+T+Y
Sbjct: 49 SIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNS-LLTLYFKL 107
Query: 147 G--FPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFP 204
G FP ++R+VFD L +++ W +++SG+ + + L +F ++ + ++P+ FT
Sbjct: 108 GTDFP-ETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLA-YGVEPNAFTLS 165
Query: 205 CVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
VIKAC + D+ G HG+ G + +++ALI M+G+ +++ +LF+ + E
Sbjct: 166 AVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEP 225
Query: 265 NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + W SII + N F E+ M + G PD T TVL
Sbjct: 226 DAICWTSIISALTRNDFFDEALRFFYSMQR-DHGMCPDGFTFGTVL 270
>gi|357117625|ref|XP_003560564.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g16470-like [Brachypodium distachyon]
Length = 435
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 135/244 (55%), Gaps = 7/244 (2%)
Query: 68 QEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSAST 127
+ + +LC + L++A+SLL +LLQ C + +D +GKR+H + ST
Sbjct: 8 RTLRSLCIRGE-LSQAVSLLHRRT-VCPFSRTYALLLQECVNRRDARVGKRIHARM-IST 64
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
F+ + + T+L+ Y+ G +R +FD + R + WNAL+SG T+ L + L +F
Sbjct: 65 GFNCNDYMATKLLIFYAKIGELGVARNLFDGMPRRGVVAWNALISGCTRGGLESQALEMF 124
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG-DVFVSNALIAMYG 246
+ ++ L+PD FTF V+ AC +A + G VHG+ K ++G +VF ++AL+ MY
Sbjct: 125 GSMRAEG-LRPDQFTFSSVLCACARLAALQHGWRVHGVMVKSDVVGGNVFANSALVDMYL 183
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
KC+ E+ + F PERN+ W ++I G ++G E+ L +M +GF P+ +T
Sbjct: 184 KCSSTEDARRAFAAAPERNVTMWTAVISGHGQHGHVGEALALFDQMT--RDGFRPNDVTF 241
Query: 307 VTVL 310
+ VL
Sbjct: 242 LAVL 245
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 6/182 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC ++ G RVH ++ S + N+ L+ MY C D+RR F + R
Sbjct: 142 VLCACARLAALQHGWRVHGVMVKSDVVGGNVFANSALVDMYLKCSSTEDARRAFAAAPER 201
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
N+ W A++SG ++ + L++F +++ D +P++ TF V+ AC GG+ D G
Sbjct: 202 NVTMWTAVISGHGQHGHVGEALALFDQMTRDG-FRPNDVTFLAVLSACAHGGLVDEGL-R 259
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP--ERNLVSWNSIICGFSE 278
M GL A++ M + + + +L + +P + + V W +++ +
Sbjct: 260 HFSSMPLDYGLTPKSEHYAAVVDMLARVGRLHDAYELVKNLPDCQEHSVVWGALLGACRK 319
Query: 279 NG 280
+G
Sbjct: 320 HG 321
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 115/189 (60%), Gaps = 2/189 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
LQAC I+IG+ +H ++ S F++ ++ N LI MY+ CG D+ RVF S+ ++
Sbjct: 258 LQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNA-LIAMYANCGQMEDAERVFKSMLFKD 316
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WN L+SG +N++Y+D ++ F ++ D+ KPD + +I A G A++ G VH
Sbjct: 317 CVSWNTLLSGMVQNDMYSDAINHFQDMQ-DSGQKPDQVSVLNMIAASGRSANLLAGMEVH 375
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
A K G+ ++ + N+LI MYGKC V+ M FE MPE++L+SW +II G+++N
Sbjct: 376 AYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHL 435
Query: 284 ESFDLLIKM 292
++ +LL K+
Sbjct: 436 DALNLLRKV 444
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 112/217 (51%), Gaps = 5/217 (2%)
Query: 96 LKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV 155
L++A L+ C K + G+++H + + + ++T+ + MY CG D+ +V
Sbjct: 45 LQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKV 104
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
FD + R +F WNA++ Y + + ++ E+ + D FTFPCV+KACG +
Sbjct: 105 FDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRV-LGVSLDAFTFPCVLKACGAFKE 163
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE--VMPERNLVSWNSII 273
G +HG+A K G G VFV NALIAMY KC + LF+ +M + + VSWNSII
Sbjct: 164 RRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSII 223
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G S E+ L +M E G + T V+ L
Sbjct: 224 SAHVGEGESLEALSLFRRMQ--EVGVESNTYTFVSAL 258
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 110/210 (52%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS--LK 160
+L+ACG K+ +G +H V+ + + LI MY+ CG +R +FDS ++
Sbjct: 154 VLKACGAFKERRLGCEIHG-VAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLME 212
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ WN+++S + LS+F + + ++ + +TF ++AC G + G
Sbjct: 213 KDDPVSWNSIISAHVGEGESLEALSLFRRMQ-EVGVESNTYTFVSALQACEGPTFIKIGR 271
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
G+H + K DV+VSNALIAMY C +E+ ++F+ M ++ VSWN+++ G +N
Sbjct: 272 GIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQND 331
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ + M + G PD ++V+ ++
Sbjct: 332 MYSDAINHFQDMQ--DSGQKPDQVSVLNMI 359
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 114/230 (49%), Gaps = 7/230 (3%)
Query: 83 ALSLLQE-NLHNADLKEA-TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLI 140
AL+LL++ L D+ G +L AC K ++ K +H V D +I ++
Sbjct: 437 ALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL--ADILIQNAIV 494
Query: 141 TMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDN 200
+Y +R VF+S+ ++++ W ++++ N L + L +F L +T ++PD
Sbjct: 495 NVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLI-ETNIEPDL 553
Query: 201 FTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV 260
T V+ A ++ + G +HG + G + ++N+L+ MY +C +E +F
Sbjct: 554 ITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNY 613
Query: 261 MPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +R+L+ W S+I +G ++ DL KM +E +PD IT + +L
Sbjct: 614 VKQRDLILWTSMINANGMHGCGKDAIDLFSKMT--DENVLPDHITFLALL 661
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 85 SLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYS 144
SL++ N+ DL VL A ++ GK +H + F I N+ L+ MY+
Sbjct: 543 SLIETNI-EPDLITLVSVLYAAAA-LSSLKKGKEIHGFLIRKGFFLEGLIANS-LVDMYA 599
Query: 145 LCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFP 204
CG ++R +F+ +K R+L W ++++ + D + +F +++ D + PD+ TF
Sbjct: 600 RCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMT-DENVLPDHITFL 658
Query: 205 CVIKAC 210
++ AC
Sbjct: 659 ALLYAC 664
>gi|255554336|ref|XP_002518208.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542804|gb|EEF44341.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 506
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 119/188 (63%), Gaps = 6/188 (3%)
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
S FS + I T+LI+ Y++CG P S+ VF+SL+ +++ WN+L+SG+ KN+ T+ S
Sbjct: 55 SMDFSQNPFIATKLISAYAICGVPTASKLVFNSLEVKSVPLWNSLISGYVKNQENTESFS 114
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
+F ++ S L PD++T + K CG I + G +HG++ K+G + D V+N+L++MY
Sbjct: 115 LFCQMCSFGVL-PDDYTLATLSKVCGEIGHLIAGKIIHGLSLKIGFVLDTVVANSLMSMY 173
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG---FSCESFDLLIKMMGCEEGFIPD 302
KC E +KLF+ MPER++ SWN +I G+S++G + + DL+ M +GF P+
Sbjct: 174 CKCGEFSEALKLFDEMPERSVGSWNVVIAGYSDSGDRNLNQQIVDLVKDMQ--IDGFKPN 231
Query: 303 VITVVTVL 310
TV ++L
Sbjct: 232 AFTVSSLL 239
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 8/214 (3%)
Query: 103 LLQAC-GHEKDIEIGKRVHELVSASTQ----FSNDFIINTRLITMYSLCGFPLDSRRVFD 157
LL C G + ++ G+ +H + + +D + + LI MYS ++FD
Sbjct: 238 LLVLCDGDIEKLDYGRELHGFIVRNELDLGCLGSDVHLGSCLIDMYSRINRVEKCMQLFD 297
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
+K RN++ W A+++G+ +N + L++F E+ + ++P+ T V+ C +A +
Sbjct: 298 QMKRRNVYVWTAMINGYVQNGALEEALTLFHEMQAKDGVEPNRVTLVSVLPICSSLAGLP 357
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGF 276
G +HG A + L D +SNALI MY KC + ++F+ R+ +SW+SII G+
Sbjct: 358 GGKQIHGYAIRKRLNFDASLSNALIDMYSKCGSLNYARRVFDNGTFRRDAISWSSIISGY 417
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+G E+ L KM+ + G PD ITV+ V+
Sbjct: 418 GLHGKGEEAVFLYDKML--QLGNKPDQITVIGVI 449
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 117/218 (53%), Gaps = 12/218 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L + CG + GK +H L S F D ++ L++MY CG ++ ++FD + R
Sbjct: 134 LSKVCGEIGHLIAGKIIHGL-SLKIGFVLDTVVANSLMSMYCKCGEFSEALKLFDEMPER 192
Query: 163 NLFQWNALVSGFTKN---ELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC-GGIADVGF 218
++ WN +++G++ + L ++ + ++ D KP+ FT ++ C G I + +
Sbjct: 193 SVGSWNVVIAGYSDSGDRNLNQQIVDLVKDMQIDG-FKPNAFTVSSLLVLCDGDIEKLDY 251
Query: 219 GSGVHGMAAK----MGLIG-DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
G +HG + +G +G DV + + LI MY + VE+ ++LF+ M RN+ W ++I
Sbjct: 252 GRELHGFIVRNELDLGCLGSDVHLGSCLIDMYSRINRVEKCMQLFDQMKRRNVYVWTAMI 311
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G+ +NG E+ L +M ++G P+ +T+V+VLP
Sbjct: 312 NGYVQNGALEEALTLFHEMQA-KDGVEPNRVTLVSVLP 348
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGV----LLQACGHEKDIEIGKRVHELVSASTQFSN 131
++ +L +AL+L E + D E V +L C + GK++H + + +
Sbjct: 316 QNGALEEALTLFHE-MQAKDGVEPNRVTLVSVLPICSSLAGLPGGKQIHGY-AIRKRLNF 373
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLK-TRNLFQWNALVSGFT---KNELYTDVLSIF 187
D ++ LI MYS CG +RRVFD+ R+ W++++SG+ K E +
Sbjct: 374 DASLSNALIDMYSKCGSLNYARRVFDNGTFRRDAISWSSIISGYGLHGKGEEAVFLYDKM 433
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK 228
++L + KPD T VI ACG V G ++ A K
Sbjct: 434 LQLGN----KPDQITVIGVISACGRSGLVYEGLRIYNSAIK 470
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H M + F++ LI+ Y C +F + +++ WNS+I G+ +N +
Sbjct: 50 HAQIFSMDFSQNPFIATKLISAYAICGVPTASKLVFNSLEVKSVPLWNSLISGYVKNQEN 109
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTV 309
ESF L +M C G +PD T+ T+
Sbjct: 110 TESFSLFCQM--CSFGVLPDDYTLATL 134
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 121/209 (57%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC K +++GK VHE V+ D + + LI +Y+ G D++ +FD++ +
Sbjct: 64 VVKACCGLKSVKMGKIVHETVNL-MGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQK 122
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN +++G+ KN + + IF+E+ +E+KP++ TF CV+ C A + G+ +
Sbjct: 123 DSVLWNVMLNGYVKNGDSGNAIKIFLEMRH-SEIKPNSVTFACVLSVCASEAMLDLGTQL 181
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+A GL D V+N L+AMY KC ++ KLF+ +P+ +LVSWN II G+ +NG
Sbjct: 182 HGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLM 241
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ L M+ G PD IT + LP
Sbjct: 242 GEAEHLFRGMI--SAGIKPDSITFASFLP 268
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 89/169 (52%), Gaps = 3/169 (1%)
Query: 142 MYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF 201
MY G D++ +F +L+ WN ++ GFT + L ++++ + PD +
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLG-AGVSPDKY 59
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
TFP V+KAC G+ V G VH MGL DVFV ++LI +Y + + + LF+ +
Sbjct: 60 TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
P+++ V WN ++ G+ +NG S + + ++M E P+ +T VL
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSE--IKPNSVTFACVL 166
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+ +GK +H + T+ + + ++ MY+ CG + RVF+ + ++ WN++++
Sbjct: 377 LNLGKELHGSI-IKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMIT 435
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
++N + +++F ++ + + D + + AC + + +G +HG+ K L
Sbjct: 436 SCSQNGRPGEAINLFRQMGMEGT-RYDCVSISGALSACANLPALHYGKEIHGLMIKGPLR 494
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
D++ ++LI MY KC + ++F+ M E+N VSWNSII + +G E L +M
Sbjct: 495 SDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEM 554
Query: 293 MGCEEGFIPDVITVVTVL 310
+ G PD +T + ++
Sbjct: 555 L--RNGIQPDHVTFLGII 570
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C E +++G ++H + + + NT L+ MYS C +R++FD+L
Sbjct: 165 VLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANT-LLAMYSKCQCLQAARKLFDTLPQS 223
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN ++SG+ +N L + +F + S +KPD+ TF + + + +
Sbjct: 224 DLVSWNGIISGYVQNGLMGEAEHLFRGMIS-AGIKPDSITFASFLPCVNELLSLKHCKEI 282
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLV---SWNSIIC----- 274
HG + ++ DVF+ +ALI +Y KC VE M ++NL S+++++C
Sbjct: 283 HGYIIRHAVVLDVFLKSALIDIYFKCRDVE--------MAQKNLCQSSSFDTVVCTTMIS 334
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G+ NG + E+ + ++ +E P +T ++ P
Sbjct: 335 GYVLNGKNKEALEAFRWLV--QERMKPTSVTFSSIFP 369
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + + GK +H L+ +D + LI MY+ CG SRRVFD ++ +N
Sbjct: 469 LSACANLPALHYGKEIHGLM-IKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKN 527
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG-SGV 222
WN+++S + + + L++F E+ + ++PD+ TF +I ACG V G
Sbjct: 528 EVSWNSIISAYGNHGDLKECLALFHEMLRNG-IQPDHVTFLGIISACGHAGQVDEGIRYY 586
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
H M + G+ + + M+G+ + E + MP
Sbjct: 587 HLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMP 626
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Query: 170 LVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM 229
++SG+ N + L F L + +KP + TF + A G+A + G +HG K
Sbjct: 332 MISGYVLNGKNKEALEAFRWLVQE-RMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKT 390
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL 289
L V +A++ MY KC ++ ++F + E++ + WNS+I S+NG E+ +L
Sbjct: 391 KLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLF 450
Query: 290 IKMMGCE 296
+ MG E
Sbjct: 451 -RQMGME 456
>gi|302756099|ref|XP_002961473.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
gi|300170132|gb|EFJ36733.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
Length = 643
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 110/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C +D+ K+ + A F D + L+ Y CG D+R VFD ++ R
Sbjct: 18 ILRDCASARDLTAAKQAQWEI-ARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFDRIQRR 76
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+F W ++ + N + L +F E+ S + DN T +KAC D+ G G+
Sbjct: 77 NIFSWTIMLGAYADNGHGREALGLFREIQSRG-MAIDNVTLVSALKACAVAGDLEEGRGI 135
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A +G ++ V+ AL++MYGKC +EE +F + ERN VSWN+++ +++NG
Sbjct: 136 HASARSLGYESEIIVATALVSMYGKCGHLEEAKAVFATLVERNRVSWNAMLAAYAQNGH- 194
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
CE L ++M C EG PD T V+VL
Sbjct: 195 CEEAVRLYRLM-CFEGIKPDATTFVSVL 221
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 110/209 (52%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC +E G+++H V AS + + LI MYS CG + ++ VFDS+ +
Sbjct: 322 LLVACAATGFLEAGRKIHAEV-ASLGLLSTLSVGGALINMYSECGNLVLAKSVFDSVPHK 380
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL WN L+ + + + L + ++ + LKPD FTF V+ AC + G +
Sbjct: 381 NLVSWNVLIGSYAGDGDGKEALGVHQKMELEG-LKPDKFTFISVLHACSASEALAEGKAI 439
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF-EVMPERNLVSWNSIICGFSENGF 281
H + A GL D + ALI +YGKC +E+ +F ++ RNLV+WNS++ G
Sbjct: 440 HALIAASGLERDEAIGTALINLYGKCGSLEQARNVFLDMKSRRNLVTWNSMLAAACTKG- 498
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E +I MMG EG +PD +T ++VL
Sbjct: 499 GLEDCVEIIHMMGL-EGIMPDELTFLSVL 526
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 107/205 (52%), Gaps = 5/205 (2%)
Query: 108 GHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQW 167
G + + E G R+H+ V S SN + N L++MY G D+R VFD + + + W
Sbjct: 223 GWKGEGEHGTRIHDQVLESGFGSNTTLANA-LVSMYGSGGRVDDARYVFDGIAEKTVVSW 281
Query: 168 NALVSGFTKNELYTDVLSIFVELSSDTE--LKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
NA+++ + +N Y + +F ++ ++P++ TF ++ AC + G +H
Sbjct: 282 NAMLTAYAQNGRYGKAVDLFWKMDEMRRALVEPNSVTFVNLLVACAATGFLEAGRKIHAE 341
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
A +GL+ + V ALI MY +C + +F+ +P +NLVSWN +I ++ +G E+
Sbjct: 342 VASLGLLSTLSVGGALINMYSECGNLVLAKSVFDSVPHKNLVSWNVLIGSYAGDGDGKEA 401
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
+ KM EG PD T ++VL
Sbjct: 402 LGVHQKME--LEGLKPDKFTFISVL 424
>gi|125526790|gb|EAY74904.1| hypothetical protein OsI_02796 [Oryza sativa Indica Group]
Length = 616
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 117/214 (54%), Gaps = 4/214 (1%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHEL-VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
EA LLQ C + G++VH V ++ I T+L Y+ CG D+ R F
Sbjct: 76 EAYASLLQCCVAAGCLRAGRQVHAAAVKRGPRYCRHAYIGTKLAVFYARCGALGDAERAF 135
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
+L +N F W A++ +++ L+ L + + + + DNF P V+KAC G+ +
Sbjct: 136 SALPAKNAFAWAAVIGMWSRAGLHGKALDGYAAML-EAGVPADNFVVPNVLKACAGLGLL 194
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G VHG A K GL V+V ++L+ YGKC V++ ++F+VMPER +VSWNS++ G+
Sbjct: 195 APGRAVHGYAWKPGLGNCVYVMSSLVDFYGKCGEVDDAREVFDVMPERTVVSWNSMLMGY 254
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
NG E+ DL +M EG +P ++V++ L
Sbjct: 255 IHNGRIDEAADLFYEMR--VEGVLPTRVSVLSFL 286
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 18/225 (8%)
Query: 85 SLLQENLHNADLKEAT---------GVL------LQACGHEKDIEI--GKRVHELVSAST 127
S+L +HN + EA GVL L D+E+ G R V+ S+
Sbjct: 249 SMLMGYIHNGRIDEAADLFYEMRVEGVLPTRVSVLSFLSASADLEVLDGGRQGHAVAVSS 308
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
D I+ + +I Y G + +F+ + R++ WN ++SG+ ++ L+
Sbjct: 309 GLEMDLILGSSMINFYCKVGLVEAAEVIFEQMVERDIVTWNLMISGYLQDGQTDKALTTC 368
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+ ++ LK D T VI AC + G H A + L D V +LI +Y
Sbjct: 369 HRML-ESGLKFDCVTLASVIMACVKSYRMEVGGAAHAYAVRNNLESDKTVFCSLIELYSS 427
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+E+M ++F+ + R++ +W ++IC ++++G E+ LL +M
Sbjct: 428 SGRIEQMRRVFDSIRRRDIATWKAMICAYADHGMGSEALKLLYQM 472
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL W+ L+SG ++N ++ +V+++ ++ + E P F + A A V +G +
Sbjct: 515 NLRTWSLLISGLSRNGMHPEVMNLCCKMQ-EVEPAPSPTIFSAALLAVKSAASVQYGKAM 573
Query: 223 HGMAAKMGLIGDVFVSNALIAMYG 246
H K GL+ V +L+ MYG
Sbjct: 574 HACIVKKGLLLSKSVVQSLLNMYG 597
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 120/208 (57%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L ACG+ + + GK H LV + D +N LITMY+ CG +R+VFD + R
Sbjct: 134 LFIACGNVRGLVHGKIGHCLVFKAG-LDGDEYVNHSLITMYARCGEMGFARKVFDEMGDR 192
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN+++SG++K + + +F+E+ + +PD T V+ ACG + D+G G V
Sbjct: 193 DLVSWNSMISGYSKMGFTKEAIGLFMEMREEG-FEPDEMTLVSVLGACGDLGDLGLGRWV 251
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
G + + + ++ +ALI MYGKC + ++F+ MP +++V+WN+II G+++NG S
Sbjct: 252 EGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGAS 311
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M E G PD +T++ VL
Sbjct: 312 NEAIVLFNGMR--EAGPHPDRVTMIEVL 337
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 114/208 (54%), Gaps = 2/208 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG D+ +G+ V V N ++ + LI MY CG + +RRVFDS+ +
Sbjct: 235 VLGACGDLGDLGLGRWVEGFVLEKKMEVNSYM-GSALIDMYGKCGDLISARRVFDSMPNK 293
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA+++G+ +N + + +F + + PD T V+ AC I + G V
Sbjct: 294 DVVTWNAIITGYAQNGASNEAIVLFNGMR-EAGPHPDRVTMIEVLSACSTIGALDLGKWV 352
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
A++ GL DV+V++ALI MY KC +++ V++FE MP +N VSWN++I + +G +
Sbjct: 353 ETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQA 412
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M P+ IT + VL
Sbjct: 413 QEALSLFRRMSKDNGTVQPNDITFIGVL 440
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 128/228 (56%), Gaps = 12/228 (5%)
Query: 84 LSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMY 143
L+ + H+ L E L++ C K + K++H + ++ +F++ +++I +
Sbjct: 20 LNFQTQKEHHQTLTEKLLSLIKQC---KSKNLLKQIHAQMLINSIPKPNFLL-SKIIDLK 75
Query: 144 SLCGFPLDSRRVFDSLKTRNLFQWNALVSGF-TKNELYTDVLSIFVELSSDTELKPDNFT 202
L L VF+ L N++ +N ++ G T + Y + ++ +L S LK +NFT
Sbjct: 76 DLAYASL----VFNQLTKPNIYAFNVMLRGLATTWKKYDFCVELYYKLKS-LGLKANNFT 130
Query: 203 FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+P + ACG + + G H + K GL GD +V+++LI MY +C + K+F+ M
Sbjct: 131 YPFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMG 190
Query: 263 ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+R+LVSWNS+I G+S+ GF+ E+ L ++M EEGF PD +T+V+VL
Sbjct: 191 DRDLVSWNSMISGYSKMGFTKEAIGLFMEMR--EEGFEPDEMTLVSVL 236
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 127/235 (54%), Gaps = 6/235 (2%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
E ++LN S+L+ + G +L+AC ++ + G +H + S D +
Sbjct: 460 EEETLNLFASMLRLRMEPDQF--TYGSVLKACSSQQALNSGMEIHNRIIKSG-LGLDSFV 516
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
LI MY CG +++++ D ++ + + WNA+++GFT + D S F E+
Sbjct: 517 GGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLK-MS 575
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
+KPDNFT+ V+ AC +A VG G +HG K+ L DV++++ L+ MY KC +++
Sbjct: 576 VKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSA 635
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+FE P ++ V+WN++ICG++++G E+ +M E P+ T V++L
Sbjct: 636 LVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQ--LENVRPNHATFVSIL 688
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 84 LSLLQENLHNADLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITM 142
+S LQ+N K T ++Q C ++ GK+ H + S F D I+ L+ M
Sbjct: 29 ISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSG-FIPDVYISNCLMKM 87
Query: 143 YSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK-------NELYTDV------------ 183
Y C + +VF+ + R++ +N ++SG+ NE + D
Sbjct: 88 YLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSML 147
Query: 184 ------------LSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
+ +F+++ E+ D TF V+KAC + D G G VHG+ +MG
Sbjct: 148 SGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGF 207
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
DV +AL+ MY KC +++ +K+F +P +N V W++II G +N
Sbjct: 208 YKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQN 255
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ ++C +++G ++H + F +D + T + MY+ CG D++R+F+SL
Sbjct: 283 VFRSCAGLSALKVGTQLHAH-ALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKH 341
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L +NA++ G +NE + L F +L + L + + AC I G +
Sbjct: 342 SLQCYNAIIVGCVRNEKGFEALQFF-QLLLKSGLGFNEISLSGAFSACASIKGDLDGRQL 400
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H ++ K L ++ V+N+++ MYGKC + E +F+ M R+ VSWN++I +NG
Sbjct: 401 HSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNE 460
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L M+ PD T +VL
Sbjct: 461 EETLNLFASMLRLR--MEPDQFTYGSVL 486
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 101/194 (52%), Gaps = 5/194 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
V+L+AC +D +G +VH L+ F D + + L+ MY+ C DS ++F +
Sbjct: 180 AVVLKACSVLEDGGLGIQVHGLI-VRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIP 238
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+N W+A+++G +N+ + L +F E+ + + V ++C G++ + G+
Sbjct: 239 VKNWVCWSAIIAGCVQNDEHILGLELFKEMQK-VGIGVSQSIYASVFRSCAGLSALKVGT 297
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII--CGFSE 278
+H A K D+ V A + MY KC + + ++F +P+ +L +N+II C +E
Sbjct: 298 QLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNE 357
Query: 279 NGF-SCESFDLLIK 291
GF + + F LL+K
Sbjct: 358 KGFEALQFFQLLLK 371
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 179 LYTDVLSIFVELS------SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
LY L IF + + T+L TF +I+ C + G H G I
Sbjct: 16 LYNKTLRIFTFCTISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFI 75
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
DV++SN L+ MY +C+ + K+FE M +R+++S+N++I G+++ G
Sbjct: 76 PDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAG 123
>gi|302801912|ref|XP_002982712.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
gi|300149811|gb|EFJ16465.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
Length = 734
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 109/189 (57%), Gaps = 1/189 (0%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC D+E G+ +H+ V S ++D ++ L+TMY+ CG L+ ++FD++ +N
Sbjct: 119 LAACAGLGDLEQGREIHKRVLESRSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKN 178
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L WNA++S F + + L ++ + + L+P+ F F ++ AC + ++ GS +H
Sbjct: 179 LVSWNAMISAFVQCDYPEQALELYHRMKRE-RLEPNGFVFASLLTACASLGNLQLGSSIH 237
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+GL D+ + NALI MY KC ++E +++F + R++ +W S+I G+++ GF
Sbjct: 238 QRITSLGLQRDIVMENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGS 297
Query: 284 ESFDLLIKM 292
E+F +M
Sbjct: 298 EAFAFYDRM 306
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 106/191 (55%), Gaps = 6/191 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ C +++ G+R+H+ + S + + + ++ MY+ CG D++ FD + +
Sbjct: 20 LLQECCSRRNVSEGRRLHDDLRRSG-YGDSSYLRRCVVQMYAKCGCLADAKAAFDEIADK 78
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N F WN ++SG+ ++ + L +F ++ ++ P+ F F + AC G+ D+ G +
Sbjct: 79 NDFVWNLMISGYARSGKNREALELFHKM----DIPPNGFIFASALAACAGLGDLEQGREI 134
Query: 223 HGMAAK-MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
H + + DV V N+L+ MY +C V E +K+F+ MP +NLVSWN++I F + +
Sbjct: 135 HKRVLESRSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQCDY 194
Query: 282 SCESFDLLIKM 292
++ +L +M
Sbjct: 195 PEQALELYHRM 205
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 113/209 (54%), Gaps = 10/209 (4%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
LQAC ++D + K + EL+ S D I L++ YS CG ++R++FD +++R+
Sbjct: 420 LQACSLKRDSRLSKTIRELIDWSGIDKMD-SIRADLVSAYSKCGDMEEARKIFDRMESRD 478
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W ++ G+ + L +F + + ++PD+ TF V++AC + D G VH
Sbjct: 479 VLTWTVMIKGYAQQGDSKAALELFHRMKPEG-VEPDSVTFSSVLQACSNLED---GREVH 534
Query: 224 G--MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+AA+ G + D F+ N LI MY +C + + ++FE M + +SW++I+ + +G
Sbjct: 535 ARILAAQGGKMSD-FLGNGLINMYARCGSMRDARQIFESMDRSSRISWSAIMTLCARHGQ 593
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ D M+ EG +PD +T++ +L
Sbjct: 594 HDDIIDTYRLMVN--EGVVPDGVTLIAIL 620
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 96/191 (50%), Gaps = 5/191 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC ++++G +H+ ++ S D ++ LI MYS CG ++ VF L TR
Sbjct: 220 LLTACASLGNLQLGSSIHQRIT-SLGLQRDIVMENALINMYSKCGCMDEALEVFSGLATR 278
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++F W ++++G+ + ++ + + + D + P + TF ++ AC + G +
Sbjct: 279 DVFTWTSMIAGYAQLGFGSEAFAFYDRMRRDC-VSPTSATFVALLSACSTLEQ---GKHL 334
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G V AL+ MY +C +E+ LF M +++ VSW++++ ++ G
Sbjct: 335 HEEVKAFGFESITVVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDP 394
Query: 283 CESFDLLIKMM 293
++ L +M+
Sbjct: 395 GKALTLFRQMI 405
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 7/209 (3%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL AC +E GK +HE V A F + ++ T L+ MYS CG D+ +F ++
Sbjct: 320 ALLSAC---STLEQGKHLHEEVKA-FGFESITVVETALMFMYSRCGSLEDAEFLFAKMQQ 375
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ W+A+V+ + L++F ++ + ++ TF ++AC D
Sbjct: 376 KDYVSWSAMVTSHAQFGDPGKALTLFRQMILEG-MQLSLPTFCSALQACSLKRDSRLSKT 434
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+ + G+ + L++ Y KC +EE K+F+ M R++++W +I G+++ G
Sbjct: 435 IRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFDRMESRDVLTWTVMIKGYAQQGD 494
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S + +L +M EG PD +T +VL
Sbjct: 495 SKAALELFHRMK--PEGVEPDSVTFSSVL 521
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+LQAC ++E G+ VH +++A +DF+ N LI MY+ CG D+R++F+S+
Sbjct: 520 VLQAC---SNLEDGREVHARILAAQGGKMSDFLGNG-LINMYARCGSMRDARQIFESMDR 575
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIAD 215
+ W+A+++ ++ + D++ + L + + PD T ++ +C G+ D
Sbjct: 576 SSRISWSAIMTLCARHGQHDDIIDTY-RLMVNEGVVPDGVTLIAILNSCSHAGLTD 630
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 191 SSDTELKPDNFT-FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
SS LK + + +++ C +V G +H + G ++ ++ MY KC
Sbjct: 4 SSGAALKESEVSRYARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCG 63
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI 300
+ + F+ + ++N WN +I G++ +G + E+ +L KM GFI
Sbjct: 64 CLADAKAAFDEIADKNDFVWNLMISGYARSGKNREALELFHKMDIPPNGFI 114
>gi|297850366|ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
lyrata]
gi|297338906|gb|EFH69323.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
lyrata]
Length = 1490
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 148/263 (56%), Gaps = 14/263 (5%)
Query: 46 EKSSLSLSAKT--NNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGV- 102
K +LS + K N + L +L +L E K+L+ SL Q+ + +K +T +
Sbjct: 33 RKKNLSFTKKKEPNIIPDEQLDYLCRNGSLLEAEKALD---SLFQQG---SKVKRSTYLN 86
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL++C I +G+ +H + D + T+L++MY+ CG +D+R+VFDS++ R
Sbjct: 87 LLESCIDSGSIHLGRILHARFGLFPE--PDVFVETKLLSMYAKCGCLVDARKVFDSMRER 144
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL+ W+A++ +++ + +V +F L + + PD+F FP +++ C DV G +
Sbjct: 145 NLYTWSAMIGAYSRENRWREVSKLF-RLMMEEGVLPDDFLFPKILQGCANCGDVETGKLI 203
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + K+G+ + VSN+++A+Y KC + K F M ER++V+WNS++ + +NG
Sbjct: 204 HSVVIKLGMSSCLRVSNSILAVYAKCGEWDFATKFFRRMKERDVVAWNSVLLAYCQNGKH 263
Query: 283 CESFDLLIKMMGCEEGFIPDVIT 305
E+ +L+ +M +EG P ++T
Sbjct: 264 EEAVELVEEME--KEGISPGLVT 284
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
T ++F W A++SG N + L +F ++ + P+ T + AC + + GS
Sbjct: 314 TADVFTWTAMISGLIHNGMRYQALDMFRKMFL-AGVVPNAVTIMSAVSACSYLKVINLGS 372
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH +A KMG I DV V N+L+ MY KC +E+ K+F+ + +++ +WNS+I G+ + G
Sbjct: 373 EVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAG 432
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++++L +M + P++IT T++
Sbjct: 433 YCGKAYELFTRMQ--DANVRPNIITWNTMI 460
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
D RN WN +++G+ +N D L IF ++ + P++ T ++ AC +
Sbjct: 482 DGKVQRNTATWNLIIAGYIQNGKKDDALEIFRKMQF-SRFMPNSVTILSLLPACANLLGT 540
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
+HG + L V NAL Y K + +F M +++++WNS+I G+
Sbjct: 541 KMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIGYSKTIFMGMETKDIITWNSLIGGY 600
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+G + +L +M +G P+ T+ +++
Sbjct: 601 VLHGSYGPALELFNQMK--TQGIKPNRGTLSSII 632
>gi|147794059|emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]
Length = 818
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++ACG + +G+ VH+ + F D + + LI YS G D+R +FD + ++
Sbjct: 153 VIKACGGLNSVALGRVVHDKIQF-MGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSK 211
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN +++G+ KN + + +F+E+ TE P++ TF CV+ C + FGS +
Sbjct: 212 DGVLWNVMLNGYVKNGDWDNATGVFMEMRR-TETNPNSVTFACVLSVCASEIMINFGSQL 270
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ GL D V+N L+AMY KC + + +LF++MP+ +LV+WN +I G+ +NGF
Sbjct: 271 HGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFM 330
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ L +M+ G PD IT + LP
Sbjct: 331 DEASCLFHEMI--SAGMKPDSITFSSFLP 357
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 113/225 (50%), Gaps = 5/225 (2%)
Query: 87 LQENLHNAD-LKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSL 145
LQ ++HN D L +LQ C + G++ H + + N I+ T+L+ MY L
Sbjct: 35 LQFSIHNDDSLAPQLVSILQTCTDPSGLSHGRQAHAQMLVNGIGYNG-ILGTKLLGMYVL 93
Query: 146 CGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPC 205
CG LD++ +F L+ WN ++ GFT + L + ++ L PD +TFP
Sbjct: 94 CGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTL-PDKYTFPY 152
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
VIKACGG+ V G VH MG DVFV ++LI Y + + + LF+ MP ++
Sbjct: 153 VIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKD 212
Query: 266 LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
V WN ++ G+ +NG + + ++M E P+ +T VL
Sbjct: 213 GVLWNVMLNGYVKNGDWDNATGVFMEMRRTETN--PNSVTFACVL 255
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 118/244 (48%), Gaps = 22/244 (9%)
Query: 86 LLQENLHNADLKEATGV------------------LLQACGHEKDIEIGKRVHELVSAST 127
+L + N D ATGV +L C E I G ++H LV +S
Sbjct: 219 MLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSG 278
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
+ + NT L+ MY+ CG D+RR+FD + +L WN ++SG+ +N + +F
Sbjct: 279 LEMDSPVANT-LLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLF 337
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
E+ S +KPD+ TF + A + G +H + G+ DVF+ +ALI +Y K
Sbjct: 338 HEMIS-AGMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFK 396
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
C VE K+F+ ++V ++I G+ NG + + ++ ++ +E + +T+
Sbjct: 397 CRDVEMAHKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLL--QERMRANSVTLA 454
Query: 308 TVLP 311
+VLP
Sbjct: 455 SVLP 458
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 113/225 (50%), Gaps = 6/225 (2%)
Query: 86 LLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSL 145
LLQE + + A+ +L AC + +GK +H + + + ++ + ++ MY+
Sbjct: 441 LLQERMRANSVTLAS--VLPACAGLAALTLGKELHGHILKNGHGGSCYV-GSAIMDMYAK 497
Query: 146 CGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPC 205
CG + + F + ++ WN++++ ++N + + +F ++ K D +
Sbjct: 498 CGKLDLAHQTFIGISXKDAVCWNSMITSCSQNGKPEEAIDLFRQMGM-AGTKYDCVSISA 556
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
+ AC + + +G +H + D+F +ALI MY KC ++ ++F++M E+N
Sbjct: 557 ALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDMMEEKN 616
Query: 266 LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
VSWNSII + +G +S +L M+G +G PD +T + ++
Sbjct: 617 EVSWNSIIAAYGNHGRLKDSLNLFHGMLG--DGIQPDHVTFLAII 659
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + + GK +H + F +D + LI MYS CG + RVFD ++ +N
Sbjct: 558 LSACANLPALHYGKEIHAFMMRGA-FRSDLFAESALIDMYSKCGNLDLACRVFDMMEEKN 616
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WN++++ + + D L++F + D ++PD+ TF +I ACG V G+H
Sbjct: 617 EVSWNSIIAAYGNHGRLKDSLNLFHGMLGDG-IQPDHVTFLAIISACGHAGQV--DEGIH 673
Query: 224 G---MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
M ++G++ + ++ ++G+ + E + MP
Sbjct: 674 YFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMP 715
>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Glycine max]
Length = 805
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 131/230 (56%), Gaps = 6/230 (2%)
Query: 67 LQEITTLCEESKSLNKALSLLQENLHNADLKEAT-GVLLQACGHEKDIEIGKRVH-ELVS 124
L ++LC+ + SL Q + N + A G LLQ C +E+ + + ++H +++
Sbjct: 20 LTHFSSLCKHGRIREAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERALPLALQLHADVIK 79
Query: 125 ASTQFS-NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDV 183
F+ NDF+I ++L+ +Y+ CG + R+F + N+F W A++ T+ +
Sbjct: 80 RGPTFALNDFVI-SKLVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCEEA 138
Query: 184 LSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK-MGLIGDVFVSNALI 242
L ++++ D L PDNF P V+KACG + V FG GVH K +GL V+V+ +L+
Sbjct: 139 LFGYIKMQQDG-LPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLV 197
Query: 243 AMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
MYGKC VE+ K+F+ M ERN V+WNS++ +++NG + E+ + +M
Sbjct: 198 DMYGKCGAVEDAGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREM 247
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 9/211 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG K + GK VH V + + T L+ MY CG D+ +VFD + R
Sbjct: 160 VLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAGKVFDEMSER 219
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCV---IKACGGIADVGFG 219
N WN++V + +N + + + +F E+ L+ T + AC VG G
Sbjct: 220 NDVTWNSMVVTYAQNGMNQEAIRVFREM----RLQGVEVTLVALSGFFTACANSEAVGEG 275
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
HG+A GL D + ++++ Y K +EE +F M +++V+WN ++ G+++
Sbjct: 276 RQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQF 335
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G ++ ++ M EEG D +T+ +L
Sbjct: 336 GMVEKALEMCCVMR--EEGLRFDCVTLSALL 364
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 96/201 (47%), Gaps = 6/201 (2%)
Query: 106 ACGHEKDIEIGKRVHEL-VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNL 164
AC + + + G++ H L V + N ++ + ++ Y G ++ VF ++ +++
Sbjct: 265 ACANSEAVGEGRQGHGLAVVGGLELDN--VLGSSIMNFYFKVGLIEEAEVVFRNMAVKDV 322
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
WN +V+G+ + + L + + + L+ D T ++ D+ G H
Sbjct: 323 VTWNLVVAGYAQFGMVEKALEMCCVMREEG-LRFDCVTLSALLAVAADTRDLVLGMKAHA 381
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCE 284
K GDV VS+ +I MY KC ++ ++F + ++++V WN+++ +E G S E
Sbjct: 382 YCVKNDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAEQGLSGE 441
Query: 285 SFDLLIKMMGCEEGFIPDVIT 305
+ L +M E P+V++
Sbjct: 442 ALKLFFQMQ--LESVPPNVVS 460
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 77/148 (52%), Gaps = 3/148 (2%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL W ++SG +N + + +F E+ D ++P++ + + C +A + G +
Sbjct: 492 NLITWTTMMSGLVQNGFGSGAMMVFREMQ-DVGIRPNSMSITSALSGCTSMALLKHGRAI 550
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + L + + +++ MY KC ++ +F++ + L +N++I ++ +G +
Sbjct: 551 HGYVMRRDLSQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTKELYVYNAMISAYASHGQA 610
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M +EG +PD IT+ +VL
Sbjct: 611 REALVLFKQME--KEGIVPDHITLTSVL 636
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L C ++ G+ +H V S I T ++ MY+ CG ++ VF T+
Sbjct: 535 LSGCTSMALLKHGRAIHGYV-MRRDLSQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTKE 593
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGF 218
L+ +NA++S + + + L +F ++ + + PD+ T V+ AC GG+ G
Sbjct: 594 LYVYNAMISAYASHGQAREALVLFKQMEKEG-IVPDHITLTSVLSACSHGGLMKEGI 649
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 114/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ+C KD+ +GK+VHE + N +I NT L+ +Y+ CG ++R++FD +
Sbjct: 34 LLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNT-LLKLYAHCGSVNEARQLFDKFSNK 92
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN ++SG+ L + ++F L L+PD FTF ++ AC A + +G +
Sbjct: 93 SVVSWNVMISGYAHRGLAQEAFNLFT-LMQQERLEPDKFTFVSILSACSSPAVLNWGREI 151
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + GL D V NALI+MY KC V + ++F+ M R+ VSW ++ ++E+G+
Sbjct: 152 HVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYG 211
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
ES M+ +E P IT + VL
Sbjct: 212 EESLKTYHAML--QERVRPSRITYMNVL 237
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 107/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + GK +H +A +D LI MYS G D+R+VFD + R
Sbjct: 337 VLSACARPGGLARGKEIHAR-AAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKR 395
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W L+ + + + + F ++ +K + T+ CV+KAC + +G +
Sbjct: 396 DVVSWTTLLGRYADCDQVVESFTTFKQMLQQG-VKANKITYMCVLKACSNPVALKWGKEI 454
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K GL+ D+ V+NAL++MY KC VE+ +++FE M R++V+WN++I G +NG
Sbjct: 455 HAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRG 514
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ M EG P+ T V VL
Sbjct: 515 LEALQRYEVMK--SEGMRPNAATFVNVL 540
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 123/233 (52%), Gaps = 6/233 (2%)
Query: 78 KSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
+SL ++LQE + + + +L ACG +E GK++H + S ++ +D ++T
Sbjct: 213 ESLKTYHAMLQERVRPSRITYMN--VLSACGSLAALEKGKQIHAHIVES-EYHSDVRVST 269
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L MY CG D+R VF+ L R++ WN ++ GF + + F + + +
Sbjct: 270 ALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEG-VA 328
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
PD T+ V+ AC + G +H AAK GL+ DV NALI MY K +++ ++
Sbjct: 329 PDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQV 388
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ MP+R++VSW +++ +++ ESF +M+ ++G + IT + VL
Sbjct: 389 FDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQML--QQGVKANKITYMCVL 439
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D++ + ++++C D+ G VH + G+ +V+++N L+ +Y C V E +LF
Sbjct: 27 DSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLF 86
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +++VSWN +I G++ G + E+F+L M +E PD T V++L
Sbjct: 87 DKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQ--QERLEPDKFTFVSIL 136
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 163/331 (49%), Gaps = 37/331 (11%)
Query: 3 LYNCSSACLWSPLFPSLRQKKSQPQ------------------FPATVIQRNKHSLRSIF 44
L+ CS L+S + +L + Q F A +I + H R
Sbjct: 7 LHECSRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAH-FRDPT 65
Query: 45 KEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGV-- 102
S L++ +NN ++ I + ++ALSL E L+ T
Sbjct: 66 SSFSVFRLASPSNN-----VYLWNSIIRALTHNGLFSEALSLYSET-QRIRLQPDTYTFP 119
Query: 103 -LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGF-PLD-SRRVFDSL 159
++ AC D E+ K +H+ V F +D I LI MY C F LD +R+VF+ +
Sbjct: 120 SVINACAGLLDFEMAKSIHDRV-LDMGFGSDLYIGNALIDMY--CRFNDLDKARKVFEEM 176
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
R++ WN+L+SG+ N + + L I+ + + PD++T V++ACGG+ V G
Sbjct: 177 PLRDVVSWNSLISGYNANGYWNEALEIYYRFR-NLGVVPDSYTMSSVLRACGGLGSVEEG 235
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+HG+ K+G+ DV V+N L++MY K + + ++F+ M R+ VSWN++ICG+S+
Sbjct: 236 DIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQV 295
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G ES L ++M+ F PD++T+ ++L
Sbjct: 296 GLYEESIKLFMEMV---NQFKPDLLTITSIL 323
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 121/211 (57%), Gaps = 9/211 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQACGH D+E GK VH+ + S + D + LI MY+ CG L S+ VF +K +
Sbjct: 322 ILQACGHLGDLEFGKYVHDYMITSG-YECDTTASNILINMYAKCGNLLASQEVFSGMKCK 380
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN++++ + +N + + + +F + +D +KPD+ T+ ++ + D+ G +
Sbjct: 381 DSVSWNSMINVYIQNGSFDEAMKLFKMMKTD--VKPDSVTYVMLLSMSTQLGDLHLGKEL 438
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII--CGFSENG 280
H AKMG ++ VSN L+ MY KC + + +K+FE M R++++WN+II C SE+
Sbjct: 439 HCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSED- 497
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
C +I M EG PD+ T++++LP
Sbjct: 498 --CNLGLRMISRMR-TEGVTPDMATMLSILP 525
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 110/208 (52%), Gaps = 6/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG +E G +H L+ D I+N L++MY +D RR+FD + R
Sbjct: 222 VLRACGGLGSVEEGDIIHGLIE-KIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLR 280
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN ++ G+++ LY + + +F+E+ + + KPD T +++ACG + D+ FG V
Sbjct: 281 DAVSWNTMICGYSQVGLYEESIKLFMEMVN--QFKPDLLTITSILQACGHLGDLEFGKYV 338
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G D SN LI MY KC + ++F M ++ VSWNS+I + +NG
Sbjct: 339 HDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSF 398
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L KMM + PD +T V +L
Sbjct: 399 DEAMKLF-KMMKTD--VKPDSVTYVMLL 423
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 122/241 (50%), Gaps = 15/241 (6%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVLLQACGHE-KDIEIGKRVH-ELVSASTQFSNDF 133
++ S ++A+ L + + T V+L + + D+ +GK +H +L A F+++
Sbjct: 394 QNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDL--AKMGFNSNI 451
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
+++ L+ MY+ CG DS +VF+++K R++ WN +++ +E L + + ++
Sbjct: 452 VVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTE 511
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+ PD T ++ C +A G +HG K+GL DV V N LI MY KC +
Sbjct: 512 G-VTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRN 570
Query: 254 MVKLFEVMPERNLVSWNSII--CGFSENGFSCESFDLLIKMMGCEE--GFIPDVITVVTV 309
++F++M +++V+W ++I CG G ++ G E G +PD + V +
Sbjct: 571 SFQVFKLMKTKDVVTWTALISACGMYGEGKKA------VRAFGEMEAAGIVPDHVAFVAI 624
Query: 310 L 310
+
Sbjct: 625 I 625
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 120/209 (57%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC K +++GK VHE V+ D + + LI +Y+ G D++ +FD++ +
Sbjct: 64 VVKACCGLKSVKMGKIVHETVNL-MGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQK 122
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN +++G+ KN + + IF+E+ +E+KP++ TF CV+ C A + G+ +
Sbjct: 123 DSVLWNVMLNGYVKNGDSGNAIKIFLEMRH-SEIKPNSVTFACVLSVCASEAMLDLGTQL 181
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+A GL D V+N L+AMY KC ++ KLF+ P+ +LVSWN II G+ +NG
Sbjct: 182 HGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLM 241
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ L M+ G PD IT + LP
Sbjct: 242 GEAEHLFRGMI--SAGIKPDSITFASFLP 268
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 89/169 (52%), Gaps = 3/169 (1%)
Query: 142 MYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF 201
MY G D++ +F +L+ WN ++ GFT + L ++++ + PD +
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLG-AGVSPDKY 59
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
TFP V+KAC G+ V G VH MGL DVFV ++LI +Y + + + LF+ +
Sbjct: 60 TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
P+++ V WN ++ G+ +NG S + + ++M E P+ +T VL
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSE--IKPNSVTFACVL 166
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+ +GK +H + T+ + + ++ MY+ CG + RVF+ + ++ WN++++
Sbjct: 377 LNLGKELHGSI-IKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMIT 435
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
++N + +++F ++ + + D + + AC + + +G +HG+ K L
Sbjct: 436 SCSQNGRPGEAINLFRQMGMEGT-RYDCVSISGALSACANLPALHYGKEIHGLMIKGPLR 494
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
D++ ++LI MY KC + ++F+ M ERN VSWNSII + +G E L +M
Sbjct: 495 SDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEM 554
Query: 293 MGCEEGFIPDVITVVTVL 310
+ G PD +T + ++
Sbjct: 555 L--RNGIQPDHVTFLGII 570
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C E +++G ++H ++ S D + L+ MYS C +R++FD+
Sbjct: 165 VLSVCASEAMLDLGTQLHG-IAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQS 223
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN ++SG+ +N L + +F + S +KPD+ TF + + + +
Sbjct: 224 DLVSWNGIISGYVQNGLMGEAEHLFRGMIS-AGIKPDSITFASFLPCVNELLSLKHCKEI 282
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + ++ DVF+ +ALI +Y KC VE K+ + V ++I G+ NG +
Sbjct: 283 HGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKN 342
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ + ++ +E P +T ++ P
Sbjct: 343 KEALEAFRWLV--QERMKPTSVTFSSIFP 369
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 3/160 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + + GK +H L+ +D + LI MY+ CG SRRVFD ++ RN
Sbjct: 469 LSACANLPALHYGKEIHGLM-IKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERN 527
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG-SGV 222
WN+++S + + + L++F E+ + ++PD+ TF +I ACG V G
Sbjct: 528 EVSWNSIISAYGNHGDLKECLALFHEMLRNG-IQPDHVTFLGIISACGHAGQVDEGIRYY 586
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
H M + G+ + + M+G+ ++E + MP
Sbjct: 587 HLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMP 626
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + + LI +Y C ++++ + + ++SG+ N + L F L
Sbjct: 294 DVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLV 353
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ +KP + TF + A G+A + G +HG K L V +A++ MY KC +
Sbjct: 354 QE-RMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRL 412
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCE 296
+ ++F + E++ + WNS+I S+NG E+ +L + MG E
Sbjct: 413 DLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLF-RQMGME 456
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 133/240 (55%), Gaps = 11/240 (4%)
Query: 74 CEESKSLNKALSLLQENLH---NADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFS 130
C ++ +A+ LL+++ DL++ L++ C K +E G+R+H + + T
Sbjct: 19 CGGVDAIREAVDLLEQSGAAGGTGDLEQ----LIRRCAGAKALEEGRRIHRWMDSGTLDR 74
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
F+ N L+ MY CG ++++RVFD+++ +N+F W L++GF ++ + + +F +
Sbjct: 75 PRFLSNL-LVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRM 133
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
+ EL PD I +CG + G +H AA G+ D+ +NA+I MYGKC
Sbjct: 134 CQEGEL-PDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGS 192
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E +F MPE+N++SW+++I F +N + E+ L K+M +EG D IT V+VL
Sbjct: 193 IGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEAL-LFFKLMQ-QEGMELDRITYVSVL 250
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 116/231 (50%), Gaps = 6/231 (2%)
Query: 82 KALSLLQENLHNADLKEATGVL--LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
+A+ L +L + +L + +CG K + G+ +H +AS +D + +
Sbjct: 125 EAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHS-AAASCGMDSDLVTANAI 183
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
I MY CG ++ VF + +N+ W+ +++ F +NEL + L +F +L ++ D
Sbjct: 184 INMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEAL-LFFKLMQQEGMELD 242
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
T+ V+ A + + G +H GL + V N L+ MYGKC ++ +F+
Sbjct: 243 RITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFD 302
Query: 260 VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
M E+N+VSWN+++ + +NG S E+ L M EG P+ IT VT+L
Sbjct: 303 SMVEKNVVSWNAMLAAYGQNGRSREALALFDSMD--LEGVRPNDITFVTIL 351
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 113 IEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
+E+GK +H +V A S ++ L+ MY CG P D+R VFDS+ +N+ WNA++
Sbjct: 259 LELGKALHVRIVYAGLDTS--IVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAML 316
Query: 172 SGFTKNELYTDVLSIFVELSSDTE-LKPDNFTFPCVIKAC---GGIADVGFGSGVHGMAA 227
+ + +N + L++F S D E ++P++ TF ++ C G D S M
Sbjct: 317 AAYGQNGRSREALALFD--SMDLEGVRPNDITFVTILYCCSHSGKFKDAV--SHFVEMRQ 372
Query: 228 KMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICG 275
G+ LI M G+ +EE +L + MP + V W S++C
Sbjct: 373 DFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCA 421
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 120/212 (56%), Gaps = 10/212 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+AC + K ++ GK +H+ V + ND + LI +Y C ++ VFD+++
Sbjct: 9 LLRACMNSKSLKQGKLIHQKV-VTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENP 67
Query: 163 -NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+ WN L++G+TKN +Y + L +F +L LKPD++T+P V+KACGG+ G
Sbjct: 68 CEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKM 127
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII-CGFSENG 280
+H K GL+ D+ V ++L+ MY KC E+ + LF MPE+++ WN++I C +
Sbjct: 128 IHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGN 187
Query: 281 F--SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F + E F L+ + GF P+ +T+ T +
Sbjct: 188 FKEALEYFGLMRRF-----GFEPNSVTITTAI 214
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 119/232 (51%), Gaps = 7/232 (3%)
Query: 82 KALSLLQENLHNADLKEATGV---LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
+AL L ++ LH LK + +L+ACG +GK +H + T D ++ +
Sbjct: 88 EALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIHTCL-VKTGLMMDIVVGSS 146
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+ MY+ C + +F+ + +++ WN ++S + ++ + + L F L +P
Sbjct: 147 LVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYF-GLMRRFGFEP 205
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
++ T I +C + D+ G +H G + D F+S+AL+ MYGKC +E +++F
Sbjct: 206 NSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVF 265
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E MP++ +V+WNS+I G+ G S L +M EG P + T+ +++
Sbjct: 266 EQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYN--EGVKPTLTTLSSLI 315
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ C + GK VH + + +D IN+ L+ +Y CG + +F +
Sbjct: 314 LIMVCSRSARLLEGKFVHG-YTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKS 372
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN ++SG+ + L +F E+ + ++PD TF V+ AC +A + G +
Sbjct: 373 KVVSWNVMISGYVAEGKLFEALGLFSEMRK-SYVEPDAITFTSVLTACSQLAALEKGEEI 431
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + + L + V AL+ MY KC V+E +F+ +P+R+LVSW S+I + +G +
Sbjct: 432 HNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQA 491
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L +M+ + PD +T + +L
Sbjct: 492 YVALELFAEML--QSNMKPDRVTFLAIL 517
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 106/208 (50%), Gaps = 6/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ +C D+ G +HE + ++ F D I++ L+ MY CG + VF+ + +
Sbjct: 214 ISSCARLLDLNRGMEIHEEL-INSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKT 272
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN+++SG+ + +F + ++ +KP T +I C A + G VH
Sbjct: 273 VVAWNSMISGYGLKGDSISCIQLFKRMYNEG-VKPTLTTLSSLIMVCSRSARLLEGKFVH 331
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G + + DVF++++L+ +Y KC VE +F+++P+ +VSWN +I G+ G
Sbjct: 332 GYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLF 391
Query: 284 ESFDLLIKMMGCEEGFI-PDVITVVTVL 310
E+ L +M + ++ PD IT +VL
Sbjct: 392 EALGLFSEM---RKSYVEPDAITFTSVL 416
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E G+ +H L+ + N+ ++ L+ MY+ CG ++ VF L R
Sbjct: 415 VLTACSQLAALEKGEEIHNLI-IEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKR 473
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGS 220
+L W ++++ + + L +F E+ + +KPD TF ++ ACG G+ D G
Sbjct: 474 DLVSWTSMITAYGSHGQAYVALELFAEMLQ-SNMKPDRVTFLAILSACGHAGLVDEG-CY 531
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 263
+ M G+I V + LI + G+ + E ++ + PE
Sbjct: 532 YFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPE 574
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 136/251 (54%), Gaps = 19/251 (7%)
Query: 75 EESKSLNKALSLLQENLHNAD------------LKE---ATGVLLQACGHEKDIEIGKRV 119
++S S N ++ L++N H D +K G +L+AC + +E G V
Sbjct: 457 KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMV 516
Query: 120 HELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNEL 179
H+ V S S+ F+ +T ++ MY CG +++++ D + + + WNA++SGF+ N+
Sbjct: 517 HDKVIKSGLGSDAFVAST-VVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKE 575
Query: 180 YTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSN 239
+ F E+ D LKPD+FTF V+ C +A + G +HG K ++ D ++S+
Sbjct: 576 SEEAQKFFSEML-DMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISS 634
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
L+ MY KC + + + +FE + +R+ VSWN++ICG++ +G E+ + +M +E
Sbjct: 635 TLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQ--KENV 692
Query: 300 IPDVITVVTVL 310
+P+ T V VL
Sbjct: 693 VPNHATFVAVL 703
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 114/216 (52%), Gaps = 5/216 (2%)
Query: 95 DLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRR 154
D+ +GV AC K G++VH L S F D +N ++ +Y C +++
Sbjct: 392 DVVSLSGVF-SACAETKGYFQGQQVHCLAIKSG-FDVDICVNNAVLDLYGKCKALMEAYL 449
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
+F +K ++ WNA+++ +N Y D + F E+ +KPD+FT+ V+KAC +
Sbjct: 450 IFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLR-FGMKPDDFTYGSVLKACAALR 508
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+ +G VH K GL D FV++ ++ MY KC ++E KL + + + +VSWN+I+
Sbjct: 509 SLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILS 568
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
GFS N S E+ +M+ + G PD T TVL
Sbjct: 569 GFSLNKESEEAQKFFSEML--DMGLKPDHFTFATVL 602
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 87/154 (56%), Gaps = 1/154 (0%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
++T YS G + +FD + ++ WNALVSG+ + ++ + + +FVE++ + P
Sbjct: 131 MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRG-VSP 189
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D TF ++K+C + ++ G VH +A K GL DV +AL+ MYGKC +++ + F
Sbjct: 190 DRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFF 249
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
MPERN VSW + I G +N +L I+M
Sbjct: 250 YGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEM 283
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 101/207 (48%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
++C + G+++H + +FS+D ++ T ++ +Y+ D+RR F L
Sbjct: 299 FRSCAAMSCLNTGRQLHAH-AIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHT 357
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ NA++ G + L + + +F + + ++ D + V AC G VH
Sbjct: 358 VETSNAMMVGLVRAGLGIEAMGLF-QFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVH 416
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+A K G D+ V+NA++ +YGKC + E +F+ M +++ VSWN+II +NG
Sbjct: 417 CLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYD 476
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +M+ G PD T +VL
Sbjct: 477 DTILHFNEML--RFGMKPDDFTYGSVL 501
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
VLL++C +++ +G +VH L + T D + L+ MY C D+ F +
Sbjct: 195 AVLLKSCSALEELSLGVQVHAL-AVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMP 253
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN W A ++G +NE Y L +F+E+ L ++ ++C ++ + G
Sbjct: 254 ERNWVSWGAAIAGCVQNEQYVRGLELFIEMQR-LGLGVSQPSYASAFRSCAAMSCLNTGR 312
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H A K D V A++ +Y K + + + F +P + + N+++ G G
Sbjct: 313 QLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAG 372
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M+ F DV+++ V
Sbjct: 373 LGIEAMGLFQFMIRSSIRF--DVVSLSGVF 400
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
D N ++ Y + V LF+ MP+ ++VSWN+++ G+ + G ES DL ++M
Sbjct: 124 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEM- 182
Query: 294 GCEEGFIPDVITVVTVL 310
G PD T +L
Sbjct: 183 -ARRGVSPDRTTFAVLL 198
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
G + FVSN L+ MY +CA ++F+ MP R+ VSWN+++ +S G
Sbjct: 89 GFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAG 139
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 112/208 (53%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C D+ G+ VH ++A S + + T L MY+ C P D+RRVFD + R
Sbjct: 231 LLKLCAARADLATGRAVHAQLAARG-LSPEALAATALANMYAKCRRPGDARRVFDRMPAR 289
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNALV+G+ +N L + + V + + +PD T V+ AC +G V
Sbjct: 290 DRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREV 349
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A + G V VS A++ +Y KC V+ K+F+ M +RN VSWN++I G++ENG +
Sbjct: 350 HAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDA 409
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M+G EG ++V+ L
Sbjct: 410 TEALALFKRMVG--EGVDVTDVSVLAAL 435
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 110/207 (53%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L ACG ++ G+RVHEL+ SN ++N LITMY C + +VFD L +
Sbjct: 435 LHACGELGFLDEGRRVHELLVRIGLESNVNVMNA-LITMYCKCKRTDLAAQVFDELGYKT 493
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WNA++ G T+N D + +F + + +KPD+FT +I A I+D +H
Sbjct: 494 RVSWNAMILGCTQNGSSEDAVRLFSRMQLEN-VKPDSFTLVSIIPALADISDPLQARWIH 552
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G + ++ L DV+V ALI MY KC V LF +R++++WN++I G+ +G
Sbjct: 553 GYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGK 612
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L +M G +P+ T ++VL
Sbjct: 613 VAVELFEEMK--SSGKVPNETTFLSVL 637
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Query: 183 VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALI 242
L+ F +S + P TF ++K C AD+ G VH A GL + + AL
Sbjct: 208 ALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALA 267
Query: 243 AMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
MY KC + ++F+ MP R+ V+WN+++ G++ NG + + ++++M E+G PD
Sbjct: 268 NMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQE-EDGERPD 326
Query: 303 VITVVTVLP 311
+T+V+VLP
Sbjct: 327 AVTLVSVLP 335
>gi|356564808|ref|XP_003550640.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37320-like [Glycine max]
Length = 501
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 127/208 (61%), Gaps = 6/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ +CG ++D+ G + H L + +T F + + LI++YS C F D+ RVF+ + RN
Sbjct: 114 VSSCGSKRDLWGGIQYHCL-AITTGFVASVYVGSSLISLYSRCAFLGDACRVFEEMPVRN 172
Query: 164 LFQWNALVSGFTKNELYTDV-LSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W A+++GF + E + D+ L +F ++ ++L+P+ FT+ ++ AC G +G G
Sbjct: 173 VVSWTAIIAGFAQ-EWHVDMCLELFQQMRG-SDLRPNYFTYTSLLSACMGSGALGHGRCA 230
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +MG + + NALI+MY KC +++ + +FE M R++V+WN++I G++++G +
Sbjct: 231 HCQIIRMGFHSYLHIENALISMYSKCGAIDDALHIFENMVSRDVVTWNTMISGYAQHGLA 290
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L +M+ ++G PD +T + VL
Sbjct: 291 QEAINLFEEMI--KQGVNPDAVTYLGVL 316
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D F + +CG D+ G H +A G + V+V ++LI++Y +CAF+ + ++F
Sbjct: 106 DVFFLSQAVSSCGSKRDLWGGIQYHCLAITTGFVASVYVGSSLISLYSRCAFLGDACRVF 165
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E MP RN+VSW +II GF++ +L +M G + P+ T ++L
Sbjct: 166 EEMPVRNVVSWTAIIAGFAQEWHVDMCLELFQQMRGSD--LRPNYFTYTSLL 215
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 117/208 (56%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E G+R+H+ V + ++ + NT L+ MYS+CG D+R+VFD + R
Sbjct: 435 ILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNT-LVNMYSMCGSVKDARQVFDRMIQR 493
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ +NA++ G+ + L + L +F L + LKPD T+ ++ AC + + +
Sbjct: 494 DIVAYNAMIGGYAAHNLGKEALKLFDRLQEEG-LKPDKVTYINMLNACANSGSLEWAREI 552
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + K G D V NAL++ Y KC + +FE M +RN++SWN+II G +++G
Sbjct: 553 HTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRG 612
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M EG PD++T V++L
Sbjct: 613 QDALQLFERMK--MEGVKPDIVTFVSLL 638
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 115/209 (55%), Gaps = 4/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+LL AC + + GK +H V A F++D + LI+MYS CG D+R VFD +
Sbjct: 333 ILLNACVNSAALHWGKEIHSRV-AKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVR 391
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+++ W A++ G K+ + L+++ E+ ++P+ T+ ++ AC A + +G
Sbjct: 392 KDVISWTAMIGGLAKSGFGAEALTVYQEMQQ-AGVEPNRVTYTSILNACSSPAALEWGRR 450
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H + GL D V N L+ MY C V++ ++F+ M +R++V++N++I G++ +
Sbjct: 451 IHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNL 510
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L ++ EEG PD +T + +L
Sbjct: 511 GKEALKLFDRLQ--EEGLKPDKVTYINML 537
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 108/198 (54%), Gaps = 4/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
++ GK VH + + S D + T L+ MY+ CG D R+VF+ L R+L WN ++
Sbjct: 243 LKWGKAVHSRILNAGHES-DTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIG 301
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G + + + ++ ++ + + P+ T+ ++ AC A + +G +H AK G
Sbjct: 302 GLAEGGYWEEASEVYNQMQREGVM-PNKITYVILLNACVNSAALHWGKEIHSRVAKAGFT 360
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
D+ V NALI+MY +C +++ +F+ M ++++SW ++I G +++GF E+ + +M
Sbjct: 361 SDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEM 420
Query: 293 MGCEEGFIPDVITVVTVL 310
+ G P+ +T ++L
Sbjct: 421 Q--QAGVEPNRVTYTSIL 436
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 113/210 (53%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-- 160
+L+ C KD+ G++VH+ + + + +N LI MY CG ++R+V+ L
Sbjct: 29 MLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNA-LINMYIQCGSIEEARQVWKKLSYM 87
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R + WNA+V G+ + L + ++ L PD T + +C + +G
Sbjct: 88 ERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHG-LAPDRTTIMSFLSSCKSPGALEWGR 146
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H A + GL+ DV V+N ++ MY KC +EE ++F+ M ++++VSW I G+++ G
Sbjct: 147 EIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCG 206
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S +F++ KM +EG +P+ IT ++VL
Sbjct: 207 RSETAFEIFQKME--QEGVVPNRITYISVL 234
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 132/273 (48%), Gaps = 18/273 (6%)
Query: 41 RSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEAT 100
R ++K+ S + + + NA G ++Q + KAL LL++ + + T
Sbjct: 78 RQVWKKLSYMERTVHSWNAMVVG--YIQ--------YGYIEKALKLLRQMQQHGLAPDRT 127
Query: 101 GVL--LQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
++ L +C +E G+ +H + + A F D + ++ MY+ CG ++R VFD
Sbjct: 128 TIMSFLSSCKSPGALEWGREIHFQAMQAGLLF--DVKVANCILNMYAKCGSIEEAREVFD 185
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
++ +++ W + G+ IF ++ + + P+ T+ V+ A A +
Sbjct: 186 KMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEG-VVPNRITYISVLNAFSSPAALK 244
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
+G VH G D V AL+ MY KC ++ ++FE + R+L++WN++I G +
Sbjct: 245 WGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLA 304
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E G+ E+ ++ +M EG +P+ IT V +L
Sbjct: 305 EGGYWEEASEVYNQMQ--REGVMPNKITYVILL 335
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 151/288 (52%), Gaps = 19/288 (6%)
Query: 28 FPATVIQRNKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLL 87
F A +I + H R S L++ +NN ++ I + ++ALSL
Sbjct: 109 FSAKLIAKYAH-FRDPTSSFSVFRLASPSNN-----VYXWNSIIRALTHNGLFSEALSLY 162
Query: 88 QENLHNADLKEATGV---LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYS 144
E L+ T ++ AC D E+ K +H+ V F +D I LI MY
Sbjct: 163 SET-QRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRV-LXMGFGSDLYIGNALIDMY- 219
Query: 145 LCGF-PLD-SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFT 202
C F LD +R+VF+ + R++ WN+L+SG+ N + + L I+ + + PD++T
Sbjct: 220 -CRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFR-NLGVVPDSYT 277
Query: 203 FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
V++ACGG+ V G +HG+ K+G+ DV V+N L++MY K + + ++F+ M
Sbjct: 278 MSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMV 337
Query: 263 ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
R+ VSWN++ICG+S+ G ES L ++M+ F PD++T+ ++L
Sbjct: 338 LRDAVSWNTMICGYSQVGLYEESIKLFMEMV---NQFKPDLLTITSIL 382
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 122/211 (57%), Gaps = 9/211 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQACGH D+E GK VH+ + ++ + D + LI MY+ CG L S+ VF +K +
Sbjct: 381 ILQACGHLGDLEFGKYVHDYM-ITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCK 439
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN++++ + +N + + + +F + +D +KPD+ T+ ++ + D+ G +
Sbjct: 440 DSVSWNSMINVYIQNGSFDEAMKLFKMMKTD--VKPDSVTYVMLLSMSTQLGDLXLGKEL 497
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII--CGFSENG 280
H AKMG ++ VSN L+ MY KC + + +K+FE M R++++WN+II C SE+
Sbjct: 498 HCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSED- 556
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
C +I M EG PD+ T++++LP
Sbjct: 557 --CNLGLRMISRMR-TEGVTPDMATMLSILP 584
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 109/194 (56%), Gaps = 5/194 (2%)
Query: 118 RVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD-SLKTRNLFQWNALVSGFTK 176
++H L+ + + I + +LI Y+ P S VF + + N++ WN+++ T
Sbjct: 93 KLHSLI-ITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTH 151
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF 236
N L+++ LS++ E + L+PD +TFP VI AC G+ D +H MG D++
Sbjct: 152 NGLFSEALSLYSE-TQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLY 210
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCE 296
+ NALI MY + +++ K+FE MP R++VSWNS+I G++ NG+ E+ ++ +
Sbjct: 211 IGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNL- 269
Query: 297 EGFIPDVITVVTVL 310
G +PD T+ +VL
Sbjct: 270 -GVVPDSYTMSSVL 282
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 110/208 (52%), Gaps = 6/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG +E G +H L+ D I+N L++MY +D RR+FD + R
Sbjct: 281 VLRACGGLGSVEEGDIIHGLIE-KIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLR 339
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN ++ G+++ LY + + +F+E+ + + KPD T +++ACG + D+ FG V
Sbjct: 340 DAVSWNTMICGYSQVGLYEESIKLFMEMVN--QFKPDLLTITSILQACGHLGDLEFGKYV 397
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G D SN LI MY KC + ++F M ++ VSWNS+I + +NG
Sbjct: 398 HDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSF 457
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L KMM + PD +T V +L
Sbjct: 458 DEAMKLF-KMMKTD--VKPDSVTYVMLL 482
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 122/241 (50%), Gaps = 15/241 (6%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVLLQACGHE-KDIEIGKRVH-ELVSASTQFSNDF 133
++ S ++A+ L + + T V+L + + D+ +GK +H +L A F+++
Sbjct: 453 QNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDL--AKMGFNSNI 510
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
+++ L+ MY+ CG DS +VF+++K R++ WN +++ +E L + + ++
Sbjct: 511 VVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTE 570
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+ PD T ++ C +A G +HG K+GL DV V N LI MY KC +
Sbjct: 571 G-VTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRN 629
Query: 254 MVKLFEVMPERNLVSWNSII--CGFSENGFSCESFDLLIKMMGCEE--GFIPDVITVVTV 309
++F++M +++V+W ++I CG G ++ G E G +PD + V +
Sbjct: 630 SFQVFKLMKTKDVVTWTALISACGMYGEGKKA------VRAFGEMEAAGIVPDHVAFVAI 683
Query: 310 L 310
+
Sbjct: 684 I 684
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 118/211 (55%), Gaps = 8/211 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ+C K I+ GK++H V + F D +I T+L+ +Y +C +R +FD +
Sbjct: 81 LLQSCIARKAIKPGKQLHAQVCLAG-FGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKH 139
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+F WN L+ G+ N Y + ++ ++ D L PDNFTFP V+KAC ++ + G +
Sbjct: 140 NIFLWNVLIRGYAWNGPYEAAVQLYYQMF-DYGLVPDNFTFPFVLKACAALSAIEHGREI 198
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN---LVSWNSIICGFSEN 279
H + G DVFV ALI MY KC V ++F+ + R+ +VSWN++I G++ +
Sbjct: 199 HEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAMH 258
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + E+ DL +M + PD IT V VL
Sbjct: 259 GHATEALDLFEEMNRVAK---PDHITFVGVL 286
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 8/121 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC IE G+ +HE V T + D + LI MY+ CG +R VFD + R
Sbjct: 182 VLKACAALSAIEHGREIHEHV-VQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVR 240
Query: 163 N---LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVG 217
+ + WNA+++G+ + T+ L +F E++ KPD+ TF V+ AC GG+ + G
Sbjct: 241 DAVLVVSWNAMITGYAMHGHATEALDLFEEMNRVA--KPDHITFVGVLSACSHGGLLEEG 298
Query: 218 F 218
+
Sbjct: 299 W 299
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 2/120 (1%)
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
+ T L P + ++++C + G +H G D ++ L+ +Y C
Sbjct: 66 AESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDS 125
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ LF+ +P+ N+ WN +I G++ NG + L +M + G +PD T VL
Sbjct: 126 LSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMF--DYGLVPDNFTFPFVL 183
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 136/251 (54%), Gaps = 19/251 (7%)
Query: 75 EESKSLNKALSLLQENLHNAD------------LKE---ATGVLLQACGHEKDIEIGKRV 119
++S S N ++ L++N H D +K G +L+AC + +E G V
Sbjct: 415 KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMV 474
Query: 120 HELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNEL 179
H+ V S S+ F+ +T ++ MY CG +++++ D + + + WNA++SGF+ N+
Sbjct: 475 HDKVIKSGLGSDAFVAST-VVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKE 533
Query: 180 YTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSN 239
+ F E+ D LKPD+FTF V+ C +A + G +HG K ++ D ++S+
Sbjct: 534 SEEAQKFFSEML-DMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISS 592
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
L+ MY KC + + + +FE + +R+ VSWN++ICG++ +G E+ + +M +E
Sbjct: 593 TLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQ--KENV 650
Query: 300 IPDVITVVTVL 310
+P+ T V VL
Sbjct: 651 VPNHATFVAVL 661
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 114/216 (52%), Gaps = 5/216 (2%)
Query: 95 DLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRR 154
D+ +GV AC K G++VH L S F D +N ++ +Y C +++
Sbjct: 350 DVVSLSGVF-SACAETKGYFQGQQVHCLAIKSG-FDVDICVNNAVLDLYGKCKALMEAYL 407
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
+F +K ++ WNA+++ +N Y D + F E+ +KPD+FT+ V+KAC +
Sbjct: 408 IFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLR-FGMKPDDFTYGSVLKACAALR 466
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+ +G VH K GL D FV++ ++ MY KC ++E KL + + + +VSWN+I+
Sbjct: 467 SLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILS 526
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
GFS N S E+ +M+ + G PD T TVL
Sbjct: 527 GFSLNKESEEAQKFFSEML--DMGLKPDHFTFATVL 560
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 87/154 (56%), Gaps = 1/154 (0%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
++T YS G + +FD + ++ WNALVSG+ + ++ + + +FVE++ + P
Sbjct: 89 MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMAR-RGVSP 147
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D TF ++K+C + ++ G VH +A K GL DV +AL+ MYGKC +++ + F
Sbjct: 148 DRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFF 207
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
MPERN VSW + I G +N +L I+M
Sbjct: 208 YGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEM 241
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 101/207 (48%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
++C + G+++H + +FS+D ++ T ++ +Y+ D+RR F L
Sbjct: 257 FRSCAAMSCLNTGRQLHAH-AIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHT 315
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ NA++ G + L + + +F + + ++ D + V AC G VH
Sbjct: 316 VETSNAMMVGLVRAGLGIEAMGLF-QFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVH 374
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+A K G D+ V+NA++ +YGKC + E +F+ M +++ VSWN+II +NG
Sbjct: 375 CLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYD 434
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +M+ G PD T +VL
Sbjct: 435 DTILHFNEML--RFGMKPDDFTYGSVL 459
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 2/193 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
VLL++C +++ +G +VH L + T D + L+ MY C D+ F +
Sbjct: 153 AVLLKSCSALEELSLGVQVHAL-AVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMP 211
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN W A ++G +NE Y L +F+E+ L ++ ++C ++ + G
Sbjct: 212 ERNWVSWGAAIAGCVQNEQYVRGLELFIEMQR-LGLGVSQPSYASAFRSCAAMSCLNTGR 270
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H A K D V A++ +Y K + + + F +P + + N+++ G G
Sbjct: 271 QLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAG 330
Query: 281 FSCESFDLLIKMM 293
E+ L M+
Sbjct: 331 LGIEAMGLFQFMI 343
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
D N ++ Y + V LF+ MP+ ++VSWN+++ G+ + G ES DL ++M
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEM- 140
Query: 294 GCEEGFIPDVITVVTVL 310
G PD T +L
Sbjct: 141 -ARRGVSPDRTTFAVLL 156
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
G + + FVSN L+ MY +CA ++F+ MP R+ VSWN+++ +S G
Sbjct: 47 GFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAG 97
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 119/212 (56%), Gaps = 10/212 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+AC + K ++ GK +H+ V + ND + LI Y C ++ VFD+++
Sbjct: 9 LLRACMNSKSLKQGKLIHQKV-VTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENP 67
Query: 163 -NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+ WN L++G+TKN +Y + L +F +L LKPD++T+P V KACGG+ G
Sbjct: 68 CEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKM 127
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII-CGFSENG 280
+H K GL+ D+ V ++L+ MYGKC E+ + LF MPE+++ WN++I C +
Sbjct: 128 IHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGN 187
Query: 281 F--SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F + E F L+ + GF P+ +T+ T +
Sbjct: 188 FKDALEYFGLMRRF-----GFEPNSVTITTAI 214
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 116/232 (50%), Gaps = 7/232 (3%)
Query: 82 KALSLLQENLHNADLKEATGV---LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
+AL L ++ LH LK + + +ACG +GK +H + T D ++ +
Sbjct: 88 EALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIHTCL-IKTGLMMDIVVGSS 146
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+ MY C + +F+ + +++ WN ++S + ++ + D L F L +P
Sbjct: 147 LVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYF-GLMRRFGFEP 205
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
++ T I +C + D+ G +H G + D F+S+AL+ MYGKC +E +++F
Sbjct: 206 NSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIF 265
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E MP++ +V+WNS+I G+ G L +M EG P + T+ +++
Sbjct: 266 EQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYN--EGVKPTLTTLSSLI 315
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ C + GK VH + + D +N+ L+ +Y CG + ++F +
Sbjct: 314 LIMVCSRSARLLEGKFVHG-YTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKS 372
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN ++SG+ + L +F E+ + ++ D TF V+ AC +A + G +
Sbjct: 373 KVVSWNVMISGYVAEGKLFEALGLFSEMRK-SYVESDAITFTSVLTACSQLAALEKGKEI 431
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + + L + V AL+ MY KC V+E +F+ +P+R+LVSW S+I + +G +
Sbjct: 432 HNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHA 491
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L +M+ + PD + + +L
Sbjct: 492 YGALELFAEML--QSNVKPDRVAFLAIL 517
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 106/208 (50%), Gaps = 6/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ +C D+ G +HE + ++ F D I++ L+ MY CG + +F+ + +
Sbjct: 214 ISSCARLLDLNRGMEIHEEL-INSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKT 272
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN+++SG+ + +F + ++ +KP T +I C A + G VH
Sbjct: 273 VVAWNSMISGYGLKGDIISCIQLFKRMYNEG-VKPTLTTLSSLIMVCSRSARLLEGKFVH 331
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G + + DVFV+++L+ +Y KC VE K+F+++P+ +VSWN +I G+ G
Sbjct: 332 GYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLF 391
Query: 284 ESFDLLIKMMGCEEGFI-PDVITVVTVL 310
E+ L +M + ++ D IT +VL
Sbjct: 392 EALGLFSEM---RKSYVESDAITFTSVL 416
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 5/163 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E GK +H L+ + N+ ++ L+ MY+ CG ++ VF L R
Sbjct: 415 VLTACSQLAALEKGKEIHNLI-IEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKR 473
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGS 220
+L W ++++ + + L +F E+ + +KPD F ++ ACG G+ D G
Sbjct: 474 DLVSWTSMITAYGSHGHAYGALELFAEMLQ-SNVKPDRVAFLAILSACGHAGLVDEG-CY 531
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 263
+ M G+I V + LI + G+ + E ++ + PE
Sbjct: 532 YFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPE 574
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 136/251 (54%), Gaps = 19/251 (7%)
Query: 75 EESKSLNKALSLLQENLHNAD------------LKE---ATGVLLQACGHEKDIEIGKRV 119
++S S N ++ L++N H D +K G +L+AC + +E G V
Sbjct: 415 KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMV 474
Query: 120 HELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNEL 179
H+ V S S+ F+ +T ++ MY CG +++++ D + + + WNA++SGF+ N+
Sbjct: 475 HDKVIKSGLGSDAFVAST-VVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKE 533
Query: 180 YTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSN 239
+ F E+ D LKPD+FTF V+ C +A + G +HG K ++ D ++S+
Sbjct: 534 SEEAQKFFSEML-DMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISS 592
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
L+ MY KC + + + +FE + +R+ VSWN++ICG++ +G E+ + +M +E
Sbjct: 593 TLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQ--KENV 650
Query: 300 IPDVITVVTVL 310
+P+ T V VL
Sbjct: 651 VPNHATFVAVL 661
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 115/216 (53%), Gaps = 5/216 (2%)
Query: 95 DLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRR 154
D+ +GV AC K G++VH L + + F D +N ++ +Y C +++
Sbjct: 350 DVVSLSGVF-SACAETKGYFQGQQVHCL-AIKSGFDVDICVNNAVLDLYGKCKALMEAYL 407
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
+F +K ++ WNA+++ +N Y D + F E+ +KPD+FT+ V+KAC +
Sbjct: 408 IFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLR-FGMKPDDFTYGSVLKACAALR 466
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+ +G VH K GL D FV++ ++ MY KC ++E KL + + + +VSWN+I+
Sbjct: 467 SLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILS 526
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
GFS N S E+ +M+ + G PD T TVL
Sbjct: 527 GFSLNKESEEAQKFFSEML--DMGLKPDHFTFATVL 560
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 87/154 (56%), Gaps = 1/154 (0%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
++T YS G + +FD + ++ WNALVSG+ + ++ + + +FVE++ + P
Sbjct: 89 MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMAR-RGVSP 147
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D TF ++K+C + ++ G VH +A K GL DV +AL+ MYGKC +++ + F
Sbjct: 148 DRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFF 207
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
MPERN VSW + I G +N +L I+M
Sbjct: 208 YGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEM 241
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 101/207 (48%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
++C + G+++H + +FS+D ++ T ++ +Y+ D+RR F L
Sbjct: 257 FRSCAAMSCLNTGRQLHAH-AIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHT 315
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ NA++ G + L + + +F + + ++ D + V AC G VH
Sbjct: 316 VETSNAMMVGLVRAGLGIEAMGLF-QFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVH 374
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+A K G D+ V+NA++ +YGKC + E +F+ M +++ VSWN+II +NG
Sbjct: 375 CLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYD 434
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +M+ G PD T +VL
Sbjct: 435 DTILHFNEML--RFGMKPDDFTYGSVL 459
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 2/193 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
VLL++C +++ +G +VH L + T D + L+ MY C D+ F +
Sbjct: 153 AVLLKSCSALEELSLGVQVHAL-AVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMP 211
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN W A ++G +NE Y L +F+E+ L ++ ++C ++ + G
Sbjct: 212 ERNWVSWGAAIAGCVQNEQYVRGLELFIEMQR-LGLGVSQPSYASAFRSCAAMSCLNTGR 270
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H A K D V A++ +Y K + + + F +P + + N+++ G G
Sbjct: 271 QLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAG 330
Query: 281 FSCESFDLLIKMM 293
E+ L M+
Sbjct: 331 LGIEAMGLFQFMI 343
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
D N ++ Y + V LF+ MP+ ++VSWN+++ G+ + G ES DL ++M
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEM- 140
Query: 294 GCEEGFIPDVITVVTVL 310
G PD T +L
Sbjct: 141 -ARRGVSPDRTTFAVLL 156
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
G + FVSN L+ MY +CA ++F+ MP R+ VSWN+++ +S G
Sbjct: 47 GFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAG 97
>gi|302798965|ref|XP_002981242.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
gi|300151296|gb|EFJ17943.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
Length = 734
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 107/183 (58%), Gaps = 1/183 (0%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC D+E G+ +H+ V S ++D ++ L+TMY+ CG L+ ++FD++ +N
Sbjct: 119 LAACAGLGDLEQGREIHKRVLESPSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKN 178
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L WNA++S F + + L ++ + + L+P+ F F ++ AC + ++ GS +H
Sbjct: 179 LVSWNAMISAFVQCDYPEQALELYHRMKRE-RLEPNGFVFASLLTACASLGNLELGSSIH 237
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+GL D+ + NALI MY KC ++E +++F + R++ +W S+I G+++ GF
Sbjct: 238 QRITSLGLQRDIVMENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGS 297
Query: 284 ESF 286
E+F
Sbjct: 298 EAF 300
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 106/191 (55%), Gaps = 6/191 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ C +++ G+R+H+ + S + + + ++ MY+ CG D++ FD + +
Sbjct: 20 LLQECCSRRNVSEGRRLHDDLRRSG-YGDSSYLRRCVVQMYAKCGCLADAKAAFDEIADK 78
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N F WN ++SG+ ++ + L +F ++ ++ P+ F F + AC G+ D+ G +
Sbjct: 79 NDFVWNLMISGYARSGKNREALELFHKM----DIPPNGFIFASALAACAGLGDLEQGREI 134
Query: 223 HGMAAKMGLIG-DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
H + I DV V N+L+ MY +C V E +K+F+ MP +NLVSWN++I F + +
Sbjct: 135 HKRVLESPSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQCDY 194
Query: 282 SCESFDLLIKM 292
++ +L +M
Sbjct: 195 PEQALELYHRM 205
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 113/209 (54%), Gaps = 10/209 (4%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
LQAC ++D + K + EL+ S D I L++ YS CG ++R++FD +++R+
Sbjct: 420 LQACSLKRDSRLSKTIRELIDWSGIDKMD-SIRADLVSAYSKCGDMEEARKIFDRMESRD 478
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W ++ G+ + L +F + + ++PD+ TF V++AC + D G VH
Sbjct: 479 VLTWTVMIKGYAQQGDSKAALELFHRMKPEG-VEPDSVTFSSVLQACSNLED---GREVH 534
Query: 224 G--MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+AA+ G + D F+ N LI MY +C + + ++FE M + +SW++I+ + +G
Sbjct: 535 ARILAAQGGKMSD-FLGNGLINMYARCGSMRDARQIFESMDRSSRISWSAIMTLCARHGQ 593
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ D M+ EG +PD +T++ +L
Sbjct: 594 HDDIIDTYRLMVN--EGVVPDGVTLIAIL 620
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 96/191 (50%), Gaps = 5/191 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC ++E+G +H+ ++ S D ++ LI MYS CG ++ VF L TR
Sbjct: 220 LLTACASLGNLELGSSIHQRIT-SLGLQRDIVMENALINMYSKCGCMDEALEVFSGLATR 278
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++F W ++++G+ + ++ + + + D + P + TF ++ AC + G +
Sbjct: 279 DVFTWTSMIAGYAQLGFGSEAFAFYDGMRRDC-VSPTSATFVALLSACSTLEQ---GKHL 334
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G V AL+ MY +C +E+ LF M +++ VSW++++ ++ G
Sbjct: 335 HEEVKAFGFESITVVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDP 394
Query: 283 CESFDLLIKMM 293
++ L +M+
Sbjct: 395 GKALTLFRQMI 405
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 7/209 (3%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL AC +E GK +HE V A F + ++ T L+ MYS CG D+ +F ++
Sbjct: 320 ALLSAC---STLEQGKHLHEEVKA-FGFESITVVETALMFMYSRCGSLEDAEFLFAKMQQ 375
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ W+A+V+ + L++F ++ + ++ TF ++AC D
Sbjct: 376 KDYVSWSAMVTSHAQFGDPGKALTLFRQMILEG-MQLSLPTFCSALQACSLKRDSRLSKT 434
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+ + G+ + L++ Y KC +EE K+F+ M R++++W +I G+++ G
Sbjct: 435 IRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFDRMESRDVLTWTVMIKGYAQQGD 494
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S + +L +M EG PD +T +VL
Sbjct: 495 SKAALELFHRMK--PEGVEPDSVTFSSVL 521
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+LQAC ++E G+ VH +++A +DF+ N LI MY+ CG D+R++F+S+
Sbjct: 520 VLQAC---SNLEDGREVHARILAAQGGKMSDFLGNG-LINMYARCGSMRDARQIFESMDR 575
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIAD 215
+ W+A+++ ++ + D++ + L + + PD T ++ +C G+ D
Sbjct: 576 SSRISWSAIMTLCARHGQHDDIIDTY-RLMVNEGVVPDGVTLIAILNSCSHAGLTD 630
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 191 SSDTELKPDNFT-FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
SS LK + + +++ C +V G +H + G ++ ++ MY KC
Sbjct: 4 SSGAALKESEVSRYARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCG 63
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI 300
+ + F+ + ++N WN +I G++ +G + E+ +L KM GFI
Sbjct: 64 CLADAKAAFDEIADKNDFVWNLMISGYARSGKNREALELFHKMDIPPNGFI 114
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 131/243 (53%), Gaps = 6/243 (2%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNA-DLKEAT-GVLLQACGHEKDIEIGKRVHELVSAST 127
I T CE+++S K LS L + + E T G +L+AC ++ G VH + S
Sbjct: 431 IITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSG 490
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
F+ + L+ MYS CG ++ ++ L+ + + WNA++SGF+ + D F
Sbjct: 491 MGLKMFV-GSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFF 549
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+ + ++PDNFT+ V+ C +A VG G +H K+ L+ DV++++ L+ MY K
Sbjct: 550 SHML-EMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSK 608
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
C + + + +F P+R+ V+WN++ICGF+ +G E+ +L M+ E P+ T V
Sbjct: 609 CGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHML--HENIKPNHATFV 666
Query: 308 TVL 310
+VL
Sbjct: 667 SVL 669
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 117/227 (51%), Gaps = 11/227 (4%)
Query: 87 LQENLHNADLKEATGVLLQAC---GHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMY 143
LQ+N + D +G L A GH + G ++H L S SN + N ++ MY
Sbjct: 350 LQKNSFSFDEVSLSGALSAAAVIKGHSE----GLQLHGLAIKSNLSSNICVANA-ILDMY 404
Query: 144 SLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTF 203
CG +++ +FD ++ R+ WNA+++ +NE LS F + ++++PD FT+
Sbjct: 405 GKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLR-SKMEPDEFTY 463
Query: 204 PCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 263
V+KAC G G VHG K G+ +FV +AL+ MY KC +EE K+ + E
Sbjct: 464 GSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEE 523
Query: 264 RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +VSWN+II GFS S +S M+ E G PD T TVL
Sbjct: 524 QTMVSWNAIISGFSLQKKSEDSQRFFSHML--EMGVEPDNFTYATVL 568
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 97/192 (50%), Gaps = 2/192 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
V L+ C +D +G ++H ++ F D + + L+ MY+ C DS VF L
Sbjct: 161 AVSLKICSLLEDQVLGIQIHG-IAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELP 219
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+N W+A ++G +N+ L +F E+ + T+ V ++C G++ G+
Sbjct: 220 DKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKG-IGVSQSTYASVFRSCAGLSASRLGT 278
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H A K DV V A + MY KC + + KLF ++P+ NL S+N++I G++ N
Sbjct: 279 QLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNE 338
Query: 281 FSCESFDLLIKM 292
++F L +++
Sbjct: 339 QGFQAFKLFLQL 350
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 4/208 (1%)
Query: 74 CEESKSLNKALSLLQENLHNA-DLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSN 131
C ++ L + L L +E + ++T + ++C +G ++H + T F +
Sbjct: 233 CVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLH-CHALKTDFGS 291
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I+ T + MY+ C D+ ++F L NL +NA++ G+ +NE +F++L
Sbjct: 292 DVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQ 351
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
++ D + + A I G +HG+A K L ++ V+NA++ MYGKC +
Sbjct: 352 KNS-FSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGAL 410
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSEN 279
E LF+ M R+ VSWN+II +N
Sbjct: 411 VEASGLFDEMEIRDPVSWNAIITACEQN 438
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 34/209 (16%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ Q C + + ++ GK H + S F+ N LI MY C + +VF+ + R
Sbjct: 30 IFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNC-LIQMYVKCCALEYAYKVFEEMPQR 88
Query: 163 NLFQWN--------------------------------ALVSGFTKNELYTDVLSIFVEL 190
++ WN +L+SG+ +N +++F+++
Sbjct: 89 DIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKM 148
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
D + D+ T +K C + D G +HG+A +MG DV +AL+ MY KC
Sbjct: 149 R-DLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNS 207
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+E+ + +F +P++N +SW++ I G +N
Sbjct: 208 LEDSLDVFSELPDKNWISWSAAIAGCVQN 236
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 6/183 (3%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L C + + +GK++H + + +D I + L+ MYS CG DS +F
Sbjct: 565 ATVLDTCANLATVGLGKQIHAQM-IKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAP 623
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R+ WNA++ GF + L + L +F + + +KP++ TF V++AC + + G
Sbjct: 624 KRDSVTWNAMICGFAYHGLGEEALELFEHMLHEN-IKPNHATFVSVLRACSHVGNAKKGL 682
Query: 221 -GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSI--ICGF 276
MA+ L + + ++ + G+ VEE ++L + MP E + + W ++ IC
Sbjct: 683 FYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKI 742
Query: 277 SEN 279
N
Sbjct: 743 QGN 745
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
TF + + C + G H G VFV+N LI MY KC +E K+FE M
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 262 PERNLVSWNSIICGFSENG 280
P+R++VSWN+++ G + G
Sbjct: 86 PQRDIVSWNTMVFGCAGAG 104
>gi|168008904|ref|XP_001757146.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691644|gb|EDQ78005.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 118/208 (56%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQ C KD+ K+VH+ + S N ++ N +L+ +Y CG D+R VFD L +
Sbjct: 5 VLQRCFKHKDLTSVKQVHDCILKSGMDQNPYVAN-KLMRVYIRCGKVQDARHVFDKLVKK 63
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+F W ++ G+ ++ D + ++ ++ + +P+ T+ ++KAC + +G +
Sbjct: 64 NVFNWTTMIGGYAEHGRPADAIEVYNQMRQEGG-RPNEVTYLSILKACACPVGLKWGKEI 122
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G DV V AL+ MY K +++ +F+ M ERN+++WN +I G +++GF
Sbjct: 123 HAHISHGGFRSDVPVQTALVNMYAKSGSIKDARLVFDEMAERNVITWNVMIGGLAQHGFG 182
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F L ++M EEGF+PD T +++L
Sbjct: 183 QEAFSLFLQMQ--EEGFVPDSTTYLSIL 208
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 117/210 (55%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC ++ GK +H +S F +D + T L+ MY+ G D+R VFD + R
Sbjct: 106 ILKACACPVGLKWGKEIHAHISHGG-FRSDVPVQTALVNMYAKSGSIKDARLVFDEMAER 164
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKA--CGGIADVGFGS 220
N+ WN ++ G ++ + S+F+++ + PD+ T+ ++ A C +G+
Sbjct: 165 NVITWNVMIGGLAQHGFGQEAFSLFLQMQEEG-FVPDSTTYLSILTATACSSAGALGWVK 223
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH A K G D+ V NAL+ +Y K V++ +FE M +R+++SW+++I G ++NG
Sbjct: 224 EVHRHAVKAGFDSDMRVCNALVHVYSKSGSVDDARLVFEGMLDRDVISWSAMIGGLAQNG 283
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F L +KM EG IP+V T V++L
Sbjct: 284 CGHEAFSLFLKMQ--REGVIPNVTTYVSIL 311
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 109/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L A +E K+VH + +DF + L+ MY+ G D+R VFD + R
Sbjct: 310 ILTASASAGALEWVKQVHNHARKAG-LGSDFRVCNALVHMYAKSGSIDDARLVFDQMSVR 368
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+F WNA++ G ++ + S+F+ + + + PD T+ ++ A +G+ V
Sbjct: 369 NVFTWNAMIGGLAQHGCGQEAFSLFLRMRREG-VVPDAITYMSILNASASTGALGWVKEV 427
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A + GL DV V NAL+ MY K + + +F+ M ER++++W ++I G ++N
Sbjct: 428 HRQAVQAGLDSDVRVGNALVHMYCKTGSISDARLMFDGMVERDVITWTAMISGLAQNECG 487
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F L ++M EGFIP T ++L
Sbjct: 488 QEAFSLFLQMQ--REGFIPVATTYASIL 513
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 107/205 (52%), Gaps = 4/205 (1%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC + K VH + F +D + L+ +YS G D+R VF+ + R++
Sbjct: 212 ACSSAGALGWVKEVHRH-AVKAGFDSDMRVCNALVHVYSKSGSVDDARLVFEGMLDRDVI 270
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
W+A++ G +N + S+F+++ + + P+ T+ ++ A + + VH
Sbjct: 271 SWSAMIGGLAQNGCGHEAFSLFLKMQREGVI-PNVTTYVSILTASASAGALEWVKQVHNH 329
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
A K GL D V NAL+ MY K +++ +F+ M RN+ +WN++I G +++G E+
Sbjct: 330 ARKAGLGSDFRVCNALVHMYAKSGSIDDARLVFDQMSVRNVFTWNAMIGGLAQHGCGQEA 389
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
F L ++M EG +PD IT +++L
Sbjct: 390 FSLFLRMR--REGVVPDAITYMSIL 412
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 114/205 (55%), Gaps = 6/205 (2%)
Query: 107 CGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
C +D+++G RVH L+ F D + + LI MY CG L++R VFD L+ RN+
Sbjct: 231 CAQIRDLQLGLRVHARLLRGGLMF--DEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVV 288
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
W AL++ + +N + + L++F + + L P+ +TF ++ AC GIA + G +H
Sbjct: 289 VWTALMTAYLQNGYFEESLNLFTCMDREGTL-PNEYTFAVLLNACAGIAALRHGDLLHAR 347
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
K+G V V NALI MY K ++ +F M R++++WN++ICG+S +G ++
Sbjct: 348 VEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQA 407
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
+ M+ EE P+ +T + VL
Sbjct: 408 LQVFQDMVSAEE--CPNYVTFIGVL 430
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 7/209 (3%)
Query: 107 CGHEKDIEIGKRVHELVSASTQFSNDFIIN--TRLITMYSLCGFPLDSRRVFDSLKTRNL 164
C K + GK +H Q SN I+ L+ +Y CG +R +FD++ RN+
Sbjct: 22 CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNV 81
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
WN L++G+ + +VL +F + S P+ + F + AC V G HG
Sbjct: 82 VSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHG 141
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER---NLVSWNSIICGFSENGF 281
+ K GL+ +V +AL+ MY +C+ VE +++ + +P ++ S+NS++ E+G
Sbjct: 142 LLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGR 201
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ ++L +M+ +E D +T V V+
Sbjct: 202 GEEAVEVLRRMV--DECVAWDHVTYVGVM 228
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 103/210 (49%), Gaps = 7/210 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL---K 160
L AC H ++ G + H L+ + ++ + L+ MYS C + +V D++
Sbjct: 124 LSACSHGGRVKEGMQCHGLLFKFGLVCHQYV-KSALVHMYSRCSHVELALQVLDTVPGEH 182
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
++F +N++++ ++ + + + + D + D+ T+ V+ C I D+ G
Sbjct: 183 VNDIFSYNSVLNALVESGRGEEAVEVLRRMV-DECVAWDHVTYVGVMGLCAQIRDLQLGL 241
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH + GL+ D FV + LI MYGKC V +F+ + RN+V W +++ + +NG
Sbjct: 242 RVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNG 301
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ES +L M EG +P+ T +L
Sbjct: 302 YFEESLNLFTCMD--REGTLPNEYTFAVLL 329
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 118/209 (56%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++ACG + +G+ VH+ + F D + + LI YS G D+R +FD + ++
Sbjct: 153 VIKACGGLNSVALGRVVHDKIQF-MGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSK 211
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN +++G+ KN + + +F+E+ TE P++ TF CV+ C + FGS +
Sbjct: 212 DGVLWNVMLNGYVKNGDWDNATGVFMEMRR-TETNPNSVTFACVLSVCASEIMINFGSQL 270
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ GL D V+N L+AMY KC + + +LF++MP+ +LV+WN +I G+ +NGF
Sbjct: 271 HGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFM 330
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ L +M+ PD IT + LP
Sbjct: 331 DEASCLFHEMISAR--MKPDSITFSSFLP 357
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 113/225 (50%), Gaps = 5/225 (2%)
Query: 87 LQENLHNAD-LKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSL 145
LQ ++HN D L +LQ C + G++ H + + N I+ T+L+ MY L
Sbjct: 35 LQFSIHNDDSLAPQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNG-ILGTKLLGMYVL 93
Query: 146 CGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPC 205
CG LD++ +F L+ WN ++ GFT + L + ++ L PD +TFP
Sbjct: 94 CGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTL-PDKYTFPY 152
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
VIKACGG+ V G VH MG DVFV ++LI Y + + + LF+ MP ++
Sbjct: 153 VIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKD 212
Query: 266 LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
V WN ++ G+ +NG + + ++M E P+ +T VL
Sbjct: 213 GVLWNVMLNGYVKNGDWDNATGVFMEMRRTETN--PNSVTFACVL 255
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 118/244 (48%), Gaps = 22/244 (9%)
Query: 86 LLQENLHNADLKEATGV------------------LLQACGHEKDIEIGKRVHELVSAST 127
+L + N D ATGV +L C E I G ++H LV +S
Sbjct: 219 MLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSG 278
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
+ + NT L+ MY+ CG D+RR+FD + +L WN ++SG+ +N + +F
Sbjct: 279 LEMDSPVANT-LLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLF 337
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
E+ S +KPD+ TF + A + G +H + G+ DVF+ +ALI +Y K
Sbjct: 338 HEMIS-ARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFK 396
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
C VE K+F+ ++V ++I G+ NG + + ++ ++ +E + +T+
Sbjct: 397 CRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLL--QERMRANSVTLA 454
Query: 308 TVLP 311
+VLP
Sbjct: 455 SVLP 458
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 112/225 (49%), Gaps = 6/225 (2%)
Query: 86 LLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSL 145
LLQE + + A+ +L AC + +GK +H + + + ++ + ++ MY+
Sbjct: 441 LLQERMRANSVTLAS--VLPACAGLAALTLGKELHGHILKNGHGGSCYV-GSAIMDMYAK 497
Query: 146 CGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPC 205
CG + + F + ++ WN++++ ++N + + +F ++ K D +
Sbjct: 498 CGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGM-AGTKYDCVSISA 556
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
+ AC + + +G +H + D+F +ALI MY KC ++ ++F+ M E+N
Sbjct: 557 ALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKN 616
Query: 266 LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
VSWNSII + +G +S +L M+G +G PD +T + ++
Sbjct: 617 EVSWNSIIAAYGNHGRLKDSLNLFHGMLG--DGIQPDHVTFLAII 659
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 80/162 (49%), Gaps = 7/162 (4%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + + GK +H + F +D + LI MYS CG + RVFD+++ +N
Sbjct: 558 LSACANLPALHYGKEIHAFMMRGA-FRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKN 616
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WN++++ + + D L++F + D ++PD+ TF +I ACG V G+H
Sbjct: 617 EVSWNSIIAAYGNHGRLKDSLNLFHGMLGDG-IQPDHVTFLAIISACGHAGQV--DEGIH 673
Query: 224 G---MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
M ++G++ + ++ ++G+ + E + MP
Sbjct: 674 YFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMP 715
>gi|225459405|ref|XP_002284293.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Vitis vinifera]
Length = 595
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 128/243 (52%), Gaps = 6/243 (2%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSAST 127
+ T C + +ALS+ + + N V +L+ACG EK +E GK++H +
Sbjct: 235 MITACSQQGRGTEALSMFSQMMFNTSSPNEFTVCSVLKACGEEKALEFGKQLHGAI-IKK 293
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
F D I T L+ MY+ CG LDSR+VFD +K RN W ++++G+ +N + +S+F
Sbjct: 294 MFKEDVFIGTSLVGMYAKCGEILDSRKVFDGMKKRNTVTWTSIIAGYARNGQGEEAISLF 353
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+ ++ +N T +++ACG ++ G VH K + ++++ + L+ Y K
Sbjct: 354 -RVMKRRKIFANNLTVVSILRACGSTRNLLMGKEVHAQIMKNSMQSNIYIGSTLVWFYCK 412
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
C K+ + MP R++VSW +II G++ G E+ + L +M+ EEG P+ T
Sbjct: 413 CEEHPFASKVLQNMPLRDVVSWTAIISGYTSLGHEPEALEFLKEML--EEGVEPNPFTYS 470
Query: 308 TVL 310
+ L
Sbjct: 471 SAL 473
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG +++ +GK VH + ++ SN +I +T L+ Y C + +V ++ R
Sbjct: 371 ILRACGSTRNLLMGKEVHAQIMKNSMQSNIYIGST-LVWFYCKCEEHPFASKVLQNMPLR 429
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W A++SG+T + L E+ + ++P+ FT+ +KAC + + G +
Sbjct: 430 DVVSWTAIISGYTSLGHEPEALEFLKEMLEEG-VEPNPFTYSSALKACAHLEAILQGKLI 488
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K + +VFV +ALI MY KC +V E +++F+ MP+RNLVSW ++I G++ NG
Sbjct: 489 HSSVNKTLALSNVFVGSALINMYAKCGYVSEAIQVFDSMPQRNLVSWKAMIVGYARNGLC 548
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L+ +M EG D + TVL
Sbjct: 549 GEALKLMYRMQA--EGIEVDDYILTTVL 574
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 107/208 (51%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C D E+G+++H + + I+++ L+ Y+ CG + FD + R
Sbjct: 170 VLNLCSKRLDFELGRQIHACIVKDNW--RNLIVDSALVCFYAQCGDLSGAFHAFDQMPER 227
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +++ ++ T+ LS+F ++ +T P+ FT V+KACG + FG +
Sbjct: 228 DVVCWTTMITACSQQGRGTEALSMFSQMMFNTS-SPNEFTVCSVLKACGEEKALEFGKQL 286
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K DVF+ +L+ MY KC + + K+F+ M +RN V+W SII G++ NG
Sbjct: 287 HGAIIKKMFKEDVFIGTSLVGMYAKCGEILDSRKVFDGMKKRNTVTWTSIIAGYARNGQG 346
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M + +TVV++L
Sbjct: 347 EEAISLFRVMK--RRKIFANNLTVVSIL 372
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
LQ+C +++ +RVH +V S ++ N LI+ YS G +++R+VFD + RN
Sbjct: 73 LQSCCTVREV---RRVHAVVFKCLDNSVTYV-NNNLISAYSRFGKLVEARKVFDKMPERN 128
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W A+V+G+++ + L +F + + ++ + TF CV+ C D G +H
Sbjct: 129 VVSWTAVVNGYSRYGFDDEALRLFDD-CIENGVRANGKTFVCVLNLCSKRLDFELGRQIH 187
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
K ++ V +AL+ Y +C + F+ MPER++V W ++I S+ G
Sbjct: 188 ACIVKDNW-RNLIVDSALVCFYAQCGDLSGAFHAFDQMPERDVVCWTTMITACSQQGRGT 246
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + +MM P+ TV +VL
Sbjct: 247 EALSMFSQMMFNTSS--PNEFTVCSVL 271
>gi|449440359|ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Cucumis sativus]
Length = 595
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 123/215 (57%), Gaps = 5/215 (2%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A G L+Q C +GK++H + S+ ++F+ ++LI+ YS G D+ VF
Sbjct: 5 AYGRLIQHCTDHLFFRVGKQLHARLVLSSVVPDNFL-GSKLISFYSKSGSIRDAYNVFGK 63
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVEL--SSDTELKPDNFTFPCVIKACGGI-AD 215
+ +N+F WNAL+ +T + ++TD+L +F L S+ T++KPD FT C +KA + ++
Sbjct: 64 IPRKNIFSWNALLISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKALASLFSN 123
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
G VH + GL D+FV NALI Y +C + +F+ MPER++VSWN+++ G
Sbjct: 124 SGLAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDIVSWNAMLAG 183
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+S+ G S E L ++M P+ +T V+VL
Sbjct: 184 YSQGG-SYEKCKELFRVMLSSLEVKPNALTAVSVL 217
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 96/175 (54%), Gaps = 1/175 (0%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
+ K VH + + F++N LIT YS C + +R +FD + R++ WNA+++G+
Sbjct: 126 LAKEVHSFILRRGLEYDIFVVNA-LITFYSRCDELVLARIMFDRMPERDIVSWNAMLAGY 184
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
++ Y +F + S E+KP+ T V++AC D+ FG VH + + D
Sbjct: 185 SQGGSYEKCKELFRVMLSSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQIKMD 244
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL 289
V + NA+I +Y KC ++ +LFE M E++ +++ S+I G+ +GF ++ DL
Sbjct: 245 VSLWNAVIGLYAKCGSLDYARELFEEMLEKDAITYCSMISGYMVHGFVNQAMDLF 299
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 35/239 (14%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL--- 159
+LQAC D+ G VH V+ S Q D + +I +Y+ CG +R +F+ +
Sbjct: 216 VLQACAQSNDLIFGIEVHRFVNES-QIKMDVSLWNAVIGLYAKCGSLDYARELFEEMLEK 274
Query: 160 -------------------KTRNLFQ---------WNALVSGFTKNELYTDVLSIFVELS 191
+ +LF+ WNA++SG +N + IF +
Sbjct: 275 DAITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQ 334
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
S +P+ T ++ + + G +HG A + +++V+ A+I Y KC ++
Sbjct: 335 SHG-CRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIYVATAIIDSYAKCGYL 393
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ + R+L++W SII ++ +G + + L +M+ G PD +T +VL
Sbjct: 394 HGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEML--TNGIQPDQVTFTSVL 450
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L H ++ GK +H +T + + + T +I Y+ CG+ ++ VFD +K R
Sbjct: 348 ILPVFSHFSTLKGGKEIHGYAIRNT-YDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGR 406
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+L W +++S + + LS+F E+ ++ ++PD TF V+ AC
Sbjct: 407 SLIAWTSIISAYAVHGDANVALSLFYEMLTNG-IQPDQVTFTSVLAACA 454
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 123/211 (58%), Gaps = 4/211 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G+L +A DI+ K++H ++ N + +L+ Y+ CG P +R+VFD +
Sbjct: 22 GLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSL-GIKLMRSYAACGEPGLTRKVFDEMS 80
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN+ +N ++ + N Y D L +F E+ + +PDN+T+PCV+KAC ++ +G
Sbjct: 81 DRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGG-FRPDNYTYPCVLKACSCSENLRYGL 139
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG K+GL ++FV N LIAMYGKC + E ++F+ M +++VSWNS++ G++ N
Sbjct: 140 LIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNM 199
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ ++ +M + G PD T+ +++P
Sbjct: 200 RFDDALEICREME--DYGQKPDGCTMASLMP 228
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 85/157 (54%), Gaps = 3/157 (1%)
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
++F +L+ +NL WN ++ + KN L T + +++++ ++PD TF V+ ACG +
Sbjct: 243 KIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEK-CRVEPDAITFASVLPACGDL 301
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
+ + G +H K L ++ + N+LI MY +C +++ ++F+ M R++ SW S+I
Sbjct: 302 SALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLI 361
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ G C + L +M+ G PD I V +L
Sbjct: 362 SAYGMTGQGCNAVALFTEMLN--SGQAPDSIAFVAIL 396
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG + +G+R+HE V + + ++ LI MY+ CG D++RVFD +K R
Sbjct: 294 VLPACGDLSALLLGRRIHEYVE-KKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFR 352
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
++ W +L+S + + +++F E+ + + PD+ F ++ AC G+ D G
Sbjct: 353 DVASWTSLISAYGMTGQGCNAVALFTEMLNSGQ-APDSIAFVAILSACSHSGLLDEG-RI 410
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
M + + L+ + G+ V+E + + MP E N W +++
Sbjct: 411 YFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLL 464
>gi|357138657|ref|XP_003570906.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Brachypodium distachyon]
Length = 608
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 118/211 (55%), Gaps = 3/211 (1%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
V+L AC D+ +G+ + E V S + ++ + L+ MY CG ++RRVFD +
Sbjct: 221 VAVVLAACRDAGDLVLGRWLEEWVR-SAEIEVGSLVGSALVGMYEKCGEMTEARRVFDGI 279
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+++ WNA+++G+ +N + + +++F + + PD T V+ AC + + G
Sbjct: 280 AHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQEGA-SPDKITLVGVLSACAAVGALELG 338
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+ + A+ GL G+V+V AL+ MY KC +++ V++F +P +N +WN++ICG + N
Sbjct: 339 TELDAYASHRGLYGNVYVGTALVDMYSKCGDLDKAVQVFGKLPCKNEATWNALICGLAFN 398
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ ++M EEG PD IT + VL
Sbjct: 399 GRGHEAIRQF-EVMRNEEGLRPDDITFIGVL 428
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 109/208 (52%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL A + + H L+ ++D +++ L+TMYS G PL +RRVFD + R
Sbjct: 122 LLLAAARAPEPPFARSAHALLCRLGLQAHDHTVHS-LVTMYSNLGDPLAARRVFDGIPRR 180
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA++ + + + DV +F ++ + + P+ T V+ AC D+ G +
Sbjct: 181 DVVSWNAMMKAYERAGMAADVARMFRDMIDEGAVAPNEVTVAVVLAACRDAGDLVLGRWL 240
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ V +AL+ MY KC + E ++F+ + +++V+WN++I G+++NG S
Sbjct: 241 EEWVRSAEIEVGSLVGSALVGMYEKCGEMTEARRVFDGIAHKDVVAWNAMITGYAQNGMS 300
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M +EG PD IT+V VL
Sbjct: 301 KEAIALFHSMR--QEGASPDKITLVGVL 326
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 5/147 (3%)
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
F +N + F T L +F+ + L+PD +T P ++ A + F H
Sbjct: 83 FSYNVTLRFFASTRPRT-ALRLFLRMLR-AALRPDAYTLPFLLLAAARAPEPPFARSAHA 140
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCE 284
+ ++GL ++L+ MY ++F+ +P R++VSWN+++ + G + +
Sbjct: 141 LLCRLGLQAHDHTVHSLVTMYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYERAGMAAD 200
Query: 285 SFDLLIKMMGCEEGFI-PDVITVVTVL 310
+ M+ +EG + P+ +TV VL
Sbjct: 201 VARMFRDMI--DEGAVAPNEVTVAVVL 225
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E+G + S + N ++ T L+ MYS CG + +VF L +
Sbjct: 325 VLSACAAVGALELGTELDAYASHRGLYGNVYV-GTALVDMYSKCGDLDKAVQVFGKLPCK 383
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
N WNAL+ G N + + F + ++ L+PD+ TF V+ AC
Sbjct: 384 NEATWNALICGLAFNGRGHEAIRQFEVMRNEEGLRPDDITFIGVLSAC 431
>gi|255591025|ref|XP_002535423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223523164|gb|EEF26960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 563
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 117/208 (56%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC D EIG V V F D I L+ MY+ G + +R VF+ + R
Sbjct: 39 VINACAALGDFEIGNVVQNHV-LEIGFGFDLYIGNALVDMYARFGDLVKARNVFEEMTHR 97
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+L+SG++ N + + L I+ EL LKPDNFT V+ ACGG+ V G +
Sbjct: 98 DIVSWNSLISGYSANGYWDEALEIYYELRI-AGLKPDNFTLSSVLPACGGLLAVKEGEVI 156
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ K+G+ DV +SN L++MY K + + ++F M ++ VSWN++ICG+ +
Sbjct: 157 HGLVEKLGMNIDVIMSNGLLSMYFKFGRLMDAQRVFNKMVVKDYVSWNTLICGYCQMELF 216
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
ES L +M+ + F PD++T+ +VL
Sbjct: 217 EESIQLFREMV---KRFRPDLLTITSVL 241
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 126/218 (57%), Gaps = 8/218 (3%)
Query: 95 DLKEATGVLLQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSR 153
DL T VL +ACG +D+E GK VH+ ++ + +F D + +I Y+ CG L SR
Sbjct: 233 DLLTITSVL-RACGLLRDLEFGKFVHDYILRSGIEF--DVTASNIVIDTYAKCGDLLASR 289
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
+ FD +K R+ WN L++G+ ++ Y + + +F ++ D LKPD+ TF ++ +
Sbjct: 290 KAFDRIKCRDSVSWNTLINGYIQSRSYGEGVKLFKKMKMD--LKPDSITFVTLLSISTRL 347
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
AD G +H AK+G D+ VSNAL+ MY KC V++ +K+FE M R++V+WN+II
Sbjct: 348 ADTELGKEIHCDLAKLGFDSDLVVSNALVDMYSKCGNVKDSLKVFENMKVRDIVTWNTII 407
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ +F ++ +M E IPD+ T++ +LP
Sbjct: 408 AACVQAEDCTLAFRMISQMR--NEELIPDMGTLLGILP 443
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 111/208 (53%), Gaps = 6/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG ++ G+ +H LV + D I++ L++MY G +D++RVF+ + +
Sbjct: 140 VLPACGGLLAVKEGEVIHGLVE-KLGMNIDVIMSNGLLSMYFKFGRLMDAQRVFNKMVVK 198
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN L+ G+ + EL+ + + +F E+ +PD T V++ACG + D+ FG V
Sbjct: 199 DYVSWNTLICGYCQMELFEESIQLFREMVK--RFRPDLLTITSVLRACGLLRDLEFGKFV 256
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G+ DV SN +I Y KC + K F+ + R+ VSWN++I G+ ++
Sbjct: 257 HDYILRSGIEFDVTASNIVIDTYAKCGDLLASRKAFDRIKCRDSVSWNTLINGYIQSRSY 316
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E L KM + PD IT VT+L
Sbjct: 317 GEGVKLFKKM---KMDLKPDSITFVTLL 341
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 120/237 (50%), Gaps = 7/237 (2%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGV-LLQACGHEKDIEIGKRVH-ELVSASTQFSNDF 133
+S+S + + L ++ + T V LL D E+GK +H +L A F +D
Sbjct: 312 QSRSYGEGVKLFKKMKMDLKPDSITFVTLLSISTRLADTELGKEIHCDL--AKLGFDSDL 369
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
+++ L+ MYS CG DS +VF+++K R++ WN +++ + E T + ++ ++
Sbjct: 370 VVSNALVDMYSKCGNVKDSLKVFENMKVRDIVTWNTIIAACVQAEDCTLAFRMISQMRNE 429
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
EL PD T ++ C IA G VH K G V V NALI MY KC+ ++
Sbjct: 430 -ELIPDMGTLLGILPICSLIAAKRQGKEVHACTFKFGFESTVPVGNALIEMYSKCSNLKY 488
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+++FE M +++V+W +++ + G ++ +M E G IPD I V ++
Sbjct: 489 CIRVFEDMKTKDVVTWTALVSAYGMYGEGKKALRAFAEME--EAGIIPDHIAFVAII 543
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 84/145 (57%), Gaps = 3/145 (2%)
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
WN+++ T N L++ L ++ ++ D +KPD +TFP VI AC + D G+ V
Sbjct: 1 WNSVIRALTHNGLFSKALDLYFKMK-DFNVKPDTYTFPSVINACAALGDFEIGNVVQNHV 59
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
++G D+++ NAL+ MY + + + +FE M R++VSWNS+I G+S NG+ E+
Sbjct: 60 LEIGFGFDLYIGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYSANGYWDEAL 119
Query: 287 DLLIKMMGCEEGFIPDVITVVTVLP 311
++ ++ G PD T+ +VLP
Sbjct: 120 EIYYELR--IAGLKPDNFTLSSVLP 142
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 125/245 (51%), Gaps = 40/245 (16%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-- 160
++ AC ++ G ++H V + +F +D ++ L+ MY+ C ++RRVFD +
Sbjct: 254 VVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIR 313
Query: 161 -----------------------------TRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
RN+ WNAL++G+T+N + L +F L
Sbjct: 314 NVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLK 373
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVH------GMAAKMGLIGDVFVSNALIAMY 245
++ + P ++TF ++ AC +AD+ G H G + G D+FV N+LI MY
Sbjct: 374 RES-IWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMY 432
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
KC +E+ ++FE M ER+ VSWN+II G+++NG+ E+ + KM+ C E PD +T
Sbjct: 433 MKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEK--PDHVT 490
Query: 306 VVTVL 310
++ VL
Sbjct: 491 MIGVL 495
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 35/239 (14%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL +C + + VH + TQFS + I RLI +Y C D+R++FD + R
Sbjct: 21 LLDSCLRSRSARGTRLVHARI-LMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQR 79
Query: 163 NLFQWNAL-------------------------------VSGFTKNELYTDVLSIFVELS 191
N F WN+L VSGF +++ + + L FV++
Sbjct: 80 NTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMH 139
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ L + ++F + AC G+ D+ G+ VH + +K DV++ +ALI MY KC V
Sbjct: 140 REDFL-LNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSV 198
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F M ERNLV+WNS+I + +NG + E+ ++ ++MM + G PD +T+ +V+
Sbjct: 199 ACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMM--DSGLEPDEVTLASVV 255
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 34/221 (15%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G L AC D+ +G +VH LVS S ++S D + + LI MYS CG + VF +
Sbjct: 151 GSALSACAGLMDLNMGTQVHALVSKS-RYSTDVYMGSALIDMYSKCGSVACAEEVFSGMI 209
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RNL WN+L++ + +N ++ L +FV + D+ L+PD T V+ AC + + G
Sbjct: 210 ERNLVTWNSLITCYEQNGPASEALEVFVRM-MDSGLEPDEVTLASVVSACASLCALKEGL 268
Query: 221 GVHGMAAKMG-LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP----------------- 262
+H K D+ + NAL+ MY KC+ V E ++F+ M
Sbjct: 269 QIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARA 328
Query: 263 --------------ERNLVSWNSIICGFSENGFSCESFDLL 289
+RN+VSWN++I G+++NG + E+ L
Sbjct: 329 ASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLF 369
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 7/186 (3%)
Query: 101 GVLLQACGHEKDIEIGKRVH-ELVSASTQFSN----DFIINTRLITMYSLCGFPLDSRRV 155
G LL AC + D+ +G++ H ++ +F + D + LI MY CG D RV
Sbjct: 385 GNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRV 444
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
F+ +K R+ WNA++ G+ +N + L IF ++ E KPD+ T V+ AC
Sbjct: 445 FEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGE-KPDHVTMIGVLCACSHAGL 503
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIIC 274
V G + GLI ++ + G+ + E L E MP + V W S++
Sbjct: 504 VEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLA 563
Query: 275 GFSENG 280
+G
Sbjct: 564 ACKVHG 569
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 118/210 (56%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L ACG +E GK++H ++ T + ++ + + L+ MYS C + VF +
Sbjct: 282 GSILTACGALAALEEGKQIHAYIT-RTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT 340
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN+ W A++ G+ +N + + F E+ D +KPD+FT VI +C +A + G+
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDG-IKPDDFTLGSVISSCANLASLEEGA 399
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H +A GL+ + VSNAL+ +YGKC +E+ +LF+ M + VSW +++ G+++ G
Sbjct: 400 QFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFG 459
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ DL KM+ G PD +T + VL
Sbjct: 460 KAKETIDLFEKMLA--NGLKPDGVTFIGVL 487
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 8/198 (4%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
I +RV + + A T ++ LIT C D++ +F + R+ W +V+
Sbjct: 197 IRDARRVFQEMEAKT-----VVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVT 251
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G T+N L + L +F + ++ + D +TF ++ ACG +A + G +H +
Sbjct: 252 GLTQNGLQLEALDVFRRMRAEG-VGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYE 310
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+VFV +AL+ MY KC + +F M RN++SW ++I G+ +N S E+ +M
Sbjct: 311 DNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEM 370
Query: 293 MGCEEGFIPDVITVVTVL 310
+G PD T+ +V+
Sbjct: 371 Q--MDGIKPDDFTLGSVI 386
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 110/284 (38%), Gaps = 71/284 (25%)
Query: 90 NLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSAS-TQFSNDFIINTRLITMYSLCGF 148
N + A L A G G + + VH L+ + Q F++N L+T Y+ G
Sbjct: 10 NRYAAILSSAAGD-----GGRTGVRVAGAVHCLILKTFLQAPPTFLLN-HLLTAYAKSGR 63
Query: 149 PLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS---------------- 192
+RRVFD + NLF NAL+S + L D+ +F +
Sbjct: 64 LARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSST 123
Query: 193 ---------------DTELKPDNFTFPCVIKACGGIADVGFGSGVH-------------- 223
+ ++P T +I ++D G VH
Sbjct: 124 GSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFV 183
Query: 224 -----GMAAKMGLIGD------------VFVSNALIAMYGKCAFVEEMVKLFEVMPERNL 266
M AKMGLI D V + N LI +C +E+ LF++M +R+
Sbjct: 184 GSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDS 243
Query: 267 VSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++W +++ G ++NG E+ D+ +M EG D T ++L
Sbjct: 244 ITWTTMVTGLTQNGLQLEALDVFRRMRA--EGVGIDQYTFGSIL 285
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 16/181 (8%)
Query: 101 GVLLQACGHEKDIEIGKRVH--ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
G ++ +C + +E G + H LVS ++ ++ L+T+Y CG D+ R+FD
Sbjct: 383 GSVISSCANLASLEEGAQFHCLALVSGLMRY---ITVSNALVTLYGKCGSIEDAHRLFDE 439
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADV 216
+ + W ALV+G+ + + + +F ++ ++ LKPD TF V+ AC G+ +
Sbjct: 440 MSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANG-LKPDGVTFIGVLSACSRAGLVEK 498
Query: 217 G---FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSI 272
G F S M G++ +I +Y + +E + + MP + W ++
Sbjct: 499 GCDYFDS----MQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATL 554
Query: 273 I 273
+
Sbjct: 555 L 555
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 128/247 (51%), Gaps = 8/247 (3%)
Query: 67 LQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSAS 126
L + + S AL+L + L D LLQAC + G+ +H + +
Sbjct: 91 LNTVLRIAASSAHPRIALALHRRRLAPPD-THTYPPLLQACTRLLALREGESLHAEAAKN 149
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT--RNLFQWNALVSGFTKNELYTDVL 184
+ F+ N+ L+ Y CG + RVFD + RNL WN++++GF N +VL
Sbjct: 150 GLVALVFVKNS-LVHHYGACGLFESAHRVFDEIPVLERNLVSWNSVMNGFAANGRPNEVL 208
Query: 185 SIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAM 244
+IF E + + +L PD FT V+ AC I + G VH A+K+GL+G+ V NALI +
Sbjct: 209 TIFRE-TLEADLMPDGFTIVSVLTACAEIGALTLGRRVHVFASKVGLVGNSHVGNALIDL 267
Query: 245 YGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
Y KC VE+ K+FE M R +VSW S+I G + NGF ++ +L M E IP
Sbjct: 268 YAKCGGVEDAWKVFEEMGVARTVVSWTSLIVGLAGNGFGKDALELFGLME--RERLIPTD 325
Query: 304 ITVVTVL 310
IT+V VL
Sbjct: 326 ITMVGVL 332
>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 117/207 (56%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
LQ C K + GK+VH+ + S QF D +N LI+MYS CG D+ VF S++ ++
Sbjct: 58 LQECVQAKSLAEGKKVHDHMR-SAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKD 116
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WNA++SG+ + + + +F ++ + LKP+ +F ++ AC + FG +H
Sbjct: 117 VVSWNAMISGYALHGRGQEAVDLFYQMQREG-LKPNQNSFISILSACQTPIVLEFGEQIH 175
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
K G DV VS ALI MY KC +E K+F M ERN+VSW ++I G+ ++G S
Sbjct: 176 SHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSK 235
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F L K++ G P+ ++ ++L
Sbjct: 236 EAFVLFQKLI--RSGTQPNKVSFASIL 260
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 114/208 (54%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + D+E G ++H + + + ++ LI+MY+ CG ++R+VFD+L++
Sbjct: 259 ILGACTNPNDLEQGLKLHAYIKQAG-LEQEVLVGNALISMYARCGSLANARQVFDNLRSP 317
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WNA+++G+ + + +F ++ +PD FT+ ++ C AD+ G +
Sbjct: 318 NRVSWNAMIAGYGEG-FMEEAFRLFRDMQQKG-FQPDRFTYASLLAICADRADLNRGKEL 375
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + DV V+ ALI+MY KC +EE K+F MPE+N VSWN+ I +G
Sbjct: 376 HSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSE 435
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F + +M + IPD +T +T+L
Sbjct: 436 KEAFQVFKQMR--RDDVIPDHVTFITLL 461
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL C D+ GK +H + T + D + T LI+MY+ CG ++R+VF+ + +
Sbjct: 359 LLAICADRADLNRGKELHSQI-VRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEK 417
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WNA ++ ++ + +F ++ D ++ PD+ TF ++ +C D G +
Sbjct: 418 NAVSWNAFIACCCRHGSEKEAFQVFKQMRRD-DVIPDHVTFITLLNSCTSPEDFERGRYI 476
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + G++ + V+NALI+MYG+C + + ++F + R+L SWN++I + ++G +
Sbjct: 477 HGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGAN 536
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+FDL IK EG D T + VL
Sbjct: 537 GSAFDLFIKYK--SEGGKGDKYTFINVL 562
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 110/209 (52%), Gaps = 4/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL +C +D E G+ +H + SN+ + N LI+MY CG D+R VF ++
Sbjct: 459 TLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANA-LISMYGRCGKLADAREVFYRIRR 517
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R+L WNA+++ + ++ +F++ S+ K D +TF V++A + D+ G
Sbjct: 518 RDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGG-KGDKYTFINVLRAIANLEDLDAGRK 576
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG+ K GL D+ + LI MY KC + + +F+ + E+++V WN+++ ++ +
Sbjct: 577 IHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAAYNHSDH 636
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M EG PD T +VL
Sbjct: 637 GQDALKLFQQMR--LEGVNPDSATYTSVL 663
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 115/208 (55%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E G+++H ++ + + +D ++T LI MY CG +R+VF+ ++ R
Sbjct: 158 ILSACQTPIVLEFGEQIHSHITKAG-YESDVNVSTALINMYCKCGSLELARKVFNEMRER 216
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A++SG+ ++ + +F +L + +P+ +F ++ AC D+ G +
Sbjct: 217 NVVSWTAMISGYVQHGDSKEAFVLFQKLIR-SGTQPNKVSFASILGACTNPNDLEQGLKL 275
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + GL +V V NALI+MY +C + ++F+ + N VSWN++I G+ E GF
Sbjct: 276 HAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE-GFM 334
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F L M ++GF PD T ++L
Sbjct: 335 EEAFRLFRDMQ--QKGFQPDRFTYASLL 360
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 79/151 (52%), Gaps = 2/151 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+A + +D++ G+++H LV + D I T LI MYS CG D+ VF +++ +
Sbjct: 561 VLRAIANLEDLDAGRKIHGLVEKAG-LEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEK 619
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA+++ + ++ D L +F ++ + + PD+ T+ V+ AC + + G
Sbjct: 620 DVVCWNAMLAAYNHSDHGQDALKLFQQMRLEG-VNPDSATYTSVLNACARLGAIEHGKKF 678
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
H + + D ++A G+ + ++E
Sbjct: 679 HTQLKEAAMETDTRHYACMVAALGRASLLKE 709
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 118/210 (56%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L ACG +E GK++H ++ T + ++ + + L+ MYS C + VF +
Sbjct: 282 GSILTACGALAALEEGKQIHAYIT-RTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT 340
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN+ W A++ G+ +N + + F E+ D +KPD+FT VI +C +A + G+
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDG-IKPDDFTLGSVISSCANLASLEEGA 399
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H +A GL+ + VSNAL+ +YGKC +E+ +LF+ M + VSW +++ G+++ G
Sbjct: 400 QFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFG 459
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ DL KM+ G PD +T + VL
Sbjct: 460 KAKETIDLFEKMLA--NGLKPDGVTFIGVL 487
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 8/198 (4%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
I +RV + + A T ++ LIT C D++ +F + R+ W +V+
Sbjct: 197 IRDARRVFQEMEAKT-----VVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVT 251
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G T+N L + L +F + ++ + D +TF ++ ACG +A + G +H +
Sbjct: 252 GLTQNGLQLEALDVFRRMRAEG-VGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYE 310
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+VFV +AL+ MY KC + +F M RN++SW ++I G+ +N S E+ +M
Sbjct: 311 DNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEM 370
Query: 293 MGCEEGFIPDVITVVTVL 310
+G PD T+ +V+
Sbjct: 371 Q--MDGIKPDDFTLGSVI 386
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 110/284 (38%), Gaps = 71/284 (25%)
Query: 90 NLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSAS-TQFSNDFIINTRLITMYSLCGF 148
N + A L A G G + + VH L+ + Q F++N L+T Y+ G
Sbjct: 10 NRYAAILSSAAGD-----GGRTGVRVAGAVHCLILKTFLQAPPTFLLN-HLLTAYAKSGR 63
Query: 149 PLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS---------------- 192
+RRVFD + NLF NAL+S + L D+ +F +
Sbjct: 64 LARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSST 123
Query: 193 ---------------DTELKPDNFTFPCVIKACGGIADVGFGSGVH-------------- 223
+ ++P T +I ++D G VH
Sbjct: 124 GSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFV 183
Query: 224 -----GMAAKMGLIGD------------VFVSNALIAMYGKCAFVEEMVKLFEVMPERNL 266
M AKMGLI D V + N LI +C +E+ LF++M +R+
Sbjct: 184 GSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDS 243
Query: 267 VSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++W +++ G ++NG E+ D+ +M EG D T ++L
Sbjct: 244 ITWTTMVTGLTQNGLQLEALDVFRRMRA--EGVGIDQYTFGSIL 285
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 16/181 (8%)
Query: 101 GVLLQACGHEKDIEIGKRVH--ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
G ++ +C + +E G + H LVS ++ ++ L+T+Y CG D+ R+FD
Sbjct: 383 GSVISSCANLASLEEGAQFHCLALVSGLMRY---ITVSNALVTLYGKCGSIEDAHRLFDE 439
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADV 216
+ + W ALV+G+ + + + +F ++ ++ LKPD TF V+ AC G+ +
Sbjct: 440 MSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANG-LKPDGVTFIGVLSACSRAGLVEK 498
Query: 217 G---FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSI 272
G F S M G++ +I +Y + +E + + MP + W ++
Sbjct: 499 GCDYFDS----MQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATL 554
Query: 273 I 273
+
Sbjct: 555 L 555
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 108/203 (53%), Gaps = 8/203 (3%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL----KTRNLFQW 167
D+ G +VH L A T+ +D + L+ +Y G ++RR+FD RN W
Sbjct: 115 DVRFGAQVHALAVA-TRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSW 173
Query: 168 NALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAA 227
N ++S + KN+ D + +F E+ E +P+ F F CV+ AC G D+ G VHG
Sbjct: 174 NTMISAYVKNDQSGDAIGVFREMVWSGE-RPNEFGFSCVVNACTGSRDLEAGRQVHGAVV 232
Query: 228 KMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFD 287
+ G DVF +NAL+ MY K +E +FE MP ++VSWN+ I G +G + +
Sbjct: 233 RTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALE 292
Query: 288 LLIKMMGCEEGFIPDVITVVTVL 310
LL++M G +P+V T+ +VL
Sbjct: 293 LLLQMK--SSGLVPNVFTLSSVL 313
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 106/210 (50%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC +D+E G++VH V T + D L+ MYS G + VF+ +
Sbjct: 211 VVNACTGSRDLEAGRQVHGAV-VRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAA 269
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA +SG + L + +++ S + L P+ FT V+KAC G G +
Sbjct: 270 DVVSWNAFISGCVTHGHDHRALELLLQMKS-SGLVPNVFTLSSVLKACAGAGAFNLGRQI 328
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K D FV+ L+ MY K F+++ K+F+ MP R+L+ WN++I G S +G
Sbjct: 329 HGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRH 388
Query: 283 CESFDLLIKMMGCEEGFIPDV--ITVVTVL 310
E L +M +EG DV T+ +VL
Sbjct: 389 GEVLSLFHRMR--KEGLDLDVNRTTLASVL 416
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 100/194 (51%), Gaps = 4/194 (2%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
++VH L S+ +IN LI Y CG + +VF ++ ++ +++ ++
Sbjct: 429 RQVHALAEKIGLLSDSHVING-LIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQ 487
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF 236
+ D + +FV++ L+PD+F ++ AC ++ G VH K DVF
Sbjct: 488 CDHGEDAIKLFVQMLRKG-LEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVF 546
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCE 296
NAL+ Y KC +E+ F +PER +VSW+++I G +++G + DL +M+ +
Sbjct: 547 AGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRML--D 604
Query: 297 EGFIPDVITVVTVL 310
EG P+ IT+ +VL
Sbjct: 605 EGVAPNHITLTSVL 618
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
E G L G + + G +H + S + + L+T+YS C P +R VFD
Sbjct: 5 ETIGSALARFGTSRSLFAGAHLHSHLLKSGLLAG---FSNHLLTLYSRCRLPSAARAVFD 61
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
+ W++LV+ ++ N + D L F + + + F P V+K DV
Sbjct: 62 EIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRG-RGVPCNEFALPVVLKCA---PDVR 117
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE----VMPERNLVSWNSII 273
FG+ VH +A L+ DVFV+NAL+A+YG V+E ++F+ V ERN VSWN++I
Sbjct: 118 FGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMI 177
Query: 274 CGFSENGFSCESFDLLIKMM 293
+ +N S ++ + +M+
Sbjct: 178 SAYVKNDQSGDAIGVFREMV 197
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 110/210 (52%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+AC +G+++H +V A F D + L+ MY+ GF D+R+VFD +
Sbjct: 312 VLKACAGAGAFNLGRQIHGFMVKAVADF--DEFVAVGLVDMYAKHGFLDDARKVFDFMPR 369
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDT-ELKPDNFTFPCVIKACGGIADVGFGS 220
R+L WNAL+SG + + + +VLS+F + + +L + T V+K+ +
Sbjct: 370 RDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTR 429
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH +A K+GL+ D V N LI Y KC ++ +K+F+ +++S +++ S+
Sbjct: 430 QVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCD 489
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L ++M+ +G PD + ++L
Sbjct: 490 HGEDAIKLFVQML--RKGLEPDSFVLSSLL 517
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 125/245 (51%), Gaps = 40/245 (16%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC I++G+ VH V + ND I++ + MY+ C ++R +FDS+ R
Sbjct: 259 VISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Query: 163 NLF-------------------------------QWNALVSGFTKNELYTDVLSIFVELS 191
N+ WNAL++G+T+N + LS+F L
Sbjct: 319 NVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK 378
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVH------GMAAKMGLIGDVFVSNALIAMY 245
++ + P ++TF ++KAC +AD+ G H G + G D+FV N+LI MY
Sbjct: 379 RES-VCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
KC VEE +F M ER+ VSWN++I GF++NG+ E+ +L +M+ + G PD IT
Sbjct: 438 VKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREML--DSGEKPDHIT 495
Query: 306 VVTVL 310
++ VL
Sbjct: 496 MIGVL 500
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 111/218 (50%), Gaps = 34/218 (15%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC D+ G ++H L++ S S D I + L+ MYS CG D+++VFD + RN
Sbjct: 159 LSACSGLNDMNRGVQIHSLIAKSPCLS-DVYIGSALVDMYSKCGNVNDAQQVFDEMGDRN 217
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN+L++ + +N + L +F ++ ++ ++PD T VI AC ++ + G VH
Sbjct: 218 VVSWNSLITCYEQNGPAVEALKVF-QVMLESWVEPDEVTLASVISACASLSAIKVGQEVH 276
Query: 224 GMAAKMG-LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-------------------- 262
KM L D+ +SNA + MY KC+ ++E +F+ MP
Sbjct: 277 ARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAAST 336
Query: 263 -----------ERNLVSWNSIICGFSENGFSCESFDLL 289
ERN+VSWN++I G+++NG + E+ L
Sbjct: 337 KAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLF 374
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 114/238 (47%), Gaps = 32/238 (13%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL +C K I R + FSN+ I RLI Y+ CG D R++FD + R
Sbjct: 25 LLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQR 84
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDN---------------------- 200
N+F WN++V+G TK + S+F + + ++
Sbjct: 85 NVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMH 144
Query: 201 --------FTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+TF + AC G+ D+ G +H + AK + DV++ +AL+ MY KC V
Sbjct: 145 KEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVN 204
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++F+ M +RN+VSWNS+I + +NG + E+ + M+ E PD +T+ +V+
Sbjct: 205 DAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVML--ESWVEPDEVTLASVI 260
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFS----NDFIINTRLITMYSLCGFPLDSRRVFD 157
+L+AC D+ +G + H ++ +F +D + LI MY CG + VF
Sbjct: 392 ILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 451
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
+ R+ WNA++ GF +N + L +F E+ E KPD+ T V+ ACG V
Sbjct: 452 KMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGE-KPDHITMIGVLSACGHAGFVE 510
Query: 218 FGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICG 275
G M G+ ++ + G+ F+EE + E MP + + V W S++
Sbjct: 511 EGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAA 570
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 118/208 (56%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC ++ G+R+H+ V + ++ + NT L+ MYS+CG D+R+VFD + R
Sbjct: 553 ILNACSSPAALDWGRRIHQQVIEAGLATDAHVANT-LVNMYSMCGSVKDARQVFDRMTQR 611
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ +NA++ G+ + L + L +F L + LKPD T+ ++ AC + + +
Sbjct: 612 DIVAYNAMIGGYAAHNLGKEALKLFDRLQEEG-LKPDKVTYINMLNACANSGSLEWAKEI 670
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + K G + D + NAL++ Y KC + + +F+ M +RN++SWN+II G +++G
Sbjct: 671 HSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRG 730
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L +M EG PD++T V++L
Sbjct: 731 QDVLQLFERMK--MEGIKPDIVTFVSLL 756
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 114/209 (54%), Gaps = 4/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+LL AC + + G+ +H V F D + LI+MY+ CG D+R +F+ +
Sbjct: 451 ILLNACVNPTALHWGREIHSRV-VKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVR 509
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+++ W A++ G K+ L + L++F ++ LKP+ T+ ++ AC A + +G
Sbjct: 510 KDIISWTAMIGGLAKSGLGAEALAVFQDMQQ-AGLKPNRVTYTSILNACSSPAALDWGRR 568
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H + GL D V+N L+ MY C V++ ++F+ M +R++V++N++I G++ +
Sbjct: 569 IHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNL 628
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L ++ EEG PD +T + +L
Sbjct: 629 GKEALKLFDRLQ--EEGLKPDKVTYINML 655
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 104/198 (52%), Gaps = 4/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
++ GK VH + + S D + T L+ MY+ CG D R+VF+ L R+L WN ++
Sbjct: 361 LKWGKTVHSHILNAGHES-DLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIG 419
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G + + + I+ ++ + + P+ T+ ++ AC + +G +H K G +
Sbjct: 420 GLAEGGNWEEASEIYHQMQREG-MMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFM 478
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
D+ V NALI+MY +C +++ LF M ++++SW ++I G +++G E+ + M
Sbjct: 479 FDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDM 538
Query: 293 MGCEEGFIPDVITVVTVL 310
+ G P+ +T ++L
Sbjct: 539 Q--QAGLKPNRVTYTSIL 554
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 8/234 (3%)
Query: 80 LNKALSLLQE-NLHNADLKEATGV-LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIIN 136
+ +AL LL+E H L AT + LL +C +E G+ +H E + A F D +
Sbjct: 225 IEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLF--DVNVA 282
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
++ MY+ CG ++R VFD ++T+++ W ++ G+ IF ++ + +
Sbjct: 283 NCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEG-V 341
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
P+ T+ V+ A G A + +G VH G D+ V AL+ MY KC ++ +
Sbjct: 342 VPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQ 401
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+FE + R+L++WN++I G +E G E+ ++ +M EG +P+ IT V +L
Sbjct: 402 VFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQ--REGMMPNKITYVILL 453
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 110/210 (52%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-- 160
+L+ C KD+ G+ VHE + + + +N LI MY CG ++R+V++ L
Sbjct: 147 MLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNA-LINMYIQCGSIEEARQVWNKLNHT 205
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R + WNA+V G+ + + L + E+ L T ++ +C + + G
Sbjct: 206 ERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHG-LALGRATTMRLLSSCKSPSALECGR 264
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H A K L+ DV V+N ++ MY KC + E ++F+ M +++VSW II G+++ G
Sbjct: 265 EIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCG 324
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S +F++ KM +EG +P+ IT + VL
Sbjct: 325 HSEIAFEIFQKMQ--QEGVVPNRITYINVL 352
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 118/209 (56%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C K ++ GK +H+ + S N+ + LI +Y C ++ VF +++
Sbjct: 9 LLKTCIDSKYLKQGKLIHQKI-VSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENP 67
Query: 163 -NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ WN L++ TKN ++ + L +F L LKPD FT+P V+KAC G+ VG+G
Sbjct: 68 LDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKM 127
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH K G DV V ++ + MY KC E+ +KLF+ MPER++ SWN++I + ++G
Sbjct: 128 VHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQ 187
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L +M GF PD +T+ TV+
Sbjct: 188 PEKALELFEEMK--VSGFKPDSVTLTTVI 214
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC ++++GK +H + + D +N+ LI +Y CG + VF ++
Sbjct: 314 ILMACSRSVNLQLGKFIHGYI-IRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKT 372
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN ++SG+ K Y + L IF ++ +KPD TF V+ AC +A + G +
Sbjct: 373 NVVSWNVMISGYVKVGSYLEALVIFTDMRK-AGVKPDAITFTSVLPACSQLAVLEKGKEI 431
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + L + V AL+ MY KC V+E + +F +PER+ VSW S+I + +G +
Sbjct: 432 HNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQA 491
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L KM + PD +T + +L
Sbjct: 492 FEALKLFEKMQQSDAK--PDKVTFLAIL 517
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 113/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC + GK VH V S F+ D ++ + + MY+ C D+ ++FD + R
Sbjct: 112 VLKACSGLGRVGYGKMVHTHVIKSG-FAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPER 170
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN ++S + ++ L +F E+ + KPD+ T VI +C + D+ G +
Sbjct: 171 DVASWNNVISCYYQDGQPEKALELFEEMKV-SGFKPDSVTLTTVISSCARLLDLERGKEI 229
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G D FVS+AL+ MYGKC +E ++FE + +N+VSWNS+I G+S G S
Sbjct: 230 HMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDS 289
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+L +M EEG P + T+ ++L
Sbjct: 290 KSCIELFRRMD--EEGIRPTLTTLSSIL 315
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 113/210 (53%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++ +C D+E GK +H ELV + F+ D +++ L+ MY CG ++ VF+ ++
Sbjct: 213 VISSCARLLDLERGKEIHMELVRSG--FALDGFVSSALVDMYGKCGCLEMAKEVFEQIQR 270
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N+ WN++++G++ + +F + + ++P T ++ AC ++ G
Sbjct: 271 KNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEG-IRPTLTTLSSILMACSRSVNLQLGKF 329
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG + + D+FV+++LI +Y KC + +F+ MP+ N+VSWN +I G+ + G
Sbjct: 330 IHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGS 389
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ + M + G PD IT +VLP
Sbjct: 390 YLEALVIFTDMR--KAGVKPDAITFTSVLP 417
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E GK +H + S N+ ++ L+ MY+ CG ++ +F+ L R
Sbjct: 415 VLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGA-LLDMYAKCGAVDEALHIFNQLPER 473
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
+ W ++++ + + + L +F E ++ KPD TF ++ AC G+ D G
Sbjct: 474 DFVSWTSMIAAYGSHGQAFEALKLF-EKMQQSDAKPDKVTFLAILSACSHAGLVDEG-CY 531
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 263
+ M A+ G V + LI + G+ + E ++ + P+
Sbjct: 532 YFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPD 574
>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 113/210 (53%), Gaps = 8/210 (3%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L ACG+ ++ GK VH V S S + + + L+ MY C S+ VFD +
Sbjct: 268 GTVLTACGNLGRLKQGKEVHAKVITSG-LSGNVFVESSLVDMYGKCRLVNQSQCVFDRMS 326
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+NL W AL+ G+ +N + V+ IF E K D ++F V++AC G+A V G
Sbjct: 327 VKNLVSWTALLGGYCQNGDFESVIRIFREGK-----KVDTYSFGTVLRACAGLAAVRQGK 381
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH K DV +AL+ +Y KC ++ ++F M RNL++WNS+I GF++NG
Sbjct: 382 EVHCQYVKRCCWRDVVTESALVDLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQNG 441
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E F L +M+ EEG PD I+ V VL
Sbjct: 442 RGGEVFQLFDEMI--EEGIRPDYISFVGVL 469
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 7/208 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC D+ +GK H +V ND +I+T LI MY D+ VF L
Sbjct: 168 VIKACSGLGDLRLGKCFHGVVMVRGFDLND-VISTALIDMYGRNSAVDDAILVFVELPQP 226
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W +++S FT+N++Y L F + L PD FTF V+ ACG + + G V
Sbjct: 227 DAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEV 286
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H GL G+VFV ++L+ MYGKC V + +F+ M +NLVSW +++ G+ +NG
Sbjct: 287 HAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNG-- 344
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ +I++ EG D + TVL
Sbjct: 345 --DFESVIRIF--REGKKVDTYSFGTVL 368
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 2/208 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ C G + H S ++ F+ N+ L + L ++RRVFD L +
Sbjct: 66 LLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFDGLFYK 125
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L W ++++G+ K E L +F+E+ ++P+ FT VIKAC G+ D+ G
Sbjct: 126 DLISWTSMITGYVKVEKPKKSLELFLEMLG-LGIEPNGFTLSAVIKACSGLGDLRLGKCF 184
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ G + +S ALI MYG+ + V++ + +F +P+ + + W SII F+ N
Sbjct: 185 HGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTRNDVY 244
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ M + G PD T TVL
Sbjct: 245 DKALGFFYSMCR-KHGLSPDGFTFGTVL 271
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA-FVE 252
T L F + +++ C G H A K GL D FV N+L+A+Y K +
Sbjct: 54 TRLSNKPFFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLF 113
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E ++F+ + ++L+SW S+I G+ + +S +L ++M+G G P+ T+ V+
Sbjct: 114 EARRVFDGLFYKDLISWTSMITGYVKVEKPKKSLELFLEMLGL--GIEPNGFTLSAVI 169
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 128/225 (56%), Gaps = 6/225 (2%)
Query: 88 QENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCG 147
Q+ +NA +E LL+ C H + GK +H L+ +++F +D ++ L+ +Y+ CG
Sbjct: 6 QQCKNNAGAREICHTLLKRCTHLNKLNEGKIIHALL-LNSRFRDDLVMQNTLLNLYAKCG 64
Query: 148 FPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVI 207
+ +R++FD + +R++ W AL++G+++++ D L + E+ LKP+ FT ++
Sbjct: 65 DLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLR-IGLKPNQFTLASLL 123
Query: 208 KACGGIA--DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
KA G+ DV G +HG+ + G +V+VS A++ MY +C +EE +F+VM +N
Sbjct: 124 KAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKN 183
Query: 266 LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
VSWN++I G++ G ++F L M+ E P T +VL
Sbjct: 184 EVSWNALIAGYARKGQGDKAFCLFSNML--RENVKPTHFTYSSVL 226
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 111/215 (51%), Gaps = 10/215 (4%)
Query: 96 LKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV 155
LK A+GV D+ G+++H L SN ++ + ++ MY+ C +++ +
Sbjct: 123 LKAASGV------GSTDVLQGRQLHGLCLRYGYDSNVYV-SCAILDMYARCHHLEEAQLI 175
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
FD + ++N WNAL++G+ + +F + + +KP +FT+ V+ AC +
Sbjct: 176 FDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLREN-VKPTHFTYSSVLCACASMGS 234
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
+ G VH + K G FV N L+ MY K +E+ K+F+ + +R++VSWNS++ G
Sbjct: 235 LEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTG 294
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+S++G + +M+ P+ IT + VL
Sbjct: 295 YSQHGLGKVALQRFEEML--RTRIAPNDITFLCVL 327
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 101/207 (48%), Gaps = 11/207 (5%)
Query: 85 SLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYS 144
++L+EN+ ++ +L AC +E GK VH L+ + F+ NT L+ MY+
Sbjct: 209 NMLRENVKPTHFTYSS--VLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNT-LLDMYA 265
Query: 145 LCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFP 204
G D+++VFD L R++ WN++++G++++ L L F E+ T + P++ TF
Sbjct: 266 KSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLR-TRIAPNDITFL 324
Query: 205 CVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
CV+ AC + G M K + + ++ + G+ ++ ++ MP +
Sbjct: 325 CVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIK 384
Query: 265 NLVS-WNSII--CGFSEN----GFSCE 284
+ W +++ C +N G++ E
Sbjct: 385 PTAAVWGALLGACRMHKNMELGGYAAE 411
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 115/200 (57%), Gaps = 3/200 (1%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
D + K++H + + + +L+ Y+ CG P +R +FD + +N+ +N ++
Sbjct: 50 DAKTLKKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMI 109
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
+ N LY D L +F +++ PDN+T+PCV+KAC ++ G +HG K+GL
Sbjct: 110 RSYVNNGLYQDALLVFKTMANQG-FYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGL 168
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
++++ N L++MYGKC +++ ++ + MP R++VSWNS++ G+++NG ++ L +
Sbjct: 169 DMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCRE 228
Query: 292 MMGCEEGFIPDVITVVTVLP 311
M + PD T+ ++LP
Sbjct: 229 MEDLK--LKPDAGTMGSLLP 246
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 87/165 (52%), Gaps = 3/165 (1%)
Query: 146 CGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPC 205
C L + +F LK ++L WN +++ + N + + + +++++ ++PD +
Sbjct: 253 CDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHG-VEPDAVSISS 311
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
V+ ACG ++ G +H + L ++ + NALI MY KC ++E +F+ M R+
Sbjct: 312 VLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRD 371
Query: 266 LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+VSW S+I + +G ++ L KM + GF PD I V+VL
Sbjct: 372 VVSWTSMISAYGMSGQGKDAVALFKKMR--DSGFTPDWIAFVSVL 414
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 10/226 (4%)
Query: 81 NKALSL-LQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
N+A+ L LQ +H + +A + +L ACG +G+R+HE V + + ++
Sbjct: 288 NEAVDLYLQMQVHGVE-PDAVSISSVLPACGDLSAAVLGRRIHEYVE-RKKLRPNLLLEN 345
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
LI MY+ CG ++R VFD + R++ W +++S + + D +++F ++ D+
Sbjct: 346 ALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKM-RDSGFT 404
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
PD F V+ AC V G + A+ G+ + N ++ + G+ ++E L
Sbjct: 405 PDWIAFVSVLAACSHAGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHL 464
Query: 258 FEVMP-ERNLVSWNSIICG---FSENGFSCESFDLLIKMMGCEEGF 299
MP E N W S++ +S + + D L ++ + G+
Sbjct: 465 TRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGY 510
>gi|356518950|ref|XP_003528138.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g64310-like [Glycine max]
Length = 551
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 121/198 (61%), Gaps = 4/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+ IG+ +H L S + +D + + L++MYS C + RVF S+ +L W+AL+
Sbjct: 221 LSIGQGLHCL-SQKSGLDSDSHVGSLLLSMYSRCKHMASAYRVFCSILNPDLVTWSALIV 279
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G++++ Y VL F +L+ +++ KPD+ V+ + +A+VG G VHG A + GL
Sbjct: 280 GYSQSGEYEKVLLFFRKLNMESK-KPDSVLIASVLASIAQMANVGLGCEVHGYALRHGLE 338
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
DV VS+AL+ MY KC F+ + +F VMPERN+VS+NS+I GF +G + E+F + KM
Sbjct: 339 LDVRVSSALVDMYSKCGFLHLGICVFRVMPERNIVSFNSVILGFGLHGCASEAFRMFDKM 398
Query: 293 MGCEEGFIPDVITVVTVL 310
+ E+G +PD T ++L
Sbjct: 399 L--EKGLVPDEATFSSLL 414
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 143/298 (47%), Gaps = 20/298 (6%)
Query: 19 LRQKKSQPQFPATVIQRNKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESK 78
L+ SQ F AT I R + I S+ L KT N S ++ + +S+
Sbjct: 30 LKTHLSQDPFYATKIVRLYAANNDI---NSAHHLFDKTPNRS---VYLWNSMIRAFAQSQ 83
Query: 79 SLNKALSLLQENLHNADLK---EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
A+SL + L AD+ +++AC + D + +RVH A+ D +
Sbjct: 84 RFFNAISLFRTML-GADISPDGHTYACVIRACANNFDFGMLRRVHGGAVAAG-LGRDPVC 141
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
+ L+ YS G ++RRVFD + +L WN+L+SG+ L+ + +F +
Sbjct: 142 CSALVAAYSKLGLVHEARRVFDGIAEPDLVLWNSLISGYGGFGLWDVGMQMF-SMMRLFG 200
Query: 196 LKPDNFTFPCVIKACGGIADVGF---GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+KPD +T ++ GIAD G G G+H ++ K GL D V + L++MY +C +
Sbjct: 201 MKPDGYTLAGLLV---GIADSGMLSIGQGLHCLSQKSGLDSDSHVGSLLLSMYSRCKHMA 257
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F + +LV+W+++I G+S++G E L + + E PD + + +VL
Sbjct: 258 SAYRVFCSILNPDLVTWSALIVGYSQSG-EYEKVLLFFRKLNMESK-KPDSVLIASVL 313
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 101/202 (50%), Gaps = 8/202 (3%)
Query: 111 KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNAL 170
K + K++H + T S D T+++ +Y+ + +FD R+++ WN++
Sbjct: 17 KSLLRAKQLHAFL-LKTHLSQDPFYATKIVRLYAANNDINSAHHLFDKTPNRSVYLWNSM 75
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
+ F +++ + + +S+F + ++ PD T+ CVI+AC D G VHG A G
Sbjct: 76 IRAFAQSQRFFNAISLFRTMLG-ADISPDGHTYACVIRACANNFDFGMLRRVHGGAVAAG 134
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
L D +AL+A Y K V E ++F+ + E +LV WNS+I G+ G +D+ +
Sbjct: 135 LGRDPVCCSALVAAYSKLGLVHEARRVFDGIAEPDLVLWNSLISGYGGFGL----WDVGM 190
Query: 291 KMMGCEE--GFIPDVITVVTVL 310
+M G PD T+ +L
Sbjct: 191 QMFSMMRLFGMKPDGYTLAGLL 212
>gi|297745258|emb|CBI40338.3| unnamed protein product [Vitis vinifera]
Length = 487
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG G VH +V AS N F+ N L++MY CG ++R+VFD ++ R
Sbjct: 132 VLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNG-LVSMYGRCGAWENARQVFDEMRER 190
Query: 163 ---NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+L WN++V+ + + + +F ++ D ++PD + V+ AC + G
Sbjct: 191 GVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRG 250
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
VHG A + GL DVFV NA++ MY KC +EE K+FE M +++VSWN+++ G+S+
Sbjct: 251 KQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQI 310
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G ++ L K+ + P+V+T+V++L
Sbjct: 311 GRFDDALGLFEKIREEKIELNPNVVTLVSLL 341
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLK--TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
T +I+MY P + V L + +F WN L+ DVL ++ +
Sbjct: 62 THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQR-L 120
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+PD++TFP V+KACG I G+ VH + G +VFV N L++MYG+C E
Sbjct: 121 GWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENA 180
Query: 255 VKLFEVMPER---NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++F+ M ER +LVSWNSI+ + + G S + + +M + G PD +++V VLP
Sbjct: 181 RQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTE-DLGIRPDAVSLVNVLP 239
>gi|224136754|ref|XP_002322407.1| predicted protein [Populus trichocarpa]
gi|222869403|gb|EEF06534.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 122/211 (57%), Gaps = 6/211 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C IE+G ++H L+ + N I +++L+ +YS CG + +VFD + R
Sbjct: 15 LLETCYRLNAIELGVKIHRLIPINLLRRNAGI-SSKLVRLYSSCGDVEVAHQVFDEMFKR 73
Query: 163 --NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ F WN+L++G+T++ LY D ++++ ++ + ++PD FTFP V+KACGGI + G
Sbjct: 74 GESAFPWNSLIAGYTESGLYEDAMALYFQMEEEG-VEPDQFTFPRVLKACGGIGLIRIGE 132
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH ++G D FV NAL+ MY KC + + ++F+ + ++ +SWNS++ G+ +G
Sbjct: 133 AVHRDLVRLGFANDGFVLNALVDMYAKCGDIVKARRIFDKIDCKDSISWNSMLTGYIRHG 192
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ M+ +G D + V T+L
Sbjct: 193 LIAEALHTFHSMV--HDGMELDSVAVSTILA 221
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 114/209 (54%), Gaps = 12/209 (5%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+ACG I IG+ VH +LV F+ND + L+ MY+ CG + +RR+FD +
Sbjct: 118 VLKACGGIGLIRIGEAVHRDLVRLG--FANDGFVLNALVDMYAKCGDIVKARRIFDKIDC 175
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ WN++++G+ ++ L + L F + D ++ D+ ++ ++
Sbjct: 176 KDSISWNSMLTGYIRHGLIAEALHTFHSMVHDG-MELDSVAVSTIL---ANVSSFEVAVQ 231
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG + G+ D ++N+LIA+Y ++ LF+ MP++++VSWNSII ++
Sbjct: 232 IHGWIVRRGMEWDFSIANSLIAVYSNGRKLDRARWLFDHMPKKDIVSWNSIISAHCKDLK 291
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ F+L+ + +G +PD IT V++L
Sbjct: 292 ALTYFELMER-----DGALPDKITFVSLL 315
>gi|147773389|emb|CAN64573.1| hypothetical protein VITISV_010383 [Vitis vinifera]
Length = 672
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 114/209 (54%), Gaps = 3/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC ++ G+ VH V F +D + L++ Y CG D+ RVFD + +
Sbjct: 47 VLKACADAFEVRKGREVHGXV-VKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEK 105
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN ++ F+ N + +VL +F E+ + L+P+ + V+ C G+ D S +
Sbjct: 106 DLVSWNTMIGVFSVNGCWXEVLDLFGEMRLRSGLRPNVVSVVSVLPVCAGVEDEVTASEI 165
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K+GL V V NAL+ +YGKC V + ++F M E+NLVSWN+II F G
Sbjct: 166 HGYVVKVGLEFQVIVGNALLDVYGKCGNVAALKQVFGEMVEKNLVSWNAIITSFGYKGHY 225
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ D+ M+ +EG P+ IT+ + LP
Sbjct: 226 RDALDMFRLMI--DEGLKPNSITISSFLP 252
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 6/209 (2%)
Query: 104 LQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L C +D +H +V +F I+ L+ +Y CG ++VF + +
Sbjct: 150 LPVCAGVEDEVTASEIHGYVVKVGLEFQ--VIVGNALLDVYGKCGNVAALKQVFGEMVEK 207
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL WNA+++ F Y D L +F L D LKP++ T + + G V
Sbjct: 208 NLVSWNAIITSFGYKGHYRDALDMF-RLMIDEGLKPNSITISSFLPVLVELEFFKAGREV 266
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + +MGL D+F++N+LI MY K E +F + +N+VSWN++I F++N F
Sbjct: 267 HGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFE 326
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ L+ +M + G +P+ +T VLP
Sbjct: 327 LVAVGLVRQMQ--DYGELPNSVTFTNVLP 353
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 87/153 (56%), Gaps = 15/153 (9%)
Query: 165 FQWNALVSGFTKN------ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
F WN L+ G++ E+Y ++ I V +PD+ TFP V+KAC +V
Sbjct: 8 FLWNTLIRGYSIAGVGGGLEVYNQMVRIGV--------RPDDHTFPFVLKACADAFEVRK 59
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G VHG K+G DVFV N L++ YG C + + ++F+ MPE++LVSWN++I FS
Sbjct: 60 GREVHGXVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSV 119
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
NG E DL +M G P+V++VV+VLP
Sbjct: 120 NGCWXEVLDLFGEMR-LRSGLRPNVVSVVSVLP 151
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 5/184 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+ VH S +D I LI MY+ G ++ VF L +N+ WNA+++ F
Sbjct: 263 GREVHG-SSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFA 321
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+N + + ++ EL P++ TF V+ AC + V G +H + MG D+
Sbjct: 322 QNRFELVAVGLVRQMQDYGEL-PNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDL 380
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL--IKMM 293
FVSNAL MY K ++ +F+ R+ VS+N +I G S+ ES L +++M
Sbjct: 381 FVSNALTDMYAKSGHLKLARNVFDT-SLRDEVSYNILIVGXSQTSDCSESLSLFSEMQLM 439
Query: 294 GCEE 297
G ++
Sbjct: 440 GLKQ 443
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + GK +H S + D ++ L MY+ G +R VFD+ R
Sbjct: 351 VLPACARMGLVRPGKEIHAR-SIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDT-SLR 408
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ +N L+ G ++ ++ LS+F E+ LK DN +F + AC + + G +
Sbjct: 409 DEVSYNILIVGXSQTSDCSESLSLFSEMQL-MGLKQDNVSFMGALSACANLTAIKQGKEI 467
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + +FV+N+L+ Y KC + +F+ M +++ SWN++I G+ G
Sbjct: 468 HGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGEL 527
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ DLL + M ++ D ++ + VL
Sbjct: 528 DTAIDLLTENMRKDDVESDDSVSFIAVL 555
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 114/197 (57%), Gaps = 3/197 (1%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
++GK+VH + T F D I+T+L+ MY+ CG D+ +F+++ RNL W A++S
Sbjct: 76 KLGKQVHAH-TIKTGFDADGFIDTKLLQMYARCGLLKDADFLFETMPMRNLHSWKAILSV 134
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
+ + L+ + +F L D ++ D F FP V KAC G+ V G +HG+ K
Sbjct: 135 YLDHGLFEEAFLLFQVLQFDG-VELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCL 193
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
+++VSNALI MYGKC +++ K+ MPER+ V+WNS+I + NG E+ + L KM
Sbjct: 194 NIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMK 253
Query: 294 GCEEGFIPDVITVVTVL 310
+ +P+V++ V+
Sbjct: 254 SLDYS-MPNVVSWSAVI 269
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 115/243 (47%), Gaps = 38/243 (15%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCG-----------FPLD 151
+L AC + +++GK++H ++ SN ++N L+ +Y CG F +
Sbjct: 303 VLPACARLQRLDLGKQLHGYITRHDFISNPVVVNA-LVDVYRRCGDMGGAAKIFLKFSVK 361
Query: 152 --------------------SRRVFDSLKT----RNLFQWNALVSGFTKNELYTDVLSIF 187
++ +FD + R L WN+++SG+ +N ++ + S+F
Sbjct: 362 NVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMF 421
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+ + ++PD+FT V+ AC + G +H A GL D FV AL+ MY K
Sbjct: 422 QNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSK 481
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
C + F+ + E+++ +WN++I G++ + LL KM G +G+ P++ T
Sbjct: 482 CQDLTAAQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKG--DGYHPNIYTWN 539
Query: 308 TVL 310
++L
Sbjct: 540 SIL 542
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 115/268 (42%), Gaps = 40/268 (14%)
Query: 80 LNKALSLLQENLHNADLKEAT---GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
++A S+ Q L ++ + G +L AC + GK +H S+ F+
Sbjct: 414 FDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFV-G 472
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD--- 193
L+ MYS C ++ FD + +++ WNAL+SG+T++ + + ++ D
Sbjct: 473 GALVEMYSKCQDLTAAQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYH 532
Query: 194 -------------------------------TELKPDNFTFPCVIKACGGIADVGFGSGV 222
++L+PD +T ++ AC +A + G
Sbjct: 533 PNIYTWNSILAGLVENRQLDLTMQLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQA 592
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + K G DV + AL+ MY KC ++ ++ + NLVS N+++ + +G
Sbjct: 593 HAHSIKCGYDTDVHIGAALVDMYAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHG 652
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E L M+ GFIPD +T ++VL
Sbjct: 653 EEGISLFQTMLAL--GFIPDHVTFLSVL 678
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 72/279 (25%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++ +AC +E+G+++H LV +F + ++ LI MY CG D+++V +
Sbjct: 165 LVFKACSGLGSVELGRQLHGLV-IKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPE 223
Query: 162 RNLFQWNALVSGFTKNEL-----------------------YTDVLSIFVELSSDTE--- 195
R+ WN++++ N + ++ V+ F + D E
Sbjct: 224 RDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIE 283
Query: 196 ---------LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
L P+ T V+ AC + + G +HG + I + V NAL+ +Y
Sbjct: 284 MLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYR 343
Query: 247 KCA--------FVEEMVK-----------------------LFEVMP----ERNLVSWNS 271
+C F++ VK LF+ M ER L+SWNS
Sbjct: 344 RCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNS 403
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
II G+ N E+F + M+ EEG PD T+ +VL
Sbjct: 404 IISGYVRNFMFDEAFSMFQNML-MEEGIEPDSFTLGSVL 441
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 3/182 (1%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
G++L AC +E GK+ H S + D I L+ MY+ CG ++ +D +
Sbjct: 573 VGIILPACSRLATLERGKQAHAH-SIKCGYDTDVHIGAALVDMYAKCGSLKYAQLAYDRI 631
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
NL NA+++ + + +S+F + + PD+ TF V+ +C + V G
Sbjct: 632 SNPNLVSHNAMLTACAMHGHGEEGISLFQTMLA-LGFIPDHVTFLSVLSSCVHVGSVETG 690
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSE 278
+ + + +++ + + + E +L + MP E + V W +++ G
Sbjct: 691 CEFFDLMGYYNVKPTLKHYTSMVDLLSRSGQLHEAYELIKKMPVECDSVLWGALLGGCVT 750
Query: 279 NG 280
+G
Sbjct: 751 HG 752
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 108/186 (58%), Gaps = 2/186 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ+C K IE GK++H + S + ++ T+L+ +Y +C ++ +FD + R
Sbjct: 7 LLQSCVVRKAIEPGKQLHARI-CQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKR 65
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NLF WN ++ G+ N Y +S++ ++ D L PD FTFP V+KAC ++ + G +
Sbjct: 66 NLFLWNVMIRGYAWNGPYELAISLYYQMR-DYGLVPDKFTFPFVLKACSALSAMEEGKKI 124
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + GL DVFV ALI MY KC VE ++F+ + ER++V WNS++ +S+NG
Sbjct: 125 HKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQP 184
Query: 283 CESFDL 288
ES L
Sbjct: 185 DESLAL 190
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 111/208 (53%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC +E GK++H+ V S +D + LI MY+ CG +R+VFD + R
Sbjct: 108 VLKACSALSAMEEGKKIHKDVIRSG-LESDVFVGAALIDMYAKCGCVESARQVFDKIDER 166
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN++++ +++N + L++ + + LKP TF I A + G +
Sbjct: 167 DVVCWNSMLATYSQNGQPDESLAL-CRVMAFNGLKPTEGTFVISIAASADNGLLPQGKEL 225
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + + G + V AL+ MY K V LFE++ E+ +VSWN++I G++ +G +
Sbjct: 226 HGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHA 285
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL +M G +PD IT V VL
Sbjct: 286 NEALDLFKEMKG---KVLPDHITFVGVL 310
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 112/200 (56%), Gaps = 5/200 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD-SLKTRNLFQWNAL 170
D +G +VH V+ ST S D + L+ MY GF ++RRVFD + + RN WN +
Sbjct: 115 DAGLGVQVHA-VAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGM 173
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
+S F KN+ +D + +F E+ + ++P+ F F CV+ AC G D+ G VH M + G
Sbjct: 174 MSAFVKNDRCSDAVELFGEMVW-SGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTG 232
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
DVF +NAL+ MY K + +F +P+ ++VSWN+ I G +G + +LL+
Sbjct: 233 YDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLL 292
Query: 291 KMMGCEEGFIPDVITVVTVL 310
+M G +P+V T+ ++L
Sbjct: 293 QMK--SSGLVPNVFTLSSIL 310
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 87/159 (54%), Gaps = 5/159 (3%)
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
L++ YS C P +RRVFD W++LV+ ++ N L + L+ F + +
Sbjct: 40 RNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRA-RG 98
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
++ + F P V+K D G G VH +A GL GD+FV+NAL+AMYG FV+E
Sbjct: 99 VRCNEFALPIVLKCA---PDAGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEAR 155
Query: 256 KLF-EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
++F E +RN VSWN ++ F +N ++ +L +M+
Sbjct: 156 RVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMV 194
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 99/193 (51%), Gaps = 4/193 (2%)
Query: 118 RVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKN 177
+VH L S+ ++N LI Y C + +VF+ + N+ + ++++ ++
Sbjct: 427 QVHALAEKIGFLSDSHVVNG-LIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQC 485
Query: 178 ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFV 237
+ D + +F+E+ L+PD F ++ AC ++ G VH K + DVF
Sbjct: 486 DHGEDAIKLFMEMLRKG-LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFA 544
Query: 238 SNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEE 297
NAL+ Y KC +E+ F +P++ +VSW+++I G +++G + D+ +M+ +E
Sbjct: 545 GNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMV--DE 602
Query: 298 GFIPDVITVVTVL 310
P+ IT+ +VL
Sbjct: 603 RIAPNHITLTSVL 615
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 104/210 (49%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC +D+E G++VH +V T + D L+ MYS G + VF +
Sbjct: 208 VVNACTGSRDLEAGRKVHAMV-VRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKT 266
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG- 221
++ WNA +SG + L + +++ S + L P+ FT ++KAC G F G
Sbjct: 267 DVVSWNAFISGCVLHGHDQHALELLLQMKS-SGLVPNVFTLSSILKACAGAGAGAFALGR 325
Query: 222 -VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG K D ++ AL+ MY K +++ K+FE +P ++L+ WN++I G S G
Sbjct: 326 QIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGG 385
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
ES L +M +EG + T+ VL
Sbjct: 386 CHGESLSLFCRMR--KEGSDINRTTLAAVL 413
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G+ +H K GL+ N L++ Y KC ++F+ P+ VSW+S++ +S
Sbjct: 22 LGAHIHAHLLKSGLLH--AFRNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYS 79
Query: 278 ENGFSCESFDLLIKMMG----CEEGFIPDVI 304
N E+ M C E +P V+
Sbjct: 80 NNALPREALAAFRAMRARGVRCNEFALPIVL 110
>gi|242062166|ref|XP_002452372.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
gi|241932203|gb|EES05348.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
Length = 691
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 109/200 (54%), Gaps = 5/200 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-TRNLFQWNAL 170
D+ G +VH L A+ + F+ N L+ MY G +++R+FD RN WN +
Sbjct: 115 DVRFGAQVHALAVATRLIQDVFVTNA-LVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGM 173
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
+S + KN+ D + +F E+ E +P+ F F CV+ AC G D G VHGM + G
Sbjct: 174 ISAYVKNDRCRDAVGVFREMVWSGE-RPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTG 232
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
DVF +NAL+ MY K +E +FE +P ++VSWN++I G +G + +LL+
Sbjct: 233 YDKDVFTANALVDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLL 292
Query: 291 KMMGCEEGFIPDVITVVTVL 310
+M G +P+V T+ +VL
Sbjct: 293 QMKPL--GVVPNVFTLSSVL 310
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 104/210 (49%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC +D E G++VH +V T + D L+ MYS G + VF+ +
Sbjct: 208 VVNACTGSRDWETGRQVHGMV-VRTGYDKDVFTANALVDMYSKLGDIEMAAVVFEKIPAA 266
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNAL++G + L + +++ + P+ FT V+KAC G G +
Sbjct: 267 DVVSWNALIAGCVTHGHDHRALELLLQMKP-LGVVPNVFTLSSVLKACAGAGAFNLGRQI 325
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K D FV+ L+ MY K F+++ K+F+ MP R+L+ WN++I G S +G
Sbjct: 326 HGFMIKADADSDEFVAVGLVDMYAKDGFLDDARKVFDFMPRRDLILWNALISGCSHDGRH 385
Query: 283 CESFDLLIKMMGCEEGFIPDV--ITVVTVL 310
E L +M +EG DV T+ VL
Sbjct: 386 GEVLSLFHRMR--KEGLDLDVNRTTLAAVL 413
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 112/209 (53%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC +G+++H + + S++F+ L+ MY+ GF D+R+VFD + R
Sbjct: 309 VLKACAGAGAFNLGRQIHGFMIKADADSDEFVA-VGLVDMYAKDGFLDDARKVFDFMPRR 367
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDT-ELKPDNFTFPCVIKACGGIADVGFGSG 221
+L WNAL+SG + + + +VLS+F + + +L + T V+K+ + +
Sbjct: 368 DLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAAVLKSTASLEAICHTKQ 427
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH +A K+GL+ D V N LI Y KC ++ +K+FE +++S S++ S+
Sbjct: 428 VHALAEKIGLLSDSHVVNGLIDSYWKCGRLDYAIKVFEESCSDDIISSTSMMTALSQCDH 487
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L ++M+ +G PD + ++L
Sbjct: 488 GEDAIKLFVQML--RKGLEPDSFVLSSLL 514
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 101/194 (52%), Gaps = 4/194 (2%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
K+VH L S+ ++N LI Y CG + +VF+ + ++ ++++ ++
Sbjct: 426 KQVHALAEKIGLLSDSHVVNG-LIDSYWKCGRLDYAIKVFEESCSDDIISSTSMMTALSQ 484
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF 236
+ D + +FV++ L+PD+F ++ AC ++ G VH K DVF
Sbjct: 485 CDHGEDAIKLFVQMLRKG-LEPDSFVLSSLLNACASLSAYEQGKQVHAHLIKRQFTSDVF 543
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCE 296
NAL+ Y KC +E+ F +PE+ +VSW+++I G +++G + +L +M+ +
Sbjct: 544 AGNALVYTYAKCGSIEDADMAFSGLPEKGVVSWSAMIGGLAQHGHGKRALELFHRML--D 601
Query: 297 EGFIPDVITVVTVL 310
EG P+ IT+ +VL
Sbjct: 602 EGVAPNNITLTSVL 615
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 90/180 (50%), Gaps = 8/180 (4%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G L G + + G +H + S ++ + L++ YS C P +R VFD +
Sbjct: 8 GSALARFGASRSLLAGAHLHSHLLKSGLLAS---YSNHLLSFYSRCRLPSAARAVFDEIP 64
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
W++LV+ ++ N + D L F + + + + P V+K DV FG+
Sbjct: 65 DPCHVSWSSLVTAYSNNGMPRDALWAFRSMRG-RGVPCNEYALPIVLKCA---PDVRFGA 120
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF-EVMPERNLVSWNSIICGFSEN 279
VH +A LI DVFV+NAL+AMYG V+E ++F E ERN VSWN +I + +N
Sbjct: 121 QVHALAVATRLIQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYVKN 180
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G+ +H K GL+ SN L++ Y +C +F+ +P+ VSW+S++ +S
Sbjct: 23 GAHLHSHLLKSGLLASY--SNHLLSFYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSN 80
Query: 279 NGFSCESFDLLIKMMG----CEEGFIPDVI 304
NG ++ M G C E +P V+
Sbjct: 81 NGMPRDALWAFRSMRGRGVPCNEYALPIVL 110
>gi|242093560|ref|XP_002437270.1| hypothetical protein SORBIDRAFT_10g023920 [Sorghum bicolor]
gi|241915493|gb|EER88637.1| hypothetical protein SORBIDRAFT_10g023920 [Sorghum bicolor]
Length = 597
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 119/210 (56%), Gaps = 6/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G ++ A G+ K G+ H V + + I+ + + MY+ CG +D+R+VFD +K
Sbjct: 252 GSVMTALGNLKRARQGREAHAQV-VTRGLCGNVIVESSTLDMYAKCGMMVDARKVFDRMK 310
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN W AL+ G+ ++ ++ VLS+F ++ + + D ++F ++++C G++ V G
Sbjct: 311 VRNAVSWCALLGGYCQSGMHEKVLSLFRQMYMEDD---DWYSFGTLLRSCSGLSAVKLGK 367
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H +M DV V +AL+ +Y KC VE ++FE RN+++WN++ICG ++NG
Sbjct: 368 EIHCRFMRMRGCRDVIVESALVDLYAKCGVVEYAYRVFERSSVRNMITWNAMICGCAQNG 427
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + L +M+ EG PD I+ + VL
Sbjct: 428 HAERAISLFNEML--REGVKPDYISFIGVL 455
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 1/188 (0%)
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNL 164
+AC +D+ G VH V + +D ++ + L+ MY G P D+RR F+ ++ +
Sbjct: 154 KACAVLRDLRAGACVHGTVVVRG-YGDDGVVLSALVDMYGHSGAPGDARRAFEEMRAPDG 212
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
+ +L+S F +N+ + + L F + + PD TF V+ A G + G H
Sbjct: 213 ICYTSLISAFVRNDWFNEALLWFRAMVVADGVWPDGCTFGSVMTALGNLKRARQGREAHA 272
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCE 284
GL G+V V ++ + MY KC + + K+F+ M RN VSW +++ G+ ++G +
Sbjct: 273 QVVTRGLCGNVIVESSTLDMYAKCGMMVDARKVFDRMKVRNAVSWCALLGGYCQSGMHEK 332
Query: 285 SFDLLIKM 292
L +M
Sbjct: 333 VLSLFRQM 340
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 4/226 (1%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
+S K LSL ++ D + G LL++C +++GK +H + D I+
Sbjct: 326 QSGMHEKVLSLFRQMYMEDDDWYSFGTLLRSCSGLSAVKLGKEIH-CRFMRMRGCRDVIV 384
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
+ L+ +Y+ CG + RVF+ RN+ WNA++ G +N +S+F E+ +
Sbjct: 385 ESALVDLYAKCGVVEYAYRVFERSSVRNMITWNAMICGCAQNGHAERAISLFNEMLREG- 443
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+KPD +F V+ AC V G + M+ G+ + N ++ + + F+EE
Sbjct: 444 VKPDYISFIGVLFACSHTGMVEEGRNYFNSMSKVYGIPPGIEHYNCIVDLLSRVEFLEEA 503
Query: 255 VKLFEVMPERNLVS-WNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
L P R+ S W +I+ + + + + KMM E F
Sbjct: 504 EDLVNKSPFRDDSSLWAAILGACATHTNPDVAVRVAKKMMELEPHF 549
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 8/204 (3%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
+G +H + + ++ ++ N L L + + FD L R++ +++++
Sbjct: 53 RLGYCLHARAARAGLLADRYLANALLAFYVRLPDHLPHALKAFDDLPRRDVVAHSSVLAA 112
Query: 174 FTKNELYTDVLSIFVELSSD-------TELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
F + L L ++S ++ P KAC + D+ G+ VHG
Sbjct: 113 FLRAGLPRRALLQLRTMASGGCGTDDDDDVAPRAHALSASAKACAVLRDLRAGACVHGTV 172
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
G D V +AL+ MYG + + FE M + + + S+I F N + E+
Sbjct: 173 VVRGYGDDGVVLSALVDMYGHSGAPGDARRAFEEMRAPDGICYTSLISAFVRNDWFNEAL 232
Query: 287 DLLIKMMGCEEGFIPDVITVVTVL 310
L + M +G PD T +V+
Sbjct: 233 -LWFRAMVVADGVWPDGCTFGSVM 255
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 117/208 (56%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L++A D+ +G+ +H +V S F + + L+ +Y+ CG + +VFD + +
Sbjct: 127 LIKAVTTMADVRLGETIHSVVIRSG-FGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK 185
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN++++GF +N + L+++ E++S +KPD FT ++ AC I + G V
Sbjct: 186 DLVAWNSVINGFAENGKPEEALALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLGKRV 244
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K+GL ++ SN L+ +Y +C VEE LF+ M ++N VSW S+I G + NGF
Sbjct: 245 HVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFG 304
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L K M EG +P IT V +L
Sbjct: 305 KEAIELF-KYMESTEGLLPCEITFVGIL 331
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 91/160 (56%), Gaps = 3/160 (1%)
Query: 152 SRRVFDSL-KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
+ +VF + K N+F WN L+ G+ + S++ E+ ++PD T+P +IKA
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
+ADV G +H + + G ++V N+L+ +Y C V K+F+ MPE++LV+WN
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S+I GF+ENG E+ L +M +G PD T+V++L
Sbjct: 192 SVINGFAENGKPEEALALYTEMNS--KGIKPDGFTIVSLL 229
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 82/183 (44%), Gaps = 5/183 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + +GKRVH + + + + L+ +Y+ CG +++ +FD + +
Sbjct: 228 LLSACAKIGALTLGKRVH-VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK 286
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGS 220
N W +L+ G N + + +F + S L P TF ++ AC G+ GF
Sbjct: 287 NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF-E 345
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSEN 279
M + + + ++ + + V++ + + MP + N+V W +++ + +
Sbjct: 346 YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 405
Query: 280 GFS 282
G S
Sbjct: 406 GDS 408
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 119/209 (56%), Gaps = 6/209 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD--SLKT 161
LQ+C H ++ GK +H + + F + I T LI MYS C S RVF+ +
Sbjct: 36 LQSCAHNANLSKGKELHTHLLKNAFFGSPLAI-TSLINMYSKCSLIDHSLRVFNFPTHHN 94
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N+F +NAL++GF N L L+++ ++ + PD FTFPCVI+ACG D +
Sbjct: 95 KNVFAYNALIAGFLANALPQRALALYNQMRH-LGIAPDKFTFPCVIRACGDDDDGFVVTK 153
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG+ K+GL DVFV +AL+ Y K FV E ++FE +P R++V WN+++ GF++ G
Sbjct: 154 IHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQIGR 213
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + +M G G +P TV VL
Sbjct: 214 FEEALGVFRRMGG--NGVVPCRYTVTGVL 240
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 108/209 (51%), Gaps = 3/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++ACG + D + ++H L+ D + + L+ Y F ++ RVF+ L R
Sbjct: 138 VIRACGDDDDGFVVTKIHGLM-FKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVR 196
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA+V+GF + + + L +F + + + P +T V+ + D G V
Sbjct: 197 DVVLWNAMVNGFAQIGRFEEALGVFRRMGGNG-VVPCRYTVTGVLSIFSVMGDFDNGRAV 255
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG KMG V VSNALI MYGKC V + + +FE+M E ++ SWNSI+ G
Sbjct: 256 HGFVTKMGYESGVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDH 315
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ L +MMG PD++TV TVLP
Sbjct: 316 YGTLRLFDRMMGSSR-VQPDLVTVTTVLP 343
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
D + G+ VH V+ + + +++ LI MY C D+ VF+ + ++F WN+++
Sbjct: 248 DFDNGRAVHGFVT-KMGYESGVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIM 306
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
S + + L +F + + ++PD T V+ AC +A + G +HG GL
Sbjct: 307 SVHERCGDHYGTLRLFDRMMGSSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVNGL 366
Query: 232 --------IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
DV ++NAL+ MY KC + + +F M E+++ SWN +I G+ +G+
Sbjct: 367 AKEESHDVFDDVLLNNALMDMYAKCGNMRDARMVFVNMREKDVASWNIMITGYGMHGYGG 426
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ D+ +M C+ +P+ I+ V +L
Sbjct: 427 EALDIFSRM--CQAQMVPNEISFVGLL 451
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 135/237 (56%), Gaps = 6/237 (2%)
Query: 76 ESKSLNKALSLLQ--ENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
++ N+A+ +L+ ++ H ++ LLQ C K++ G+R++ + S + F
Sbjct: 87 KAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIF 146
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
+ NT LI MY+ CG + ++++FD ++ ++++ WN L+ G+ ++ LY + + ++ D
Sbjct: 147 MWNT-LINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQD 205
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+ +KPD TF ++ AC +V G ++ + K G D+FV ALI M+ KC + +
Sbjct: 206 S-VKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGD 264
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F+ +P R+LV+W S+I G + +G ++ +L +M EEG PD + V++L
Sbjct: 265 ATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRME--EEGVQPDKVAFVSLL 319
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 119/208 (57%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC ++ G+++ + + + S+D + T L++MY+ CG D+ RVF+ + +
Sbjct: 419 ILGACSSPSALKRGQQIQDHIIEAGYGSDDRV-RTALLSMYAKCGSLKDAHRVFEKISKQ 477
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WNA+++ + ++E Y + L+ F L + +KP++ TF ++ C + G V
Sbjct: 478 NVVAWNAMITAYVQHEQYDNALATFQALLKEG-IKPNSSTFTSILNVCKSSDSLELGKWV 536
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + K GL D+ VSNAL++M+ C + LF MP+R+LVSWN+II GF ++G +
Sbjct: 537 HFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKN 596
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+FD KMM E G PD IT +L
Sbjct: 597 QVAFDYF-KMMQ-ESGIKPDKITFTGLL 622
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 121/208 (58%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC ++++ G+ ++ L+ + + D + T LI M+ CG D+ +VFD+L TR
Sbjct: 217 MLNACADARNVDKGRELYNLILKAG-WDTDLFVGTALINMHIKCGDIGDATKVFDNLPTR 275
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L W ++++G ++ + ++F + + ++PD F +++AC + G V
Sbjct: 276 DLVTWTSMITGLARHGRFKQACNLFQRMEEEG-VQPDKVAFVSLLRACNHPEALEQGKKV 334
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H ++G +++V A+++MY KC +E+ +++F+++ RN+VSW ++I GF+++G
Sbjct: 335 HARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRI 394
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F KM+ E G P+ +T +++L
Sbjct: 395 DEAFLFFNKMI--ESGIEPNRVTFMSIL 420
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 115/211 (54%), Gaps = 10/211 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C +E+GK VH L+ + +D ++ L++M+ CG + ++ +F+ + R
Sbjct: 520 ILNVCKSSDSLELGKWVHFLIMKAG-LESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKR 578
Query: 163 NLFQWNALVSGFT---KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+L WN +++GF KN++ D + ++ ++ +KPD TF ++ AC + G
Sbjct: 579 DLVSWNTIIAGFVQHGKNQVAFD----YFKMMQESGIKPDKITFTGLLNACASPEALTEG 634
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H + + DV V LI+MY KC +E+ ++F +P++N+ SW S+I G++++
Sbjct: 635 RRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQH 694
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ +L +M +EG PD IT V L
Sbjct: 695 GRGKEALELFYQMQ--QEGVKPDWITFVGAL 723
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 114/211 (54%), Gaps = 10/211 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+AC H + +E GK+VH + + + + T +++MY+ CG D+ VFD +K R
Sbjct: 318 LLRACNHPEALEQGKKVHARMK-EVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGR 376
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A+++GF ++ + F ++ ++ ++P+ TF ++ AC + + G +
Sbjct: 377 NVVSWTAMIAGFAQHGRIDEAFLFFNKMI-ESGIEPNRVTFMSILGACSSPSALKRGQQI 435
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN--- 279
+ G D V AL++MY KC +++ ++FE + ++N+V+WN++I + ++
Sbjct: 436 QDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQY 495
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +F L+K EG P+ T ++L
Sbjct: 496 DNALATFQALLK-----EGIKPNSSTFTSIL 521
>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
Length = 608
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 135/288 (46%), Gaps = 37/288 (12%)
Query: 57 NNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQ---ACGHEKDI 113
++A + LH + S L LL+ L + L+ VL A G + +
Sbjct: 60 DDAPRRDLHLYSALLAAVSHSSDPELVLPLLRRMLSDDALRPDHFVLASLASAAGRLRSL 119
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN---------- 163
+G+++H +AS +S D ++ + LI MY CG P D+R+VFDS+ +N
Sbjct: 120 RLGRQLHAHFAASP-YSADNVVKSSLIDMYCKCGVPQDARKVFDSIGVKNSVVWTALISG 178
Query: 164 ---------------------LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFT 202
LF W AL+SGF K YT + +FVE+ D D F
Sbjct: 179 YASNGCTGEALDLFQSMPAHGLFTWTALISGFVKAGNYTGAMGLFVEMRRDDIRIHDAFV 238
Query: 203 FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
VI +A + G +HG ++G + + V NAL+ MY KC+ + ++FE +
Sbjct: 239 LATVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVGNALVDMYSKCSDIHSAREVFEGIT 298
Query: 263 ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
R+++SW +I+ G +++G + E F L +M+ G P+ +T V ++
Sbjct: 299 VRDVISWTTILVGEAQHGRAEEVFALYNRML--LAGMKPNEVTFVGLI 344
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L++ Y+ D+RR FD R+L ++AL++ + + VL + + SD L+P
Sbjct: 42 LVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAVSHSSDPELVLPLLRRMLSDDALRP 101
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D+F + A G + + G +H A D V ++LI MY KC ++ K+F
Sbjct: 102 DHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSADNVVKSSLIDMYCKCGVPQDARKVF 161
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ + +N V W ++I G++ NG + E+ DL M
Sbjct: 162 DSIGVKNSVVWTALISGYASNGCTGEALDLFQSM 195
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 126/245 (51%), Gaps = 40/245 (16%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC I++G+ VH V + + ND I++ + MY+ C ++R +FDS+ R
Sbjct: 259 VISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Query: 163 NLF-------------------------------QWNALVSGFTKNELYTDVLSIFVELS 191
N+ WNAL++G+T+N + LS+F L
Sbjct: 319 NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK 378
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVH------GMAAKMGLIGDVFVSNALIAMY 245
++ + P +++F ++KAC +A++ G H G + G D+FV N+LI MY
Sbjct: 379 RES-VCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
KC VEE +F M ER+ VSWN++I GF++NG+ E+ +L +M+ E G PD IT
Sbjct: 438 VKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREML--ESGEKPDHIT 495
Query: 306 VVTVL 310
++ VL
Sbjct: 496 MIGVL 500
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 116/238 (48%), Gaps = 32/238 (13%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL +C K I R + FSN+ I RLI YS CG D R+VFD + R
Sbjct: 25 LLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQR 84
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDN---------------------- 200
N++ WN++V+G TK + S+F + + ++
Sbjct: 85 NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMH 144
Query: 201 --------FTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
++F V+ AC G+ D+ G VH + AK + DV++ +AL+ MY KC V
Sbjct: 145 KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVN 204
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++F+ M +RN+VSWNS+I F +NG + E+ D+ M+ E PD +T+ +V+
Sbjct: 205 DAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML--ESRVEPDEVTLASVI 260
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 113/219 (51%), Gaps = 34/219 (15%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC D+ G +VH L+ A + F +D I + L+ MYS CG D++RVFD + R
Sbjct: 158 VLSACSGLNDMNKGVQVHSLI-AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR 216
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN+L++ F +N + L +F ++ ++ ++PD T VI AC ++ + G V
Sbjct: 217 NVVSWNSLITCFEQNGPAVEALDVF-QMMLESRVEPDEVTLASVISACASLSAIKVGQEV 275
Query: 223 HGMAAKMG-LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP------------------- 262
HG K L D+ +SNA + MY KC+ ++E +F+ MP
Sbjct: 276 HGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAS 335
Query: 263 ------------ERNLVSWNSIICGFSENGFSCESFDLL 289
ERN+VSWN++I G+++NG + E+ L
Sbjct: 336 TKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLF 374
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFS----NDFIINTRLITMYSLCGFPLDSRRVFD 157
+L+AC ++ +G + H ++ +F +D + LI MY CG + VF
Sbjct: 392 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 451
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
+ R+ WNA++ GF +N + L +F E+ E KPD+ T V+ ACG V
Sbjct: 452 KMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE-KPDHITMIGVLSACGHAGFVE 510
Query: 218 FGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICG 275
G M G+ ++ + G+ F+EE + E MP + + V W S++
Sbjct: 511 EGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 187 FVELSSDTELKPDNFTFPCVIKAC-GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
F++L++D D+ F ++ +C + VH K G ++F+ N LI Y
Sbjct: 6 FLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAY 65
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
KC +E+ ++F+ MP+RN+ +WNS++ G ++ GF E+ L M
Sbjct: 66 SKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSM 112
>gi|222632633|gb|EEE64765.1| hypothetical protein OsJ_19621 [Oryza sativa Japonica Group]
Length = 656
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 120/208 (57%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C K++ +G +VH + + + + + L+ MY C FP ++ RVF+ L +
Sbjct: 189 VLGHCASTKEVVLGSQVHTQ-ALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEK 247
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A+++ +T+NEL+ D L +F+++ + ++P+ FT+ + +C G+A + G+ +
Sbjct: 248 NIVSWTAIMTAYTQNELFEDALQLFLDMEMEG-VRPNEFTYAVALNSCAGLATLKNGNAL 306
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
K G G + V NAL+ MY K VE+ ++F MP R++VSWNSII G++ +G +
Sbjct: 307 GACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRA 366
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + M+ EE +P +T + VL
Sbjct: 367 REAMEAFHDMLFAEE--VPSYVTFIGVL 392
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 6/163 (3%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
++ +GK VH V + +F D + LI +Y CG +R+VFD++ +RN N L+
Sbjct: 31 ELSLGKAVHARVVRAARF--DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLM 88
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
SG+ + + D L++ + + + + A + G HG A K GL
Sbjct: 89 SGYASSGRHRDALALL----RVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGL 144
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+V +A++ MY +CA ++E VK + E+ + +IC
Sbjct: 145 AEHPYVCSAVLHMYCQCAHMDEAVKYSKKHGEKCRAMGSCVIC 187
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
++ G VH + DV N LIA+Y KC + ++F+ MP RN VS N ++
Sbjct: 30 GELSLGKAVHARVVRAARF-DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLM 88
Query: 274 CGFSENGFSCESFDLL 289
G++ +G ++ LL
Sbjct: 89 SGYASSGRHRDALALL 104
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 112/209 (53%), Gaps = 4/209 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L++C + + G+++H + S D ++ TRL+ +Y+ CG +RR+FD +
Sbjct: 67 ATILRSCVLSRAVRPGRQLHARLLVSG-LGLDAVLATRLVDLYASCGLVSVARRLFDEMP 125
Query: 161 TR-NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+ N+F WN L+ + ++ + ++ E+ + ++PDNFT+P V+KAC + D+G G
Sbjct: 126 NQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAG 185
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
VH + DVFV LI MY KC V+E +F+ R+ V WNS+I +N
Sbjct: 186 REVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQN 245
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVT 308
G E+ L M EG P ++T+V+
Sbjct: 246 GRPAEALALCRNMAA--EGIAPTIVTLVS 272
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC D+ G+ VH+ V T ++ D + LI MY+ CG ++ VFDS R
Sbjct: 172 VLKACAALLDLGAGREVHDRV-MRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVR 230
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN++++ +N + L++ ++++ + P T I A + G +
Sbjct: 231 DAVVWNSMIAACGQNGRPAEALALCRNMAAEG-IAPTIVTLVSAISAAADAGALPRGREL 289
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + G + +L+ MY K +V LF+ + R L+SWN++ICGF +G +
Sbjct: 290 HGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHA 349
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L +M E +PD IT V VL
Sbjct: 350 DHACELFRRMRN-EAQVMPDHITFVGVL 376
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F + + T L+ MY+ G+ +R +FD L R L WNA++ GF + +F
Sbjct: 298 FGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFR 357
Query: 189 ELSSDTELKPDNFTFPCVIKAC--GGI 213
+ ++ ++ PD+ TF V+ AC GG+
Sbjct: 358 RMRNEAQVMPDHITFVGVLSACNHGGM 384
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 203 FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ ++++C V G +H GL D ++ L+ +Y C V +LF+ MP
Sbjct: 66 YATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMP 125
Query: 263 ER-NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ N+ WN +I ++ +G + +L +M+ C PD T VL
Sbjct: 126 NQGNVFLWNVLIRAYARDGPREAAIELYREMLACGS-MEPDNFTYPPVL 173
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 120/208 (57%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C K++ +G +VH + + + + + L+ MY C FP ++ RVF+ L +
Sbjct: 220 VLGHCASTKEVVLGSQVHTQ-ALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEK 278
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A+++ +T+NEL+ D L +F+++ + ++P+ FT+ + +C G+A + G+ +
Sbjct: 279 NIVSWTAIMTAYTQNELFEDALQLFLDMEMEG-VRPNEFTYAVALNSCAGLATLKNGNAL 337
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
K G G + V NAL+ MY K VE+ ++F MP R++VSWNSII G++ +G +
Sbjct: 338 GACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRA 397
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + M+ EE +P +T + VL
Sbjct: 398 REAMEAFHDMLFAEE--VPSYVTFIGVL 423
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ A H + ++G++ H + + ++ + ++ MY C ++ +VFD++ + N
Sbjct: 120 VAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSA-VLHMYCQCAHMDEAVKVFDNVSSFN 178
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+F +N++++GF SI + + + D+ ++ V+ C +V GS VH
Sbjct: 179 VFAFNSMINGFLDRGQMDGSTSIVRSMVRNVG-QWDHVSYVAVLGHCASTKEVVLGSQVH 237
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
A K L +V+V +AL+ MYGKC F E ++FEV+PE+N+VSW +I+ +++N
Sbjct: 238 TQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFE 297
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L + M EG P+ T L
Sbjct: 298 DALQLFLDME--MEGVRPNEFTYAVAL 322
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 6/169 (3%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
++ +GK VH V + +F D + LI +Y CG +R+VFD++ +RN N L+
Sbjct: 31 ELSLGKAVHARVVRAARF--DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLM 88
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
SG+ + + D L++ + + + + A + G HG A K GL
Sbjct: 89 SGYASSGRHRDALALL----RVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGL 144
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+V +A++ MY +CA ++E VK+F+ + N+ ++NS+I GF + G
Sbjct: 145 AEHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRG 193
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
++ G VH + DV N LIA+Y KC + ++F+ MP RN VS N ++
Sbjct: 30 GELSLGKAVHARVVRAARF-DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLM 88
Query: 274 CGFSENGFSCESFDLL 289
G++ +G ++ LL
Sbjct: 89 SGYASSGRHRDALALL 104
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 135/237 (56%), Gaps = 6/237 (2%)
Query: 76 ESKSLNKALSLLQ--ENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
++ N+A+ +L+ ++ H ++ LLQ C K++ G+R++ + S + F
Sbjct: 87 KAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIF 146
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
+ NT LI MY+ CG + ++++FD ++ ++++ WN L+ G+ ++ LY + + ++ D
Sbjct: 147 MRNT-LINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQD 205
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+ +KPD TF ++ AC +V G ++ + K G D+FV ALI M+ KC + +
Sbjct: 206 S-VKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGD 264
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F+ +P R+LV+W S+I G + +G ++ +L +M EEG PD + V++L
Sbjct: 265 ATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRME--EEGVQPDKVAFVSLL 319
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 119/208 (57%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC ++ G+++ + + + S+D + T L++MY+ CG D+ RVF+ + +
Sbjct: 419 ILGACSSPSALKRGQQIQDHIIEAGYGSDDRV-RTALLSMYAKCGSLKDAHRVFEKISKQ 477
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WNA+++ + ++E Y + L+ F L + +KP++ TF ++ C + G V
Sbjct: 478 NVVAWNAMITAYVQHEQYDNALATFQALLKEG-IKPNSSTFTSILNVCKSSDSLELGKWV 536
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + K GL D+ VSNAL++M+ C + LF MP+R+LVSWN+II GF ++G +
Sbjct: 537 HFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKN 596
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+FD KMM E G PD IT +L
Sbjct: 597 QVAFDYF-KMMQ-ESGIKPDKITFTGLL 622
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 121/208 (58%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC ++++ G+ ++ L+ + + D + T LI M+ CG D+ +VFD+L TR
Sbjct: 217 MLNACADARNVDKGRELYNLILKAG-WDTDLFVGTALINMHIKCGDIGDATKVFDNLPTR 275
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L W ++++G ++ + ++F + + ++PD F +++AC + G V
Sbjct: 276 DLVTWTSMITGLARHGRFKQACNLFQRMEEEG-VQPDKVAFVSLLRACNHPEALEQGKKV 334
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H ++G +++V A+++MY KC +E+ +++F+++ RN+VSW ++I GF+++G
Sbjct: 335 HARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRI 394
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F KM+ E G P+ +T +++L
Sbjct: 395 DEAFLFFNKMI--ESGIEPNRVTFMSIL 420
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 115/211 (54%), Gaps = 10/211 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C +E+GK VH L+ + +D ++ L++M+ CG + ++ +F+ + R
Sbjct: 520 ILNVCKSSDSLELGKWVHFLIMKAG-LESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKR 578
Query: 163 NLFQWNALVSGFT---KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+L WN +++GF KN++ D + ++ ++ +KPD TF ++ AC + G
Sbjct: 579 DLVSWNTIIAGFVQHGKNQVAFD----YFKMMQESGIKPDKITFTGLLNACASPEALTEG 634
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H + + DV V LI+MY KC +E+ ++F +P++N+ SW S+I G++++
Sbjct: 635 RRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQH 694
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ +L +M +EG PD IT V L
Sbjct: 695 GRGKEALELFYQMQ--QEGVKPDWITFVGAL 723
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 114/211 (54%), Gaps = 10/211 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+AC H + +E GK+VH + + + + T +++MY+ CG D+ VFD +K R
Sbjct: 318 LLRACNHPEALEQGKKVHARMK-EVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGR 376
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A+++GF ++ + F ++ ++ ++P+ TF ++ AC + + G +
Sbjct: 377 NVVSWTAMIAGFAQHGRIDEAFLFFNKMI-ESGIEPNRVTFMSILGACSSPSALKRGQQI 435
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN--- 279
+ G D V AL++MY KC +++ ++FE + ++N+V+WN++I + ++
Sbjct: 436 QDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQY 495
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +F L+K EG P+ T ++L
Sbjct: 496 DNALATFQALLK-----EGIKPNSSTFTSIL 521
>gi|302824994|ref|XP_002994134.1| hypothetical protein SELMODRAFT_138241 [Selaginella moellendorffii]
gi|300138010|gb|EFJ04795.1| hypothetical protein SELMODRAFT_138241 [Selaginella moellendorffii]
Length = 439
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 121/222 (54%), Gaps = 11/222 (4%)
Query: 96 LKEATGVL------LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFP 149
++E G++ L A K++ G+++HEL + + +D + T ++TMY G
Sbjct: 2 IREEPGIIPTRITFLHALEKLKNLAEGRKIHEL-AITVGLESDTAVGTAIVTMYGKSGSL 60
Query: 150 LDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKA 209
D++RVFD LK R++ W AL++ +T+N + L ++ + D + P+ +TF VI A
Sbjct: 61 ADAKRVFDRLKRRDVVAWTALITAYTQNGHCEEALDLYSSMEPDG-VAPNQYTFTIVIDA 119
Query: 210 CGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSW 269
C + + G +H GL + V N+LI +YG C + E ++F+ MP R+ VSW
Sbjct: 120 CAELGRLDEGIAIHARITAAGLESWIEVVNSLINLYGNCKRLSEAERIFQRMPRRSSVSW 179
Query: 270 NSIICGFSENGFSCESFDLLIKMMGCEEGFIP-DVITVVTVL 310
NS+I ++ NG ++ DL +M G +G + D +T V VL
Sbjct: 180 NSMIAAYAHNGHPGDAIDLYKRMRG--DGSVKLDPVTFVNVL 219
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 107/214 (50%), Gaps = 8/214 (3%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+++ AC ++ G +H ++A+ S ++N+ LI +Y C ++ R+F +
Sbjct: 115 IVIDACAELGRLDEGIAIHARITAAGLESWIEVVNS-LINLYGNCKRLSEAERIFQRMPR 173
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R+ WN++++ + N D + ++ + D +K D TF V+ AC D+ G
Sbjct: 174 RSSVSWNSMIAAYAHNGHPGDAIDLYKRMRGDGSVKLDPVTFVNVLGACYSQEDLAAGRS 233
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-----NLVSWNSIICGF 276
+H A GL + +++A ++MYG+C VEE + FE M + N VSW ++I
Sbjct: 234 IHHDAIARGLGSHLVLASAAVSMYGRCGSVEESMATFERMEIKDGVAANDVSWMNMISAL 293
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +G E+ +L +M EG P I +++L
Sbjct: 294 ARHGSIDEALELFREMR--LEGGKPSEIVFISIL 325
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 123/239 (51%), Gaps = 35/239 (14%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL +C K +R+H + TQFS++ I RL+ Y CG+ D+R+VFD + R
Sbjct: 25 LLDSCVRSKSGIDARRIHARI-IKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQR 83
Query: 163 NLFQ-------------------------------WNALVSGFTKNELYTDVLSIFVELS 191
N F WNA+VSGF +++ + + L FV++
Sbjct: 84 NTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMH 143
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
S+ + + ++F + AC G+ D+ G +H + +K + DV++ +AL+ MY KC V
Sbjct: 144 SE-DFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVV 202
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ F+ M RN+VSWNS+I + +NG + ++ ++ + MM + G PD IT+ +V+
Sbjct: 203 ACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMM--DNGVEPDEITLASVV 259
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 135/280 (48%), Gaps = 42/280 (15%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNA-DLKEAT-GVLLQACGHEKDIEIGKRVHELVSAST 127
+ T E++ KAL + + N + E T ++ AC I G ++H V
Sbjct: 223 LITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRD 282
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQ--------------------- 166
++ ND ++ L+ MY+ C ++R VFD + RN+
Sbjct: 283 KYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMF 342
Query: 167 ----------WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
WNAL++G+T+N + + +F+ L ++ + P ++TF ++ AC +AD+
Sbjct: 343 SNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRES-IWPTHYTFGNLLNACANLADL 401
Query: 217 GFGSGVHGMAAKMGLI------GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
G H K G D+FV N+LI MY KC VE+ +FE M ER++VSWN
Sbjct: 402 KLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWN 461
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++I G+++NG+ + ++ KM+ G PD +T++ VL
Sbjct: 462 AMIVGYAQNGYGTNALEIFRKML--VSGQKPDHVTMIGVL 499
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 104/193 (53%), Gaps = 6/193 (3%)
Query: 90 NLHNAD--LKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC 146
++H+ D L E + G L AC D+ +G ++H L+S S ++ D + + L+ MYS C
Sbjct: 141 DMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKS-RYLLDVYMGSALVDMYSKC 199
Query: 147 GFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCV 206
G ++R FD + RN+ WN+L++ + +N L +FV + D ++PD T V
Sbjct: 200 GVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFV-MMMDNGVEPDEITLASV 258
Query: 207 IKACGGIADVGFGSGVHGMAAKMG-LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
+ AC + + G +H K D+ + NAL+ MY KC V E +F+ MP RN
Sbjct: 259 VSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRN 318
Query: 266 LVSWNSIICGFSE 278
+VS S++CG++
Sbjct: 319 VVSETSMVCGYAR 331
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 101 GVLLQACGHEKDIEIGKRVH-ELVSASTQFSN----DFIINTRLITMYSLCGFPLDSRRV 155
G LL AC + D+++G++ H +++ F + D + LI MY CG D V
Sbjct: 389 GNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLV 448
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
F+ + R++ WNA++ G+ +N T+ L IF ++ + KPD+ T V+ AC
Sbjct: 449 FERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQ-KPDHVTMIGVLSACSHAGL 507
Query: 216 VGFGSGV-HGMAAKMGL--IGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNS 271
V G H M ++GL + D F ++ + G+ ++E L + MP + + V W S
Sbjct: 508 VEEGRRYFHSMRTELGLAPMKDHF--TCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGS 565
Query: 272 IICGFSENG 280
++ +G
Sbjct: 566 LLAACKVHG 574
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 130/235 (55%), Gaps = 8/235 (3%)
Query: 79 SLNKALSLLQENLHNADL---KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
+L++A+S L +++H + +A L++ C ++ + G RV+ VS S + +
Sbjct: 86 NLDRAMSYL-DSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLS-LQL 143
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
L++M+ G +D+ VF ++ RNLF WN LV G+ K L+ + L ++ +
Sbjct: 144 GNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLW-VG 202
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
+KPD +TFPCV++ CGG+ ++ G +H + G DV V NALI MY KC V
Sbjct: 203 VKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTAR 262
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ MP R+ +SWN++I G+ ENG E L M+ + PD++T+ +V+
Sbjct: 263 LVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMI--KYPVDPDLMTMTSVI 315
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 111/218 (50%), Gaps = 6/218 (2%)
Query: 93 NADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDS 152
+ DL T V+ AC D +G+++H V T+F D I+ LI MYS G ++
Sbjct: 305 DPDLMTMTSVI-TACELLGDDRLGRQIHGYV-LRTEFGRDPSIHNSLIPMYSSVGLIEEA 362
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
VF + R+L W A++SG+ + L + + ++ + PD T V+ AC
Sbjct: 363 ETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEG-IMPDEITIAIVLSACSC 421
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
+ ++ G +H +A + GL+ V+N+LI MY KC +++ +++F E+N+VSW SI
Sbjct: 422 LCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSI 481
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I G N E+ +M+ P+ +T+V VL
Sbjct: 482 ILGLRINNRCFEALFFFREMI---RRLKPNSVTLVCVL 516
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ CG ++ G+ +H V F +D + LITMY CG +R VFD + R
Sbjct: 213 VLRTCGGMPNLVRGREIHVHV-IRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNR 271
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA++SG+ +N + + L +F + + PD T VI AC + D G +
Sbjct: 272 DRISWNAMISGYFENGVCLEGLRLF-GMMIKYPVDPDLMTMTSVITACELLGDDRLGRQI 330
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + D + N+LI MY +EE +F R+LVSW ++I G+ EN
Sbjct: 331 HGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGY-ENCLM 389
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ KMM EG +PD IT+ VL
Sbjct: 390 PQKALETYKMMEA-EGIMPDEITIAIVL 416
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 112/232 (48%), Gaps = 15/232 (6%)
Query: 88 QENLHNADLKEATGVL---------LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
Q+ L + EA G++ L AC ++++G +HE+ S + N+
Sbjct: 391 QKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANS- 449
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI MY+ C + +F S +N+ W +++ G N + L F E+ LKP
Sbjct: 450 LIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIR--RLKP 507
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
++ T CV+ AC I + G +H A + G+ D F+ NA++ MY +C +E K F
Sbjct: 508 NSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQF 567
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + + SWN ++ G++E G + +L +M+ E P+ +T +++L
Sbjct: 568 FSV-DHEVTSWNILLTGYAERGKGAHATELFQRMV--ESNVSPNEVTFISIL 616
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 119/210 (56%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L ACG +E GK++H + T++ ++ + + L+ MYS C + VF +
Sbjct: 276 GSILTACGALSALEQGKQIHAYI-IRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMT 334
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+N+ W AL+ G+ +N + + +F E+ D + PD++T VI +C +A + G+
Sbjct: 335 CKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDG-IDPDDYTLGSVISSCANLASLEEGA 393
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H +A GL+ + VSNAL+ +YGKC +E+ +LF+ M + VSW +++ G+++ G
Sbjct: 394 QFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFG 453
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ DL KM+ +G PD +T + VL
Sbjct: 454 RAKETIDLFEKMLA--KGVKPDGVTFIGVL 481
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 97/181 (53%), Gaps = 3/181 (1%)
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE 189
S + ++ +IT C ++RR+F+ + R+ W +V+GFT+N L ++ L IF
Sbjct: 203 SKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRR 262
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
+ + D +TF ++ ACG ++ + G +H + +VFV +AL+ MY KC
Sbjct: 263 MRFQG-IAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCR 321
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
++ +F M +N++SW ++I G+ +NG S E+ + +M +G PD T+ +V
Sbjct: 322 SIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQ--RDGIDPDDYTLGSV 379
Query: 310 L 310
+
Sbjct: 380 I 380
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 33/176 (18%)
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE--- 189
+++N L+T Y G +RRVFD++ NLF +NAL+S L +D+ ++F
Sbjct: 42 YLLN-HLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQ 100
Query: 190 -----------------------------LSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
L +D+ ++P T ++ A + D G
Sbjct: 101 RDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGK 160
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
H ++G + FV + L+ MY K + V + + F+ + +N+V +N++I G
Sbjct: 161 QFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGL 216
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 8/177 (4%)
Query: 101 GVLLQACGHEKDIEIGKRVH--ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
G ++ +C + +E G + H LVS + ++ L+T+Y CG D+ R+FD
Sbjct: 377 GSVISSCANLASLEEGAQFHCLALVSGLMHY---ITVSNALVTLYGKCGSIEDAHRLFDE 433
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ + W ALVSG+ + + + +F ++ + +KPD TF V+ AC V
Sbjct: 434 MSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKG-VKPDGVTFIGVLSACSRAGFVEK 492
Query: 219 G-SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
G S H M G++ +I +Y + ++E + + MP + + W +++
Sbjct: 493 GRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLL 549
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
++F NAL++ + +M LF M +R++VS+N++I GFS G ++ + + ++
Sbjct: 71 NLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALL 130
Query: 294 GCEEGFIPDVITVVTVL 310
+ P IT+ T++
Sbjct: 131 QADSSVRPSRITMSTMV 147
>gi|359492699|ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Vitis vinifera]
Length = 1545
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 119/203 (58%), Gaps = 5/203 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ+C + E+G+++H + + N F+ T+L++MY+ CG ++R+VF ++ R
Sbjct: 91 LLQSCIDQGSAELGRKLHARIGLLEEM-NPFV-ETKLVSMYAKCGSLGEARKVFGEMRER 148
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL+ W+A++ +++ +++ +V+ F + D + PD F P +++ACG D G +
Sbjct: 149 NLYAWSAMIGAYSREQMWREVVQHFFFMMEDG-IVPDEFLLPKILQACGNCGDAETGKLI 207
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + + G+ ++ VSN+++A+Y KC + + FE M R+ VSWNSII G+ + G
Sbjct: 208 HSLVIRCGMNFNIRVSNSILAVYAKCGRLSCARRFFENMDYRDRVSWNSIITGYCQKGEL 267
Query: 283 CESFDLLIKMMGCEEGFIPDVIT 305
+S L KM EEG P ++T
Sbjct: 268 EKSHQLFEKMQ--EEGIEPGLVT 288
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 96/171 (56%), Gaps = 7/171 (4%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKT----RNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
LI YS G D+ + +++ ++F W +++SGF +N + L +F E+
Sbjct: 292 LINSYSQSGKCDDAMELMKKMESFRIVPDVFTWTSMISGFAQNNRRSQALELFREMLL-A 350
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
++P+ T I AC + + G +H +A K+G + D+ V N+LI MY K +E+
Sbjct: 351 GIEPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGELEDA 410
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
++F+++ ++++ +WNS+I G+ + G+ +++DL IKM E P+V+T
Sbjct: 411 RRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMH--ESDVPPNVVT 459
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 78/154 (50%), Gaps = 3/154 (1%)
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
D L R+ WN+L++G+ +N L IF ++ S ++P++ T ++ AC +
Sbjct: 486 DGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFC-IRPNSVTMLSILPACANLVAA 544
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
+HG + L ++ V+N LI Y K + +F+ + ++++SWNS+I G+
Sbjct: 545 KKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTIFQGISSKDIISWNSLIAGY 604
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+G S + DL +M + G P T ++++
Sbjct: 605 VLHGCSDSALDLFDQM--TKMGVKPSRGTFLSII 636
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 107/241 (44%), Gaps = 52/241 (21%)
Query: 81 NKALSLLQENLHNADLKEATGVL----LQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
++AL L +E L E GV + AC K ++ G +H V+ D ++
Sbjct: 338 SQALELFREMLLAG--IEPNGVTVTSGISACASLKALKKGMELHS-VAVKIGCVEDLLVG 394
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
LI MYS G D+RRVFD + ++++ WN+++ G+ + +F+++ ++++
Sbjct: 395 NSLIDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKM-HESDV 453
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
P+ T+ NA+I+ Y + ++ +
Sbjct: 454 PPNVVTW-----------------------------------NAMISGYIQNGDEDQAMD 478
Query: 257 LFEVMP-----ERNLVSWNSIICGFSENGFSCESFDLLIKMMG-CEEGFIPDVITVVTVL 310
LF M +R+ SWNS+I G+ +NG ++ + +M C P+ +T++++L
Sbjct: 479 LFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFC---IRPNSVTMLSIL 535
Query: 311 P 311
P
Sbjct: 536 P 536
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 61/128 (47%), Gaps = 10/128 (7%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI Y+ G + ++ +F + ++++ WN+L++G+ + L +F +++ +KP
Sbjct: 569 LIDTYAKSGNIVYAQTIFQGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTK-MGVKP 627
Query: 199 DNFTFPCVIKA--CGGIADVG---FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
TF +I A G+ D G F S M ++ + +A+I + G+ + E
Sbjct: 628 SRGTFLSIIYAFSLSGMVDKGKQVFSS----MMEDYQILPGLEHHSAMIDLLGRSGKLGE 683
Query: 254 MVKLFEVM 261
++ E M
Sbjct: 684 AIEFIEDM 691
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 114/196 (58%), Gaps = 5/196 (2%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-TRNLFQWNALVSGFT 175
+R+H LV + S+DF + +LI YS P S VF + +N++ WN+++ F+
Sbjct: 24 RRIHALVISLGLDSSDFF-SGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFS 82
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
KN L+ + L + +L ++++ PD +TFP VIKAC G+ D G V+ MG D+
Sbjct: 83 KNGLFPEALEFYGKLR-ESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDL 141
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
FV NAL+ MY + + ++F+ MP R+LVSWNS+I G+S +G+ E+ ++ ++
Sbjct: 142 FVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKN- 200
Query: 296 EEGFIPDVITVVTVLP 311
+PD TV +VLP
Sbjct: 201 -SWIVPDSFTVSSVLP 215
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 119/208 (57%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC D E+G V+E + F +D + L+ MYS G +R+VFD + R
Sbjct: 112 VIKACAGLFDAEMGDLVYEQI-LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR 170
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN+L+SG++ + Y + L I+ EL ++ + PD+FT V+ A G + V G G+
Sbjct: 171 DLVSWNSLISGYSSHGYYEEALEIYHELK-NSWIVPDSFTVSSVLPAFGNLLVVKQGQGL 229
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A K G+ V V+N L+AMY K + ++F+ M R+ VS+N++ICG+ +
Sbjct: 230 HGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMV 289
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
ES + ++ + + F PD++TV +VL
Sbjct: 290 EESVRMFLENL---DQFKPDLLTVSSVL 314
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 123/234 (52%), Gaps = 7/234 (2%)
Query: 80 LNKALSLLQENLHN--ADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
+ +++ + ENL DL + VL +ACGH +D+ + K ++ + F + +
Sbjct: 289 VEESVRMFLENLDQFKPDLLTVSSVL-RACGHLRDLSLAKYIYNYM-LKAGFVLESTVRN 346
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
LI +Y+ CG + +R VF+S++ ++ WN+++SG+ ++ + + +F ++ E +
Sbjct: 347 ILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLF-KMMMIMEEQ 405
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
D+ T+ +I +AD+ FG G+H K G+ D+ VSNALI MY KC V + +K+
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKI 465
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
F M + V+WN++I G + +M E +PD+ T + LP
Sbjct: 466 FSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSE--VVPDMATFLVTLP 517
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 2/159 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+ MY P D+RRVFD + R+ +N ++ G+ K E+ + + +F+E + + KP
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE--NLDQFKP 305
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D T V++ACG + D+ ++ K G + + V N LI +Y KC + +F
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVF 365
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEE 297
M ++ VSWNSII G+ ++G E+ L MM EE
Sbjct: 366 NSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE 404
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 4/199 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
D++ GK +H + D ++ LI MY+ CG DS ++F S+ T + WN ++
Sbjct: 423 DLKFGKGLHS-NGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVI 481
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
S + + L + ++ +E+ PD TF + C +A G +H + G
Sbjct: 482 SACVRFGDFATGLQVTTQMRK-SEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGY 540
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
++ + NALI MY KC +E ++FE M R++V+W +I + G ++ +
Sbjct: 541 ESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFAD 600
Query: 292 MMGCEEGFIPDVITVVTVL 310
M + G +PD + + ++
Sbjct: 601 ME--KSGIVPDSVVFIAII 617
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 126/228 (55%), Gaps = 6/228 (2%)
Query: 70 ITTLCEESKSLNKALSLL-QENLHNADLKEATGVLLQACGHEKDIEIGKRVH-ELVSAST 127
+ LC+E +L +AL LL + + +E G +L +K + G +VH V+ +
Sbjct: 31 LKQLCKEG-NLRQALRLLTSQTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGS 89
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
+D + T+L+ MY CG D+R +FD + +R +F WNAL+ + + + L ++
Sbjct: 90 LEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVY 149
Query: 188 --VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
+ LS+ + + PD T V+KA G D G VHG+A K GL FV+NALIAMY
Sbjct: 150 RAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMY 209
Query: 246 GKCAFVEEMVKLFEVMPE-RNLVSWNSIICGFSENGFSCESFDLLIKM 292
KC ++ +++FE+M + R++ SWNS+I G +NG ++ DL M
Sbjct: 210 AKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGM 257
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 110/209 (52%), Gaps = 8/209 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT- 161
+L+A G E D G VH L + F+ N LI MY+ CG + RVF+ +
Sbjct: 170 VLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANA-LIAMYAKCGILDSAMRVFELMHDG 228
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ WN+++SG +N ++ L +F + L +++T V++ C +A + G
Sbjct: 229 RDVASWNSMISGCLQNGMFLQALDLFRGMQRAV-LSMNSYTTVGVLQVCTELAQLNLGRE 287
Query: 222 VHGMAAKMGLIGDVFVS-NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H K G +V + NAL+ MY KC V+ +++F + E++ +SWNS++ + +NG
Sbjct: 288 LHAALLKSG--SEVNIQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNG 345
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTV 309
E+ + + +M+ GF PD +V++
Sbjct: 346 LYAEAIEFISEML--RGGFQPDHACIVSL 372
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 106/208 (50%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L A GH + GK VH + + +D + L+ MY C + S VFD ++ +
Sbjct: 372 LSSAVGHLGWLLNGKEVHAY-AIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIK 430
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W +++ + ++ + + L IF E + +K D +++AC G+ + +
Sbjct: 431 DHISWTTIITCYAQSSRHIEALEIFREAQKEG-IKVDPMMIGSILEACSGLETILLAKQL 489
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A + GL+ D+ V N +I +YG+C V +K+FE + ++++V+W S+I ++ +G
Sbjct: 490 HCYAIRNGLL-DLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLL 548
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M + PD + +V++L
Sbjct: 549 NEALVLFAEMQSTD--VQPDSVALVSIL 574
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 111/210 (52%), Gaps = 5/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L+AC + I + K++H A D ++ R+I +Y CG S ++F++++
Sbjct: 471 GSILEACSGLETILLAKQLH--CYAIRNGLLDLVVKNRIIDIYGECGEVYHSLKMFETVE 528
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+++ W ++++ + + L + L +F E+ S T+++PD+ ++ A GG++ + G
Sbjct: 529 QKDIVTWTSMINCYANSGLLNEALVLFAEMQS-TDVQPDSVALVSILGAIGGLSSLAKGK 587
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VHG + + + ++L+ MY C + +K+F + +++V W ++I +G
Sbjct: 588 EVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHG 647
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ DL +M+ + G PD ++ + +L
Sbjct: 648 HGKQAIDLFKRML--QTGVTPDHVSFLALL 675
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQ C + +G+ +H + S N I L+ MY+ CG + RVF + +
Sbjct: 272 VLQVCTELAQLNLGRELHAALLKSGSEVN--IQCNALLVMYTKCGRVDSALRVFREIDEK 329
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF---G 219
+ WN+++S + +N LY + + E+ +PD+ C++ + +G+ G
Sbjct: 330 DYISWNSMLSCYVQNGLYAEAIEFISEMLRGG-FQPDH---ACIVSLSSAVGHLGWLLNG 385
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
VH A K L D V N L+ MY KC ++E +F+ M ++ +SW +II ++++
Sbjct: 386 KEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQS 445
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ ++ + +EG D + + ++L
Sbjct: 446 SRHIEALEIFREAQ--KEGIKVDPMMIGSIL 474
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 119/208 (57%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +CG + +E G++VH + S++F+ N LI MY+ +D+++VFD + +
Sbjct: 359 VLTSCGSREALEQGRQVHAYTIKANLESDEFVKNG-LIDMYAKSNLLIDAKKVFDVMAEQ 417
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ +NA++ G++ E ++ L +F E+ + KP+ FTF +I A +A + G
Sbjct: 418 NVISYNAMIEGYSSQEKLSEALELFHEMRVRLQ-KPNEFTFAALITAASNLASLRHGQQF 476
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H KMGL FV+NAL+ MY KC +EE K+F R++V WNS+I +++G +
Sbjct: 477 HNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEA 536
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + +MM +EG P+ +T V VL
Sbjct: 537 EEALGMFREMM--KEGIQPNYVTFVAVL 562
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC +E G ++H V S F D + T LI YS G ++R VFD L +
Sbjct: 157 VIRACTQLGVVEKGAQLHGFVVRSG-FDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEK 215
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
W +++G+TK L +F ++ +T + PD + V+ AC + + G +
Sbjct: 216 TAVTWTTIIAGYTKCGRSAVSLELFAQMR-ETNVVPDRYVVSSVLSACSMLEFLEGGKQI 274
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G DV V N LI Y KC V+ KLF+ M +N++SW ++I G+ +N F
Sbjct: 275 HAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFD 334
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M G+ PD +VL
Sbjct: 335 WEAMKLFGEMNRL--GWKPDGFACTSVL 360
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 2/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + +E GK++H V + ++N LI Y+ C R++FD + +
Sbjct: 258 VLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNV-LIDFYTKCNRVKAGRKLFDQMVVK 316
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W ++SG+ +N + + +F E++ KPD F V+ +CG + G V
Sbjct: 317 NIISWTTMISGYMQNSFDWEAMKLFGEMNR-LGWKPDGFACTSVLTSCGSREALEQGRQV 375
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K L D FV N LI MY K + + K+F+VM E+N++S+N++I G+S
Sbjct: 376 HAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKL 435
Query: 283 CESFDLLIKM 292
E+ +L +M
Sbjct: 436 SEALELFHEM 445
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 3/194 (1%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
K +H + S S+ F+ N LI + S ++R VFD + +NL W+++VS +++
Sbjct: 69 KIIHGQIIVSGLQSDTFLANI-LINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQ 127
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF 236
+ L +FV+L + P+ F VI+AC + V G+ +HG + G DV+
Sbjct: 128 QGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVY 187
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCE 296
V +LI Y K +EE +F+ + E+ V+W +II G+++ G S S +L +M E
Sbjct: 188 VGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMR--E 245
Query: 297 EGFIPDVITVVTVL 310
+PD V +VL
Sbjct: 246 TNVVPDRYVVSSVL 259
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 117/208 (56%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L++A D+ +G+ +H +V S F + + L+ +Y+ CG + +VFD + +
Sbjct: 127 LIKAVTTMADVRLGETIHSVVIRSG-FGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK 185
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN++++GF +N + L+++ E++S +KPD FT ++ AC I + G V
Sbjct: 186 DLVAWNSVINGFAENGKPEEALALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLGKRV 244
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K+GL ++ SN L+ +Y +C VEE LF+ M ++N VSW S+I G + NGF
Sbjct: 245 HVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFG 304
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L K M EG +P IT V +L
Sbjct: 305 KEAIELF-KYMESTEGLLPCEITFVGIL 331
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 91/160 (56%), Gaps = 3/160 (1%)
Query: 152 SRRVFDSL-KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
+ +VF + K N+F WN L+ G+ + S++ E+ ++PD T+P +IKA
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
+ADV G +H + + G ++V N+L+ +Y C V K+F+ MPE++LV+WN
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S+I GF+ENG E+ L +M +G PD T+V++L
Sbjct: 192 SVINGFAENGKPEEALALYTEMNS--KGIKPDGFTIVSLL 229
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 82/183 (44%), Gaps = 5/183 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + +GKRVH + + + + L+ +Y+ CG +++ +FD + +
Sbjct: 228 LLSACAKIGALTLGKRVH-VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK 286
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGS 220
N W +L+ G N + + +F + S L P TF ++ AC G+ GF
Sbjct: 287 NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF-E 345
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSEN 279
M + + + ++ + + V++ + + MP + N+V W +++ + +
Sbjct: 346 YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 405
Query: 280 GFS 282
G S
Sbjct: 406 GDS 408
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 134/246 (54%), Gaps = 10/246 (4%)
Query: 69 EITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQ 128
I LC S L +AL LL + D + G +LQ C + +E GKR H LV AS+
Sbjct: 67 HIQRLCR-SGDLEEALGLLGSD--GVD-DRSYGAVLQLCSEVRSLEGGKRAHFLVRASSL 122
Query: 129 FSN--DFIINTRLITMYSLCGFPLDSRRVFDSL-KTRNLFQWNALVSGFTKNELYTDVLS 185
+ D ++ +L+ MY CG ++RRVFD + + ++ W AL+SG+ K + +
Sbjct: 123 GRDGMDNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVL 182
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
+F ++ ++PD +T CV+K G+ + G VHG+ K+G V NAL+A Y
Sbjct: 183 LFRKMHC-CGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFY 241
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
K ++ + +F+ MP R+++SWNS+I G + NG ++ +L ++M EG D T
Sbjct: 242 AKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMW--LEGEELDSAT 299
Query: 306 VVTVLP 311
+++VLP
Sbjct: 300 LLSVLP 305
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 125/240 (52%), Gaps = 7/240 (2%)
Query: 74 CEESKSLNKALSL-LQENLHNADLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSN 131
C + +KA+ L ++ L +L AT + +L AC + +G+ VH S T F +
Sbjct: 272 CTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGY-SVKTGFIS 330
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ L+ MYS C + ++F ++ +N+ W A+++ +T+ LY V +F E+
Sbjct: 331 QTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMG 390
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ +PD F + A G + G VHG A + G+ + V+NAL+ MY KC +
Sbjct: 391 LEGT-RPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNM 449
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
EE +F+ + ++++SWN++I G+S N + E+F L +M+ P+ +T+ +LP
Sbjct: 450 EEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEML---LQLRPNAVTMTCILP 506
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 5/195 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK VH + + L+ MY CG +++ +FD + ++++ WN L+ G++
Sbjct: 417 GKSVHGY-AIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYS 475
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+N L + S+F E+ +L+P+ T C++ A ++ + G +H A + G + D
Sbjct: 476 RNNLANEAFSLFTEML--LQLRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDD 533
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
FV+NALI MY KC + +LF+ + +NL+SW ++ G+ +G ++ L +M
Sbjct: 534 FVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMR-- 591
Query: 296 EEGFIPDVITVVTVL 310
G PD + +L
Sbjct: 592 VSGIAPDAASFSAIL 606
>gi|242051158|ref|XP_002463323.1| hypothetical protein SORBIDRAFT_02g041810 [Sorghum bicolor]
gi|241926700|gb|EER99844.1| hypothetical protein SORBIDRAFT_02g041810 [Sorghum bicolor]
Length = 576
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 113/205 (55%), Gaps = 3/205 (1%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC ++ +GK V E V S D +I + L+ MY CG ++RRVFD + +++
Sbjct: 195 ACRDAGNLVLGKWVEEWVR-SAGMEVDSLIGSALVGMYEKCGEMEEARRVFDGISNKDVV 253
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
WNA+++G+ +N + + +++F + + L+PD T V+ +C + + G + G
Sbjct: 254 AWNAMITGYAQNGMSNEAIALFHSMR-EAGLRPDKITLVGVLSSCAAVGALELGVELDGY 312
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
A GL +V+V AL+ MY KC +E+ +F MP +N SWN++ICG + NG ++
Sbjct: 313 ALHRGLYSNVYVGTALVDMYAKCGDLEKATYVFGKMPFKNEASWNALICGLAFNGRGYDA 372
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
++M E+G PD IT + VL
Sbjct: 373 IQQF-ELMRNEKGLQPDDITFIGVL 396
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 34/208 (16%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL A + + H + +D +++ LITMYS G L +RRVFD + R
Sbjct: 121 LLLAAARCPSPAVARSAHAFLEKLGLRDHDHTVHS-LITMYSCLGDHLTARRVFDGIPHR 179
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+++ + + AC ++ G V
Sbjct: 180 DVVSWNSIMKAYER-------------------------------AACRDAGNLVLGKWV 208
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
G+ D + +AL+ MY KC +EE ++F+ + +++V+WN++I G+++NG S
Sbjct: 209 EEWVRSAGMEVDSLIGSALVGMYEKCGEMEEARRVFDGISNKDVVAWNAMITGYAQNGMS 268
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M E G PD IT+V VL
Sbjct: 269 NEAIALFHSMR--EAGLRPDKITLVGVL 294
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +C +E+G + +SN ++ T L+ MY+ CG + VF + +
Sbjct: 293 VLSSCAAVGALELGVELDGYALHRGLYSNVYV-GTALVDMYAKCGDLEKATYVFGKMPFK 351
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVG 217
N WNAL+ G N D + F + ++ L+PD+ TF V+ AC G+ + G
Sbjct: 352 NEASWNALICGLAFNGRGYDAIQQFELMRNEKGLQPDDITFIGVLSACVHAGLLEYG 408
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
F +N + F + T L +F+ + EL+PD +T P ++ A H
Sbjct: 82 FSYNVALRFFASSRPDTS-LRLFLSMLR-AELRPDAYTLPFLLLAAARCPSPAVARSAHA 139
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
K+GL ++LI MY ++F+ +P R++VSWNSI+ +
Sbjct: 140 FLEKLGLRDHDHTVHSLITMYSCLGDHLTARRVFDGIPHRDVVSWNSIMKAY 191
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 106/179 (59%), Gaps = 2/179 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+ AC K++E ++VH + AS++F+ D ++ LI +Y CG L++R+VFD ++
Sbjct: 56 TFITACAQSKNLEDARKVHAHL-ASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRR 114
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+++ W +L++G+ +N++ + + + + KP+ FTF ++KA G AD G G
Sbjct: 115 KDMVSWTSLIAGYAQNDMPEEAIGLLPGMLK-GRFKPNGFTFASLLKAAGAHADSGIGRQ 173
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H +A K DV+V +AL+ MY +C ++ +F+ + +N VSWN++I GF+ G
Sbjct: 174 IHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKG 232
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 2/183 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+A G D IG+++H L + + D + + L+ MY+ CG + VFD L ++
Sbjct: 158 LLKAAGAHADSGIGRQIHAL-AVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSK 216
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WNAL+SGF + L F E+ + + +FT+ V + + + G V
Sbjct: 217 NGVSWNALISGFARKGDGETALMTFAEMLRNG-FEATHFTYSSVFSSIARLGALEQGKWV 275
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K F N L+ MY K + + K+F+ + +++LV+WN+++ F++ G
Sbjct: 276 HAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLG 335
Query: 283 CES 285
E+
Sbjct: 336 KEA 338
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
++L EL P + I AC ++ VH A GD F+ N+LI +Y K
Sbjct: 39 LDLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCK 98
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
C V E K+F+ M +++VSW S+I G+++N E+ LL M+ F P+ T
Sbjct: 99 CGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGR--FKPNGFTFA 156
Query: 308 TVL 310
++L
Sbjct: 157 SLL 159
>gi|449522252|ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37310-like [Cucumis sativus]
Length = 635
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 121/215 (56%), Gaps = 5/215 (2%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A G L+Q C +GK++H + S+ ++F+ ++LI+ YS G D+ VF
Sbjct: 5 AYGRLIQHCTDHLFFRVGKQLHARLVLSSVVPDNFL-GSKLISFYSKSGSIRDAYNVFGK 63
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVEL--SSDTELKPDNFTFPCVIKACGGI-AD 215
+ +N+F WNAL +T + ++TD+L +F L S+ T++KPD FT C +KA + ++
Sbjct: 64 IPRKNIFSWNALFISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKALASLFSN 123
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
G VH + GL D+FV NALI Y +C + +F+ MPER+ VSWN+++ G
Sbjct: 124 SGLAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDTVSWNAMLAG 183
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+S+ G S E L ++M P+ +T V+VL
Sbjct: 184 YSQGG-SYEECKELFRVMLSSVEVKPNALTAVSVL 217
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 97/175 (55%), Gaps = 1/175 (0%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
+ K VH + + F++N LIT YS C + +R +FD + R+ WNA+++G+
Sbjct: 126 LAKEVHSFILRRGLEYDIFVVNA-LITFYSRCDELVLARIMFDRMPERDTVSWNAMLAGY 184
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
++ Y + +F + S E+KP+ T V++AC D+ FG VH + + D
Sbjct: 185 SQGGSYEECKELFRVMLSSVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQIKMD 244
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL 289
V + NA+I +Y KC ++ +LFE MPE++ +++ S+I G+ +GF ++ DL
Sbjct: 245 VSLWNAVIGLYAKCGILDYARELFEEMPEKDGITYCSMISGYMVHGFVNQAMDLF 299
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 35/239 (14%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQAC D+ G VH V+ S Q D + +I +Y+ CG +R +F+ + +
Sbjct: 216 VLQACAQSNDLTFGIEVHRFVNES-QIKMDVSLWNAVIGLYAKCGILDYARELFEEMPEK 274
Query: 163 N----------------------LFQ---------WNALVSGFTKNELYTDVLSIFVELS 191
+ LF+ WNA++SG +N + IF +
Sbjct: 275 DGITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQ 334
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
S +P+ T ++ + + G +HG A + +++V+ A+I Y KC ++
Sbjct: 335 SHG-CRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIYVATAIIDSYAKCGYL 393
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ + R+L++W SII ++ +G + + L +M+ G PD +T +VL
Sbjct: 394 HGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEML--TNGIQPDQVTFTSVL 450
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L H ++ GK +H +T + + + T +I Y+ CG+ ++ VFD +K R
Sbjct: 348 ILPVFSHFSTLKGGKEIHGYAIRNT-YDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGR 406
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+L W +++S + + LS+F E+ ++ ++PD TF V+ AC
Sbjct: 407 SLIAWTSIISAYAVHGDANVALSLFYEMLTNG-IQPDQVTFTSVLAACA 454
>gi|414887968|tpg|DAA63982.1| TPA: hypothetical protein ZEAMMB73_972364 [Zea mays]
Length = 700
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 116/210 (55%), Gaps = 3/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
V+L AC ++ +G+ V E V S D +I + L+ MY CG ++RRVFD ++
Sbjct: 223 AVVLTACRDAGNLVLGRWVEEWVR-SAGMEVDSLIGSALVGMYEKCGEMAEARRVFDGIR 281
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+++ WNA+++G+ +N + + +++F + + L PD T V+ +C + + G
Sbjct: 282 HKDVVAWNAMITGYAQNGMSNEAIALFHSMR-EAGLCPDKITLVGVLSSCAAVGALKLGV 340
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+ A + GL +V+V AL+ MY KC +E+ +F MP +N SWN++ICG + NG
Sbjct: 341 ELDTYAMRRGLYNNVYVGTALVDMYAKCGDLEKATHVFGKMPFKNEASWNALICGLAFNG 400
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ ++M E+G PD IT + VL
Sbjct: 401 RGYDAIQQF-ELMRDEKGLQPDDITFIGVL 429
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 103/196 (52%), Gaps = 3/196 (1%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
+ + H L+ +D +++ LITMYS L +RRVFD + R++ WN++V +
Sbjct: 135 LARSAHALLEKIGLGDHDHTVHS-LITMYSCLDDHLAARRVFDGISHRDVVSWNSMVKAY 193
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
+ + +V + + ++ + P+ T V+ AC ++ G V G+ D
Sbjct: 194 ERAGMVAEVEGMLRSMVTEGAVAPNGVTLAVVLTACRDAGNLVLGRWVEEWVRSAGMEVD 253
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
+ +AL+ MY KC + E ++F+ + +++V+WN++I G+++NG S E+ L M
Sbjct: 254 SLIGSALVGMYEKCGEMAEARRVFDGIRHKDVVAWNAMITGYAQNGMSNEAIALFHSMR- 312
Query: 295 CEEGFIPDVITVVTVL 310
E G PD IT+V VL
Sbjct: 313 -EAGLCPDKITLVGVL 327
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
N+ + T L+ MY+ CG + VF + +N WNAL+ G N D + F +
Sbjct: 353 NNVYVGTALVDMYAKCGDLEKATHVFGKMPFKNEASWNALICGLAFNGRGYDAIQQFELM 412
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCA 249
+ L+PD+ TF V+ AC + +G + + + +I + + ++ + +
Sbjct: 413 RDEKGLQPDDITFIGVLSACVHAGLLEYGRQLFNSLTPVFKIIPRIEHYSCIVDLLARAG 472
Query: 250 FVEEMVKLFEVMP 262
+EE E MP
Sbjct: 473 HLEEAWDFIEEMP 485
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 64/146 (43%), Gaps = 1/146 (0%)
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
F +N + F + T + L ++ ++PD +T P ++ A H
Sbjct: 82 FTYNVTIRLFASSRPDTSLRLFLSMLRAEVRVRPDAYTLPFLLLAAARCPAPALARSAHA 141
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCE 284
+ K+GL ++LI MY ++F+ + R++VSWNS++ + G E
Sbjct: 142 LLEKIGLGDHDHTVHSLITMYSCLDDHLAARRVFDGISHRDVVSWNSMVKAYERAGMVAE 201
Query: 285 SFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +++ M E P+ +T+ VL
Sbjct: 202 -VEGMLRSMVTEGAVAPNGVTLAVVL 226
>gi|242047426|ref|XP_002461459.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
gi|241924836|gb|EER97980.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
Length = 568
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 124/247 (50%), Gaps = 8/247 (3%)
Query: 67 LQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSAS 126
L + + S + AL+L L D LLQAC + G+R+H + +
Sbjct: 89 LNTVLRIAASSSRPSLALALHARRLAPPD-THTYPPLLQACARLLSLRHGERIHAEAAKN 147
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT--RNLFQWNALVSGFTKNELYTDVL 184
+ F+ N+ L+ +Y CG + RVFD + RNL WN++++GF N +VL
Sbjct: 148 GLATLVFVKNS-LVHLYGACGLFESAHRVFDEIPVGERNLVSWNSMLNGFAANGRPNEVL 206
Query: 185 SIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAM 244
+IF E+ D PD FT V+ A I + G VH K+GL+ + V NALI +
Sbjct: 207 TIFREML-DVNFMPDGFTVVSVLTASAEIGALALGRRVHVYLTKVGLVENSHVGNALIDL 265
Query: 245 YGKCAFVEEMVKLFEVM-PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
Y KC VE+ ++FE M R +VSW S+I G + NGF E+ +L M E +P
Sbjct: 266 YAKCGGVEDARRVFEEMGARRTVVSWTSLIVGLAVNGFGKEALELFGIME--REKLVPTE 323
Query: 304 ITVVTVL 310
IT+V VL
Sbjct: 324 ITMVGVL 330
>gi|218201741|gb|EEC84168.1| hypothetical protein OsI_30545 [Oryza sativa Indica Group]
Length = 503
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 107/189 (56%), Gaps = 4/189 (2%)
Query: 123 VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT-RNLFQWNALVSGFTKNELYT 181
++ +T F +D + L+ MY GF D+RRVFD + RN WN L+S + KN+
Sbjct: 1 MAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCG 60
Query: 182 DVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNAL 241
D + +F E+ + ++P F F CV+ AC G ++ G VH M +MG DVF +NAL
Sbjct: 61 DAIQVFGEMVW-SGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANAL 119
Query: 242 IAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIP 301
+ MY K V+ +FE MP+ ++VSWN++I G NG + +LL++M G +P
Sbjct: 120 VDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK--SSGLVP 177
Query: 302 DVITVVTVL 310
+V + ++L
Sbjct: 178 NVFMLSSIL 186
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC ++I+ G++VH +V + D L+ MY G + +F+ +
Sbjct: 84 VVNACTGSRNIDAGRQVHAMV-VRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDS 142
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNAL+SG N + + +++ S + L P+ F ++KAC G G
Sbjct: 143 DVVSWNALISGCVLNGHDHRAIELLLQMKS-SGLVPNVFMLSSILKACAGAGAFDLGRKS 201
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
G+ L+ MY K F+++ +K+F+ M R+L+ WN++I G S G
Sbjct: 202 TGVG--------------LVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRH 247
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F + + +EG + T+ VL
Sbjct: 248 DEAFSIFYGLR--KEGLDVNRTTLAAVL 273
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+ MY+ F D+ +VFD + R+L WNAL+SG + + + SIF L + L
Sbjct: 206 LVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEG-LDV 264
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ T V+K+ + VH +A K+G I D V N LI Y KC+ + + +++F
Sbjct: 265 NRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVF 324
Query: 259 EVMPERNLVSWNSIICGFSE 278
E ++++ S+I S+
Sbjct: 325 EECSSGDIIAVTSMITALSQ 344
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 122/217 (56%), Gaps = 11/217 (5%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQ--FSNDFIINTRLITMYSLCGFPLDSRR 154
K VLL+ C K++ H+++ + N+ + T+L++++S G ++ R
Sbjct: 49 KHPAAVLLELCTSMKEL------HQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAAR 102
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VF+ + + ++ ++ G+ KN L+ + D ++KP + F ++K CG A
Sbjct: 103 VFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYD-DVKPVVYNFTYLLKVCGDNA 161
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
D+ G +HG +VF ++ MY KC +++ K+F+ MPER+LVSWN+II
Sbjct: 162 DLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIA 221
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
GFS+NGF+ ++ +L+++M +EG PD IT+VTVLP
Sbjct: 222 GFSQNGFAKKALELVLRMQ--DEGQRPDSITLVTVLP 256
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 115/209 (55%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL+ CG D++ GK +H +L++ S F+ + T ++ MY+ C D+ ++FD +
Sbjct: 153 LLKVCGDNADLKRGKEIHGQLITNS--FAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPE 210
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R+L WN +++GF++N L + + + + + +PD+ T V+ A + + G
Sbjct: 211 RDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQ-RPDSITLVTVLPAAADVGLLMVGKS 269
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG A + G V +S AL MY KC VE +F+ M ++ +VSWNS++ G+ +NG
Sbjct: 270 IHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGE 329
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ + KM+ EEG P +T++ L
Sbjct: 330 PEKAIAVFEKML--EEGIDPTGVTIMEAL 356
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 127/234 (54%), Gaps = 12/234 (5%)
Query: 82 KALSLLQENLHNADLKEATGVL----LQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
KA+++ ++ L + TGV L AC D+E GK VH+ V +D +
Sbjct: 332 KAIAVFEKMLEEG--IDPTGVTIMEALHACADLGDLERGKFVHKFVD-QLNLGSDISVMN 388
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
LI+MYS C + +F++L R WNA++ G+ +N ++ L+ F E+ S +K
Sbjct: 389 SLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKS-LGMK 447
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
PD+FT VI A ++ +HG+ + L ++FV+ AL+ MY KC + KL
Sbjct: 448 PDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKL 507
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI-PDVITVVTVL 310
F+++ +R++++WN++I G+ +G + DL KM ++G + P+ IT ++V+
Sbjct: 508 FDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKM---KKGAVEPNDITYLSVI 558
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 111/208 (53%), Gaps = 2/208 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG D+E+G+ V V N +I + LI+MYS CG + SRR+FD + +R
Sbjct: 225 VLGACGELGDLELGRWVEGFVVERGMKVNSYI-GSALISMYSKCGELVSSRRIFDGMPSR 283
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA +S + +N + + +S+F + + + P+ T V+ AC I + G +
Sbjct: 284 DFITWNAAISAYAQNGMADEAISLFHSMKENG-VDPNKVTLTAVLSACASIGALDLGKQM 342
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
A GL D+FV+ ALI MY KC +E ++F MP +N SWN++I + +G +
Sbjct: 343 DEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKA 402
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M P+ IT V++L
Sbjct: 403 KEALSLFERMSDEGGSARPNDITFVSLL 430
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 109/205 (53%), Gaps = 3/205 (1%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC + ++I + + H V ND ++TMY CG +R+VFD + ++L
Sbjct: 126 ACANLEEIRMARLAHCEV-FKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLV 184
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
WN+L+SG+ K + + +F L ++ +PD + V+ ACG + D+ G V G
Sbjct: 185 SWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGF 244
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
+ G+ + ++ +ALI+MY KC + ++F+ MP R+ ++WN+ I +++NG + E+
Sbjct: 245 VVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEA 304
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
L M E G P+ +T+ VL
Sbjct: 305 ISLFHSMK--ENGVDPNKVTLTAVL 327
>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like, partial [Brachypodium distachyon]
Length = 735
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 105/197 (53%), Gaps = 6/197 (3%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G +H S ++ F NT L+ Y+ CG D+RRVFD + R++ WN+LVS F
Sbjct: 95 GLELHAAALRSGHLADVFAGNT-LVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFL 153
Query: 176 KNELYTDVLSIFVELSSDTELKPDNF-TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
N+++ D + + P N + V+ ACG + GFG GVHG+ K GL
Sbjct: 154 ANKMFDDARQALLSMMRSG--VPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSI 211
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
V + NAL+ MYGK VE +K+FE MPERN VSWNS I F G + L M
Sbjct: 212 VNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGM-- 269
Query: 295 CEEGFIPDVITVVTVLP 311
E GF+P IT+ ++LP
Sbjct: 270 SERGFMPGSITLSSLLP 286
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 111/208 (53%), Gaps = 8/208 (3%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIIN--TRLITMYSLCGFPLDSRRVFDSLKTRN 163
ACG E++ G VH LV + D I+N L+ MY G S +VF+ + RN
Sbjct: 186 ACGVEQEGGFGLGVHGLV---LKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERN 242
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WN+ + F LY DVL++F +S + P + T ++ A + G VH
Sbjct: 243 EVSWNSAIGCFLNAGLYGDVLALFRGMS-ERGFMPGSITLSSLLPALVELGYFDLGREVH 301
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G + K + D+FV+N+L+ MY K +E+ +FE + RN+VSWN++I +NG
Sbjct: 302 GYSIKRAMELDIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAES 361
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+F L+IKM ++G P+ IT+V +LP
Sbjct: 362 EAFGLVIKMQ--KDGECPNSITLVNLLP 387
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 100/179 (55%), Gaps = 3/179 (1%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
++G+ VH S D + L+ MY+ G + VF+ ++ RN+ WNA+++
Sbjct: 295 DLGREVHG-YSIKRAMELDIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIAN 353
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
+N ++ + +++ D E P++ T ++ AC +A + G +H + + GL+
Sbjct: 354 LVQNGAESEAFGLVIKMQKDGEC-PNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMF 412
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
D+F+SNALI MY KC + +F+ + E++ VS+N++I G+S++ +S ES +L ++
Sbjct: 413 DLFISNALIDMYAKCGQLRLAQSIFD-LSEKDDVSYNTLILGYSQSPWSFESLNLFKQL 470
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 107/208 (51%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC ++ GK++H S T D I+ LI MY+ CG ++ +FD L +
Sbjct: 385 LLPACSRMASLKTGKQIHAW-SIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFD-LSEK 442
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ +N L+ G++++ + L++F +LSS ++ D +F + AC ++ G +
Sbjct: 443 DDVSYNTLILGYSQSPWSFESLNLFKQLSS-VGIEYDAISFMGALTACTNLSSFKQGKEI 501
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ + L F++N L+ +Y K ++ K+F + E+++ SWN++I G+ +G
Sbjct: 502 HGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQI 561
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F L M + G D ++ + VL
Sbjct: 562 DAAFHLFDLMK--DHGVTYDHVSYIAVL 587
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
L+ R+ F WN+L + L T+ L ++ + + + PD+ TFP + A A
Sbjct: 34 LRLRSAFLWNSLSRALSSASLPTEALLVYNHMLR-SGVSPDDRTFPFALHAAAAAAQAHP 92
Query: 219 GSGV--HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G+ H A + G + DVF N L+A Y C + ++F+ MP R++VSWNS++ F
Sbjct: 93 AKGLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSF 152
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
N ++ L+ MM G +V ++V+V+P
Sbjct: 153 LANKMFDDARQALLSMM--RSGVPVNVASLVSVVP 185
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 111/208 (53%), Gaps = 2/208 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG D+E+G+ V V N +I + LI+MYS CG + SRR+FD + +R
Sbjct: 225 VLGACGELGDLELGRWVEGFVVERGMKVNSYI-GSALISMYSKCGELVSSRRIFDGMPSR 283
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA +S + +N + + +S+F + + + P+ T V+ AC I + G +
Sbjct: 284 DFITWNAAISAYAQNGMADEAISLFHSMKENG-VDPNKVTLTAVLSACASIGALDLGKQM 342
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
A GL D+FV+ ALI MY KC +E ++F MP +N SWN++I + +G +
Sbjct: 343 DEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKA 402
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M P+ IT V++L
Sbjct: 403 KEALSLFERMSDEGGSARPNDITFVSLL 430
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 109/205 (53%), Gaps = 3/205 (1%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC + ++I + + H V ND ++TMY CG +R+VFD + ++L
Sbjct: 126 ACANLEEIRMARLAHCEV-FKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLV 184
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
WN+L+SG+ K + + +F L ++ +PD + V+ ACG + D+ G V G
Sbjct: 185 SWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGF 244
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
+ G+ + ++ +ALI+MY KC + ++F+ MP R+ ++WN+ I +++NG + E+
Sbjct: 245 VVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEA 304
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
L M E G P+ +T+ VL
Sbjct: 305 ISLFHSMK--ENGVDPNKVTLTAVL 327
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 122/217 (56%), Gaps = 11/217 (5%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQ--FSNDFIINTRLITMYSLCGFPLDSRR 154
K VLL+ C K++ H+++ + N+ + T+L++++S G ++ R
Sbjct: 49 KHPAAVLLELCTSMKEL------HQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAAR 102
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VF+ + + ++ ++ G+ KN L+ + D ++KP + F ++K CG A
Sbjct: 103 VFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYD-DVKPVVYNFTYLLKVCGDNA 161
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
D+ G +HG +VF ++ MY KC +++ K+F+ MPER+LVSWN+II
Sbjct: 162 DLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIA 221
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
GFS+NGF+ ++ +L+++M +EG PD IT+VTVLP
Sbjct: 222 GFSQNGFAKKALELVLRMQ--DEGQRPDSITLVTVLP 256
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 115/209 (55%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL+ CG D++ GK +H +L++ S F+ + T ++ MY+ C D+ ++FD +
Sbjct: 153 LLKVCGDNADLKRGKEIHGQLITNS--FAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPE 210
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R+L WN +++GF++N L + + + + + +PD+ T V+ A + + G
Sbjct: 211 RDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQ-RPDSITLVTVLPAAADVGLLMVGKS 269
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG A + G V +S AL MY KC VE +F+ M ++ +VSWNS++ G+ +NG
Sbjct: 270 IHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGE 329
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ + KM+ EEG P +T++ L
Sbjct: 330 PEKAIAVFEKML--EEGIDPTGVTIMEAL 356
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 127/234 (54%), Gaps = 12/234 (5%)
Query: 82 KALSLLQENLHNADLKEATGVL----LQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
KA+++ ++ L + TGV L AC D+E GK VH+ V +D +
Sbjct: 332 KAIAVFEKMLEEG--IDPTGVTIMEALHACADLGDLERGKFVHKFVD-QLNLGSDISVMN 388
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
LI+MYS C + +F++L R WNA++ G+ +N ++ L+ F E+ S +K
Sbjct: 389 SLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKS-LGMK 447
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
PD+FT VI A ++ +HG+ + L ++FV+ AL+ MY KC + KL
Sbjct: 448 PDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKL 507
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI-PDVITVVTVL 310
F+++ +R++++WN++I G+ +G + DL KM ++G + P+ IT ++V+
Sbjct: 508 FDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKM---KKGAVEPNDITYLSVI 558
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 106/179 (59%), Gaps = 3/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + LITMYS CG +RRVFD + ++L WN+++SG+++ D + +F E+
Sbjct: 160 DGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMR 219
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
D +PD T ++ ACG + D+G GS + G + + + FV +ALI MYGKC +
Sbjct: 220 -DAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDL 278
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F+ M ++++V+WN++I G+++NG S E+ L M E G PD IT+V VL
Sbjct: 279 SSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMR--ESGVNPDKITLVGVL 335
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 118/209 (56%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG D+ +G + V + N F+ + LI MY CG +RRVFD + +
Sbjct: 233 ILGACGDLGDLGLGSWIEGFVVENEMDLNSFV-GSALIGMYGKCGDLSSARRVFDRMVKK 291
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA+++G+ +N + + + +F + ++ + PD T V+ AC I + FG +
Sbjct: 292 DVVTWNAMITGYAQNGVSDEAIILFSGMR-ESGVNPDKITLVGVLSACASIGALDFGKWL 350
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
A++ GL D++VS ALI MY KC +++ +++FE MP++N VSWN++I + +G
Sbjct: 351 DTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRP 410
Query: 283 CESFDLLIKMMGCEEGFI-PDVITVVTVL 310
ES L K M E G + P+ I+ + VL
Sbjct: 411 QESLSLF-KRMSKEGGAVRPNDISFIGVL 438
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 115/234 (49%), Gaps = 11/234 (4%)
Query: 77 SKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
S+ KAL+ Q + L + LL+ C K ++ ++H + + +F+++
Sbjct: 12 SRHFTKALAKSQRHAQQT-LTDKLLSLLKQCTSTKSLQ---QIHTQMIINAIHKPNFLLH 67
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
R I + L +F + N + +N ++ G T ++ F D +
Sbjct: 68 -RFIDLKDFNNASL----LFSQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGI 122
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
+P+NFT+P V AC + + G H K GL D V ++LI MY +C + +
Sbjct: 123 RPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARR 182
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ + E++LVSWNS+I G+S G++ ++ L +M + GF PD +T+V++L
Sbjct: 183 VFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMR--DAGFEPDEMTLVSIL 234
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 6/184 (3%)
Query: 84 LSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMY 143
S ++E+ N D GVL AC ++ GK + + ++ ND ++T LI MY
Sbjct: 316 FSGMRESGVNPDKITLVGVL-SACASIGALDFGKWL-DTYASERGLQNDIYVSTALIDMY 373
Query: 144 SLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT-ELKPDNFT 202
+ CG D+ RVF+ + +N WNA++S + + LS+F +S + ++P++ +
Sbjct: 374 AKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDIS 433
Query: 203 FPCVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV 260
F V+ AC G+ D G M++ GL+ + + ++ + + V E E
Sbjct: 434 FIGVLSACVHAGLVDEG-RQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEK 492
Query: 261 MPER 264
MPE+
Sbjct: 493 MPEK 496
>gi|357117671|ref|XP_003560587.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Brachypodium distachyon]
Length = 602
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 6/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G ++ A G+ + G H V + I+ + + MY+ CG L++RRVFD ++
Sbjct: 245 GSMMTALGNLRRARQGSEAHAQV-VTRGLCGSVIVESSTLDMYAKCGMMLEARRVFDEMQ 303
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN W+AL+ G+ +N Y VL +F ++ + + D+++ V++AC G++ V G
Sbjct: 304 VRNAVSWSALLGGYCQNAEYEKVLVLFRQMDKEYD---DSYSLGTVLRACAGLSSVKPGK 360
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H + G DV V +AL+ +Y KC V+ ++FE RN ++WN++I GF++NG
Sbjct: 361 EIHCRFLRNGGWRDVVVESALVDLYAKCGAVDYACRVFEASSVRNTITWNAMIGGFAQNG 420
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + +L +M+ EG PD I+ + VL
Sbjct: 421 HAERAINLFNQMV--REGARPDYISFIGVL 448
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 103/204 (50%), Gaps = 5/204 (2%)
Query: 81 NKALSLLQENLHNADL----KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
+AL L+ L AD A ++AC +D +G VH ++ +++D I+
Sbjct: 119 RRALQSLRSMLAGADGVFPNAHALSAAVKACAVLRDRNVGACVHGVILVRG-YADDDIVL 177
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
+ L+ MY P D+R+ F+ + T + + +L+S F +N+ + + + F + + +
Sbjct: 178 SALVDMYGHTASPGDARKAFEEMCTPDGICYTSLISAFVRNDWFEEAVRWFRTMVTRNGV 237
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
+PD TF ++ A G + GS H GL G V V ++ + MY KC + E +
Sbjct: 238 EPDGCTFGSMMTALGNLRRARQGSEAHAQVVTRGLCGSVIVESSTLDMYAKCGMMLEARR 297
Query: 257 LFEVMPERNLVSWNSIICGFSENG 280
+F+ M RN VSW++++ G+ +N
Sbjct: 298 VFDEMQVRNAVSWSALLGGYCQNA 321
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 3/203 (1%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
++ K L L ++ D + G +L+AC ++ GK +H + + D ++
Sbjct: 319 QNAEYEKVLVLFRQMDKEYDDSYSLGTVLRACAGLSSVKPGKEIHCRFLRNGGW-RDVVV 377
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
+ L+ +Y+ CG + RVF++ RN WNA++ GF +N +++F ++ +
Sbjct: 378 ESALVDLYAKCGAVDYACRVFEASSVRNTITWNAMIGGFAQNGHAERAINLFNQMVREGA 437
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+PD +F V+ AC V G + M+ G+ + N ++ + + +EE
Sbjct: 438 -RPDYISFIGVLFACSHNGMVEQGRNYFNSMSKDYGIAPGIEHYNCIVDLLSRVELLEEA 496
Query: 255 VKLFEVMPERNLVSWNSIICGFS 277
L P N S + I G S
Sbjct: 497 EDLINKSPFSNDSSLWAAILGAS 519
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA-FVEEMVKLFEVMPERNLVSWNSIICGF 276
G +H AA+ GL+ D +V+NAL+A Y + + ++ F+ +P R++V+ +SI+ F
Sbjct: 53 LGYCLHARAARAGLLADRYVANALLAFYVRLPRHLPYALRAFDDLPHRDVVAHSSILAAF 112
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDV 303
G + L M+ +G P+
Sbjct: 113 LRAGLPRRALQSLRSMLAGADGVFPNA 139
>gi|242053565|ref|XP_002455928.1| hypothetical protein SORBIDRAFT_03g027395 [Sorghum bicolor]
gi|241927903|gb|EES01048.1| hypothetical protein SORBIDRAFT_03g027395 [Sorghum bicolor]
Length = 537
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 128/255 (50%), Gaps = 26/255 (10%)
Query: 79 SLNKALSLLQENLHNADLKEATGV--------------------LLQACGHEKDIEIGKR 118
SL+ AL+ + H L++A + LLQ C + G++
Sbjct: 31 SLHAALASFSQQAHEGGLRDAFALVARAERQSSPAAVGPEVYTSLLQCCVTAGSLRAGRQ 90
Query: 119 VHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL--KTRNLFQWNALVSGFT 175
VH LV + + + T+L Y+ CG D+ R +L + RN F W A++ ++
Sbjct: 91 VHAALVKRGPYYCRNAYVGTKLTVFYARCGALDDAERALGALPERHRNAFAWAAVIGLWS 150
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+ L+ L+ FV + + + DNF P V+KAC G+ G G VHG A K G+ V
Sbjct: 151 RAGLHARALAGFVAML-EAGVPADNFVAPTVLKACAGLGLSGAGRAVHGYAWKAGVAECV 209
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+V ++L+ YGKC VE+ +F+ MPER +V+WN+++ + NG E+ +L +M
Sbjct: 210 YVMSSLVDFYGKCGEVEDARAVFDAMPERTVVTWNTMLMAYIHNGRIDEAVELFYEMR-- 267
Query: 296 EEGFIPDVITVVTVL 310
EG +P +++++ L
Sbjct: 268 VEGVLPTRVSILSFL 282
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 123/266 (46%), Gaps = 17/266 (6%)
Query: 45 KEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLL 104
+ +++ + +A S GLH +++L +++L+ + + T +L
Sbjct: 135 RHRNAFAWAAVIGLWSRAGLH-----------ARALAGFVAMLEAGVPADNFVAPT--VL 181
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNL 164
+AC G+ VH + +++++ L+ Y CG D+R VFD++ R +
Sbjct: 182 KACAGLGLSGAGRAVHGYAWKAGVAECVYVMSS-LVDFYGKCGEVEDARAVFDAMPERTV 240
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
WN ++ + N + + +F E+ + L P + + A + + G H
Sbjct: 241 VTWNTMLMAYIHNGRIDEAVELFYEMRVEGVL-PTRVSILSFLSASADLEAIDGGRQGHA 299
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCE 284
+A GL DV + +++I Y K VE +FE M ER+ V+WN +I G+ ++G +
Sbjct: 300 VAVSSGLEMDVILGSSMINFYCKVGLVEAAEAVFEQMKERDAVTWNLMIAGYFQDGQIDK 359
Query: 285 SFDLLIKMMGCEEGFIPDVITVVTVL 310
+FD +M+ F D +T+ +++
Sbjct: 360 AFDTCRRMLEANLKF--DCVTLASII 383
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 103/235 (43%), Gaps = 22/235 (9%)
Query: 85 SLLQENLHNADLKEAT---------GVL---------LQACGHEKDIEIGKRVHELVSAS 126
++L +HN + EA GVL L A + I+ G++ H V+ S
Sbjct: 245 TMLMAYIHNGRIDEAVELFYEMRVEGVLPTRVSILSFLSASADLEAIDGGRQGHA-VAVS 303
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
+ D I+ + +I Y G + VF+ +K R+ WN +++G+ ++
Sbjct: 304 SGLEMDVILGSSMINFYCKVGLVEAAEAVFEQMKERDAVTWNLMIAGYFQDGQIDKAFDT 363
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
+ + LK D T +I AC + G HG A + GL D V++ LI MY
Sbjct: 364 CRRML-EANLKFDCVTLASIIMACLKSCIMLVGIAAHGYAVRNGLHSDKTVASGLIDMYA 422
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIP 301
+E ++F M RNLV W +I + + G + E+ +LL +M EG P
Sbjct: 423 SAGRIEHARRVFNAMCPRNLVIWKVMISAYVDCGINSEARNLLNQMQ--LEGISP 475
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 117/209 (55%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL C + G+ VH E++ S Q ++ I + L+TMY CG D+ VF ++K
Sbjct: 756 LLSGCSVVGSYDFGRTVHAEVIKRSMQ--SNVAIQSALLTMYYKCGSTEDADSVFYTMKE 813
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ W ++++GF +N + D L +F + + +K D+ VI A G+ +V G
Sbjct: 814 RDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEG-VKADSDVMTSVISAGLGLENVELGHL 872
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG A K GL DVFV+ +L+ MY K F E +F MP +NLV+WNS+I +S NG
Sbjct: 873 IHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGL 932
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S +LL +++ + GF D +++ TVL
Sbjct: 933 PEMSINLLPQIL--QHGFYLDSVSITTVL 959
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 106/205 (51%), Gaps = 4/205 (1%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC H + ++ G++VH V F +D + T L+TMY+ G D+++VFD + + +
Sbjct: 658 ACSHGEVLDFGRQVHCDV-IKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVE 716
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
NA++S F N D L ++ ++ + E D+FT ++ C + FG VH
Sbjct: 717 LRNAMISAFIGNGRAYDALGLYNKMKAG-ETPVDSFTISSLLSGCSVVGSYDFGRTVHAE 775
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
K + +V + +AL+ MY KC E+ +F M ER++V+W S+I GF +N ++
Sbjct: 776 VIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDA 835
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
DL M +EG D + +V+
Sbjct: 836 LDLFRAME--KEGVKADSDVMTSVI 858
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 109/217 (50%), Gaps = 5/217 (2%)
Query: 94 ADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSR 153
AD T V+ G E ++E+G +H + +D + L+ MYS GF +
Sbjct: 849 ADSDVMTSVISAGLGLE-NVELGHLIHGF-AIKRGLESDVFVACSLVDMYSKFGFAESAE 906
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
VF S+ +NL WN+++S ++ N L +++ ++ D+ + V+ A +
Sbjct: 907 MVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHG-FYLDSVSITTVLVAVSSV 965
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
A + G +H ++ + D+ V NALI MY KC ++ +FE MP RNLV+WNS+I
Sbjct: 966 AALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMI 1025
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G+ +G +CE L K M E PD +T + ++
Sbjct: 1026 AGYGSHG-NCEEAVRLFKEMKRSET-APDEVTFLALI 1060
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 11/230 (4%)
Query: 67 LQEITTLCEESKSLNKALSLLQENLHNA--DLKEATGVLLQACGHEKDIEIGKRVHELVS 124
++EI L ++ K ++AL L + H+A K LL+ C ++ G+ +H +
Sbjct: 410 VEEIKALVQQGK-YSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASI- 467
Query: 125 ASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR-----NLFQWNALVSGFTKNEL 179
+ +D I T LI MY CG + +VFD + ++ WN ++ G+ K
Sbjct: 468 VTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGH 527
Query: 180 YTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSN 239
+ + L+ F + + ++PD ++ V+ C ++ G +HG + GD ++
Sbjct: 528 FEEGLAQFCRMQ-ELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLET 586
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSENGFSCESFDL 288
ALI MY C+ E LF + R N+V+WN +I GF ENG +S +L
Sbjct: 587 ALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLEL 636
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 3/196 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++L C G+++H + F D + T LI MYS C P+++ +F L+
Sbjct: 552 IVLGICNRLSWYMAGRQIHGYI-IRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLEN 610
Query: 162 R-NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R N+ WN ++ GF +N ++ L ++ L+ + K + +F AC + FG
Sbjct: 611 RSNIVAWNVMIGGFVENGMWEKSLELY-SLAKNENCKLVSASFTGAFTACSHGEVLDFGR 669
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH KM D +V +L+ MY K VE+ K+F+ + ++ + N++I F NG
Sbjct: 670 QVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNG 729
Query: 281 FSCESFDLLIKMMGCE 296
+ ++ L KM E
Sbjct: 730 RAYDALGLYNKMKAGE 745
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 10/131 (7%)
Query: 188 VELSSDT---ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAM 244
+EL S T L FTFP ++K C ++++ G +H MGL D +++ +LI M
Sbjct: 426 LELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINM 485
Query: 245 YGKCAFVEEMVKLFEVMPER-----NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
Y KC + +++F+ M E ++ WN +I G+ + G E +M E G
Sbjct: 486 YVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQ--ELGI 543
Query: 300 IPDVITVVTVL 310
PD ++ VL
Sbjct: 544 RPDGYSLSIVL 554
>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 122/205 (59%), Gaps = 7/205 (3%)
Query: 110 EKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNA 169
K +++ ++ H + S S + ++ T+LI Y++C P SR VFDSL+ +N+F WN+
Sbjct: 36 HKSLKLTRQSHSRI-LSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNS 94
Query: 170 LVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM 229
L++G+ KN LY + +F ++ S +++ PD+FT + K + + G +HG + ++
Sbjct: 95 LINGYAKNRLYNEAFQLFNQMCS-SDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRI 153
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG---FSCESF 286
G + D V+N++++MY KC EE K+F+ M RN SWN +I G++ +G F E++
Sbjct: 154 GFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETW 213
Query: 287 DLLIKMMGCEEGFIPDVITVVTVLP 311
+ +K M +E PD T+ ++LP
Sbjct: 214 E-FVKQMQMDE-VRPDAYTISSLLP 236
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 113/216 (52%), Gaps = 13/216 (6%)
Query: 103 LLQAC-GHEKDIEIGKRVH------ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV 155
LL C G + + G+ +H ELV +D + LI MYS + RRV
Sbjct: 234 LLPLCDGDKGKWDYGRELHCYIVKNELVLG---LDSDVHLGCCLIDMYSRSNKVVVGRRV 290
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
FD +K RN+F W A+++G+ +N + LS+F ++ ++P+ + V+ AC +
Sbjct: 291 FDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSG 350
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE-RNLVSWNSIIC 274
+ G +HG A + L +V + NALI MY KC ++ ++FE ++ +SW+S+I
Sbjct: 351 LLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMIS 410
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G+ +G E+ L KM+ + G PD+IT V +L
Sbjct: 411 GYGLHGKGQEAILLYDKML--QAGIRPDMITTVGIL 444
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 13/205 (6%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF- 174
GK +H S F +D ++ +++MY CG +SR+VFD + RN WN L++G+
Sbjct: 143 GKSIHG-KSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYA 201
Query: 175 -TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG---FGSGVHGMAAK-- 228
+ N + + FV+ E++PD +T ++ C G D G +G +H K
Sbjct: 202 VSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDG--DKGKWDYGRELHCYIVKNE 259
Query: 229 --MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
+GL DV + LI MY + V ++F+ M RN+ SW ++I G+ ENG S E+
Sbjct: 260 LVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEAL 319
Query: 287 DLLIKMMGCEEGFIPDVITVVTVLP 311
L + M +G P+ +++V+VLP
Sbjct: 320 SLF-RDMQVIDGIEPNRVSLVSVLP 343
>gi|449438472|ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
gi|449493172|ref|XP_004159212.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
Length = 605
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 117/210 (55%), Gaps = 8/210 (3%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L ACG+ + G+ +H V A FS + + + L+ MY CG S+R+FD +
Sbjct: 268 GSVLTACGNLGRLRQGEEIHAKVIA-YGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRMS 326
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN W+AL++ + N Y +++F E+ + D ++F VI+AC G+A V G
Sbjct: 327 NRNSVSWSALLAVYCHNGDYEKAVNLFREMK-----EVDLYSFGTVIRACAGLAAVTPGK 381
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H + G DV V +AL+ +Y KC + ++F+ MP RNL++WNS+I GF++NG
Sbjct: 382 EIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTRNLITWNSMIHGFAQNG 441
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S + + M+ +EG PD I+ + +L
Sbjct: 442 SSGIAIQIFEAMI--KEGIKPDCISFIGLL 469
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 102/190 (53%), Gaps = 1/190 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC ++ +GK H +V F ++ +I + LI MY D+R++FD L
Sbjct: 168 VIKACSEIGNLVLGKCFHGVV-VRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEP 226
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W ++S FT+N+LY + L F L PDN+TF V+ ACG + + G +
Sbjct: 227 DPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEI 286
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G G+V ++L+ MYGKC VE+ +LF+ M RN VSW++++ + NG
Sbjct: 287 HAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDY 346
Query: 283 CESFDLLIKM 292
++ +L +M
Sbjct: 347 EKAVNLFREM 356
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 119/239 (49%), Gaps = 5/239 (2%)
Query: 44 FKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQE-NLHNADLKEA--T 100
K S S +++ ST L +I C+ S LN AL LL +L+++ + +
Sbjct: 5 LKRHCSSSFTSQNFKYSTHPSIKLSQILQFCK-SGLLNDALHLLNSIDLYDSRINKPLLY 63
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
LLQ C G++ H V S ++ F+ N+ L + L L +RRVFD L
Sbjct: 64 ASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLF 123
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+++ W ++++G+ + + +F ++ D+ ++P+ FT VIKAC I ++ G
Sbjct: 124 VKDVVSWASMITGYVREGKSGIAIELFWDML-DSGIEPNGFTLSAVIKACSEIGNLVLGK 182
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
HG+ + G + + ++LI MYG+ + + +LF+ + E + V W ++I F+ N
Sbjct: 183 CFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRN 241
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 115/211 (54%), Gaps = 4/211 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V + C KD++ G+ +H ++ + D I+ T LITMY+ C +R+ FD +
Sbjct: 63 VAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGK 122
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE--LKPDNFTFPCVIKACGGIADVGFG 219
+ L WNAL++G+++N + L I+ ++ S + +KPD TF + AC + D+ G
Sbjct: 123 KTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQG 182
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+ G D V NALI MY KC +E K+F+ + R++++WN++I G+++
Sbjct: 183 REIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQ 242
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + ++ +L +M + P+V+T + +L
Sbjct: 243 GAATQALELFQRMGPNDPK--PNVVTFIGLL 271
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 114/208 (54%), Gaps = 5/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC DI G+ + E + ++ +++D I+ LI MYS CG +R+VFD LK R+
Sbjct: 170 LYACSVVGDISQGREI-EARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRD 228
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN ++SG+ K T L +F + + + KP+ TF ++ AC + D+ G +H
Sbjct: 229 VIAWNTMISGYAKQGAATQALELFQRMGPN-DPKPNVVTFIGLLTACTNLEDLEQGRAIH 287
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKC-AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ G D+ + N L+ MY KC + +EE ++FE + R++++WN +I + + G +
Sbjct: 288 RKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQA 347
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ D+ +M E P+ IT+ VL
Sbjct: 348 KDALDIFKQMQ--LENVAPNEITLSNVL 373
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 115/209 (55%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLD-SRRVFDSLKT 161
LL AC + +D+E G+ +H V + +D +I L+ MY+ C L+ +R+VF+ L+T
Sbjct: 270 LLTACTNLEDLEQGRAIHRKVKEHG-YESDLVIGNVLLNMYTKCSSSLEEARQVFERLRT 328
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ WN L+ + + D L IF ++ + + P+ T V+ AC + G
Sbjct: 329 RDVITWNILIVAYVQYGQAKDALDIFKQMQLEN-VAPNEITLSNVLSACAVLGAKRQGKA 387
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH + A DV + N+L+ MY +C +++ V +F + +++LVSW+++I ++++G
Sbjct: 388 VHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGH 447
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S + +++ +EG D +T+V+ L
Sbjct: 448 SRTGLEHFWELL--QEGLAADDVTMVSTL 474
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 3/171 (1%)
Query: 142 MYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF 201
MY CG D+ VF +++ N W +V+ F +N Y + L + + + L+PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEG-LRPDGA 59
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIG-DVFVSNALIAMYGKCAFVEEMVKLFEV 260
F I C D+ G +H M + L+ D+ + ALI MY +C +E K F+
Sbjct: 60 MFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDE 119
Query: 261 MPERNLVSWNSIICGFSENGFSCESFDLLIKMMG-CEEGFIPDVITVVTVL 310
M ++ LV+WN++I G+S NG + + M+ EG PD IT + L
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSAL 170
>gi|224107543|ref|XP_002314516.1| predicted protein [Populus trichocarpa]
gi|222863556|gb|EEF00687.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 117/204 (57%), Gaps = 7/204 (3%)
Query: 110 EKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNA 169
K +++ ++ H + S F+ + + T+LI+ Y++ G P SR VFDSL ++++ WN+
Sbjct: 40 HKSLKLTQQCHARI-LSLGFTQNPFLATKLISAYAIFGVPALSRLVFDSLHFKSVYLWNS 98
Query: 170 LVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM 229
L++GF KN Y + F ++ L D++T + K C I D+ G +HG + K
Sbjct: 99 LINGFVKNRAYNEAFGWFYQMCCRGVLL-DDYTLATMSKVCHEIGDLNAGKLIHGKSLKT 157
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG---FSCESF 286
G + DV V+N+L++MY KC E +KLF+ MPERN+ SWN I+ G++++G F E
Sbjct: 158 GFVLDVIVANSLMSMYSKCGGFGECLKLFDEMPERNVGSWNVILSGYADSGDRNFDKEVS 217
Query: 287 DLLIKMMGCEEGFIPDVITVVTVL 310
+ M EG PD TV ++L
Sbjct: 218 GFVKDMQ--IEGLKPDAFTVSSLL 239
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 108/213 (50%), Gaps = 7/213 (3%)
Query: 103 LLQAC-GHEKDIEIGKRVHELV---SASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
LL C GH + G+ +H + + + + LI MYS RRVFD
Sbjct: 238 LLTLCNGHMGKRDHGRELHGFIVRIELAVGSGTEVHLGCCLIDMYSRSNRVDVGRRVFDR 297
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
++ RN++ W A+++G +N + L +F E+ ++P+ + V+ AC +A +
Sbjct: 298 MECRNVYAWTAMINGHVQNGALEEGLVLFHEMQVRDGVEPNKVSLVSVLPACSAVAGLTG 357
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFS 277
+HG A + DV + NALI MY KC ++ ++FE R+ +SW+S+I G+
Sbjct: 358 VKQIHGYAIRKQFNNDVSLCNALIDMYSKCGSLDHAKQVFEFGSFRRDPISWSSMISGYG 417
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+G E+ + KM+ + G PD+IT+V VL
Sbjct: 418 LHGKGEEAVFVYNKML--QLGNKPDMITIVGVL 448
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 9/214 (4%)
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNL 164
+ C D+ GK +H S T F D I+ L++MYS CG + ++FD + RN+
Sbjct: 136 KVCHEIGDLNAGKLIHG-KSLKTGFVLDVIVANSLMSMYSKCGGFGECLKLFDEMPERNV 194
Query: 165 FQWNALVSGF--TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG-IADVGFGSG 221
WN ++SG+ + + + +S FV+ LKPD FT ++ C G + G
Sbjct: 195 GSWNVILSGYADSGDRNFDKEVSGFVKDMQIEGLKPDAFTVSSLLTLCNGHMGKRDHGRE 254
Query: 222 VHGMAAKMGL-IG---DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
+HG ++ L +G +V + LI MY + V+ ++F+ M RN+ +W ++I G
Sbjct: 255 LHGFIVRIELAVGSGTEVHLGCCLIDMYSRSNRVDVGRRVFDRMECRNVYAWTAMINGHV 314
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+NG + E +L M +G P+ +++V+VLP
Sbjct: 315 QNG-ALEEGLVLFHEMQVRDGVEPNKVSLVSVLP 347
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 117/210 (55%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L ACG E GK++H ++ T + ++ + + L+ MYS C + VF +
Sbjct: 282 GSILTACGALAASEEGKQIHAYIT-RTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT 340
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN+ W A++ G+ +N + + F E+ D +KPD+FT VI +C +A + G+
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDG-IKPDDFTLGSVISSCANLASLEEGA 399
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H +A GL+ + VSNAL+ +YGKC +E+ +LF+ M + VSW +++ G+++ G
Sbjct: 400 QFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFG 459
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ DL KM+ G PD +T + VL
Sbjct: 460 KAKETIDLFEKML--VNGLKPDGVTFIGVL 487
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
I +RV + + A T ++ LIT C D++ +F + R+ W +V+
Sbjct: 197 IRDARRVFQEMEAKT-----VVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVT 251
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G T+N L + L +F + ++ + D +TF ++ ACG +A G +H +
Sbjct: 252 GLTQNGLQLEALDVFRRMRAEG-VGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYE 310
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+VFV +AL+ MY KC + +F M RN++SW ++I G+ +N S E+ +M
Sbjct: 311 DNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEM 370
Query: 293 MGCEEGFIPDVITVVTVL 310
+G PD T+ +V+
Sbjct: 371 Q--MDGIKPDDFTLGSVI 386
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 110/284 (38%), Gaps = 71/284 (25%)
Query: 90 NLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSAS-TQFSNDFIINTRLITMYSLCGF 148
N + A L A G G + + VH L+ + Q F++N L+T Y+ G
Sbjct: 10 NRYAAILSSAAGD-----GGRTGVRVAGAVHCLILKTFLQAPPTFLLN-HLLTAYAKSGR 63
Query: 149 PLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS---------------- 192
+RRVFD + NLF NAL+S + L D+ +F +
Sbjct: 64 LARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSST 123
Query: 193 ---------------DTELKPDNFTFPCVIKACGGIADVGFGSGVH-------------- 223
+ ++P T +I ++D G VH
Sbjct: 124 GSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFV 183
Query: 224 -----GMAAKMGLIGD------------VFVSNALIAMYGKCAFVEEMVKLFEVMPERNL 266
M AKMGLI D V + N LI +C +E+ LF++M +R+
Sbjct: 184 GSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDS 243
Query: 267 VSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++W +++ G ++NG E+ D+ +M EG D T ++L
Sbjct: 244 ITWTTMVTGLTQNGLQLEALDVFRRMRA--EGVGIDQYTFGSIL 285
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
Query: 101 GVLLQACGHEKDIEIGKRVH--ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
G ++ +C + +E G + H LVS ++ ++ L+T+Y CG D+ R+FD
Sbjct: 383 GSVISSCANLASLEEGAQFHCLALVSGLMRY---ITVSNALVTLYGKCGSIEDAHRLFDE 439
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADV 216
+ + W ALV+G+ + + + +F ++ + LKPD TF V+ AC G+ +
Sbjct: 440 MSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNG-LKPDGVTFIGVLSACSRAGLVEK 498
Query: 217 G 217
G
Sbjct: 499 G 499
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 116/208 (55%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E GK VH + + +D ++ L+ MY+ CG D+ VF ++ +
Sbjct: 358 ILHACACTGLLENGKDVHNYIK-ENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVK 416
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN ++ G++KN L + L++FVE+ ++ KP++ T C++ AC +A + G +
Sbjct: 417 DIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS--KPNSITMACILPACASLAALERGQEI 474
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + G D V+NAL+ MY KC + LF+++PE++LVSW +I G+ +G+
Sbjct: 475 HGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYG 534
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +M G PD ++ +++L
Sbjct: 535 SEAIAAFNEMR--NSGIEPDEVSFISIL 560
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 119/233 (51%), Gaps = 9/233 (3%)
Query: 82 KALSLLQENLH---NADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
K L L ++ L N DL V+ C + + +G+ +H + F + +N
Sbjct: 234 KGLDLFEQMLLLGINTDLATMVSVV-AGCSNTGMLLLGRALHG-YAIKASFGKELTLNNC 291
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+ MYS G + +VF+++ R++ W ++++G+ + L + +F E+ + + P
Sbjct: 292 LLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEG-ISP 350
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D FT ++ AC + G VH + + D+FVSNAL+ MY KC + + +F
Sbjct: 351 DIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVF 410
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
M +++VSWN++I G+S+N E+ +L ++M + P+ IT+ +LP
Sbjct: 411 SEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM---QYNSKPNSITMACILP 460
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 130/295 (44%), Gaps = 62/295 (21%)
Query: 69 EITTLCEESKSLNKALSLLQENLHNADLKEATGV-LLQACGHEKDIEIGKRVHELVSAST 127
EI CE +L +A+ L+ ++ DL+ T +LQ C K I+ G+R+H ++ S
Sbjct: 74 EICRFCELG-NLRRAMELINQS-PKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQ-SN 130
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDS----------------------------- 158
D ++ ++L+ MY CG + RR+FD
Sbjct: 131 DVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLF 190
Query: 159 --------------------LKTRNLFQWNALVSGFTKNELYTDVLSIFVE---LSSDTE 195
L R++ WN+++SG+ N L L +F + L +T+
Sbjct: 191 KRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTD 250
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
L T V+ C + G +HG A K ++ ++N L+ MY K + +
Sbjct: 251 LA----TMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAI 306
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++FE M ER++VSW S+I G++ G S S L +M +EG PD+ T+ T+L
Sbjct: 307 QVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEME--KEGISPDIFTITTIL 359
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 127/238 (53%), Gaps = 8/238 (3%)
Query: 73 LCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSND 132
C+E+ K + L N L A + AC K + G+++H V S +S D
Sbjct: 426 FCKEALETFKDMQLFGIWPDNIGLASA----ISACAGIKAMRQGQQIHSRVYVSG-YSAD 480
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
I L+ +Y+ CG ++ +F++++ ++ WN +VSGF ++ LY + L +F+++
Sbjct: 481 VSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMY- 539
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+K + FTF I A +AD+ G +H K G + V+NALI++YGKC +E
Sbjct: 540 QAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIE 599
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ F M ERN VSWN+II S++G+ E+ DL +M +EG P+ +T + VL
Sbjct: 600 DAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMK--QEGLKPNDVTFIGVL 655
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 113/206 (54%), Gaps = 4/206 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C + +I +G+++H L+S T F +D ++ LI MYS G+ +RR+ + L+ +
Sbjct: 351 LLRTCTYAGEINLGEQIH-LLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAK 409
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W ++++G+ ++E + L F ++ + PDN I AC GI + G +
Sbjct: 410 DVVSWTSMIAGYVQHEFCKEALETFKDMQL-FGIWPDNIGLASAISACAGIKAMRQGQQI 468
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G DV + NAL+ +Y +C +E LFE + ++ ++WN ++ GF+++G
Sbjct: 469 HSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLY 528
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVT 308
E+ ++ IKM + G +V T V+
Sbjct: 529 EEALEVFIKMY--QAGVKYNVFTFVS 552
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 108/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC D+ GK++H + S D+II L+ +Y CG +++ +F S
Sbjct: 250 LLAACASIGDLNKGKQLHSYL-LKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRT 308
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN ++ + + +F ++ + ++P+ FT+PC+++ C ++ G +
Sbjct: 309 NVVLWNLMLVAYGQISDLAKSFDLFCQMVA-AGVRPNEFTYPCLLRTCTYAGEINLGEQI 367
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H ++ K G D++VS LI MY K ++++ ++ EV+ +++VSW S+I G+ ++ F
Sbjct: 368 HLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFC 427
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + M G PD I + + +
Sbjct: 428 KEALETFKDMQ--LFGIWPDNIGLASAI 453
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 3/182 (1%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
D I LI +Y+ G +RRVF+ L R+ W A++SG+ +N L + + ++
Sbjct: 73 LGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYH 132
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
++ + + P + V+ AC A G VH K G + V NALIA+Y +
Sbjct: 133 QMHC-SGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRF 191
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
+ ++F MP + V++N++I ++ G + ++ +M G+ PD +T+ +
Sbjct: 192 GSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMR--LSGWTPDCVTIAS 249
Query: 309 VL 310
+L
Sbjct: 250 LL 251
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC E G+ VH V S + ++ LI +Y G + RVF +
Sbjct: 149 VLSACTKAALFEQGRLVHAQVYKQGSCS-ETVVGNALIALYLRFGSLSLAERVFSEMPYC 207
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ +N L+S + L IF E+ + PD T ++ AC I D+ G +
Sbjct: 208 DRVTFNTLISRHAQCGNGESALEIFEEMRL-SGWTPDCVTIASLLAACASIGDLNKGKQL 266
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G+ D + +L+ +Y KC + E +++F+ N+V WN ++ + +
Sbjct: 267 HSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDL 326
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+SFDL +M+ G P+ T +L
Sbjct: 327 AKSFDLFCQMVAA--GVRPNEFTYPCLL 352
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 83/172 (48%), Gaps = 4/172 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ A + DI+ GK++H V + S + N LI++Y CG D++ F + RN
Sbjct: 554 ISASANLADIKQGKQIHATVIKTGCTSETEVANA-LISLYGKCGSIEDAKMQFFEMSERN 612
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV- 222
WN +++ +++ + L +F ++ + LKP++ TF V+ AC + V G G
Sbjct: 613 HVSWNTIITSCSQHGWGLEALDLFDQMKQEG-LKPNDVTFIGVLAACSHVGLVEEGLGYF 671
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
M+++ G+ ++ + G+ ++ K E MP N + W +++
Sbjct: 672 KSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLL 723
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 4/144 (2%)
Query: 168 NALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC-GGIADVGFGSGVHGMA 226
N ++GF +E +LS+F + F C ++ C G + +H A
Sbjct: 10 NKSLTGFLAHEDPEKLLSLFAAKVRQCR-GLGSVDFACALRECRGSVKHWPLVPVIHAKA 68
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
GL D N LI +Y K V+ ++FE + R+ VSW +++ G++ NG E+
Sbjct: 69 ITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAV 128
Query: 287 DLLIKMMGCEEGFIPDVITVVTVL 310
L M C G +P + +VL
Sbjct: 129 GLY-HQMHC-SGVVPTPYVLSSVL 150
>gi|357467943|ref|XP_003604256.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505311|gb|AES86453.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 670
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 117/208 (56%), Gaps = 7/208 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L++C I K++H L + T D + + +YS+CG + + +VFD + R
Sbjct: 190 VLKSCARFSGIAEVKQIHTL-AVKTDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVR 248
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W L+SG+ K L+ D +++F+ + ++ P+ TF ++ ACG + + G G+
Sbjct: 249 DVVSWTGLISGYMKAGLFNDAVALFLRM----DVAPNAATFVSILGACGKLGCLNLGKGI 304
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ +K ++ VSN L+ MY KC V + +LF+ +PE+++VSW S+I G +
Sbjct: 305 HGLVSKYPHGKELVVSNTLMDMYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCP 364
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
ES DL +M+G GF PD + + +VL
Sbjct: 365 QESLDLFYEMLG--SGFEPDGVILTSVL 390
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 8/210 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG + +GK +H LVS + +++ L+ MY C D++R+FD + +
Sbjct: 288 ILGACGKLGCLNLGKGIHGLVSKYPH-GKELVVSNTLMDMYVKCESVTDAKRLFDEIPEK 346
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +++SG + + + L +F E+ + +PD V+ AC + + +G V
Sbjct: 347 DIVSWTSMISGLVQYQCPQESLDLFYEMLG-SGFEPDGVILTSVLSACASLGLLDYGRWV 405
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + DV + +LI MY KC +E ++F ++P +N+ +WN+ I G + NG
Sbjct: 406 HEYIDHSRIKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSKNIRTWNAYIGGLAINGHG 465
Query: 283 CESFDLLIKMMG--CEEGFIPDVITVVTVL 310
E+ +K G E G P+ IT + V
Sbjct: 466 QEA----LKQFGYLVESGTRPNEITFLAVF 491
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 99/213 (46%), Gaps = 13/213 (6%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMY----SLCGFPLDSRRVFD 157
VLL D+ K++H + ST ND ++ T+ + + +P + + FD
Sbjct: 86 VLLDFIQRCNDLRSFKQIHAQLLRSTLVDNDLVV-TKAANFFGKHVTDIRYPCNFLKQFD 144
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
+ + F N ++SG+ + I+ + + PD +T P V+K+C + +
Sbjct: 145 --WSFSSFPCNLIISGYGAGNFPWAAIRIYRWVVGNG-FVPDVYTVPAVLKSCARFSGIA 201
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
+H +A K L D+FV N+ + +Y C K+F+ MP R++VSW +I G+
Sbjct: 202 EVKQIHTLAVKTDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYM 261
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ G ++ L ++M P+ T V++L
Sbjct: 262 KAGLFNDAVALFLRM-----DVAPNAATFVSIL 289
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 121/231 (52%), Gaps = 8/231 (3%)
Query: 83 ALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITM 142
AL+L + +L D LLQAC + G+ +H + S F+ N+ L+ +
Sbjct: 109 ALALHRRHLAPPD-THTYPPLLQACARLLALRYGEGLHAEACKNGLVSLVFVKNS-LVHL 166
Query: 143 YSLCGFPLDSRRVFDSLKT--RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDN 200
Y CG + RVFD + RNL WN++++GF N +VL++F E+ + E PD
Sbjct: 167 YGACGLFESAHRVFDEIPPPERNLVSWNSVLNGFAANGRPNEVLTVFREML-EVEFAPDG 225
Query: 201 FTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF-E 259
FT V+ AC I + G VH AK+GL+G+ NALI +Y KC V++ K+F E
Sbjct: 226 FTVVSVLTACAEIGVLALGRRVHVFVAKVGLVGNAHAGNALIDLYAKCGGVDDARKMFGE 285
Query: 260 VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ R +VSW S+I G + NGF ++ L M E +P IT+V VL
Sbjct: 286 MGVGRTVVSWTSLIVGLAVNGFGMDALQLFSMME--REKLMPTEITMVGVL 334
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 119/208 (57%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC ++ G+++H+ + + ++D + T L++MY+ CG +D+R VF+ + +
Sbjct: 413 ILGACSRPSALKQGRQIHDRIIKAGYITDDRV-RTALLSMYAKCGSLMDARNVFERISKQ 471
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WNA+++ + ++E Y + ++ F L + +KPD+ TF ++ C + G V
Sbjct: 472 NVVAWNAMITAYVQHEKYDNAVATFQALLKEG-IKPDSSTFTSILNVCKSPDALELGKWV 530
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ + G D+ + NAL++M+ C + + LF MPER+LVSWN+II GF ++G +
Sbjct: 531 QSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGEN 590
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+FD KMM E G PD IT +L
Sbjct: 591 QFAFDYF-KMMQ-ESGVKPDQITFTGLL 616
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 119/208 (57%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC K+++ G + L+ + + D + T LI M+ CG D+ +VF++L R
Sbjct: 211 MLNACADAKNVDKGGELFSLI-LNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRR 269
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L W ++++G ++ + ++F ++ + ++PD F ++KAC + G V
Sbjct: 270 DLITWTSMITGLARHRQFKQACNLF-QVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRV 328
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H ++GL +++V AL++MY KC +E+ +++F ++ RN+VSW ++I GF+++G
Sbjct: 329 HARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRM 388
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F KM+ E G P+ +T +++L
Sbjct: 389 EEAFLFFNKMI--ESGIEPNRVTFMSIL 414
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 132/245 (53%), Gaps = 6/245 (2%)
Query: 66 FLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSA 125
FL ++ + S+++ LS+ ++ H ++ LLQ C K++ G+R+H +
Sbjct: 75 FLNRLSKAGQLSEAMLVLLSV--DSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKF 132
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
S + F+ N LI+MY+ CG ++++FD + ++++ WN L+ G+ ++ Y +
Sbjct: 133 SKIQPDIFMWNM-LISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFR 191
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
+ ++ D +KPD +TF ++ AC +V G + + G D+FV ALI M+
Sbjct: 192 LHEQMVQDG-VKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMH 250
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
KC V++ +K+F +P R+L++W S+I G + + ++ +L M EEG PD +
Sbjct: 251 IKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVME--EEGVQPDKVA 308
Query: 306 VVTVL 310
V++L
Sbjct: 309 FVSLL 313
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 111/211 (52%), Gaps = 10/211 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C +E+GK V L+ F +D I L++M+ CG + + +F+ + R
Sbjct: 514 ILNVCKSPDALELGKWVQSLI-IRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPER 572
Query: 163 NLFQWNALVSGFTK---NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+L WN +++GF + N+ D + ++ ++ +KPD TF ++ AC + G
Sbjct: 573 DLVSWNTIIAGFVQHGENQFAFD----YFKMMQESGVKPDQITFTGLLNACASPEALTEG 628
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H + + L DV V LI+MY KC +++ +F +P++N+ SW S+I G++++
Sbjct: 629 RRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQH 688
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ +L +M +EG PD IT V L
Sbjct: 689 GRGKEALELFCQMQ--QEGVKPDWITFVGAL 717
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 113/211 (53%), Gaps = 10/211 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+AC H + +E GKRVH + + + T L++MY+ CG D+ VF+ +K R
Sbjct: 312 LLKACNHPEALEQGKRVHARMK-EVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGR 370
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A+++GF ++ + F ++ ++ ++P+ TF ++ AC + + G +
Sbjct: 371 NVVSWTAMIAGFAQHGRMEEAFLFFNKMI-ESGIEPNRVTFMSILGACSRPSALKQGRQI 429
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN--- 279
H K G I D V AL++MY KC + + +FE + ++N+V+WN++I + ++
Sbjct: 430 HDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKY 489
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +F L+K EG PD T ++L
Sbjct: 490 DNAVATFQALLK-----EGIKPDSSTFTSIL 515
>gi|356551872|ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Glycine max]
Length = 945
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 117/203 (57%), Gaps = 5/203 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQAC + I +G+ +H + + N F+ T+L++MY+ CG ++R+VFD ++ R
Sbjct: 90 LLQACIDKDCILVGRELHTRIGLVRKV-NPFV-ETKLVSMYAKCGHLDEARKVFDEMRER 147
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NLF W+A++ +++ + +V+ +F ++ L PD+F P V+KACG D+ G +
Sbjct: 148 NLFTWSAMIGACSRDLKWEEVVELFYDMMQHGVL-PDDFLLPKVLKACGKFRDIETGRLI 206
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + + G+ + V+N+++A+Y KC + K+F M ERN VSWN II G+ + G
Sbjct: 207 HSLVIRGGMCSSLHVNNSILAVYAKCGEMSCAEKIFRRMDERNCVSWNVIITGYCQRGEI 266
Query: 283 CESFDLLIKMMGCEEGFIPDVIT 305
++ M EEG P ++T
Sbjct: 267 EQAQKYFDAMQ--EEGMEPGLVT 287
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 93/178 (52%), Gaps = 21/178 (11%)
Query: 139 LITMYSL---CGFPLDSRRVFDSLK-TRNLFQWNALVSGFTKN-------ELYTDVLSIF 187
LI YS C +D R +S T +++ W +++SGFT+ +L D+L +
Sbjct: 291 LIASYSQLGHCDIAMDLMRKMESFGITPDVYTWTSMISGFTQKGRINEAFDLLRDMLIVG 350
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
VE P++ T AC + + GS +H +A K ++ D+ + N+LI MY K
Sbjct: 351 VE--------PNSITIASAASACASVKSLSMGSEIHSIAVKTSMVDDILIGNSLIDMYAK 402
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
+E +F+VM ER++ SWNSII G+ + GF ++ +L +KM E P+V+T
Sbjct: 403 GGDLEAAQSIFDVMLERDVYSWNSIIGGYCQAGFCGKAHELFMKMQ--ESDSPPNVVT 458
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 77/148 (52%), Gaps = 3/148 (2%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN+L+SGF +N L IF ++ + + P+ T ++ AC + +
Sbjct: 491 NVASWNSLISGFLQNRQKDKALQIFRQMQF-SNMAPNLVTVLTILPACTNLVAAKKVKEI 549
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A + L+ ++ VSN I Y K + K+F+ + ++++SWNS++ G+ +G S
Sbjct: 550 HCCATRRNLVSELSVSNTFIDSYAKSGNIMYSRKVFDGLSPKDIISWNSLLSGYVLHGCS 609
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ DL +M ++G P +T+ +++
Sbjct: 610 ESALDLFDQMR--KDGLHPSRVTLTSII 635
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 82/175 (46%), Gaps = 8/175 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQ--FSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L AC ++ K+V E+ +T+ ++ ++ I Y+ G + SR+VFD L
Sbjct: 533 ILPAC---TNLVAAKKVKEIHCCATRRNLVSELSVSNTFIDSYAKSGNIMYSRKVFDGLS 589
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+++ WN+L+SG+ + L +F ++ D L P T +I A V G
Sbjct: 590 PKDIISWNSLLSGYVLHGCSESALDLFDQMRKDG-LHPSRVTLTSIISAYSHAEMVDEGK 648
Query: 221 -GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
++ + + D+ +A++ + G+ + + ++ + MP E N W +++
Sbjct: 649 HAFSNISEEYQIRLDLEHYSAMVYLLGRSGKLAKALEFIQNMPVEPNSSVWAALL 703
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 116/209 (55%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++ACG ++ + K VHEL + S F D I + LI +Y+ G+ D++ +FD L R
Sbjct: 183 VIKACGGLNNVPLCKMVHEL-ARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVR 241
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN +++G+ KN + L F E+ + +KP++ +F C++ C V G +
Sbjct: 242 DCILWNVMLNGYVKNGDFNSALGTFQEMRNSC-VKPNSVSFVCLLSVCATRGIVRAGIQL 300
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ + G D V+N +I MY KC + + K+F++MP+ + V+WN +I G+ +NGF+
Sbjct: 301 HGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFT 360
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ L M+ G D IT + LP
Sbjct: 361 DEAVALFKAMV--TSGVKLDSITFASFLP 387
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 122/239 (51%), Gaps = 8/239 (3%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATG---VLLQACGHEKDIEIGKRVHELVSASTQFSND 132
++ N AL QE + N+ +K + LL C + G ++H LV S F +D
Sbjct: 255 KNGDFNSALGTFQE-MRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSG-FESD 312
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
+ +ITMYS CG D+R++FD + + WN L++G+ +N + +++F + +
Sbjct: 313 PTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVT 372
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ +K D+ TF + + + + VH + G+ DV++ +AL+ +Y K VE
Sbjct: 373 -SGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVE 431
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
K F+ ++ ++I G+ NG + E+ +L ++ +EG +P+ +T+ +VLP
Sbjct: 432 MACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLI--QEGMVPNCLTMASVLP 488
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 79/146 (54%), Gaps = 1/146 (0%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ +R++ MY LC D +F L+ WN L+ GF+ + L F + +
Sbjct: 113 LGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLG-S 171
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+ PD +TFP VIKACGG+ +V VH +A MG D+F+ ++LI +Y ++ +
Sbjct: 172 NVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDA 231
Query: 255 VKLFEVMPERNLVSWNSIICGFSENG 280
LF+ +P R+ + WN ++ G+ +NG
Sbjct: 232 KYLFDELPVRDCILWNVMLNGYVKNG 257
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 114/234 (48%), Gaps = 8/234 (3%)
Query: 78 KSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIIN 136
++LN L+QE + L A+ +L AC +++GK +H +++ + N +
Sbjct: 463 EALNLFRWLIQEGMVPNCLTMAS--VLPACAALASLKLGKELHCDILKKGLE--NVCQVG 518
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
+ + MY+ G + + F + ++ WN ++ F++N + +F ++ + +
Sbjct: 519 SSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGT-SGT 577
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
K D+ + + AC + +G +H + I D FV++ LI MY KC +
Sbjct: 578 KFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARS 637
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F++M +N VSWNSII + +G E DL +M+ E G PD +T + ++
Sbjct: 638 VFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMV--EAGIQPDHVTFLVIM 689
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 86/173 (49%), Gaps = 6/173 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + + GK +H V ++ S+ F+ +T LI MYS CG +R VFD + +N
Sbjct: 588 LSACANYPALYYGKELHCFVVRNSFISDTFVAST-LIDMYSKCGKLALARSVFDMMDWKN 646
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGSG 221
WN++++ + + + L +F E+ + ++PD+ TF ++ ACG G+ D G
Sbjct: 647 EVSWNSIIAAYGNHGRPRECLDLFHEMV-EAGIQPDHVTFLVIMSACGHAGLVDEGI-YY 704
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
M + G+ + ++ +YG+ + E + MP + +W S++
Sbjct: 705 FRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLL 757
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 117/209 (55%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL C + G+ VH E++ S Q ++ I + L+TMY CG D+ VF ++K
Sbjct: 351 LLSGCSVVGSYDFGRTVHAEVIKRSMQ--SNVAIQSALLTMYYKCGSTEDADSVFYTMKE 408
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ W ++++GF +N + D L +F + + +K D+ VI A G+ +V G
Sbjct: 409 RDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEG-VKADSDVMTSVISAGLGLENVELGHL 467
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG A K GL DVFV+ +L+ MY K F E +F MP +NLV+WNS+I +S NG
Sbjct: 468 IHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGL 527
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S +LL +++ + GF D +++ TVL
Sbjct: 528 PEMSINLLPQIL--QHGFYLDSVSITTVL 554
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 106/205 (51%), Gaps = 4/205 (1%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC H + ++ G++VH V F +D + T L+TMY+ G D+++VFD + + +
Sbjct: 253 ACSHGEVLDFGRQVHCDV-IKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVE 311
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
NA++S F N D L ++ ++ + E D+FT ++ C + FG VH
Sbjct: 312 LRNAMISAFIGNGRAYDALGLYNKMKAG-ETPVDSFTISSLLSGCSVVGSYDFGRTVHAE 370
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
K + +V + +AL+ MY KC E+ +F M ER++V+W S+I GF +N ++
Sbjct: 371 VIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDA 430
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
DL M +EG D + +V+
Sbjct: 431 LDLFRAME--KEGVKADSDVMTSVI 453
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 109/217 (50%), Gaps = 5/217 (2%)
Query: 94 ADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSR 153
AD T V+ G E ++E+G +H + +D + L+ MYS GF +
Sbjct: 444 ADSDVMTSVISAGLGLE-NVELGHLIHGF-AIKRGLESDVFVACSLVDMYSKFGFAESAE 501
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
VF S+ +NL WN+++S ++ N L +++ ++ D+ + V+ A +
Sbjct: 502 MVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHG-FYLDSVSITTVLVAVSSV 560
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
A + G +H ++ + D+ V NALI MY KC ++ +FE MP RNLV+WNS+I
Sbjct: 561 AALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMI 620
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G+ +G +CE L K M E PD +T + ++
Sbjct: 621 AGYGSHG-NCEEAVRLFKEMKRSET-APDEVTFLALI 655
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 3/182 (1%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR-NLFQWNALVSGF 174
G+++H + F D + T LI MYS C P+++ +F L+ R N+ WN ++ GF
Sbjct: 161 GRQIHGYI-IRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGF 219
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
+N ++ L ++ L+ + K + +F AC + FG VH KM D
Sbjct: 220 VENGMWEKSLELY-SLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDD 278
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
+V +L+ MY K VE+ K+F+ + ++ + N++I F NG + ++ L KM
Sbjct: 279 PYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKA 338
Query: 295 CE 296
E
Sbjct: 339 GE 340
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 69 EITTLCEESKSLNKALSLLQENLHNA--DLKEATGVLLQACGHEKDIEIGKRVHELVSAS 126
+I L ++ K ++AL L + H+A K LL+ C ++ G+ +H + +
Sbjct: 26 KIKALVQQGK-YSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASI-VT 83
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR-----NLFQWNALVSGFTKNELYT 181
+D I T LI MY CG + +VFD + ++ WN ++ G+ K +
Sbjct: 84 MGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFE 143
Query: 182 DVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNAL 241
+ L+ F + ++ G +HG + GD ++ AL
Sbjct: 144 EGLAQFCRMQE--------------------LSWYMAGRQIHGYIIRNMFEGDPYLETAL 183
Query: 242 IAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSENGFSCESFDL 288
I MY C+ E LF + R N+V+WN +I GF ENG +S +L
Sbjct: 184 IGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLEL 231
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 6/146 (4%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
SR+ + +T N+ + + Y+ L + + + + L FTFP ++K C
Sbjct: 8 SRKFYSLRQTEVSPSINSKIKALVQQGKYSQALELHSK-TPHSALTTAKFTFPSLLKTCA 66
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-----NL 266
++++ G +H MGL D +++ +LI MY KC + +++F+ M E ++
Sbjct: 67 SLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDI 126
Query: 267 VSWNSIICGFSENGFSCESFDLLIKM 292
WN +I G+ + G E +M
Sbjct: 127 TVWNPVIDGYFKYGHFEEGLAQFCRM 152
>gi|413954745|gb|AFW87394.1| hypothetical protein ZEAMMB73_238054 [Zea mays]
Length = 430
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 117/211 (55%), Gaps = 6/211 (2%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+LLQ C + +D +GKR+H + A T F + T+L+ Y+ G ++++FD +
Sbjct: 40 LLLQECVNRRDPRLGKRIHARMVA-TGFRCSAYVATKLLIFYAKIGHLGCAQKMFDGMPQ 98
Query: 162 RNLFQWNALVSGFTKN--ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
R++ WNA++SG + E + +F + ++ L PD FTF V+ AC +A +G G
Sbjct: 99 RSVVAWNAMISGCARGSGEAQERAVELFSAMRAEG-LAPDQFTFASVLCACARLAALGHG 157
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
VHG+A K + G+VF ++AL+ MY KC+ E+ ++F PERN+ W ++I G +
Sbjct: 158 RRVHGVAVKSDVGGNVFANSALVDMYLKCSCPEDARRVFAAAPERNVTMWTAVISGHGQQ 217
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ +M GF P+ +T + VL
Sbjct: 218 GCVDEALAFFDRMAA--SGFRPNDVTFLAVL 246
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 4/132 (3%)
Query: 181 TDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNA 240
T LS V L + + P T+ +++ C D G +H G +V+
Sbjct: 16 TGHLSKAVSLMCRSPVCPGAGTYALLLQECVNRRDPRLGKRIHARMVATGFRCSAYVATK 75
Query: 241 LIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC--EEG 298
L+ Y K + K+F+ MP+R++V+WN++I G + S E+ + +++ EG
Sbjct: 76 LLIFYAKIGHLGCAQKMFDGMPQRSVVAWNAMISGCARG--SGEAQERAVELFSAMRAEG 133
Query: 299 FIPDVITVVTVL 310
PD T +VL
Sbjct: 134 LAPDQFTFASVL 145
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 108/192 (56%), Gaps = 3/192 (1%)
Query: 119 VHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNE 178
+H V S +S+ FI RL++MY G+ D++R+FD + R+L WN+L+SG +
Sbjct: 161 IHARVIKSLNYSDGFI-GDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRG 219
Query: 179 LYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVS 238
L+ F + +++ +P+ T V+ AC + + G +HG+ K+G+ G V
Sbjct: 220 YLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVV 279
Query: 239 NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEG 298
N+LI MYGK F++ +LFE MP R+LVSWNS++ + NG++ + DL M G
Sbjct: 280 NSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMK--RAG 337
Query: 299 FIPDVITVVTVL 310
PD T+V +L
Sbjct: 338 INPDQATMVALL 349
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC ++ GK +H +V ++N+ LI MY GF + ++F+ + R
Sbjct: 247 VVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNS-LINMYGKLGFLDAASQLFEEMPVR 305
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG--- 219
+L WN++V N + +F L + PD T +++AC D G G
Sbjct: 306 SLVSWNSMVVIHNHNGYAEKGMDLF-NLMKRAGINPDQATMVALLRAC---TDTGLGRQA 361
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H + G D+ ++ AL+ +Y K + +FE + +R+ ++W +++ G++ +
Sbjct: 362 ESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVH 421
Query: 280 GFSCES---FDLLIKMMGCEEGFIPDVITVVTVL 310
E+ FDL++K EG D +T +L
Sbjct: 422 ACGREAIKLFDLMVK-----EGVEVDHVTFTHLL 450
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C ++ GK VH V ++ F +D +I L+ MY+ CG +RR+FD + R
Sbjct: 80 LLKRCTQLGKLKEGKLVHFHV-LNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHR 138
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W ++++G+ +N+ +D L +F + SD +P+ FT ++K CG +A G +
Sbjct: 139 DMVSWTSMITGYAQNDRASDALLLFPRMLSDGA-EPNEFTLSSLVKCCGYMASYNCGRQI 197
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G +VFV ++L+ MY +C ++ E + +F+ + +N VSWN++I G++ G
Sbjct: 198 HACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEG 257
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L ++M EG+ P T +L
Sbjct: 258 EEALALFVRMQ--REGYRPTEFTYSALL 283
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 114/213 (53%), Gaps = 14/213 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L++ CG+ G+++H SN F+ + L+ MY+ CG+ ++ VFD L +
Sbjct: 181 LVKCCGYMASYNCGRQIHACCWKYGCHSNVFV-GSSLVDMYARCGYLGEAMLVFDKLGCK 239
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WNAL++G+ + + L++FV + + +P FT+ ++ +C + + G +
Sbjct: 240 NEVSWNALIAGYARKGEGEEALALFVRMQREG-YRPTEFTYSALLSSCSSMGCLEQGKWL 298
Query: 223 HG--MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H M + L+G +V N L+ MY K + + K+F+ + + ++VS NS++ G++++G
Sbjct: 299 HAHLMKSSQKLVG--YVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHG 356
Query: 281 FSCES---FDLLIKMMGCEEGFIPDVITVVTVL 310
E+ FD +I+ G P+ IT ++VL
Sbjct: 357 LGKEAAQQFDEMIRF-----GIEPNDITFLSVL 384
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
L+PD + ++K C + + G VH D+ + N+L+ MY +C +E
Sbjct: 70 LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGAR 129
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+LF+ MP R++VSW S+I G+++N + ++ L +M+ +G P+ T+ +++
Sbjct: 130 RLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRML--SDGAEPNEFTLSSLV 182
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 3/173 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL +C +E GK +H + S+Q ++ NT L+ MY+ G D+ +VFD L
Sbjct: 281 ALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNT-LLHMYAKSGSIRDAEKVFDKLVK 339
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ N+++ G+ ++ L + F E+ ++P++ TF V+ AC + G
Sbjct: 340 VDVVSCNSMLIGYAQHGLGKEAAQQFDEMIR-FGIEPNDITFLSVLTACSHARLLDEGKH 398
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
G+ K + V ++ + G+ +++ E MP E + W +++
Sbjct: 399 YFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALL 451
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 108/195 (55%), Gaps = 3/195 (1%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+++H L+ F + + T L+ MY+ C + RVFD + RNL WN+++ GF
Sbjct: 264 GQQLHSLIHKHG-FDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFF 322
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
N LY + +F ++ + + P+ + V+ AC + + FG VHG+ K GL+
Sbjct: 323 HNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLT 382
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+V N+L+ MY KC F +E VKLF+ + +R++V+WN ++ GF +N E+ + M
Sbjct: 383 YVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMR-- 440
Query: 296 EEGFIPDVITVVTVL 310
EG +PD + TVL
Sbjct: 441 REGILPDEASFSTVL 455
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 109/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + + G++VH +V +++N+ L+ MY C F + ++F + R
Sbjct: 353 VLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNS-LMDMYFKCRFFDEGVKLFQCVGDR 411
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN LV GF +N+ + + + F + + L PD +F V+ + +A + G+ +
Sbjct: 412 DVVTWNVLVMGFVQNDKFEEACNYFWVMRREGIL-PDEASFSTVLHSSASLAALHQGTAI 470
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K+G + ++ + +LI MY KC + + ++FE + + N++SW ++I + +G +
Sbjct: 471 HDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCA 530
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L M+ EG P +T V VL
Sbjct: 531 NQVIELFEHML--SEGIEPSHVTFVCVL 556
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 5/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT- 161
LL + ++ ++H + + S F+ N LI +Y+ CG + +F
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNN-LINLYAKCGCLNQALLLFSITHHH 206
Query: 162 -RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ + W +L++ + ++ LS+F ++ P+ FTF ++ A V G
Sbjct: 207 FKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPY-PNQFTFSSILSASAATMMVLHGQ 265
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H + K G ++FV AL+ MY KCA + V++F+ MPERNLVSWNS+I GF N
Sbjct: 266 QLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNN 325
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + ++ E+ IP+ ++V +VL
Sbjct: 326 LYDRAVGVFKDVLR-EKTVIPNEVSVSSVL 354
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G +H+ + N I+ + LITMY+ CG +D+ +VF+ ++ N+ W A++S +
Sbjct: 467 GTAIHDQIIKLGYVKNMCILGS-LITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQ 525
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+ V+ +F + S+ ++P + TF CV+ AC V G K+ +
Sbjct: 526 LHGCANQVIELFEHMLSEG-IEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPG 584
Query: 236 FVSNA-LIAMYGKCAFVEEMVKLFEVMPERNLVS-WNSII 273
A ++ + G+ +++E + E MP + S W +++
Sbjct: 585 PEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALL 624
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ+C K I+ GK++H V + F D +I T+L+ +Y +C +R +FD +
Sbjct: 81 LLQSCIARKAIKPGKQLHAQVCLAG-FGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKH 139
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+F WN L+ G+ N Y + ++ ++ D L PDNFTFP V+KAC ++ + G +
Sbjct: 140 NIFLWNVLIRGYAWNGPYEAAVQLYYQMF-DYGLVPDNFTFPFVLKACAALSAIEHGREI 198
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G DVFV ALI MY KC V ++F+ + R+ V WNS++ +S+NG
Sbjct: 199 HEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHP 258
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
L +M+ G P T+VT +
Sbjct: 259 DACLSLCSEMV--LTGLRPTEATLVTAI 284
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC IE G+ +HE V T + D + LI MY+ CG +R VFD + R
Sbjct: 182 VLKACAALSAIEHGREIHEHV-VQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVR 240
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN++++ +++N LS+ E+ T L+P T I A A + G +
Sbjct: 241 DAVLWNSMLAAYSQNGHPDACLSLCSEMVL-TGLRPTEATLVTAISASADNAALPQGREL 299
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG++ + V AL+ MY KC V LFE + + +VSWN++I G++ +G +
Sbjct: 300 HGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHA 359
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL +M + PD IT V VL
Sbjct: 360 TEALDLFEEMNRVAK---PDHITFVGVL 384
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+ +H L S +F + + T L+ MY+ CG +R +F+ L + + WNA+++G+
Sbjct: 296 GRELHGL-SWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYA 354
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGF 218
+ T+ L +F E++ KPD+ TF V+ AC GG+ + G+
Sbjct: 355 MHGHATEALDLFEEMNRVA--KPDHITFVGVLSACSHGGLLEEGW 397
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 2/120 (1%)
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
+ T L P + ++++C + G +H G D ++ L+ +Y C
Sbjct: 66 AESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDS 125
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ LF+ +P+ N+ WN +I G++ NG + L +M + G +PD T VL
Sbjct: 126 LSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMF--DYGLVPDNFTFPFVL 183
>gi|255538774|ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551153|gb|EEF52639.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1218
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 147/265 (55%), Gaps = 19/265 (7%)
Query: 51 SLSAKTNNASTQGLHFLQEITT-----LCEESKSLNKALSLLQE-NLHNADLKEATGV-L 103
+LSA + + + F ++IT LC++ + LN+A+S L+ H + + T + L
Sbjct: 22 TLSAFSTKPTKSSVPFTKKITDSHLNYLCKKGR-LNEAVSALELIAQHGSKVSPKTFISL 80
Query: 104 LQACGHEKDIEIGKRVH---ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
LQ+C + +G++VH LV F + T+L++MY+ CG D+R++F ++
Sbjct: 81 LQSCIDCNSVTLGRKVHAHFHLVQEKNPF-----LETKLVSMYAKCGSLSDARKLFGEMR 135
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+NL+ W+A++ F++ + +V+ +F + + L PD F P +++ACG D+ G
Sbjct: 136 EKNLYTWSAMIGAFSREHRWKEVVELFYMMMEENCL-PDAFLLPKILQACGNSRDIKSGE 194
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH +A K G+ G FV+N+++A+Y KC + K FE+M + +WN++I G+ ++G
Sbjct: 195 MVHSLAIKCGVDGYPFVNNSILAVYAKCGKLSLASKCFEMMDKSETAAWNALISGYCQHG 254
Query: 281 FSCESFDLLIKMMGCEEGFIPDVIT 305
E+ L M EEG P +++
Sbjct: 255 QIEEAQRLFDAMR--EEGIEPGLVS 277
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 118/272 (43%), Gaps = 72/272 (26%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT------------------------- 137
+LQACG+ +DI+ G+ VH L F+ N+
Sbjct: 180 ILQACGNSRDIKSGEMVHSLAIKCGVDGYPFVNNSILAVYAKCGKLSLASKCFEMMDKSE 239
Query: 138 -----RLITMYSLCGFPLDSRRVFDSLK-------------------------------- 160
LI+ Y G +++R+FD+++
Sbjct: 240 TAAWNALISGYCQHGQIEEAQRLFDAMREEGIEPGLVSWNILIAGYNQLGYFDIAMELMK 299
Query: 161 -------TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
+ ++ W +++SG +N+ + L +F ++ ++P+ T + AC +
Sbjct: 300 KMEVLGTSPDVVTWTSMISGLAQNDKASKALHLFNDMIL-ARVEPNGVTISSAVSACASL 358
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
+ G +H +A K+G + DV V N+LI MY KC +E K+F++MPE+++ +WNS+I
Sbjct: 359 KVLNEGLEIHALAVKLGFVEDVLVGNSLIDMYSKCGKLENAWKVFDMMPEKDVYTWNSMI 418
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
G+ + G+ ++ L +KM E P+ IT
Sbjct: 419 GGYCQVGYCGKAHMLFMKMQKSET--QPNAIT 448
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 127/308 (41%), Gaps = 55/308 (17%)
Query: 15 LFPSLRQKKSQPQFPATVIQRNKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLC 74
LF ++R++ +P + I ++ F L + S + + I+ L
Sbjct: 262 LFDAMREEGIEPGLVSWNILIAGYNQLGYFDIAMELMKKMEVLGTSPDVVTWTSMISGLA 321
Query: 75 EESKSLNKALSLLQENLHNADLKEATGVLLQ----ACGHEKDIEIGKRVHELVSASTQFS 130
+ K+ +KAL L + + E GV + AC K + G +H L + F
Sbjct: 322 QNDKA-SKALHLFNDMI--LARVEPNGVTISSAVSACASLKVLNEGLEIHAL-AVKLGFV 377
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
D ++ LI MYS CG ++ +VFD + ++++ WN+++ G+ + +F+++
Sbjct: 378 EDVLVGNSLIDMYSKCGKLENAWKVFDMMPEKDVYTWNSMIGGYCQVGYCGKAHMLFMKM 437
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
+E +P+ T+ N +I Y
Sbjct: 438 QK-SETQPNAITW-----------------------------------NNMIWGYIHNGD 461
Query: 251 VEEMVKLFEVMPE-----RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV-- 303
++ + LF M E R+ SWNS+I G+ + G ++ + +M + F ++
Sbjct: 462 EDQAMDLFRRMEEDGKIKRDTASWNSLISGYLQIGQKDKALSIFRQM----QSFSININS 517
Query: 304 ITVVTVLP 311
+T+++VLP
Sbjct: 518 VTILSVLP 525
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 2/141 (1%)
Query: 153 RRVFDSLK-TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
RR+ + K R+ WN+L+SG+ + LSIF ++ S + + ++ T V+ AC
Sbjct: 470 RRMEEDGKIKRDTASWNSLISGYLQIGQKDKALSIFRQMQSFS-ININSVTILSVLPACA 528
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
+ + +HG + L + ++N+LI Y K + +F+ ++ ++WNS
Sbjct: 529 NLIALKMVKEIHGCVIRRNLDSLLPITNSLIDTYAKSGNIGYSRTIFDRALFKDFITWNS 588
Query: 272 IICGFSENGFSCESFDLLIKM 292
+I G+ G S + L+ +M
Sbjct: 589 LIAGYVLFGCSDAALGLVDQM 609
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 104/178 (58%), Gaps = 2/178 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ AC K++E +++H + S++F+ D ++ LI MY C LD+R VFD ++ +
Sbjct: 57 FITACAQSKNLEDARKIHAHL-GSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRK 115
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +L++G+ +N++ + + + + KP+ FTF ++KA G AD G G +
Sbjct: 116 DMVSWTSLIAGYAQNDMPVEAIGLLPGMLK-GRFKPNGFTFASLLKAAGAYADSGTGRQI 174
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H +A K G DV+V +AL+ MY +C ++ +F+ + +N VSWN++I GF+ G
Sbjct: 175 HALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKG 232
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+A G D G+++H L + + D + + L+ MY+ CG + VFD L ++
Sbjct: 158 LLKAAGAYADSGTGRQIHAL-AVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSK 216
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WNAL+SGF + L F E+ + + +FT+ V + + + G V
Sbjct: 217 NGVSWNALISGFARKGDGESALMTFAEMLRNG-FEATHFTYSSVFSSIARLGALEQGKWV 275
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K FV N L+ MY K + + K+F+ + ++LV+WNS++ F++ G
Sbjct: 276 HAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLG 335
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +M + G + IT + +L
Sbjct: 336 KEAVSHFEEMR--KSGVYLNQITFLCIL 361
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
++L EL P + I AC ++ +H GD F+ N+LI MY K
Sbjct: 39 LDLLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCK 98
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
C V + +F+ M +++VSW S+I G+++N E+ LL M+ + F P+ T
Sbjct: 99 CRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGML--KGRFKPNGFTFA 156
Query: 308 TVL 310
++L
Sbjct: 157 SLL 159
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 119/210 (56%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L ACG +E GK++H ++ T + ++ + + L+ MYS C + VF +
Sbjct: 281 GSILTACGALAALEEGKQIHAYIT-RTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMM 339
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+N+ W A++ G+ +N + + +F E+ D +KPD+FT VI +C +A + G+
Sbjct: 340 WKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDG-IKPDDFTLGSVISSCANLASLEEGA 398
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H +A GL V VSNAL+ +YGKC +E+ +LF+ M + VSW +++ G+++ G
Sbjct: 399 QFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFG 458
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ DL KM+ +G PD +T + VL
Sbjct: 459 KAKETIDLFEKML--SKGVKPDGVTFIGVL 486
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 97/180 (53%), Gaps = 4/180 (2%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
N + NT +IT C ++R +F++++ R+ W +V+G T+N L ++ L +F +
Sbjct: 210 NVVMCNT-MITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRM 268
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
++ + D +TF ++ ACG +A + G +H + +VFV +AL+ MY KC
Sbjct: 269 RAEG-VGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRS 327
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
V +F M +N++SW ++I G+ +NG E+ + +M +G PD T+ +V+
Sbjct: 328 VRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQ--RDGIKPDDFTLGSVI 385
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 95/244 (38%), Gaps = 66/244 (27%)
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE 189
S +++NT L+T Y+ G +RRVFD++ RNL N+L+S + L D+ +F
Sbjct: 44 SPTYLLNT-LLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAGLVRDMERLFTS 102
Query: 190 --------------------------------LSSDTELKPDNFTFPCVIKACGGIADVG 217
L + ++P T V+ + D
Sbjct: 103 LPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRA 162
Query: 218 FGSGVH-------------------GMAAKMGLIGD------------VFVSNALIAMYG 246
G VH M AK+G IGD V + N +I
Sbjct: 163 LGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLL 222
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
+C V E LFE + ER+ ++W +++ G ++NG E+ D+ +M EG D T
Sbjct: 223 RCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRA--EGVGIDQYTF 280
Query: 307 VTVL 310
++L
Sbjct: 281 GSIL 284
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 9/167 (5%)
Query: 101 GVLLQACGHEKDIEIGKRVH--ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
G ++ +C + +E G + H LVS + ++ L+T+Y CG D+ R+FD
Sbjct: 382 GSVISSCANLASLEEGAQFHCLALVSGLRPY---VTVSNALVTLYGKCGSIEDAHRLFDE 438
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADV 216
+ + W ALV G+ + + + +F ++ S +KPD TF V+ AC G+ D
Sbjct: 439 MSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKG-VKPDGVTFIGVLSACSRSGLVDK 497
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 263
G S H M ++ +I +Y + ++++ + + MP
Sbjct: 498 G-RSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPR 543
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 115/211 (54%), Gaps = 4/211 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V + C KD++ G+ +H ++ + D I+ T LITMY+ C +R+ FD +
Sbjct: 63 VAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGK 122
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE--LKPDNFTFPCVIKACGGIADVGFG 219
+ L WNAL++G+++N + L I+ ++ S + +KPD TF + AC + D+ G
Sbjct: 123 KTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQG 182
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+ G D V NALI MY KC +E K+F+ + R++++WN++I G+++
Sbjct: 183 REIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQ 242
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + ++ +L +M + P+V+T + +L
Sbjct: 243 GAATQALELFQRMGPNDPK--PNVVTFIGLL 271
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 114/208 (54%), Gaps = 5/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC DI G+ + E + ++ +++D I+ LI MYS CG +R+VFD LK R+
Sbjct: 170 LYACTVVGDISQGREI-EARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRD 228
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN ++SG+ K T L +F + + + KP+ TF ++ AC + D+ G +H
Sbjct: 229 VIAWNTMISGYAKQGAATQALELFQRMGPN-DPKPNVVTFIGLLTACTNLEDLEQGRAIH 287
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKC-AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ G D+ + N L+ MY KC + +EE ++FE M R++++WN +I + + G +
Sbjct: 288 RKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQA 347
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ D+ +M E P+ IT+ VL
Sbjct: 348 KDALDIFKQMQ--LENVAPNEITLSNVL 373
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 115/209 (55%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLD-SRRVFDSLKT 161
LL AC + +D+E G+ +H V + +D +I L+ MY+ C L+ +R+VF+ ++T
Sbjct: 270 LLTACTNLEDLEQGRAIHRKVREDG-YESDLVIGNVLLNMYTKCSSSLEEARQVFERMRT 328
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ WN L+ + + D L IF ++ + + P+ T V+ AC + G
Sbjct: 329 RDVITWNILIVAYVQYGQAKDALDIFKQMQLEN-VAPNEITLSNVLSACAVLGAKRQGKA 387
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH + A DV + N+L+ MY +C +++ V +F + +++LVSW+++I ++++G
Sbjct: 388 VHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGH 447
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S + +++ +EG D +T+V+ L
Sbjct: 448 SRTGLEHFWELL--QEGLAADDVTMVSTL 474
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 3/171 (1%)
Query: 142 MYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF 201
MY CG D+ VF +++ N W +V+ F +N Y + L + + + L+PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEG-LRPDGA 59
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIG-DVFVSNALIAMYGKCAFVEEMVKLFEV 260
F I C D+ G +H M + L+ D+ + ALI MY +C +E K F+
Sbjct: 60 MFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDE 119
Query: 261 MPERNLVSWNSIICGFSENGFSCESFDLLIKMMG-CEEGFIPDVITVVTVL 310
M ++ LV+WN++I G+S NG + + M+ EG PD IT + L
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSAL 170
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 106/178 (59%), Gaps = 3/178 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC EKD+ G++VH LV+ S ++D I T L+ MY+ C P+D+RRVFD++ RN
Sbjct: 158 LSACAAEKDLRTGEQVHGLVARSPH-ADDVHIGTALVDMYAKCERPVDARRVFDAMPERN 216
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN+L++ + +N + L +FVE+ + T PD T V+ AC G+A G VH
Sbjct: 217 VVSWNSLITCYEQNGPVGEALVLFVEMMA-TGFFPDEVTLSSVMSACAGLAAEREGRQVH 275
Query: 224 G-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
M + L D+ ++NAL+ MY KC E +F+ MP R++VS SI+ G++++
Sbjct: 276 AHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSA 333
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 134/280 (47%), Gaps = 42/280 (15%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSAST 127
+ T E++ + +AL L E + + + ++ AC G++VH +
Sbjct: 223 LITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRD 282
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR------------------------- 162
+ +D ++N L+ MY+ CG ++R +FDS+ +R
Sbjct: 283 RLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVF 342
Query: 163 ------NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
N+ WN L++ + +N + + +FV+L D+ + P ++T+ V+ ACG IA +
Sbjct: 343 SQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDS-IWPTHYTYGNVLNACGNIAVL 401
Query: 217 GFGSGVH------GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
G H G G DVFV N+L+ MY K +++ K+FE M R+ VSWN
Sbjct: 402 QLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWN 461
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++I G+++NG + ++ L +M+ E PD +T++ VL
Sbjct: 462 AMIVGYAQNGRAKDALHLFERMLCSNEN--PDSVTMIGVL 499
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 35/227 (15%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
+ H V S F++NT L++ Y+ G ++RRVFD + RN F +NAL+S +
Sbjct: 36 ARAAHGCVLKSPVAGETFLLNT-LVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYA 94
Query: 176 KNELYTDVLSIFVELSSDTE---------------------------LKPDNF-----TF 203
+ + ++F + + + D+F +F
Sbjct: 95 RLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSF 154
Query: 204 PCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 263
+ AC D+ G VHG+ A+ DV + AL+ MY KC + ++F+ MPE
Sbjct: 155 ASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPE 214
Query: 264 RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
RN+VSWNS+I + +NG E+ L ++MM GF PD +T+ +V+
Sbjct: 215 RNVVSWNSLITCYEQNGPVGEALVLFVEMMAT--GFFPDEVTLSSVM 259
>gi|356547111|ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 107/241 (44%), Gaps = 35/241 (14%)
Query: 103 LLQACGH---EKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
LL AC H I G +H V ND ++ T LI MY+ CG +R FD +
Sbjct: 97 LLSACAHYPSRSSISFGTAIHAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQM 156
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK---------------------- 197
RNL WN ++ G+ +N + D L +F L +
Sbjct: 157 GVRNLVSWNTMIDGYMRNGKFEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFR 216
Query: 198 --------PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
PD T VI AC + +G G VH + +V VSN+LI MY +C
Sbjct: 217 EMQLSGVAPDYVTVIAVIAACANLGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCG 276
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
++ ++F+ MP+R LVSWNSII GF+ NG + E+ M EEGF PD ++
Sbjct: 277 CIDLARQVFDRMPQRTLVSWNSIIVGFAVNGLADEALSYFNSMQ--EEGFKPDGVSYTGA 334
Query: 310 L 310
L
Sbjct: 335 L 335
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI---ADVGFGS 220
+ W ++ + K+ S FV++ + ++P++ TF ++ AC + + FG+
Sbjct: 56 IVSWTTSIADYCKSGHLVKAASKFVQMR-EAAIEPNHITFITLLSACAHYPSRSSISFGT 114
Query: 221 GVHGMAAKMGL-IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H K+GL I DV V ALI MY KC VE F+ M RNLVSWN++I G+ N
Sbjct: 115 AIHAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGYMRN 174
Query: 280 G 280
G
Sbjct: 175 G 175
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 7/175 (4%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++ AC + + +G VH LV + F N+ ++ LI MYS CG +R+VFD +
Sbjct: 232 AVIAACANLGTLGLGLWVHRLV-MTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQ 290
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R L WN+++ GF N L + LS F + + KPD ++ + AC +G G
Sbjct: 291 RTLVSWNSIIVGFAVNGLADEALSYFNSMQEEG-FKPDGVSYTGALMACSHAGLIGEGLR 349
Query: 222 V-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
+ M ++ + L+ +Y + +EE + + + MP + N +I G
Sbjct: 350 IFEHMKRVRRILPRIEHYGCLVDLYSRAGRLEEALNVLKNMPMKP----NEVILG 400
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 114/208 (54%), Gaps = 2/208 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG D+++G V E V + + ++ + + LI MY CG + +RR+FDS+K +
Sbjct: 234 VLGACGELGDLKLGTWVEEFV-VENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKK 292
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA+++G+ +N + + + +F ++ + PD T ++ AC I + G V
Sbjct: 293 DKVTWNAMITGYAQNGMSEEAIKLFQDMRMSST-APDQITLIGILSACASIGALDLGKQV 351
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
A++ G DV+V AL+ MY KC ++ ++F MP++N VSWN++I + +G +
Sbjct: 352 EIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQA 411
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L MM P+ IT V VL
Sbjct: 412 QEALALFKSMMNEGGTVSPNDITFVGVL 439
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 127/253 (50%), Gaps = 11/253 (4%)
Query: 58 NASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGK 117
N +GL ++L E S K L L NL L AC + +E G+
Sbjct: 95 NVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNL-------TYPFLFIACSNLLAVENGR 147
Query: 118 RVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKN 177
H V D ++ LITMY+ CG D+R+VFD + ++L WN+++SG++K
Sbjct: 148 MGHCSV-IRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKM 206
Query: 178 ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFV 237
+ + +F E+ + +P+ + V+ ACG + D+ G+ V + + + F+
Sbjct: 207 RHAGEAVGLFREMM-EAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFM 265
Query: 238 SNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEE 297
+ALI MYGKC + ++F+ M +++ V+WN++I G+++NG S E+ L M
Sbjct: 266 GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSST 325
Query: 298 GFIPDVITVVTVL 310
PD IT++ +L
Sbjct: 326 A--PDQITLIGIL 336
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 114/235 (48%), Gaps = 12/235 (5%)
Query: 77 SKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFII 135
S+ LN + N + L + LLQ C K + K++H +L++ S N F
Sbjct: 12 SRYLNLQKPHSKPNPNRQALSDKFNSLLQQCLSIKQL---KQIHAQLLTNSIHKPNSF-- 66
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
L + L F S F ++ + +N ++ G + + + F
Sbjct: 67 ---LYKIADLKDFAYASV-FFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLG 122
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
LKP+N T+P + AC + V G H + GL D VS++LI MY +C + +
Sbjct: 123 LKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDAR 182
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F+ + +++LVSWNS+I G+S+ + E+ L +MM E GF P+ +++V+VL
Sbjct: 183 KVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMM--EAGFQPNEMSLVSVL 235
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +++GK+V E+ ++ F +D + T L+ MY+ CG ++ RVF + +
Sbjct: 335 ILSACASIGALDLGKQV-EIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKK 393
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDT-ELKPDNFTFPCVIKAC--GGIADVGFG 219
N WNA++S + + L++F + ++ + P++ TF V+ AC G+ D G
Sbjct: 394 NEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEG-R 452
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
H M++ GL+ + + ++ ++ + +EE MPE+
Sbjct: 453 RLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEK 497
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 156/326 (47%), Gaps = 35/326 (10%)
Query: 7 SSACLWSPLFPSLRQKKSQPQFPATVIQRNKHSLRSIFKEKSSLSL--SAKTNNASTQGL 64
S L S L +L K+ PQ R HSL I SLS+ S K + Q
Sbjct: 17 SQEFLRSSLLKTLSSAKNTPQL------RTVHSL--IITSGLSLSVIFSGKLISKYAQVK 68
Query: 65 HFLQEITTLCEESKSLNKAL--SLLQENLHNADLKEATGV------------------LL 104
+ ++ S + N L S+++ HN +A G ++
Sbjct: 69 DPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVI 128
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNL 164
+C D+E+G VHE + F +D I LI MYS ++R VF+ + R+
Sbjct: 129 NSCARILDLELGCIVHEH-AMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDS 187
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
WN+L+SG+ N + D L ++ + T + PD FT V+ ACG + V G VHG
Sbjct: 188 VSWNSLISGYCSNGFWEDALDMYHKFRM-TGMVPDCFTMSSVLLACGSLMAVKEGVAVHG 246
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCE 284
+ K+G+ GDV + N L++MY K + E ++F M ++ V+WN++ICG+++ G
Sbjct: 247 VIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEA 306
Query: 285 SFDLLIKMMGCEEGFIPDVITVVTVL 310
S L + M+ +GF+PD++++ + +
Sbjct: 307 SVKLFMDMI---DGFVPDMLSITSTI 329
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 116/208 (55%), Gaps = 5/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
++ACG D+++GK VH+ + S F D + LI MY+ CG L ++ VFD+ K ++
Sbjct: 329 IRACGQSGDLQVGKFVHKYLIGSG-FECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKD 387
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WN+L++G+T++ Y + L F + E KPD+ TF ++ +AD+ G G+H
Sbjct: 388 SVTWNSLINGYTQSGYYKEGLESFKMMK--MERKPDSVTFVLLLSIFSQLADINQGRGIH 445
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
K G ++ + N+L+ +Y KC +++++K+F M +++SWN++I
Sbjct: 446 CDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCT 505
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVLP 311
F ++ +M EG +PD TV+ +LP
Sbjct: 506 VGFQMINEMR--TEGLMPDEATVLGILP 531
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 6/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG ++ G VH ++ + D II L++MY ++RRVF + +
Sbjct: 228 VLLACGSLMAVKEGVAVHGVIE-KIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVK 286
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN ++ G+ + + + +F+++ PD + I+ACG D+ G V
Sbjct: 287 DSVTWNTMICGYAQLGRHEASVKLFMDMIDG--FVPDMLSITSTIRACGQSGDLQVGKFV 344
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G D N LI MY KC + ++F+ ++ V+WNS+I G++++G+
Sbjct: 345 HKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYY 404
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E + KMM E PD +T V +L
Sbjct: 405 KEGLESF-KMMKMERK--PDSVTFVLLL 429
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 4/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+LL DI G+ +H V F + II L+ +Y+ CG D +VF +
Sbjct: 427 LLLSIFSQLADINQGRGIHCDV-IKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSA 485
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ WN +++ + T + E+ ++ L PD T ++ C +A G
Sbjct: 486 HDIISWNTVIASSVHFDDCTVGFQMINEMRTEG-LMPDEATVLGILPMCSLLAVRRQGKE 544
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG K G +V + NALI MY KC +E +K+F+ M E+++V+W ++I F G
Sbjct: 545 IHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGE 604
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ M G +PD + + +
Sbjct: 605 GKKALKAFQDME--LSGVLPDSVAFIAFI 631
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 96/159 (60%), Gaps = 3/159 (1%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+R+VFD ++F WNA++ G++ + + D + ++ + + + + PD FT PCV+KAC
Sbjct: 122 ARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQA-SGVNPDGFTLPCVLKACS 180
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
G+ + G VHG ++G DVFV N L+A+Y KC VE+ +FE + +RN+VSW S
Sbjct: 181 GVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTS 240
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+I G+ +NG E+ + +M + PD I +V+VL
Sbjct: 241 MISGYGQNGLPMEALRIFGQMR--QRNVKPDWIALVSVL 277
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 111/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC +E+GKRVH + F +D + L+ +Y+ CG +R VF+ L R
Sbjct: 175 VLKACSGVPVLEVGKRVHGQI-FRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDR 233
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W +++SG+ +N L + L IF ++ +KPD V++A + D+ G +
Sbjct: 234 NIVSWTSMISGYGQNGLPMEALRIFGQMRQ-RNVKPDWIALVSVLRAYTDVEDLEQGKSI 292
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG KMGL + + +L AMY KC V F+ M N++ WN++I G+++NG++
Sbjct: 293 HGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYT 352
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M+ + D ITV + +
Sbjct: 353 NEAVGLFQEMI--SKNIRTDSITVRSAI 378
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 110/209 (52%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+A +D+E GK +H +V +F D +I+ L MY+ CG + +R FD ++
Sbjct: 276 VLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLIS--LTAMYAKCGQVMVARSFFDQMEI 333
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
N+ WNA++SG+ KN + + +F E+ S ++ D+ T I AC + +
Sbjct: 334 PNVMMWNAMISGYAKNGYTNEAVGLFQEMISKN-IRTDSITVRSAILACAQVGSLDLAKW 392
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+ K DVFV+ ALI M+ KC V+ ++F+ ++++V W+++I G+ +G
Sbjct: 393 MGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGR 452
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ DL M + G P+ +T V +L
Sbjct: 453 GQDAIDLFYAMK--QAGVCPNDVTFVGLL 479
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 113/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ AC K++++G+ +H + + LI +Y CG+ +R++FD + +
Sbjct: 213 LIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEIPEK 272
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WN+L+ G+ + +V+ + E+ + LKPD FT V+ AC + G+ V
Sbjct: 273 NTVVWNSLICGYCQIGSLNEVIELLREMHL-SNLKPDRFTVSGVLSACAQMGAFNLGNWV 331
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K G I DVF+ ALI MY KC F+ K+F+ M ERN+ +WN+I+ G++ +G +
Sbjct: 332 HRFAEKKG-IWDVFIGTALIDMYAKCGFIGAARKVFDQMNERNVATWNAILSGYASHGQA 390
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L +M E G PD IT + VL
Sbjct: 391 ESAIELFSEMR--ESGARPDSITFLAVL 416
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 111/209 (53%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ +AC + +E GK VH ++ + D + + L+ Y +CG ++++VFD +
Sbjct: 111 VFKACASQFAVEKGKEVHGVI-VRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAK 169
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNAL++G+ + + D +F E+ E++P+ T +I AC ++ G +
Sbjct: 170 DVVFWNALITGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAI 229
Query: 223 HG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
HG M M L V + ALI +Y KC +++ KLF+ +PE+N V WNS+ICG+ + G
Sbjct: 230 HGYMMKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGS 289
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E +LL +M PD TV VL
Sbjct: 290 LNEVIELLREMH--LSNLKPDRFTVSGVL 316
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 79 SLNKALSLLQENLHNADLK----EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFI 134
SLN+ + LL+E +H ++LK +GVL AC +G VH A + D
Sbjct: 289 SLNEVIELLRE-MHLSNLKPDRFTVSGVL-SACAQMGAFNLGNWVHRF--AEKKGIWDVF 344
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
I T LI MY+ CGF +R+VFD + RN+ WNA++SG+ + + +F E+ ++
Sbjct: 345 IGTALIDMYAKCGFIGAARKVFDQMNERNVATWNAILSGYASHGQAESAIELFSEMR-ES 403
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI-GDVFVSNALIAMYGKCAFVEE 253
+PD+ TF V+ AC V G + + I V ++ + G+ ++E
Sbjct: 404 GARPDSITFLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQE 463
Query: 254 MVKLFEVM-PERNLVSWNSIICGFSENG 280
+L ++M E N+V W +++ S +G
Sbjct: 464 ARELIKMMVVEPNVVVWGALLSACSIHG 491
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 103/196 (52%), Gaps = 6/196 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLD-SRRVFDSLKT 161
L++ C +I+ K++H S+ FII T++I + L LD + +VF+ +
Sbjct: 12 LIETC---TNIQQLKQIHAKSIISSLSYTQFII-TKIINSF-LSHACLDYATQVFNQTQE 66
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+ F +NA++ ++ ++ +SI+ ++ + + D +T+P V KAC V G
Sbjct: 67 PDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKE 126
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VHG+ ++G D F+ ++L+ Y C + ++F+ +++V WN++I G++ G
Sbjct: 127 VHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGM 186
Query: 282 SCESFDLLIKMMGCEE 297
+SF + +M+ +E
Sbjct: 187 VLDSFGVFKEMVEVKE 202
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 155/322 (48%), Gaps = 35/322 (10%)
Query: 11 LWSPLFPSLRQKKSQPQFPATVIQRNKHSLRSIFKEKSSLSL--SAKTNNASTQGLHFLQ 68
L S L +L K+ PQ R HSL I SLS+ S K + Q +
Sbjct: 21 LRSSLLKTLSSAKNTPQL------RTVHSL--IITSGLSLSVIFSGKLISKYAQVKDPIS 72
Query: 69 EITTLCEESKSLNKAL--SLLQENLHNADLKEATGV------------------LLQACG 108
++ S + N L S+++ HN +A G ++ +C
Sbjct: 73 SVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCA 132
Query: 109 HEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWN 168
D+E+G VHE + F +D I LI MYS ++R VF+ + R+ WN
Sbjct: 133 RILDLELGCIVHEH-AMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWN 191
Query: 169 ALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK 228
+L+SG+ N + D L ++ + T + PD FT V+ ACG + V G VHG+ K
Sbjct: 192 SLISGYCSNGFWEDALDMYHKFRM-TGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEK 250
Query: 229 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
+G+ GDV + N L++MY K + E ++F M ++ V+WN++ICG+++ G S L
Sbjct: 251 IGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKL 310
Query: 289 LIKMMGCEEGFIPDVITVVTVL 310
+ M+ +GF+PD++++ + +
Sbjct: 311 FMDMI---DGFVPDMLSITSTI 329
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 116/208 (55%), Gaps = 5/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
++ACG D+++GK VH+ + S F D + LI MY+ CG L ++ VFD+ K ++
Sbjct: 329 IRACGQSGDLQVGKFVHKYLIGSG-FECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKD 387
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WN+L++G+T++ Y + L F + E KPD+ TF ++ +AD+ G G+H
Sbjct: 388 SVTWNSLINGYTQSGYYKEGLESFKMMK--MERKPDSVTFVLLLSIFSQLADINQGRGIH 445
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
K G ++ + N+L+ +Y KC +++++K+F M +++SWN++I
Sbjct: 446 CDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCT 505
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVLP 311
F ++ +M EG +PD TV+ +LP
Sbjct: 506 VGFQMINEMR--TEGLMPDEATVLGILP 531
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 6/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG ++ G VH ++ + D II L++MY ++RRVF + +
Sbjct: 228 VLLACGSLMAVKEGVAVHGVIE-KIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVK 286
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN ++ G+ + + + +F+++ PD + I+ACG D+ G V
Sbjct: 287 DSVTWNTMICGYAQLGRHEASVKLFMDMIDG--FVPDMLSITSTIRACGQSGDLQVGKFV 344
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G D N LI MY KC + ++F+ ++ V+WNS+I G++++G+
Sbjct: 345 HKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYY 404
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E + KMM E PD +T V +L
Sbjct: 405 KEGLESF-KMMKMERK--PDSVTFVLLL 429
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 4/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+LL DI G+ +H V F + II L+ +Y+ CG D +VF +
Sbjct: 427 LLLSIFSQLADINQGRGIHCDV-IKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSA 485
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ WN +++ + T + E+ ++ L PD T ++ C +A G
Sbjct: 486 HDIISWNTVIASSVHFDDCTVGFQMINEMRTEG-LMPDEATVLGILPMCSLLAVRRQGKE 544
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG K G +V + NALI MY KC +E +K+F+ M E+++V+W ++I F G
Sbjct: 545 IHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGE 604
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ M G +PD + + +
Sbjct: 605 GKKALKAFQDME--LSGVLPDSVAFIAFI 631
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L G D+ IGK++H + S D + N LI MYS CG ++ F +
Sbjct: 539 ATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNA-LIDMYSKCGMLDAAKSNFSNRS 597
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
++ W AL++G+ +N + + L +F ++ L+PD TF +IKA +A +G G
Sbjct: 598 EKSAISWTALITGYVQNGQHEEALQLFSDMRR-AGLRPDRATFSSIIKASSSLAMIGLGR 656
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H + G VF + L+ MY KC ++E ++ F+ MPERN +SWN++I ++ G
Sbjct: 657 QLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYG 716
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + + M+ C GF PD +T ++VL
Sbjct: 717 EAKNAIKMFEGMLHC--GFNPDSVTFLSVL 744
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 10/190 (5%)
Query: 124 SASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDV 183
S ST N F+ N L+ YS C D RR+FD + R+ +N +++ + N+ V
Sbjct: 461 SRSTSVLNVFV-NNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATV 519
Query: 184 LSIFVELSS---DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNA 240
L +F E+ D ++ P + ++ G + DV G +H +GL + + NA
Sbjct: 520 LRLFREMQKLGFDRQVLP----YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNA 575
Query: 241 LIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI 300
LI MY KC ++ F E++ +SW ++I G+ +NG E+ L M G
Sbjct: 576 LIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMR--RAGLR 633
Query: 301 PDVITVVTVL 310
PD T +++
Sbjct: 634 PDRATFSSII 643
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 7/162 (4%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
N F +N +++ YS G ++ +F S RN W ++ +D LS+F +
Sbjct: 287 NIFSLNL-ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM 345
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
+ + PD T V+ G +H A K GL VFV N L+ Y K
Sbjct: 346 LGEGVI-PDRVTVTTVLNLPGCTV-----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGL 399
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ ++F M +++ V++N+++ G S+ G ++ L M
Sbjct: 400 LAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAM 441
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
++F N +++ Y + LF P RN +W ++ + G + ++ L M+
Sbjct: 287 NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 346
Query: 294 GCEEGFIPDVITVVTVL 310
G EG IPD +TV TVL
Sbjct: 347 G--EGVIPDRVTVTTVL 361
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 121/208 (58%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC ++D+ +G++VH + + S+ F+ NT L+ MY+ CG DSRR+F + R
Sbjct: 88 VLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANT-LVVMYAKCGLLDDSRRLFGGIVER 146
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WNAL S + ++EL + + +F E+ + + P+ F+ ++ AC G+ + G +
Sbjct: 147 NVVSWNALFSCYVQSELCGEAVGLFKEMVR-SGIMPNEFSISIILNACAGLQEGDLGRKI 205
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ KMGL D F +NAL+ MY K +E V +F+ + ++VSWN+II G + +
Sbjct: 206 HGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCN 265
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ LL +M G G P++ T+ + L
Sbjct: 266 DLALMLLDEMKG--SGTRPNMFTLSSAL 291
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 120/208 (57%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L++ + I++ K++H + S +S+ ++IN+ L+ Y C ++ ++F+
Sbjct: 391 VLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINS-LLDTYGKCNHIDEASKIFEERTWE 449
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L + ++++ +++ + L +++++ D ++KPD F ++ AC ++ G +
Sbjct: 450 DLVAYTSMITAYSQYGDGEEALKLYLQMQ-DADIKPDPFICSSLLNACANLSAYEQGKQL 508
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K G + D+F SN+L+ MY KC +E+ + F +P R +VSW+++I G++++G
Sbjct: 509 HVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHG 568
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M+ +G P+ IT+V+VL
Sbjct: 569 KEALRLFNQML--RDGVPPNHITLVSVL 594
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 100/182 (54%), Gaps = 3/182 (1%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
FS D + L+T+YS C +R++ D ++ W++L+SG+ +N + L +F
Sbjct: 12 FSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFN 71
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
E+ +K + FTFP V+KAC D+ G VHGMA G D FV+N L+ MY KC
Sbjct: 72 EMCL-LGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKC 130
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
+++ +LF + ERN+VSWN++ + ++ E+ L +M+ G +P+ ++
Sbjct: 131 GLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMV--RSGIMPNEFSISI 188
Query: 309 VL 310
+L
Sbjct: 189 IL 190
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 112/219 (51%), Gaps = 4/219 (1%)
Query: 76 ESKSLNKALSLLQENLHNADLKE--ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
+S+ +A+ L +E + + + + ++L AC ++ ++G+++H L+ + F
Sbjct: 160 QSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQF 219
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
N L+ MYS G + VF + ++ WNA+++G ++ L + E+
Sbjct: 220 SANA-LVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKG- 277
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+ +P+ FT +KAC + G +H KM D+F + L+ MY KC +++
Sbjct: 278 SGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDD 337
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ ++ MP++++++WN++I G+S+ G ++ L KM
Sbjct: 338 ARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKM 376
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K G D + N L+ +Y KC KL + E ++VSW+S++ G+ +NGF
Sbjct: 3 LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62
Query: 282 SCESFDLLIKM----MGCEEGFIPDVITVVTV 309
E+ + +M + C E P V+ ++
Sbjct: 63 VEEALLVFNEMCLLGVKCNEFTFPSVLKACSM 94
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 104/172 (60%), Gaps = 3/172 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+I+ Y+ G + +F+++ RN+ WN+L++GF +N LY D L V + + + KP
Sbjct: 396 MISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGK-KP 454
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D TF C + +C +A + G +H + K G I D+FVSNALIAMY KC V+ K+F
Sbjct: 455 DQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVF 514
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + +L+SWNS+I G++ NG++ E+F +M EG +PD +T + +L
Sbjct: 515 KDIEGVDLISWNSLISGYALNGYANEAFWAFEQM--SSEGTVPDEVTFIGML 564
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 109 HEKDIEIGKRVHELVSASTQFSNDFIIN----TRLITMYSLCGFPLDSRRVFDSLKTRNL 164
++K I +GK+ ++ A FSN N ++T+++ G D+R++FD + RNL
Sbjct: 21 NKKIIYLGKQ-GKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNL 79
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
WN +++G+ N + + +F D + DNF++ +I G
Sbjct: 80 VSWNTMIAGYLHNNMVEEAHKLF-----DLMAERDNFSWALMITC---YTRKGMLEKARE 131
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+ + D NA+IA Y K ++ K+FE MP ++LVS+NS++ G+++NG
Sbjct: 132 LFELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNG 187
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 4/116 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L +C + +++GK++HEL+ S + ND ++ LI MY+ CG + +VF ++ +
Sbjct: 463 LSSCANLAALQVGKQLHELILKSG-YINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVD 521
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVG 217
L WN+L+SG+ N + F ++SS+ + PD TF ++ AC G+ + G
Sbjct: 522 LISWNSLISGYALNGYANEAFWAFEQMSSEGTV-PDEVTFIGMLSACSHAGLTNQG 576
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 83/171 (48%), Gaps = 11/171 (6%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + T +I Y G ++R V++ + +++ AL+SG +N + +F +L+
Sbjct: 296 DCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLN 355
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
K D + +I G G S + +M + + N +I+ Y + +
Sbjct: 356 -----KRDAICWNSMI---AGYCQSGRMSEALNLFRQMP-VKNAVSWNTMISGYAQAGEM 406
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
+ ++FE M RN++SWNS+I GF +NG ++ L+ +MG +EG PD
Sbjct: 407 DRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLV-LMG-QEGKKPD 455
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 21/167 (12%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + ++ Y+ G + + F+ + RN+ WN +V+GF N +F ++
Sbjct: 172 DLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKI- 230
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD------VFVSNALIAMY 245
PD V CG F HG + + D V NA+IA Y
Sbjct: 231 ------PDPNAVSWVTMLCG------FAR--HGKIVEARKLFDRMPCKNVVSWNAMIAAY 276
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ ++E VKLF+ P ++ VSW ++I G+ G E+ ++ +M
Sbjct: 277 VQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQM 323
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 239 NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES---FDLL 289
N+++ ++ K V + +LF+ M +RNLVSWN++I G+ N E+ FDL+
Sbjct: 52 NSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLM 105
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 116/207 (56%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ AC + + G+++H S + +S D I L+++Y+ CG ++ F+ + ++
Sbjct: 523 ISACAGIQALNQGRQIHAQ-SYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKD 581
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WN L+SGF ++ D L +F +++ +L+ FTF + A IA++ G +H
Sbjct: 582 SISWNGLISGFAQSGYCEDALKVFAQMNR-AKLEASFFTFGSAVSAAANIANIKQGKQIH 640
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
M K G D+ VSNALI Y KC +E+ + F MPE+N VSWN++I G+S++G+
Sbjct: 641 AMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGN 700
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L KM + G +P+ +T V VL
Sbjct: 701 EAVNLFEKMK--QVGEMPNHVTFVGVL 725
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 124/240 (51%), Gaps = 11/240 (4%)
Query: 76 ESKSLNKALSL----LQENLHNADLKEATGVLLQAC-GHEKDIEIGKRVHELVSASTQFS 130
E K N+ L L ++EN+ ++ A+ +L+AC GH I +++H +
Sbjct: 88 EKKMSNRVLDLFSCMIEENVSPTEISFAS--VLRACSGHRIGIRYAEQIHARIICHGLLC 145
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
+ II+ LI +Y+ G + +R+VFD+L T++ W A++SGF++N + + +F E+
Sbjct: 146 SP-IISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEM 204
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
+ + P + F V+ C I G +H + K G + +V NAL+ +Y +
Sbjct: 205 HT-AGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPN 263
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F M ++ VS+NS+I G ++ GFS + +L KM + PD +TV ++L
Sbjct: 264 FVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMK--RDYLKPDCVTVASLL 321
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 101/190 (53%), Gaps = 2/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C +++G+++H V T F + + + LI MY+ G + + +L
Sbjct: 421 ILRTCTSVGALDLGEQIHTQV-IKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTED 479
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W AL+SG+ ++ L+ + L F E+ + ++ DN F I AC GI + G +
Sbjct: 480 DVVSWTALISGYAQHNLFAEALKHFKEML-NRGIQSDNIGFSSAISACAGIQALNQGRQI 538
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G D+ + NAL+++Y +C ++E FE + ++ +SWN +I GF+++G+
Sbjct: 539 HAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYC 598
Query: 283 CESFDLLIKM 292
++ + +M
Sbjct: 599 EDALKVFAQM 608
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 93/191 (48%), Gaps = 2/191 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + G+++H V S+D I+ L+ +Y C + +F + +T
Sbjct: 320 LLSACASNGALCKGEQLHSYV-IKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTE 378
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN ++ F K + ++ IF ++ L P+ FT+P +++ C + + G +
Sbjct: 379 NVVLWNVMLVAFGKLDNLSESFRIFRQMQIKG-LIPNQFTYPSILRTCTSVGALDLGEQI 437
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G +V+V + LI MY K ++ + + E ++VSW ++I G++++
Sbjct: 438 HTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLF 497
Query: 283 CESFDLLIKMM 293
E+ +M+
Sbjct: 498 AEALKHFKEML 508
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C K ++G+++H LV ++ N L+T+YS + + +VF ++++
Sbjct: 219 VLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNA-LVTLYSRMPNFVSAEKVFSKMQSK 277
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ +N+L+SG + L +F ++ D LKPD T ++ AC + G +
Sbjct: 278 DEVSFNSLISGLAQQGFSDGALELFTKMKRDY-LKPDCVTVASLLSACASNGALCKGEQL 336
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G+ D+ V AL+ +Y C+ ++ ++F N+V WN ++ F +
Sbjct: 337 HSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNL 396
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
ESF + +M +G IP+ T ++L
Sbjct: 397 SESFRIFRQMQ--IKGLIPNQFTYPSIL 422
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 86/165 (52%), Gaps = 2/165 (1%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F N+ ++ +L+ +Y G +VF+ + R++ W+ ++SGF + ++ VL +F
Sbjct: 41 FGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFS 100
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIA-DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+ + + P +F V++AC G + + +H GL+ +SN LI +Y K
Sbjct: 101 CMIEEN-VSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAK 159
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ K+F+ + ++ VSW ++I GFS+NG+ E+ L +M
Sbjct: 160 NGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEM 204
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG K+G + + N L+ +Y ++ +VK+FE MP R++ SW+ II GF E
Sbjct: 32 LHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKM 91
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S DL M+ EE P I+ +VL
Sbjct: 92 SNRVLDLFSCMI--EENVSPTEISFASVL 118
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 118/209 (56%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LLQ+C K + GK++H + ++ D + T+L+ +Y++ L++R +FD +
Sbjct: 53 LLQSCIDSKALNPGKQLHAQFYHLGIAYNQD--LATKLVHLYAVSNSLLNARNLFDKIPK 110
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+NLF WN L+ G+ N + + + ++ ++ D L+PDNFT P V+KAC ++ +G G
Sbjct: 111 QNLFLWNVLIRGYAWNGPHDNAIILYHKML-DYGLRPDNFTLPFVLKACSALSAIGEGRS 169
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K G D+FV ALI MY KC V + ++F+ + R+ V WNS++ +++NG
Sbjct: 170 IHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGH 229
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
ES L +M G P T+VTV+
Sbjct: 230 PDESISLCREMAA--NGVRPTEATLVTVI 256
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 113/208 (54%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC I G+ +HE V S + D + LI MY+ CG +D+ RVFD + R
Sbjct: 154 VLKACSALSAIGEGRSIHEYVIKSG-WERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVR 212
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN++++ + +N + +S+ E++++ ++P T VI + +A + +G +
Sbjct: 213 DAVLWNSMLAAYAQNGHPDESISLCREMAANG-VRPTEATLVTVISSSADVACLPYGREI 271
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + G + V ALI MY KC V+ + LFE + E+ +VSWN+II G++ +G +
Sbjct: 272 HGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLA 331
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ DL KM + PD IT V VL
Sbjct: 332 VGALDLFDKMRKEDR---PDHITFVGVL 356
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 4/147 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+ +H SND + T LI MY+ CG + +F+ L+ + + WNA+++G+
Sbjct: 268 GREIHGFGWRHGFQSND-KVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYA 326
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG-MAAKMGLIGD 234
+ L L +F ++ E +PD+ TF V+ AC + G ++ M G+
Sbjct: 327 MHGLAVGALDLFDKMRK--EDRPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPT 384
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVM 261
V +I + G C ++E L M
Sbjct: 385 VQHYTCMIDLLGHCGQLDEAYDLIRNM 411
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
++ + ++++C + G +H +G+ + ++ L+ +Y + LF+
Sbjct: 47 HYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFD 106
Query: 260 VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+P++NL WN +I G++ NG + L KM+ + G PD T+ VL
Sbjct: 107 KIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKML--DYGLRPDNFTLPFVL 155
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L G D+ IGK++H + S D + N LI MYS CG ++ F +
Sbjct: 341 ATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNA-LIDMYSKCGMLDAAKSNFSNRS 399
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
++ W AL++G+ +N + + L +F ++ L+PD TF +IKA +A +G G
Sbjct: 400 EKSAISWTALITGYVQNGQHEEALQLFSDMRR-AGLRPDRATFSSIIKASSSLAMIGLGR 458
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H + G VF + L+ MY KC ++E ++ F+ MPERN +SWN++I ++ G
Sbjct: 459 QLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYG 518
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + + M+ C GF PD +T ++VL
Sbjct: 519 EAKNAIKMFEGMLHC--GFNPDSVTFLSVL 546
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
+G +VH LV ST N F+ N L+ YS C D RR+FD + R+ +N +++ +
Sbjct: 254 LGHQVHALVLRSTSVLNVFV-NNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAY 312
Query: 175 TKNELYTDVLSIFVELSS---DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
N+ VL +F E+ D ++ P + ++ G + DV G +H +GL
Sbjct: 313 AWNQCAATVLRLFREMQKLGFDRQVLP----YATMLSVAGSLPDVHIGKQIHAQLVLLGL 368
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
+ + NALI MY KC ++ F E++ +SW ++I G+ +NG E+ L
Sbjct: 369 ASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSD 428
Query: 292 MMGCEEGFIPDVITVVTVL 310
M G PD T +++
Sbjct: 429 MR--RAGLRPDRATFSSII 445
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 94/178 (52%), Gaps = 4/178 (2%)
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
F+ NT L+ Y G +RRVF + ++ +NA++ G +K L+T L +F +
Sbjct: 171 FVCNT-LLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRR 229
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ +FTF ++ G+A + G VH + + + +VFV+N+L+ Y KC ++
Sbjct: 230 -AGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLD 288
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+M +LF+ MPER+ VS+N II ++ N + L +M + GF V+ T+L
Sbjct: 289 DMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQ--KLGFDRQVLPYATML 344
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 7/162 (4%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
N F +N +++ YS G ++ +F S RN W ++ +D LS+F +
Sbjct: 73 NIFSLNL-ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM 131
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
+ + PD T V+ G +H A K GL VFV N L+ Y K
Sbjct: 132 LGEGVI-PDRVTVTTVLNLPGCTV-----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGL 185
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ ++F M +++ V++N+++ G S+ G ++ L M
Sbjct: 186 LAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAM 227
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
++F N +++ Y + LF P RN +W ++ + G + ++ L M+
Sbjct: 73 NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 132
Query: 294 GCEEGFIPDVITVVTVL 310
G EG IPD +TV TVL
Sbjct: 133 G--EGVIPDRVTVTTVL 147
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 113/199 (56%), Gaps = 3/199 (1%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
D+ +G+ +H +V S F + + L+ +Y+ CG + +VFD + ++L WN+++
Sbjct: 3 DVRLGETIHSVVIRSG-FGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 61
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
+GF +N + L+++ E++S +KPD FT ++ AC I + G VH K+GL
Sbjct: 62 NGFAENGKPEEALALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
++ SN L+ +Y +C VEE LF+ M ++N VSW S+I G + NGF E+ +L K
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF-K 179
Query: 292 MMGCEEGFIPDVITVVTVL 310
M EG +P IT V +L
Sbjct: 180 YMESTEGLLPCEITFVGIL 198
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
+ADV G +H + + G ++V N+L+ +Y C V K+F+ MPE++LV+WNS+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I GF+ENG E+ L +M +G PD T+V++L
Sbjct: 61 INGFAENGKPEEALALYTEMNS--KGIKPDGFTIVSLL 96
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 82/183 (44%), Gaps = 5/183 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + +GKRVH + + + + L+ +Y+ CG +++ +FD + +
Sbjct: 95 LLSACAKIGALTLGKRVH-VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK 153
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGS 220
N W +L+ G N + + +F + S L P TF ++ AC G+ GF
Sbjct: 154 NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF-E 212
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSEN 279
M + + + ++ + + V++ + + MP + N+V W +++ + +
Sbjct: 213 YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 272
Query: 280 GFS 282
G S
Sbjct: 273 GDS 275
>gi|255549932|ref|XP_002516017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544922|gb|EEF46437.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 472
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 114/211 (54%), Gaps = 6/211 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
LQ+C +K + GK++H L QF D ++ +L+ +Y +C ++R +FD +
Sbjct: 91 AAFLQSCITQKALIPGKQLHASLCHVGLQF--DRVLAPKLVNLYCICNSLCEARLLFDKI 148
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
RNLF WN L+ G+ Y + ++ ++ D L PDNFTFP V+KAC ++ + G
Sbjct: 149 PKRNLFLWNVLIRGYAWYGPYEASIQLYYKIF-DYGLVPDNFTFPFVLKACSALSAIEDG 207
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H + G DVFV ALI MY KC V+ ++F P R+ V WNS++ +S+N
Sbjct: 208 RLIHEQVMRSGWERDVFVGAALIDMYSKCGCVDNAREVFHKFPVRDAVLWNSMLAAYSQN 267
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G +S L +M+ G P T+VTV+
Sbjct: 268 GKPDKSLALCSEMV--LAGVRPTEATLVTVI 296
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 106/208 (50%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC IE G+ +HE V S + D + LI MYS CG ++R VF R
Sbjct: 194 VLKACSALSAIEDGRLIHEQVMRSG-WERDVFVGAALIDMYSKCGCVDNAREVFHKFPVR 252
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN++++ +++N L++ E+ ++P T VI A IA + G +
Sbjct: 253 DAVLWNSMLAAYSQNGKPDKSLALCSEMVL-AGVRPTEATLVTVISASADIAALPQGREL 311
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A + + V LI MY KC ++ LFE + ++N+VSWN+II G++ +G+S
Sbjct: 312 HGFAWRRRFESNDKVKTTLIDMYAKCGTMKVAQNLFEQLRDKNVVSWNAIITGYAMHGYS 371
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E L +M E PD IT V VL
Sbjct: 372 NEVLILFDRM---REEAKPDHITFVGVL 396
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 81 NKALSLLQENLHNADLKEATGVLLQACGHEKDIEI---GKRVHELVSASTQFSNDFIINT 137
+K+L+L E + A ++ L+ DI G+ +H SND + T
Sbjct: 271 DKSLALCSEMVL-AGVRPTEATLVTVISASADIAALPQGRELHGFAWRRRFESND-KVKT 328
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
LI MY+ CG ++ +F+ L+ +N+ WNA+++G+ + +VL +F + E K
Sbjct: 329 TLIDMYAKCGTMKVAQNLFEQLRDKNVVSWNAIITGYAMHGYSNEVLILFDRMRE--EAK 386
Query: 198 PDNFTFPCVIKAC--GGIADVGF 218
PD+ TF V+ AC GG+ D F
Sbjct: 387 PDHITFVGVLLACSNGGLLDKEF 409
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 123/245 (50%), Gaps = 40/245 (16%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC + G ++H V S +F ND I+ L+ MY+ CG ++R VFD + R
Sbjct: 263 VVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVR 322
Query: 163 N-------------------------------LFQWNALVSGFTKNELYTDVLSIFVELS 191
N + WNAL++G+T+N + L +F L
Sbjct: 323 NAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLK 382
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI------GDVFVSNALIAMY 245
++ + P ++TF ++ A +AD+ G H K G D+FV N+LI MY
Sbjct: 383 RES-VCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMY 441
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
KC VEE +++FE M E++ VSWN++I G+++NG+ E+ +L KM+ E G PD +T
Sbjct: 442 MKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKML--ESGEKPDHVT 499
Query: 306 VVTVL 310
++ L
Sbjct: 500 MIGTL 504
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 116/239 (48%), Gaps = 35/239 (14%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL C + + VH + T F + I RLI +Y CG+ +R+VFD + R
Sbjct: 30 LLDLCVKLRSSRDARSVHGRL-IQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSER 88
Query: 163 NLFQ-------------------------------WNALVSGFTKNELYTDVLSIFVELS 191
N+F WN++++GF +++ + + L FV +
Sbjct: 89 NVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMH 148
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
D + ++++F + AC + D+ G+ +HG+ +K DVF+ + LI Y KC V
Sbjct: 149 RD-DFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLV 207
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F+ M E+N+VSWN +I + +NG + E+ + +M E GF PD +T+ +V+
Sbjct: 208 GCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMT--ELGFKPDEVTLASVV 264
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 106/221 (47%), Gaps = 34/221 (15%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G L AC KD+++G ++H L+S S ++S D + + LI YS CG +RRVFD ++
Sbjct: 160 GSGLSACSRLKDLKLGAQIHGLISKS-KYSLDVFMGSGLIDFYSKCGLVGCARRVFDGME 218
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+N+ WN L++ + +N + L F ++ + KPD T V+ AC +A G
Sbjct: 219 EKNVVSWNCLITCYEQNGPAIEALEAFGRMT-ELGFKPDEVTLASVVSACATLAAFKEGV 277
Query: 221 GVHGMAAKMG-LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN-------------- 265
+H K D+ + NAL+ MY KC V E +F+ MP RN
Sbjct: 278 QIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKS 337
Query: 266 -----------------LVSWNSIICGFSENGFSCESFDLL 289
+VSWN++I G+++NG + E+ L
Sbjct: 338 ASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLF 378
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 8/180 (4%)
Query: 101 GVLLQACGHEKDIEIGKRVH-ELVSASTQFSN----DFIINTRLITMYSLCGFPLDSRRV 155
G LL A + D+E+G++ H +V +F + D + LI MY CG + RV
Sbjct: 394 GNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRV 453
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
F+++ ++ WN ++ G+ +N + L +F ++ E KPD+ T + AC
Sbjct: 454 FENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGE-KPDHVTMIGTLCACSHAGL 512
Query: 216 VGFGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSII 273
V G M + GL+ ++ + G+ +EE L E MP++ + V W+S++
Sbjct: 513 VEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLL 572
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%)
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D+ F ++ C + VHG + +VF+ N LI +YGKC +++ K+F
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 259 EVMPERNLVSWNSIICGFSENGFSCES 285
+ M ERN+ S+NSII GF ES
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDES 109
>gi|297841913|ref|XP_002888838.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334679|gb|EFH65097.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 688
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 142/274 (51%), Gaps = 14/274 (5%)
Query: 44 FKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEAT--G 101
F+E+ + S ++ + +H ++I ++ +L AL++L AT
Sbjct: 58 FRERDAFPSSLPLHSKNPHSIH--RDIQRFARKN-NLEDALTILDYLEQRGIPVNATTFS 114
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL AC K + GK+VH + + SN+FI T+L+ MY+ CG D+++VFD +
Sbjct: 115 ALLAACVRRKSLLHGKQVHVHIRINGLESNEFI-RTKLVHMYTACGSVRDAQKVFDESTS 173
Query: 162 RNLFQWNALVSG--FTKNELYTDVLSIFVELSSDTELKPD--NFTFPCVIKACGGIADVG 217
N++ WNAL+ G + + Y DVLS F E+ EL D ++F V K+ G + +
Sbjct: 174 SNVYSWNALLRGTVISGKKRYQDVLSTFTEMR---ELGVDLNVYSFSNVFKSFAGASALR 230
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G H +A K GL VF+ +L+ MY KC V ++F+ + ER++V W ++I G +
Sbjct: 231 QGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLA 290
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
N E+ L M+ EEG P+ + + T+LP
Sbjct: 291 HNKRQWEALGLFRSMIS-EEGIYPNSVILTTILP 323
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 101/197 (51%), Gaps = 4/197 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G + H L + F N + T L+ MY CG +RRVFD + R++ W A+++G
Sbjct: 232 GLKTHALAIKNGLF-NSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLA 290
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM-GLIGD 234
N+ + L +F + S+ + P++ ++ G + + G VH KM +
Sbjct: 291 HNKRQWEALGLFRSMISEEGIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKMKNYLEQ 350
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
FV + LI +Y KC + ++F +RN +SW +++ G++ NG ++ ++ M
Sbjct: 351 PFVHSGLIDLYCKCGDMVSGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQ- 409
Query: 295 CEEGFIPDVITVVTVLP 311
+EGF PDV+T+ TVLP
Sbjct: 410 -QEGFKPDVVTIATVLP 425
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L G K +++GK VH V + +++ LI +Y CG + RRVF K R
Sbjct: 321 ILPVLGDVKALKLGKEVHAHVLKMKNYLEQPFVHSGLIDLYCKCGDMVSGRRVFYGSKQR 380
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N W AL+SG+ N + L V + + KPD T V+ C + + G +
Sbjct: 381 NAISWTALMSGYAANGRFDQALRSIVWMQQEG-FKPDVVTIATVLPVCAELRAIKQGKEI 439
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K + +V + +L+ MY KC E V+LF+ + +RN+ +W ++I + ENG
Sbjct: 440 HCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPVRLFDRLEQRNVKAWTAMIDCYVENGDL 499
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ M+ + PD +T+ VL
Sbjct: 500 RAGIEVFRSMLLSKHR--PDSVTMGRVL 525
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLIT----MYSLCGFPLDSRRVF 156
+L C + I+ GK +H N F+ N L+T MYS CG P R+F
Sbjct: 421 ATVLPVCAELRAIKQGKEIH-----CYALKNLFLPNVSLVTSLMVMYSKCGVPEYPVRLF 475
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
D L+ RN+ W A++ + +N + +F + ++ +PD+ T V+ C + +
Sbjct: 476 DRLEQRNVKAWTAMIDCYVENGDLRAGIEVFRSMLL-SKHRPDSVTMGRVLTVCSDLKAL 534
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G +HG K FVS +I MYG+C + F+ + + ++W +II +
Sbjct: 535 KLGKELHGHILKKEFESIPFVSAKIIKMYGQCGDLRSANFSFDAVVVKGSLTWTAIIEAY 594
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
NG ++ +M+ GF P+ T +L
Sbjct: 595 GYNGRFRDAIKCFEQMV--SRGFTPNTFTFTAIL 626
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 2/208 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG D+++G V E V + + ++ + + LI MY CG + +RR+FDS+K +
Sbjct: 234 VLGACGELGDLKLGTWVEEFV-VENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKK 292
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA+++G+ +N + + + +F ++ + PD T ++ AC I + G V
Sbjct: 293 DKVTWNAMITGYAQNGMSEEAIKLFQDMRMSST-APDQITLIGILSACASIGALDLGKQV 351
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
A++ G DV+V AL+ MY KC ++ ++F MP +N VSWN++I + +G +
Sbjct: 352 EIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQA 411
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L MM P+ IT V VL
Sbjct: 412 QEALALFKSMMNEGGTVSPNDITFVGVL 439
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 127/253 (50%), Gaps = 11/253 (4%)
Query: 58 NASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGK 117
N +GL ++L E S K L L NL L AC + +E G+
Sbjct: 95 NVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNL-------TYPFLFIACSNLLAVENGR 147
Query: 118 RVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKN 177
H V D ++ LITMY+ CG D+R+VFD + ++L WN+++SG++K
Sbjct: 148 MGHCSV-IRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKM 206
Query: 178 ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFV 237
+ + +F E+ + +P+ + V+ ACG + D+ G+ V + + + F+
Sbjct: 207 RHAGEAVGLFREMM-EAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFM 265
Query: 238 SNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEE 297
+ALI MYGKC + ++F+ M +++ V+WN++I G+++NG S E+ L M
Sbjct: 266 GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSST 325
Query: 298 GFIPDVITVVTVL 310
PD IT++ +L
Sbjct: 326 A--PDQITLIGIL 336
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 114/235 (48%), Gaps = 12/235 (5%)
Query: 77 SKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFII 135
S+ LN + N + L + LLQ C K + K++H +L++ S N F
Sbjct: 12 SRYLNLQKPHSKPNPNRQALSDKFNSLLQQCLSIKQL---KQIHAQLLTNSIHKPNSF-- 66
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
L + L F S F ++ + +N ++ G + + + F
Sbjct: 67 ---LYKIADLKDFAYASV-FFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLG 122
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
LKP+N T+P + AC + V G H + GL D VS++LI MY +C + +
Sbjct: 123 LKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDAR 182
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F+ + +++LVSWNS+I G+S+ + E+ L +MM E GF P+ +++V+VL
Sbjct: 183 KVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMM--EAGFQPNEMSLVSVL 235
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +++GK+V E+ ++ F +D + T L+ MY+ CG ++ RVF + +
Sbjct: 335 ILSACASIGALDLGKQV-EIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNK 393
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDT-ELKPDNFTFPCVIKAC--GGIADVGFG 219
N WNA++S + + L++F + ++ + P++ TF V+ AC G+ D G
Sbjct: 394 NEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEG-R 452
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
H M++ GL+ + + ++ ++ + +EE MPE+
Sbjct: 453 RLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEK 497
>gi|145340387|ref|NP_193587.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236144|sp|Q0WNP3.1|PP319_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18520
gi|110738662|dbj|BAF01256.1| hypothetical protein [Arabidopsis thaliana]
gi|332658657|gb|AEE84057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 617
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG + +GK +H + ++ N +I +T L+ +Y CG D+ V L +R
Sbjct: 391 ILRACGSVGALLLGKELHAQIIKNSIEKNVYIGST-LVWLYCKCGESRDAFNVLQQLPSR 449
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W A++SG + ++ L E+ + ++P+ FT+ +KAC + G +
Sbjct: 450 DVVSWTAMISGCSSLGHESEALDFLKEMIQEG-VEPNPFTYSSALKACANSESLLIGRSI 508
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A K + +VFV +ALI MY KC FV E ++F+ MPE+NLVSW ++I G++ NGF
Sbjct: 509 HSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFC 568
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L+ +M EGF D T+L
Sbjct: 569 REALKLMYRMEA--EGFEVDDYIFATIL 594
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC EK + G++VH LV D + T L+ MY+ CG D R+VFD + R
Sbjct: 290 ILKACSEEKALRFGRQVHSLV-VKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNR 348
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N W ++++ + + +S+F + L +N T +++ACG + + G +
Sbjct: 349 NTVTWTSIIAAHAREGFGEEAISLF-RIMKRRHLIANNLTVVSILRACGSVGALLLGKEL 407
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K + +V++ + L+ +Y KC + + + +P R++VSW ++I G S G
Sbjct: 408 HAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHE 467
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ D L +M+ +EG P+ T + L
Sbjct: 468 SEALDFLKEMI--QEGVEPNPFTYSSALK 494
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 7/209 (3%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL C + E+G++VH +V + I+ + L+ Y+ CG + R FD ++
Sbjct: 190 LLNLCSRRAEFELGRQVHGNMVKVGV---GNLIVESSLVYFYAQCGELTSALRAFDMMEE 246
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+++ W A++S ++ + +F+ + + L P+ FT ++KAC + FG
Sbjct: 247 KDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFL-PNEFTVCSILKACSEEKALRFGRQ 305
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH + K + DVFV +L+ MY KC + + K+F+ M RN V+W SII + GF
Sbjct: 306 VHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGF 365
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M I + +TVV++L
Sbjct: 366 GEEAISLFRIMK--RRHLIANNLTVVSIL 392
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 98/196 (50%), Gaps = 6/196 (3%)
Query: 117 KRVHELVSASTQFSNDFI-INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
KR+H + A F + I LI+ G + +R+VFDS+ +N W A++ G+
Sbjct: 102 KRIHAM--ALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYL 159
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
K L + ++F + + F C++ C A+ G VHG K+G +G++
Sbjct: 160 KYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG-VGNL 218
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
V ++L+ Y +C + ++ F++M E++++SW ++I S G ++ + I M+
Sbjct: 219 IVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLN- 277
Query: 296 EEGFIPDVITVVTVLP 311
F+P+ TV ++L
Sbjct: 278 -HWFLPNEFTVCSILK 292
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 108/195 (55%), Gaps = 3/195 (1%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+++H L+ F + + T L+ MY+ C + RVFD + RNL WN+++ GF
Sbjct: 29 GQQLHSLIHKHG-FDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFF 87
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
N LY + +F ++ + + P+ + V+ AC + + FG VHG+ K GL+
Sbjct: 88 HNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLT 147
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+V N+L+ MY KC F +E VKLF+ + +R++V+WN ++ GF +N E+ + M
Sbjct: 148 YVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMR-- 205
Query: 296 EEGFIPDVITVVTVL 310
EG +PD + TVL
Sbjct: 206 REGILPDEASFSTVL 220
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 109/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + + G++VH +V +++N+ L+ MY C F + ++F + R
Sbjct: 118 VLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNS-LMDMYFKCRFFDEGVKLFQCVGDR 176
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN LV GF +N+ + + + F + + L PD +F V+ + +A + G+ +
Sbjct: 177 DVVTWNVLVMGFVQNDKFEEACNYFWVMRREGIL-PDEASFSTVLHSSASLAALHQGTAI 235
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K+G + ++ + +LI MY KC + + ++FE + + N++SW ++I + +G +
Sbjct: 236 HDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCA 295
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L M+ EG P +T V VL
Sbjct: 296 NQVIELFEHML--SEGIEPSHVTFVCVL 321
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
P+ FTF ++ A V G +H + K G ++FV AL+ MY KCA + V++
Sbjct: 8 PNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRV 67
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ MPERNLVSWNS+I GF N + + ++ E+ IP+ ++V +VL
Sbjct: 68 FDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLR-EKTVIPNEVSVSSVL 119
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G +H+ + N I+ + LITMY+ CG +D+ +VF+ ++ N+ W A++S +
Sbjct: 232 GTAIHDQIIKLGYVKNMCILGS-LITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQ 290
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+ V+ +F + S+ ++P + TF CV+ AC V G K+ +
Sbjct: 291 LHGCANQVIELFEHMLSEG-IEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPG 349
Query: 236 FVSNA-LIAMYGKCAFVEEMVKLFEVMPERNLVS-WNSII 273
A ++ + G+ +++E + E MP + S W +++
Sbjct: 350 PEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALL 389
>gi|224140139|ref|XP_002323442.1| predicted protein [Populus trichocarpa]
gi|222868072|gb|EEF05203.1| predicted protein [Populus trichocarpa]
Length = 526
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 117/207 (56%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ +C +D+ G + H L ++ +N +I + L+T Y CG ++ +VF + RN
Sbjct: 135 VSSCASTRDLRGGIQYHCLAISAGFIANAYI-GSSLVTFYGKCGELDNAYKVFKEMPVRN 193
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W A++SGF ++ L ++ L ++ LKP++FTF ++ AC G +G G H
Sbjct: 194 VVSWTAIISGFAQDWQVDMCLQLYC-LMRNSTLKPNDFTFTSLLSACTGSGALGQGRSAH 252
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+MG + + ++NAL++MY KC VE+ +FE M +++VSWNS+I G++++G +
Sbjct: 253 CQIIEMGFVSYLHIANALVSMYCKCGNVEDAFHIFENMVGKDIVSWNSMIAGYAQHGLAV 312
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L +M +G PD IT + VL
Sbjct: 313 QGIGLFERMK--SQGVKPDAITFLGVL 337
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 80/172 (46%), Gaps = 3/172 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + G+ H + F + I L++MY CG D+ +F+++ +
Sbjct: 235 LLSACTGSGALGQGRSAHCQI-IEMGFVSYLHIANALVSMYCKCGNVEDAFHIFENMVGK 293
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN++++G+ ++ L + +F + S +KPD TF V+ +C V G
Sbjct: 294 DIVSWNSMIAGYAQHGLAVQGIGLFERMKSQG-VKPDAITFLGVLSSCRHAGFVEGGRNY 352
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
+ G+ ++ + ++ + G+ +EE E MP N V W S++
Sbjct: 353 FNSMVEYGVKPELDHYSCIVDLLGRAGLLEEAQYFIERMPVSPNAVIWGSLV 404
>gi|302782183|ref|XP_002972865.1| hypothetical protein SELMODRAFT_51647 [Selaginella moellendorffii]
gi|300159466|gb|EFJ26086.1| hypothetical protein SELMODRAFT_51647 [Selaginella moellendorffii]
Length = 597
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 121/222 (54%), Gaps = 11/222 (4%)
Query: 96 LKEATGVL------LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFP 149
++E G++ L A K++ G+++HEL + + +D + T ++TMY
Sbjct: 72 IREEPGIIPTRITFLHALEKLKNLAEGRKIHEL-AITVGLESDPAVGTAIVTMYGKSRSL 130
Query: 150 LDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKA 209
D++RVFD LK R++ W AL++ +T+N + L ++ + D + P+ +TF VI A
Sbjct: 131 ADAKRVFDQLKRRDVVAWTALITAYTQNGHCEEALDLYSSMDPDG-VAPNQYTFTIVIDA 189
Query: 210 CGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSW 269
C + + G +H GL + V+N+LI +YG C + + ++F+ MP R+ VSW
Sbjct: 190 CAELGRLDVGIAIHARITAAGLESWIEVANSLINLYGNCKRLRDAERIFQRMPRRSSVSW 249
Query: 270 NSIICGFSENGFSCESFDLLIKMMGCEEGFIP-DVITVVTVL 310
NS+I ++ NG ++ DL +M G +G + D +T V VL
Sbjct: 250 NSMIAAYAHNGHPGDAIDLYKRMRG--DGSVKLDPVTFVNVL 289
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 107/209 (51%), Gaps = 2/209 (0%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+++ AC +++G +H ++A+ S + N+ LI +Y C D+ R+F +
Sbjct: 185 IVIDACAELGRLDVGIAIHARITAAGLESWIEVANS-LINLYGNCKRLRDAERIFQRMPR 243
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R+ WN++++ + N D + ++ + D +K D TF V+ AC D+ G
Sbjct: 244 RSSVSWNSMIAAYAHNGHPGDAIDLYKRMRGDGSVKLDPVTFVNVLGACYSQEDLAAGRS 303
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H A GL + +++A ++MYG+C VEE + FE M ++ V+W+++I ++NG
Sbjct: 304 IHRDAIARGLGSHLVLASAAVSMYGRCGSVEESMATFERMEIKDGVAWSAVIAALAQNGE 363
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S + +M+ P+ T ++VL
Sbjct: 364 SSSALHFYRRMIWSSSAR-PNEATFISVL 391
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 92/177 (51%), Gaps = 6/177 (3%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL-SSD 193
++ ++ MY CG D+ VF S++ RN+F WN +++ F +N +++F + +
Sbjct: 16 VSNMIVQMYGKCGSVDDAWIVFSSIQARNVFSWNMIIAAFAQNGHPERSVALFWRMIREE 75
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+ P TF ++ +A+ G +H +A +GL D V A++ MYGK + +
Sbjct: 76 PGIIPTRITFLHALEKLKNLAE---GRKIHELAITVGLESDPAVGTAIVTMYGKSRSLAD 132
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F+ + R++V+W ++I +++NG E+ DL M +G P+ T V+
Sbjct: 133 AKRVFDQLKRRDVVAWTALITAYTQNGHCEEALDLYSSM--DPDGVAPNQYTFTIVI 187
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 100/215 (46%), Gaps = 13/215 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC ++D+ G+ +H A + ++ + ++MY CG +S F+ ++ +
Sbjct: 288 VLGACYSQEDLAAGRSIHRDAIARG-LGSHLVLASAAVSMYGRCGSVEESMATFERMEIK 346
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W+A+++ +N + L + + + +P+ TF V++AC AD G +
Sbjct: 347 DGVAWSAVIAALAQNGESSSALHFYRRMIWSSSARPNEATFISVLEAC-SFADEGI--KI 403
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM-------PERNLVSWNSIICG 275
H G++ +S A+ MY KC ++ ++F M N VSW ++I
Sbjct: 404 HQHIVDSGIVHSTMISTAIFNMYAKCGRLDRAREIFSSMRASRGSFQSANDVSWMNMISA 463
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +G E+ +L +M EG P I +++L
Sbjct: 464 LARHGSIDEALELFREMR--LEGGKPSEIVFISIL 496
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+VSN ++ MYGKC V++ +F + RN+ SWN II F++NG S L +M+
Sbjct: 15 YVSNMIVQMYGKCGSVDDAWIVFSSIQARNVFSWNMIIAAFAQNGHPERSVALFWRMIRE 74
Query: 296 EEGFIPDVITVVTVL 310
E G IP IT + L
Sbjct: 75 EPGIIPTRITFLHAL 89
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 106/179 (59%), Gaps = 3/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + + +I Y CG ++RRVF K +++ W A++ G+ KN D L +F E+
Sbjct: 255 DQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEML 314
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ ++PD++T V+ +C +A + G VHG + GL ++ VS+ALI MY KC F+
Sbjct: 315 LE-HIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFI 373
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +F +MP RN+VSWN++I G ++NG ++ +L M+ ++ F PD +T + +L
Sbjct: 374 DDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENML--QQKFKPDNVTFIGIL 430
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 123/265 (46%), Gaps = 39/265 (14%)
Query: 82 KALSLLQENL-----HNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
KA S+L++++ + EA L+ C +I KR+ + D ++
Sbjct: 2 KAKSMLRQSVDLLCSRSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLH 61
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS------------------------ 172
+L+ +Y+ G D++ +FD + R+ F WNAL+S
Sbjct: 62 NQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSV 121
Query: 173 -------GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
GF+ N + L +F + + +P +T ++ A + D+ +G +HG
Sbjct: 122 SYNTTIAGFSGNSCPQESLELFKRMQREG-FEPTEYTIVSILNASAQLLDLRYGKQIHGS 180
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
+G+VF+ NAL MY KC +E+ LF+ + ++NLVSWN +I G+++NG +
Sbjct: 181 IIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKC 240
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
LL +M G +PD +T+ T++
Sbjct: 241 IGLLHQMR--LSGHMPDQVTMSTII 263
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ +C + G+ VH S +N+ ++++ LI MYS CGF D+R VF+ + TR
Sbjct: 328 VVSSCAKLASLHHGQAVHG-KSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTR 386
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG--- 219
N+ WNA++ G +N D L +F E + KPDN TF ++ AC + G
Sbjct: 387 NVVSWNAMIVGCAQNGHDKDALELF-ENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEY 445
Query: 220 ----SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIIC 274
S HGM + ++ + G+ +E+ V L + M + + + W++++
Sbjct: 446 FDSISNQHGMTPTLDHYA------CMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499
Query: 275 GFSENG 280
S G
Sbjct: 500 ICSTKG 505
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 39/208 (18%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L A D+ GK++H + N FI N L MY+ CG +R +FD L +
Sbjct: 161 ILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNA-LTDMYAKCGEIEQARWLFDCLTKK 219
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL WN ++SG+ KN +P+ C G+ +
Sbjct: 220 NLVSWNLMISGYAKNG------------------QPEK---------CIGL--------L 244
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H M G + D + +IA Y +C V+E ++F E+++V W +++ G+++NG
Sbjct: 245 HQMRLS-GHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGRE 303
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M+ E PD T+ +V+
Sbjct: 304 EDALLLFNEML--LEHIEPDSYTLSSVV 329
>gi|357490817|ref|XP_003615696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517031|gb|AES98654.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 148/267 (55%), Gaps = 18/267 (6%)
Query: 48 SSLSLSAKTNNASTQGLHFLQ----EITTLCEESKSLNKALSLLQENLHNA-DLKEATGV 102
SS ++A +NN ST + ++ LC SL++A+++L +K T +
Sbjct: 29 SSKRVNANSNNVSTTKPSIRKLIDSQLNQLCING-SLSEAVTILDSLAEQGCRVKPITYM 87
Query: 103 -LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LLQ+C + I IGK +H + + N F+ T+L++MY+ CG +R+VF+ +
Sbjct: 88 NLLQSCIDKDCIFIGKELHSRIGL-VENVNPFV-ETKLVSMYAKCGLLGMARKVFNEMSV 145
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
RNLF W+A++ G ++N+ + +V+ +F + D L PD F P V++ACG D+ G
Sbjct: 146 RNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVL-PDEFLLPKVLQACGKCRDLETGRL 204
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H M + G+ + N+++A+Y KC ++ K+F+ M ER+ V+WN++I GF +NG
Sbjct: 205 IHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIFDCMDERDSVAWNAMISGFCQNGE 264
Query: 282 SCES---FDLLIKMMGCEEGFIPDVIT 305
++ FD + K +G P ++T
Sbjct: 265 IGQAQKYFDAMQK-----DGVEPSLVT 286
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 81/143 (56%), Gaps = 3/143 (2%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+++ W +++SGFT+ + L + E+ ++ +N T AC + + G +
Sbjct: 318 DVYTWTSMISGFTQKGRISHALDLLKEMFL-AGVEANNITIASAASACAALKSLSMGLEI 376
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A KM L+ +V V N+LI MY KC ++ +F++M ER++ SWNSII G+ + GF
Sbjct: 377 HSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFC 436
Query: 283 CESFDLLIKMMGCEEGFIPDVIT 305
++ +L +KM E P++IT
Sbjct: 437 GKAHELFMKMQ--ESDSPPNIIT 457
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKT-----RNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
+IT Y G + +F S++ RN WN+L+SGF ++ L IF +
Sbjct: 461 MITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQF- 519
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+ P++ T ++ C + +H A + L+ ++ VSN LI Y K +
Sbjct: 520 CHILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGNLMY 579
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F + ++ VSWNS++ + +G S + DL +M ++G P+ T ++L
Sbjct: 580 SKNIFNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMR--KQGLQPNRGTFASIL 634
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 90/206 (43%), Gaps = 44/206 (21%)
Query: 111 KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNAL 170
K + +G +H ++ ++ ++ LI MY CG ++ +FD + R+++ WN++
Sbjct: 368 KSLSMGLEIHS-IAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSI 426
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
+ G+ + +F+++ +++ P+ T+
Sbjct: 427 IGGYFQAGFCGKAHELFMKM-QESDSPPNIITW--------------------------- 458
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVM-----PERNLVSWNSIICGFSENGFSCES 285
N +I Y + ++ + LF+ + +RN SWNS+I GF ++G ++
Sbjct: 459 --------NIMITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKA 510
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVLP 311
+ M C +P+ +T++++LP
Sbjct: 511 LQIFRNMQFCH--ILPNSVTILSILP 534
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 12/113 (10%)
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV--FVSNALIAMYGKCAFVEEMVKL 257
N C+ K C + G +H +++GL+ +V FV L++MY KC + K+
Sbjct: 88 NLLQSCIDKDC-----IFIGKELH---SRIGLVENVNPFVETKLVSMYAKCGLLGMARKV 139
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F M RNL +W+++I G S N E L MM +G +PD + VL
Sbjct: 140 FNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMM--RDGVLPDEFLLPKVL 190
>gi|302805448|ref|XP_002984475.1| hypothetical protein SELMODRAFT_180944 [Selaginella moellendorffii]
gi|300147863|gb|EFJ14525.1| hypothetical protein SELMODRAFT_180944 [Selaginella moellendorffii]
Length = 592
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 116/220 (52%), Gaps = 6/220 (2%)
Query: 94 ADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSR 153
A L++ +L+ C + +E G+RVH + S + F+ N L+ MY CG D+R
Sbjct: 9 AQLRQEYATILRKCARSRLLEDGRRVHARIIHSGHTRDRFLGNL-LVQMYRDCGRLEDAR 67
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL-SSDTELKPDNFTFPCVIKACGG 212
VFDS+ RN F W ++S + + L ++ L S TE++PD F F + AC
Sbjct: 68 AVFDSMPLRNEFSWAIIISAYVGAGKEQEALCLYRALVRSSTEIQPDAFIFSSALAACAR 127
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLV--SWN 270
+ + G +H K G+ DV + NAL+ MY KC ++ ++F+ + R++V SWN
Sbjct: 128 LKCLEQGLEIHEQIVKRGIKQDVGLQNALVTMYAKCGRIDRAKQVFDRITHRDVVVISWN 187
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++I GF +NG ++ +L +M EG P +T +VL
Sbjct: 188 AMIAGFGQNGRPKQALELFRRMD--LEGLQPSRMTYCSVL 225
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 11/211 (5%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC K +E G +HE + D + L+TMY+ CG +++VFD + R+
Sbjct: 122 LAACARLKCLEQGLEIHEQI-VKRGIKQDVGLQNALVTMYAKCGRIDRAKQVFDRITHRD 180
Query: 164 L--FQWNALVSGFTKNELYTDVLSIFVELSSDTE-LKPDNFTFPCVIKACGGIADVGFGS 220
+ WNA+++GF +N L +F + D E L+P T+ V+ AC + G
Sbjct: 181 VVVISWNAMIAGFGQNGRPKQALELFRRM--DLEGLQPSRMTYCSVLDACANLTASSLGR 238
Query: 221 GV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+ GM L D+ V+N++ MYGKC E + F M R++VSW +II +++N
Sbjct: 239 IICDGM--DEALAKDISVANSICNMYGKCGLPELARQTFLEMTYRDVVSWTAIIAAYAQN 296
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G+S E+ D+ M+ + G P+ IT++ L
Sbjct: 297 GYSSEALDIFRIMV--QAGVEPNGITLINTL 325
>gi|147784524|emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
Length = 763
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 121/229 (52%), Gaps = 6/229 (2%)
Query: 68 QEITTLCEESKSLN---KALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVS 124
+ ITTLC++ K N KA LQ+ L+ AC + + +E G+++H+ +
Sbjct: 32 EYITTLCKQ-KLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGRKIHDHML 90
Query: 125 ASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVL 184
S D + ++ MY CG D+++VFD++ RN+ W ++++G+++N + L
Sbjct: 91 KSKSHP-DLTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNAL 149
Query: 185 SIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAM 244
+ ++ + + PD FTF +IKAC + D+G G +H K + NALI+M
Sbjct: 150 EFYFQML-QSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISM 208
Query: 245 YGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
Y K + + + +F M R+L+SW S+I GFS+ G+ E+ +M+
Sbjct: 209 YTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEML 257
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 109/210 (51%), Gaps = 3/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +++AC DI +G+++H V S +F I LI+MY+ +D+ VF +
Sbjct: 168 GSIIKACSSLGDIGLGRQLHAHVLKS-EFGAHIIAQNALISMYTKSNVIIDALDVFSRMA 226
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
TR+L W ++++GF++ + L F E+ P+ F F V AC + +G
Sbjct: 227 TRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGR 286
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HGM+ K GL DVF +L MY KC + +F + +LV+WN+II GF+ G
Sbjct: 287 QLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGG 346
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ +M +G IPD ITV ++L
Sbjct: 347 DAKEAIAFFSQMR--HQGLIPDEITVRSLL 374
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 114/243 (46%), Gaps = 13/243 (5%)
Query: 69 EITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQ 128
E+ LC + L++ + L E + G + AC E G+++H + S
Sbjct: 246 ELEALCYFKEMLHQGVYLPNEFIF--------GSVFSACSSLLQPEYGRQLHGM-SIKFG 296
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
D L MY+ CG +R VF + +L WNA+++GF + ++ F
Sbjct: 297 LGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFS 356
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
++ L PD T ++ AC +++ G VHG KMGL DV V N L+ MY KC
Sbjct: 357 QMRHQG-LIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKC 415
Query: 249 AFVEEMVKLFEVMP-ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
+ + + + FE M +LVSWN+I+ + + E F LL K+M C PD IT+
Sbjct: 416 SELRDAIFFFEEMRCNADLVSWNAILTACMHHDQAEEVFGLL-KLM-CISQHRPDYITLT 473
Query: 308 TVL 310
VL
Sbjct: 474 NVL 476
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 115/233 (49%), Gaps = 7/233 (3%)
Query: 81 NKALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
+A++ + H + + V LL AC ++ G +VH ++ D +
Sbjct: 349 KEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYIN-KMGLDLDVPVCNT 407
Query: 139 LITMYSLCGFPLDSRRVFDSLK-TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L+TMY+ C D+ F+ ++ +L WNA+++ ++ +V + ++L ++ +
Sbjct: 408 LLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMHHDQAEEVFGL-LKLMCISQHR 466
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
PD T V+ A + G+ VH A K GL D+ V+N LI +Y KC ++ K+
Sbjct: 467 PDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDISVTNGLIDLYAKCGSLKTARKI 526
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ + ++VSW+S+I G+++ G+ E+ L M + P+ +T V VL
Sbjct: 527 FDSVINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLD--VKPNHVTFVGVL 577
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Query: 168 NALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAA 227
N ++ K +L+ + + F L T T+ +I AC + + G +H
Sbjct: 31 NEYITTLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGRKIHDHML 90
Query: 228 KMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFD 287
K D+ + N ++ MYGKC +++ K+F+ MPERN+VSW S+I G+S+NG + +
Sbjct: 91 KSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALE 150
Query: 288 LLIKMMGCEEGFIPDVITVVTVL 310
+M+ + G +PD T +++
Sbjct: 151 FYFQML--QSGVMPDQFTFGSII 171
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 70 ITTLC---EESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSAS 126
I T C ++++ + L L+ + H D T VL A IEIG +VH +
Sbjct: 440 ILTACMHHDQAEEVFGLLKLMCISQHRPDYITLTNVL-GASAETVSIEIGNQVH-CYALK 497
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
T + D + LI +Y+ CG +R++FDS+ ++ W++L+ G+ + + L +
Sbjct: 498 TGLNCDISVTNGLIDLYAKCGSLKTARKIFDSVINPDVVSWSSLILGYAQFGYGEEALKL 557
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG-MAAKMGLIGDVFVSNALIAMY 245
F + ++KP++ TF V+ AC + V G ++G M + G++ + ++ +
Sbjct: 558 FKTMRR-LDVKPNHVTFVGVLTACSHVGLVEEGWQLYGTMEKEFGIVPTREHCSCMVDLL 616
Query: 246 GKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
+ + E M + ++V W +++
Sbjct: 617 ARAGCLNEAEAFIHQMAFDPDIVVWKTLL 645
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 106/179 (59%), Gaps = 3/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + + +I Y CG ++RRVF K +++ W A++ G+ KN D L +F E+
Sbjct: 255 DQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEML 314
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ ++PD++T V+ +C +A + G VHG + GL ++ VS+ALI MY KC F+
Sbjct: 315 LE-HIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFI 373
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +F +MP RN+VSWN++I G ++NG ++ +L M+ ++ F PD +T + +L
Sbjct: 374 DDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENML--QQKFKPDNVTFIGIL 430
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 125/265 (47%), Gaps = 39/265 (14%)
Query: 82 KALSLLQENL-----HNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
KA S+L++++ + EA L+ C +I KR+ + D ++
Sbjct: 2 KAKSMLRQSVDLLCSRSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLH 61
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS------------------------ 172
+L+ +Y+ G D++ +FD + R++F WNAL+S
Sbjct: 62 NQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSV 121
Query: 173 -------GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
GF+ N + L +F + + +P +T ++ A ++D+ +G +HG
Sbjct: 122 SYNTTIAGFSGNSCPQESLELFKRMQREG-FEPTEYTIVSILNASAQLSDLRYGKQIHGS 180
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
+G+VF+ NAL MY KC +E+ LF+ + ++NLVSWN +I G+++NG +
Sbjct: 181 IIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKC 240
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
LL +M G +PD +T+ T++
Sbjct: 241 IGLLHQMR--LSGHMPDQVTMSTII 263
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 39/208 (18%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L A D+ GK++H + N FI N L MY+ CG +R +FD L +
Sbjct: 161 ILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNA-LTDMYAKCGEIEQARWLFDCLTKK 219
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL WN ++SG+ KN +P+ C G+ +
Sbjct: 220 NLVSWNLMISGYAKNG------------------QPEK---------CIGL--------L 244
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H M G + D + +IA Y +C V+E ++F E+++V W +++ G+++NG
Sbjct: 245 HQMRLS-GHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGRE 303
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M+ E PD T+ +V+
Sbjct: 304 EDALLLFNEML--LEHIEPDSYTLSSVV 329
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ +C + G+ VH S +N+ ++++ LI MYS CGF D+R VF+ + TR
Sbjct: 328 VVSSCAKLASLHHGQAVHG-KSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTR 386
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG--- 219
N+ WNA++ G +N D L +F + + KPDN TF ++ AC + G
Sbjct: 387 NVVSWNAMIVGCAQNGHDKDALELFENMLQQ-KFKPDNVTFIGILSACLHCNWIEQGQEY 445
Query: 220 ----SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIIC 274
+ HGM + ++ + G+ +E+ V L + M + + + W++++
Sbjct: 446 FDSITNQHGMTPTLDHYA------CMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499
Query: 275 GFSENG 280
S G
Sbjct: 500 ICSTKG 505
>gi|297800206|ref|XP_002867987.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297313823|gb|EFH44246.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 616
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG + +GK +H + ++ N +I +T L+ +Y CG D+ V L +R
Sbjct: 391 ILRACGSVGALLLGKELHAQIIKNSIEKNVYIGST-LVWLYCKCGESRDAFNVLQQLPSR 449
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W A++SG + ++ L E+ + ++P+ FT+ +KAC + G +
Sbjct: 450 DVVSWTAMISGCSSLGHESEALDFLKEMIQEG-VEPNPFTYSSALKACANSESLLIGRSI 508
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A K + +VFV +ALI MY KC FV E ++F+ MPE+NLVSW ++I G++ NGF
Sbjct: 509 HSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFC 568
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L+ +M EGF D T+L
Sbjct: 569 REALKLMYRMEA--EGFEVDDYIFATIL 594
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 119/244 (48%), Gaps = 6/244 (2%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSAST 127
+ + C NKA+ + L++ L V +L+AC EK I G++VH LV
Sbjct: 255 VISACSRKGHGNKAIFMFIGMLNHGFLPNEFTVCSILKACSEEKAIRFGRQVHSLV-VKR 313
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
D + T L+ MY+ CG D R+VFD + RN W ++++ + + +S+F
Sbjct: 314 MIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLF 373
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+ L +N T +++ACG + + G +H K + +V++ + L+ +Y K
Sbjct: 374 -RVMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCK 432
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
C + + + +P R++VSW ++I G S G E+ D L +M+ +EG P+ T
Sbjct: 433 CGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMI--QEGVEPNPFTYS 490
Query: 308 TVLP 311
+ L
Sbjct: 491 SALK 494
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 7/209 (3%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL C + E+G++VH +V + I+ + L+ Y+ CG + R FD ++
Sbjct: 190 LLNLCSRRSEFELGRQVHGNMVKVGV---GNLIVESSLVYFYAQCGELTSALRAFDMMEE 246
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+++ W A++S ++ + +F+ + + L P+ FT ++KAC + FG
Sbjct: 247 KDVISWTAVISACSRKGHGNKAIFMFIGMLNHGFL-PNEFTVCSILKACSEEKAIRFGRQ 305
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH + K + DVFV +L+ MY KC + + K+F+ M RN V+W SII + GF
Sbjct: 306 VHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGF 365
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M I + +TVV++L
Sbjct: 366 GEEAISLFRVMK--RRHLIANNLTVVSIL 392
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 99/196 (50%), Gaps = 6/196 (3%)
Query: 117 KRVHELVSASTQFSNDFI-INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
KR+H + A F + I LI+ G + +R+VFDS+ RN W A++ G+
Sbjct: 102 KRIHAM--ALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPDRNTVTWTAMIDGYL 159
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
K L + S+F + + F C++ C ++ G VHG K+G +G++
Sbjct: 160 KFGLEDEAFSLFEDYVKHGIRFTNERMFVCLLNLCSRRSEFELGRQVHGNMVKVG-VGNL 218
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
V ++L+ Y +C + ++ F++M E++++SW ++I S G ++ + I M+
Sbjct: 219 IVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGNKAIFMFIGMLN- 277
Query: 296 EEGFIPDVITVVTVLP 311
GF+P+ TV ++L
Sbjct: 278 -HGFLPNEFTVCSILK 292
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 104/200 (52%), Gaps = 9/200 (4%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSAST------QFSNDFIINTRLITMYSLCGFPLDSRR 154
L+ AC + + G+RVH + AS+ Q + + ++ LITMY C P +R+
Sbjct: 48 AALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQ 107
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE-LSSDTELKPDNFTFPCVIKACGGI 213
VFD + RN W ++++ +N D L +F L S T D F ++AC +
Sbjct: 108 VFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGT--AADQFALGSAVRACTEL 165
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
DVG G VH A K D+ V NAL+ MY K V++ LFE + +++L+SW SII
Sbjct: 166 GDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSII 225
Query: 274 CGFSENGFSCESFDLLIKMM 293
GF++ GF E+ + KM+
Sbjct: 226 AGFAQQGFEMEALQVFRKMI 245
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 3/212 (1%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A G ++AC D+ G++VH S + S D I+ L+TMYS G D +F+
Sbjct: 154 ALGSAVRACTELGDVGTGRQVHAHALKSERGS-DLIVQNALVTMYSKNGLVDDGFMLFER 212
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+K ++L W ++++GF + + L +F ++ + P+ F F +ACG + +
Sbjct: 213 IKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEY 272
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G +HG++ K L D++V +L MY + ++ F + +LVSWNSI+ +S
Sbjct: 273 GEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSV 332
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ L +M + G PD ITV +L
Sbjct: 333 EGLLSEALVLFSEMR--DSGLRPDGITVRGLL 362
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV-FDSL 159
G +ACG E G+++H L S + D + L MY+ LDS RV F +
Sbjct: 258 GSAFRACGAVGSWEYGEQIHGL-SIKYRLDRDLYVGCSLSDMYARFK-NLDSARVAFYRI 315
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+ +L WN++V+ ++ L ++ L +F E+ D+ L+PD T ++ AC G + G
Sbjct: 316 EAPDLVSWNSIVNAYSVEGLLSEALVLFSEMR-DSGLRPDGITVRGLLCACVGRDALYHG 374
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H K+GL GDV V N+L++MY +C+ + + +F + ++++V+WNSI+ +++
Sbjct: 375 RLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQH 434
Query: 280 GFSCESFDLL 289
E L
Sbjct: 435 NHPEEVLKLF 444
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + G+ +H + D + L++MY+ C + VF +K +
Sbjct: 361 LLCACVGRDALYHGRLIHSYL-VKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQ 419
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN++++ ++ +VL +F L + +E D + V+ A + V
Sbjct: 420 DVVTWNSILTACAQHNHPEEVLKLF-SLLNKSEPSLDRISLNNVLSASAELGYFEMVKQV 478
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENGF 281
H A K GL+ D +SN LI Y KC +++ ++LFE+M R++ SW+S+I G+++ G+
Sbjct: 479 HAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGY 538
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ DL +M G P+ +T + VL
Sbjct: 539 AKEALDLFSRMRSL--GIRPNHVTFIGVL 565
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 203 FPCVIKACGGIADVGFGSGVH-------GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
+ ++ AC + + G VH + L G+ + N LI MYG+CA +
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
++F+ MP RN VSW S+I +NG + ++ L M+
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSML 144
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 115/208 (55%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+A G D+ +G+ +H +V S F + + L+ +Y+ CG + +VFD + +
Sbjct: 127 LLKAVGKMADVRLGETIHSVVIRSG-FGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK 185
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN++++GF +N + L+++ E+ +KPD FT ++ AC I + G
Sbjct: 186 DLVAWNSVINGFAENGKPEEALALYTEMDLKG-IKPDGFTIVSLLSACAKIGALTLGKRF 244
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K+GL ++ SN L+ +Y +C VEE LF+ M ++N VSW S+I G + NG
Sbjct: 245 HVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLG 304
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L K M +EG +P IT V +L
Sbjct: 305 KEAIELF-KNMESKEGLLPCEITFVGIL 331
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 94/160 (58%), Gaps = 3/160 (1%)
Query: 152 SRRVFDSL-KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
+ +VF + K N+F WN L+ G+ + +S++ E+ + ++PD T+P ++KA
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAV 131
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
G +ADV G +H + + G ++V N+L+ +Y C V K+F+ MPE++LV+WN
Sbjct: 132 GKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S+I GF+ENG E+ L +M +G PD T+V++L
Sbjct: 192 SVINGFAENGKPEEALALYTEM--DLKGIKPDGFTIVSLL 229
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 82/183 (44%), Gaps = 5/183 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + +GKR H + + + + L+ +Y+ CG +++ +FD + +
Sbjct: 228 LLSACAKIGALTLGKRFH-VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK 286
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGS 220
N W +L+ G N L + + +F + S L P TF ++ AC G+ GF
Sbjct: 287 NSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGF-E 345
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSEN 279
M+ + + + ++ + + V++ + MP + N+V W +++ + +
Sbjct: 346 YFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVH 405
Query: 280 GFS 282
G S
Sbjct: 406 GDS 408
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 112/197 (56%), Gaps = 4/197 (2%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR-NLFQWNALVSG 173
+GK +H+ + S N+ + LI +Y C ++ VF +++ ++ WN L++
Sbjct: 213 LGKLIHQKI-VSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAA 271
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
TKN ++ + L +F L LKPD FT+P V+KAC G+ VG+G VH K G
Sbjct: 272 CTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAM 331
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
DV V ++ + MY KC E+ +KLF+ MPER++ SWN++I + ++G ++ +L +M
Sbjct: 332 DVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMK 391
Query: 294 GCEEGFIPDVITVVTVL 310
GF PD +T+ TV+
Sbjct: 392 --VSGFKPDSVTLTTVI 406
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC ++++GK +H + + D +N+ LI +Y CG + VF ++
Sbjct: 506 ILMACSRSVNLQLGKFIHGYI-IRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKT 564
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN ++SG+ K Y + L IF ++ +KPD TF V+ AC +A + G +
Sbjct: 565 NVVSWNVMISGYVKVGSYLEALVIFTDMRK-AGVKPDAITFTSVLPACSQLAVLEKGKEI 623
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + L + V AL+ MY KC V+E + +F +PER+ VSW S+I + +G +
Sbjct: 624 HNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQA 683
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L KM + PD +T + +L
Sbjct: 684 FEALKLFEKMQQSDAK--PDKVTFLAIL 709
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 113/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC + GK VH V S F+ D ++ + + MY+ C D+ ++FD + R
Sbjct: 304 VLKACSGLGRVGYGKMVHTHVIKSG-FAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPER 362
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN ++S + ++ L +F E+ + KPD+ T VI +C + D+ G +
Sbjct: 363 DVASWNNVISCYYQDGQPEKALELFEEMKV-SGFKPDSVTLTTVISSCARLLDLERGKEI 421
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G D FVS+AL+ MYGKC +E ++FE + +N+VSWNS+I G+S G S
Sbjct: 422 HMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDS 481
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+L +M EEG P + T+ ++L
Sbjct: 482 KSCIELFRRM--DEEGIRPTLTTLSSIL 507
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 113/210 (53%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++ +C D+E GK +H ELV + F+ D +++ L+ MY CG ++ VF+ ++
Sbjct: 405 VISSCARLLDLERGKEIHMELVRSG--FALDGFVSSALVDMYGKCGCLEMAKEVFEQIQR 462
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N+ WN++++G++ + +F + + ++P T ++ AC ++ G
Sbjct: 463 KNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEG-IRPTLTTLSSILMACSRSVNLQLGKF 521
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG + + D+FV+++LI +Y KC + +F+ MP+ N+VSWN +I G+ + G
Sbjct: 522 IHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGS 581
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ + M + G PD IT +VLP
Sbjct: 582 YLEALVIFTDMR--KAGVKPDAITFTSVLP 609
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E GK +H + S N+ ++ L+ MY+ CG ++ +F+ L R
Sbjct: 607 VLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGA-LLDMYAKCGAVDEALHIFNQLPER 665
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
+ W ++++ + + + L +F E ++ KPD TF ++ AC G+ D G
Sbjct: 666 DFVSWTSMIAAYGSHGQAFEALKLF-EKMQQSDAKPDKVTFLAILSACSHAGLVDEG-CY 723
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 263
+ M A+ G V + LI + G+ + E ++ + P+
Sbjct: 724 YFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPD 766
>gi|242076142|ref|XP_002448007.1| hypothetical protein SORBIDRAFT_06g019570 [Sorghum bicolor]
gi|241939190|gb|EES12335.1| hypothetical protein SORBIDRAFT_06g019570 [Sorghum bicolor]
Length = 458
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 120/228 (52%), Gaps = 8/228 (3%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHE--LVSAST 127
+ LC+E L +AL LL L A +E G +L + G+++H L + S
Sbjct: 47 LKRLCKEG-DLRQALRLLTARLPPA--REHYGWVLDLVAARRAAAEGRQLHAHALATGSL 103
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
+D + T+L+ MY CG D+RR+F+ + R +F WNALV + + + + ++
Sbjct: 104 DEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLTSGSAGEAMRVY 163
Query: 188 --VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
+ S+ PD T V+KACG D G VHG+A K+GL V+NALI MY
Sbjct: 164 GAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDRSTLVANALIGMY 223
Query: 246 GKCAFVEEMVKLFEVMPE-RNLVSWNSIICGFSENGFSCESFDLLIKM 292
KC ++ +++FE + + R++ SWNS+I G +NG + E+ L M
Sbjct: 224 AKCGLLDSALRVFEWLQDARDVASWNSVISGCVQNGRTLEALALFRVM 271
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-T 161
+L+ACG E D G VH L + ++ LI MY+ CG + RVF+ L+
Sbjct: 184 VLKACGAEGDGRCGGEVHGL-AVKVGLDRSTLVANALIGMYAKCGLLDSALRVFEWLQDA 242
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDT------ELKPD 199
R++ WN+++SG +N + L++F + S EL+PD
Sbjct: 243 RDVASWNSVISGCVQNGRTLEALALFRVMQSAGVANKLLELEPD 286
>gi|326519576|dbj|BAK00161.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 608
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 115/209 (55%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHEL-VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LLQ C + G++VH V + I T+L Y+ CG D+ RVFD+L
Sbjct: 73 LLQCCVAAGSLRAGRQVHAAAVKRGPYYCRHAYIGTKLAVFYARCGALADAERVFDALPK 132
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N F W A++ +++ L++ L +V++ + DNF P V+K+C GI VG G
Sbjct: 133 KNAFAWAAVIGLWSRAGLHSRALDGYVDML-QAGVPVDNFVVPNVLKSCAGIGMVGTGRA 191
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG A K G V+V ++L+ YGKC V++ ++F+ M E +V+WNS++ G+ NG
Sbjct: 192 LHGYAWKAGFRECVYVLSSLVDFYGKCGKVDDAREVFDAMTETTVVTWNSMLMGYINNGR 251
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L +M EG +P +++++ L
Sbjct: 252 IDDAVELFYQMR--VEGVLPTRVSLLSFL 278
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 122/265 (46%), Gaps = 17/265 (6%)
Query: 46 EKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQ 105
+K++ + +A S GLH S++L+ + +LQ + + +L+
Sbjct: 132 KKNAFAWAAVIGLWSRAGLH-----------SRALDGYVDMLQAGVPVDNFVVPN--VLK 178
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
+C + G+ +H + F + + L+ Y CG D+R VFD++ +
Sbjct: 179 SCAGIGMVGTGRALHGY-AWKAGFRECVYVLSSLVDFYGKCGKVDDAREVFDAMTETTVV 237
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
WN+++ G+ N D + +F ++ + L P + + A +G H M
Sbjct: 238 TWNSMLMGYINNGRIDDAVELFYQMRVEGVL-PTRVSLLSFLSASADFEAPDWGRQGHAM 296
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
A GL DV + +++I Y K VE +FE M ER+ V+WN +I G+ ++G + ++
Sbjct: 297 AVSGGLEMDVILGSSIINFYCKVGLVEAAEAVFEQMVERDAVTWNLMIAGYLQDGQTDKA 356
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
F KM+ E G D +T+ +++
Sbjct: 357 FITCRKML--ESGLRFDCVTLASII 379
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 87/186 (46%), Gaps = 4/186 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G++ H + + S D I+ + +I Y G + VF+ + R+ WN +++G+
Sbjct: 290 GRQGHAM-AVSGGLEMDVILGSSIINFYCKVGLVEAAEAVFEQMVERDAVTWNLMIAGYL 348
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
++ TD I ++ L+ D T +I AC + + G HG A + L D
Sbjct: 349 QDG-QTDKAFITCRKMLESGLRFDCVTLASIIMACMTSSSMEMGRVAHGYAVRNNLESDK 407
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
V+ LI +Y E LF+VM R++V +I +++ G SC++ ++L +M
Sbjct: 408 AVACGLIELYMSSEKTEHARGLFDVMSGRDMVMCKVMISAYADRGMSCQALEVLYQMQ-- 465
Query: 296 EEGFIP 301
EG P
Sbjct: 466 HEGISP 471
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 160 KTR-NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
KTR NL W+ L+SG ++N ++ +V+++ ++ + E P F + A A V +
Sbjct: 503 KTRPNLRTWSLLISGLSRNGMHCEVMNLCCKMH-EVEPAPSPTIFSAALVAMKAAASVQY 561
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYG 246
G +H K GL+ V +L+ MYG
Sbjct: 562 GKAMHACIVKKGLLLSKSVIQSLLNMYG 589
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L G D+ IGK++H + S D + N LI MYS CG ++ F +
Sbjct: 341 ATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNA-LIDMYSKCGMLDAAKSNFSNRS 399
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
++ W AL++G+ +N + + L +F ++ L+PD TF +IKA +A +G G
Sbjct: 400 EKSAISWTALITGYVQNGQHEEALQLFSDMRR-AGLRPDRATFSSIIKASSSLAMIGLGR 458
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H + G VF + L+ MY KC ++E ++ F+ MPERN +SWN++I ++ G
Sbjct: 459 QLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYG 518
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + + M+ C GF PD +T ++VL
Sbjct: 519 EAKNAIKMFEGMLHC--GFNPDSVTFLSVL 546
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
+G +VH LV ST N F+ N L+ YS C D RR+FD + R+ +N +++ +
Sbjct: 254 LGHQVHALVLRSTSVLNVFV-NNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAY 312
Query: 175 TKNELYTDVLSIFVELSS---DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
N+ VL +F E+ D ++ P + ++ G + DV G +H +GL
Sbjct: 313 AWNQCAATVLRLFREMQKLGFDRQVLP----YATMLSVAGSLPDVHIGKQIHAQLVLLGL 368
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
+ + NALI MY KC ++ F E++ +SW ++I G+ +NG E+ L
Sbjct: 369 ASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSD 428
Query: 292 MMGCEEGFIPDVITVVTVL 310
M G PD T +++
Sbjct: 429 MR--RAGLRPDRATFSSII 445
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 94/178 (52%), Gaps = 4/178 (2%)
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
F+ NT L+ Y G +RRVF + ++ +NA++ G +K L+T L +F +
Sbjct: 171 FVCNT-LLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRR 229
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ +FTF ++ G+A + G VH + + + +VFV+N+L+ Y KC ++
Sbjct: 230 -AGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLD 288
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+M +LF+ MPER+ VS+N II ++ N + L +M + GF V+ T+L
Sbjct: 289 DMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQ--KLGFDRQVLPYATML 344
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 7/162 (4%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
N F +N +++ YS G ++ +F S RN W ++ +D LS+F +
Sbjct: 73 NIFSLNL-ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM 131
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
+ + PD T V+ G +H A K GL VFV N L+ Y K
Sbjct: 132 LGEGVI-PDRVTVTTVLNLPGCTV-----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGL 185
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ ++F M +++ V++N+++ G S+ G ++ L M
Sbjct: 186 LAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAM 227
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
++F N +++ Y + LF P RN +W ++ + G + ++ L M+
Sbjct: 73 NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 132
Query: 294 GCEEGFIPDVITVVTVL 310
G EG IPD +TV TVL
Sbjct: 133 G--EGVIPDRVTVTTVL 147
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 108/192 (56%), Gaps = 3/192 (1%)
Query: 119 VHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNE 178
+H V S +S+ FI RL++MY G+ D++R+FD + ++L WN+L+SG +
Sbjct: 141 IHARVIKSLNYSDGFI-GDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRG 199
Query: 179 LYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVS 238
L+ F + +++ +P+ T V+ AC + + G +HG+ K+G+ G V
Sbjct: 200 YLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVV 259
Query: 239 NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEG 298
N+LI MYGK F++ +LFE MP R+LVSWNS++ + NG++ + DL M G
Sbjct: 260 NSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMK--RAG 317
Query: 299 FIPDVITVVTVL 310
PD T+V +L
Sbjct: 318 INPDQATMVALL 329
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC ++ GK +H +V ++N+ LI MY GF + ++F+ + R
Sbjct: 227 VVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNS-LINMYGKLGFLDAASQLFEEMPVR 285
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG--- 219
+L WN++V N + +F L + PD T +++AC D G G
Sbjct: 286 SLVSWNSMVVIHNHNGYAEKGMDLF-NLMKRAGINPDQATMVALLRAC---TDTGLGRQA 341
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H + G D+ ++ AL+ +Y K + +FE + +R+ ++W +++ G++ +
Sbjct: 342 ESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVH 401
Query: 280 GFSCES---FDLLIKMMGCEEGFIPDVITVVTVL 310
E+ FDL++K EG D +T +L
Sbjct: 402 ACGREAIKLFDLMVK-----EGVEVDHVTFTHLL 430
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
V + S +H K D F+ + L++MY K + E+ +LF+ MP ++LVSWNS++ G
Sbjct: 135 VSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSG 194
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S G+ + +M E G P+ +T+++V+
Sbjct: 195 LSGRGYLGACLNAFCRMR-TESGRQPNEVTLLSVV 228
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 106/180 (58%), Gaps = 2/180 (1%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+++G +H V S F++ ++ N LI MY+ CG D+ RVF+S+ R+ WN L+S
Sbjct: 264 VKLGMGIHGAVLKSNHFADVYVANA-LIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLS 322
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G +NELY+D L+ F ++ + + KPD + +I A G ++ G VH A + GL
Sbjct: 323 GLVQNELYSDALNYFRDMQNSGQ-KPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLD 381
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
++ + N L+ MY KC V+ M FE M E++L+SW +II G+++N F E+ +L K+
Sbjct: 382 SNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKV 441
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 113/217 (52%), Gaps = 8/217 (3%)
Query: 96 LKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV 155
L+ A +LL C K + G+++H L+ S + + T+L+ MY CG D+ +V
Sbjct: 45 LEHAHSLLLDLCVAAKALPQGQQLHALLLKSHLSA---FLATKLVLMYGKCGSLRDAVKV 101
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
FD + R +F WNAL+ F + Y + + ++ ++ + D TFP V+KACG + +
Sbjct: 102 FDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRV-LGVAIDACTFPSVLKACGALGE 160
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE--VMPERNLVSWNSII 273
G+ +HG+A K G VFV NALIAMYGKC + LF+ +M + + VSWNSII
Sbjct: 161 SRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSII 220
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ L +M E G + T V L
Sbjct: 221 SAHVAEGNCLEALSLFRRMQ--EVGVASNTYTFVAAL 255
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS--LK 160
+L+ACG + +G +H V+ + + LI MY CG +R +FD ++
Sbjct: 151 VLKACGALGESRLGAEIHG-VAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMME 209
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ WN+++S + LS+F + + + + +TF ++ + V G
Sbjct: 210 KEDTVSWNSIISAHVAEGNCLEALSLFRRMQ-EVGVASNTYTFVAALQGVEDPSFVKLGM 268
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
G+HG K DV+V+NALIAMY KC +E+ ++FE M R+ VSWN+++ G +N
Sbjct: 269 GIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNE 328
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ + M G PD ++V+ ++
Sbjct: 329 LYSDALNYFRDMQ--NSGQKPDQVSVLNLI 356
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 102/210 (48%), Gaps = 5/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L+AC K + +H V D ++ ++ +Y G +RR F+S++
Sbjct: 454 GSVLRACSGLKSRNFIREIHGYVFKRDL--ADIMLQNAIVNVYGEVGHIDYARRAFESIR 511
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
++++ W ++++ N L + L +F L T ++PD+ + A ++ + G
Sbjct: 512 SKDIVSWTSMITCCVHNGLPVEALELFYSLKQ-TNIQPDSIAIISALSATANLSSLKKGK 570
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG + G + ++++L+ MY C VE K+F + +R+L+ W S+I +G
Sbjct: 571 EIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHG 630
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L KM ++ IPD IT + +L
Sbjct: 631 CGNKAIALFKKMT--DQNVIPDHITFLALL 658
>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
Length = 899
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 111/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ C +K GK VH+ + +S N +I N LI MY+ CG D+ VF+ L
Sbjct: 32 LLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQN-HLIFMYAKCGCLEDALEVFELLPNP 90
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+F W AL++ + K +VL +F ++ D KPD F F V+ AC + G +
Sbjct: 91 NVFSWTALITAYAKEGHLREVLGLFRKMQLDG-TKPDAFVFSTVLTACSSAGALNEGKAI 149
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A G+ V V NA++ +YGKC V E +FE +PERNLVSWN++I ++NG
Sbjct: 150 HDCAVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGH- 207
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
C+ + +M + P+ T V+V+
Sbjct: 208 CKDAMQVFHLMDLDGSVRPNDATFVSVV 235
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 109/211 (51%), Gaps = 13/211 (6%)
Query: 103 LLQACGHEKDIEIGKRVHE---LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
+L AC + GK +H+ L TQ + I+N +Y CG +++ VF+ L
Sbjct: 133 VLTACSSAGALNEGKAIHDCAVLAGMETQVVGNAIVN-----LYGKCGRVHEAKAVFERL 187
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
RNL WNAL++ +N D + +F + D ++P++ TF V+ AC + D+ G
Sbjct: 188 PERNLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRG 247
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
H + G +FV N+L+ MYGKC V+ +FE M RN+VSW +I +++
Sbjct: 248 KSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQ 307
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
GF +FDL K M CE P+ +T + V+
Sbjct: 308 GFIRAAFDLY-KRMDCE----PNAVTFMAVM 333
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 118/213 (55%), Gaps = 11/213 (5%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++ +C +D+ +++H + AS F +D ++ L+TMY CG + +F++LK
Sbjct: 331 AVMDSCLRPEDLPRAEQIHAHMVASG-FDSDAVLQVCLVTMYGKCGSVDSAWSIFENLKE 389
Query: 162 R--NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
R N WNA++SG ++ L F ++ + ++P++ T+ ++AC + D+ G
Sbjct: 390 RSNNAVTWNAMISGLAQHGESKQALECFWKMELEG-VRPNSVTYLASLEACSSLNDLTRG 448
Query: 220 SGVHGMAAKMGL--IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
+H A++ L I + +SNA+I MYGKC ++E + F MPER++VSWN++I ++
Sbjct: 449 RQLH---ARILLENIHEANLSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYA 505
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++G ++ + +M EG+ D T + +
Sbjct: 506 QHGSGRQALEFFKQMD--LEGWTTDRATYLGAI 536
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC + D+ GK HE + T F + + L+ MY CG +R VF+ + +R
Sbjct: 234 VVDACSNLLDLPRGKSTHERI-IRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSR 292
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W ++ + + ++ + + +P+ TF V+ +C D+ +
Sbjct: 293 NVVSWTVMIWAYAQQGFIRAAFDLYKRM----DCEPNAVTFMAVMDSCLRPEDLPRAEQI 348
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER--NLVSWNSIICGFSENG 280
H G D + L+ MYGKC V+ +FE + ER N V+WN++I G +++G
Sbjct: 349 HAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHG 408
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S ++ + KM EG P+ +T + L
Sbjct: 409 ESKQALECFWKME--LEGVRPNSVTYLASL 436
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 9/210 (4%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+AC D+ G+++H + + ++ +I MY CG ++ F + R+
Sbjct: 436 LEACSSLNDLTRGRQLHARILLENIHEAN--LSNAVINMYGKCGSLDEAMDEFAKMPERD 493
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTE-LKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN +++ + ++ L F ++ D E D T+ I ACG + + G +
Sbjct: 494 VVSWNTMIATYAQHGSGRQALEFFKQM--DLEGWTTDRATYLGAIDACGSVPSLALGKTI 551
Query: 223 HGMAAKMG--LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H + A L D V+ AL+ MY +C + + +F RNLV+W+++I +++G
Sbjct: 552 HSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHG 611
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL +M +G PD +T T++
Sbjct: 612 RENEALDLFREMQ--LQGTKPDALTFSTLV 639
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVS-ASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ ACG + +GK +H +V+ A+ D + T L+TMY+ CG D++ VF +R
Sbjct: 536 IDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSR 595
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
NL W+ L++ ++ + L +F E+ KPD TF ++ AC
Sbjct: 596 NLVTWSNLIAACAQHGRENEALDLFREMQLQG-TKPDALTFSTLVAAC 642
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
S L+P + +++ C G VH G + ++ N LI MY KC +
Sbjct: 20 SSESLQPARYA--SLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCL 77
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +++FE++P N+ SW ++I +++ G E L KM +G PD TVL
Sbjct: 78 EDALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQ--LDGTKPDAFVFSTVL 134
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 141/266 (53%), Gaps = 17/266 (6%)
Query: 45 KEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLL 104
KE+ S+S + GL E+++++ + QE + A + G +L
Sbjct: 231 KERDSISWTTMITGLIQNGL-----------EAEAMDLFRDMRQEGM--AMDQYTFGSVL 277
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNL 164
ACG + ++ GK +H L+ S ++++ + + L+ MY C + VF + +N+
Sbjct: 278 TACGGLRALKEGKEIHTLIIRSG-YNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNV 336
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
W A++ G+ +N + + +F ++ + ++PD+FT VI +C +A + G+ H
Sbjct: 337 VSWTAMLVGYGQNGFSEEAVRVFCDMQRNG-IEPDDFTLGSVISSCANLASLEEGAQFHC 395
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCE 284
A GLI + VSNALI +YGKC +E+ +LF+ M R+ VSW +++ G+++ G + E
Sbjct: 396 QALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANE 455
Query: 285 SFDLLIKMMGCEEGFIPDVITVVTVL 310
+ DL +M+ +G PD +T + VL
Sbjct: 456 TIDLFERML--VQGLKPDAVTFIAVL 479
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 85/211 (40%), Gaps = 34/211 (16%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
N F NT +++ YS G + +F + R+ WN+L+SG+ + + + +
Sbjct: 70 NSFSWNT-MLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSM 128
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK--- 247
D L + TF ++ V G +HG K G VFV ++L+ MY K
Sbjct: 129 MKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGL 188
Query: 248 ----------------------------CAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
V++ +LF M ER+ +SW ++I G +N
Sbjct: 189 VSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQN 248
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ DL M +EG D T +VL
Sbjct: 249 GLEAEAMDLFRDMR--QEGMAMDQYTFGSVL 277
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 8/177 (4%)
Query: 101 GVLLQACGHEKDIEIGKRVH--ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
G ++ +C + +E G + H LVS F ++ LIT+Y CG DS ++FD
Sbjct: 375 GSVISSCANLASLEEGAQFHCQALVSGLISF---ITVSNALITLYGKCGSIEDSNQLFDE 431
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ R+ W ALVSG+ + + + +F + LKPD TF V+ AC V
Sbjct: 432 MSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQG-LKPDAVTFIAVLSACSRAGLVER 490
Query: 219 GSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
G M G+I +I ++G+ +EE MP + + W +++
Sbjct: 491 GQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLL 547
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
P+ F + +I A + ++ + V + + F N +++ Y K + M ++
Sbjct: 38 PETFLYNNLINAYSKLGNITYARHVFDKMPQ----PNSFSWNTMLSAYSKSGDLSTMQEI 93
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
F +MP R+ VSWNS+I G+ G E+ MM
Sbjct: 94 FSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMM 129
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 116/210 (55%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L ACG ++ GK++H + T + ++ + + L+ MY C + VF ++
Sbjct: 274 GSVLTACGGFLALDEGKQIHAYI-IRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMR 332
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+N+ W A++ G+ +N + + IF ++ + E+ PD+FT VI +C +A + G+
Sbjct: 333 HKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRN-EIHPDDFTLGSVISSCANLASLEEGA 391
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
HG A GLI V VSNALI +YGKC +E +LF M R+ VSW +++ G+++ G
Sbjct: 392 QFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFG 451
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ L M+ G +PD +T V VL
Sbjct: 452 KANETISLFETMLA--HGIVPDGVTFVGVL 479
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 95/179 (53%), Gaps = 3/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ ++ +IT C F +++ ++FD++ ++ W +++G T+N L+ + + F E+
Sbjct: 203 NIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMG 262
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ D FTF V+ ACGG + G +H + ++FV +AL+ MY KC V
Sbjct: 263 IEG-FCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNV 321
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +F M +N++SW +++ G+ +NG+S E+ + M E PD T+ +V+
Sbjct: 322 KYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNE--IHPDDFTLGSVI 378
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 108/239 (45%), Gaps = 38/239 (15%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ G D++ + V + + FS NT L++ YS G+ D +RVFDS+
Sbjct: 46 LINTYGKLGDLKNARNVFDHIPQPNLFS----WNT-LLSAYSKLGYLQDMQRVFDSMPNH 100
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+L+SG+ N L ++ + ++ + D + + TF ++ V G +
Sbjct: 101 DVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQI 160
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGK-------------------------------CAFV 251
HG K G +FV + L+ MY K C F+
Sbjct: 161 HGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFI 220
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E +LF+ MPE++ +SW +II G ++NG E+ D K MG EGF D T +VL
Sbjct: 221 VEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKF-KEMGI-EGFCMDQFTFGSVL 277
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 30/48 (62%)
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+ F+ N LI YGK ++ +F+ +P+ NL SWN+++ +S+ G+
Sbjct: 39 ETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKLGY 86
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 116/197 (58%), Gaps = 6/197 (3%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
+ KR+H L+ S + ++FI + RL+ +Y+ G SR FD ++ ++++ WN+++S +
Sbjct: 91 LAKRLHALLVVSGKIQSNFI-SIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAY 149
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
+N + + + F +L T+ + D +TFP V+KAC + D G +H K+G D
Sbjct: 150 VRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWVFKLGFQWD 206
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
VFV+ +LI MY + FV LF+ MP R++ SWN++I G +NG + ++ D+L +M
Sbjct: 207 VFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMR- 265
Query: 295 CEEGFIPDVITVVTVLP 311
EG D +TV ++LP
Sbjct: 266 -LEGINMDSVTVASILP 281
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 7/207 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC D G+++H V F D + LI MYS GF +R +FD + R
Sbjct: 181 VLKACQTLVD---GRKIHCWV-FKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFR 236
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA++SG +N L + E+ + + D+ T ++ C + D+ + +
Sbjct: 237 DMGSWNAMISGLIQNGNAAQALDVLDEMRLEG-INMDSVTVASILPVCAQLGDISTATLI 295
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K GL ++FVSNALI MY K + + K+F+ M R++VSWNSII + +N
Sbjct: 296 HLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDP 355
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTV 309
+ KM G PD++T+V++
Sbjct: 356 VTARGFFFKMQ--LNGLEPDLLTLVSL 380
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 2/208 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L +D + + VH + +I ++ MY+ G + +VF+ + +
Sbjct: 380 LASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVK 439
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN L+SG+T+N L ++ + ++ + E+K + T+ ++ A + + G +
Sbjct: 440 DVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRI 499
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K L DVFV LI +YGKC + + + LF +P + V WN+II +G
Sbjct: 500 HGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHG 559
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M +EG PD +T +++L
Sbjct: 560 EKALKLFREMQ--DEGVKPDHVTFISLL 585
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 3/177 (1%)
Query: 87 LQENLHNADLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSL 145
+ E L + T V +L A H ++ G R+H + T D + T LI +Y
Sbjct: 466 MMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHL-IKTNLHLDVFVGTCLIDLYGK 524
Query: 146 CGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPC 205
CG +D+ +F + + WNA++S + L +F E+ D +KPD+ TF
Sbjct: 525 CGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQ-DEGVKPDHVTFIS 583
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
++ AC V G + + G+ + ++ + G+ F+E + MP
Sbjct: 584 LLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMP 640
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 117/208 (56%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC KD+ IGK+VH +V S F D + L+ MY+ C LDS+R+FD + R
Sbjct: 163 VLKACSIVKDLRIGKQVHGVVVVSG-FEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPER 221
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WNAL S + + + + + +F E+ + +KP+ F+ ++ AC G+ D G +
Sbjct: 222 NVVSWNALFSCYVQIDFCGEAVGLFYEMVL-SGIKPNEFSLSSMVNACTGLRDSSRGKII 280
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K+G D F +NAL+ MY K + + + +FE + + ++VSWN++I G +
Sbjct: 281 HGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHH 340
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +LL +M G P++ T+ + L
Sbjct: 341 EQALELLGQMK--RSGICPNIFTLSSAL 366
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 103/191 (53%), Gaps = 2/191 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL C K + G ++H ++ S S+D I LI +YS C +R++ D
Sbjct: 62 LLSQCCTTKSLRPGLQIHAHITKSG-LSDDPSIRNHLINLYSKCRNFGYARKLVDESSEP 120
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L W+AL+SG+ +N L L F E+ +K + FTF V+KAC + D+ G V
Sbjct: 121 DLVSWSALISGYAQNGLGGGALMAFHEMHL-LGVKCNEFTFSSVLKACSIVKDLRIGKQV 179
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ G GDVFV+N L+ MY KC + +LF+ +PERN+VSWN++ + + F
Sbjct: 180 HGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFC 239
Query: 283 CESFDLLIKMM 293
E+ L +M+
Sbjct: 240 GEAVGLFYEMV 250
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 108/198 (54%), Gaps = 4/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+ + ++VH L S + F +D + LI Y C D+ R+F+ +L + ++++
Sbjct: 476 VHVCRQVHGL-SVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMIT 534
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
+ + + L +F+E+ D ELKPD F ++ AC ++ G +H K G +
Sbjct: 535 AYAQYGQGEEALKLFLEMQ-DMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFV 593
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
D+F N+L+ MY KC +++ + F + ER +VSW+++I G +++G ++ L +M
Sbjct: 594 LDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQM 653
Query: 293 MGCEEGFIPDVITVVTVL 310
+ +EG P+ IT+V+VL
Sbjct: 654 L--KEGVSPNHITLVSVL 669
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 109/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC +D GK +H + + F N L+ MY+ G D+ VF+ +K
Sbjct: 264 MVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANA-LVDMYAKVGDLADAISVFEKIKQP 322
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA+++G +E + L + ++ + + P+ FT +KAC G+ G +
Sbjct: 323 DIVSWNAVIAGCVLHEHHEQALELLGQMKR-SGICPNIFTLSSALKACAGMGLKELGRQL 381
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H KM + D+FVS L+ MY KC +E+ F ++PE++L++WN+II G+S+
Sbjct: 382 HSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWED 441
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L ++M +EG + T+ T+L
Sbjct: 442 MEALSLFVEMH--KEGIGFNQTTLSTIL 467
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%)
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
P + ++ ++ C + G +H K GL D + N LI +Y KC KL
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKL 113
Query: 258 FEVMPERNLVSWNSIICGFSENGF 281
+ E +LVSW+++I G+++NG
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGL 137
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 133/262 (50%), Gaps = 7/262 (2%)
Query: 49 SLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACG 108
S +LS T+N T + +I CE L A+ LL + + +LQ C
Sbjct: 12 SATLSETTHNNVTVDKN--AKICKFCEMG-DLRNAMKLLSRSQRSELELNTYCSVLQLCA 68
Query: 109 HEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWN 168
K +E GKRVH ++S S + D ++ +L+ MY CG + RR+FD + +F WN
Sbjct: 69 ELKSLEDGKRVHSIIS-SNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWN 127
Query: 169 ALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK 228
L+S + K Y + + +F E + ++ D++TF CV+K A V VHG K
Sbjct: 128 LLMSEYAKIGNYRESVGLF-EKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLK 186
Query: 229 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
+G V N+LIA Y KC VE LF+ + +R++VSWNS+I G + NGFS +
Sbjct: 187 LGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEF 246
Query: 289 LIKMMGCEEGFIPDVITVVTVL 310
I+M+ G D T+V VL
Sbjct: 247 FIQMLNL--GVDVDSATLVNVL 266
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 122/231 (52%), Gaps = 16/231 (6%)
Query: 62 QGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHE 121
+GLH+ E L +E +S K L D+ T V+ AC ++ G+ VH
Sbjct: 338 EGLHY--EAIGLFDEMQS--KGL--------RPDIYAVTSVV-HACACSNSLDKGREVHN 384
Query: 122 LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYT 181
+ + SN ++ L+ MY+ CG ++ +F L +N+ WN ++ G+++N L
Sbjct: 385 HIKKNNMGSN-LPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPN 443
Query: 182 DVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNAL 241
+ L +F+++ +LKPD+ T CV+ AC G+A + G +HG + G D+ V+ AL
Sbjct: 444 EALQLFLDMQK--QLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACAL 501
Query: 242 IAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ MY KC + +LF+++P+++++ W +I G+ +GF E+ KM
Sbjct: 502 VDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKM 552
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 112/218 (51%), Gaps = 6/218 (2%)
Query: 95 DLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSR 153
D+ AT V +L AC + ++ +G+ +H FS + N L+ MYS CG +
Sbjct: 256 DVDSATLVNVLVACANVGNLTLGRALHAY-GVKAGFSGGVMFNNTLLDMYSKCGNLNGAN 314
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
VF + + W ++++ + L+ + + +F E+ S L+PD + V+ AC
Sbjct: 315 EVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKG-LRPDIYAVTSVVHACACS 373
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
+ G VH K + ++ VSNAL+ MY KC +EE +F +P +N+VSWN++I
Sbjct: 374 NSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMI 433
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G+S+N E+ L + M ++ PD +T+ VLP
Sbjct: 434 GGYSQNSLPNEALQLFLDM---QKQLKPDDVTMACVLP 468
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 126/238 (52%), Gaps = 8/238 (3%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVL---LQACGHEKDIEIGKRVHELVSASTQFSND 132
+S +KAL L +H A + + L L AC +E GK+VH + F +
Sbjct: 290 QSGDSHKALKLFSR-MHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYL-LKLGFESQ 347
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
I T L+ MY+ G D+R+ F+ L+ +L W ++++G+ +N D LS++ +
Sbjct: 348 LYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQM 407
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ L P+ T V+KAC +A G +H K GL +V + +AL MY KC +E
Sbjct: 408 EGIL-PNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLE 466
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E +F MPER+++SWN++I G S+NG+ E+ +L +M ++ PD +T V VL
Sbjct: 467 EGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMR--QQDTKPDDVTFVNVL 522
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 100/191 (52%), Gaps = 3/191 (1%)
Query: 109 HEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWN 168
H+K ++ G+ +H + S+ + LI Y+ C ++ VFD + +++ WN
Sbjct: 19 HQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWN 78
Query: 169 ALVSGFTKNELYTD--VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
L++G+++ V+ +F + +D L P+ TF + A ++ + FG H +A
Sbjct: 79 CLINGYSQQGPTGSSFVMELFQRMRADNIL-PNAHTFSGIFTAASNLSSIFFGQQAHAVA 137
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
KM DVFV ++L+ MY K + E ++F+ MPERN V+W ++I G++ + E+F
Sbjct: 138 IKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAF 197
Query: 287 DLLIKMMGCEE 297
++ M EE
Sbjct: 198 EVFELMRREEE 208
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ A + I G++ H + F D + + L+ MY G ++R VFD + R
Sbjct: 117 IFTAASNLSSIFFGQQAHAVAIKMACFY-DVFVGSSLLNMYCKAGLLFEAREVFDRMPER 175
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N W ++SG+ L + +F EL E + F F V+ A V G +
Sbjct: 176 NEVTWATMISGYAIQRLAGEAFEVF-ELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQI 234
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A K GL+ + + NAL+ MY KC +++ +++FE+ ++N ++W+++I G++++G S
Sbjct: 235 HCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDS 294
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M G P T+V VL
Sbjct: 295 HKALKLFSRMHFA--GINPSEFTLVGVL 320
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC + + G+++H + + I + L TMY+ CG + VF + R
Sbjct: 420 VLKACSNLAAFDQGRQIHAR-TIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPER 478
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGF 218
++ WNA++SG ++N + L +F E+ + KPD+ TF V+ AC G+ D G+
Sbjct: 479 DIISWNAMISGLSQNGYGKEALELFEEMRQQ-DTKPDDVTFVNVLSACSHMGLVDSGW 535
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 117/205 (57%), Gaps = 6/205 (2%)
Query: 107 CGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
C H KD+ +G +VH + ++ D +++ +I MY CG L++R+VF+ L+T+N+
Sbjct: 240 CSHLKDLRLGLQVHCRMFRTGAEY--DSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVV 297
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
W A+++ +++N + + L+ F E+ D L P+ +TF ++ +C GI+ +G G +H
Sbjct: 298 SWTAILAAYSQNGCFEEALNFFPEMEVDG-LLPNEYTFAVLLNSCAGISALGHGKLLHTR 356
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
K G + V NALI MY K +E K+F M R+ ++W+++ICG S +G E+
Sbjct: 357 IKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREA 416
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
+ +M+ +E P +T V VL
Sbjct: 417 LVVFQEMLAAKE--CPHYVTFVGVL 439
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 117/212 (55%), Gaps = 3/212 (1%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR-LITMYSLCGFPLDSRRVF 156
E T LL+ K+++ GK +H + + Q + D I+ LI +Y+ C + +R +F
Sbjct: 26 EHTIQLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILF 85
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
D ++ RN+ W AL++G+ N L +VL +F + S ++P+ + F +I +C V
Sbjct: 86 DGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQV 145
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G HG A K GL+ +V NALI MY + + V+ + ++ +P ++ S+N II G
Sbjct: 146 VEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGL 205
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
ENG+ E+ ++L +M+ +E + D +T VT
Sbjct: 206 LENGYPSEALEVLDRMV--DECIVWDNVTYVT 235
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ +C + G + H S + ++ N LI MYS + V+ +
Sbjct: 135 IISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNA-LICMYSRRSDVKGAMSVWYEVPGL 193
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++F +N +++G +N ++ L + + D + DN T+ C + D+ G V
Sbjct: 194 DVFSYNIIINGLLENGYPSEALEVLDRMV-DECIVWDNVTYVTAFGLCSHLKDLRLGLQV 252
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G D FVS+A+I MYGKC + K+F + +N+VSW +I+ +S+NG
Sbjct: 253 HCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCF 312
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + +M +G +P+ T +L
Sbjct: 313 EEALNFFPEME--VDGLLPNEYTFAVLL 338
>gi|224127716|ref|XP_002320145.1| predicted protein [Populus trichocarpa]
gi|222860918|gb|EEE98460.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+AC D+EIG+ +H + F+ + +N+ L+ +Y CG ++RR FD + R
Sbjct: 101 LLRACLELNDVEIGRELHCFI-VKLGFAVNSFVNSALVDLYGKCGLVKEARRAFDEVYCR 159
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN ++S + N L + S F +L + D FTF ++ +CG + G +
Sbjct: 160 DLVLWNVMLSCYAMNCLAEEA-SGFFKLMQEENFMTDGFTFSSMLNSCGTLGSCNLGRQI 218
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG++ K+ DV V++ L+ MY K +++ K F+ M RN+VSWN+++ G+ G
Sbjct: 219 HGLSIKLSFDLDVLVASGLVDMYAKSENIDDARKAFDGMAARNVVSWNTMVVGYGRLGDG 278
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ LLI M +E PD IT+ +++
Sbjct: 279 GEAMKLLIGMF--QEDLRPDEITLASII 304
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +CG +G+++H L S F D ++ + L+ MY+ D+R+ FD + R
Sbjct: 202 MLNSCGTLGSCNLGRQIHGL-SIKLSFDLDVLVASGLVDMYAKSENIDDARKAFDGMAAR 260
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN +V G+ + + + + + + + +L+PD T +I++C V
Sbjct: 261 NVVSWNTMVVGYGRLGDGGEAMKLLIGMFQE-DLRPDEITLASIIRSCSSALTSCEIMQV 319
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ K G + ++NALI Y K + ++ F + E +LV+W S+I ++ +
Sbjct: 320 NAYVLKNGFHAFLSIANALINAYSKGGSIAMALQCFNTVLEPDLVTWTSLIGAYAFHSLP 379
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
S D +M+ +G PD I + VL
Sbjct: 380 KNSIDTFEEMLA--DGVWPDQIVFLEVL 405
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 8/200 (4%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK+VH V F N + +++ +Y C + R+FD + RN+ WN ++ G
Sbjct: 7 GKQVHSHV-IKLGFCNVLSLQNQILNVYIKCKDFNYAHRLFDEMHVRNVVTWNTVICGLV 65
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCV-----IKACGGIADVGFGSGVHGMAAKMG 230
S+++ ++ D F + ++AC + DV G +H K+G
Sbjct: 66 DCRGSDYESSVYMGFCYFRKMLLDKVGFDAITLNGLLRACLELNDVEIGRELHCFIVKLG 125
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
+ FV++AL+ +YGKC V+E + F+ + R+LV WN ++ ++ N + E+
Sbjct: 126 FAVNSFVNSALVDLYGKCGLVKEARRAFDEVYCRDLVLWNVMLSCYAMNCLAEEASGFFK 185
Query: 291 KMMGCEEGFIPDVITVVTVL 310
M EE F+ D T ++L
Sbjct: 186 LMQ--EENFMTDGFTFSSML 203
>gi|148906116|gb|ABR16216.1| unknown [Picea sitchensis]
Length = 394
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 114/209 (54%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L AC + GK ++ E++S + D I+ LI M+ CG D+RRVFD +
Sbjct: 119 VLNACARLASLSEGKLIYDEIISKGCEM--DVIVENALINMFMKCGSIEDARRVFDKMCE 176
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
RNL W A+VSG+ + + L +F E+ + ++K + T V+ AC ++D+ G
Sbjct: 177 RNLVSWTAMVSGYAQGGFADEALRMFYEMQGE-DVKANYVTVASVLPACAQLSDLQQGKE 235
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG + GL + V NALI MY KC + K+F+ M +R++VSWN I G+++NG
Sbjct: 236 IHGYIIRRGLDLGIVVGNALIDMYAKCGSIGSAQKVFDKMLQRDVVSWNVAIAGYAQNGR 295
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E +L KM C G DVIT T++
Sbjct: 296 FDECMELFRKMQ-C-AGLKIDVITWNTLI 322
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 118/214 (55%), Gaps = 7/214 (3%)
Query: 100 TGVLLQACGHEKDIEIGKRVHE--LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
+ +LL C K + K+VH L++ + + + T+L+ +Y CG D+R FD
Sbjct: 14 SSLLLHLCTKAKTLAEAKQVHAHMLLTGILRIPS---VETKLLNLYVKCGSLPDARLAFD 70
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
++ ++F WN ++ G+ K+ + L ++ ++ + PDN+T+ V+ AC +A +
Sbjct: 71 NMTKGDVFPWNVMIGGYVKHGETREALELYHQMQKVSSTNPDNYTYSSVLNACARLASLS 130
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G ++ G DV V NALI M+ KC +E+ ++F+ M ERNLVSW +++ G++
Sbjct: 131 EGKLIYDEIISKGCEMDVIVENALINMFMKCGSIEDARRVFDKMCERNLVSWTAMVSGYA 190
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ GF+ E+ + +M G E + +TV +VLP
Sbjct: 191 QGGFADEALRMFYEMQG--EDVKANYVTVASVLP 222
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 84/201 (41%), Gaps = 39/201 (19%)
Query: 81 NKALSLLQENLHNADLKE---ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
++AL + E + D+K +L AC D++ GK +H + ++
Sbjct: 196 DEALRMFYE-MQGEDVKANYVTVASVLPACAQLSDLQQGKEIHGYI-IRRGLDLGIVVGN 253
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF---------- 187
LI MY+ CG +++VFD + R++ WN ++G+ +N + + + +F
Sbjct: 254 ALIDMYAKCGSIGSAQKVFDKMLQRDVVSWNVAIAGYAQNGRFDECMELFRKMQCAGLKI 313
Query: 188 ---------------------VELSSDTEL---KPDNFTFPCVIKACGGIADVGFGSGVH 223
+EL +L KP++ T V+ AC ++ + G +H
Sbjct: 314 DVITWNTLITAYAQNGYGDQTLELFQQMQLRGVKPNSITIASVLSACAAVSALQEGKRIH 373
Query: 224 GMAAKMGLIGDVFVSNALIAM 244
+ + D+ V NALI M
Sbjct: 374 DLVNRSECKSDICVGNALIDM 394
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 108/192 (56%), Gaps = 3/192 (1%)
Query: 119 VHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNE 178
+H V S +S+ FI RL++MY G+ D++R+FD + ++L WN+L+SG +
Sbjct: 84 IHARVIKSLNYSDGFI-GDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRG 142
Query: 179 LYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVS 238
L+ F + +++ +P+ T V+ AC + + G +HG+ K+G+ G V
Sbjct: 143 YLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVV 202
Query: 239 NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEG 298
N+LI MYGK F++ +LFE MP R+LVSWNS++ + NG++ + DL M G
Sbjct: 203 NSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMK--RAG 260
Query: 299 FIPDVITVVTVL 310
PD T+V +L
Sbjct: 261 INPDQATMVALL 272
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC ++ GK +H +V ++N+ LI MY GF + ++F+ + R
Sbjct: 170 VVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNS-LINMYGKLGFLDAASQLFEEMPVR 228
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG--- 219
+L WN++V N + +F L + PD T +++AC D G G
Sbjct: 229 SLVSWNSMVVIHNHNGYAEKGMDLF-NLMKRAGINPDQATMVALLRAC---TDTGLGRQA 284
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H + G D+ ++ AL+ +Y K + +FE + +R+ ++W +++ G++ +
Sbjct: 285 ESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVH 344
Query: 280 GFSCES---FDLLIKMMGCEEGFIPDVITVVTVL 310
E+ FDL++K EG D +T +L
Sbjct: 345 ACGREAIKLFDLMVK-----EGVEVDHVTFTHLL 373
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 31/166 (18%)
Query: 145 LCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFP 204
LC F + RR+ ++ NLFQ L F ++Y+ V S+ +SS T
Sbjct: 37 LCKFFISKRRICNA----NLFQ---LSPPF---QVYSIVQSLVFAISSCTS--------- 77
Query: 205 CVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
V + S +H K D F+ + L++MY K + E+ +LF+ MP +
Sbjct: 78 -----------VSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNK 126
Query: 265 NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+LVSWNS++ G S G+ + +M E G P+ +T+++V+
Sbjct: 127 DLVSWNSLMSGLSGRGYLGACLNAFCRMR-TESGRQPNEVTLLSVV 171
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 116/211 (54%), Gaps = 6/211 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG G VH +V AS N F+ N L++MY CG ++R+VFD ++ R
Sbjct: 151 VLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNG-LVSMYGRCGAWENARQVFDEMRER 209
Query: 163 ---NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+L WN++V+ + + + +F ++ D ++PD + V+ AC + G
Sbjct: 210 GVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRG 269
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
VHG A + GL DVFV NA++ MY KC +EE K+FE M +++VSWN+++ G+S+
Sbjct: 270 KQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQI 329
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G ++ L K+ EE +V+T V+
Sbjct: 330 GRFDDALGLFEKIR--EEKIELNVVTWSAVI 358
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLK--TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
T +I+MY P + V L + +F WN L+ DVL ++ +
Sbjct: 81 THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQR-L 139
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+PD++TFP V+KACG I G+ VH + G +VFV N L++MYG+C E
Sbjct: 140 GWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENA 199
Query: 255 VKLFEVMPER---NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++F+ M ER +LVSWNSI+ + + G S + + +M + G PD +++V VLP
Sbjct: 200 RQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTE-DLGIRPDAVSLVNVLP 258
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 6/184 (3%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSL--KTRNLFQWNALVSGFTKNELYTDVLSIFV 188
+D ++ LI MYS C P +R +FD + K R++ W L+ G ++ + L +F
Sbjct: 426 DDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFS 485
Query: 189 E-LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL-IGDVFVSNALIAMYG 246
+ L D + P+ FT C + AC + + FG +H + +FV+N LI MY
Sbjct: 486 QMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYS 545
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
K V+ +F+ M +RN VSW S++ G+ +G E+ + +M + +PD +T
Sbjct: 546 KSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQ--KVXLVPDGVTF 603
Query: 307 VTVL 310
V VL
Sbjct: 604 VVVL 607
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 4/161 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + G+++H V + S + LI MYS G +R VFD++ RN
Sbjct: 505 LMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRN 564
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGSG 221
W +L++G+ + + L IF E+ L PD TF V+ AC G+ D G
Sbjct: 565 GVSWTSLMTGYGMHGRGEEALQIFYEMQK-VXLVPDGVTFVVVLYACSHSGMVDQGINY- 622
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+GM G++ ++ + + ++E ++L MP
Sbjct: 623 FNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMP 663
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L ACG +E GK++H + T + ++ + + L+ MYS C + F +
Sbjct: 276 GSILTACGALSALEQGKQIHAYI-IRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMS 334
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+N+ W AL+ G+ +N + + +F E+ D + PD+FT VI +C +A + G+
Sbjct: 335 CKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDG-IDPDDFTLGSVISSCANLASLEEGA 393
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H +A GL+ + VSNAL+ +YGKC +E+ +LF+ M + VSW +++ G+++ G
Sbjct: 394 QFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFG 453
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ DL KM+ + PD +T + VL
Sbjct: 454 RAKETIDLFEKMLA--KDVKPDGVTFIGVL 481
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 4/180 (2%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
N + NT +IT C ++RR+F+ + R+ W +V+GFT+N L + L+ F +
Sbjct: 205 NVVMYNT-MITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRM 263
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
+ D +TF ++ ACG ++ + G +H + +VFV +AL+ MY KC
Sbjct: 264 RFQG-IAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRS 322
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ F M +N++SW ++I G+ +NG S E+ + +M +G PD T+ +V+
Sbjct: 323 IKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQ--RDGIDPDDFTLGSVI 380
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 87/217 (40%), Gaps = 63/217 (29%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE--------- 189
L+T Y G +RRVFD+ NLF +NAL+S L D+ S+F
Sbjct: 47 LLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSY 106
Query: 190 -----------------------LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH--- 223
L + + ++P T ++ A + D G H
Sbjct: 107 NAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQI 166
Query: 224 ----------------GMAAKMGLIGD------------VFVSNALIAMYGKCAFVEEMV 255
GM AKMGLIGD V + N +I +C VEE
Sbjct: 167 LRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEAR 226
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+LFEVM +R+ ++W +++ GF++NG ++ + +M
Sbjct: 227 RLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRM 263
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 84/177 (47%), Gaps = 8/177 (4%)
Query: 101 GVLLQACGHEKDIEIGKRVH--ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
G ++ +C + +E G + H LVS + ++ L+T+Y CG D+ R+FD
Sbjct: 377 GSVISSCANLASLEEGAQFHCLALVSGLMHY---ITVSNALVTLYGKCGSIEDAHRLFDE 433
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ + W ALV+G+ + + + +F ++ + ++KPD TF V+ AC V
Sbjct: 434 MLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLA-KDVKPDGVTFIGVLSACSRAGFVEK 492
Query: 219 G-SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
G S H M G++ +I +Y + ++E + + MP + + W +++
Sbjct: 493 GCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLL 549
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
++F NAL++ +++M LF M +R+ VS+N++I GFS G + L ++
Sbjct: 71 NLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLL 130
Query: 294 GCEEGFIPDVITV 306
P IT+
Sbjct: 131 RAGSSVRPSRITM 143
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 117/209 (55%), Gaps = 5/209 (2%)
Query: 103 LLQACGH-EKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+AC +G +H LV T F D + T L+ +YS GF D+R+VFD +
Sbjct: 107 VLKACTRLPHYFHVGLSLHSLV-IKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPE 165
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N+ W A++ G+ ++ + + L +F L + L+PD+FT ++ AC + D+ G
Sbjct: 166 KNVVSWTAIICGYIESGCFGEALGLFRGLL-EMGLRPDSFTLVRILYACSRVGDLASGRW 224
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+ G + G +G+VFV+ +L+ MY KC +EE ++F+ M E+++V W+++I G++ NG
Sbjct: 225 IDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGM 284
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ D+ +M E PD +V V
Sbjct: 285 PKEALDVFFEMQ--RENVRPDCYAMVGVF 311
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 86/157 (54%), Gaps = 4/157 (2%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VF N+F +N L+ G N+ + D +S++ + PDNFTFP V+KAC +
Sbjct: 57 VFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHG-FAPDNFTFPFVLKACTRLP 115
Query: 215 DV-GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
G +H + K G DVFV L+ +Y K F+ + K+F+ +PE+N+VSW +II
Sbjct: 116 HYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAII 175
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
CG+ E+G E+ L ++ E G PD T+V +L
Sbjct: 176 CGYIESGCFGEALGLFRGLL--EMGLRPDSFTLVRIL 210
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC D+ G+ + + S N F+ T L+ MY+ CG ++RRVFD + +
Sbjct: 209 ILYACSRVGDLASGRWIDGYMRESGSVGNVFVA-TSLVDMYAKCGSMEEARRVFDGMVEK 267
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+AL+ G+ N + + L +F E+ + ++PD + V AC + + G+
Sbjct: 268 DVVCWSALIQGYASNGMPKEALDVFFEMQREN-VRPDCYAMVGVFSACSRLGALELGNWA 326
Query: 223 HGMAAKMGLIGDVFVSN-----ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G+ + GD F+SN ALI Y KC V + ++F+ M ++ V +N++I G +
Sbjct: 327 RGL-----MDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLA 381
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G +F + +M+ + G PD T V +L
Sbjct: 382 MCGHVGAAFGVFGQMV--KVGMQPDGNTFVGLL 412
>gi|222624644|gb|EEE58776.1| hypothetical protein OsJ_10296 [Oryza sativa Japonica Group]
Length = 419
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 118/229 (51%), Gaps = 24/229 (10%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR- 162
L+AC H D+ G+ +H LV ++D + T L+ MYS CG +R+VFD + +R
Sbjct: 54 LRACAHLADVASGRLIHALVLTRPALASDAVAATALLDMYSKCGLVASARKVFDEMASRG 113
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELS---------------------SDTELKPDNF 201
+ WNAL++ + ++ L L++ V++ + + P +
Sbjct: 114 DPVVWNALLACYARHGLPEHALALAVKMRGIGLCPDLYGRARALFRAMMVAGGRVLPSSA 173
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
T ++ A +ADV G VHG + G+ ++ VS+AL+ MY KC V E +LF+ M
Sbjct: 174 TISTILPAFANVADVKHGKEVHGYSVVAGVEQELTVSSALVDMYAKCGLVLEARRLFDKM 233
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
P+R+ V+WNS+I G + +G E+ L +M+ +G PD +T VL
Sbjct: 234 PQRSTVTWNSMIFGLANSGHCQEAVGLFDRML--RDGAKPDHLTFTAVL 280
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 6/181 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L A + D++ GK VH S + +++ L+ MY+ CG L++RR+FD + R
Sbjct: 178 ILPAFANVADVKHGKEVHGY-SVVAGVEQELTVSSALVDMYAKCGLVLEARRLFDKMPQR 236
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
+ WN+++ G + + + +F + D KPD+ TF V+ AC GG+ +VG
Sbjct: 237 STVTWNSMIFGLANSGHCQEAVGLFDRMLRDGA-KPDHLTFTAVLTACSYGGMVEVG-KI 294
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSEN 279
M + G+ + ++ + G+ ++E MP E + W +++ +
Sbjct: 295 LYRAMQVEYGVEPRLEHYACMVHLLGRAGRLDEAYGFIRAMPLEPDRFVWGALLGACRSH 354
Query: 280 G 280
G
Sbjct: 355 G 355
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 116/211 (54%), Gaps = 6/211 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG G VH +V AS N F+ N L++MY CG ++R+VFD ++ R
Sbjct: 132 VLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNG-LVSMYGRCGAWENARQVFDEMRER 190
Query: 163 ---NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+L WN++V+ + + + +F ++ D ++PD + V+ AC + G
Sbjct: 191 GVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRG 250
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
VHG A + GL DVFV NA++ MY KC +EE K+FE M +++VSWN+++ G+S+
Sbjct: 251 KQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQI 310
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G ++ L K+ EE +V+T V+
Sbjct: 311 GRFDDALGLFEKIR--EEKIELNVVTWSAVI 339
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLK--TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
T +I+MY P + V L + +F WN L+ DVL ++ +
Sbjct: 62 THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQR-L 120
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+PD++TFP V+KACG I G+ VH + G +VFV N L++MYG+C E
Sbjct: 121 GWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENA 180
Query: 255 VKLFEVMPER---NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++F+ M ER +LVSWNSI+ + + G S + + +M + G PD +++V VLP
Sbjct: 181 RQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTE-DLGIRPDAVSLVNVLP 239
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 6/185 (3%)
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSL--KTRNLFQWNALVSGFTKNELYTDVLSIF 187
+D ++ LI MYS C P +R +FD + K R++ W L+ G ++ + L +F
Sbjct: 406 GDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELF 465
Query: 188 VE-LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD-VFVSNALIAMY 245
+ L D + P+ FT C + AC + + FG +H + +FV+N LI MY
Sbjct: 466 SQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMY 525
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
K V+ +F+ M +RN VSW S++ G+ +G E+ + +M + G +PD +T
Sbjct: 526 SKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQ--KVGLVPDGVT 583
Query: 306 VVTVL 310
V VL
Sbjct: 584 FVVVL 588
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 4/161 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + G+++H V + S + LI MYS G +R VFD++ RN
Sbjct: 486 LMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRN 545
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGSG 221
W +L++G+ + + L IF E+ L PD TF V+ AC G+ D G
Sbjct: 546 GVSWTSLMTGYGMHGRGEEALQIFYEMQK-VGLVPDGVTFVVVLYACSHSGMVDQGINY- 603
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+GM G++ ++ + + ++E ++L MP
Sbjct: 604 FNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMP 644
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 109/209 (52%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSN--DFIINTRLITMYSLCGFPLDSRRVFDSLK 160
LL+ C + ++ K VH + S +FSN ++ + YS C + R+FD +
Sbjct: 74 LLRDCVDARFLKQAKTVHGFLLKS-KFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMS 132
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN F W L++G +N L+ D F E+ S + PD F + +++ C G+ + G+
Sbjct: 133 QRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQG-IFPDQFAYSGILQICIGLDSIELGN 191
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH G FVS AL+ MY K +E+ K+F M E N+VSWN++I GF+ N
Sbjct: 192 MVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSND 251
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTV 309
++FDL ++MMG EG PD T + V
Sbjct: 252 LYLDAFDLFLRMMG--EGVTPDAQTFIGV 278
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 108/200 (54%), Gaps = 3/200 (1%)
Query: 111 KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNAL 170
K + +GK+VH S N I+ + Y+ CG D R+VF+ ++ R+L W +L
Sbjct: 389 KCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSL 448
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
V+ +++ + + IF + ++ + P+ FTF V+ +C + + +G VHG+ K+G
Sbjct: 449 VTAYSQCSEWDKAIEIFSNMRAEG-IAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVG 507
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
L D + +AL+ MY KC + + K+F + + VSW +II G +++G ++ L
Sbjct: 508 LDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFR 567
Query: 291 KMMGCEEGFIPDVITVVTVL 310
+M+ + G P+ +T + VL
Sbjct: 568 RMV--QLGVEPNAVTFLCVL 585
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 108/210 (51%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQ C IE+G VH + F++ ++T L+ MY+ DS +VF+++
Sbjct: 177 ILQICIGLDSIELGNMVHAQIVIRG-FTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEV 235
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WNA+++GFT N+LY D +F+ + + + PD TF V KA G + DV V
Sbjct: 236 NVVSWNAMITGFTSNDLYLDAFDLFLRMMGEG-VTPDAQTFIGVAKAIGMLRDVNKAKEV 294
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF--EVMPERNLVSWNSIICGFSENG 280
G A ++G+ + V ALI M KC ++E +F + R WN++I G+ +G
Sbjct: 295 SGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSG 354
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ ++ +L KM C+ D T +V
Sbjct: 355 FNEKALELFAKM--CQNDIYLDHYTYCSVF 382
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 11/211 (5%)
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS--LKTR 162
+A G +D+ K V SN ++ T LI M S CG ++R +F+S + R
Sbjct: 280 KAIGMLRDVNKAKEVSGYALELGVDSNT-LVGTALIDMNSKCGSLQEARSIFNSHFITCR 338
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
WNA++SG+ ++ L +F ++ + ++ D++T+ V A + + G V
Sbjct: 339 FNAPWNAMISGYLRSGFNEKALELFAKMCQN-DIYLDHYTYCSVFNAIAALKCLSLGKKV 397
Query: 223 HGMAAKMGL-IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
H A K GL + V +SNA+ Y KC +E++ K+F M +R+L+SW S++ +S+
Sbjct: 398 HARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQ--- 454
Query: 282 SCESFDLLIKMMGC--EEGFIPDVITVVTVL 310
C +D I++ EG P+ T +VL
Sbjct: 455 -CSEWDKAIEIFSNMRAEGIAPNQFTFSSVL 484
>gi|302788029|ref|XP_002975784.1| hypothetical protein SELMODRAFT_150748 [Selaginella moellendorffii]
gi|300156785|gb|EFJ23413.1| hypothetical protein SELMODRAFT_150748 [Selaginella moellendorffii]
Length = 590
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 108/178 (60%), Gaps = 1/178 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + ++ GK+VH +SAS +F D + T L+ MY+ CG +R+VF+ L+ +
Sbjct: 47 VLGACSCQNELPFGKKVHAYISAS-EFKWDISLQTSLVNMYAKCGNLEGARKVFNRLERK 105
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+ ++S + ++ +++ + I+ + S+T ++P+ TF VI AC G DV G V
Sbjct: 106 DVISWSTMISAYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGCGDVIRGRQV 165
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
HG +GL DV V +AL+ +Y KC +E+ K F+ + +R+++ WN ++ +SE G
Sbjct: 166 HGRLVSLGLETDVAVGSALVQLYVKCGNLEDAKKAFDRVEKRDVLCWNFMLSAYSERG 223
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 97/181 (53%), Gaps = 5/181 (2%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLK--TRNLFQWNALVSGFTKNELYTDVLSIFVE 189
D + +T L+ MY+ CG ++RVF S + R++ W A+++ + + + L+++
Sbjct: 308 DVVTDTALLNMYAACGNLEAAKRVFGSRRDERRDVVFWTAMIASYAQAGRGEEALALYKT 367
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
+ S+ E+KP++ T+ V+ AC + ++ G +H DV V N+L+++Y +C
Sbjct: 368 MLSE-EIKPNSVTYTSVLSACSSLGNILEGRKIHSSLEGKAEELDVAVQNSLLSLYARCG 426
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
+ + F + R++ SW ++ F+ +G S + +L+ +M C G PD +T +V
Sbjct: 427 SLRDAWSCFAKIHNRDVFSWTGMVAAFAHHGHSARALELVREMELC--GVSPDAVTFQSV 484
Query: 310 L 310
L
Sbjct: 485 L 485
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 109/244 (44%), Gaps = 44/244 (18%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++ AC D+ G++VH LVS + D + + L+ +Y CG D+++ FD ++
Sbjct: 149 VIGACTGCGDVIRGRQVHGRLVSLGLE--TDVAVGSALVQLYVKCGNLEDAKKAFDRVEK 206
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ WN ++S +++ V+ + + +++P+ T+ V+ AC + D+ G
Sbjct: 207 RDVLCWNFMLSAYSERGSPQQVIEAYDAM----DVEPNAVTYTNVLIACSAMEDLAQGQK 262
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM-------------------- 261
VH GL D+ + +L+++Y KC ++ ++FE M
Sbjct: 263 VHSRIVSSGLETDMTMETSLLSLYIKCRSLKSACQVFEAMGKKDTDVVTDTALLNMYAAC 322
Query: 262 ---------------PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
R++V W ++I +++ G E+ L M+ E P+ +T
Sbjct: 323 GNLEAAKRVFGSRRDERRDVVFWTAMIASYAQAGRGEEALALYKTMLS--EEIKPNSVTY 380
Query: 307 VTVL 310
+VL
Sbjct: 381 TSVL 384
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 81/152 (53%), Gaps = 2/152 (1%)
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
++ +N++ W+ ++ + +N + +F + S+ ++P+ T V+ AC ++ F
Sbjct: 1 MQQKNVYSWSMMIGAYAQNGRRNEAFLLFERMESEG-IRPNAVTCLHVLGACSCQNELPF 59
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G VH + D+ + +L+ MY KC +E K+F + ++++SW+++I +++
Sbjct: 60 GKKVHAYISASEFKWDISLQTSLVNMYAKCGNLEGARKVFNRLERKDVISWSTMISAYNQ 119
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+G E+ ++ ++M E P+ +T V V+
Sbjct: 120 SGRHSEAIEIY-RLMESETSVEPNAVTFVGVI 150
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 112/208 (53%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E GK VH + + SN F+ N L+ MY+ CG D+ VF + +
Sbjct: 105 VLHACACNGSLENGKDVHNYIRENDMQSNIFVCNA-LMDMYAKCGSMEDANSVFLEMPVK 163
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN ++ G++KN L + LS+F ++ E+KPD T C++ AC +A + G V
Sbjct: 164 DIISWNTMIGGYSKNSLPNEALSLFGDMV--LEMKPDGTTLACILPACASLASLDRGKEV 221
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + G D V+NAL+ MY KC LF+++P ++L++W +I G+ +GF
Sbjct: 222 HGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFG 281
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +M + G PD ++ +++L
Sbjct: 282 NNAITTFNEMR--QAGIEPDEVSFISIL 307
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 109/210 (51%), Gaps = 7/210 (3%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+LQAC + D+ +G+ VH V A + F NT L+ MY+ CG + VFD +
Sbjct: 4 ILQACANCGDVSLGRAVHGSGVKACVHWKTTFC-NT-LLDMYAKCGVLDGAILVFDLMSV 61
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R + W +L++ + + L + + +F E+ + + PD FT V+ AC + G
Sbjct: 62 RTVVTWTSLIAAYAREGLSDEAIRLFHEMDREG-VSPDIFTITTVLHACACNGSLENGKD 120
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH + + ++FV NAL+ MY KC +E+ +F MP ++++SWN++I G+S+N
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ L M+ PD T+ +LP
Sbjct: 181 PNEALSLFGDMV---LEMKPDGTTLACILP 207
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 112/205 (54%), Gaps = 4/205 (1%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC K + G ++H V S ++ D I L+ +Y+ CG ++ +F + ++
Sbjct: 456 ACAGIKAMRQGLQIHARVYVSG-YAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEI 514
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
WN L+SGF ++ LY L +F+++S K + FTF I A +AD+ G VHG
Sbjct: 515 TWNGLISGFGQSRLYEQALMVFMKMSQ-AGAKYNVFTFISAISALANLADIKQGKQVHGR 573
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
A K G + V+NALI++YGKC +E+ +F M RN VSWN+II S++G E+
Sbjct: 574 AVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEA 633
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
DL +M +EG P+ +T + VL
Sbjct: 634 LDLFDQMK--QEGLKPNDVTFIGVL 656
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 107/208 (51%), Gaps = 6/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL AC D++ GK++H L+ A F D+I L+ +Y CG + +F+
Sbjct: 251 LLAACASVGDLQKGKQLHSYLLKAGMSF--DYITEGSLLDLYVKCGDIETAHDIFNLGDR 308
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
N+ WN ++ + + IF ++ + T + P+ FT+PC+++ C + G
Sbjct: 309 TNVVLWNLMLVAYGQISDLAKSFEIFGQMQA-TGIHPNKFTYPCILRTCTCTGQIELGEQ 367
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H ++ K G D++VS LI MY K +++ K+ E++ +R++VSW S+I G+ ++ F
Sbjct: 368 IHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDF 427
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTV 309
E+ +M C G PD I + +
Sbjct: 428 CEEALATFKEMQDC--GVWPDNIGLASA 453
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 110/222 (49%), Gaps = 13/222 (5%)
Query: 98 EATGV---------LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGF 148
+ATG+ +L+ C IE+G+++H L S F +D ++ LI MYS
Sbjct: 338 QATGIHPNKFTYPCILRTCTCTGQIELGEQIHSL-SIKNGFESDMYVSGVLIDMYSKYRC 396
Query: 149 PLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIK 208
+R++ + L+ R++ W ++++G+ +++ + L+ F E+ D + PDN
Sbjct: 397 LDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQ-DCGVWPDNIGLASAAS 455
Query: 209 ACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS 268
AC GI + G +H G D+ + N L+ +Y +C EE LF + ++ ++
Sbjct: 456 ACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEIT 515
Query: 269 WNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
WN +I GF ++ ++ + +KM + G +V T ++ +
Sbjct: 516 WNGLISGFGQSRLYEQALMVFMKM--SQAGAKYNVFTFISAI 555
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 105/237 (44%), Gaps = 9/237 (3%)
Query: 75 EESKSLNKALSLLQENLHNADLKEATGVLLQAC-GHEKDIEIGKRVHELVSASTQFSNDF 133
E+ SL A + L +ADL A LQAC G + +H S D
Sbjct: 24 EKILSLVAAKASHHRALGSADLTCA----LQACRGRGNRWPLVLEIHA-TSVVRGLGADR 78
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
+I LI +Y+ G +R+VF L +R+ W A++SG+ + L + ++ ++
Sbjct: 79 LIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHW- 137
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
T + P + V+ AC G +H K + FV NALIA+Y +
Sbjct: 138 TAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKL 197
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F M + V++N++I G ++ G + + +M G PD +TV ++L
Sbjct: 198 AERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQ--LSGLRPDCVTVASLL 252
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC K G+ +H V S F+ N LI +Y G + RVF +
Sbjct: 150 VLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNA-LIALYLGFGSFKLAERVFCDMLFC 208
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ +N L+SG + L IF E+ + L+PD T ++ AC + D+ G +
Sbjct: 209 DRVTFNTLISGHAQCGHGECALQIFDEMQL-SGLRPDCVTVASLLAACASVGDLQKGKQL 267
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G+ D +L+ +Y KC +E +F + N+V WN ++ + +
Sbjct: 268 HSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDL 327
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+SF++ +M G P+ T +L
Sbjct: 328 AKSFEIFGQMQA--TGIHPNKFTYPCIL 353
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
DI+ GK+VH + S + N LI++Y CG D++ +F + RN WN ++
Sbjct: 563 DIKQGKQVHGRAVKTGHTSETEVANA-LISLYGKCGSIEDAKMIFSEMSLRNEVSWNTII 621
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG-SGVHGMAAKMG 230
+ +++ + L +F ++ + LKP++ TF V+ AC + V G S M+ G
Sbjct: 622 TSCSQHGRGLEALDLFDQMKQEG-LKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYG 680
Query: 231 L--IGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
L I D + ++ + G+ ++ + + MP N + W +++
Sbjct: 681 LNPIPDHYA--CVVDILGRAGQLDRARRFVDEMPITANAMIWRTLL 724
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 116/209 (55%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL++C K +E GK++H L ++ D + T+L+ YS+C ++ +FD +
Sbjct: 64 LLESCISAKALEPGKQLHARLCQLGIAYNLD--LATKLVNFYSVCNSLRNAHHLFDKIPK 121
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
NLF WN L+ + N + +S++ ++ + LKPDNFT P V+KAC ++ +G G
Sbjct: 122 GNLFLWNVLIRAYAWNGPHETAISLYHQML-EYGLKPDNFTLPFVLKACSALSTIGEGRV 180
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H + G DVFV AL+ MY KC V + +F+ + +R+ V WNS++ +++NG
Sbjct: 181 IHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGH 240
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
ES L +M +G P T+VTV+
Sbjct: 241 PDESLSLCCEMAA--KGVRPTEATLVTVI 267
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 111/208 (53%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC I G+ +HE V S + D + L+ MY+ CG +D+R VFD + R
Sbjct: 165 VLKACSALSTIGEGRVIHERVIRSG-WERDVFVGAALVDMYAKCGCVVDARHVFDKIVDR 223
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN++++ + +N + LS+ E+++ ++P T VI + IA + G +
Sbjct: 224 DAVLWNSMLAAYAQNGHPDESLSLCCEMAAKG-VRPTEATLVTVISSSADIACLPHGREI 282
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + G + V ALI MY KC V+ LFE + E+ +VSWN+II G++ +G +
Sbjct: 283 HGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLA 342
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL +MM + PD IT V L
Sbjct: 343 VEALDLFERMMKEAQ---PDHITFVGAL 367
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ T LI MY+ CG + +F+ L+ + + WNA+++G+ + L + L +F +
Sbjct: 297 VKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMK-- 354
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG-DVFVSNALIAMYGKCAFVEE 253
E +PD+ TF + AC + G ++ + + I V ++ + G C ++E
Sbjct: 355 EAQPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDE 414
Query: 254 ---MVKLFEVMPERNLVSWNSII 273
+++ +VMP+ + W +++
Sbjct: 415 AYDLIRQMDVMPDSGV--WGALL 435
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+++ + ++++C + G +H ++G+ ++ ++ L+ Y C + LF
Sbjct: 57 NHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLF 116
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +P+ NL WN +I ++ NG + L +M+ E G PD T+ VL
Sbjct: 117 DKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQML--EYGLKPDNFTLPFVL 166
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC D E+G ++H LV + ++ F+ LI +Y+ CGF ++ +VFD + +
Sbjct: 114 VLKACARVLDSELGVKMHSLVVKAGCEADAFV-KISLINLYTKCGFIDNAFKVFDDIPDK 172
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N W A +SG+ + + +F L + L+PD+F+ V+ AC D+ G +
Sbjct: 173 NFASWTATISGYVGVGKCREAIDMFRRLL-EMGLRPDSFSLVEVLSACKRTGDLRSGEWI 231
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ G++ +VFV+ AL+ YGKC +E +F+ M E+N+VSW+S+I G++ NG
Sbjct: 232 DEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLP 291
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL KM+ EG PD +V VL
Sbjct: 292 KEALDLFFKML--NEGLKPDCYAMVGVL 317
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 3/159 (1%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
S R+ D K N+F +N ++ G N+ + + + I+ + + L PD+FTFP V+KAC
Sbjct: 61 SFRILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEG-LSPDSFTFPFVLKACA 119
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
+ D G +H + K G D FV +LI +Y KC F++ K+F+ +P++N SW +
Sbjct: 120 RVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTA 179
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I G+ G E+ D+ +++ E G PD ++V VL
Sbjct: 180 TISGYVGVGKCREAIDMFRRLL--EMGLRPDSFSLVEVL 216
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC D+ G+ + E ++ + N F+ T L+ Y CG +R VFD + +
Sbjct: 215 VLSACKRTGDLRSGEWIDEYITENGMVRNVFVA-TALVDFYGKCGNMERARSVFDGMLEK 273
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W++++ G+ N L + L +F ++ ++ LKPD + V+ +C + + G
Sbjct: 274 NIVSWSSMIQGYASNGLPKEALDLFFKMLNEG-LKPDCYAMVGVLCSCARLGALELGDWA 332
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ + + + ALI MY KC ++ ++F M +++ V WN+ I G + +G
Sbjct: 333 SNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHV 392
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M + G PD T V +L
Sbjct: 393 KDALGLFGQME--KSGIKPDRNTFVGLL 418
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 112/207 (54%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC K G ++H L N + NT ++ MY CG +++ +FD ++ R+
Sbjct: 347 LTACSVIKGHLEGIQLHGLAVKCGLGFNICVANT-ILDMYGKCGALVEACTIFDDMERRD 405
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WNA+++ +NE LS+FV + T ++PD+FT+ V+KAC G + +G +H
Sbjct: 406 AVSWNAIIAAHEQNEEIVKTLSLFVSMLRST-MEPDDFTYGSVVKACAGQQALNYGMEIH 464
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G K G+ D FV +AL+ MYGKC + E K+ + + E+ VSWNSII GFS S
Sbjct: 465 GRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSE 524
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +M+ E G IPD T TVL
Sbjct: 525 NAQRYFSQML--EMGVIPDNFTYATVL 549
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 117/215 (54%), Gaps = 4/215 (1%)
Query: 78 KSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
K+L+ +S+L+ + D G +++AC ++ + G +H + S D+ + +
Sbjct: 424 KTLSLFVSMLRSTMEPDDF--TYGSVVKACAGQQALNYGMEIHGRIVKSG-MGLDWFVGS 480
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L+ MY CG +++ ++ D L+ + WN+++SGF+ + + F ++ + +
Sbjct: 481 ALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQML-EMGVI 539
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
PDNFT+ V+ C +A + G +H K+ L DV++++ L+ MY KC +++ +
Sbjct: 540 PDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLM 599
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
FE P+R+ V+W+++IC ++ +G ++ L +M
Sbjct: 600 FEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEM 634
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 89/162 (54%), Gaps = 1/162 (0%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I +I Y+ G ++ +FD++ R++ WN+L+S + N + + IFV +
Sbjct: 71 DVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMR 130
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
S ++ D TF V+KAC GI D G G VH +A +MG DV +AL+ MY KC +
Sbjct: 131 S-LKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKL 189
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
+ ++F MPERNLV W+++I G+ +N E L M+
Sbjct: 190 DGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDML 231
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 93/178 (52%), Gaps = 2/178 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V+L+AC +D +G +VH L + F ND + + L+ MYS C + R+F +
Sbjct: 143 VVLKACSGIEDYGLGLQVHCL-AIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPE 201
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
RNL W+A+++G+ +N+ + + L +F ++ + T+ V ++C G++ G+
Sbjct: 202 RNLVCWSAVIAGYVQNDRFIEGLKLFKDMLK-VGMGVSQSTYASVFRSCAGLSAFKLGTQ 260
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+HG A K D + A + MY KC + + K+F +P S+N+II G++
Sbjct: 261 LHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQ 318
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ ++C ++G ++H + + F+ D II T + MY+ C D+ +VF++L
Sbjct: 245 VFRSCAGLSAFKLGTQLHGH-ALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNP 303
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+NA++ G+ + + L IF L T L D + + AC I G +
Sbjct: 304 PRQSYNAIIVGYARQDQGLKALEIFQSLQR-TYLSFDEISLSGALTACSVIKGHLEGIQL 362
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+A K GL ++ V+N ++ MYGKC + E +F+ M R+ VSWN+II +N
Sbjct: 363 HGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEI 422
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L + M+ PD T +V+
Sbjct: 423 VKTLSLFVSML--RSTMEPDDFTYGSVV 448
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 201 FTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV 260
FTF +++ C + + G H + ++V+N L+ Y K + + K+F+
Sbjct: 7 FTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDR 66
Query: 261 MPERNLVSWNSIICGFSE---NGFSCESFDLL 289
MP R+++SWN++I G++E GF+ FD +
Sbjct: 67 MPHRDVISWNTMIFGYAEIGNMGFAQSLFDTM 98
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 109/209 (52%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSN--DFIINTRLITMYSLCGFPLDSRRVFDSLK 160
LL+ C + ++ K VH + S +FSN ++ + YS C + R+FD +
Sbjct: 74 LLRDCVDARFLKQAKTVHGFLLKS-KFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMS 132
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN F W L++G +N L+ D F E+ S + PD F + +++ C G+ + G+
Sbjct: 133 QRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQG-IFPDQFAYSGILQICIGLDSIELGN 191
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH G FVS AL+ MY K +E+ K+F M E N+VSWN++I GF+ N
Sbjct: 192 MVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSND 251
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTV 309
++FDL ++MMG EG PD T + V
Sbjct: 252 LYLDAFDLFLRMMG--EGVTPDAQTFIGV 278
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 108/200 (54%), Gaps = 3/200 (1%)
Query: 111 KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNAL 170
K + +GK+VH S N I+ + Y+ CG D R+VF+ ++ R+L W +L
Sbjct: 389 KCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSL 448
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
V+ +++ + + IF + ++ + P+ FTF V+ +C + + +G VHG+ K+G
Sbjct: 449 VTAYSQCSEWDKAIEIFSNMRAEG-IAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVG 507
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
L D + +AL+ MY KC + + K+F + + VSW +II G +++G ++ L
Sbjct: 508 LDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFR 567
Query: 291 KMMGCEEGFIPDVITVVTVL 310
+M+ + G P+ +T + VL
Sbjct: 568 RMV--QLGVEPNAVTFLCVL 585
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 108/210 (51%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQ C IE+G VH + F++ ++T L+ MY+ DS +VF+++
Sbjct: 177 ILQICIGLDSIELGNMVHAQIVIRG-FTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEV 235
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WNA+++GFT N+LY D +F+ + + + PD TF V KA G + DV V
Sbjct: 236 NVVSWNAMITGFTSNDLYLDAFDLFLRMMGEG-VTPDAQTFIGVAKAIGMLRDVNKAKEV 294
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF--EVMPERNLVSWNSIICGFSENG 280
G A ++G+ + V ALI M KC ++E +F + R WN++I G+ +G
Sbjct: 295 SGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSG 354
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ ++ +L KM C+ D T +V
Sbjct: 355 FNEKALELFAKM--CQNDIYLDHYTYCSVF 382
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 11/211 (5%)
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS--LKTR 162
+A G +D+ K V SN ++ T LI M S CG ++R +F+S + R
Sbjct: 280 KAIGMLRDVNKAKEVSGYALELGVDSNT-LVGTALIDMNSKCGSLQEARSIFNSHFITCR 338
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
WNA++SG+ ++ L +F ++ + ++ D++T+ V A + + G V
Sbjct: 339 FNAPWNAMISGYLRSGFNEKALELFAKMCQN-DIYLDHYTYCSVFNAIAALKCLSLGKKV 397
Query: 223 HGMAAKMGL-IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
H A K GL + V +SNA+ Y KC +E++ K+F M +R+L+SW S++ +S+
Sbjct: 398 HARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQ--- 454
Query: 282 SCESFDLLIKMMGC--EEGFIPDVITVVTVL 310
C +D I++ EG P+ T +VL
Sbjct: 455 -CSEWDKAIEIFSNMRAEGIAPNQFTFSSVL 484
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 112/208 (53%), Gaps = 2/208 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG D+E+G+ V V N +I + LI+MY+ CG +RR+FD + R
Sbjct: 224 VLGACGELGDLELGRWVEGFVVERGMTLNSYI-GSALISMYAKCGDLGSARRIFDGMAAR 282
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA++SG+ +N + + +S+F + D + + T V+ AC I + G +
Sbjct: 283 DVITWNAVISGYAQNGMADEAISLFHAMKEDC-VTENKITLTAVLSACATIGALDLGKQI 341
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
A++ G D+FV+ ALI MY KC + ++F+ MP++N SWN++I + +G +
Sbjct: 342 DEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEASWNAMISALASHGKA 401
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M G P+ IT V +L
Sbjct: 402 KEALSLFQCMSDEGGGARPNDITFVGLL 429
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 110/205 (53%), Gaps = 3/205 (1%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
+C + + + H LV S+ ++ LITMYS CG +R+VFD + R+L
Sbjct: 125 SCANLAVLSPARAAHSLVFKLALHSDPHTTHS-LITMYSRCGRVAFARKVFDEIPRRDLV 183
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
WN++++G+ K + + +F E+ +PD + V+ ACG + D+ G V G
Sbjct: 184 SWNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGF 243
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
+ G+ + ++ +ALI+MY KC + ++F+ M R++++WN++I G+++NG + E+
Sbjct: 244 VVERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEA 303
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
L M E+ + IT+ VL
Sbjct: 304 ISLFHAMK--EDCVTENKITLTAVL 326
>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 638
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 120/209 (57%), Gaps = 2/209 (0%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V L+ACG ++++ G+ +H + + +D + + LI MY CG ++ R+F+ L+
Sbjct: 46 VALKACGELREVKYGEMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEK 105
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ W+++VSGF KN + F +++ +++ PD T ++ AC +++ G
Sbjct: 106 PDIVTWSSMVSGFEKNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRC 165
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VHG + G D+ + N+L+ Y K +E V LF++M E++++SW+++I + +NG
Sbjct: 166 VHGFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGA 225
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ + +M+ ++G P+V TV+ VL
Sbjct: 226 AAEALRVFNEMI--DDGTEPNVATVLCVL 252
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 92/153 (60%), Gaps = 3/153 (1%)
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ R L+QWN L+ ++++ + V+ F ++ D E KPDNFT P +KACG + +V +
Sbjct: 1 MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEE-KPDNFTLPVALKACGELREVKY 59
Query: 219 GSGVHGMAAKMGLIG-DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G +HG K +G D++V ++LI MY KC + E +++F + + ++V+W+S++ GF
Sbjct: 60 GEMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFE 119
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+NG ++ + + M PD +T++T++
Sbjct: 120 KNGSPYQAVEFF-RRMATASDVTPDRVTLITLV 151
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 107/231 (46%), Gaps = 4/231 (1%)
Query: 82 KALSLLQENLHNADLKEATGVL--LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
+AL + E + + VL LQAC D+E G++ HEL + + ++T L
Sbjct: 228 EALRVFNEMIDDGTEPNVATVLCVLQACAAANDLEQGRKTHEL-AIRKGLETEVKVSTAL 286
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
+ MY C P ++ VF + +++ W AL+SGFT N + + F + + +PD
Sbjct: 287 VDMYMKCFSPEEAYAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPD 346
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
V+ +C + + H K G + F+ +L+ +Y +C + K+F
Sbjct: 347 AILMLKVLGSCSELGFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFN 406
Query: 260 VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ V W S+I G+ +G ++ + M+ E P+ +T +++L
Sbjct: 407 EIALKDTVVWTSLITGYGIHGKGTKALETFNHMVRSSE-VKPNEVTFLSIL 456
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 13/111 (11%)
Query: 101 GVLLQA-CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
G L QA C H I+ G F ++ I L+ +YS CG ++ +VF+ +
Sbjct: 361 GFLKQAECFHSYVIKYG------------FDSNPFIGASLVELYSRCGSLGNASKVFNEI 408
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
++ W +L++G+ + T L F + +E+KP+ TF ++ AC
Sbjct: 409 ALKDTVVWTSLITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSAC 459
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 116/207 (56%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+AC + + IG++V + FS+ + LI+MY+ G D+R+ FD L +N
Sbjct: 383 LKACANLAALRIGEQVFTH-AVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKN 441
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L +N ++ + KN + L +F E+ D + FTF ++ I +G G +H
Sbjct: 442 LISYNTVIDAYAKNLNSEEALELFNEIE-DQGMGASAFTFASLLSGAASIGTIGKGEQIH 500
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
K GL + V NALI+MY +C +E ++FE M +RN++SW SII GF+++GF+
Sbjct: 501 ARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFAT 560
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L KM+ EEG P+++T + VL
Sbjct: 561 QALELFHKML--EEGVRPNLVTYIAVL 585
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 121/238 (50%), Gaps = 13/238 (5%)
Query: 80 LNKALSLLQENLHNA---DLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
L+KA+S L+ +H DL+ + + L+ C + +IG VHE ++ S + +N
Sbjct: 47 LHKAISTLEHMVHQGSHPDLQTYS-LFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLN 105
Query: 137 TRLITMYSLCGFPLDSRRVFDSL-KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
+ LI++YS CG + +F + +R+L W+A+VS F N + L FV++ +
Sbjct: 106 S-LISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENG- 163
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG-LIGDVFVSNALIAMY--GKCAFVE 252
P+ + F +AC V G + G K G L DV V LI M+ G+ V
Sbjct: 164 YYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVS 223
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+FE MPERN V+W +I + G++ E+ DL ++M+ G+ PD T+ V+
Sbjct: 224 AF-KVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMI--LSGYEPDRFTLSGVI 278
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 107/191 (56%), Gaps = 6/191 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC---GFPLDSRRVFDSL 159
++ AC + + + +G+++H + + D + LI MY+ C G +R++FD +
Sbjct: 277 VISACANMELLLLGQQLHSQ-AIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI 335
Query: 160 KTRNLFQWNALVSGFTKNELYTD-VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
N+F W A+++G+ + Y + L +F + T + P++FTF +KAC +A +
Sbjct: 336 LDHNVFSWTAMITGYVQKGGYDEEALDLFRGMIL-THVIPNHFTFSSTLKACANLAALRI 394
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G V A K+G V+N+LI+MY + +++ K F+++ E+NL+S+N++I +++
Sbjct: 395 GEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAK 454
Query: 279 NGFSCESFDLL 289
N S E+ +L
Sbjct: 455 NLNSEEALELF 465
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 6/194 (3%)
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC-GFPLDSRRVFDSLKTRN 163
+AC + + +G + V + +D + LI M+ G + + +VF+ + RN
Sbjct: 176 RACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERN 235
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
W +++ + + + +F+E+ + +PD FT VI AC + + G +H
Sbjct: 236 AVTWTLMITRLMQFGYAGEAIDLFLEMIL-SGYEPDRFTLSGVISACANMELLLLGQQLH 294
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV---KLFEVMPERNLVSWNSIICGF-SEN 279
A + GL D V LI MY KC+ M K+F+ + + N+ SW ++I G+ +
Sbjct: 295 SQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKG 354
Query: 280 GFSCESFDLLIKMM 293
G+ E+ DL M+
Sbjct: 355 GYDEEALDLFRGMI 368
>gi|242096420|ref|XP_002438700.1| hypothetical protein SORBIDRAFT_10g024650 [Sorghum bicolor]
gi|241916923|gb|EER90067.1| hypothetical protein SORBIDRAFT_10g024650 [Sorghum bicolor]
Length = 431
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 117/212 (55%), Gaps = 7/212 (3%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+LLQ C + +D+ +GKR+H + A T F I T+L+ Y G ++++FD +
Sbjct: 40 LLLQECVNRRDVRLGKRIHARMVA-TGFRCSAYIATKLLIFYVKIGDLGCAQKLFDGMPQ 98
Query: 162 RNLFQWNALVSGFTKN---ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
R++ WNA++SG + E + +F + ++ L PD FTF V+ AC +A +G
Sbjct: 99 RSVVAWNAVISGCARGGSAEAQERAVELFDAMRAEG-LAPDQFTFASVLCACARLAALGH 157
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G VHG+A K + G+VF ++AL+ MY KC+ + ++F PERN+ W ++I G +
Sbjct: 158 GRRVHGVAVKCDVGGNVFANSALVDMYLKCSCPGDAHRVFAAAPERNVTMWTAVISGHGQ 217
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ L +M +G P+ +T + VL
Sbjct: 218 QGRVAEALALFDRMAA--DGLRPNDVTFLAVL 247
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 7/193 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + G+RVH V+ + N+ L+ MY C P D+ RVF + R
Sbjct: 145 VLCACARLAALGHGRRVHG-VAVKCDVGGNVFANSALVDMYLKCSCPGDAHRVFAAAPER 203
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
N+ W A++SG + + L++F +++D L+P++ TF V+ AC GG+ D G
Sbjct: 204 NVTMWTAVISGHGQQGRVAEALALFDRMAADG-LRPNDVTFLAVLSACAHGGLVDEGL-R 261
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP--ERNLVSWNSIICGFSE 278
M+ + GL A++ M + + + +L + +P + + V W +I+ +
Sbjct: 262 RFSSMSMEYGLTPRGPHYAAVVDMLARVGRLHDAYELVKNLPDCQEHSVVWGAILGACRK 321
Query: 279 NGFSCESFDLLIK 291
+G E +L +
Sbjct: 322 HGGDVELVELAAR 334
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Query: 181 TDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNA 240
T LS V L + + P T+ +++ C DV G +H G +++
Sbjct: 16 TGHLSKAVSLLCRSPVCPGAGTYALLLQECVNRRDVRLGKRIHARMVATGFRCSAYIATK 75
Query: 241 LIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC--EEG 298
L+ Y K + KLF+ MP+R++V+WN++I G + G S E+ + +++ EG
Sbjct: 76 LLIFYVKIGDLGCAQKLFDGMPQRSVVAWNAVISGCARGG-SAEAQERAVELFDAMRAEG 134
Query: 299 FIPDVITVVTVL 310
PD T +VL
Sbjct: 135 LAPDQFTFASVL 146
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 115/210 (54%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L ACG I GK++H + T F + + + LI MY C ++ VFD +K
Sbjct: 274 GSVLPACGGLGAINEGKQIHACI-IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 332
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+N+ W A+V G+ + + + IF+++ + + PD++T I AC ++ + GS
Sbjct: 333 QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR-SGIDPDHYTLGQAISACANVSSLEEGS 391
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
HG A GLI V VSN+L+ +YGKC +++ +LF M R+ VSW +++ +++ G
Sbjct: 392 QFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFG 451
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ L KM+ + G PD +T+ V+
Sbjct: 452 RAVETIQLFDKMV--QHGLKPDGVTLTGVI 479
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 35/228 (15%)
Query: 108 GHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQW 167
GH + +GK++H V F + ++ + L+ MY+ G D+++VF L RN +
Sbjct: 153 GH---VSLGKQIHGQV-IKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMY 208
Query: 168 NALVSGFTKNELYTDVLSIFVELSSDT-----------------------------ELKP 198
N+L+ G + D L +F + D+ LK
Sbjct: 209 NSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKM 268
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D + F V+ ACGG+ + G +H + ++V +ALI MY KC + +F
Sbjct: 269 DQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVF 328
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
+ M ++N+VSW +++ G+ + G + E+ + + M G PD T+
Sbjct: 329 DRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQ--RSGIDPDHYTL 374
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 83/182 (45%), Gaps = 4/182 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G + AC + +E G + H + ++ + ++ L+T+Y CG DS R+F+ +
Sbjct: 375 GQAISACANVSSLEEGSQFHG-KAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R+ W A+VS + + + + +F ++ LKPD T VI AC V G
Sbjct: 434 VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG-LKPDGVTLTGVISACSRAGLVEKGQ 492
Query: 221 GVHG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSE 278
M ++ G++ + + +I ++ + +EE ++ MP + + W +++
Sbjct: 493 RYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRN 552
Query: 279 NG 280
G
Sbjct: 553 KG 554
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 90/237 (37%), Gaps = 37/237 (15%)
Query: 87 LQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC 146
+ N ++ +K+ G+ G K +H + + + F+ N ++ Y+L
Sbjct: 1 MASNYYSVQIKQCIGL-----GARNQSRYVKMIHGNIIRALPYPETFLYNN-IVHAYALM 54
Query: 147 GFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS-------------- 192
+RRVFD + NLF WN L+ ++K L +++ S F +L
Sbjct: 55 KSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYS 114
Query: 193 -----------------DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
D T ++K V G +HG K+G +
Sbjct: 115 LSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYL 174
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
V + L+ MY + + K+F + +RN V +NS++ G G ++ L M
Sbjct: 175 LVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM 231
>gi|225217011|gb|ACN85298.1| EMB2261 putative [Oryza coarctata]
Length = 621
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 117/210 (55%), Gaps = 6/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G ++ A G+ K G++ H V + + I+ + + MY+ C +++R+VFD ++
Sbjct: 242 GSMMTALGNLKMGNRGRQAHAQV-VTRGLCGNVIVESSTLDMYAKCRMIVEARKVFDRMQ 300
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN W AL+ G+ +N Y V+++F E+ D + D ++ V++AC G++ V G
Sbjct: 301 VRNAVSWCALLGGYCQNGEYEKVVALFREMDKDDD---DWYSLGTVLRACAGLSSVNPGK 357
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H +MG +V V +AL+ +Y KC V+ +FE RN ++WN++I GF++NG
Sbjct: 358 EIHCRFLRMGGWRNVVVESALVDLYAKCGAVDYAYGVFEASIVRNTITWNAMIGGFAQNG 417
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ DL +M+ +EG PD I+ V VL
Sbjct: 418 HGERAIDLFDRMV--KEGPRPDYISFVGVL 445
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 5/204 (2%)
Query: 81 NKALSLLQENLHNADL----KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
+ALS L+ L AD A ++AC +D G +H + F +D I+
Sbjct: 116 RRALSSLRSMLAGADDVSPNAHAFSAAVKACAVLRDRNAGACLHGSILVRG-FGDDDIVL 174
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
+ L+ MY P D+R+ F+ ++T + + +L+S F +N+ + + + + +
Sbjct: 175 SALVDMYGHAAAPGDARKAFEEMRTPDGICYTSLISAFVRNDWFEEAVRWSRSMLMLNGV 234
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
+PD TF ++ A G + G H GL G+V V ++ + MY KC + E K
Sbjct: 235 RPDGCTFGSMMTALGNLKMGNRGRQAHAQVVTRGLCGNVIVESSTLDMYAKCRMIVEARK 294
Query: 257 LFEVMPERNLVSWNSIICGFSENG 280
+F+ M RN VSW +++ G+ +NG
Sbjct: 295 VFDRMQVRNAVSWCALLGGYCQNG 318
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 3/197 (1%)
Query: 82 KALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLIT 141
K ++L +E + D + G +L+AC + GK +H + N ++ + L+
Sbjct: 322 KVVALFREMDKDDDDWYSLGTVLRACAGLSSVNPGKEIHCRFLRMGGWRN-VVVESALVD 380
Query: 142 MYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF 201
+Y+ CG + VF++ RN WNA++ GF +N + +F + + +PD
Sbjct: 381 LYAKCGAVDYAYGVFEASIVRNTITWNAMIGGFAQNGHGERAIDLFDRMVKEGP-RPDYI 439
Query: 202 TFPCVIKACGGIADVGFGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV 260
+F V+ AC V G + M+ + + N ++ + + +EE L
Sbjct: 440 SFVGVLFACSHTGMVEQGRKYFNSMSKDYSITPGIEHYNCMVDLLSRVELLEEAEDLINK 499
Query: 261 MPERNLVSWNSIICGFS 277
P R+ S + I G S
Sbjct: 500 SPFRDDSSLWAAILGAS 516
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 112/196 (57%), Gaps = 5/196 (2%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-TRNLFQWNALVSGFT 175
+R+H LV + +DF + +LI YS P S VF + +N++ WN+++ F+
Sbjct: 24 RRIHALVISLGLDGSDFF-SGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSIIRAFS 82
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
KN + L + +L ++++ PD +TFP VIKAC G+ D G V+ +MG D+
Sbjct: 83 KNGWFPKALEFYGKLR-ESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDL 141
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+V NAL+ MY + + ++F+ MP R+LVSWNS+I G+S +G+ E+ ++ ++
Sbjct: 142 YVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRN- 200
Query: 296 EEGFIPDVITVVTVLP 311
+PD TV +VLP
Sbjct: 201 -SWIVPDSFTVSSVLP 215
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 117/208 (56%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC D E+G V++ + F +D + L+ MYS G +R+VFD + R
Sbjct: 112 VIKACAGLFDAEMGDLVYKQI-LEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVR 170
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN+L+SG++ + Y + L I+ EL ++ + PD+FT V+ A + V G G+
Sbjct: 171 DLVSWNSLISGYSSHGYYEEALEIYHELR-NSWIVPDSFTVSSVLPAFANLLVVKQGQGL 229
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K G+ V+N L+AMY K + + ++F+ M R+ V++N++ICG+ +
Sbjct: 230 HGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMV 289
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
ES + ++ + + F PD++TV +VL
Sbjct: 290 EESVKMFLENL---DQFKPDILTVTSVL 314
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 122/234 (52%), Gaps = 7/234 (2%)
Query: 80 LNKALSLLQENLHN--ADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
+ +++ + ENL D+ T VL ACGH +D+ + K ++ + F + +
Sbjct: 289 VEESVKMFLENLDQFKPDILTVTSVLC-ACGHLRDLSLAKYIYNYM-LRAGFVLESTVKN 346
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
LI +Y+ CG + +R VF+S++ ++ WN+++SG+ ++ + + +F ++ E +
Sbjct: 347 ILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLF-KMMMIMEEQ 405
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
D+ T+ +I +AD+ FG G+H K G+ D+ VSNALI MY KC V + +K+
Sbjct: 406 ADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKI 465
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
F M + V+WN++I G + +M + +PD+ T + LP
Sbjct: 466 FNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMR--KNKVVPDMATFLVTLP 517
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 2/164 (1%)
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
++N L+ MY P D+RRVFD + R+ +N ++ G+ K E+ + + +F+E +
Sbjct: 243 VVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLE--NL 300
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+ KPD T V+ ACG + D+ ++ + G + + V N LI +Y KC +
Sbjct: 301 DQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMIT 360
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEE 297
+F M ++ VSWNSII G+ ++G E+ L MM EE
Sbjct: 361 ARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE 404
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 98/199 (49%), Gaps = 4/199 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
D++ GK +H S + D ++ LI MY+ CG DS ++F+S+ T + WN ++
Sbjct: 423 DLKFGKGLHSNGIKSGIYI-DLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVI 481
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
S + + L + ++ + ++ PD TF + C +A G +H + G
Sbjct: 482 SACVRFGDFATGLQVTTQMRKN-KVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGY 540
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
++ + NALI MY KC +E ++FE M R++V+W +I + G ++ + +
Sbjct: 541 ESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVD 600
Query: 292 MMGCEEGFIPDVITVVTVL 310
M + G +PD + + ++
Sbjct: 601 ME--KSGIVPDSVVFIALI 617
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 138/268 (51%), Gaps = 21/268 (7%)
Query: 45 KEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQE-NLHNADLKEAT-GV 102
+EK S+S +A + GL +A+ L +E L N ++ + T G
Sbjct: 235 QEKDSISWTAMIAGFTQNGLD---------------REAIDLFREMRLENLEMDQYTFGS 279
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG ++ GK+VH + T + ++ + + L+ MY C + VF + +
Sbjct: 280 VLTACGGVMALQEGKQVHAYI-IRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCK 338
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A++ G+ +N + + IF ++ ++ ++PD+FT VI +C +A + G+
Sbjct: 339 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNG-IEPDDFTLGSVISSCANLASLEEGAQF 397
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A GLI + VSNAL+ +YGKC +E+ +LF M + VSW +++ G+++ G +
Sbjct: 398 HCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKA 457
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M+ GF PD +T + VL
Sbjct: 458 NETLRLFESMLA--HGFKPDKVTFIGVL 483
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 97/179 (54%), Gaps = 3/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ ++ LI C DSR++F ++ ++ W A+++GFT+N L + + +F E+
Sbjct: 207 NVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMR 266
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ L+ D +TF V+ ACGG+ + G VH + ++FV +AL+ MY KC +
Sbjct: 267 LEN-LEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSI 325
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +F M +N+VSW +++ G+ +NG+S E+ + M G PD T+ +V+
Sbjct: 326 KSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQN--NGIEPDDFTLGSVI 382
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 32/193 (16%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
N + NT L + L P + RVF ++ TR++ WN+L+S + + + +
Sbjct: 74 NLYSWNTLLSSYSKLACLP-EMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLM 132
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK--- 247
+ + ++ V G VHG K G VFV + L+ MY K
Sbjct: 133 LYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGL 192
Query: 248 ----------------------------CAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
C+ +E+ +LF M E++ +SW ++I GF++N
Sbjct: 193 VFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQN 252
Query: 280 GFSCESFDLLIKM 292
G E+ DL +M
Sbjct: 253 GLDREAIDLFREM 265
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 10/185 (5%)
Query: 101 GVLLQACGHEKDIEIGKRVH--ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
G ++ +C + +E G + H LVS F ++ L+T+Y CG DS R+F
Sbjct: 379 GSVISSCANLASLEEGAQFHCRALVSGLISF---ITVSNALVTLYGKCGSIEDSHRLFSE 435
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ + W ALVSG+ + + L +F + + KPD TF V+ AC V
Sbjct: 436 MSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHG-FKPDKVTFIGVLSACSRAGLVQK 494
Query: 219 GSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII--C 274
G+ + M + +I +I ++ + +EE K MP + + W S++ C
Sbjct: 495 GNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSC 554
Query: 275 GFSEN 279
F N
Sbjct: 555 RFHRN 559
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
++F+ N L++ Y K + ++F+ MP+RNL SWN+++ +S+
Sbjct: 43 EIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSK 87
>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 666
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 107/195 (54%), Gaps = 3/195 (1%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
KR+H L+ FS+ + ++L T Y+ C + +FD L LF WNA++ + +
Sbjct: 31 KRLHALILTLGIFSSSNLC-SKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMMRMYVQ 89
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF 236
D L++FVE+ PD FT+P VIKACG ++ + G G+HG K G D F
Sbjct: 90 IGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDTF 149
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCE 296
V N L+AMY E +F+ M ER ++SWN++I G+ N + ++ ++ +MM +
Sbjct: 150 VQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMM--D 207
Query: 297 EGFIPDVITVVTVLP 311
G PD TVV+VLP
Sbjct: 208 VGVEPDCATVVSVLP 222
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 116/209 (55%), Gaps = 4/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V+++ACG I++G +H S+ F+ NT L+ MY G ++ VFD ++
Sbjct: 118 VVIKACGDLSLIDVGVGIHGQTFKFGYDSDTFVQNT-LLAMYMNAGEKEAAQLVFDPMQE 176
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R + WN +++G+ +N D ++++ + D ++PD T V+ ACG + +V G
Sbjct: 177 RTVISWNTMINGYFRNNCAEDAVNVYGRMM-DVGVEPDCATVVSVLPACGLLKNVELGRE 235
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH + + G G++ V NAL+ MY KC ++E L + M ++++V+W ++I G+ NG
Sbjct: 236 VHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWLLAKGMDDKDVVTWTTLINGYILNG- 294
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S +L MM C EG P+ +++ ++L
Sbjct: 295 DARSALMLCGMMQC-EGVKPNSVSIASLL 322
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG K++E+G+ VH LV F + ++ L+ MY CG ++ + + +
Sbjct: 220 VLPACGLLKNVELGREVHTLVQ-EKGFWGNIVVRNALVDMYVKCGQMKEAWLLAKGMDDK 278
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W L++G+ N L + + + +KP++ + ++ ACG + + G +
Sbjct: 279 DVVTWTTLINGYILNGDARSALMLCGMMQCEG-VKPNSVSIASLLSACGSLVYLNHGKCL 337
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A + + +V V ALI MY KC K+F ++ WN+++ GF +N +
Sbjct: 338 HAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNALLSGFIQNRLA 397
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ +L +M+ + PD T ++LP
Sbjct: 398 REAIELFKQML--VKDVQPDHATFNSLLP 424
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 109/210 (51%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL ACG + GK +H + + ++ I+ T LI MY+ C S +VF +
Sbjct: 321 LLSACGSLVYLNHGKCLHAW-AIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKK 379
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
WNAL+SGF +N L + + +F ++ +++PD+ TF ++ A +AD+ +
Sbjct: 380 RTAPWNALLSGFIQNRLAREAIELFKQMLVK-DVQPDHATFNSLLPAYAILADLQQAMNI 438
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV--MPERNLVSWNSIICGFSENG 280
H + G + + V++ L+ +Y KC + ++F + + +++++ W++II + ++G
Sbjct: 439 HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHG 498
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L +M+ + G P+ +T +VL
Sbjct: 499 HGKMAVKLFNQMV--QSGVKPNHVTFTSVL 526
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 127/244 (52%), Gaps = 9/244 (3%)
Query: 70 ITTLCEESKSLNKALSLLQ--ENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSAST 127
I LC + L KAL L + L + +E LL+ C ++ G RVH VS +
Sbjct: 66 ILELCLKG-DLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTV 124
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
+ N L++M+ G +++ VF + R+LF WN LV G+ K + + L+++
Sbjct: 125 TRLGVRLGNA-LLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLY 183
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+ ++PD +TFPCV++ CGG+ D+ G VH + G DV V NALI MY K
Sbjct: 184 HRMLW-VGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI-PDVITV 306
C + +F+ MP R+ +SWN++I G+ EN E L M E F+ PD++T+
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMM---REFFVDPDLMTM 299
Query: 307 VTVL 310
+V+
Sbjct: 300 TSVI 303
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 117/225 (52%), Gaps = 6/225 (2%)
Query: 86 LLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSL 145
+++E + DL T V+ AC D +G+ VH V T F + +N LI M+S
Sbjct: 286 MMREFFVDPDLMTMTSVI-SACEALGDERLGREVHGYV-IKTGFVAEVSVNNSLIQMHSS 343
Query: 146 CGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPC 205
G ++ VF ++ ++L W A++SG+ KN L + + + + + PD T
Sbjct: 344 VGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEG-VVPDEITIAS 402
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
V+ AC G+ + G +H A + GL V V+N+LI MY KC +++ +++F +P +N
Sbjct: 403 VLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKN 462
Query: 266 LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++SW SII G N S E+ +M+ P+ +T+V+VL
Sbjct: 463 VISWTSIILGLRLNYRSFEALFFFQQMI---LSLKPNSVTLVSVL 504
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 6/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC ++ G +HE T ++ I+ LI MYS C + VF + +
Sbjct: 403 VLSACAGLGLLDKGIMLHEFAD-RTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNK 461
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W +++ G N + L F ++ LKP++ T V+ AC I + G +
Sbjct: 462 NVISWTSIILGLRLNYRSFEALFFFQQMI--LSLKPNSVTLVSVLSACARIGALSCGKEI 519
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A + GL D F+ NAL+ MY +C +E F E+++ SWN ++ G+++ G
Sbjct: 520 HAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKG 578
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L KM+ E PD IT ++L
Sbjct: 579 GLAVELFHKMI--ESDVNPDEITFTSLL 604
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 72/161 (44%), Gaps = 4/161 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + GK +H + T D + L+ MY CG + F+S + +
Sbjct: 503 VLSACARIGALSCGKEIHAH-ALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-K 560
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG-SG 221
++ WN L++G+ + + +F ++ ++++ PD TF ++ AC V G
Sbjct: 561 DVASWNILLTGYAQQGKGGLAVELFHKMI-ESDVNPDEITFTSLLCACSRSGMVTDGLEY 619
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
M K + ++ +++ + G+ +E+ + + MP
Sbjct: 620 FESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMP 660
>gi|255553021|ref|XP_002517553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543185|gb|EEF44717.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 130/235 (55%), Gaps = 11/235 (4%)
Query: 78 KSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
+ LN L +L+ ++ + DL T V+ AC D +G+ +H V T + ND +++
Sbjct: 287 EGLNLFLQMLELSV-DPDLMTMTSVI-SACELLGDDRLGREIHGYV-VRTGYGNDVSVHS 343
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF--VELSSDTE 195
LI MY+ G+ ++ +VF + R++ W A++SG+ N ++ L + +EL+
Sbjct: 344 LLIQMYASLGYWKEAEKVFSETECRDVVSWTAMISGYEGNLMHDKALETYKNMELAG--- 400
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
+ PD T CV+ AC + + G +H +A +MGL+ V V+N+LI MY KC +++ +
Sbjct: 401 IVPDEITIACVLSACASLGQLDLGMRLHELANRMGLMSFVIVANSLIDMYSKCKCIDKAL 460
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F + ++N++SW SII G N S E+ KM + P+ IT+++VL
Sbjct: 461 EVFHCIQDKNVISWTSIILGLRINNRSFEALSFFRKM---KRNLKPNSITLISVL 512
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 109/208 (52%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L++ C +++ G V + V S + L++MY ++ VF + R
Sbjct: 107 LIRLCENKRGYTEGDYVFKAVLNSLVNPLSVRLGNALLSMYVRFSDLNNAWNVFGRMGER 166
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NLF WN LV G+ K + + L ++ + +KPD +TFPCV+++CGG D G +
Sbjct: 167 NLFSWNVLVGGYAKAGFFDEALCLYHRMLW-VGIKPDIYTFPCVLRSCGGANDFIRGKEI 225
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G DV NALI MY KC V +F+ M +R+ +SWN++I G+ ENG
Sbjct: 226 HCHVIRFGFETDVSAVNALITMYVKCGCVGSARTVFDKMLQRDRISWNAMISGYFENGEC 285
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E +L ++M+ E PD++T+ +V+
Sbjct: 286 VEGLNLFLQML--ELSVDPDLMTMTSVI 311
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 106/208 (50%), Gaps = 6/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +++G R+HEL + S + N+ LI MYS C + VF ++ +
Sbjct: 411 VLSACASLGQLDLGMRLHELANRMGLMSFVIVANS-LIDMYSKCKCIDKALEVFHCIQDK 469
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W +++ G N + LS F ++ + LKP++ T V+ AC I + G +
Sbjct: 470 NVISWTSIILGLRINNRSFEALSFFRKMKRN--LKPNSITLISVLSACARIGALMCGKEI 527
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K ++ + F+ NA++ MY +C + + F + E ++ +WN ++ G++E G
Sbjct: 528 HAHALKTAMVYEGFLPNAILDMYVRCGKLGLALNQFNLYKE-DVAAWNILMRGYAEQGQG 586
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L KM+ E PD +T + +L
Sbjct: 587 AMAVELFHKMI--ESKVNPDDVTYIALL 612
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 104/200 (52%), Gaps = 9/200 (4%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSAST------QFSNDFIINTRLITMYSLCGFPLDSRR 154
L+ AC + + G+RVH + AS+ Q + + ++ LITMY C P +R+
Sbjct: 48 AALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQ 107
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE-LSSDTELKPDNFTFPCVIKACGGI 213
VFD + RN W ++++ +N D L +F L S T D F ++AC +
Sbjct: 108 VFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGT--AADQFALGSAVRACTEL 165
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
DVG G VH A K D+ V NAL+ MY K V++ LFE + +++L+SW SII
Sbjct: 166 GDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSII 225
Query: 274 CGFSENGFSCESFDLLIKMM 293
GF++ GF E+ + +M+
Sbjct: 226 AGFAQQGFEMEALQVFREMI 245
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 3/212 (1%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A G ++AC D+ G++VH S + S D I+ L+TMYS G D +F+
Sbjct: 154 ALGSAVRACTELGDVGTGRQVHAHALKSERGS-DLIVQNALVTMYSKNGLVDDGFMLFER 212
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+K ++L W ++++GF + + L +F E+ + P+ F F +ACG + +
Sbjct: 213 IKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEY 272
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G +HG++ K L D++V +L MY +C ++ F + +LVSWNSI+ +S
Sbjct: 273 GEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSV 332
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ L +M + G PD ITV +L
Sbjct: 333 EGLLSEALVLFSEMR--DSGLRPDGITVRGLL 362
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 102/190 (53%), Gaps = 4/190 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV-FDSL 159
G +ACG E G+++H L S + D + L MY+ C LDS RV F +
Sbjct: 258 GSAFRACGAVGSWEYGEQIHGL-SIKYRLDRDLYVGCSLSDMYARCK-NLDSARVAFYRI 315
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+ +L WN++V+ ++ L ++ L +F E+ D+ L+PD T ++ AC G + G
Sbjct: 316 EAPDLVSWNSIVNAYSVEGLLSEALVLFSEMR-DSGLRPDGITVRGLLCACVGRDALYHG 374
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H K+GL GDV V N+L++MY +C+ + + +F + ++++V+WNSI+ +++
Sbjct: 375 RLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQH 434
Query: 280 GFSCESFDLL 289
E L
Sbjct: 435 NHPEEVLKLF 444
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + G+ +H + D + L++MY+ C + VF +K +
Sbjct: 361 LLCACVGRDALYHGRLIHSYL-VKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQ 419
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN++++ ++ +VL +F L + +E D + V+ A + V
Sbjct: 420 DVVTWNSILTACAQHNHPEEVLKLF-SLLNKSEPSLDRISLNNVLSASAELGYFEMVKQV 478
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENGF 281
H A K GL+ D +SN LI Y KC +++ ++LFE+M R++ SW+S+I G+++ G+
Sbjct: 479 HAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGY 538
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+FDL +M G P+ +T + VL
Sbjct: 539 AKEAFDLFSRMRSL--GIRPNHVTFIGVL 565
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 203 FPCVIKACGGIADVGFGSGVH-------GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
+ ++ AC + + G VH + L G+ + N LI MYG+CA +
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
++F+ MP RN VSW S+I +NG + ++ L M+
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSML 144
>gi|15218851|ref|NP_171853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180299|sp|Q9LR69.1|PPR8_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g03540
gi|9280645|gb|AAF86514.1|AC002560_7 F21B7.16 [Arabidopsis thaliana]
gi|91805735|gb|ABE65596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189463|gb|AEE27584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 609
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 117/210 (55%), Gaps = 8/210 (3%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L ACG+ + ++ GK +H + + SN ++ + L+ MY CG ++R+VF+ +
Sbjct: 269 GTVLTACGNLRRLKQGKEIHGKLITNGIGSN-VVVESSLLDMYGKCGSVREARQVFNGMS 327
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+N W+AL+ G+ +N + + IF E+ + D + F V+KAC G+A V G
Sbjct: 328 KKNSVSWSALLGGYCQNGEHEKAIEIFREME-----EKDLYCFGTVLKACAGLAAVRLGK 382
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG + G G+V V +ALI +YGK ++ +++ M RN+++WN+++ ++NG
Sbjct: 383 EIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNG 442
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ M+ ++G PD I+ + +L
Sbjct: 443 RGEEAVSFFNDMV--KKGIKPDYISFIAIL 470
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 107/189 (56%), Gaps = 1/189 (0%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
++AC ++ +G+ H +V N FI +T L +Y + P+D+RRVFD + +
Sbjct: 170 VKACSELGEVRLGRCFHGVVITHGFEWNHFISST-LAYLYGVNREPVDARRVFDEMPEPD 228
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W A++S F+KN+LY + L +F + L PD TF V+ ACG + + G +H
Sbjct: 229 VICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIH 288
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G G+ +V V ++L+ MYGKC V E ++F M ++N VSW++++ G+ +NG
Sbjct: 289 GKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHE 348
Query: 284 ESFDLLIKM 292
++ ++ +M
Sbjct: 349 KAIEIFREM 357
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 129/274 (47%), Gaps = 10/274 (3%)
Query: 40 LRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEA 99
L+ F + +SL L+ ++++ + E+ L + L +A+ +L H++++
Sbjct: 6 LKRHFSQHASLCLTPSISSSAPTKQSRILELCKLGQ----LTEAIRILNST-HSSEIPAT 60
Query: 100 TGV---LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
+ LLQ C G + H V S ++ + N+ L + L ++RRVF
Sbjct: 61 PKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVF 120
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
D ++ W +++SG+ + + L +FVE+ S L + FT +KAC + +V
Sbjct: 121 DGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVS-FGLDANEFTLSSAVKACSELGEV 179
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G HG+ G + F+S+ L +YG + ++F+ MPE +++ W +++ F
Sbjct: 180 RLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAF 239
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S+N E+ L M +G +PD T TVL
Sbjct: 240 SKNDLYEEALGLFYAMHR-GKGLVPDGSTFGTVL 272
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 7/196 (3%)
Query: 82 KALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLIT 141
KA+ + +E + DL G +L+AC + +GK +H F N I+ + LI
Sbjct: 349 KAIEIFRE-MEEKDLY-CFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGN-VIVESALID 405
Query: 142 MYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF 201
+Y G + RV+ + RN+ WNA++S +N + +S F ++ +KPD
Sbjct: 406 LYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKG-IKPDYI 464
Query: 202 TFPCVIKACG--GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
+F ++ ACG G+ D G V MA G+ + +I + G+ EE L E
Sbjct: 465 SFIAILTACGHTGMVDEGRNYFVL-MAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLE 523
Query: 260 VMPERNLVSWNSIICG 275
RN S ++ G
Sbjct: 524 RAECRNDASLWGVLLG 539
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 127/244 (52%), Gaps = 9/244 (3%)
Query: 70 ITTLCEESKSLNKALSLLQ--ENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSAST 127
I LC + L KAL L + L + +E LL+ C ++ G RVH VS +
Sbjct: 66 ILELCLKG-DLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTV 124
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
+ N L++M+ G +++ VF + R+LF WN LV G+ K + + L+++
Sbjct: 125 TRLGVRLGNA-LLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLY 183
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+ ++PD +TFPCV++ CGG+ D+ G VH + G DV V NALI MY K
Sbjct: 184 HRMLW-VGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI-PDVITV 306
C + +F+ MP R+ +SWN++I G+ EN E L M E F+ PD++T+
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMM---REFFVDPDLMTM 299
Query: 307 VTVL 310
+V+
Sbjct: 300 TSVI 303
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 117/225 (52%), Gaps = 6/225 (2%)
Query: 86 LLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSL 145
+++E + DL T V+ AC D +G+ VH V T F + +N LI M+S
Sbjct: 286 MMREFFVDPDLMTMTSVI-SACEALGDERLGREVHGYV-IKTGFVAEVSVNNSLIQMHSS 343
Query: 146 CGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPC 205
G ++ VF ++ ++L W A++SG+ KN L + + + + + PD T
Sbjct: 344 VGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEG-VVPDEITIAS 402
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
V+ AC G+ + G +H A + GL V V+N+LI MY KC +++ +++F +P +N
Sbjct: 403 VLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKN 462
Query: 266 LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++SW SII G N S E+ +M+ P+ +T+V+VL
Sbjct: 463 VISWTSIILGLRLNYRSFEALFFFQQMI---LSLKPNSVTLVSVL 504
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 6/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC ++ G +HE T ++ I+ LI MYS C + VF + +
Sbjct: 403 VLSACAGLGLLDKGIMLHEFAD-RTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNK 461
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W +++ G N + L F ++ LKP++ T V+ AC I + G +
Sbjct: 462 NVISWTSIILGLRLNYRSFEALFFFQQMI--LSLKPNSVTLVSVLSACARIGALSCGKEI 519
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A + GL D F+ NAL+ MY +C +E F E+++ SWN ++ G+++ G
Sbjct: 520 HAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKG 578
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L KM+ E PD IT ++L
Sbjct: 579 GLAVELFHKMI--ESDVNPDEITFTSLL 604
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 72/161 (44%), Gaps = 4/161 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + GK +H + T D + L+ MY CG + F+S + +
Sbjct: 503 VLSACARIGALSCGKEIHAH-ALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-K 560
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG-SG 221
++ WN L++G+ + + +F ++ ++++ PD TF ++ AC V G
Sbjct: 561 DVASWNILLTGYAQQGKGGLAVELFHKMI-ESDVNPDEITFTSLLCACSRSGMVTDGLEY 619
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
M K + ++ +++ + G+ +E+ + + MP
Sbjct: 620 FESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMP 660
>gi|255569195|ref|XP_002525566.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535145|gb|EEF36825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 563
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 129/237 (54%), Gaps = 10/237 (4%)
Query: 75 EESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFI 134
EE+K L K ++ E L D+ +L AC D+E GK VH+LV SN +
Sbjct: 326 EEAKVLFK--KMMDEGLQPTDVTVME--VLHACADSGDLEQGKFVHKLVEDLKLDSNVSV 381
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+N+ LI+MYS C + +F++L+ R L WNA++ G+ +N + L+ F E+ S
Sbjct: 382 MNS-LISMYSKCKQVDFAANLFENLQNRTLVSWNAMILGYAQNGRLNEALNFFCEMQSQ- 439
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+KPD+FT VI A ++ +HG+ + L VFV AL+ MY KC +
Sbjct: 440 NIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRLLDDTVFVMTALVDMYAKCGAIHTA 499
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI-PDVITVVTVL 310
KLF +M ER++++WNS+I + +G E+ L ++M ++G I P+ +T + VL
Sbjct: 500 RKLFNMMSERHVITWNSMIDAYGTHGLGKEAVQLFVEM---QKGTIKPNDVTFLCVL 553
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 119/217 (54%), Gaps = 11/217 (5%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQ--FSNDFIINTRLITMYSLCGFPLDSRR 154
K T VLL+ C K++ H+++ + + F ++ + T+LI+++ G ++ R
Sbjct: 44 KHPTAVLLELCTSVKEL------HQIIPSIIKNGFYSEELFQTKLISLFCNYGSLTEAAR 97
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VF+ ++ + ++ ++ GF KN L F + D ++P + F ++ CG
Sbjct: 98 VFEPIENKLEALYHTMLKGFAKNSSLDSALLFFCRMKHD-NVRPVVYNFTYLLTLCGDNF 156
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
D+ G +HG G ++F A++++Y KC + + K+F+ M ER+LV WN+II
Sbjct: 157 DLRRGKEIHGQLITSGFSWNLFAMTAVVSLYCKCRVIGDAYKMFDRMTERDLVCWNTIIS 216
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G+++NG + + +L+ K+ EEG PD +T+V+VLP
Sbjct: 217 GYAQNGLTKVALELVPKIF--EEGHRPDSVTIVSVLP 251
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 110/209 (52%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL CG D+ GK +H +L+++ FS + T ++++Y C D+ ++FD +
Sbjct: 148 LLTLCGDNFDLRRGKEIHGQLITSG--FSWNLFAMTAVVSLYCKCRVIGDAYKMFDRMTE 205
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R+L WN ++SG+ +N L L + ++ + +PD+ T V+ A I + FG
Sbjct: 206 RDLVCWNTIISGYAQNGLTKVALELVPKIFEEGH-RPDSVTIVSVLPAVADIRSLRFGKA 264
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H + G V +S AL+ MY KC + +F+ M R +V+WNS+I G ENG
Sbjct: 265 IHAYVIRAGFDWLVNISTALVDMYSKCDSLGTARVIFDGMGSRTVVTWNSMIAGCVENGD 324
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L KMM +EG P +TV+ VL
Sbjct: 325 PEEAKVLFKKMM--DEGLQPTDVTVMEVL 351
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 112/211 (53%), Gaps = 8/211 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN--TRLITMYSLCGFPLDSRRVFDSLK 160
+L A + + GK +H V + D+++N T L+ MYS C +R +FD +
Sbjct: 249 VLPAVADIRSLRFGKAIHAYV---IRAGFDWLVNISTALVDMYSKCDSLGTARVIFDGMG 305
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+R + WN++++G +N + +F ++ D L+P + T V+ AC D+ G
Sbjct: 306 SRTVVTWNSMIAGCVENGDPEEAKVLFKKMM-DEGLQPTDVTVMEVLHACADSGDLEQGK 364
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH + + L +V V N+LI+MY KC V+ LFE + R LVSWN++I G+++NG
Sbjct: 365 FVHKLVEDLKLDSNVSVMNSLISMYSKCKQVDFAANLFENLQNRTLVSWNAMILGYAQNG 424
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ + +M + PD T+V+V+P
Sbjct: 425 RLNEALNFFCEMQ--SQNIKPDSFTMVSVIP 453
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 74/138 (53%), Gaps = 6/138 (4%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEI---GKRVHELVSASTQFSND 132
++ LN+AL+ E + + ++K + ++ ++ I K +H LV
Sbjct: 422 QNGRLNEALNFFCE-MQSQNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRLLDDTV 480
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
F++ T L+ MY+ CG +R++F+ + R++ WN+++ + + L + + +FVE+
Sbjct: 481 FVM-TALVDMYAKCGAIHTARKLFNMMSERHVITWNSMIDAYGTHGLGKEAVQLFVEMQK 539
Query: 193 DTELKPDNFTFPCVIKAC 210
T +KP++ TF CV+ AC
Sbjct: 540 GT-IKPNDVTFLCVLSAC 556
>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 111/197 (56%), Gaps = 6/197 (3%)
Query: 116 GKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
GK VH EL Q ++ I + L+T+YS CG D+ VF S++ +++ W +L+SG
Sbjct: 392 GKSVHAELFKRPIQSTS--TIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGL 449
Query: 175 TKNELYTDVLSIFVELSSDTE-LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
KN + + L +F ++ D + LKPD+ V AC G+ + FG VHG K GL+
Sbjct: 450 CKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVL 509
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
+VFV ++LI +Y KC E +K+F M N+V+WNS+I +S N S DL M+
Sbjct: 510 NVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLML 569
Query: 294 GCEEGFIPDVITVVTVL 310
+G PD +++ +VL
Sbjct: 570 --SQGIFPDSVSITSVL 584
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 124/245 (50%), Gaps = 9/245 (3%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNAD-LKEATGVLL---QACGHEKDIEIGKRVHELVSA 125
I+ LC+ K +AL + + + D LK + ++ AC + + G +VH +
Sbjct: 446 ISGLCKNGK-FKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIK 504
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
+ N F+ + LI +YS CG P + +VF S+ T N+ WN+++S +++N L +
Sbjct: 505 TGLVLNVFV-GSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSID 563
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
+F L + PD+ + V+ A A + G +HG ++G+ D + NALI MY
Sbjct: 564 LF-NLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMY 622
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
KC F + +F+ M ++L++WN +I G+ +G + L +M E PD +T
Sbjct: 623 VKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGES--PDDVT 680
Query: 306 VVTVL 310
++++
Sbjct: 681 FLSLI 685
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 5/198 (2%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR-NLFQWNALVS 172
E GK++H + D + T LI MY G +D+ RVF ++ + N+ WN ++
Sbjct: 187 EEGKQIHGFM-LRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIV 245
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
GF + + L +++ L+ + +K + +F + AC + GFG +H KMGL
Sbjct: 246 GFGGSGICESSLDLYM-LAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLH 304
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
D +V +L++MY KC V E +F + ++ L WN+++ ++EN + + DL M
Sbjct: 305 NDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFM 364
Query: 293 MGCEEGFIPDVITVVTVL 310
++ +PD T+ V+
Sbjct: 365 R--QKSVLPDSFTLSNVI 380
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC ++ G+++H V ND + T L++MYS CG ++ VF + +
Sbjct: 279 LGACSQSENSGFGRQIHCDV-VKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKR 337
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L WNA+V+ + +N+ L +F + + L PD+FT VI C + +G VH
Sbjct: 338 LEIWNAMVAAYAENDYGYSALDLFGFMRQKSVL-PDSFTLSNVISCCSVLGLYNYGKSVH 396
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
K + + +AL+ +Y KC + +F+ M E+++V+W S+I G +NG
Sbjct: 397 AELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFK 456
Query: 284 ESFDLLIKMMGCEEGFIP--DVITVVT 308
E+ + M ++ P D++T VT
Sbjct: 457 EALKVFGDMKDDDDSLKPDSDIMTSVT 483
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD----- 157
LL+AC ++ GK +H V + D I T L+ MY CGF + +VFD
Sbjct: 66 LLKACSALTNLSYGKTIHGSVVV-LGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQS 124
Query: 158 --SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKA-CG-GI 213
+ R++ WN+++ G+ K + + + F + ++PD F+ V+ C G
Sbjct: 125 QSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLV-FGVRPDAFSLSIVVSVMCKEGN 183
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF-EVMPERNLVSWNSI 272
G +HG + L D F+ ALI MY K + ++F E+ + N+V WN +
Sbjct: 184 FRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVM 243
Query: 273 ICGFSENGFSCESFDLLI 290
I GF +G S DL +
Sbjct: 244 IVGFGGSGICESSLDLYM 261
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 168 NALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAA 227
N+ + + Y L ++ + + FTFP ++KAC + ++ +G +HG
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87
Query: 228 KMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE-------RNLVSWNSIICGF 276
+G D F++ +L+ MY KC F++ V++F+ + R++ WNS+I G+
Sbjct: 88 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGY 143
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 116/216 (53%), Gaps = 5/216 (2%)
Query: 95 DLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRR 154
D+ +GV AC K G +VH L S F D + ++ +Y C +++
Sbjct: 337 DVVSLSGVF-SACAEVKGYLQGLQVHCLAIKSG-FDVDVCVRNAILDLYGKCKALVEAYL 394
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VF ++ R+ WNA+++ +NE Y D ++ E+ ++PD+FT+ V+KAC G+
Sbjct: 395 VFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLR-YGMEPDDFTYGSVLKACAGLQ 453
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+ +GS VHG A K GL D FVS+ ++ MY KC + E KL + + + LVSWNSII
Sbjct: 454 SLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIIS 513
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
GFS N S E+ +M+ + G PD T TVL
Sbjct: 514 GFSLNKQSEEAQKFFSEML--DIGVKPDHFTYATVL 547
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 117/210 (55%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L+AC + +E G VH + + D +++ ++ MY CG +++++ D +
Sbjct: 443 GSVLKACAGLQSLEYGSVVHG-KAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIG 501
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ L WN+++SGF+ N+ + F E+ D +KPD+FT+ V+ C +A + G
Sbjct: 502 GQELVSWNSIISGFSLNKQSEEAQKFFSEML-DIGVKPDHFTYATVLDTCANLATIELGK 560
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG K ++GD ++S+ L+ MY KC + + + +FE + + VSWN++ICG++ +G
Sbjct: 561 QIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHG 620
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ ++ +M + +P+ T V VL
Sbjct: 621 QGFEALEMFERMQ--QANVVPNHATFVAVL 648
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 33/211 (15%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN--------- 163
+ G+ H + S F+ N L+ MY+ CG +R VFD + R+
Sbjct: 20 LATGQAAHARMLVSGFMPTTFVSNC-LLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLT 78
Query: 164 ----------------------LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF 201
+ WNAL+SG+ + ++ D + + VE++ + PD
Sbjct: 79 AYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRG-VAPDRT 137
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
T ++KACGG+ D+ G +H +A K GL DV +AL+ MYGKC +E+ ++ F M
Sbjct: 138 TLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGM 197
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKM 292
ERN VSW + I G +N +L ++M
Sbjct: 198 GERNSVSWGAAIAGCVQNEQYTRGLELFVQM 228
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 4/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
VLL+ACG +D+ +G ++H V+ T D + L+ MY C D+ R F +
Sbjct: 141 VLLKACGGLEDLALGVQIHA-VAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGE 199
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
RN W A ++G +NE YT L +FV++ L + V ++C I +
Sbjct: 200 RNSVSWGAAIAGCVQNEQYTRGLELFVQMQR-LGLGVSQPAYASVFRSCAAITCLSTARQ 258
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H A K D V A++ +Y K + + + F +P + + N+++ G G
Sbjct: 259 LHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGL 318
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M GF DV+++ V
Sbjct: 319 GAEALQLFQFMTRSGIGF--DVVSLSGVF 345
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 8/106 (7%)
Query: 202 TFPCVIKACGGIADVGFGSG--VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
TF + + C G +G H G + FVSN L+ MY +C +F+
Sbjct: 4 TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63
Query: 260 VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
VMP R+ VSWN+++ ++ G + + L M PDV++
Sbjct: 64 VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPD------PDVVS 103
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 123/208 (59%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C +KD+ K+VH+ + S N ++N L+ +Y CG ++R VFD+L +
Sbjct: 34 VLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNN-LLHVYIECGRLQEARCVFDALVKK 92
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA+++G+ +++ D + +F E+ + ++P+ T+ ++KAC ++ + +G V
Sbjct: 93 SGASWNAMIAGYVEHKHAEDAMRLFREMCHEG-VQPNAGTYMIILKACASLSALKWGKEV 151
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H GL DV V AL+ MYGKC + E ++F+ + +++SW +I ++++G
Sbjct: 152 HACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNG 211
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E++ L+++M +EGF P+ IT V++L
Sbjct: 212 KEAYRLMLQME--QEGFKPNAITYVSIL 237
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 118/237 (49%), Gaps = 6/237 (2%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATG--VLLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
E K A+ L +E H A ++L+AC ++ GK VH + +D
Sbjct: 106 EHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGG-LESDV 164
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
+ T L+ MY CG ++RR+FD+L ++ W ++ + ++ + + +++ +
Sbjct: 165 RVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQE 224
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
KP+ T+ ++ AC + + VH A GL DV V AL+ MY K +++
Sbjct: 225 G-FKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDD 283
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ M R++VSWN +I F+E+G E++DL ++M EG PD I +++L
Sbjct: 284 ARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQ--TEGCKPDAIMFLSIL 338
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC E ++ KRVH + D + T L+ MY+ G D+R VFD +K R
Sbjct: 236 ILNACASEGALKWVKRVHRH-ALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVR 294
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN ++ F ++ + +F+++ ++ KPD F ++ AC + + +
Sbjct: 295 DVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEG-CKPDAIMFLSILNACASAGALEWVKKI 353
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A GL DV V AL+ MY K +++ +F+ M RN+VSWN++I G +++G
Sbjct: 354 HRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLG 413
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ ++ +M G PD +T V VL
Sbjct: 414 QDALEVFRRMTA--HGVKPDRVTFVAVL 439
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 6/158 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E K++H + + D + T L+ MYS G D+R VFD +K R
Sbjct: 337 ILNACASAGALEWVKKIHRH-ALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVR 395
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
N+ WNA++SG ++ L D L +F +++ +KPD TF V+ AC G+ D G S
Sbjct: 396 NVVSWNAMISGLAQHGLGQDALEVFRRMTAHG-VKPDRVTFVAVLSACSHAGLVDEGR-S 453
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
M G+ DV N ++ + G+ + E KLF
Sbjct: 454 QYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLME-AKLF 490
>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 119/209 (56%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C + K + K VH+ + + +D ++ LI +Y C +R VF+++ R
Sbjct: 9 LLRECTNTKSLRQAKLVHQRI-LTVGLRSDVVLCKSLINVYFACKDHCSARLVFENIDIR 67
Query: 163 -NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+++ WN+LVSG++KN ++ D L +F L + PD+FT+P VIKA G + G
Sbjct: 68 SDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRM 127
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H + K G + DV V+++L+ MY K E+ V++F+ MPER++ SWN++I F + G
Sbjct: 128 IHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGD 187
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ +L +M F P+ +++ +
Sbjct: 188 AEKALELFGRME--RSDFEPNSVSITVAI 214
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 103/196 (52%), Gaps = 4/196 (2%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
+G+ +H +V S D ++ + L+ MY+ DS +VFD + R++ WN ++S F
Sbjct: 124 LGRMIHTVVVKSGHVC-DVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSF 182
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
+ L +F + ++ +P++ + I AC + + G +H K D
Sbjct: 183 YQRGDAEKALELFGRMER-SDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELD 241
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
+V++AL+ MYG+C F+E ++F+ M ++LV+WNS+I G+ G S +LL +M+
Sbjct: 242 EYVNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMI- 300
Query: 295 CEEGFIPDVITVVTVL 310
EG P T+ ++L
Sbjct: 301 -IEGTRPSQTTLTSIL 315
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 10/211 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +++ GK VH V S D IN LI +Y CG + VF +
Sbjct: 314 ILMACSRSRNLLHGKFVHGYVIRSV-VDADIYINCSLIDLYFKCGEVKLAETVFLKTQKD 372
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN ++SG+ + + ++ ++ S ++PD TF V+ C +A + G +
Sbjct: 373 VVESWNVMISGYVSVGNWFKAVDVYDQMVS-VGVQPDIVTFTSVLSTCSQLAALEKGKQI 431
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H ++ L D + +AL+ MY KC V+E ++F +P++++VSW +I + +G
Sbjct: 432 HLSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMISAYGSHGQP 491
Query: 283 CES---FDLLIKMMGCEEGFIPDVITVVTVL 310
E+ FD + K G PD +T + VL
Sbjct: 492 REALYHFDEMQKF-----GVKPDGVTFLAVL 517
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 4/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V + AC +E GK +H +F D +N+ L+ MY C F +R VF ++
Sbjct: 212 VAISACSRLLCLERGKEIHRKY-LKKEFELDEYVNSALVDMYGRCDFLEMAREVFQQMRR 270
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++L WN+++ G+ + + + + +P T ++ AC ++ G
Sbjct: 271 KSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGT-RPSQTTLTSILMACSRSRNLLHGKF 329
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VHG + + D++++ +LI +Y KC V+ +F + + SWN +I G+ G
Sbjct: 330 VHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSVGN 389
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ D+ +M+ G PD++T +VL
Sbjct: 390 WFKAVDVYDQMVSV--GVQPDIVTFTSVL 416
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 5/163 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C +E GK++H +S S + D ++ + L+ MYS CG ++ R+F+S+ +
Sbjct: 415 VLSTCSQLAALEKGKQIHLSISES-RLETDELLLSALLDMYSKCGNVKEASRIFNSIPKK 473
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGS 220
++ W ++S + + + L F E+ +KPD TF V+ ACG G+ D G
Sbjct: 474 DVVSWTVMISAYGSHGQPREALYHFDEMQK-FGVKPDGVTFLAVLSACGHAGLIDEGVKY 532
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 263
M +K G+ + + LI + G+ + E + + PE
Sbjct: 533 -FSQMRSKYGIEASIEQYSCLIDILGRAGRLLEAYGILQQKPE 574
>gi|302784186|ref|XP_002973865.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
gi|300158197|gb|EFJ24820.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
Length = 616
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 125/233 (53%), Gaps = 11/233 (4%)
Query: 80 LNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
L+ AL + + D A G LL+ CG ++ GK++HE V + + N ++ N L
Sbjct: 54 LDNALVWIDSH-QQEDCAPAYGNLLRDCG---ELAAGKKIHEHVVKNGYYENVYVGN-HL 108
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
+ MYS CG D+++VFD ++ R+ W+ +++G+ ++ L + + ++ ++ D PD
Sbjct: 109 VQMYSKCGSLEDAKKVFDGMRRRDSISWSKMIAGYVRHGLAREAIKLYKAMAID----PD 164
Query: 200 NFTFPCVIKACGGIADVGF--GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
FTF V+ AC + G +H ++ L DVFV +AL+ M+ KC ++E ++
Sbjct: 165 GFTFSAVLNACSSLGPRALEVGKEIHAHMKRIWLKPDVFVDSALVTMFAKCGSLKESREV 224
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ ++++ WNS+I +S++G E+ +L M P+ IT TVL
Sbjct: 225 FDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPNAITYTTVL 277
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 104/191 (54%), Gaps = 4/191 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L AC +D+E GK VH ++V A QF D L+ MY+ CG ++R VFD +K
Sbjct: 276 VLAACSAVEDLEQGKEVHRQMVDAGFQF--DAAAENSLVNMYAKCGSITEAREVFDGMKQ 333
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R + W ++S + + + L ++ ++ S+ ++P+ TF V+ AC + + G
Sbjct: 334 RTVVSWTGIISAYVRKGHPREALDLYRKMGSEG-VEPNGITFASVLSACSSLGALEEGKA 392
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH G D+ V+NAL+++YGKC V+ K+F+ M RN+VSW ++I ++ +
Sbjct: 393 VHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRMKIRNVVSWTAMISAYAHHRH 452
Query: 282 SCESFDLLIKM 292
S E+ L M
Sbjct: 453 SEEAIQLYKAM 463
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 6/212 (2%)
Query: 102 VLLQACGH--EKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
+L AC + +E+GK +H + D +++ L+TM++ CG +SR VFD
Sbjct: 170 AVLNACSSLGPRALEVGKEIHAHMK-RIWLKPDVFVDSALVTMFAKCGSLKESREVFDDC 228
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVEL-SSDTELKPDNFTFPCVIKACGGIADVGF 218
+ +++ WN+++ ++++ + + +F + SS ++P+ T+ V+ AC + D+
Sbjct: 229 RWKDVLFWNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQ 288
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G VH G D N+L+ MY KC + E ++F+ M +R +VSW II +
Sbjct: 289 GKEVHRQMVDAGFQFDAAAENSLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVR 348
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ DL KM EG P+ IT +VL
Sbjct: 349 KGHPREALDLYRKM--GSEGVEPNGITFASVL 378
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 14/179 (7%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E GK VH + A+ + D + L+++Y CG +R+VFD +K R
Sbjct: 377 VLSACSSLGALEEGKAVHAQMKAAG-YKPDLAVANALVSLYGKCGSVDSARKVFDRMKIR 435
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTE-LKPDNFTFPCVIKAC--GGIADVG-- 217
N+ W A++S + + + + ++ + D E ++ +F + V+ AC G+ +
Sbjct: 436 NVVSWTAMISAYAHHRHSEEAIQLYKAM--DLEGVQASSFIYGTVLTACSQAGLLESARH 493
Query: 218 -FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIIC 274
FG A L V ++ L G+ + E +L VMP E V+W ++
Sbjct: 494 YFGCLTRDCGAPAKLEDYVCMATVL----GRAGRLAEAEELLAVMPFEAEFVAWMGLLA 548
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 112/205 (54%), Gaps = 4/205 (1%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC K + G ++H V S ++ D I L+ +Y+ CG ++ +F ++ ++
Sbjct: 456 ACAGIKAMRQGLQIHARVYVSG-YAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEI 514
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
WN L+SGF ++ LY L +F+++ K + FTF I A +AD+ G VHG
Sbjct: 515 TWNGLISGFGQSRLYKQALMVFMKMGQ-AGAKYNVFTFISAISALANLADIKQGKQVHGR 573
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
A K G + V+NALI++YGKC +E+ +F M RN VSWN+II S++G E+
Sbjct: 574 AVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEA 633
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
DL +M +EG P+ +T + VL
Sbjct: 634 LDLFDQMK--QEGLKPNDVTFIGVL 656
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 107/208 (51%), Gaps = 6/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL AC D++ GK++H L+ A F D+I L+ +Y CG + +F+
Sbjct: 251 LLAACASVGDLQKGKQLHSYLLKAGMSF--DYITEGSLLDLYVKCGDIETAHDIFNLGDR 308
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
N+ WN ++ + + IF ++ + T + P+ FT+PC+++ C + G
Sbjct: 309 TNVVLWNLMLVAYGQISDLAKSFEIFGQMQA-TGIHPNQFTYPCILRTCTCTGQIELGEQ 367
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H ++ K G D++VS LI MY K +++ K+ E++ +R++VSW S+I G+ ++ F
Sbjct: 368 IHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDF 427
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTV 309
E+ +M C G PD I + +
Sbjct: 428 CEEALATFKEMQDC--GVWPDNIGLASA 453
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 103/204 (50%), Gaps = 11/204 (5%)
Query: 98 EATGV---------LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGF 148
+ATG+ +L+ C IE+G+++H L S F +D ++ LI MYS G
Sbjct: 338 QATGIHPNQFTYPCILRTCTCTGQIELGEQIHSL-SIKNGFESDMYVSGVLIDMYSKYGC 396
Query: 149 PLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIK 208
+R++ + L+ R++ W ++++G+ +++ + L+ F E+ D + PDN
Sbjct: 397 LDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQ-DCGVWPDNIGLASAAS 455
Query: 209 ACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS 268
AC GI + G +H G D+ + N L+ +Y +C EE LF + ++ ++
Sbjct: 456 ACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEIT 515
Query: 269 WNSIICGFSENGFSCESFDLLIKM 292
WN +I GF ++ ++ + +KM
Sbjct: 516 WNGLISGFGQSRLYKQALMVFMKM 539
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 106/237 (44%), Gaps = 9/237 (3%)
Query: 75 EESKSLNKALSLLQENLHNADLKEATGVLLQAC-GHEKDIEIGKRVHELVSASTQFSNDF 133
E+ SL A + L +ADL A LQAC G + +H S D
Sbjct: 24 EKILSLVAAKASHHRALGSADLTCA----LQACRGRGNRWPLVLEIHA-TSVVRGLGADR 78
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
+I LI +Y+ G +R+VF L +R+ W A++SG+ ++ L + ++ ++
Sbjct: 79 LIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHW- 137
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
T + P + V+ AC G +H K + FV NALIA+Y +
Sbjct: 138 TAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKL 197
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F M + V++N++I G ++ G + + +M G PD +TV ++L
Sbjct: 198 AERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQ--LSGLRPDCVTVASLL 252
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC K G+ +H V S F+ N LI +Y G + RVF +
Sbjct: 150 VLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNA-LIALYLGFGSFKLAERVFCDMLFC 208
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ +N L+SG + L IF E+ + L+PD T ++ AC + D+ G +
Sbjct: 209 DRVTFNTLISGHAQCGHGECALQIFDEMQL-SGLRPDCVTVASLLAACASVGDLQKGKQL 267
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G+ D +L+ +Y KC +E +F + N+V WN ++ + +
Sbjct: 268 HSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDL 327
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+SF++ +M G P+ T +L
Sbjct: 328 AKSFEIFGQMQA--TGIHPNQFTYPCIL 353
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
DI+ GK+VH + S + N LI++Y CG D++ +F + RN WN ++
Sbjct: 563 DIKQGKQVHGRAVKTGHTSETEVANA-LISLYGKCGSIEDAKMIFSEMSLRNEVSWNTII 621
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG-SGVHGMAAKMG 230
+ +++ + L +F ++ + LKP++ TF V+ AC + V G S M+ G
Sbjct: 622 TSCSQHGRGLEALDLFDQMKQEG-LKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYG 680
Query: 231 L--IGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
L I D + ++ + G+ ++ + + MP N + W +++
Sbjct: 681 LNPIPDHYA--CVVDILGRAGQLDRARRFVDEMPITANAMIWRTLL 724
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +C D+ G++VH + + N+F+ T LI MY+ C + D+ F+ L R
Sbjct: 522 ILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVC-TALIDMYAKCMYLEDADVAFNRLSVR 580
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+LF W +++ + + L+ F ++ + +KP+ FT + C +A + G +
Sbjct: 581 DLFTWTVIITNYAQTNQGEKALNYFRQMQQEG-VKPNEFTLAGCLSGCSSLASLEGGQQL 639
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H M K G + D+FV +AL+ MY KC +EE LFE + R+ ++WN+IICG+++NG
Sbjct: 640 HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQG 699
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ M+ +EG PD +T +L
Sbjct: 700 NKALTAFRMML--DEGISPDGVTFTGIL 725
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 111/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C + K+++ G+ +H L+ N+FI L+ MYS CG +D+ VF ++K
Sbjct: 320 VLKGCANSKNLKQGQVIHSLIIKCGYEGNEFI-GCGLVDMYSKCGLAIDAIGVFKTIKKP 378
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+AL++ + + + +F L + P+ +T ++ A ++ +G +
Sbjct: 379 DIVVWSALITCLDQQGQSEESIKLF-HLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSI 437
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G DV VSNAL+ MY K V + KL+E M +R+L+SWN+ + G + G
Sbjct: 438 HACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMY 497
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ M+ EEGFIP++ T +++L
Sbjct: 498 DRPLTIFYHML--EEGFIPNMYTFISIL 523
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 2/191 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C ++ + + K +H L+ + D + L+ +Y+ C + +R V + R
Sbjct: 118 MLRECASKRSLGVAKAIHGLIVKDV-INPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDR 176
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W AL+ G D + +F E+ ++ + P+ FT +KAC + G +
Sbjct: 177 DVVSWTALIQGLVAEGFANDSIYLFQEMQNEG-IMPNEFTLATGLKACSLCMALDLGKQM 235
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K+GL+ D+FV +AL+ +Y KC +E K+F MPE+N V+WN ++ G+++ G
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDV 295
Query: 283 CESFDLLIKMM 293
L MM
Sbjct: 296 TGVLKLFCSMM 306
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL A + +++ G+ +H V F D ++ L+TMY G D ++++S+ R
Sbjct: 421 LLSAATNTGNLQYGQSIHACV-WKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDR 479
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WNA +SG +Y L+IF + + + P+ +TF ++ +C + DV +G V
Sbjct: 480 DLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFI-PNMYTFISILGSCSCLFDVHYGRQV 538
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K L + FV ALI MY KC ++E+ F + R+L +W II +++
Sbjct: 539 HAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQG 598
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ + +M +EG P+ T+ L
Sbjct: 599 EKALNYFRQMQ--QEGVKPNEFTLAGCL 624
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 107/212 (50%), Gaps = 6/212 (2%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
ATG L+AC +++GK++H + D + + L+ +Y+ CG + ++F
Sbjct: 217 ATG--LKACSLCMALDLGKQMHAQ-AFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIG 273
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ +N WN L++G+ + T VL +F + + ++K + FT V+K C ++
Sbjct: 274 MPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMM-ELDVKCNEFTLTTVLKGCANSKNLKQ 332
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G +H + K G G+ F+ L+ MY KC + + +F+ + + ++V W+++I +
Sbjct: 333 GQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQ 392
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G S ES L M + +P+ T+ ++L
Sbjct: 393 QGQSEESIKLFHLMRLGDT--LPNQYTICSLL 422
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 105/241 (43%), Gaps = 25/241 (10%)
Query: 36 NKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNAD 95
N+ S+R +F ++ A+TN QG K+LN + QE + +
Sbjct: 575 NRLSVRDLFTWTVIITNYAQTN----QG-------------EKALNYFRQMQQEGVKPNE 617
Query: 96 LKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV 155
A L C +E G+++H +V S S D + + L+ MY+ CG ++ +
Sbjct: 618 FTLAG--CLSGCSSLASLEGGQQLHSMVFKSGHVS-DMFVGSALVDMYAKCGCMEEAEAL 674
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GI 213
F++L R+ WN ++ G+ +N L+ F + D + PD TF ++ AC G+
Sbjct: 675 FEALIRRDTIAWNTIICGYAQNGQGNKALTAF-RMMLDEGISPDGVTFTGILSACSHQGL 733
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSI 272
+ G + M G+ V ++ + G+ +E+ + M +N + W ++
Sbjct: 734 VEEG-KEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETV 792
Query: 273 I 273
+
Sbjct: 793 L 793
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 203 FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ +++ C +G +HG+ K + D + +L+ +Y KC + + MP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 263 ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+R++VSW ++I G GF+ +S L +M EG +P+ T+ T L
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQ--NEGIMPNEFTLATGL 220
>gi|255582620|ref|XP_002532091.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528238|gb|EEF30293.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 446
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L +C + + G+ H LV F+ND IN LITMY+ C +R+VFD + R
Sbjct: 133 LFISCANLVALHCGQIAHSLV-LKMGFNNDSHINHSLITMYAKCSKLDSARKVFDEILER 191
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+++SG+TK + + +F+E+ + +P T ++ ACG + D+ G V
Sbjct: 192 DIVSWNSMISGYTKMGFAREAVRLFMEMR-EQGFEPVEMTLVSILGACGDLGDLALGKWV 250
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ + + + ++ALI MYGKC + ++F+ M E+++V+WN++I G+++NG S
Sbjct: 251 EALIGDKKMELNSYTASALIDMYGKCGDLMSARRVFDNMAEKDIVTWNAMITGYAQNGAS 310
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M E G P+ IT+V VL
Sbjct: 311 DEAMTLFNVMR--EAGITPNEITMVVVL 336
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 115/208 (55%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG D+ +GK V L+ N + + LI MY CG + +RRVFD++ +
Sbjct: 234 ILGACGDLGDLALGKWVEALIGDKKMELNSYTASA-LIDMYGKCGDLMSARRVFDNMAEK 292
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA+++G+ +N + +++F + + + P+ T V+ AC I + G V
Sbjct: 293 DIVTWNAMITGYAQNGASDEAMTLF-NVMREAGITPNEITMVVVLSACASIGALDLGKWV 351
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
A++ GL DV+V++AL+ MY KC ++ +++FE MP +N VSWN++I + +G +
Sbjct: 352 EMYASQRGLQHDVYVASALVDMYAKCGSLDNALRVFENMPHKNEVSWNAMISALAFHGRA 411
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M+ P+ IT + V
Sbjct: 412 REALSLFSRMLNGST-VRPNDITFIGVF 438
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 94/157 (59%), Gaps = 4/157 (2%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKN-ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
+F + N + +N ++ G T Y+ + ++ ++ S LKP+NFTFP + +C +
Sbjct: 82 LFTQMPNPNDYAFNVMIRGLTTTWRNYSLAIQLYYQMKS-LGLKPNNFTFPFLFISCANL 140
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
+ G H + KMG D ++++LI MY KC+ ++ K+F+ + ER++VSWNS+I
Sbjct: 141 VALHCGQIAHSLVLKMGFNNDSHINHSLITMYAKCSKLDSARKVFDEILERDIVSWNSMI 200
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G+++ GF+ E+ L ++M E+GF P +T+V++L
Sbjct: 201 SGYTKMGFAREAVRLFMEMR--EQGFEPVEMTLVSIL 235
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V+L AC +++GK V E+ ++ +D + + L+ MY+ CG ++ RVF+++
Sbjct: 334 VVLSACASIGALDLGKWV-EMYASQRGLQHDVYVASALVDMYAKCGSLDNALRVFENMPH 392
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
+N WNA++S + + LS+F + + + ++P++ TF V AC
Sbjct: 393 KNEVSWNAMISALAFHGRAREALSLFSRMLNGSTVRPNDITFIGVFAAC 441
>gi|147841473|emb|CAN62101.1| hypothetical protein VITISV_033310 [Vitis vinifera]
Length = 396
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 117/210 (55%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L C D+E+G R+ +L SN I++T ++ MY CG D R VFD +
Sbjct: 10 ATVLSICAKLGDLEMGLRIKKLXDNKNLGSN-MIVSTAMLEMYVKCGAVDDGRLVFDHMA 68
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ W+A+++G+ +N + L +F + S ++KP++ T V+ AC + V G
Sbjct: 69 RRDVVXWSAMIAGYAQNGRSNEALELFEXMKS-AQIKPNDVTLVSVLSACAQLGSVETGE 127
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+ GLI +V+V++AL+ MY KC + + ++F+ +P+R+ V+WNS+I G + NG
Sbjct: 128 RIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAING 187
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ ++ L +M E P+ IT V +L
Sbjct: 188 FAEDAIALYNRMKEIE--VKPNNITFVGLL 215
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 81 NKALSLLQENLHNADLK--EATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
N+AL L E + +A +K + T V +L AC +E G+R+ V + SN ++ +
Sbjct: 89 NEALELF-EXMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASA 147
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L+ MYS CG + +R++FD L R+ WN+++ G N D ++++ + + E+K
Sbjct: 148 -LLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMK-EIEVK 205
Query: 198 PDNFTFPCVIKACGGIADVGFG 219
P+N TF ++ AC V G
Sbjct: 206 PNNITFVGLLTACTHAGHVELG 227
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
+PB T V+ C + D+ G + + L ++ VS A++ MY KC V++
Sbjct: 3 EPBEITLATVLSICAKLGDLEMGLRIKKLXDNKNLGSNMIVSTAMLEMYVKCGAVDDGRL 62
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ M R++V W+++I G+++NG S E+ +L M + P+ +T+V+VL
Sbjct: 63 VFDHMARRDVVXWSAMIAGYAQNGRSNEALELFEXMKSAQ--IKPNDVTLVSVL 114
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+A D+ G++VH + + S F+ NT L+ MY+ CG + ++F+ + R
Sbjct: 146 LLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNT-LVHMYAACGHAESAHKLFELMAER 204
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL WN++++G+ N + L++F E+ ++PD FT ++ AC + + G
Sbjct: 205 NLVTWNSVINGYALNGRPNEALTLFREMGLRG-VEPDGFTMVSLLSACAELGALALGRRA 263
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K+GL G++ NAL+ +Y KC + + K+F+ M E+++VSW S+I G + NGF
Sbjct: 264 HVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFG 323
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L ++ +G +P IT V VL
Sbjct: 324 KEALELFKELE--RKGLMPSEITFVGVL 349
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 3/172 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+ T+ S C + ++F ++ N+F WN ++ G+ ++E L ++ ++ ++P
Sbjct: 80 IFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSC-IEP 138
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D T+P ++KA + DV G VH +A + G VFV N L+ MY C E KLF
Sbjct: 139 DTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLF 198
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+M ERNLV+WNS+I G++ NG E+ L + MG G PD T+V++L
Sbjct: 199 ELMAERNLVTWNSVINGYALNGRPNEALTLF-REMGL-RGVEPDGFTMVSLL 248
>gi|224088075|ref|XP_002308315.1| predicted protein [Populus trichocarpa]
gi|222854291|gb|EEE91838.1| predicted protein [Populus trichocarpa]
Length = 545
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
G+LLQ C +++ + +G+++H ++ + + + T+L Y+ C + F L
Sbjct: 14 GLLLQGCLYDRALFMGQQIHSRIIKIGDSLATNEYLETKLFIFYAKCHLFEVANNFFSRL 73
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+N+F W A++ + Y + L E+ DT + DNF P ++KAC + + FG
Sbjct: 74 SVKNVFSWAAIIGLNCRMGFYREALMGLCEMI-DTGILADNFVVPNILKACAALQWISFG 132
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
GVHG KMG VFVS++L+ YGKC +E+ K+F+ M ++N+V+WNS+I + +N
Sbjct: 133 RGVHGYVVKMGFDRCVFVSSSLVDAYGKCGILEDARKVFDNMSDKNVVTWNSMIGSYVQN 192
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
GF E+ + +M E P+ +T+++ L
Sbjct: 193 GFDVEAARVFSEMR--LEDVEPNQVTLLSFL 221
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 92/186 (49%), Gaps = 2/186 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC + I G+ VH V F +++ L+ Y CG D+R+VFD++ +
Sbjct: 119 ILKACAALQWISFGRGVHGYV-VKMGFDRCVFVSSSLVDAYGKCGILEDARKVFDNMSDK 177
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN+++ + +N + +F E+ + +++P+ T + A + V G
Sbjct: 178 NVVTWNSMIGSYVQNGFDVEAARVFSEMRLE-DVEPNQVTLLSFLSASANLGAVEEGKQA 236
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A G D + +++ Y K +++ +F +M E++ V+WN +I + + G
Sbjct: 237 HAIAVLGGYELDSILGGSILNFYSKVGLIKDAELVFGMMLEKDAVAWNLLISSYVQYGQV 296
Query: 283 CESFDL 288
++ DL
Sbjct: 297 EKALDL 302
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 2/189 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L A + +E GK+ H ++ + D I+ ++ YS G D+ VF + ++
Sbjct: 221 LSASANLGAVEEGKQAHA-IAVLGGYELDSILGGSILNFYSKVGLIKDAELVFGMMLEKD 279
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WN L+S + + L + L ++ D+ T ++ AC + ++ G H
Sbjct: 280 AVAWNLLISSYVQYGQVEKALDL-CHLMRLENMRFDSVTLASILSACSIMGNIELGKEGH 338
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ L+ D+ V+N++I MY KC + + +F ++L+ WN+++ ++E G +
Sbjct: 339 CYCIRNYLVSDLAVANSMIDMYAKCEKIADARHVFNSTMNKDLLLWNTLLTAYAELGVTG 398
Query: 284 ESFDLLIKM 292
E L M
Sbjct: 399 EVLKLFYGM 407
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 76/221 (34%), Gaps = 72/221 (32%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +IE+GK H +D + +I MY+ C D+R VF+S +
Sbjct: 321 ILSACSIMGNIELGKEGH-CYCIRNYLVSDLAVANSMIDMYAKCEKIADARHVFNSTMNK 379
Query: 163 -----------------------------------NLFQWNALVSGFTKNELYTDVLSIF 187
N+ WNA++ GF +N + +F
Sbjct: 380 DLLLWNTLLTAYAELGVTGEVLKLFYGMQLESVPPNVMSWNAVILGFIRNGQINEAQDMF 439
Query: 188 VELSSDTELKPDNFTFPCVI-----------------------------------KACGG 212
+ + + P+ TF +I AC
Sbjct: 440 SHMQA-VGIHPNLMTFTTLICGLVQNGFGNEAILVFQKMQECGIRANLPIIISTISACTD 498
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+A + +G +HG + L+ + V+ AL MY KC +++
Sbjct: 499 VASLQYGRAIHGYILRHDLLSPIPVATALAEMYSKCGNMDQ 539
>gi|302774719|ref|XP_002970776.1| hypothetical protein SELMODRAFT_94128 [Selaginella moellendorffii]
gi|300161487|gb|EFJ28102.1| hypothetical protein SELMODRAFT_94128 [Selaginella moellendorffii]
Length = 750
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 114/207 (55%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L C ++ G+ V ELV+ SND ++N+ L+ MY CG D+RRVFD + R
Sbjct: 282 LDTCAASGNLHEGRMVAELVTVYGLQSND-LVNSSLVHMYGKCGSLDDARRVFDGMAHRG 340
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
W+ +++ ++++ ++ + E+ S ++ D + ++ACG + + G VH
Sbjct: 341 PVVWSKMIAAYSEHGHCSEAFVLLKEMES-AKMVADASSCVAFLQACGSLLALEAGQEVH 399
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G GL DVFV NAL+ MYGKC VEE +F+ M E+N SWN ++ + +G+S
Sbjct: 400 GWITMKGLEQDVFVGNALVDMYGKCGSVEEAWAVFDNMKEKNWFSWNFMVEAYCSSGYST 459
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + ++M+ +EG P+ T +VL
Sbjct: 460 EAIQVFLQML--QEGVKPNAKTFTSVL 484
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 27/227 (11%)
Query: 92 HNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLD 151
H + E +++ACG +D+ GKR+H ++ + + F+ N L+ MY CG D
Sbjct: 6 HLDRVYEHLASIVRACGSSRDLIAGKRIHAHIADANLGNYRFLANL-LVEMYGKCGSLHD 64
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD-----TELKPDNFTFPCV 206
+RRVFDS+ + N+F WN LV +T+N + F ++ T L N V
Sbjct: 65 ARRVFDSIHSPNIFSWNLLVVAYTQNGRLREARQCFEKMPGKNVVCWTGLITANAQSGYV 124
Query: 207 IKACG---------------------GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
+ A G DV +H +MG+ + ++ ++ MY
Sbjct: 125 LSARGVFEKMPQRNRVTWTAMVWCLVNAGDVIEAKIIHEQLVQMGIAEQLPLAKFIVQMY 184
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
C ++E LF+++P +++ W ++I +++ G E+ L M
Sbjct: 185 LSCGSLDEARNLFDLLPSKDVGMWTAVIAAYAKYGRWQEAIKLFETM 231
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 88/167 (52%), Gaps = 5/167 (2%)
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR----NLFQWNALVSGFTKNELYTDVLS 185
S D + T +I Y+ G ++ ++F+++++R ++ WNA++S +N L
Sbjct: 202 SKDVGMWTAVIAAYAKYGRWQEAIKLFETMESRTGPYSVLVWNAIISASFQNGQLKGSLE 261
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
+F ++ ++PD+ T + C ++ G V + GL + V+++L+ MY
Sbjct: 262 LFWKMRRQG-VRPDSLTLATALDTCAASGNLHEGRMVAELVTVYGLQSNDLVNSSLVHMY 320
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
GKC +++ ++F+ M R V W+ +I +SE+G E+F LL +M
Sbjct: 321 GKCGSLDDARRVFDGMAHRGPVVWSKMIAAYSEHGHCSEAFVLLKEM 367
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 86/184 (46%), Gaps = 25/184 (13%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LQACG +E G+ VH ++ D + L+ MY CG ++ VFD++K
Sbjct: 381 AFLQACGSLLALEAGQEVHGWITMKG-LEQDVFVGNALVDMYGKCGSVEEAWAVFDNMKE 439
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N F WN +V + + T+ + +F+++ + +KP+ TF V+ ACG
Sbjct: 440 KNWFSWNFMVEAYCSSGYSTEAIQVFLQMLQEG-VKPNAKTFTSVLVACG---------- 488
Query: 222 VHGMAAKMGLIGDVFVSN------------ALIAMYGKCAFVEEMVKLFEVMPERNLVSW 269
H + G++ V++S+ + + G+ +V+E + + +P+ W
Sbjct: 489 -HAGFIREGILHLVYMSSDYDVVPIAEHYACAVGLLGRSGWVKEAEEYVKKLPDAEASVW 547
Query: 270 NSII 273
++++
Sbjct: 548 DALV 551
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
+++ACG D+ G +H A L F++N L+ MYGKC + + ++F+ + N
Sbjct: 17 IVRACGSSRDLIAGKRIHAHIADANLGNYRFLANLLVEMYGKCGSLHDARRVFDSIHSPN 76
Query: 266 LVSWNSIICGFSENGFSCESFDLLIKMMG----CEEGFI 300
+ SWN ++ +++NG E+ KM G C G I
Sbjct: 77 IFSWNLLVVAYTQNGRLREARQCFEKMPGKNVVCWTGLI 115
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +C D+ G++VH + + N+F+ T LI MY+ C + D+ F+ L R
Sbjct: 522 ILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVC-TALIDMYAKCMYLEDADVAFNRLSVR 580
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+LF W +++ + + L+ F ++ + +KP+ FT + C +A + G +
Sbjct: 581 DLFTWTVIITNYAQTNQGEKALNYFRQMQQEG-VKPNEFTLAGCLSGCSSLASLEGGQQL 639
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H M K G + D+FV +AL+ MY KC +EE LFE + R+ ++WN+IICG+++NG
Sbjct: 640 HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQG 699
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ M+ +EG PD +T +L
Sbjct: 700 NKALTAFRMML--DEGISPDGVTFTGIL 725
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 111/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C + K+++ G+ +H L+ N+FI L+ MYS CG +D+ VF ++K
Sbjct: 320 VLKGCANSKNLKQGQVIHSLIIKCGYEGNEFI-GCGLVDMYSKCGLAIDAIGVFKTIKKP 378
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+AL++ + + + +F L + P+ +T ++ A ++ +G +
Sbjct: 379 DIVVWSALITCLDQQGQSEESIKLF-HLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSI 437
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G DV VSNAL+ MY K V + KL+E M +R+L+SWN+ + G + G
Sbjct: 438 HACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMY 497
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ M+ EEGFIP++ T +++L
Sbjct: 498 DRPLTIFYHML--EEGFIPNMYTFISIL 523
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 2/191 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C ++ + + K +H L+ + D + L+ +Y+ C + +R V + R
Sbjct: 118 MLRECASKRSLGVAKAIHGLIVKDV-INPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDR 176
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W AL+ G D + +F E+ ++ + P+ FT +KAC + G +
Sbjct: 177 DVVSWTALIQGLVAEGFANDSIYLFQEMQNEG-IMPNEFTLATGLKACSLCMALDLGKQM 235
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K+GL+ D+FV +AL+ +Y KC +E K+F MPE+N V+WN ++ G+++ G
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDV 295
Query: 283 CESFDLLIKMM 293
L MM
Sbjct: 296 TGVLKLFCSMM 306
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL A + +++ G+ +H V F D ++ L+TMY G D ++++S+ R
Sbjct: 421 LLSAATNTGNLQYGQSIHACV-WKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDR 479
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WNA +SG +Y L+IF + + + P+ +TF ++ +C + DV +G V
Sbjct: 480 DLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFI-PNMYTFISILGSCSCLFDVHYGRQV 538
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K L + FV ALI MY KC ++E+ F + R+L +W II +++
Sbjct: 539 HAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQG 598
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ + +M +EG P+ T+ L
Sbjct: 599 EKALNYFRQMQ--QEGVKPNEFTLAGCL 624
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 107/212 (50%), Gaps = 6/212 (2%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
ATG L+AC +++GK++H + D + + L+ +Y+ CG + ++F
Sbjct: 217 ATG--LKACSLCMALDLGKQMHA-QAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIG 273
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ +N WN L++G+ + T VL +F + + ++K + FT V+K C ++
Sbjct: 274 MPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMM-ELDVKCNEFTLTTVLKGCANSKNLKQ 332
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G +H + K G G+ F+ L+ MY KC + + +F+ + + ++V W+++I +
Sbjct: 333 GQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQ 392
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G S ES L M + +P+ T+ ++L
Sbjct: 393 QGQSEESIKLFHLMRLGDT--LPNQYTICSLL 422
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 105/241 (43%), Gaps = 25/241 (10%)
Query: 36 NKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNAD 95
N+ S+R +F ++ A+TN QG K+LN + QE + +
Sbjct: 575 NRLSVRDLFTWTVIITNYAQTN----QG-------------EKALNYFRQMQQEGVKPNE 617
Query: 96 LKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV 155
A L C +E G+++H +V S S D + + L+ MY+ CG ++ +
Sbjct: 618 FTLAG--CLSGCSSLASLEGGQQLHSMVFKSGHVS-DMFVGSALVDMYAKCGCMEEAEAL 674
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GI 213
F++L R+ WN ++ G+ +N L+ F + D + PD TF ++ AC G+
Sbjct: 675 FEALIRRDTIAWNTIICGYAQNGQGNKALTAF-RMMLDEGISPDGVTFTGILSACSHQGL 733
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSI 272
+ G + M G+ V ++ + G+ +E+ + M +N + W ++
Sbjct: 734 VEEG-KEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETV 792
Query: 273 I 273
+
Sbjct: 793 L 793
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 203 FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ +++ C +G +HG+ K + D + +L+ +Y KC + + MP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 263 ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+R++VSW ++I G GF+ +S L +M EG +P+ T+ T L
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQ--NEGIMPNEFTLATGL 220
>gi|449448934|ref|XP_004142220.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37320-like [Cucumis sativus]
gi|449502632|ref|XP_004161699.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37320-like [Cucumis sativus]
Length = 524
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 113/208 (54%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C ++++ G + H V+ T F + + + L+++Y CG ++ RVFD + R
Sbjct: 136 VLSLCNSQRNLRGGIQYHS-VAIRTGFIANVYVGSSLVSLYGKCGELSNAYRVFDEMPVR 194
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A+++GF L +F E+ L+P+ FTF ++ AC G +G G +
Sbjct: 195 NVVSWTAIIAGFAVEWQVNMCLELFQEMKR-MALQPNEFTFVTILTACTGSGALGVGRSL 253
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H KMG + V+NALI+MY KC + + +FE M ++ VSWNS+I G++++G S
Sbjct: 254 HCQTVKMGFHSYLHVANALISMYCKCGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLS 313
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ DL K M ++ D IT + VL
Sbjct: 314 LRAIDLF-KAMRKQKQVEADAITFLGVL 340
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 92/197 (46%), Gaps = 4/197 (2%)
Query: 80 LNKALSLLQENLHNA-DLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
+N L L QE A E T V +L AC + +G+ +H + F + +
Sbjct: 212 VNMCLELFQEMKRMALQPNEFTFVTILTACTGSGALGVGRSLH-CQTVKMGFHSYLHVAN 270
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
LI+MY CG + +F++++ ++ WN++++G+ ++ L + +F + +++
Sbjct: 271 ALISMYCKCGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLRAIDLFKAMRKQKQVE 330
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
D TF V+ +C V G + ++GL ++ + +I + G+ ++E
Sbjct: 331 ADAITFLGVLSSCRHAGFVEEGRHYFNLMVELGLKPELDHYSCVIDLLGRAGLLKEAQNF 390
Query: 258 FEVMP-ERNLVSWNSII 273
E MP N + W S++
Sbjct: 391 IEKMPITPNSIVWGSLL 407
>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
Length = 551
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 118/207 (57%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
LQ C K + G +H + + F+++ ++T+LI YS G + +R+VFD + R
Sbjct: 4 LQLCIETKAKKPGHLIHNQI-LTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERT 62
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W+A +SG+++N Y D L +F+++ K + FT+ V++AC G+ + G +
Sbjct: 63 VVSWSAQISGYSQNGCYQDALLVFLDMLR-AGFKANQFTYGSVLRACTGLRCLQRGMQIQ 121
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G K ++ V +AL+ ++ KC +E+ LF +M ER++VSWN+II ++ GFS
Sbjct: 122 GCLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSG 181
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
+SF + MM +EG PD+ T +VL
Sbjct: 182 DSFRMFRSMM--QEGMSPDLFTFGSVL 206
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 106/211 (50%), Gaps = 5/211 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L+A G D+ ++H+L+ + + ++ LI Y+ C + ++ S+
Sbjct: 203 GSVLKASGMASDVIRVCQIHQLI-IQLGYGSHISLSGSLIDAYAKCESLASAHCLYKSMP 261
Query: 161 TRNLFQWNALVSGFTKNELYTD-VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+++ AL++G+ ++ Y+ L +F E+ +K D+ + C I+ + G
Sbjct: 262 MKDMISCTALMTGYARDSNYSSKALDLFKEIQ-QMHMKIDDVILCSMFNICANISSLSVG 320
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H +A K DV + NALI MY K +++ + F M E+N++SW S+I G+ +
Sbjct: 321 RQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEMEEKNVISWTSLITGYGSH 380
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ L KM EG P+ IT +++L
Sbjct: 381 GHGHEAIALFKKME--YEGLKPNDITFLSLL 409
>gi|357138796|ref|XP_003570973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 472
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 8/225 (3%)
Query: 90 NLHNADLKEATGV---LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC 146
+H+ D+ T L+ AC D + + +H S +S+ T L+ MY +C
Sbjct: 110 QMHHRDVPADTYTFPFLIHACS-GSDPPLCESLHG-QSIRVGYSSHLFTQTALMNMYFVC 167
Query: 147 GFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL-KPDNFTFPC 205
G +RRVFD ++ R++ W +VSG+ ++ + + +F E+ E+ P+ T
Sbjct: 168 GLAAPARRVFDEMQARDVVVWTGMVSGYVDTGMHLEAVEVFQEMRRGEEVASPNVATIVS 227
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
V AC G+ + + +HG K+G D+ V+NAL+ MYGKC VE LF +M E++
Sbjct: 228 VASACAGLGSLEYAKWLHGYVEKLGFGSDLIVTNALMDMYGKCGGVESARALFNLMHEKD 287
Query: 266 LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
L SW +II G + +G E L M + G +PD T + VL
Sbjct: 288 LHSWTTIISGLASHGHVKEGLALFSSMQ--KMGVLPDSTTFIVVL 330
>gi|357130454|ref|XP_003566863.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Brachypodium distachyon]
Length = 608
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 137/291 (47%), Gaps = 28/291 (9%)
Query: 28 FPATVIQRNKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLL 87
PAT H + S SL A + S QG ++ SL A +L+
Sbjct: 8 LPATPYPAKPH------ETPRSFSLHAALASLSQQG-----------GDNGSLRDAFALV 50
Query: 88 QENLHNADLKEATGV-------LLQACGHEKDIEIGKRVHEL-VSASTQFSNDFIINTRL 139
+ A V LLQ C + G++VH V + I T+L
Sbjct: 51 SRAERQSSPAVAVAVGPEVYVSLLQCCVAAGSLRAGRQVHAAAVKRGPYYCRHAYIGTKL 110
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
Y+ CG D+ R FD+L +N F W A++ +++ L+ ++ +V++ + + D
Sbjct: 111 AVFYARCGALDDAERAFDALPKKNAFAWAAVIGLWSRAGLHARAVAGYVDML-EAGVPAD 169
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
NF P V+KAC GI + G +H A K G V+V ++L+ YGKC V++ ++F+
Sbjct: 170 NFVVPNVLKACAGIGMIETGRALHAYAWKAGFGECVYVLSSLVDFYGKCGEVDDAREVFD 229
Query: 260 VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
MP +V+WNS++ G+ NG ++ DL +M EG +P ++V++ L
Sbjct: 230 AMPATTVVTWNSMLMGYINNGRIDDAVDLFYQMR--VEGVLPTRVSVLSFL 278
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 3/186 (1%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G R V+ S+ D I+ T +I Y G + VF + R+ WN +++G+
Sbjct: 289 GGRQGHAVAVSSGLEMDVILGTSIINFYCKVGLVEAAEAVFKQMVERDTITWNLMIAGYL 348
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
++E L I + + L+ D T C+I+A + G HG A + L D
Sbjct: 349 QDEQIDKAL-ITCQRMLRSGLRFDCVTLACIIRAYRESCNTEMGRAAHGYAVRNNLESDR 407
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
V+ LI +Y E ++F+VM R++V ++I + ++G S E+ LL +M
Sbjct: 408 AVACGLIELYMSTERTEYARRVFDVMSCRDIVMCKTMISAYEDHGMSTEARKLLYQMQ-- 465
Query: 296 EEGFIP 301
EG P
Sbjct: 466 LEGISP 471
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 160 KTR-NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
KTR NL W+ L+SG ++N ++ +V+++ ++ + E P F + A A V +
Sbjct: 503 KTRPNLRTWSLLISGLSQNGMHHEVMNLCCKMQ-EVEQAPSPTIFSAALLAMKTAASVQY 561
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYG 246
G VH K GL+ V +L+ MYG
Sbjct: 562 GKAVHACIVKKGLLLSKSVIQSLLNMYG 589
>gi|242032375|ref|XP_002463582.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
gi|241917436|gb|EER90580.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
Length = 610
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 107/198 (54%), Gaps = 4/198 (2%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL+ C D+ G+ VH ++A +++ + T L MY C P+D+RRVFD +
Sbjct: 64 ALLKLCAARADLATGRAVHAQLTARG-LASESLAATALANMYFKCRRPVDARRVFDRMPA 122
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE-LKPDNFTFPCVIKACGGIADVGFGS 220
R+ WNALV+G+ +N L + V + + +PD+ T V+ AC +G
Sbjct: 123 RDRVAWNALVAGYARNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLPACADARVLGACR 182
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH A + GL V VS A++ Y KC VE +F+ MP RN VSWN++I G++ENG
Sbjct: 183 EVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDWMPVRNSVSWNAMIDGYAENG 242
Query: 281 FSCESFDLLIKMMGCEEG 298
+ E+ L +M+ +EG
Sbjct: 243 NASEALALFWRMV--QEG 258
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 127/242 (52%), Gaps = 15/242 (6%)
Query: 76 ESKSLNKALSL----LQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSN 131
E+ + ++AL+L +QE + D A LQAC ++ +RVHEL+ SN
Sbjct: 240 ENGNASEALALFWRMVQEGVDVTD--AAVLAALQACRELGCLDEARRVHELLVRVGLKSN 297
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSL---KTRNLFQWNALVSGFTKNELYTDVLSIFV 188
++N LIT YS C + F+ L KTR WNA++ GFT+N D +F
Sbjct: 298 VSVMNA-LITTYSKCKRADLAAHAFNELGIKKTR--ISWNAMILGFTQNGCSEDAERLFA 354
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
+ + +KPD+FT VI A I+D +HG + + L D++V ALI MY KC
Sbjct: 355 RMQLEN-VKPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDIYVLTALIDMYSKC 413
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
V KLF+ +R++++WN++I G+ +GF + +L +M G G +P+ T ++
Sbjct: 414 GRVTIARKLFDSARDRHVITWNAMIHGYGSHGFGQVAVELFEEMKG--TGSLPNETTFLS 471
Query: 309 VL 310
VL
Sbjct: 472 VL 473
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 64/115 (55%)
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
+P TF ++K C AD+ G VH GL + + AL MY KC + +
Sbjct: 56 RPVLRTFTALLKLCAARADLATGRAVHAQLTARGLASESLAATALANMYFKCRRPVDARR 115
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+F+ MP R+ V+WN+++ G++ NG + + +++M G E G PD IT+V+VLP
Sbjct: 116 VFDRMPARDRVAWNALVAGYARNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLP 170
>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g01580
gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 116/209 (55%), Gaps = 2/209 (0%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V L+ACG +++ G+ +H V +D + + LI MY CG +++ R+FD L+
Sbjct: 65 VALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEK 124
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ W+++VSGF KN + F + +++ PD T ++ AC +++ G
Sbjct: 125 PDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRC 184
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VHG + G D+ + N+L+ Y K +E V LF+++ E++++SW+++I + +NG
Sbjct: 185 VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGA 244
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ + MM ++G P+V TV+ VL
Sbjct: 245 AAEALLVFNDMM--DDGTEPNVATVLCVL 271
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 102/162 (62%), Gaps = 3/162 (1%)
Query: 150 LDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKA 209
+D+R++F + R+L+QWN L+ ++ + + +VL F + D E KPDNFT P +KA
Sbjct: 11 VDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE-KPDNFTLPVALKA 69
Query: 210 CGGIADVGFGSGVHGMAAKMGLIG-DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS 268
CG + +V +G +HG K +G D++V ++LI MY KC + E +++F+ + + ++V+
Sbjct: 70 CGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVT 129
Query: 269 WNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
W+S++ GF +NG ++ + +M+ + PD +T++T++
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASD-VTPDRVTLITLV 170
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 106/208 (50%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ AC + +G+ VH V FSND + L+ Y+ ++ +F + +
Sbjct: 169 LVSACTKLSNSRLGRCVHGFV-IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEK 227
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+ +++ + +N + L +F ++ D +P+ T CV++AC D+ G
Sbjct: 228 DVISWSTVIACYVQNGAAAEALLVFNDMMDDGT-EPNVATVLCVLQACAAAHDLEQGRKT 286
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A + GL +V VS AL+ MY KC EE +F +P +++VSW ++I GF+ NG +
Sbjct: 287 HELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMA 346
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
S + +M E PD I +V VL
Sbjct: 347 HRSIEEF-SIMLLENNTRPDAILMVKVL 373
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 2/208 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQAC D+E G++ HEL + + ++T L+ MY C P ++ VF + +
Sbjct: 270 VLQACAAAHDLEQGRKTHEL-AIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRK 328
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W AL+SGFT N + + F + + +PD V+ +C + +
Sbjct: 329 DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCF 388
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G + F+ +L+ +Y +C + K+F + ++ V W S+I G+ +G
Sbjct: 389 HSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKG 448
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ + M+ E P+ +T +++L
Sbjct: 449 TKALETFNHMVKSSE-VKPNEVTFLSIL 475
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +C +E K H V SN FI L+ +YS CG ++ +VF+ + +
Sbjct: 372 VLGSCSELGFLEQAKCFHSYVIKYGFDSNPFI-GASLVELYSRCGSLGNASKVFNGIALK 430
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
+ W +L++G+ + T L F + +E+KP+ TF ++ AC
Sbjct: 431 DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSAC 478
>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
Length = 641
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 116/209 (55%), Gaps = 2/209 (0%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V L+ACG +++ G+ +H V +D + + LI MY CG +++ R+FD L+
Sbjct: 46 VALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEK 105
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ W+++VSGF KN + F + +++ PD T ++ AC +++ G
Sbjct: 106 PDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRC 165
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VHG + G D+ + N+L+ Y K +E V LF+++ E++++SW+++I + +NG
Sbjct: 166 VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGA 225
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ + MM ++G P+V TV+ VL
Sbjct: 226 AAEALLVFNDMM--DDGTEPNVATVLCVL 252
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 95/153 (62%), Gaps = 3/153 (1%)
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ R+L+QWN L+ ++ + + +VL F + D E KPDNFT P +KACG + +V +
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE-KPDNFTLPVALKACGELREVNY 59
Query: 219 GSGVHGMAAKMGLIG-DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G +HG K +G D++V ++LI MY KC + E +++F+ + + ++V+W+S++ GF
Sbjct: 60 GEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFE 119
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+NG ++ + +M+ + PD +T++T++
Sbjct: 120 KNGSPYQAVEFFRRMVMASD-VTPDRVTLITLV 151
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 106/208 (50%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ AC + +G+ VH V FSND + L+ Y+ ++ +F + +
Sbjct: 150 LVSACTKLSNSRLGRCVHGFV-IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEK 208
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+ +++ + +N + L +F ++ D +P+ T CV++AC D+ G
Sbjct: 209 DVISWSTVIACYVQNGAAAEALLVFNDMMDDGT-EPNVATVLCVLQACAAAHDLEQGRKT 267
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A + GL +V VS AL+ MY KC EE +F +P +++VSW ++I GF+ NG +
Sbjct: 268 HELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMA 327
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
S + +M E PD I +V VL
Sbjct: 328 HRSIEEF-SIMLLENNTRPDAILMVKVL 354
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 2/208 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQAC D+E G++ HEL + + ++T L+ MY C P ++ VF + +
Sbjct: 251 VLQACAAAHDLEQGRKTHEL-AIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRK 309
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W AL+SGFT N + + F + + +PD V+ +C + +
Sbjct: 310 DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCF 369
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G + F+ +L+ +Y +C + K+F + ++ V W S+I G+ +G
Sbjct: 370 HSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKG 429
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ + M+ E P+ +T +++L
Sbjct: 430 TKALETFNHMVKSSE-VKPNEVTFLSIL 456
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +C +E K H V SN FI L+ +YS CG ++ +VF+ + +
Sbjct: 353 VLGSCSELGFLEQAKCFHSYVIKYGFDSNPFI-GASLVELYSRCGSLGNASKVFNGIALK 411
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
+ W +L++G+ + T L F + +E+KP+ TF ++ AC
Sbjct: 412 DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSAC 459
>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
Length = 1359
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 113/202 (55%), Gaps = 12/202 (5%)
Query: 114 EIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+ GK VH EL Q + I + L+T+YS CG D+ VF S++ +++ W +L+S
Sbjct: 889 DYGKSVHAELFKRPIQSTP--AIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLIS 946
Query: 173 GFTKNELYTDVLSIFVELSSDTE-LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
G KN + + L +F ++ D + LKPD+ VI AC G+ + FG VHG K G
Sbjct: 947 GLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQ 1006
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG---FSCESFDL 288
+ +VFV ++LI +Y KC E +K+F M N+V+WNS+I +S N S E F+L
Sbjct: 1007 VLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNL 1066
Query: 289 LIKMMGCEEGFIPDVITVVTVL 310
++ +G PD +++ +VL
Sbjct: 1067 ML-----SQGIFPDSVSITSVL 1083
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 128/249 (51%), Gaps = 17/249 (6%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNAD-LKEATGVL---LQACGHEKDIEIGKRVHELVSA 125
I+ LC+ K +AL + + + D LK + ++ + AC + + G +VH +
Sbjct: 945 ISGLCKNGK-FKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIK 1003
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
+ Q N F+ + LI +YS CG P + +VF S++ N+ WN+++S +++N L +
Sbjct: 1004 TGQVLNVFV-GSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIE 1062
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
+F L + PD+ + V+ A A + G +HG ++G+ D + NALI MY
Sbjct: 1063 LF-NLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMY 1121
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES----FDLLIKMMGCEEGFIP 301
KC F + +F+ M ++L++WN +I G+ +G C + FD L K G P
Sbjct: 1122 VKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHG-DCRTALSLFDELKK-----AGETP 1175
Query: 302 DVITVVTVL 310
D +T ++++
Sbjct: 1176 DDVTFLSLI 1184
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 2/207 (0%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC ++ G+++H V ND ++T L++MYS CG ++ VF + +
Sbjct: 778 LGACSQSENSAFGRQIHCDV-VKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKR 836
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L WNA+V+ + +N+ L +F + + L PD+FT VI C +G VH
Sbjct: 837 LEIWNAMVAAYVENDNGYSALELFGFMRQKSVL-PDSFTLSNVISCCSMFGLYDYGKSVH 895
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
K + + +AL+ +Y KC + +F+ M E+++V+W S+I G +NG
Sbjct: 896 AELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFK 955
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + M ++ PD + +V+
Sbjct: 956 EALKVFGDMKDDDDSLKPDSDIMTSVI 982
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 11/191 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS---- 158
LL+AC ++ GK +H + + D I T L+ MY CGF + +VFD
Sbjct: 567 LLKACSSLTNLSSGKTIHGSIIV-LGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQS 625
Query: 159 -LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIAD 215
+ R++ N+++ G+ K + + + F + ++PD F+ V+ G
Sbjct: 626 GVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLV-LGVRPDAFSLSIVVSVLCKEGNFR 684
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF-EVMPERNLVSWNSIIC 274
G +HG + L GD F+ ALI MY K + ++F E+ + N+V WN +I
Sbjct: 685 REDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIV 744
Query: 275 GFSENGFSCES 285
GF + CES
Sbjct: 745 GFGGSEI-CES 754
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 57/114 (50%)
Query: 168 NALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAA 227
N+ + + Y L ++ + + L FTFP ++KAC + ++ G +HG
Sbjct: 529 NSGIRALIQKGEYLQALHLYTKHDGSSPLWTSVFTFPSLLKACSSLTNLSSGKTIHGSII 588
Query: 228 KMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+G D F++ +L+ MY KC F++ V++F+ + + + + +C +G+
Sbjct: 589 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGY 642
>gi|413934541|gb|AFW69092.1| hypothetical protein ZEAMMB73_188982 [Zea mays]
Length = 630
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 115/210 (54%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G ++ A G+ K G+ H V + + I+ + + MY+ CG +D+R+VFD +K
Sbjct: 250 GSMMSALGNMKRARQGREAHAQV-VTRGLCGNVIVESSTLDMYAKCGMMVDARKVFDRMK 308
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
N W AL+ G+ + + VLS+F ++ E D ++ ++++C G++ V G
Sbjct: 309 APNAVSWCALLGGYCQTGKHEKVLSLFRQMHM-QEQDDDWYSLGTLLRSCAGLSAVKLGK 367
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H + +M GDV V +AL+ +Y KC V+ ++F++ RN+++WN++ICG ++NG
Sbjct: 368 EIHCRSMRMRGCGDVIVESALVDLYAKCGAVDYAYRVFKMSSVRNMITWNAMICGCAQNG 427
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L +M+ G PD I+ + VL
Sbjct: 428 HGERAISLFNEMV--RGGVKPDYISFIGVL 455
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 1/188 (0%)
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNL 164
+AC D+ G VH + + +D ++ + L+ MY G P D+R+ F+ ++ +
Sbjct: 152 KACAVLHDLRAGACVHG-TTVVRGYGDDGVVLSALVDMYGHSGAPGDARKAFEEMRAPDG 210
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
+ +L+S F +N+ + + L F + + PD TF ++ A G + G H
Sbjct: 211 ICYTSLISAFVRNDWFDEALRWFQAMLRTDGVWPDGCTFGSMMSALGNMKRARQGREAHA 270
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCE 284
GL G+V V ++ + MY KC + + K+F+ M N VSW +++ G+ + G +
Sbjct: 271 QVVTRGLCGNVIVESSTLDMYAKCGMMVDARKVFDRMKAPNAVSWCALLGGYCQTGKHEK 330
Query: 285 SFDLLIKM 292
L +M
Sbjct: 331 VLSLFRQM 338
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 84/202 (41%), Gaps = 6/202 (2%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
+G +H + + ++ ++ N L L + R FD L R++ +++++
Sbjct: 53 RLGYSLHARAARAGLLADRYLANALLAFYVRLPDHLPHALRAFDDLPRRDVVAHSSVLAA 112
Query: 174 FTKNELYTDVLSIFVELSS-----DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK 228
F + L L ++S D ++ P KAC + D+ G+ VHG
Sbjct: 113 FLRAGLPRRALLQLRTMASGGYGADDDVAPSAHALSASAKACAVLHDLRAGACVHGTTVV 172
Query: 229 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
G D V +AL+ MYG + K FE M + + + S+I F N + E+
Sbjct: 173 RGYGDDGVVLSALVDMYGHSGAPGDARKAFEEMRAPDGICYTSLISAFVRNDWFDEALRW 232
Query: 289 LIKMMGCEEGFIPDVITVVTVL 310
M+ +G PD T +++
Sbjct: 233 FQAMLR-TDGVWPDGCTFGSMM 253
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 109/201 (54%), Gaps = 8/201 (3%)
Query: 86 LLQENLHNADLKEATGV------LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
++++ L + D +E L+ AC + ++ + +H + A +QF+ ++ L
Sbjct: 47 IIRDTLDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHL-AGSQFAGSVFLDNSL 105
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
I +Y CG D+RRVFD + R++ W +L++G+ +N++ + L + + KP+
Sbjct: 106 IHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRG-RFKPN 164
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
FTF ++KA G A G G +H + K DV+V +AL+ MY +C ++ + +F+
Sbjct: 165 GFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFD 224
Query: 260 VMPERNLVSWNSIICGFSENG 280
+ +N VSWN++I GF+ G
Sbjct: 225 QLESKNGVSWNALIAGFARKG 245
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+A G IG+++H L + + +D + + L+ MY+ CG + VFD L+++
Sbjct: 171 LLKAAGASASSGIGEQIHAL-TVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESK 229
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WNAL++GF + L +F E+ + + +FT+ V A GI + G V
Sbjct: 230 NGVSWNALIAGFARKGDGETTLLMFAEMQRNG-FEATHFTYSSVFSAIAGIGALEQGKWV 288
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G FV N ++ MY K + + K+F+ + ++++V+WNS++ F++ G
Sbjct: 289 HAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLG 348
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +M C G + IT +++L
Sbjct: 349 REAVTHFEEMRKC--GVHLNQITFLSIL 374
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
EL + +I AC + +H A G VF+ N+LI +Y KC V +
Sbjct: 59 ELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADA 118
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F+ MP R++ SW S+I G+++N E+ LL M+ F P+ T ++L
Sbjct: 119 RRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGML--RGRFKPNGFTFASLL 172
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 115/207 (55%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+AC + + IG++V + FS+ + LI+MY+ G D+R+ FD L +N
Sbjct: 383 LKACANLAALRIGEQVFTH-AVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKN 441
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L +N ++ + KN + L +F E+ D + FTF ++ I +G G +H
Sbjct: 442 LISYNTVIDAYAKNLNSEEALELFNEIE-DQGMGASAFTFASLLSGAASIGTIGKGEQIH 500
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
K GL + V NALI+MY +C +E ++FE M +RN++SW SII GF+++GF+
Sbjct: 501 ARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFAT 560
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L KM+ EEG P+ +T + VL
Sbjct: 561 QALELFHKML--EEGVRPNEVTYIAVL 585
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 120/238 (50%), Gaps = 13/238 (5%)
Query: 80 LNKALSLLQENLHNA---DLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
L+KA+S L+ +H DL+ + + L+ C + +IG VHE ++ S + +N
Sbjct: 47 LHKAISTLEHMVHQGSHPDLQTYS-LFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLN 105
Query: 137 TRLITMYSLCGFPLDSRRVFDSL-KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
+ LI++YS CG + +F + +R+L W+A+VS F N + L FV++ +
Sbjct: 106 S-LISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENG- 163
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG-LIGDVFVSNALIAMY--GKCAFVE 252
P+ + F +AC V G + G K G L DV V LI M+ G+ V
Sbjct: 164 YYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVS 223
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+FE MPERN V+W +I + G++ E+ DL + M+ G+ PD T+ V+
Sbjct: 224 AF-KVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIF--SGYEPDRFTLSGVI 278
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 107/191 (56%), Gaps = 6/191 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC---GFPLDSRRVFDSL 159
++ AC + + + +G+++H + + D + LI MY+ C G +R++FD +
Sbjct: 277 VISACANMELLLLGQQLHSQ-AIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI 335
Query: 160 KTRNLFQWNALVSGFTKNELYTD-VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
N+F W A+++G+ + Y + L +F + T + P++FTF +KAC +A +
Sbjct: 336 LDHNVFSWTAMITGYVQKGGYDEEALDLFRGMIL-THVIPNHFTFSSTLKACANLAALRI 394
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G V A K+G V+N+LI+MY + +++ K F+++ E+NL+S+N++I +++
Sbjct: 395 GEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAK 454
Query: 279 NGFSCESFDLL 289
N S E+ +L
Sbjct: 455 NLNSEEALELF 465
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 92/194 (47%), Gaps = 6/194 (3%)
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC-GFPLDSRRVFDSLKTRN 163
+AC + + +G + V + +D + LI M+ G + + +VF+ + RN
Sbjct: 176 RACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERN 235
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
W +++ + + + +F+++ + +PD FT VI AC + + G +H
Sbjct: 236 AVTWTLMITRLMQFGYAGEAIDLFLDMIF-SGYEPDRFTLSGVISACANMELLLLGQQLH 294
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV---KLFEVMPERNLVSWNSIICGF-SEN 279
A + GL D V LI MY KC+ M K+F+ + + N+ SW ++I G+ +
Sbjct: 295 SQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKG 354
Query: 280 GFSCESFDLLIKMM 293
G+ E+ DL M+
Sbjct: 355 GYDEEALDLFRGMI 368
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 109/201 (54%), Gaps = 8/201 (3%)
Query: 86 LLQENLHNADLKEATGV------LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
++++ L + D +E L+ AC + ++ + +H + A +QF+ ++ L
Sbjct: 47 IIRDTLDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHL-AGSQFAGSVFLDNSL 105
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
I +Y CG D+RRVFD + R++ W +L++G+ +N++ + L + + KP+
Sbjct: 106 IHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLR-GRFKPN 164
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
FTF ++KA G A G G +H + K DV+V +AL+ MY +C ++ + +F+
Sbjct: 165 GFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFD 224
Query: 260 VMPERNLVSWNSIICGFSENG 280
+ +N VSWN++I GF+ G
Sbjct: 225 QLESKNGVSWNALIAGFARKG 245
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+A G IG+++H L + + +D + + L+ MY+ CG + VFD L+++
Sbjct: 171 LLKAAGASASSGIGEQIHAL-TVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESK 229
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WNAL++GF + L +F E+ + + +FT+ V A GI + G V
Sbjct: 230 NGVSWNALIAGFARKGDGETTLLMFAEMQRNG-FEATHFTYSSVFSAIAGIGALEQGKWV 288
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G FV N ++ MY K + + K+F+ + ++++V+WNS++ F++ G
Sbjct: 289 HAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLG 348
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +M C G + IT +++L
Sbjct: 349 REAVTHFEEMRKC--GVHLNQITFLSIL 374
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
EL + +I AC + +H A G VF+ N+LI +Y KC V +
Sbjct: 59 ELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADA 118
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F+ MP R++ SW S+I G+++N E+ LL M+ F P+ T ++L
Sbjct: 119 RRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGR--FKPNGFTFASLL 172
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 120/229 (52%), Gaps = 6/229 (2%)
Query: 68 QEITTLCEESKSLN---KALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVS 124
+ IT+LC++ K N KA LQ+ L+ AC + + +E GK++H+ +
Sbjct: 32 EYITSLCKQ-KLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHML 90
Query: 125 ASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVL 184
S D + ++ MY C D+++VFD++ RN+ W ++++G+++N + L
Sbjct: 91 KSKSHP-DLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNAL 149
Query: 185 SIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAM 244
+ ++ + + PD FTF +IKAC + D+G G +H K + NALI+M
Sbjct: 150 EFYFQMLQ-SGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISM 208
Query: 245 YGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
Y K + + + +F M R+L+SW S+I GFS+ G+ E+ +M+
Sbjct: 209 YTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEML 257
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 109/210 (51%), Gaps = 3/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +++AC DI +G+++H V S +F I LI+MY+ +D+ VF +
Sbjct: 168 GSIIKACSSLGDIGLGRQLHAHVLKS-EFGAHIIAQNALISMYTKSNLIIDALDVFSRMA 226
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
TR+L W ++++GF++ + L F E+ P+ F F V AC + +G
Sbjct: 227 TRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGR 286
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HGM+ K GL DVF +L MY KC + +F + +LV+WN+II GF+ G
Sbjct: 287 QLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGG 346
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ +M +G IPD ITV ++L
Sbjct: 347 DAKEAIAFFSQMR--HQGLIPDEITVRSLL 374
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 114/243 (46%), Gaps = 13/243 (5%)
Query: 69 EITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQ 128
E+ LC + L++ + L E + G + AC E G+++H + S
Sbjct: 246 ELEALCYFKEMLHQGVYLPNEFIF--------GSVFSACSSLLQPEYGRQLHGM-SIKFG 296
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
D L MY+ CG +R VF + +L WNA+++GF + ++ F
Sbjct: 297 LGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFS 356
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
++ L PD T ++ AC +++ G VHG KMGL DV V N L+ MY KC
Sbjct: 357 QMRHQG-LIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKC 415
Query: 249 AFVEEMVKLFEVMP-ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
+ + + + FE M +LVSWN+I+ + + E F LL K+M C PD IT+
Sbjct: 416 SELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLL-KLM-CISQHRPDYITLT 473
Query: 308 TVL 310
VL
Sbjct: 474 NVL 476
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 115/232 (49%), Gaps = 7/232 (3%)
Query: 82 KALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
+A++ + H + + V LL AC ++ G +VH ++ D + L
Sbjct: 350 EAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYIN-KMGLDLDVPVCNTL 408
Query: 140 ITMYSLCGFPLDSRRVFDSLK-TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+TMY+ C D+ F+ ++ +L WNA+++ +++ +V + ++L ++ +P
Sbjct: 409 LTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRL-LKLMCISQHRP 467
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D T V+ A + G+ VH A K GL D V+N LI +Y KC ++ K+F
Sbjct: 468 DYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIF 527
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ M ++VSW+S+I G+++ G+ E+ L M + P+ +T V VL
Sbjct: 528 DSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLD--VKPNHVTFVGVL 577
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Query: 168 NALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAA 227
N ++ K +L+ + + F L T T+ +I AC + + G +H
Sbjct: 31 NEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHML 90
Query: 228 KMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFD 287
K D+ + N ++ MYGKC +++ K+F+ MPERN+VSW S+I G+S+NG + +
Sbjct: 91 KSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALE 150
Query: 288 LLIKMMGCEEGFIPDVITVVTVL 310
+M+ + G +PD T +++
Sbjct: 151 FYFQML--QSGVMPDQFTFGSII 171
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 100/216 (46%), Gaps = 8/216 (3%)
Query: 70 ITTLC---EESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSAS 126
I T C ++++ + + L L+ + H D T VL A IEIG +VH +
Sbjct: 440 ILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVL-GASAETVSIEIGNQVH-CYALK 497
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
T + D + LI +Y+ CG + ++FDS+ ++ W++L+ G+ + + L +
Sbjct: 498 TGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKL 557
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG-MAAKMGLIGDVFVSNALIAMY 245
F + ++KP++ TF V+ AC + V G ++G M + G+ + ++ +
Sbjct: 558 FKTMRR-LDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLL 616
Query: 246 GKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENG 280
+ + E M + ++V W +++ +G
Sbjct: 617 ARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHG 652
>gi|302773754|ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
gi|300161810|gb|EFJ28424.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
Length = 1096
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 110/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ C +K GK VH+ + +S N ++ N LI MY+ CG D+ VF+ L
Sbjct: 32 LLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQN-HLIFMYAKCGCLQDAVEVFELLPCP 90
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+F W AL++ + K +VL F ++ D KPD F F V+ AC + G +
Sbjct: 91 NVFSWTALITAYAKEGHLREVLGFFRKMQLDG-TKPDAFVFSTVLTACSSAGALNEGKAI 149
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G+ V V NA++ +YGKC V E +FE +PERNLVSWN++I ++NG
Sbjct: 150 HDCVVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGH- 207
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
C+ + ++M + P+ T V+V+
Sbjct: 208 CKDAMQVFQLMDLDGSVRPNDATFVSVV 235
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 110/214 (51%), Gaps = 13/214 (6%)
Query: 103 LLQACGHEKDIEIGKRVHE---LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
+L AC + GK +H+ L TQ + I+N +Y CG +++ VF+ L
Sbjct: 133 VLTACSSAGALNEGKAIHDCVVLAGMETQVVGNAIVN-----LYGKCGRVHEAKAVFERL 187
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
RNL WNAL++ +N D + +F + D ++P++ TF V+ AC + D+ G
Sbjct: 188 PERNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRG 247
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLV---SWNSIICGF 276
H + G +FV N+L+ MYGKC V+ +FE M R+++ SW II F
Sbjct: 248 KSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAF 307
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ NG E+F L KM EG +P+ +T VTVL
Sbjct: 308 AHNGHLLEAFVLFYKMD--LEGVLPNKVTFVTVL 339
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 100/192 (52%), Gaps = 9/192 (4%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++ +C +D+ +++H + AS F +D ++ L+TMY CG + +F++LK
Sbjct: 433 AVMDSCLRPEDLPRAEQIHAHMVASG-FESDVVLQVCLVTMYGKCGSVDSAWSIFENLKE 491
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ WN+++S F N Y L ++ + + KPD T+ V+ AC +++
Sbjct: 492 RSVVAWNSMLSAFASNGCYERSLKLYERMLLEG-TKPDKITYLAVLDACQSVSE------ 544
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENG 280
AA L D+ NA ++ Y +C ++E F+ + + N V+WN++I G +++G
Sbjct: 545 ARRYAATFELELDIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHG 604
Query: 281 FSCESFDLLIKM 292
S ++ + KM
Sbjct: 605 ESKQALECFWKM 616
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 104/190 (54%), Gaps = 9/190 (4%)
Query: 124 SASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN-LFQWNALVSGFTKNELYTD 182
+A+ + D ++ Y+ CG +++ FD+++ +N WNA++SG ++
Sbjct: 549 AATFELELDIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQ 608
Query: 183 VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL--IGDVFVSNA 240
L F ++ + ++ ++ T+ ++AC + D+ G +H A++ L I + +SNA
Sbjct: 609 ALECFWKMELEG-VRANSVTYLASLEACSSLKDLTRGRQLH---ARILLENIHEANLSNA 664
Query: 241 LIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI 300
+I MYGKC ++E + F MPER+++SWN++I ++++G ++ + +M EG+
Sbjct: 665 VINMYGKCGSLDEAMDEFVKMPERDVISWNTMIATYAQHGSGRQALEFFKQMD--LEGWT 722
Query: 301 PDVITVVTVL 310
PD T + +
Sbjct: 723 PDRATYLGAI 732
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 102/210 (48%), Gaps = 9/210 (4%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+AC KD+ G+++H + + ++ +I MY CG ++ F + R+
Sbjct: 632 LEACSSLKDLTRGRQLHARILLENIHEAN--LSNAVINMYGKCGSLDEAMDEFVKMPERD 689
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTE-LKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN +++ + ++ L F ++ D E PD T+ I ACG + + G +
Sbjct: 690 VISWNTMIATYAQHGSGRQALEFFKQM--DLEGWTPDRATYLGAIDACGSVPSLALGKTI 747
Query: 223 HGMAAKMG--LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H + A L D V+ AL+ MY +C + + +F RNLV+W+++I +++G
Sbjct: 748 HSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHG 807
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL +M +G PD +T T++
Sbjct: 808 RENEALDLFREMQ--LQGTKPDALTFSTLV 835
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 7/180 (3%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSL-KTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
D + T ++ ++ G +R VF++L +RN+ W ++ + + ++ +
Sbjct: 363 DTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRM 422
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
+ +P+ TF V+ +C D+ +H G DV + L+ MYGKC
Sbjct: 423 ----DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGS 478
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
V+ +FE + ER++V+WNS++ F+ NG S L +M+ EG PD IT + VL
Sbjct: 479 VDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLYERML--LEGTKPDKITYLAVL 536
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 14/169 (8%)
Query: 104 LQACGHEKDIEIGKRVHELVS-ASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ ACG + +GK +H +V+ A+ D + T L+TMY+ CG D++ VF +R
Sbjct: 732 IDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSR 791
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC---GGIADVGFG 219
NL W+ L++ ++ + L +F E+ KPD TF ++ AC G + D
Sbjct: 792 NLVTWSNLIAACAQHGRENEALDLFREMQLQGT-KPDALTFSTLVAACSRRGVVKD---- 846
Query: 220 SGVHGMAAKMGLIGDVFVS----NALIAMYGKCAFVEEMVKLFEVMPER 264
G + +G + V S ++ + G+ +EE L + MP +
Sbjct: 847 -GGRRIFDALGRVYPVSASAEHYGCMVEVLGRAGKLEEAEGLIQGMPRK 894
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
S L+P + +++ C G VH G + ++ N LI MY KC +
Sbjct: 20 SSESLQPARYA--SLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCL 77
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ V++FE++P N+ SW ++I +++ G E KM +G PD TVL
Sbjct: 78 QDAVEVFELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQ--LDGTKPDAFVFSTVL 134
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 115/209 (55%), Gaps = 6/209 (2%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L AC K +E GK +H +S + D I+ L+TMY+ CG D++R+F+ +
Sbjct: 126 TVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSG 185
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ WNA+++ + ++ + + + ++ D +++P TF V+ AC + + G
Sbjct: 186 RSVSSWNAMIAAYAQSGHFEEAIRLY----EDMDVEPSVRTFTSVLSACSNLGLLDQGRK 241
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H + + G D+ + NAL+ MY +C +++ K+F+ +P R++VSW+++I F+E
Sbjct: 242 IHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDL 301
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + KM EG P+ T +VL
Sbjct: 302 FDEAIEFYSKMQ--LEGVRPNYYTFASVL 328
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 110/222 (49%), Gaps = 19/222 (8%)
Query: 97 KEATGVLLQACGHEKD-------IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFP 149
+E G + GH +D +E +++H+ +S + S + + ++ Y CG
Sbjct: 17 EEKAGSRFDSSGHYRDALRQCQDLESVRQIHDRISGAA--SANVFLGNEIVRAYGKCGSV 74
Query: 150 LDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKA 209
+R FD++ +N + W ++++ + +N Y L ++ + +L+P+ + V+ A
Sbjct: 75 ASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM----DLQPNPVVYTTVLGA 130
Query: 210 CGGIADVGFGSGVHG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS 268
C I + G +H ++ GL DV + N+L+ MY KC +E+ +LFE M R++ S
Sbjct: 131 CASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSS 190
Query: 269 WNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
WN++I ++++G E+ L M P V T +VL
Sbjct: 191 WNAMIAAYAQSGHFEEAIRLYEDM-----DVEPSVRTFTSVL 227
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 103/208 (49%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC D+ G+ VH+ + + + + T L+ +Y+ G ++R +FD ++ R
Sbjct: 327 VLLACASVGDLRAGRAVHDQILGNG-YKITLVNGTALVDLYTSYGSLDEARSLFDQIENR 385
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W L+ G++K T VL ++ E+ + T++ + CVI AC +
Sbjct: 386 DEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQA 445
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G+I D ++ +L+ MY + +E ++F+ M R+ ++W ++I G++++G
Sbjct: 446 HSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEH 505
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L +M EG P +T + VL
Sbjct: 506 GLALGLYKEME--LEGAEPSELTFMVVL 531
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 96/190 (50%), Gaps = 2/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + ++ G+++H L+S S D + L+TMY+ C D+ ++F L R
Sbjct: 226 VLSACSNLGLLDQGRKIHALIS-SRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRR 284
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+A+++ F + +L+ + + + ++ + ++P+ +TF V+ AC + D+ G V
Sbjct: 285 DVVSWSAMIAAFAETDLFDEAIEFYSKMQLEG-VRPNYYTFASVLLACASVGDLRAGRAV 343
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G + AL+ +Y ++E LF+ + R+ W +I G+S+ G
Sbjct: 344 HDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHR 403
Query: 283 CESFDLLIKM 292
+L +M
Sbjct: 404 TGVLELYREM 413
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 119/209 (56%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ G + + K++H + S S D I + L+ Y+ CG+ ++R++FD L+ R
Sbjct: 27 LLKHYGAAQSLTSTKQLHAHLITSGLLSID--IRSVLVATYAHCGYVHNARKLFDELRQR 84
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+N ++ + Y + + +F+E+ + PDN+T+P VIKAC + V +G +
Sbjct: 85 GTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVL 144
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ +FV N+L+AMY C VEE K+F+ M E+++VSWN++I G+ +NGF+
Sbjct: 145 HGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFA 204
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ + +M+ + G D +VV+VLP
Sbjct: 205 NTALVVFNQMV--DSGVEIDGASVVSVLP 231
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 122/208 (58%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC +E G+ +H L S S+ F++N+ L+ MY CG ++R+VFD++K +
Sbjct: 128 VIKACSELLLVEYGRVLHGLTLVSKFGSHLFVLNS-LLAMYMNCGEVEEARKVFDAMKEK 186
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN +++G+ KN L +F ++ D+ ++ D + V+ ACG + ++ G V
Sbjct: 187 SVVSWNTMINGYFKNGFANTALVVFNQMV-DSGVEIDGASVVSVLPACGYLKELEVGRRV 245
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ + ++G VSNAL+ MY KC ++E +F+ M ER++VSW S+I G+ NG +
Sbjct: 246 HGLVEE-KVLGKKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDA 304
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L K+M EG P+ +T+ +L
Sbjct: 305 KSALSLF-KIMQI-EGLRPNSVTIALIL 330
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG+ K++E+G+RVH LV + I++ L+ MY+ CG ++R VFD++ R
Sbjct: 229 VLPACGYLKELEVGRRVHGLVE--EKVLGKKIVSNALVDMYAKCGSMDEARLVFDNMVER 286
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W ++++G+ N LS+F ++ L+P++ T ++ AC + ++ G +
Sbjct: 287 DVVSWTSMINGYILNGDAKSALSLF-KIMQIEGLRPNSVTIALILLACASLNNLKDGRCL 345
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K L +V V +LI MY KC + +F + V WN+++ G N +
Sbjct: 346 HGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLA 405
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ L KM+ EG + T ++LP
Sbjct: 406 TEAIGLFKKML--MEGVEINAATCNSLLP 432
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 107/212 (50%), Gaps = 6/212 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
++L AC +++ G+ +H V +S + + T LI MY+ C S VF
Sbjct: 327 ALILLACASLNNLKDGRCLHGWVMKQRLYS-EVAVETSLIDMYAKCNCLGLSFSVFTRTS 385
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ WNAL+SG N+L T+ + +F ++ + ++ + T ++ A G +AD+ +
Sbjct: 386 RKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEG-VEINAATCNSLLPAYGILADLQPVN 444
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP--ERNLVSWNSIICGFSE 278
++ + G + ++ V+ +LI +Y KC +E K+F +P +++ W+ II G+
Sbjct: 445 NINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGM 504
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+G + L +M+ + G P+ +T +VL
Sbjct: 505 HGHGETAVSLFKQMV--QSGVKPNDVTFTSVL 534
>gi|302803175|ref|XP_002983341.1| hypothetical protein SELMODRAFT_117959 [Selaginella moellendorffii]
gi|300149026|gb|EFJ15683.1| hypothetical protein SELMODRAFT_117959 [Selaginella moellendorffii]
Length = 421
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 111/207 (53%), Gaps = 1/207 (0%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+AC + E G+ + V+ F D + L+ MY+ CG +DSRRVFD ++ +
Sbjct: 95 LKACAVLAEAEEGRELEGKVAKIYGFQWDLFVANSLVDMYAKCGSMVDSRRVFDGMRRHD 154
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN+L+SG+ N+ L +FV + + D+ TF +KACG + + G +H
Sbjct: 155 VVSWNSLISGYADNDQGEAALELFVPMELEG-CAHDSRTFLASLKACGCVGALDIGRTLH 213
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G +GL GDV ++ +L+ YGKC + + ++F + +++V+WN+++ G+S G +
Sbjct: 214 GKIRDLGLDGDVVIATSLVDFYGKCGSMVDAEQVFSSIVTKDIVAWNALLTGYSRQGDTE 273
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
F +MM PD +T + +L
Sbjct: 274 ALFQAFDRMMTSRPRVRPDGVTFLCLL 300
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 94/162 (58%), Gaps = 3/162 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D ++ L+ +Y+ CG D+RR+FD L R++ WNA++ G+ +N+ L +F +
Sbjct: 22 DVVLGNTLLDLYANCGSLPDARRLFDRLPARSIVSWNAMMLGYAENKEAESALELFSLM- 80
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM-GLIGDVFVSNALIAMYGKCAF 250
+ +P + TF +KAC +A+ G + G AK+ G D+FV+N+L+ MY KC
Sbjct: 81 -EKRCQPTSRTFVAALKACAVLAEAEEGRELEGKVAKIYGFQWDLFVANSLVDMYAKCGS 139
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ + ++F+ M ++VSWNS+I G+++N + +L + M
Sbjct: 140 MVDSRRVFDGMRRHDVVSWNSLISGYADNDQGEAALELFVPM 181
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 90/174 (51%), Gaps = 6/174 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+ACG ++IG+ +H + D +I T L+ Y CG +D+ +VF S+ T++
Sbjct: 197 LKACGCVGALDIGRTLHGKIR-DLGLDGDVVIATSLVDFYGKCGSMVDAEQVFSSIVTKD 255
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVEL-SSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
+ WNAL++G+++ + F + +S ++PD TF C++ AC G+ D G
Sbjct: 256 IVAWNALLTGYSRQGDTEALFQAFDRMMTSRPRVRPDGVTFLCLLTACSHSGLVDQG-KR 314
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
M + GL + + L+ + G+ +EE V + + MP N VSW +++
Sbjct: 315 YFEAMKSIHGLDPGMEHYHCLVDILGRSNRLEEAVAMVKEMPVVANTVSWTTVL 368
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H AA DV + N L+ +Y C + + +LF+ +P R++VSWN+++ G++EN
Sbjct: 10 IHQQAANKSCDLDVVLGNTLLDLYANCGSLPDARRLFDRLPARSIVSWNAMMLGYAEN 67
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 105/179 (58%), Gaps = 2/179 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+ AC K+++ +++H + AS++F+ D ++ LI +Y CG +++ +VFD ++
Sbjct: 56 AFITACAQSKNLDDARKIHAHL-ASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRN 114
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+++ W +L++G+ +N++ + + + + KP+ FTF ++KA G AD G G
Sbjct: 115 KDMVSWTSLIAGYAQNDMPAEAIGLLPGMLK-GRFKPNGFTFASLLKAVGAYADSGIGGQ 173
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H +A K DV+V +AL+ MY +C ++ +F+ + +N VSWN++I GF+ G
Sbjct: 174 IHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKG 232
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 92/183 (50%), Gaps = 2/183 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+A G D IG ++H L + + D + + L+ MY+ CG + VFD L ++
Sbjct: 158 LLKAVGAYADSGIGGQIHAL-AVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSK 216
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WNAL+SGF + L +F E+ + + +FT+ + A GI + G V
Sbjct: 217 NGVSWNALISGFARKGDGETALMVFAEMQRNG-FEATHFTYSSIFSALAGIGALEQGKWV 275
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K FV N ++ MY K + + K+FE + ++LV+WNS++ F++ G
Sbjct: 276 HAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLG 335
Query: 283 CES 285
E+
Sbjct: 336 KEA 338
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
EL P + I AC ++ +H A GD F+ N+LI +Y KC V E
Sbjct: 46 ELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEA 105
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F+ M +++VSW S+I G+++N E+ LL M+ F P+ T ++L
Sbjct: 106 HKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGR--FKPNGFTFASLL 159
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E GK VH + S Q F+ NT ++ MY+ G +D+R+VF+ + ++L WN++++
Sbjct: 269 LEQGKWVHAHMIKSRQKLTAFVGNT-MLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLT 327
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
F + L + +S F E+ + + + +F C++ AC V G M + L
Sbjct: 328 AFAQYGLGKEAVSHFEEMRK-SGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLE 386
Query: 233 GDVFVSNALIAMYGKCAFVE-EMVKLFEVMPERNLVSWNSIICG 275
++ ++ + G+ + +V +F++ E W +++
Sbjct: 387 PEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAA 430
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 112/207 (54%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC K G ++H L N + NT ++ MY+ CG +++ +FD ++ ++
Sbjct: 379 LTACSAIKGYLEGIQLHGLAVKCGLDFNICVANT-ILDMYAKCGALMEACLIFDDMEIKD 437
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WNA+++ +NE + L++FV + T ++PD++TF V+KAC G + +G VH
Sbjct: 438 AVSWNAIIAAHEQNEHVEETLALFVSMLRST-MEPDDYTFGSVVKACAGKKALNYGMEVH 496
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G K G+ D FV +A+I MY KC + E K+ E + ER VSWNSII GFS
Sbjct: 497 GRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGE 556
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +M+ + G IPD T TVL
Sbjct: 557 NALSYFSRML--QVGVIPDNFTYATVL 581
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 107/192 (55%), Gaps = 2/192 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +++AC +K + G VH V S D+ + + +I MY CG +++ ++ + L+
Sbjct: 477 GSVVKACAGKKALNYGMEVHGRVIKSG-MGLDWFVGSAIIDMYCKCGMLVEAEKIHERLE 535
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R WN+++SGF+ + + LS F + + PDNFT+ V+ C +A V G
Sbjct: 536 ERTTVSWNSIISGFSSEKQGENALSYFSRMLQ-VGVIPDNFTYATVLDICANLATVELGK 594
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG K+ L DV++++ ++ MY KC +++ +FE P+R+ V+W+++IC ++ +G
Sbjct: 595 QIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHG 654
Query: 281 FSCESFDLLIKM 292
++ L +M
Sbjct: 655 LGEDAIKLFEEM 666
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 88/167 (52%), Gaps = 3/167 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I +I Y+ G ++ +FDS+ R++ WN+++S + +N + + IF ++
Sbjct: 103 DVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMR 162
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
E++ D TF V+KAC GI D G G VH +A +MG DV AL+ MY C +
Sbjct: 163 L-LEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKL 221
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEG 298
+ +F MPERN V W+++I G+ N E L M+ +EG
Sbjct: 222 DHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVML--DEG 266
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 9/210 (4%)
Query: 91 LHNADLKEATGV-------LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMY 143
L+ L E GV ++C E+G ++H + T F D I+ T + MY
Sbjct: 258 LYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAY-ALKTNFGYDNIVGTATLDMY 316
Query: 144 SLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTF 203
+ C +D+R+VF++ NAL+ G+ + + + L IF L + L D +
Sbjct: 317 AKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQK-SYLDFDEISL 375
Query: 204 PCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 263
+ AC I G +HG+A K GL ++ V+N ++ MY KC + E +F+ M
Sbjct: 376 SGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEI 435
Query: 264 RNLVSWNSIICGFSENGFSCESFDLLIKMM 293
++ VSWN+II +N E+ L + M+
Sbjct: 436 KDAVSWNAIIAAHEQNEHVEETLALFVSML 465
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 93/189 (49%), Gaps = 2/189 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
V+L+AC +D +G +VH L + F +D + T L+ MYS C + +F +
Sbjct: 174 AVVLKACTGIEDYGLGLQVHCL-AIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMP 232
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN W+A+++G+ +N+ +T+ L ++ ++ D + TF ++C G++ G+
Sbjct: 233 ERNSVCWSAVIAGYVRNDRFTEGLKLY-KVMLDEGMGVSQATFASAFRSCAGLSAFELGT 291
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H A K D V A + MY KC + + K+F P S N++I G++
Sbjct: 292 QLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQD 351
Query: 281 FSCESFDLL 289
E+ ++
Sbjct: 352 QVLEALEIF 360
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 192 SDTELKP-DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
S ++ P TF + + C + + G H G + VFVSN L+ Y KC
Sbjct: 29 SSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLN 88
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+ +F+ MP+R+++SWN++I G++ G
Sbjct: 89 LNYAFNVFDKMPQRDVISWNTMIFGYAGVG 118
>gi|302785117|ref|XP_002974330.1| hypothetical protein SELMODRAFT_50864 [Selaginella moellendorffii]
gi|300157928|gb|EFJ24552.1| hypothetical protein SELMODRAFT_50864 [Selaginella moellendorffii]
Length = 720
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 115/212 (54%), Gaps = 7/212 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT- 161
+L AC ++E GKR+H + +F D ++N L+ +Y +CG +++ VF S++
Sbjct: 203 VLDACSSAMNLEEGKRIHARI-VEGKFEIDTVVNNTLLDLYGMCGCLEEAKAVFHSMQEQ 261
Query: 162 -RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF-- 218
R++ WN+++ N+ + L +F E+ + D ++ + AC + G
Sbjct: 262 GRDVVSWNSIIRAHLHNDQPKEALGLFFEMQEACGPRQDRVSYVSALDACSAMGSDGLVH 321
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G +HG+ + DV+V AL+ MYG+C V E ++F+VMP +N V+W S+I G+S
Sbjct: 322 GKTLHGLILANRIHIDVYVGTALVTMYGRCGDVVEAKQVFDVMPSKNAVTWTSMIRGYST 381
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
NGF+ E+ ++ KM +EG D I V V+
Sbjct: 382 NGFAREAVEVFQKME--QEGCRADKIVYVAVM 411
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 11/211 (5%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC K + G+ VH V+ F +D ++ LI MYS C P D+R VFD + R+
Sbjct: 1 LDACVSLKALSDGRDVHASVT-RHGFGSDLVLGNALINMYSKCSSPADARNVFDGMTVRD 59
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA--DVGFGSG 221
WN +++ + +N + + +F E++ + PD +T + C G++ D G G
Sbjct: 60 SVSWNTMIATYARNGFGEEAVEVFHEMAL-VGIPPDKYTLISALDGCCGLSCPDRGLKKG 118
Query: 222 --VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H +G + DV + LI MYGK V E +LF+ M R ++W +I + +N
Sbjct: 119 REIHRRIQSIGFMSDVALQTGLIKMYGKFGEVIEARRLFDGMSRRVALTWARMITAYGQN 178
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
GF E+ +L ++ +PD + +VL
Sbjct: 179 GFGNEAIELYKQI-----DVVPDKVIFASVL 204
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 129/263 (49%), Gaps = 27/263 (10%)
Query: 72 TLCEESKSLNKALSLLQENLHNADLKEATGVLLQ---ACGHEKD---------------- 112
++ E+ + + S+++ +LHN KEA G+ + ACG +D
Sbjct: 257 SMQEQGRDVVSWNSIIRAHLHNDQPKEALGLFFEMQEACGPRQDRVSYVSALDACSAMGS 316
Query: 113 --IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNAL 170
+ GK +H L+ A+ + D + T L+TMY CG +++++VFD + ++N W ++
Sbjct: 317 DGLVHGKTLHGLILAN-RIHIDVYVGTALVTMYGRCGDVVEAKQVFDVMPSKNAVTWTSM 375
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
+ G++ N + + +F ++ + + D + V++A G+ DV + +H +++G
Sbjct: 376 IRGYSTNGFAREAVEVFQKMEQEG-CRADKIVYVAVMEASRGVEDVKMAAKIHSRLSELG 434
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE--RNLVSWNSIICGFSENGFSCESFDL 288
D + ++LIAM+GKC VE ++F+ M E R +WN++I +S G +L
Sbjct: 435 WCSDSAIQSSLIAMHGKCGSVEAARRVFDAMEEKSRGSPAWNAMIAAYSRRGDKEAVLEL 494
Query: 289 LIKMMGCEEGFIPDVITVVTVLP 311
M PD T + +L
Sbjct: 495 FQAMQAAS--VRPDRATFLGLLA 515
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 7/185 (3%)
Query: 110 EKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNA 169
++ ++ G+ +H + S F +D + T LI MY G +++RR+FD + R W
Sbjct: 112 DRGLKKGREIHRRIQ-SIGFMSDVALQTGLIKMYGKFGEVIEARRLFDGMSRRVALTWAR 170
Query: 170 LVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM 229
+++ + +N + + ++ ++ ++ PD F V+ AC ++ G +H +
Sbjct: 171 MITAYGQNGFGNEAIELYKQI----DVVPDKVIFASVLDACSSAMNLEEGKRIHARIVEG 226
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE--RNLVSWNSIICGFSENGFSCESFD 287
D V+N L+ +YG C +EE +F M E R++VSWNSII N E+
Sbjct: 227 KFEIDTVVNNTLLDLYGMCGCLEEAKAVFHSMQEQGRDVVSWNSIIRAHLHNDQPKEALG 286
Query: 288 LLIKM 292
L +M
Sbjct: 287 LFFEM 291
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
ST D ++ T L+ + G ++RRVFD L R++ W +++ + + + +
Sbjct: 534 STGMETDSLVGTALLNTLTRSGKVGEARRVFDRLDKRDVVSWTSMMVAYASHGSSLEAID 593
Query: 186 IFVELSSDTELKPDNFTFPCVIKAC 210
+F E+ ++PD F V+ AC
Sbjct: 594 LFQEMQLQG-MEPDEVAFLAVLFAC 617
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 115/197 (58%), Gaps = 8/197 (4%)
Query: 117 KRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
+++H L+ QFS F+I T+LI S G +R+VFD L +F WNA++ G++
Sbjct: 38 RQIHARLLVLGLQFSG-FLI-TKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYS 95
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+N + D L ++ ++ + PD+FTFP ++KACGG++ + G VH ++G DV
Sbjct: 96 RNNHFQDALLMYSKMQL-ARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADV 154
Query: 236 FVSNALIAMYGKCAFVEEMVKLFE--VMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
FV N LIA+Y KC + +FE +PER +VSW +I+ +++NG E+ ++ +M
Sbjct: 155 FVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMR 214
Query: 294 GCEEGFIPDVITVVTVL 310
+ PD + +V+VL
Sbjct: 215 KMD--VKPDCVALVSVL 229
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 109/201 (54%), Gaps = 6/201 (2%)
Query: 111 KDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNA 169
+D+E G+ +H ++ + D +I+ L TMY+ CG ++ +FD +K+ NL WNA
Sbjct: 236 QDLEQGRSIHASVMKMGLETEPDLLIS--LNTMYAKCGQVATAKILFDKMKSPNLILWNA 293
Query: 170 LVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM 229
++SG+ KN D + +F E+ + +++PD + I AC + + + ++
Sbjct: 294 MISGYAKNGFAKDAIDLFHEMI-NKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRS 352
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL 289
DVF+S+ALI M+ KC VE +F+ +R++V W+++I G+ +G + E+ L
Sbjct: 353 DYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLY 412
Query: 290 IKMMGCEEGFIPDVITVVTVL 310
M +G P+ +T + +L
Sbjct: 413 RAME--RDGVHPNDVTFLGLL 431
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-- 160
LL+ACG +++G+ VH V F D + LI +Y+ C +R VF+ L
Sbjct: 125 LLKACGGLSHLQMGRFVHAQV-FRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLP 183
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R + W A+VS + +N + L IF ++ ++KPD V+ A + D+ G
Sbjct: 184 ERTIVSWTAIVSAYAQNGEPVEALEIFSQMRK-MDVKPDCVALVSVLNAFTCLQDLEQGR 242
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H KMGL + + +L MY KC V LF+ M NL+ WN++I G+++NG
Sbjct: 243 SIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ ++ DL +M+ + PD I++ + +
Sbjct: 303 FAKDAIDLFHEMI--NKDVRPDTISITSAI 330
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 101/178 (56%), Gaps = 2/178 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC K++ + +H +S S + F++N+ LI MY CG D+R VFD + TR
Sbjct: 68 IITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNS-LIHMYCKCGAVSDARHVFDGIPTR 126
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W L++G+ +N++ + L + ++ +P FTF +KA G G G +
Sbjct: 127 DVVSWTYLITGYAQNDMPAEALGLLPDMLR-ARFRPSGFTFTSFLKAAGACGGRGIGEQM 185
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H +A K L DV+V +AL+ MY +C ++ +++F+ + +N VSWN++I GF+ G
Sbjct: 186 HALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKG 243
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 2/183 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+A G IG+++H L + D + + L+ MY+ C + RVFD L ++
Sbjct: 169 FLKAAGACGGRGIGEQMHAL-AVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSK 227
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WNAL++GF + L F E+ + +FT+ V A I + G V
Sbjct: 228 NEVSWNALIAGFARKGDGETTLMKFAEMQRNG-FGATHFTYSSVFSALARIGALEQGRWV 286
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G FV+N ++ MY K + + K+F+ + +R+LV+WN+++ F++ G
Sbjct: 287 HAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLG 346
Query: 283 CES 285
E+
Sbjct: 347 KEA 349
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
EL P + +I AC ++ +H ++ L GD F+ N+LI MY KC V +
Sbjct: 57 ELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDA 116
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ +P R++VSW +I G+++N E+ LL M+ F P T + L
Sbjct: 117 RHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRAR--FRPSGFTFTSFL 170
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E G+ VH + S Q F+ NT ++ MY+ G +D+R+VFD + R+L WN +++
Sbjct: 280 LEQGRWVHAHMIKSGQKLTAFVANT-ILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLT 338
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
F + L + ++ F E+ ++ + TF V+ AC V G M +
Sbjct: 339 AFAQYGLGKEAVAHFEEIRK-YGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVE 397
Query: 233 GDVFVSNALIAMYGKCAFVEE-MVKLFEVMPERNLVSWNSII--CGFSENG 280
++ + + + G+ ++E ++ +F++ E W +++ C +N
Sbjct: 398 PEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNA 448
>gi|255541646|ref|XP_002511887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549067|gb|EEF50556.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 478
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 116/209 (55%), Gaps = 4/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
VL +AC IEIG+++H LV F + ++N+ L+ +Y CG ++R VFD +
Sbjct: 125 VLFRACLELNGIEIGRQLHCLV-VKLGFQLNCLVNSALVDLYGKCGLATEARCVFDDVMY 183
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++L WN ++S + N L + L++F +L L D FTF ++ +C + G
Sbjct: 184 KDLVLWNVMLSCYALNSLAEEALTVF-KLMQLENLIGDGFTFSSMLNSCATLGSWELGRQ 242
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG+ K+ D+ V++ ++ MY K ++E+ K F+ M +N+VSWN+++ + G
Sbjct: 243 IHGLICKLSFDLDILVASGIVNMYAKNEYIEDARKAFDCMTAKNVVSWNTMVVAYGRQGD 302
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ LL +M+ E F PD +T+ ++L
Sbjct: 303 GKEAMKLLKEML--LEDFAPDELTLASIL 329
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 117/241 (48%), Gaps = 8/241 (3%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQF 129
+ +L EE+ ++ K + L ENL ++ +L +C E+G+++H L+ F
Sbjct: 198 LNSLAEEALTVFKLMQL--ENLIGDGFTFSS--MLNSCATLGSWELGRQIHGLI-CKLSF 252
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE 189
D ++ + ++ MY+ + D+R+ FD + +N+ WN +V + + + + + E
Sbjct: 253 DLDILVASGIVNMYAKNEYIEDARKAFDCMTAKNVVSWNTMVVAYGRQGDGKEAMKLLKE 312
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
+ + + PD T ++ +CG ++ VH K GL + + NA+I Y KC
Sbjct: 313 MLLE-DFAPDELTLASILSSCGSVSASCEIMQVHVYVVKFGLQSFLSIGNAMINAYSKCG 371
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
+K F +PE NLV+W S+I G++ N + + KM+ G PD I + V
Sbjct: 372 RAASALKSFNSVPEPNLVTWTSLISGYAFNSLPKDGIKMFEKML--SAGVRPDQIAFLGV 429
Query: 310 L 310
L
Sbjct: 430 L 430
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 91/186 (48%), Gaps = 10/186 (5%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT------KNELYTDVL 184
N + +++ +Y C D+ ++FD + RN+ WN ++ G K LYT
Sbjct: 47 NVLSLQNKILDVYVKCKEFKDAHKLFDEMTVRNVVTWNTVICGLVNCGNNYKPCLYTG-F 105
Query: 185 SIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAM 244
S F ++ D E+ D T + +AC + + G +H + K+G + V++AL+ +
Sbjct: 106 SYFKKMLLD-EVGFDPITLNVLFRACLELNGIEIGRQLHCLVVKLGFQLNCLVNSALVDL 164
Query: 245 YGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVI 304
YGKC E +F+ + ++LV WN ++ ++ N + E+ + K+M E I D
Sbjct: 165 YGKCGLATEARCVFDDVMYKDLVLWNVMLSCYALNSLAEEALTVF-KLMQLEN-LIGDGF 222
Query: 305 TVVTVL 310
T ++L
Sbjct: 223 TFSSML 228
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 214 ADVGFGSG---VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
A GF G VH K+GL + + N ++ +Y KC ++ KLF+ M RN+V+WN
Sbjct: 25 ATTGFLQGGIQVHAHLVKLGLYNVLSLQNKILDVYVKCKEFKDAHKLFDEMTVRNVVTWN 84
Query: 271 SIICGFSENGFSCE-----SFDLLIKMMGCEEGFIPDVITVV 307
++ICG G + + F KM+ E GF P + V+
Sbjct: 85 TVICGLVNCGNNYKPCLYTGFSYFKKMLLDEVGFDPITLNVL 126
>gi|357487543|ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
gi|355515394|gb|AES97017.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
Length = 565
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 124/235 (52%), Gaps = 9/235 (3%)
Query: 80 LNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
L KA+ QEN D K +L+AC + + GK+VH V F D I L
Sbjct: 69 LYKAIITEQENELFPD-KHTYPFVLKACAYLFSLFEGKQVHAHV-LKLGFELDTYICNSL 126
Query: 140 ITMYSLCGFPLDSRRVFDSL-KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
I Y+ CG+ +R+VFD + + RN+ WN ++ + K Y VL +F E+ E P
Sbjct: 127 IHFYASCGYLETARKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEMMKVYE--P 184
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKM---GLIGDVFVSNALIAMYGKCAFVEEMV 255
D +T VI+ACGG+ + G VH K ++ DV V+ L+ MY KC +E
Sbjct: 185 DCYTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAK 244
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++FE M R++ SWNSII GF+ +G + + D ++M+ E+ +P+ IT V VL
Sbjct: 245 QVFEGMSYRDVSSWNSIILGFAVHGKAKAALDYFVRMVKVEK-IVPNSITFVGVL 298
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 90/163 (55%), Gaps = 11/163 (6%)
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTD---VLSIFVELSSDTELKPDNFTFPCVIKAC 210
++ ++ T N F WN L+ ++K+ L+ +L + + EL PD T+P V+KAC
Sbjct: 36 QILRTIHTPNSFTWNILIQSYSKSTLHKQKAILLYKAIITEQENELFPDKHTYPFVLKAC 95
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE-RNLVSW 269
+ + G VH K+G D ++ N+LI Y C ++E K+F+ M E RN+VSW
Sbjct: 96 AYLFSLFEGKQVHAHVLKLGFELDTYICNSLIHFYASCGYLETARKVFDRMCEWRNVVSW 155
Query: 270 NSIICGFSENGFSCESFDLLIKMMGCE--EGFIPDVITVVTVL 310
N +I +++ G +D+++ +M CE + + PD T+ +V+
Sbjct: 156 NVMIDSYAKVG----DYDIVL-IMFCEMMKVYEPDCYTMQSVI 193
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 6/176 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELV--SASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+++ACG + +G VH V D ++NT L+ MY CG +++VF+ +
Sbjct: 192 VIRACGGLGSLSLGMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMS 251
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGF 218
R++ WN+++ GF + L FV + ++ P++ TF V+ AC G+ D G
Sbjct: 252 YRDVSSWNSIILGFAVHGKAKAALDYFVRMVKVEKIVPNSITFVGVLSACNHSGMVDEGL 311
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSII 273
M + + + L+ +Y + ++E + + MP + + V W S++
Sbjct: 312 MY-FEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEALNVVSEMPIKPDAVIWRSLL 366
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 109/210 (51%), Gaps = 8/210 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C + + GK VH +T +D + T LI MY CG +RRVFD +K R
Sbjct: 269 ILDGCSTPEALAWGKAVHAQC-MNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVR 327
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W ++ G+ +N D +F + + ++PD T+ +I AC AD+ +
Sbjct: 328 DVVSWTVMIRGYAENSNIEDAFGLFATMQEEG-IQPDRITYIHIINACASSADLSLAREI 386
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G D+ V AL+ MY KC +++ ++F+ M R++VSW+++I + ENG
Sbjct: 387 HSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCG 446
Query: 283 CESFDL--LIKMMGCEEGFIPDVITVVTVL 310
E+F+ L+K E PDV+T + +L
Sbjct: 447 EEAFETFHLMKRNNVE----PDVVTYINLL 472
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 114/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC D+ + + +H V F D +++T L+ MY+ CG D+R+VFD++ R
Sbjct: 370 IINACASSADLSLAREIHSQV-VRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRR 428
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+A++ + +N + F L ++PD T+ ++ ACG + + G +
Sbjct: 429 DVVSWSAMIGAYVENGCGEEAFETF-HLMKRNNVEPDVVTYINLLNACGHLGALDLGMEI 487
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ A K L+ + V NALI M K +E +FE M +R++V+WN +I G+S +G +
Sbjct: 488 YTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNA 547
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL +M+ +E F P+ +T V VL
Sbjct: 548 REALDLFDRML--KERFRPNSVTFVGVL 573
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 107/209 (51%), Gaps = 4/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++L AC +++GK H V F +DF I T L++MY G +R+VFD L
Sbjct: 167 IVLDACSSPAGLKLGKEFHAQV-IKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYK 225
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ +N ++ G+ K+ +F + + KP+ +F ++ C + +G
Sbjct: 226 RDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEG-FKPNRISFLSILDGCSTPEALAWGKA 284
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH GL+ DV V+ ALI MY C +E ++F+ M R++VSW +I G++EN
Sbjct: 285 VHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSN 344
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F L M EEG PD IT + ++
Sbjct: 345 IEDAFGLFATMQ--EEGIQPDRITYIHII 371
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 129/230 (56%), Gaps = 5/230 (2%)
Query: 81 NKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLI 140
N L L E ++ D + L Q C +D +GK+V + + S + N + +NT LI
Sbjct: 46 NDVLHRLGEGSNHIDSRTYVK-LFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNT-LI 103
Query: 141 TMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDN 200
++S+CG L++R+ FDS++ + + WNA+++G+ + + ++F ++ D ++P
Sbjct: 104 KLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMV-DEAMEPSI 162
Query: 201 FTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV 260
TF V+ AC A + G H K+G + D + AL++MY K ++ ++F+
Sbjct: 163 ITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDG 222
Query: 261 MPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +R++ ++N +I G++++G ++F L +M +EGF P+ I+ +++L
Sbjct: 223 LYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQ--QEGFKPNRISFLSIL 270
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 114/200 (57%), Gaps = 4/200 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
DI+ K VH V + F + + +L+ Y+ G P +R VFD + RN+ +N ++
Sbjct: 47 DIKTLKNVHSKV-FNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMI 105
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
+ N LY D L +F ++ S PD++T+PCV+KAC ++ G +HG K+GL
Sbjct: 106 RSYMNNHLYDDALLVFRDMVSGG-FSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGL 164
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
++FV N LIA+YGKC + E + + M +++VSWNS++ G+++N ++ D+ +
Sbjct: 165 DLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICRE 224
Query: 292 MMGCEEGFIPDVITVVTVLP 311
M G + PD T+ ++LP
Sbjct: 225 MDGVRQK--PDACTMASLLP 242
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 83/156 (53%), Gaps = 3/156 (1%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
+F +L+ ++L WN ++S + KN + + +++++ E++PD T V++ACG ++
Sbjct: 258 MFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGK-CEVEPDAITCASVLRACGDLS 316
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+ G +H + L ++ + N+LI MY +C +E+ ++F+ M R++ SW S+I
Sbjct: 317 ALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLIS 376
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ G + L +M G PD I V +L
Sbjct: 377 AYGMTGQGYNAVALFTEMQN--SGQSPDSIAFVAIL 410
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 7/202 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG + +G+R+HE V N + N+ LI MY+ CG D++RVFD +K R
Sbjct: 308 VLRACGDLSALLLGRRIHEYVERKKLCPNMLLENS-LIDMYARCGCLEDAKRVFDRMKFR 366
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +L+S + + +++F E+ + + PD+ F ++ AC + G
Sbjct: 367 DVASWTSLISAYGMTGQGYNAVALFTEMQNSGQ-SPDSIAFVAILSACSHSGLLNEGKFY 425
Query: 223 HGMAAKMGLIGDVFVSNA-LIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICG---FS 277
I + A L+ + G+ V+E + + MP + N W +++ +S
Sbjct: 426 FKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYS 485
Query: 278 ENGFSCESFDLLIKMMGCEEGF 299
+ D L+++ E G+
Sbjct: 486 NMDIGILAADKLLQLAPEESGY 507
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 122/213 (57%), Gaps = 12/213 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+A + K ++ GK +H+ V + ND + LI++Y C ++ VFD ++
Sbjct: 9 LLRASVNSKSLKQGKVLHQKV-VTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIE-- 65
Query: 163 NLFQW---NALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
N F+ N L++G+T+N +Y + L +F +L LKPD++T+P V+KACGG+ V G
Sbjct: 66 NPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLG 125
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H K GL+ D+ V ++L+ MY KC E VKLF+ MP++++ WN++I + ++
Sbjct: 126 QMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQS 185
Query: 280 GFSCESFDLLIKMMGCEE--GFIPDVITVVTVL 310
G F+ ++ G GF PD +T+ T +
Sbjct: 186 G----KFEEALRYFGMMRRFGFEPDSVTITTAI 214
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 4/205 (1%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC + GK VH + + D +N+ L+ +Y CG + +F +
Sbjct: 317 ACSQSAQLLEGKFVHGYI-IRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTV 375
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
WN ++SG+ D L +F E+S + ++PD TF V+ AC +A + G +H +
Sbjct: 376 SWNVMISGYVTEGKLFDALRLFGEMSK-SFVEPDAITFTSVLAACSQLAALEKGREIHNL 434
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
+ L + V AL+ MY KC VEE +F+ +PER+LVSW S+I + +G E+
Sbjct: 435 IVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEA 494
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
+L +M+ + PD +T + +L
Sbjct: 495 LELFAEML--QSNVKPDRVTFLAIL 517
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 97/183 (53%), Gaps = 4/183 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG + + +G+ +H + D ++ + L+ MY+ C + ++FD + +
Sbjct: 112 VLKACGGLRRVVLGQMIHTCL-VKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDK 170
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN ++S + ++ + + L F + +PD+ T I +C + D+ G +
Sbjct: 171 DVACWNTVISCYYQSGKFEEALRYF-GMMRRFGFEPDSVTITTAISSCARLLDLDRGREI 229
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII--CGFSENG 280
H G D FVS AL+ MYGKC +E +++FE MP + +V+WNS+I GF +G
Sbjct: 230 HKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDG 289
Query: 281 FSC 283
SC
Sbjct: 290 ISC 292
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 8/209 (3%)
Query: 104 LQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ +C D++ G+ +H ELV++ F D ++ L+ MY CG + VF+ + +
Sbjct: 214 ISSCARLLDLDRGREIHKELVNSG--FRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNK 271
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN++++G+ + +F + S+ +KP T + AC A + G V
Sbjct: 272 TVVAWNSMINGYGFKGDGISCIQLFKRMYSEG-VKPTLTTLTSTLMACSQSAQLLEGKFV 330
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + + D+F++++L+ +Y KC VE +F++MP+ VSWN +I G+ G
Sbjct: 331 HGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEG-- 388
Query: 283 CESFDLLIKMMGCEEGFI-PDVITVVTVL 310
+ FD L + F+ PD IT +VL
Sbjct: 389 -KLFDALRLFGEMSKSFVEPDAITFTSVL 416
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 5/163 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E G+ +H L+ N+ ++ L+ MY+ CG ++ VF L R
Sbjct: 415 VLAACSQLAALEKGREIHNLI-VERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPER 473
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
+L W ++++ + + + L +F E+ + +KPD TF ++ AC G+ D G
Sbjct: 474 DLVSWTSMITAYGSHGRVYEALELFAEMLQ-SNVKPDRVTFLAILSACSHAGLVDDGL-Y 531
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 263
+ M G+I + + LI + G+ + E ++ + PE
Sbjct: 532 HFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPE 574
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + IG+ +H V + + + L+ MYS CG S +F + ++
Sbjct: 457 LPACASMAAMRIGQELHGYV-LKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKD 515
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WN+++S F +N + L +F ++ + +K +N T ++ AC G+ + +G +H
Sbjct: 516 EVTWNSMISSFAQNGEPEEALDLFRQMIMEG-VKYNNVTISSILSACAGLPAIYYGKEIH 574
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G+ K + D+F +ALI MYGKC +E +++FE MPE+N VSWNSII + +G
Sbjct: 575 GIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVK 634
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
ES DLL M EEGF D +T + ++
Sbjct: 635 ESVDLLCCMQ--EEGFKADHVTFLALI 659
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 107/209 (51%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++++C + +G+ VH A D + + LI MY+ G +R VFD + R
Sbjct: 153 VVKSCAALGALHLGRLVHRTTRA-LGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDER 211
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN ++ G+ K + +F + + + P+ T C + C AD+ G +
Sbjct: 212 DCVLWNVMMDGYVKAGDVASAVGLFRVMRA-SGCDPNFATLACFLSVCAAEADLLSGVQL 270
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A K GL +V V+N L++MY KC +EE +LF +MP +LV+WN +I G +NG
Sbjct: 271 HTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLV 330
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ L M + G PD +T+ ++LP
Sbjct: 331 DDALRLFCDMQ--KSGLQPDSVTLASLLP 357
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 10/207 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFS----NDFIINTRLITMYSLCGFPLDSRRVFDS 158
LL+ C + +G R+H S + TRL+ MY L D+ VF S
Sbjct: 42 LLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFRDAVAVFSS 101
Query: 159 LK---TRNLFQWNALVSGFTKNELYTDVLSIFVEL-SSDTELKPDNFTFPCVIKACGGIA 214
L WN L+ GFT + + +V++ + + +PD T P V+K+C +
Sbjct: 102 LPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCAALG 161
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+ G VH +GL D++V +ALI MY ++ ++F+ M ER+ V WN ++
Sbjct: 162 ALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMD 221
Query: 275 GFSENGFSCESFDL--LIKMMGCEEGF 299
G+ + G + L +++ GC+ F
Sbjct: 222 GYVKAGDVASAVGLFRVMRASGCDPNF 248
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL A + GK +H + + + F+++ L+ +Y C ++ VFD+ K+
Sbjct: 355 LLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSA-LVDIYFKCRDVRMAQNVFDATKSI 413
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ + ++SG+ N + + +F L + +KP+ + AC +A + G +
Sbjct: 414 DVVIGSTMISGYVLNRMSEAAVKMFRYLLA-LGIKPNAVMVASTLPACASMAAMRIGQEL 472
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K G +V +AL+ MY KC ++ +F M ++ V+WNS+I F++NG
Sbjct: 473 HGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEP 532
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL +M+ EG + +T+ ++L
Sbjct: 533 EEALDLFRQMI--MEGVKYNNVTISSIL 558
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 98/208 (47%), Gaps = 4/208 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L C E D+ G ++H L + + + L++MY+ C ++ R+F + +
Sbjct: 255 LSVCAAEADLLSGVQLHTL-AVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDD 313
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L WN ++SG +N L D L +F ++ + L+PD+ T ++ A + G +H
Sbjct: 314 LVTWNGMISGCVQNGLVDDALRLFCDMQK-SGLQPDSVTLASLLPALTELNGFKQGKEIH 372
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G + DVF+ +AL+ +Y KC V +F+ ++V +++I G+ N S
Sbjct: 373 GYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSE 432
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ + ++ G P+ + V + LP
Sbjct: 433 AAVKMFRYLLAL--GIKPNAVMVASTLP 458
>gi|225217042|gb|ACN85326.1| EMB2261 putative [Oryza brachyantha]
Length = 626
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 115/210 (54%), Gaps = 6/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G ++ A G+ K G++ H V + + I+ + + MY+ CG +++R+VFD +
Sbjct: 247 GSMMTALGNLKRENQGRQAHAQV-VTRGLCGNVIVESSTLDMYAKCGSMVEARKVFDRML 305
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN W AL+ G+ +N Y V+++F E+ D ++ V++AC G++ V G
Sbjct: 306 VRNEVSWCALLGGYCQNGEYEKVVALFREMDKK---DGDWYSLGTVLRACAGLSSVKPGK 362
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H +MG DV V +AL+ +Y KC V+ +FE RN ++WN++I GF++NG
Sbjct: 363 EIHCRFLRMGGWRDVVVESALVDLYAKCGAVDYAYTVFEASTVRNTITWNAMIGGFAQNG 422
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L +M+ EG PD I+ V+VL
Sbjct: 423 HGERAINLFDRMV--REGPRPDYISFVSVL 450
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 113/234 (48%), Gaps = 9/234 (3%)
Query: 81 NKALSLLQENLHNADL----KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
+AL+ L+ L AD A ++AC +D G +H + F +D I+
Sbjct: 121 RRALASLRSMLAEADDVSPNAHAFSAAVKACSVLRDRNAGACLHGSILVRG-FGDDDIVL 179
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
+ L+ MY P D+++ F+ ++ + + +L+S F +N+ + + + F + +
Sbjct: 180 SALVDMYGHASAPSDAQKAFEEMRAPDGICYTSLISAFVRNDWFEEAVRWFRSMLMMNGV 239
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
+PD TF ++ A G + G H GL G+V V ++ + MY KC + E K
Sbjct: 240 RPDGCTFGSMMTALGNLKRENQGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGSMVEARK 299
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ M RN VSW +++ G+ +NG E L + M ++G D ++ TVL
Sbjct: 300 VFDRMLVRNEVSWCALLGGYCQNG-EYEKVVALFREMDKKDG---DWYSLGTVL 349
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA-FVEEMVKLFEVMPERNLVSWNSIICGF 276
G +H AA+ GL+ D +++NAL++ Y + + ++ F+ +P R++V+ +SI+ F
Sbjct: 55 LGYCIHARAARGGLLADRYLANALLSFYVRLPRHLPHALRAFDDLPRRDVVAHSSILAAF 114
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDV 303
G + L M+ + P+
Sbjct: 115 LRAGMPRRALASLRSMLAEADDVSPNA 141
>gi|168041820|ref|XP_001773388.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675264|gb|EDQ61761.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 748
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 118/208 (56%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQ KD+ + K+VHE + S + ++ N +L+++Y CG ++R VFD+L +
Sbjct: 11 ILQKVFKHKDLVLAKQVHECIIKSEMEQHPYVAN-KLMSIYIRCGRLQNTREVFDTLVEK 69
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+F W ++ G+ +N + D + ++ ++ + ++P+ TF ++KAC + +G +
Sbjct: 70 NVFNWTIMIGGYAENNHFEDAIEVYNKMRQNG-VQPNEITFFNILKACTSPMALKWGRKI 128
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G D+ + NALI MY +C +++ +F M +R++++WN +I ++G
Sbjct: 129 HDHIRHAGFQSDLRLGNALIHMYARCGSMDDARLVFNGMVDRDIITWNVMIGRLVQHGRG 188
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F L ++M EGF+PD T +++L
Sbjct: 189 HEAFSLFLQMQ--REGFVPDTTTYLSML 214
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 114/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC ++ G+++H+ + + F +D + LI MY+ CG D+R VF+ + R
Sbjct: 112 ILKACTSPMALKWGRKIHDHIRHAG-FQSDLRLGNALIHMYARCGSMDDARLVFNGMVDR 170
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN ++ ++ + S+F+++ + PD T+ ++ A +G+ V
Sbjct: 171 DIITWNVMIGRLVQHGRGHEAFSLFLQMQREG-FVPDTTTYLSMLNANACTGALGWVKEV 229
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A + GL DV V AL+ MY + +++ +F+ M ERN+++WNS+I G +++G
Sbjct: 230 HSHALRAGLESDVRVGTALVHMYARSGSIKDARLVFDKMTERNIITWNSMIGGLAQHGCG 289
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F L +M EG +PD IT V +L
Sbjct: 290 LEAFSLFRQMQ--REGLVPDAITYVNIL 315
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 106/183 (57%), Gaps = 4/183 (2%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
+D + T L+ MY+ G D+R VFD + RN+ WN+++ G ++ + S+F
Sbjct: 238 LESDVRVGTALVHMYARSGSIKDARLVFDKMTERNIITWNSMIGGLAQHGCGLEAFSLFR 297
Query: 189 ELSSDTELKPDNFTFPCVIK-ACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
++ + L PD T+ ++ AC + + VH AAK+GL DV V NAL+ MY K
Sbjct: 298 QMQREG-LVPDAITYVNILNNACASTGALQWVRKVHDDAAKVGLDFDVRVGNALVHMYAK 356
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
C +++ ++F M +R++VSW +I G +++GF E+F L ++M EGF+P++ T +
Sbjct: 357 CGSMDDARRVFYGMVDRDVVSWTVMIGGLAQHGFGREAFSLFLQMQ--REGFVPNLTTYL 414
Query: 308 TVL 310
++L
Sbjct: 415 SIL 417
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 108/198 (54%), Gaps = 4/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E K VH + + + + + LI MY+ CG ++R VFD ++ R++ WNA++
Sbjct: 426 LEWVKEVHTH-AVNAELDSHLRVGNALIHMYAKCGSIENARLVFDRMEDRDIISWNAMIG 484
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G +N + S F+E+ + + PD T ++ AC + VH A + GL
Sbjct: 485 GLAQNGHGREAFSHFLEMQREGFI-PDAATLVSILNACASTRALDRVKEVHSHALEAGLE 543
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
D+ V +AL+ Y KC +++ +FE M R++++WN +I G +++G E+F L ++M
Sbjct: 544 SDLRVGSALVHTYAKCGRIDDARLVFEGMASRDIITWNVMIGGLAQHGREHEAFSLFLQM 603
Query: 293 MGCEEGFIPDVITVVTVL 310
+ GF+PD IT +++L
Sbjct: 604 Q--DVGFVPDAITYLSIL 619
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 4/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L AC ++ ++VH+ +A D + L+ MY+ CG D+RRVF +
Sbjct: 314 ILNNACASTGALQWVRKVHD-DAAKVGLDFDVRVGNALVHMYAKCGSMDDARRVFYGMVD 372
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ W ++ G ++ + S+F+++ + P+ T+ ++ + +
Sbjct: 373 RDVVSWTVMIGGLAQHGFGREAFSLFLQMQREG-FVPNLTTYLSILNGKASTGALEWVKE 431
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH A L + V NALI MY KC +E +F+ M +R+++SWN++I G ++NG
Sbjct: 432 VHTHAVNAELDSHLRVGNALIHMYAKCGSIENARLVFDRMEDRDIISWNAMIGGLAQNGH 491
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F ++M EGFIPD T+V++L
Sbjct: 492 GREAFSHFLEMQ--REGFIPDAATLVSIL 518
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 86/180 (47%), Gaps = 4/180 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + ++ K VH + +D + + L+ Y+ CG D+R VF+ + +R
Sbjct: 517 ILNACASTRALDRVKEVHSH-ALEAGLESDLRVGSALVHTYAKCGRIDDARLVFEGMASR 575
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN ++ G ++ + S+F+++ D PD T+ ++ I + + V
Sbjct: 576 DIITWNVMIGGLAQHGREHEAFSLFLQMQ-DVGFVPDAITYLSILGGNVSIEALEWVKEV 634
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF--EVMPERNLVSWNSIICGFSENG 280
H A + G D VS+AL+ MY KC ++ F ++P+ + +W ++ +G
Sbjct: 635 HRHAVRAGFDTDPRVSSALVHMYTKCGDIDNAKLHFTPNMLPDLDGTAWGDLLDACRNHG 694
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D++T+ +++ D+ VH K + +V+N L+++Y +C ++ ++F
Sbjct: 4 DSYTYVDILQKVFKHKDLVLAKQVHECIIKSEMEQHPYVANKLMSIYIRCGRLQNTREVF 63
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + E+N+ +W +I G++EN ++ ++ KM + G P+ IT +L
Sbjct: 64 DTLVEKNVFNWTIMIGGYAENNHFEDAIEVYNKMR--QNGVQPNEITFFNIL 113
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 114/212 (53%), Gaps = 5/212 (2%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++Q CG E+ +E +R H LV A T ++ RL+ Y CG +R VFD +
Sbjct: 99 AVVQLCGEERSLEAARRAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPP 158
Query: 162 R--NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
R ++ W +L+S + K + + +S+F ++ + PD CV+K + + G
Sbjct: 159 RVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQC-CGVSPDAHAVSCVLKCIASLGSITEG 217
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+HG+ K+GL V+NALIA+Y +C +E+ +++F+ M R+ +SWNS I G+ N
Sbjct: 218 EVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSN 277
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G+ + DL KM EG +TV++VLP
Sbjct: 278 GWHDRAVDLFSKMW--SEGTEISSVTVLSVLP 307
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +G+ VH S T + + L+ MYS C + ++F ++ +
Sbjct: 517 VLPACARSHYWFVGRVVHGY-SVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQK 575
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A+++ +T+ L+ V + E+ D +KPD F V+ G + G V
Sbjct: 576 NVVSWTAMITSYTRAGLFDKVAGLLQEMVLDG-IKPDVFAVTSVLHGFAGDESLKQGKSV 634
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A + G+ + V+NAL+ MY C +EE +F+ + ++++SWN++I G+S N F+
Sbjct: 635 HGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFA 694
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
ESF L M+ F P+ +T+ +LP
Sbjct: 695 NESFSLFSDML---LQFKPNTVTMTCILP 720
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 27/279 (9%)
Query: 38 HSLRSIFK---EKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNA 94
HS IF+ +K+ +S +A + + GL +K LLQE + +
Sbjct: 563 HSTNQIFRNMAQKNVVSWTAMITSYTRAGL---------------FDKVAGLLQEMVLDG 607
Query: 95 ---DLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLD 151
D+ T VL G E ++ GK VH + + L+ MY C +
Sbjct: 608 IKPDVFAVTSVLHGFAGDE-SLKQGKSVHGY-AIRNGMEKLLPVANALMEMYVNCRNMEE 665
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+R VFD + +++ WN L+ G+++N + S+F ++ + KP+ T C++ A
Sbjct: 666 ARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDML--LQFKPNTVTMTCILPAVA 723
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
I+ + G +H A + G + D + SNAL+ MY KC + LF+ + ++NL+SW
Sbjct: 724 SISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTI 783
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+I G+ +G ++ L +M G G PD + +L
Sbjct: 784 MIAGYGMHGCGKDAVALFEQMRG--SGVEPDTASFSAIL 820
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 101/187 (54%), Gaps = 4/187 (2%)
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR-NLFQWNALVSGFTKNELYTDVL 184
S Q D + ++L+ MY CG +RRVFD++ ++ N+ WN ++ G+ K + + L
Sbjct: 336 SVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESL 395
Query: 185 SIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAM 244
+F ++ + + PD C++K ++ G HG K+G V NALI+
Sbjct: 396 LLFEQMH-ELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISF 454
Query: 245 YGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVI 304
Y K ++ V +F+ MP ++ +SWNS+I G + NG + E+ +L ++M +G D
Sbjct: 455 YAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMW--MQGHELDST 512
Query: 305 TVVTVLP 311
T+++VLP
Sbjct: 513 TLLSVLP 519
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 93/178 (52%), Gaps = 21/178 (11%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD-TELK 197
LI +YS CG D+ +VFDS+ R+ WN+ +SG+ N + + +F ++ S+ TE+
Sbjct: 239 LIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEI- 297
Query: 198 PDNFTFPCVIKACGGIADVGF---GSGVHGMAAKMGLIGDV---------FVSNALIAMY 245
+ T V+ AC A++GF G VHG + K GL+ D+ + + L+ MY
Sbjct: 298 -SSVTVLSVLPAC---AELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMY 353
Query: 246 GKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
KC + ++F+ MP + N+ WN I+ G+++ ES L +M E G PD
Sbjct: 354 VKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMH--ELGITPD 409
>gi|255578965|ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
Length = 1530
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 108/194 (55%), Gaps = 3/194 (1%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
K++H L++ ++ N+ + +L+ +Y D+ +FD + +N W+ ++ GF K
Sbjct: 1099 KQLHALITTNSVLYNNLTVANKLLYVYVHHKCLTDAYALFDEMPQKNPVSWSIMIGGFVK 1158
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF 236
+ F EL + ++PDN+T P VIKAC + G +H + K GL D F
Sbjct: 1159 VGEFMQCYKTFKELIRNG-VQPDNYTLPFVIKACRDTVALDMGRLIHCVVLKYGLHLDHF 1217
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCE 296
V AL+ MY KC +E+ LF+VMP ++LV+W +I G++E G + ES L + E
Sbjct: 1218 VCAALVDMYAKCKVIEDAKLLFDVMPSKDLVTWTVMIGGYAECGNAKESLVLFDHLR--E 1275
Query: 297 EGFIPDVITVVTVL 310
EGF+PD I +V+++
Sbjct: 1276 EGFVPDKIAMVSIV 1289
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC +++G+ +H V D + L+ MY+ C D++ +FD + ++
Sbjct: 1187 VIKACRDTVALDMGRLIH-CVVLKYGLHLDHFVCAALVDMYAKCKVIEDAKLLFDVMPSK 1245
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L W ++ G+ + + L +F L + PD ++ AC + + V
Sbjct: 1246 DLVTWTVMIGGYAECGNAKESLVLFDHLREEG-FVPDKIAMVSIVNACAKLGAMNKARFV 1304
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + DV + A+I MY KC V+ ++F+ M +N++SW+++I + +G
Sbjct: 1305 HEYVNRNRFSLDVILGTAMIDMYAKCGDVDSAREIFDNMHHKNVISWSAMIAAYGYHGQG 1364
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L M+ G +P+ IT V++L
Sbjct: 1365 KKALELFPMMLSS--GILPNNITFVSLL 1390
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L++C D E GK+VH + ++ +DF+ T L+ MY+ D+ FD L R
Sbjct: 259 VLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFV-GTALVDMYAKARCLEDAGVAFDRLVNR 317
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++F W ++SG+ + + + F ++ + +KP+ +T + C +A + G +
Sbjct: 318 DIFSWTVIISGYAQTDQAEKAVKYFRQMQREG-IKPNEYTLASCLSGCSHMATLENGRQL 376
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A K G GD+FV +AL+ +YGKC +E +F+ + R++VSWN+II G+S++G
Sbjct: 377 HAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQG 436
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ + M+ EG +PD T + VL
Sbjct: 437 EKALEAFRMML--SEGIMPDEATFIGVL 462
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 106/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C + + GK +H L S ++F+ L+ MYS CG D+ +VF ++
Sbjct: 57 VLKGCANTGSLREGKVLHALALRSGCEIDEFL-GCSLVDMYSKCGTVYDALKVFTKIRNP 115
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+A+++G + + +F L +P+ FT ++ + D+ +G +
Sbjct: 116 DVVAWSAMITGLDQQGHGQEAAELF-HLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSI 174
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K G D VSN LI MY K VE+ K+FE M +LVSWN+++ GF ++
Sbjct: 175 HGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTC 234
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +M+ EGF P++ T ++VL
Sbjct: 235 GRGPRIFYQML--LEGFKPNMFTFISVL 260
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 4/199 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
D+ G+ +H + F +D +++ LI MY D +VF+++ +L WNAL+
Sbjct: 167 DLRYGQSIHGCI-CKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALL 225
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
SGF ++ IF ++ + KP+ FTF V+++C + D FG VH K
Sbjct: 226 SGFYDSQTCGRGPRIFYQMLLEG-FKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSS 284
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
D FV AL+ MY K +E+ F+ + R++ SW II G+++ + ++ +
Sbjct: 285 DDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQ 344
Query: 292 MMGCEEGFIPDVITVVTVL 310
M EG P+ T+ + L
Sbjct: 345 MQ--REGIKPNEYTLASCL 361
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 82/159 (51%), Gaps = 3/159 (1%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+ R+F + +N WNAL++G+ + VL +F ++ + E K FT V+K C
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMK-ECETKFSKFTLSTVLKGCA 62
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
+ G +H +A + G D F+ +L+ MY KC V + +K+F + ++V+W++
Sbjct: 63 NTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSA 122
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+I G + G E+ +L M +G P+ T+ +++
Sbjct: 123 MITGLDQQGHGQEAAELFHLMR--RKGARPNQFTLSSLV 159
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 110/215 (51%), Gaps = 13/215 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLD---SRRVFDSL 159
L+Q C + GK +H + S ++ D + T+++ +Y+ G D +R++F+ +
Sbjct: 77 LIQDCIDSNSFQRGKSIHTQM-ISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEM 135
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK----PDNFTFPCVIKACGGIAD 215
RNL WN ++ + + + Y + IF D LK PDNFTF ++ CG +
Sbjct: 136 PERNLTAWNTMILAYARVDDYMEAWGIF-----DRMLKIGVCPDNFTFASALRVCGALRS 190
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
G VH G GD FV NALI MY KC E +K+F+ M ERN V+WNSII
Sbjct: 191 RDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISA 250
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ G ++ L ++M E+G PD T T+L
Sbjct: 251 EAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLL 285
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 116/212 (54%), Gaps = 8/212 (3%)
Query: 102 VLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
LL C ++++ G+++H L+ A+ + + I+ T L+ MYS CG ++ +F+ +
Sbjct: 283 TLLTLCANQRNDNQGRQIHAHLIRAN--ITKNIIVETELVHMYSECGRLNYAKEIFNRMA 340
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN + WN+++ G+ +N + L +F ++ + +KPD F+ ++ +C ++D G
Sbjct: 341 ERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNG-IKPDCFSLSSMLSSCVSLSDSQKGR 399
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE--VMPERNLVSWNSIICGFSE 278
+H + + + + L+ MY KC ++ K+++ + +RN WNSI+ G++
Sbjct: 400 ELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYAN 459
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G ESF+ ++M+ E DV+T+VT++
Sbjct: 460 KGLKKESFNHFLEML--ESDIEYDVLTMVTIV 489
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 4/208 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+ CG + + GK+VH + A F D + LI MY+ C +VFD + RN
Sbjct: 182 LRVCGALRSRDGGKQVHSKLIACG-FKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERN 240
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELS-SDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
WN+++S + + D L +F+ + S+ ++PD FTF ++ C + G +
Sbjct: 241 QVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQI 300
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + + ++ V L+ MY +C + ++F M ERN SWNS+I G+ +NG +
Sbjct: 301 HAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGET 360
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M G PD ++ ++L
Sbjct: 361 QEALRLFKQMQ--LNGIKPDCFSLSSML 386
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 33/211 (15%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL--K 160
+L +C D + G+ +H + +T + I+ L+ MY+ CG + +V+D K
Sbjct: 385 MLSSCVSLSDSQKGRELHNFIVRNT-MEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKK 443
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVE-LSSDTELKPDNFTFPCVIKACGGIADVGFG 219
RN WN++++G+ L + + F+E L SD E D T ++
Sbjct: 444 DRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEY--DVLTMVTIVNL---------- 491
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+ + AL+ MY KC + + +F+ M +N+VSWN++I G+S++
Sbjct: 492 ---------------LVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKH 536
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G S E+ L +M ++G P+ +T + +L
Sbjct: 537 GCSKEALILYEEM--PKKGMYPNEVTFLAIL 565
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
N ++ T L+ MYS CG +R VFD++ +N+ WNA++SG++K+ + L ++ E+
Sbjct: 490 NLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEM 549
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVH-GMAAKMGLIGDVFVSNALIAMYGKCA 249
+ P+ TF ++ AC V G + M + ++ + G+
Sbjct: 550 PKKG-MYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAG 608
Query: 250 FVEEMVKLFEVMP-ERNLVSWNSII 273
+E+ + E MP E + +W +++
Sbjct: 609 RLEDAKEFVEKMPIEPEVSTWGALL 633
>gi|326522570|dbj|BAK07747.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 110/204 (53%), Gaps = 3/204 (1%)
Query: 107 CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQ 166
C D+ +G+ + E V S ++ + L+ MY CG ++RRVFD++ ++
Sbjct: 243 CRDAGDLALGRWLEEWVK-SVGMEVGSLVGSALVGMYEKCGEMAEARRVFDAIAHKDNVA 301
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
WNAL++G+ +N + + +S+F + +PD T V+ AC + + G+ + A
Sbjct: 302 WNALITGYAQNGMSKEAISLFHSMRQ-AGARPDKITLVGVLSACAAVGALELGTELDRYA 360
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
+ G +V+V AL+ MY KC + +++FE +P +N SWN++ICG + NG E+
Sbjct: 361 LQRGFYSNVYVGTALVDMYSKCGDLTRAIQVFEKLPCKNEASWNALICGLAFNGRGQEAI 420
Query: 287 DLLIKMMGCEEGFIPDVITVVTVL 310
++M +EG PD IT + VL
Sbjct: 421 RQF-ELMRKQEGLRPDDITFIGVL 443
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 98/181 (54%), Gaps = 3/181 (1%)
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE 189
++D +++ L+TMYS G P +RRVFD + R++ WN+++ + + D +F
Sbjct: 164 NHDHTVHS-LVTMYSNLGRPRAARRVFDGILRRDVVSWNSMIKAYQAAGMKDDAARMFRA 222
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
+ ++ + P+ T V+ AC D+ G + +G+ V +AL+ MY KC
Sbjct: 223 MVAEGAVPPNAVTVAVVLAACRDAGDLALGRWLEEWVKSVGMEVGSLVGSALVGMYEKCG 282
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
+ E ++F+ + ++ V+WN++I G+++NG S E+ L M + G PD IT+V V
Sbjct: 283 EMAEARRVFDAIAHKDNVAWNALITGYAQNGMSKEAISLFHSMR--QAGARPDKITLVGV 340
Query: 310 L 310
L
Sbjct: 341 L 341
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E+G + +SN ++ T L+ MYS CG + +VF+ L +
Sbjct: 340 VLSACAAVGALELGTELDRYALQRGFYSNVYV-GTALVDMYSKCGDLTRAIQVFEKLPCK 398
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
N WNAL+ G N + + F + L+PD+ TF V+ AC
Sbjct: 399 NEASWNALICGLAFNGRGQEAIRQFELMRKQEGLRPDDITFIGVLSAC 446
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
L+PD +T P ++ A F + H + K+GL ++L+ MY
Sbjct: 127 LRPDAYTLPFLLLAAARCPAPAFAASAHALLQKLGLHNHDHTVHSLVTMYSNLGRPRAAR 186
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIP 301
++F+ + R++VSWNS+I + G ++ + M+ EG +P
Sbjct: 187 RVFDGILRRDVVSWNSMIKAYQAAGMKDDAARMFRAMVA--EGAVP 230
>gi|357457659|ref|XP_003599110.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488158|gb|AES69361.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 112/200 (56%), Gaps = 5/200 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+ I + +H V S + + FI +L++ Y G D+ +FD + ++ WN+LVS
Sbjct: 61 VSICRIIHAHVIKSLDYRDGFI-GDQLVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVS 119
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G K + LS+F ++ SD+ELK + FTF VI AC G VH A K+GL+
Sbjct: 120 GLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEGYYVHCCAMKLGLV 179
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMP--ERNLVSWNSIICGFSENGFSCESFDLLI 290
+V V NAL+ MYGK FVE +LF MP E+++VSWNSI+ ++NG E+F+
Sbjct: 180 YEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFD 239
Query: 291 KMMGCEEGFIPDVITVVTVL 310
M GF PD T+V++L
Sbjct: 240 MMR--VNGFFPDDATMVSLL 257
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 98/210 (46%), Gaps = 5/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL--K 160
++ AC EK + G VH ++N L+ MY GF + R+F +
Sbjct: 153 VISACVSEKACDEGYYVHCCAMKLGLVYEVKVVNA-LVNMYGKFGFVESAFRLFSEMPES 211
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+++ WN++V+ +N + + + F ++ PD+ T +++AC
Sbjct: 212 EKSIVSWNSIVAVCAQNGMPNEAFNCF-DMMRVNGFFPDDATMVSLLQACENFPLGRMVE 270
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG+ GL ++ + L+ +Y K + K+FE + + + V+W +++ G++ +G
Sbjct: 271 VLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAMHG 330
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + +++ EEG PD +T +L
Sbjct: 331 CGKEAIEFFERIVR-EEGMEPDHVTFTHLL 359
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 91/187 (48%), Gaps = 20/187 (10%)
Query: 98 EATGV-LLQACGHEKDIEIGKRVHEL--VSASTQFSNDFIINTRLITMYSLCGFPLDSRR 154
+AT V LLQAC ++ +G+ V L V + + I T L+ +YS G +SR+
Sbjct: 250 DATMVSLLQAC---ENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRK 306
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VF+ + + W A+++G+ + + + F + + ++PD+ TF ++ AC
Sbjct: 307 VFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSG 366
Query: 215 DVGFG-------SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNL 266
V G S V+ + ++ D + + ++ + G+C +++ +L + MP E N
Sbjct: 367 LVKEGKYFFRVMSDVYKVQPRL----DHY--SCMVDLLGRCGLLDDAHELIKNMPFEPNS 420
Query: 267 VSWNSII 273
W +++
Sbjct: 421 GVWGALL 427
>gi|326506094|dbj|BAJ91286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 625
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 112/194 (57%), Gaps = 3/194 (1%)
Query: 118 RVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKN 177
+VH ++ S + F+ N+ L+ +Y CG+ ++++FD++ +++ W A++SG
Sbjct: 246 QVHSIILKSGYLKDLFLCNS-LLDLYGRCGYIDLAKKLFDAMLEKDVVSWTAVISGLAAC 304
Query: 178 ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFV 237
D IF ++ L P++FTF ++ +C + D+G G H + K GL +
Sbjct: 305 GYQADAFDIFRQMLKAAML-PNSFTFGSIVSSCADVNDLGSGRQCHALVVKHGLELVPII 363
Query: 238 SNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCE- 296
++ + MY KCA +++ +++FE+MP+R+++SWN++ICG ++NG S S +L +M
Sbjct: 364 ASCFVDMYSKCAKMDDAIRMFEIMPQRDIISWNAMICGLAQNGQSARSLELYDEMTQLHY 423
Query: 297 EGFIPDVITVVTVL 310
E P+ +T V VL
Sbjct: 424 ESVTPNSVTFVGVL 437
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 110/202 (54%), Gaps = 10/202 (4%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
D+ ++VH + F+ D + T I +Y+ G D+ +VFD + R+L WN L+
Sbjct: 139 DLGSARQVHARAVKAGVFA-DACVGTGFIKLYAELGLMEDAGKVFDCMPLRDLMSWNVLL 197
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG---SGVHGMAAK 228
++ + F+ ++ ++PD FTF V+ G+A++ G VH + K
Sbjct: 198 DCGVRSGEAGSCMKEFLSMTG-CGVQPDEFTFATVLN---GLAELSAGLEAMQVHSIILK 253
Query: 229 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
G + D+F+ N+L+ +YG+C +++ KLF+ M E+++VSW ++I G + G+ ++FD+
Sbjct: 254 SGYLKDLFLCNSLLDLYGRCGYIDLAKKLFDAMLEKDVVSWTAVISGLAACGYQADAFDI 313
Query: 289 LIKMMGCEEGFIPDVITVVTVL 310
+M+ + +P+ T +++
Sbjct: 314 FRQML--KAAMLPNSFTFGSIV 333
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ R+ + WN +SG + D L F++++ T L PD FT+ V CG D+G
Sbjct: 86 MPERDSWSWNTAISGLARAGRTRDALRRFLQMTH-TALVPDAFTYSIVSPCCG--VDLGS 142
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII-CGFS 277
VH A K G+ D V I +Y + +E+ K+F+ MP R+L+SWN ++ CG
Sbjct: 143 ARQVHARAVKAGVFADACVGTGFIKLYAELGLMEDAGKVFDCMPLRDLMSWNVLLDCGV- 201
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+G + + M GC G PD T TVL
Sbjct: 202 RSGEAGSCMKEFLSMTGC--GVQPDEFTFATVL 232
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 35/239 (14%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL +C + + VH + TQFS + I RLI +Y C D+R++FD + R
Sbjct: 21 LLDSCLRSRSARGTRLVHARI-LMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQR 79
Query: 163 NLFQWNAL-------------------------------VSGFTKNELYTDVLSIFVELS 191
N F WN+L VSGF +++ + + L FV++
Sbjct: 80 NTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMH 139
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ L + ++F + AC G+ D+ G+ VH + +K DV++ +ALI MY KC V
Sbjct: 140 REDFL-LNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSV 198
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F M ERNLV+WNS+I + +NG + E+ ++ ++MM + G PD +T+ +V+
Sbjct: 199 ACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMM--DSGLEPDEVTLASVV 255
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 116/239 (48%), Gaps = 58/239 (24%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-- 160
++ AC ++ G ++H V + +F +D ++ L+ MY+ C ++RRVFD +
Sbjct: 254 VVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIR 313
Query: 161 -----------------------------TRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
RN+ WNAL++G+T+N + L +F L
Sbjct: 314 NVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLK 373
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
++ + P ++TF ++K+ D+FV N+LI MY KC +
Sbjct: 374 RES-IWPTHYTFGNLLKS------------------------DIFVGNSLIDMYMKCGSI 408
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ ++FE M ER+ VSWN+II G+++NG+ E+ + KM+ C E PD +T++ VL
Sbjct: 409 EDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEK--PDHVTMIGVL 465
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 34/221 (15%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G L AC D+ +G +VH LVS S ++S D + + LI MYS CG + VF +
Sbjct: 151 GSALSACAGLMDLNMGTQVHALVSKS-RYSTDVYMGSALIDMYSKCGSVACAEEVFSGMI 209
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RNL WN+L++ + +N ++ L +FV + D+ L+PD T V+ AC + + G
Sbjct: 210 ERNLVTWNSLITCYEQNGPASEALEVFVRM-MDSGLEPDEVTLASVVSACASLCALKEGL 268
Query: 221 GVHGMAAKMG-LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP----------------- 262
+H K D+ + NAL+ MY KC+ V E ++F+ M
Sbjct: 269 QIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARA 328
Query: 263 --------------ERNLVSWNSIICGFSENGFSCESFDLL 289
+RN+VSWN++I G+++NG + E+ L
Sbjct: 329 ASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLF 369
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 2/153 (1%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
+D + LI MY CG D RVF+ +K R+ WNA++ G+ +N + L IF
Sbjct: 388 LKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFR 447
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
++ E KPD+ T V+ AC V G + GLI ++ + G+
Sbjct: 448 KMLVCGE-KPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRA 506
Query: 249 AFVEEMVKLFEVMP-ERNLVSWNSIICGFSENG 280
+ E L E MP + V W S++ +G
Sbjct: 507 GCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHG 539
>gi|297745796|emb|CBI15852.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 110/210 (52%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN--TRLITMYSLCGFPLDSRRVFDSLK 160
LL+ + I GK VH L+ S+ F ++ I + MY+ C +++ RVFD +
Sbjct: 81 LLRDSAAKGSIREGKSVHGLLLKSS-FGDEESIRLFNHVAYMYAECSCFVEAWRVFDGMP 139
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN F W +++G KN L+ D F ++ D L PD F + VI++C G+ + G
Sbjct: 140 HRNSFSWTVMIAGSKKNGLFLDGFRFFYDMLVDGIL-PDEFVYSAVIQSCIGLGCIELGE 198
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VHG K G DV V +L++MY K E V++F + E N VSW ++I G S NG
Sbjct: 199 AVHGQIVKRGFWDDVIVGTSLLSMYAKLHNSEASVRVFNAIAEHNQVSWGAVISGLSSNG 258
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F + M+ +GF P++ T +VL
Sbjct: 259 LYLEAFHQFLAMI--TQGFTPNMYTFSSVL 286
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 119/215 (55%), Gaps = 15/215 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+A G +D G+ VH V SN ++ T LI MYS CG D+R VFD R
Sbjct: 285 VLKAVGKIRDATKGREVHHCVMEYGMESN-VVVGTSLIDMYSKCGHLSDARSVFD----R 339
Query: 163 NLFQ------WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
N ++ WNA++S +T+ + + L +F+E+S + ++KPD +T+ V A + +
Sbjct: 340 NFYKSKVNNPWNAMISSYTQCGYWQEALDLFIEMSLN-DVKPDLYTYGGVFSAIAALKWL 398
Query: 217 GFGSGVHGMAAKMGLIGDVF-VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
FG VHGM K G V ++NA++ Y KC +E+ K+F+ M ER++VSW +++
Sbjct: 399 YFGRQVHGMVVKSGNGSRVLSLNNAIVDAYFKCQSLEDARKVFDRMQERDMVSWTTLVSA 458
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + E+ + +M E+GF+P+ T +VL
Sbjct: 459 YVQCYQPSEALSIFSQMR--EQGFMPNQFTFSSVL 491
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 107/192 (55%), Gaps = 1/192 (0%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G + A K + G++VH +V S S +N ++ Y C D+R+VFD ++
Sbjct: 386 GGVFSAIAALKWLYFGRQVHGMVVKSGNGSRVLSLNNAIVDAYFKCQSLEDARKVFDRMQ 445
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ W LVS + + ++ LSIF ++ + P+ FTF V+ AC ++ + +G
Sbjct: 446 ERDMVSWTTLVSAYVQCYQPSEALSIFSQMR-EQGFMPNQFTFSSVLVACASLSLLEYGR 504
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VHG+ K GL D + ++L MY K + + V++FE + ++VSW++II G++++G
Sbjct: 505 QVHGLICKAGLDDDNCIESSLTNMYAKSGNIIDAVEVFEKIVCPDVVSWSAIIYGYAQHG 564
Query: 281 FSCESFDLLIKM 292
F ++ +L+ KM
Sbjct: 565 FLDKAVELVQKM 576
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 102/192 (53%), Gaps = 4/192 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++Q+C IE+G+ VH + F +D I+ T L++MY+ S RVF+++
Sbjct: 184 VIQSCIGLGCIELGEAVHGQI-VKRGFWDDVIVGTSLLSMYAKLHNSEASVRVFNAIAEH 242
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N W A++SG + N LY + F+ + + P+ +TF V+KA G I D G V
Sbjct: 243 NQVSWGAVISGLSSNGLYLEAFHQFLAMITQG-FTPNMYTFSSVLKAVGKIRDATKGREV 301
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS--WNSIICGFSENG 280
H + G+ +V V +LI MY KC + + +F+ ++ V+ WN++I +++ G
Sbjct: 302 HHCVMEYGMESNVVVGTSLIDMYSKCGHLSDARSVFDRNFYKSKVNNPWNAMISSYTQCG 361
Query: 281 FSCESFDLLIKM 292
+ E+ DL I+M
Sbjct: 362 YWQEALDLFIEM 373
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 109/190 (57%), Gaps = 2/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC KD+ IGK+VH +V S F D + L+ MY+ C LDS+R+FD + R
Sbjct: 163 VLKACSIVKDLRIGKQVHGVVVVSG-FEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPER 221
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WNAL S + + + + + +F E+ + +KP+ F+ ++ AC G+ D G +
Sbjct: 222 NVVSWNALFSCYVQXDFCGEAVGLFYEMVL-SGIKPNEFSLSSMVNACTGLRDSSRGKII 280
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K+G D F +NAL+ MY K + + + +FE + + ++VSWN++I G +
Sbjct: 281 HGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHH 340
Query: 283 CESFDLLIKM 292
++ +LL +M
Sbjct: 341 EQALELLGQM 350
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 103/191 (53%), Gaps = 2/191 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL C K + G ++H ++ S S+D I LI +YS C +R++ D
Sbjct: 62 LLSQCCTTKSLRPGLQIHAHITKSG-LSDDPSIRNHLINLYSKCRXFGYARKLVDESSEP 120
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L W+AL+SG+ +N L L F E+ +K + FTF V+KAC + D+ G V
Sbjct: 121 DLVSWSALISGYAQNGLGGGALMAFHEMHL-LGVKCNEFTFSSVLKACSIVKDLRIGKQV 179
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ G GDVFV+N L+ MY KC + +LF+ +PERN+VSWN++ + + F
Sbjct: 180 HGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFC 239
Query: 283 CESFDLLIKMM 293
E+ L +M+
Sbjct: 240 GEAVGLFYEMV 250
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 108/198 (54%), Gaps = 4/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+ + ++VH L S + F +D + LI Y C D+ R+F+ +L + ++++
Sbjct: 449 VHVCRQVHGL-SVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMIT 507
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
+ + + L +F+E+ D ELKPD F ++ AC ++ G +H K G +
Sbjct: 508 AYAQYGQGEEALKLFLEMQ-DMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFV 566
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
D+F N+L+ MY KC +++ + F + ER +VSW+++I G +++G ++ L +M
Sbjct: 567 LDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQM 626
Query: 293 MGCEEGFIPDVITVVTVL 310
+ +EG P+ IT+V+VL
Sbjct: 627 L--KEGVSPNHITLVSVL 642
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 106/191 (55%), Gaps = 4/191 (2%)
Query: 109 HEKDIEI-GKRVHELVSA--STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
HE+ +E+ G+ +L S+ +D ++ L+ MYS C D+R F+ L ++L
Sbjct: 340 HEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLI 399
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
WNA++SG+++ + LS+FVE+ + + + T ++K+ G+ V VHG+
Sbjct: 400 AWNAIISGYSQYWEDMEALSLFVEMHKEG-IGFNQTTLSTILKSTAGLQVVHVCRQVHGL 458
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
+ K G D++V N+LI YGKC+ VE+ ++FE +LVS+ S+I +++ G E+
Sbjct: 459 SVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEA 518
Query: 286 FDLLIKMMGCE 296
L ++M E
Sbjct: 519 LKLFLEMQDME 529
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 31/208 (14%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC +D GK +H + + F N L+ MY+ G D+ VF+ +K
Sbjct: 264 MVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANA-LVDMYAKVGDLADAISVFEKIKQP 322
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA+++G +E + L + ++ +
Sbjct: 323 DIVSWNAVIAGCVLHEHHEQALELLGQMKRQ----------------------------L 354
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H KM + D+FVS L+ MY KC +E+ F ++PE++L++WN+II G+S+
Sbjct: 355 HSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWED 414
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L ++M +EG + T+ T+L
Sbjct: 415 MEALSLFVEMH--KEGIGFNQTTLSTIL 440
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%)
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
P + ++ ++ C + G +H K GL D + N LI +Y KC KL
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKL 113
Query: 258 FEVMPERNLVSWNSIICGFSENGF 281
+ E +LVSW+++I G+++NG
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGL 137
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 105/183 (57%), Gaps = 3/183 (1%)
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
+F D I+ T +I MY+ CG +R +FD ++ +N+ W+A+++ + + L +F
Sbjct: 161 KFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF 220
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+ S L PD T ++ AC + ++ G +H + K GL D FV AL+ MYGK
Sbjct: 221 RMMLSSGML-PDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGK 279
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
C +E+ LF+ MPER+LV+W +I G++E G + ES L KM EEG +PD + +V
Sbjct: 280 CREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMR--EEGVVPDKVAMV 337
Query: 308 TVL 310
TV+
Sbjct: 338 TVV 340
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 81/141 (57%), Gaps = 3/141 (2%)
Query: 170 LVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM 229
+V GF K Y + F EL +PDN+T P VI+AC + ++ G +H + K
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIR-CGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKF 59
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL 289
GL D FV AL+ MY KC +E+ LF+ M ER+LV+W +I G++E G + ES L
Sbjct: 60 GLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLF 119
Query: 290 IKMMGCEEGFIPDVITVVTVL 310
KM EEG +PD + +VTV+
Sbjct: 120 EKMR--EEGVVPDKVAMVTVV 138
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 114/232 (49%), Gaps = 6/232 (2%)
Query: 81 NKALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
KAL L + L + L + + LL AC K++++G+ +H +V D +
Sbjct: 214 RKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVY-KFGLDLDHFVCAA 272
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+ MY C D+R +FD + R+L W ++ G+ + + L +F ++ + + P
Sbjct: 273 LVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEG-VVP 331
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D V+ AC + + + + DV + A+I M+ KC VE ++F
Sbjct: 332 DKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIF 391
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ M E+N++SW+++I + +G ++ DL M+ G +P+ IT+V++L
Sbjct: 392 DRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMML--RSGILPNKITLVSLL 441
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC K++++G+ +H +V D + L+ MY C D+R +FD ++ R
Sbjct: 36 VIRACRDLKNLQMGRLIHHIVY-KFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQER 94
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L W ++ G+ + + L +F ++ + + PD V+ AC + + +
Sbjct: 95 DLVTWTVMIGGYAECGKANESLVLFEKMREEG-VVPDKVAMVTVVFACAKLGAMHKARII 153
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ DV + A+I MY KC VE ++F+ M E+N++SW+++I + +G
Sbjct: 154 DDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQG 213
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ DL M+ G +PD IT+ ++L
Sbjct: 214 RKALDLFRMML--SSGMLPDKITLASLL 239
>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 831
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 116/224 (51%), Gaps = 5/224 (2%)
Query: 87 LQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC 146
+Q N D + ++L +C +E GK+VH VS F +D + + LI +YS C
Sbjct: 409 MQFQWQNPD-RTTLAIILSSCAELGLLEAGKQVHA-VSQKLGFYDDVYVASSLINVYSKC 466
Query: 147 GFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCV 206
G S+ VF L ++ WN++++GF+ N L D L+ F + P F+F +
Sbjct: 467 GKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQ-FGFFPSEFSFATI 525
Query: 207 IKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNL 266
+C ++ + G +H K G + +VFV ++L+ MY KC V F++MP +N+
Sbjct: 526 ASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNI 585
Query: 267 VSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
V+WN +I G++ NG+ E+ L M+ E PD IT V VL
Sbjct: 586 VTWNEMIHGYAHNGYGLEAVSLYKDMISSGEK--PDDITFVAVL 627
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 115/239 (48%), Gaps = 34/239 (14%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ+C K + K +H + T FS+ F+ N LI +YS C + VFD + +
Sbjct: 11 LLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCN-HLIDLYSKCNQITSAHHVFDKIPHK 69
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSS-----------------------DT----- 194
N+F +NA++S F K+ +F+++ DT
Sbjct: 70 NIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMM 129
Query: 195 ---ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+KP + TF V ACGG+ DV G HG+ K+G +++VSNAL+ MY KC
Sbjct: 130 VYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLN 189
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ ++FE + E N V++ +++ G S+ E +L M+ +G D +++ T+L
Sbjct: 190 EDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLML--RKGICVDSVSLSTIL 246
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 86/157 (54%), Gaps = 3/157 (1%)
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
R++FD + + +L WNA++SG+ ++ + + + +F ++ + PD T ++ +C
Sbjct: 372 RQIFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQ-NPDRTTLAIILSSCAE 430
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
+ + G VH ++ K+G DV+V+++LI +Y KC +E +F + E ++V WNS+
Sbjct: 431 LGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSM 490
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
I GFS N ++ +M + GF P + T+
Sbjct: 491 IAGFSINSLEQDALACFKRMR--QFGFFPSEFSFATI 525
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 138/297 (46%), Gaps = 33/297 (11%)
Query: 41 RSIFKEKSSLSLSAKTNNASTQGLHFLQE-----------ITTLCE---ESKSLNKA-LS 85
++IF + LS K+NN FLQ ITT+ + E ++L+ L
Sbjct: 69 KNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLM 128
Query: 86 LLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSL 145
++ E++ + + AT + ACG KD+ G+R H LV F ++ ++ L+ MY+
Sbjct: 129 MVYESVKPSHITFAT--VFSACGGLKDVNCGRRNHGLV-LKVGFDSNIYVSNALLCMYTK 185
Query: 146 CGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPC 205
CG D+ RVF+ + N + ++ G ++ + L +F L + D+ +
Sbjct: 186 CGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELF-RLMLRKGICVDSVSLST 244
Query: 206 VIKACG------------GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
++ C G++ G +H +A K G D+ + N+L+ MY K ++
Sbjct: 245 ILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDS 304
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+FE + + ++VSWN +I G+ S ++ + +M C G+ PD +T + +L
Sbjct: 305 AENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCC--GYEPDDVTYINML 359
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 79/175 (45%), Gaps = 4/175 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+ +C + G+++H + N F+ + L+ MY CG +R FD +
Sbjct: 523 ATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFV-GSSLVEMYCKCGDVGAARYYFDMMP 581
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+N+ WN ++ G+ N + +S++ ++ S E KPD+ TF V+ AC A V G
Sbjct: 582 GKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGE-KPDDITFVAVLTACSHSALVDEGV 640
Query: 221 GV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSII 273
+ M K ++ + +I G+ E+ + + MP + + + W ++
Sbjct: 641 EIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVL 695
>gi|115444423|ref|NP_001045991.1| Os02g0164600 [Oryza sativa Japonica Group]
gi|49388051|dbj|BAD25165.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|49388408|dbj|BAD25541.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535522|dbj|BAF07905.1| Os02g0164600 [Oryza sativa Japonica Group]
gi|125538213|gb|EAY84608.1| hypothetical protein OsI_05976 [Oryza sativa Indica Group]
gi|125580926|gb|EAZ21857.1| hypothetical protein OsJ_05503 [Oryza sativa Japonica Group]
gi|215737275|dbj|BAG96204.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 476
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 102/183 (55%), Gaps = 3/183 (1%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
+S+ T L+ Y C F + +RRVFD ++ +++ W +VSG+ + ++ + +F
Sbjct: 151 YSSVLFTQTALMNAYFACRFEVAARRVFDEMQAKDVVAWTGMVSGYVDSGMFLRGVEVFQ 210
Query: 189 ELSSDTE-LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
E+ S E ++P+ T V AC G+ + + G+H K+GL G++ V N+LI MYGK
Sbjct: 211 EMRSCEEAVRPNVATVVSVASACAGLGSLEYAKGLHAYVEKVGLEGELIVKNSLIDMYGK 270
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
C +E LF +MP+++L SW ++I G + +G E+ L M E G +PD T V
Sbjct: 271 CGSIELARGLFGLMPQKDLHSWTAMISGLASHGHGKEAVALFFSMK--EAGVLPDSTTFV 328
Query: 308 TVL 310
VL
Sbjct: 329 VVL 331
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D +T P +I AC D +HG + ++G +F AL+ Y C F ++F
Sbjct: 120 DRYTLPFLIHACSS-GDRPLCESLHGQSLRLGYSSVLFTQTALMNAYFACRFEVAARRVF 178
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
+ M +++V+W ++ G+ ++G ++ +M CEE P+V TVV+V
Sbjct: 179 DEMQAKDVVAWTGMVSGYVDSGMFLRGVEVFQEMRSCEEAVRPNVATVVSV 229
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 122/232 (52%), Gaps = 8/232 (3%)
Query: 82 KALSL---LQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
KAL + LQ N D +G L AC K G ++H L N + NT
Sbjct: 323 KALDIFQSLQRNNLGFDEISLSGAL-TACSVIKRHLEGIQLHGLAVKCGLGFNICVANT- 380
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
++ MY CG +++ +F+ ++ R+ WNA+++ +NE LS+FV + T ++P
Sbjct: 381 ILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRST-MEP 439
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D+FT+ V+KAC G + +G+ +HG K G+ D FV +AL+ MYGKC + E K+
Sbjct: 440 DDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIH 499
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ VSWNSII GFS S + +M+ E G IPD T TVL
Sbjct: 500 ARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQML--EMGIIPDNYTYATVL 549
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 117/215 (54%), Gaps = 4/215 (1%)
Query: 78 KSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
K+L+ +S+L+ + D G +++AC ++ + G +H + S D+ + +
Sbjct: 424 KTLSLFVSMLRSTMEPDDF--TYGSVVKACAGQQALNYGTEIHGRIIKSG-MGLDWFVGS 480
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L+ MY CG +++ ++ L+ + WN+++SGF+ + + F ++ + +
Sbjct: 481 ALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQML-EMGII 539
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
PDN+T+ V+ C +A + G +H K+ L DV++++ L+ MY KC +++ +
Sbjct: 540 PDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLM 599
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
FE P+R+ V+W+++IC ++ +G ++ +L +M
Sbjct: 600 FEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEM 634
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 1/162 (0%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I LI Y+ G ++ +FDS+ R++ WN+L+S + N + + IFV +
Sbjct: 71 DVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMR 130
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
S ++ D TF ++KAC GI D G G VH +A +MG DV +AL+ MY KC +
Sbjct: 131 S-LKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKL 189
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
++ ++F MPERNLV W+++I G+ +N E L M+
Sbjct: 190 DDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDML 231
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 2/199 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
V+L+AC +D +G +VH L + F ND + + L+ MYS C D+ RVF +
Sbjct: 142 AVILKACSGIEDYGLGLQVHCL-AIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMP 200
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RNL W+A+++G+ +N+ + + L +F ++ + T+ V ++C G++ G+
Sbjct: 201 ERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLK-VGMGVSQSTYASVFRSCAGLSAFKLGT 259
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG A K D + A + MY KC + + K+F +P S+N+II G++
Sbjct: 260 QLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQD 319
Query: 281 FSCESFDLLIKMMGCEEGF 299
++ D+ + GF
Sbjct: 320 QGLKALDIFQSLQRNNLGF 338
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 201 FTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV 260
TF +++ C + + G VH G + ++V+N L+ Y K + + K+F+
Sbjct: 7 LTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDR 66
Query: 261 MPERNLVSWNSIICGFS---ENGFSCESFD 287
MP+R+++SWN++I G++ GF+ FD
Sbjct: 67 MPQRDVISWNTLIFGYAGIGNMGFAQSLFD 96
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 120/214 (56%), Gaps = 8/214 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL--- 159
+L+ACG + G VH +V A+ SN FI N+ ++ MY CG D+ ++FD +
Sbjct: 133 VLKACGEIPSLRHGASVHAIVCANGLGSNVFICNS-IVAMYGRCGALDDAHQMFDEVLER 191
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK--PDNFTFPCVIKACGGIADVG 217
K ++ WN++++ + + L I + + LK PD T ++ AC + +
Sbjct: 192 KIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQ 251
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G VHG + + GL+ DVFV NAL++MY KC+ + E K+FE + ++++VSWN+++ G+S
Sbjct: 252 HGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYS 311
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ G S +S L KMM EE DVIT V+
Sbjct: 312 QIG-SFDSALSLFKMMQ-EEDIKLDVITWSAVIA 343
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 12/218 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSAS------TQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
LL C + GK+ H V + +D ++ LI MY+ C +R +F
Sbjct: 376 LLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIF 435
Query: 157 DSL--KTRNLFQWNALVSGFTKNELYTDVLSIFVEL-SSDTELKPDNFTFPCVIKACGGI 213
DS+ K +N+ W ++ G+ ++ D L +F ++ T LKP+ FT C + AC +
Sbjct: 436 DSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARL 495
Query: 214 ADVGFGSGVHGMAAKMGLIGDV-FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
++ G +H A + +V +V N LI MY K ++ +F+ M RN+VSW S+
Sbjct: 496 GELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSL 555
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ G+ +G E+ L +M + GF D IT + VL
Sbjct: 556 MTGYGMHGRGEEALHLFDQMQ--KLGFAVDGITFLVVL 591
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 87/152 (57%), Gaps = 5/152 (3%)
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+F WNAL+ K L D L + ++ L PD++TFP V+KACG I + G+ VH
Sbjct: 92 VFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWL-PDHYTFPFVLKACGEIPSLRHGASVH 150
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER---NLVSWNSIICGFSENG 280
+ GL +VF+ N+++AMYG+C +++ ++F+ + ER ++VSWNSI+ + + G
Sbjct: 151 AIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGG 210
Query: 281 FSCESFDLLIKMMGCEE-GFIPDVITVVTVLP 311
S + + +M PD IT+V +LP
Sbjct: 211 QSRTALRIAFRMGNHYSLKLRPDAITLVNILP 242
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 5/173 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC ++ +G+++H + S + LI MYS G +R VFD++K RN
Sbjct: 489 LMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRN 548
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGSG 221
+ W +L++G+ + + L +F ++ D TF V+ AC G+ D G
Sbjct: 549 VVSWTSLMTGYGMHGRGEEALHLFDQMQK-LGFAVDGITFLVVLYACSHSGMVDQGM-IY 606
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
H M G+ ++ + G+ + E ++L + M E V W +++
Sbjct: 607 FHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALL 659
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 119/210 (56%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L C D+E+G R+ +L + + ++ I++T ++ MY CG D R VFD +
Sbjct: 232 ATVLSICAKLGDLEMGLRIKKL-NDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMA 290
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ W+A+++G+ +N + L +F + S ++KP++ T V+ AC + V G
Sbjct: 291 RRDVVTWSAMIAGYAQNGRSNEALELFENMKS-AQIKPNDVTLVSVLSACAQLGSVETGE 349
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+ GLI +V+V++AL+ MY KC + + ++F+ +P+R+ V+WNS+I G + NG
Sbjct: 350 RIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAING 409
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ ++ L +M E P+ IT V ++
Sbjct: 410 FAEDAIALYNRMKEIE--VKPNNITFVGLM 437
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 37/281 (13%)
Query: 62 QGLH--FLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRV 119
QG+H F+ + L +++L +S+ Q N+ + ++C I++GK+V
Sbjct: 61 QGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCF--TIPPIFKSCASLLAIDVGKQV 118
Query: 120 HELVSA----STQFSNDFIINTR--------------------------LITMYSLCGFP 149
H LV S+ F + +IN LI+ YS G
Sbjct: 119 HSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEV 178
Query: 150 LDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKA 209
L +R +FD ++ R++ WNA++S + +N Y IF + D +P+ T V+
Sbjct: 179 LAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQ-DEMCEPNEITLATVLSI 237
Query: 210 CGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSW 269
C + D+ G + + L ++ VS A++ MY KC V++ +F+ M R++V+W
Sbjct: 238 CAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTW 297
Query: 270 NSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+++I G+++NG S E+ +L M + P+ +T+V+VL
Sbjct: 298 SAMIAGYAQNGRSNEALELFENMKSAQ--IKPNDVTLVSVL 336
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 77/142 (54%), Gaps = 6/142 (4%)
Query: 81 NKALSLLQENLHNADLK--EATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
N+AL L EN+ +A +K + T V +L AC +E G+R+ V + SN ++ +
Sbjct: 311 NEALELF-ENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASA 369
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L+ MYS CG + +R++FD L R+ WN+++ G N D ++++ + + E+K
Sbjct: 370 -LLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMK-EIEVK 427
Query: 198 PDNFTFPCVIKACGGIADVGFG 219
P+N TF ++ AC V G
Sbjct: 428 PNNITFVGLMTACTHAGHVELG 449
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 38/192 (19%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+R+VFD + + + ++ +++ L + L FV + + ++ FT P + K+C
Sbjct: 49 ARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNN-VRIVCFTIPPIFKSCA 107
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC------------AFVEEMV---- 255
+ + G VH + + G VF NALI Y K V++ +
Sbjct: 108 SLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNC 167
Query: 256 ---------------KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG--CEEG 298
+LF+ M +R++VSWN++I +++NG + + + +M CE
Sbjct: 168 LISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCE-- 225
Query: 299 FIPDVITVVTVL 310
P+ IT+ TVL
Sbjct: 226 --PNEITLATVL 235
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 125/247 (50%), Gaps = 11/247 (4%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHE--LVSAST 127
+ LC+E L +AL L A +E G +L + G++VH + + S
Sbjct: 33 LKRLCKEG-DLRQALRQLTTRAPPA--REHYGWVLDLVAARRAAAEGRQVHAHAVTTGSL 89
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
+D + T+L+ MY CG D+RR+F+ + R +F WNALV + + + + ++
Sbjct: 90 NEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVY 149
Query: 188 --VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
+ S+ PD T V+KACG D G VHG+A K+GL V+NALI MY
Sbjct: 150 GAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMY 209
Query: 246 GKCAFVEEMVKLFEVMPE--RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
KC ++ +++FE + + R++ SWNS++ G +NG + E+ L M GF +
Sbjct: 210 AKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQ--SAGFPMNS 267
Query: 304 ITVVTVL 310
T V VL
Sbjct: 268 YTSVAVL 274
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 106/210 (50%), Gaps = 7/210 (3%)
Query: 102 VLLQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+LQ C + +G+ +H L+ ++ + I L+ MY+ G + RVF +
Sbjct: 272 AVLQVCAELGLLSLGRELHAALLKCGSELN---IQCNALLVMYAKYGRVDSALRVFGQIA 328
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
++ WN+++S + +N Y + + F E+ +PD+ + A G ++ + G
Sbjct: 329 EKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHG-FQPDHACVVSLSSALGHLSRLNNGR 387
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H A K L D+ V N L+ MY KC +E K+FE M R+ +SW +I+ F+++
Sbjct: 388 EFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSS 447
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ ++++++ +EG + D + + ++L
Sbjct: 448 RHSEALEMILELQ--KEGIMVDSMMIGSIL 475
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 101/210 (48%), Gaps = 5/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L+ C K I + K+VH A D I+ RLI +Y CG S +F ++
Sbjct: 472 GSILETCCGLKSISLLKQVH--CYAIRNGLLDLILENRLIDIYGECGEFDHSLNLFQRVE 529
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+++ W ++++ T N + +F E+ ++PD+ ++ A G++ + G
Sbjct: 530 KKDIVSWTSMINCCTNNGRLNGAVFLFTEMQK-ANIQPDSVALVSILVAIAGLSSLTKGK 588
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VHG + + V ++L+ MY C + +++FE +++V W ++I +G
Sbjct: 589 QVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHG 648
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ DL +M+ + G PD ++ + +L
Sbjct: 649 HGKQAIDLFKRML--QTGLTPDHVSFLALL 676
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 116/196 (59%), Gaps = 6/196 (3%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
K +H L+ + + + FI +TRL+ +Y+ G SR FD + ++++ WN+++S +
Sbjct: 135 AKCLHALLVVAGKVQSIFI-STRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 193
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
N + + + F +L +E++PD +TFP V+KACG + D G +H A K+G +V
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNV 250
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
FV+ +LI MY + F LF+ MP R++ SWN++I G +NG + ++ D+L +M
Sbjct: 251 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMR-- 308
Query: 296 EEGFIPDVITVVTVLP 311
EG + +TVV++LP
Sbjct: 309 LEGIKMNFVTVVSILP 324
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 116/244 (47%), Gaps = 26/244 (10%)
Query: 85 SLLQENLHNADLKEATGV-------------------LLQACGHEKDIEIGKRVHELVSA 125
S++ +HN EA G +L+ACG D G+++H +
Sbjct: 187 SMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIH-CWAF 242
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
F + + LI MYS GF +R +FD + R++ WNA++SG +N L
Sbjct: 243 KLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALD 302
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
+ E+ + +K + T ++ C + D+ +H K GL D+FVSNALI MY
Sbjct: 303 VLDEMRLEG-IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMY 361
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
K +E+ K F+ M ++VSWNSII + +N + +KM GF PD++T
Sbjct: 362 AKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQ--LNGFQPDLLT 419
Query: 306 VVTV 309
+V++
Sbjct: 420 LVSL 423
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 107/208 (51%), Gaps = 2/208 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L +D + + VH + D +I ++ MY+ G + +VF+ + +
Sbjct: 423 LASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVK 482
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN L++G+ +N L ++ + ++ + E+ P+ T+ ++ A + + G +
Sbjct: 483 DVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKI 542
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K L DVFV+ LI +YGKC + + + LF +P+ + V+WN+II +G +
Sbjct: 543 HGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHA 602
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M+ +EG PD +T V++L
Sbjct: 603 EKTLKLFGEML--DEGVKPDHVTFVSLL 628
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 2/160 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L A H ++ G ++H V T D + T LI +Y CG +D+ +F +
Sbjct: 526 ILPAYAHVGALQQGMKIHGRV-IKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE 584
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA++S + L +F E+ D +KPD+ TF ++ AC V G
Sbjct: 585 SSVTWNAIISCHGIHGHAEKTLKLFGEML-DEGVKPDHVTFVSLLSACSHSGFVEEGKWC 643
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ + G+ + ++ + G+ ++E + MP
Sbjct: 644 FRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMP 683
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
F +H + G + +F+S L+ +Y V F+ +P++++ +WNS+I +
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 193
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
NG E+ +++ E PD T VL
Sbjct: 194 HNGHFHEAIGCFYQLLLVSE-IRPDFYTFPPVL 225
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 116/196 (59%), Gaps = 6/196 (3%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
K +H L+ + + + FI +TRL+ +Y+ G SR FD + ++++ WN+++S +
Sbjct: 35 AKCLHALLVVAGKVQSIFI-STRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 93
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
N + + + F +L +E++PD +TFP V+KACG + D G +H A K+G +V
Sbjct: 94 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNV 150
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
FV+ +LI MY + F LF+ MP R++ SWN++I G +NG + ++ D+L +M
Sbjct: 151 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMR-- 208
Query: 296 EEGFIPDVITVVTVLP 311
EG + +TVV++LP
Sbjct: 209 LEGIKMNFVTVVSILP 224
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 95/172 (55%), Gaps = 2/172 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+ MY+ G + +VF+ + +++ WN L++G+ +N L ++ + ++ + E+ P
Sbjct: 226 FVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIP 285
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ T+ ++ A + + G +HG K L DVFV+ LI +YGKC + + + LF
Sbjct: 286 NQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLF 345
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+P+ + V+WN+II +G + ++ L +M+ +EG PD +T V++L
Sbjct: 346 YQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEML--DEGVKPDHVTFVSLL 395
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 56/246 (22%)
Query: 85 SLLQENLHNADLKEATGV-------------------LLQACGHEKDIEIGKRVHELVSA 125
S++ +HN EA G +L+ACG D G+++H +
Sbjct: 87 SMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIH-CWAF 142
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
F + + LI MYS GF +R +FD + R++ WNA++SG +N L
Sbjct: 143 KLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALD 202
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
+ E+ + GI KM + V + + MY
Sbjct: 203 VLDEMRLE------------------GI--------------KMNFVTVVSILPVFVDMY 230
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
K ++ K+FE++P ++++SWN++I G+++NG + E+ ++ M C+E IP+ T
Sbjct: 231 AKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKE-IIPNQGT 289
Query: 306 VVTVLP 311
V++LP
Sbjct: 290 WVSILP 295
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 2/160 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L A H ++ G ++H V T D + T LI +Y CG +D+ +F +
Sbjct: 293 ILPAYAHVGALQQGMKIHGRV-IKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE 351
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA++S + L +F E+ D +KPD+ TF ++ AC V G
Sbjct: 352 SSVTWNAIISCHGIHGHAEKTLKLFGEM-LDEGVKPDHVTFVSLLSACSHSGFVEEGKWC 410
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ + G+ + ++ + G+ ++E + MP
Sbjct: 411 FRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMP 450
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
F +H + G + +F+S L+ +Y V F+ +P++++ +WNS+I +
Sbjct: 34 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 93
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
NG E+ +++ E PD T VL
Sbjct: 94 HNGHFHEAIGCFYQLLLVSE-IRPDFYTFPPVL 125
>gi|225216941|gb|ACN85235.1| EMB2261 putative [Oryza minuta]
Length = 612
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 117/210 (55%), Gaps = 6/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G ++ A G+ K + G++ H V N I+ + + MY+ CG +++R+VFD ++
Sbjct: 246 GSMMTALGNLKRVSQGRQAHAQVVGRGLCGN-VIVESSTLDMYAKCGLMVEARKVFDRMQ 304
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN AL+ G+ +N Y V+++F E+ ++ D ++ V++AC G++ V G
Sbjct: 305 VRNEVSQCALLGGYCQNGEYEKVITLFREMD---KVDGDWYSLGTVLRACAGLSSVKPGK 361
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H +MG DV V +AL+ +Y KC V+ +FE RN ++WN++I GF++NG
Sbjct: 362 EIHCRFLRMGGWRDVVVESALVDLYAKCGAVDYAYSVFEASTVRNTITWNAMIGGFTQNG 421
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L +M+ EG PD I+ + VL
Sbjct: 422 HGEQAINLFKRMV--REGPRPDYISFIGVL 449
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 6/205 (2%)
Query: 81 NKALSLLQENLHNADLK-----EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
+AL+ L+ L AD A ++AC +D + G +H V F +D ++
Sbjct: 119 RRALASLRAMLTGADDDVSPNAHALSAAVKACAVLRDHKAGACLHGSVLVRG-FGDDDVV 177
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
+ L+ MY P D+R+VF+ ++ + + +L+S F +N+ + + + F +
Sbjct: 178 LSSLVDMYGHVAAPGDARKVFEEMRAPDGICYTSLISAFVRNDWFEEAVRWFRSMLMMNG 237
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
++PD TF ++ A G + V G H GL G+V V ++ + MY KC + E
Sbjct: 238 VRPDGCTFGSMMTALGNLKRVSQGRQAHAQVVGRGLCGNVIVESSTLDMYAKCGLMVEAR 297
Query: 256 KLFEVMPERNLVSWNSIICGFSENG 280
K+F+ M RN VS +++ G+ +NG
Sbjct: 298 KVFDRMQVRNEVSQCALLGGYCQNG 322
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 105/184 (57%), Gaps = 4/184 (2%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
KEA V+L I+ ++H + + D + +L+ YS G +R +F
Sbjct: 38 KEACEVILD---QYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIF 94
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
D +N+ +N ++ + N LY + LSIF + S PD++TFPCV+KAC G+ ++
Sbjct: 95 DRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLS-CAFNPDHYTFPCVLKACSGLDNL 153
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G VH K+GL ++F+ NAL+AMYGKC + E K+ + MP R++VSWNS++ G+
Sbjct: 154 RVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGY 213
Query: 277 SENG 280
+++G
Sbjct: 214 AQSG 217
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 87/156 (55%), Gaps = 3/156 (1%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
+F+ + +NL WN +++ + N + + +S+F+++ + +KPD T ++ ACG ++
Sbjct: 262 MFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQME-ECGMKPDAVTIASLLPACGDLS 320
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+ G +H K L ++ + NAL+ MY KC +EE +F+ M R++VSW S++
Sbjct: 321 ALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMS 380
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +G ++ L KM+ + G PD I V+VL
Sbjct: 381 AYGRSGQGYDAVALFAKML--DSGQNPDSIAFVSVL 414
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 37/209 (17%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC ++ +G +VH+ + +N FI N L+ MY CG ++R+V D + R
Sbjct: 143 VLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNA-LVAMYGKCGCLREARKVLDQMPYR 201
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN++V+G+ ++ + D L I E+ S L D T
Sbjct: 202 DVVSWNSMVAGYAQSGQFDDALEICKEMDS-LNLNHDAGT-------------------- 240
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
S + + Y V+ + +FE M ++NL+SWN +I + N
Sbjct: 241 -------------MASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMP 287
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ L ++M C G PD +T+ ++LP
Sbjct: 288 NEAVSLFLQMEEC--GMKPDAVTIASLLP 314
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 99/203 (48%), Gaps = 9/203 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL ACG + +G+R+H+ + N ++ L+ MY+ CG ++R VFD ++ R
Sbjct: 312 LLPACGDLSALFLGRRLHKYIEKGNLRPN-LLLENALLDMYAKCGCLEEARDVFDKMRLR 370
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGS 220
++ W +++S + ++ D +++F ++ D+ PD+ F V+ AC G+ D G
Sbjct: 371 DVVSWTSMMSAYGRSGQGYDAVALFAKM-LDSGQNPDSIAFVSVLSACSHTGLLDQG-RH 428
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICG---F 276
M + G++ + ++ ++G+ VEE + MP E N W +++
Sbjct: 429 YFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVH 488
Query: 277 SENGFSCESFDLLIKMMGCEEGF 299
S+ + DLL ++ + G+
Sbjct: 489 SKMDIGLVAADLLFQLAPKQSGY 511
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 112/199 (56%), Gaps = 4/199 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
D+ G++VH + + S F+ NT L+ MY+ CG + ++F+ + RNL WN+++
Sbjct: 10 DVREGEKVHSIAIRNGFESLVFVQNT-LVHMYAACGHAESAHKLFELMAERNLVTWNSVI 68
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
+G+ N + L++F E+ ++PD FT ++ AC + + G H K+GL
Sbjct: 69 NGYALNGRPNEALTLFREMGLRG-VEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGL 127
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
G++ NAL+ +Y KC + + K+F+ M E+++VSW S+I G + NGF E+ +L +
Sbjct: 128 DGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKE 187
Query: 292 MMGCEEGFIPDVITVVTVL 310
+ +G +P IT V VL
Sbjct: 188 LE--RKGLMPSEITFVGVL 204
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 208 KACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLV 267
+A + DV G VH +A + G VFV N L+ MY C E KLFE+M ERNLV
Sbjct: 3 RAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLV 62
Query: 268 SWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+WNS+I G++ NG E+ L + MG G PD T+V++L
Sbjct: 63 TWNSVINGYALNGRPNEALTLF-REMGL-RGVEPDGFTMVSLL 103
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 111/197 (56%), Gaps = 3/197 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL--K 160
+L+AC + G+++H +V+ SN F+ N+ LI MY G+ L +R +FD + +
Sbjct: 98 VLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNS-LIDMYFKAGYLLLARHLFDEMFVR 156
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN+ WNA+++G+ +NE Y+D + +F + + P++ T V+ AC + + G
Sbjct: 157 DRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAHLGALDLGK 216
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+ G ++ + +F+ NAL MY KC + E ++F M ER+++SW+ IICG + G
Sbjct: 217 WIDGFISRREMALGLFLGNALADMYAKCGCITEARRVFNKMEERDVISWSIIICGLAMYG 276
Query: 281 FSCESFDLLIKMMGCEE 297
+ E+F +M+ C E
Sbjct: 277 HADEAFGCFYEMLDCGE 293
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 90/160 (56%), Gaps = 4/160 (2%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF-VELSSDTELKPDNFTFPCVIKACGGI 213
+F L + N+F NA + +N + + F ++SS PD FTF V+KAC G+
Sbjct: 46 IFAHLASPNIFAHNATLKALAQNSHWFHAIQFFNHQVSSPNAPNPDEFTFTSVLKACAGL 105
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM--PERNLVSWNS 271
A V G +H M K G ++FV N+LI MY K ++ LF+ M +RN+V WN+
Sbjct: 106 AHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLARHLFDEMFVRDRNVVCWNA 165
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+I G+++N ++ ++ +MM G +P+ +T+V+VLP
Sbjct: 166 MIAGYAQNEKYSDAIEVF-RMMQQFGGVVPNDVTLVSVLP 204
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 128/235 (54%), Gaps = 4/235 (1%)
Query: 77 SKSLNKALSLLQENLHNADLKE-ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
++ + ++LS+ + L L G LLQ+ + K + G+++H + + + N+ +
Sbjct: 38 AQMVERSLSMREHPLQQYPLTSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYL 97
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
NT+L Y+ CG + +FD + +N F WN ++ G+ N L L ++ E+ +
Sbjct: 98 NTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQ 157
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
+ DNFT+P V+KACG + V G VH GL D++V N+L+AMY K +
Sbjct: 158 -RADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTAR 216
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ M ER+L SWN++I G+++N S +F L+ +MG + G D T++ +L
Sbjct: 217 MVFDRMAERDLTSWNTMISGYAKNADSGTAF-LVFDLMG-KAGLFADCTTLLGLL 269
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHEL-VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL AC K ++ GK +H V S N F N+ LI MY C +D+RR+F+ ++
Sbjct: 268 LLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNS-LIEMYCNCNCMVDARRLFERVRW 326
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ WN+++ G+ +N + L +F ++ D PD TF V+ AC IA + +G
Sbjct: 327 KDTVSWNSMILGYARNGDAFESLRLFRRMALDGS-GPDQVTFIAVLGACDQIAALRYGMS 385
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K G + V AL+ MY KC + ++F+ MP+++LVSW++++ G+ +G
Sbjct: 386 IHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGR 445
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L M IPD ++L
Sbjct: 446 GREAISILDGMKA--NSVIPDNGVFTSIL 472
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 116/196 (59%), Gaps = 6/196 (3%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
K +H L+ + + + FI +TRL+ +Y+ G SR FD + ++++ WN+++S +
Sbjct: 135 AKCLHALLVVAGKVQSIFI-STRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYV 193
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
N + + + F +L +E++PD +TFP V+KACG + D G +H A K+G +V
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWNV 250
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
FV+ +LI MY + F LF+ MP R++ SWN++I G +NG + ++ D+L +M
Sbjct: 251 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMR-- 308
Query: 296 EEGFIPDVITVVTVLP 311
EG + +TVV++LP
Sbjct: 309 LEGIKMNFVTVVSILP 324
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 116/244 (47%), Gaps = 26/244 (10%)
Query: 85 SLLQENLHNADLKEATGV-------------------LLQACGHEKDIEIGKRVHELVSA 125
S++ +HN EA G +L+ACG D G+R+H +
Sbjct: 187 SMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIH-CWAF 242
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
F + + LI MYS GF +R +FD + R++ WNA++SG +N L
Sbjct: 243 KLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALD 302
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
+ E+ + +K + T ++ C + D+ +H K GL D+FVSNALI MY
Sbjct: 303 VLDEMRLEG-IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMY 361
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
K +E+ K F+ M ++VSWNSII + +N + +KM GF PD++T
Sbjct: 362 AKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQ--LNGFQPDLLT 419
Query: 306 VVTV 309
+V++
Sbjct: 420 LVSL 423
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 107/208 (51%), Gaps = 2/208 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L +D + + VH + D +I ++ MY+ G + +VF+ + +
Sbjct: 423 LASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVK 482
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN L++G+ +N L ++ + ++ + E+ P+ T+ ++ A + + G +
Sbjct: 483 DVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRI 542
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K L DVFV+ LI +YGKC + + + LF +P+ + V+WN+II +G +
Sbjct: 543 HGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHA 602
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M+ +EG PD +T V++L
Sbjct: 603 EKTLKLFGEML--DEGVKPDHVTFVSLL 628
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 2/160 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L A H ++ G R+H V T D + T LI +Y CG +D+ +F +
Sbjct: 526 ILPAYAHVGALQQGMRIHGRV-IKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE 584
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA++S + L +F E+ D +KPD+ TF ++ AC V G
Sbjct: 585 SSVTWNAIISCHGIHGHAEKTLKLFGEML-DEGVKPDHVTFVSLLSACSHSGFVEEGKWC 643
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ + G+ + ++ + G+ ++E + MP
Sbjct: 644 FRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMP 683
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
F +H + G + +F+S L+ +Y V F+ +P++++ +WNS+I +
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYV 193
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
NG E+ +++ E PD T VL
Sbjct: 194 HNGHFHEAIGCFYQLLLVSE-IRPDFYTFPPVL 225
>gi|302820671|ref|XP_002992002.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
gi|300140244|gb|EFJ06970.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
Length = 620
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 116/211 (54%), Gaps = 6/211 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ACG +D+++ +++H +A N + ++ MY+ CG LD+++ FDSL+ +
Sbjct: 148 LLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDTKKAFDSLEEK 207
Query: 163 NLFQWNALVSGF--TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
L W+ +++ + +K+ F E+ ++ +KP TF + AC +A + G
Sbjct: 208 GLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEAEG-IKPGEVTFVSALDACAAMATLEHGR 266
Query: 221 GVHGMAAKMGLIGDVFV-SNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H AA G + V N +I MYGKC + +F+ MPE+ L+SWNS+I ++ N
Sbjct: 267 SMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHN 326
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + E+ L +M+ +GF PD T V++L
Sbjct: 327 GHALEALSSLQEML--LQGFDPDSGTSVSIL 355
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 113/242 (46%), Gaps = 36/242 (14%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+ L AC +++ G+++H V S SN II+ L+ MY C + +VFD +
Sbjct: 15 IALDACAASGELDHGRQIHSSVVDSGLTSN-IIISNSLVNMYGKCQDVPCAEKVFDGMLL 73
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIF---------------------------VELSSDT 194
R++ W A+++ + +N ++ L +F +EL
Sbjct: 74 RDVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGM 133
Query: 195 E---LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD-VFVSNALIAMYGKCAF 250
E L+ + FT +++ACGG+ D+ +H AA G G+ V N+++ MY +C
Sbjct: 134 ELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGS 193
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGF--SENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
+ + K F+ + E+ LV+W+ ++ + S++G +F +M EG P +T V+
Sbjct: 194 LLDTKKAFDSLEEKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEA--EGIKPGEVTFVS 251
Query: 309 VL 310
L
Sbjct: 252 AL 253
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
+PD F + AC ++ G +H GL ++ +SN+L+ MYGKC V K
Sbjct: 7 RPDKVVFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQDVPCAEK 66
Query: 257 LFEVMPERNLVSWNSIICGFSENG 280
+F+ M R++VSW +++ +++NG
Sbjct: 67 VFDGMLLRDVVSWTAMLAVYAQNG 90
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 105/184 (57%), Gaps = 4/184 (2%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
KEA V+L I+ ++H + + D + +L+ YS G +R +F
Sbjct: 38 KEACEVILD---QYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIF 94
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
D +N+ +N ++ + N LY + LSIF + S PD++TFPCV+KAC G+ ++
Sbjct: 95 DRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLS-CAFNPDHYTFPCVLKACSGLDNL 153
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G VH K+GL ++F+ NAL+AMYGKC + E K+ + MP R++VSWNS++ G+
Sbjct: 154 RVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGY 213
Query: 277 SENG 280
+++G
Sbjct: 214 AQSG 217
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 87/156 (55%), Gaps = 3/156 (1%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
+F+ + +NL WN +++ + N + + +S+F+++ + +KPD T ++ ACG ++
Sbjct: 262 MFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQME-ECGMKPDAVTIASLLPACGDLS 320
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+ G +H K L ++ + NAL+ MY KC +EE +F+ M R++VSW S++
Sbjct: 321 ALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMS 380
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +G ++ L KM+ + G PD I V+VL
Sbjct: 381 AYGRSGQGYDAVALFAKML--DSGQNPDSIAFVSVL 414
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 37/209 (17%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC ++ +G +VH+ + +N FI N L+ MY CG ++R+V D + R
Sbjct: 143 VLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNA-LVAMYGKCGCLREARKVLDQMPYR 201
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN++V+G+ ++ + D L I E+ S L D T
Sbjct: 202 DVVSWNSMVAGYAQSGQFDDALEICKEMDS-LNLNHDAGT-------------------- 240
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
S + + Y V+ + +FE M ++NL+SWN +I + N
Sbjct: 241 -------------MASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMP 287
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ L ++M C G PD +T+ ++LP
Sbjct: 288 NEAVSLFLQMEEC--GMKPDAVTIASLLP 314
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 99/203 (48%), Gaps = 9/203 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL ACG + +G+R+H+ + + ++ L+ MY+ CG ++R VFD ++ R
Sbjct: 312 LLPACGDLSALFLGRRLHKYIEKGN-LQPNLLLENALLDMYAKCGCLEEARDVFDKMRLR 370
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGS 220
++ W +++S + ++ D +++F ++ D+ PD+ F V+ AC G+ D G
Sbjct: 371 DVVSWTSMMSAYGRSGQGYDAVALFAKM-LDSGQNPDSIAFVSVLSACSHTGLLDQG-RH 428
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICG---F 276
M + G++ + ++ ++G+ VEE + MP E N W +++
Sbjct: 429 YFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVH 488
Query: 277 SENGFSCESFDLLIKMMGCEEGF 299
S+ + DLL ++ + G+
Sbjct: 489 SKMDIGLVAADLLFQLAPKQSGY 511
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+A ++ G+ +H V+ F + + L+ +Y+ CG + +VF+ +K R
Sbjct: 124 LLKAISKSLNVREGEAIHS-VTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKER 182
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN++++GF N + L++F E+S + ++PD FT ++ A + + G V
Sbjct: 183 DLVAWNSMINGFALNGRPNEALTLFREMSVEG-VEPDGFTVVSLLSASAELGALELGRRV 241
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K+GL + V+N+L+ +Y KC + E ++F M ERN VSW S+I G + NGF
Sbjct: 242 HVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFG 301
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L +M G +G +P IT V VL
Sbjct: 302 EEALELFKEMEG--QGLVPSEITFVGVL 327
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 105/209 (50%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHEL-VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LLQ C K K++H + +N + + T+ SL + VF +
Sbjct: 23 LLQFCASSK--HKLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHN 80
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
N+F WN ++ G+ +++ + + ++ ++PD T+P ++KA +V G
Sbjct: 81 PNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSC-VEPDTHTYPFLLKAISKSLNVREGEA 139
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H + + G VFV N+L+ +Y C E K+FE+M ER+LV+WNS+I GF+ NG
Sbjct: 140 IHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGR 199
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M EG PD TVV++L
Sbjct: 200 PNEALTLFREM--SVEGVEPDGFTVVSLL 226
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 110/209 (52%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C +D G+++H V T + + L+ +Y CG+ DSRRVFD + R
Sbjct: 115 VLPVCAGLEDGVTGRQIHCYV-VKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISER 173
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WNA+++ E D L +F L D +KP++ TF ++ + FG +
Sbjct: 174 NGVSWNAIITSLAYLERNQDALEMF-RLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEI 232
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + + GL D+FV+NALI MY K + +F + E+N+VSWN+++ F++N
Sbjct: 233 HGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLE 292
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ DL+ +M +G IP+ +T VLP
Sbjct: 293 LAAVDLVRQMQA--DGEIPNSVTFTNVLP 319
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 113/212 (53%), Gaps = 9/212 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC ++ G+ +H +V F +D + L+ Y CG D +RVFD + R
Sbjct: 13 VLKACADSLSVQKGREIHGVV-FKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLER 71
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+++ F+ + Y + + +F E++ + +P+ + V+ C G+ D G +
Sbjct: 72 DVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQI 131
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS---EN 279
H K GL V V NAL+ +YGKC +V++ ++F+ + ERN VSWN+II + N
Sbjct: 132 HCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERN 191
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ E F L+I + G P+ +T ++LP
Sbjct: 192 QDALEMFRLMI-----DGGVKPNSVTFSSMLP 218
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 5/200 (2%)
Query: 111 KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNAL 170
K + GK +H S +D + LI MY+ G L + VF+ + +N+ WNA+
Sbjct: 224 KLFDFGKEIHGF-SLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAM 282
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
V+ F +N L + + ++ +D E+ P++ TF V+ AC I + G +H A + G
Sbjct: 283 VANFAQNRLELAAVDLVRQMQADGEI-PNSVTFTNVLPACARIGFLRPGKEIHARAIRTG 341
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
D+FVSNAL MY KC + ++F++ R+ VS+N +I G+S+ ES L +
Sbjct: 342 SSVDLFVSNALTDMYAKCGCLNLARRVFKI-SLRDEVSYNILIIGYSQTTNCSESLRLFL 400
Query: 291 KMMGCEEGFIPDVITVVTVL 310
+M +G DV++ + V+
Sbjct: 401 EM--GIKGMKLDVVSYMGVI 418
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
++ D+ TFP V+KAC V G +HG+ K+G DVFV N L+ YG C ++++
Sbjct: 3 VRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVK 62
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++F+ M ER++VSWNS+I FS +GF E+ L + M GF P+++++V+VLP
Sbjct: 63 RVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCE-MNLRSGFRPNMVSIVSVLP 117
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 107/208 (51%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + GK +H + T S D ++ L MY+ CG +RRVF + R
Sbjct: 317 VLPACARIGFLRPGKEIHAR-AIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF-KISLR 374
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ +N L+ G+++ ++ L +F+E+ +K D ++ VI AC +A + G V
Sbjct: 375 DEVSYNILIIGYSQTTNCSESLRLFLEMGIKG-MKLDVVSYMGVISACANLAALKQGKEV 433
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+A + L +F++NAL+ Y KC ++ K+F +P R+ SWNS+I G+ G
Sbjct: 434 HGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGEL 493
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L M E+G D ++ + VL
Sbjct: 494 TIAINLFEAMK--EDGVEYDSVSYIAVL 519
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 11/214 (5%)
Query: 71 TTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFS 130
TT C ES L + + L D+ GV+ AC + ++ GK VH L +
Sbjct: 389 TTNCSESLRLFLEMGIKGMKL---DVVSYMGVI-SACANLAALKQGKEVHGLAVRKHLHT 444
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
+ FI N L+ Y CG + +VF + +R+ WN+++ G+ T +++F +
Sbjct: 445 HLFIANA-LLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAM 503
Query: 191 SSDTELKPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
D ++ D+ ++ V+ AC GG+ + G H + + ++ + G+
Sbjct: 504 KEDG-VEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQNIKPTQMHYA--CMVDLLGRA 560
Query: 249 AFVEEMVKLFEVMP-ERNLVSWNSIICGFSENGF 281
+EE VKL E +P E + W +++ +G+
Sbjct: 561 GLIEEAVKLIESLPIEPDANVWGALLGACRIHGY 594
>gi|147765322|emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
Length = 625
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 119/205 (58%), Gaps = 7/205 (3%)
Query: 110 EKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNA 169
K +++ ++ H + S S + + T+LI Y++C P SR VFDSL+ +N+F WN+
Sbjct: 36 HKSLKLTRQSHSRI-LSLGLSQNSFLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNS 94
Query: 170 LVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM 229
L++G KN LY + +F ++ S +++ PD+FT + K + + G +HG + +
Sbjct: 95 LINGCVKNRLYNEAFQLFNQMCS-SDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRT 153
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG---FSCESF 286
G + D V+N++++MY KC +E K+F+ M RN SWN +I G++ +G F E++
Sbjct: 154 GFVSDTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETW 213
Query: 287 DLLIKMMGCEEGFIPDVITVVTVLP 311
+ +K M +E PD T+ ++LP
Sbjct: 214 E-FVKQMQMDE-VRPDAYTISSLLP 236
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 97/173 (56%), Gaps = 3/173 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI MYS + RRVFD +K RN+F W A+++G+ +N + LS+F ++ ++P
Sbjct: 274 LIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGVEP 333
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ + V+ AC + + G +HG A + L +V + NALI MY KC ++ ++F
Sbjct: 334 NRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVF 393
Query: 259 EVMPE-RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E ++ +SW+S+I G+ +G E+ L KM+ + G PD+IT V +L
Sbjct: 394 EDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKML--QAGIRPDMITTVGIL 444
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 109/205 (53%), Gaps = 13/205 (6%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF- 174
GK +H S T F +D ++ +++MY CG +SR+VFD + RN WN L++G+
Sbjct: 143 GKSIHG-KSIRTGFVSDTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYA 201
Query: 175 -TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG---FGSGVHGMAAK-- 228
+ N + + FV+ E++PD +T ++ C G D+G +G +H K
Sbjct: 202 VSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDG--DMGKWDYGRELHCYIVKNE 259
Query: 229 --MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
+GL DV + LI MY + V ++F+ M RN+ SW ++I G+ ENG S E+
Sbjct: 260 LVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEAL 319
Query: 287 DLLIKMMGCEEGFIPDVITVVTVLP 311
L + M +G P+ +++V+VLP
Sbjct: 320 SLF-RDMQVIDGVEPNRVSLVSVLP 343
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGV----LLQACGHEKDIEIGKRVHELVSASTQFSN 131
E+ ++ALSL ++ + D E V +L AC + G+++H + + +N
Sbjct: 311 ENGDSDEALSLFRD-MQVIDGVEPNRVSLVSVLPACSSFSGLLSGRQIHGF-AVRKELNN 368
Query: 132 DFIINTRLITMYSLCGFPLDSRRVF--DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE 189
+ + LI MYS CG +RRVF DSL ++ W++++SG+ + + + ++ +
Sbjct: 369 EVSLCNALIDMYSKCGSLDSARRVFEDDSL-CKDAISWSSMISGYGLHGKGQEAILLYDK 427
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH-GMAAKMGLIGDVFVSNALIAMYGKC 248
+ ++PD T ++ ACG V G ++ + G+ + + ++ M G+
Sbjct: 428 MLQ-AGIRPDMITTVGILSACGRSGLVNEGLNIYSSVINDYGIEPTLEICACIVDMLGRA 486
Query: 249 AFVEEMVKLFEVMP 262
++ + + +P
Sbjct: 487 GQLDRALDFIKAIP 500
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 113/197 (57%), Gaps = 8/197 (4%)
Query: 117 KRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
K++H L+ QFS F+I T+LI S G +R+VFD L +F WNA++ G++
Sbjct: 38 KQIHARLLVLGLQFSG-FLI-TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+N + D L ++ + + PD+FTFP ++KAC G++ + G VH ++G DV
Sbjct: 96 RNNHFQDALLMYSNMQL-ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 236 FVSNALIAMYGKCAFVEEMVKLFE--VMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
FV N LIA+Y KC + +FE +PER +VSW +I+ +++NG E+ ++ +M
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR 214
Query: 294 GCEEGFIPDVITVVTVL 310
+ PD + +V+VL
Sbjct: 215 KMD--VKPDWVALVSVL 229
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 110/202 (54%), Gaps = 8/202 (3%)
Query: 111 KDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNA 169
+D++ G+ +H +V + D +I+ L TMY+ CG ++ +FD +K+ NL WNA
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLIS--LNTMYAKCGQVATAKILFDKMKSPNLILWNA 293
Query: 170 LVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM 229
++SG+ KN + + +F E+ + +++PD + I AC + + ++ +
Sbjct: 294 MISGYAKNGYAREAIDMFHEMI-NKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS 352
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL 289
DVF+S+ALI M+ KC VE +F+ +R++V W+++I G+ +G + E+ L
Sbjct: 353 DYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLY 412
Query: 290 IKMMGCEEGFI-PDVITVVTVL 310
M E G + P+ +T + +L
Sbjct: 413 RAM---ERGGVHPNDVTFLGLL 431
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-- 160
LL+AC +++G+ VH V F D + LI +Y+ C +R VF+ L
Sbjct: 125 LLKACSGLSHLQMGRFVHAQV-FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLP 183
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R + W A+VS + +N + L IF ++ ++KPD V+ A + D+ G
Sbjct: 184 ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK-MDVKPDWVALVSVLNAFTCLQDLKQGR 242
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H KMGL + + +L MY KC V LF+ M NL+ WN++I G+++NG
Sbjct: 243 SIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ E+ D+ +M+ + PD I++ + +
Sbjct: 303 YAREAIDMFHEMI--NKDVRPDTISITSAI 330
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 104/179 (58%), Gaps = 2/179 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+ AC K+++ +++H + AS++F D ++ LI +Y CG +++ +VFD ++
Sbjct: 56 AFITACAQSKNLDDARKIHGHL-ASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRK 114
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+++ W +L++G+ +N++ + + + + KP+ FTF ++KA G AD G G
Sbjct: 115 KDMVSWTSLIAGYAQNDMPAEAIGLLPGMLK-GRFKPNGFTFASLLKAAGAYADSGIGGQ 173
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H +A K DV+V +AL+ MY +C ++ +F+ + +N VSWN++I GF+ G
Sbjct: 174 IHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKG 232
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+A G D IG ++H L + + D + + L+ MY+ CG + VFD L ++
Sbjct: 158 LLKAAGAYADSGIGGQIHAL-AVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSK 216
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WNAL+SGF + L +F E+ + + +FT+ + GI + G V
Sbjct: 217 NGVSWNALISGFARKGDGETALMVFAEMQRNG-FEATHFTYSSIFSGLAGIGALEQGKWV 275
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K FV N ++ MY K + + K+FE + ++LV+WNS++ F++ G
Sbjct: 276 HAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLG 335
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +M + G + IT + +L
Sbjct: 336 KEAVSHFEEMR--KSGIYLNQITFLCIL 361
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
EL P + I AC ++ +HG A GD F+ N+LI +Y KC V E
Sbjct: 46 ELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEA 105
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F+ M ++++VSW S+I G+++N E+ LL M+ F P+ T ++L
Sbjct: 106 HKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGR--FKPNGFTFASLL 159
>gi|255542118|ref|XP_002512123.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549303|gb|EEF50792.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 456
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 113/210 (53%), Gaps = 5/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G+L+ AC + GK H S N +++ T L+ MY CG D+R VFD L
Sbjct: 108 GILVTACTKLGALHQGKCFHGYAIKSGVQLNSYLM-TALLDMYVKCGVIRDARSVFDELS 166
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ +L W A++ G+T++ L D L +F++ + P++ T + AC + ++ G
Sbjct: 167 SIDLVSWTAMIVGYTQSNLSYDALKLFLD-KKWAGILPNDVTIVSALAACARMGNLNLGR 225
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG+A K+G + + NAL+ MY KC + LFE E+++VSWNSII G S+ G
Sbjct: 226 SIHGLAIKLGF-AEPTLMNALVHMYAKCHMNRDASYLFETASEKDVVSWNSIISGCSQMG 284
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL +M +E PD +T+V+V
Sbjct: 285 SPYEALDLFQRMR--KESVSPDAVTLVSVF 312
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 106/208 (50%), Gaps = 6/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC ++ +G+ +H L + F+ ++N L+ MY+ C D+ +F++ ++
Sbjct: 212 LAACARMGNLNLGRSIHGL-AIKLGFAEPTLMNA-LVHMYAKCHMNRDASYLFETASEKD 269
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN+++SG ++ + L +F + ++ + PD T V AC + + GS +H
Sbjct: 270 VVSWNSIISGCSQMGSPYEALDLFQRMRKES-VSPDAVTLVSVFSACASLGALQVGSSLH 328
Query: 224 GMAAKMGLIG-DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ K GL+ +V+VS AL+ Y KC +F+ M E+N V+W+++I G+ G +
Sbjct: 329 AYSVKEGLLSSNVYVSTALLTFYAKCGDAGSARTIFDGMQEKNTVTWSAMIGGYGVQGDA 388
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
S + M+ + P+ + T+L
Sbjct: 389 GGSLSIFNDML--RQELKPNEVIFTTIL 414
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 109/210 (51%), Gaps = 7/210 (3%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++AC +DI+ G+++H +++ A D + T L Y+ CG SR FD
Sbjct: 10 FIRACSELRDIDEGRKLHCQIIKAGPP---DSFVLTGLTDFYAKCGEIECSRCAFDENLD 66
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
RN+ W +++ G+ +N+ + L +F + + ++ + FT ++ AC + + G
Sbjct: 67 RNVVSWTSMIVGYVQNDCPVEGLILFNRMR-EGLIEGNQFTLGILVTACTKLGALHQGKC 125
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
HG A K G+ + ++ AL+ MY KC + + +F+ + +LVSW ++I G++++
Sbjct: 126 FHGYAIKSGVQLNSYLMTALLDMYVKCGVIRDARSVFDELSSIDLVSWTAMIVGYTQSNL 185
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
S ++ L + G +P+ +T+V+ L
Sbjct: 186 SYDALKLFLDKK--WAGILPNDVTIVSALA 213
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 3/163 (1%)
Query: 59 ASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVL--LQACGHEKDIEIG 116
AS + + I + C + S +AL L Q + +A ++ AC +++G
Sbjct: 265 ASEKDVVSWNSIISGCSQMGSPYEALDLFQRMRKESVSPDAVTLVSVFSACASLGALQVG 324
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
+H S++ ++T L+T Y+ CG +R +FD ++ +N W+A++ G+
Sbjct: 325 SSLHAYSVKEGLLSSNVYVSTALLTFYAKCGDAGSARTIFDGMQEKNTVTWSAMIGGYGV 384
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
LSIF ++ ELKP+ F ++ AC VG G
Sbjct: 385 QGDAGGSLSIFNDMLRQ-ELKPNEVIFTTILSACSHTGMVGEG 426
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 106/190 (55%), Gaps = 3/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC ++ G+ VH V + SN + N LI MY+ CG ++R VF + +
Sbjct: 678 IVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNA-LINMYAKCGSVEEARLVFSKIPVK 736
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN ++ G+++N L + L +F+++ + KPD+ T CV+ AC G+A + G +
Sbjct: 737 DIVSWNTMIGGYSQNSLPNEALELFLDMQK--QFKPDDITMACVLPACAGLAALDKGREI 794
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + G D+ V+ AL+ MY KC + LF+++P+++L+SW +I G+ +GF
Sbjct: 795 HGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFG 854
Query: 283 CESFDLLIKM 292
E+ +M
Sbjct: 855 NEAISTFNEM 864
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 6/217 (2%)
Query: 95 DLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRR 154
DL VL+ A + ++ +G+ +H FS + + + L+ MYS CG +
Sbjct: 570 DLTTLVSVLV-AWANIGNLSLGRALHGF-GVKACFSEEVVFSNTLLDMYSKCGNLNGATE 627
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VF + + W + ++ + + LY+D + +F E+ S ++PD +T ++ AC +
Sbjct: 628 VFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKG-VRPDIYTVTSIVHACACSS 686
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+ G VH K G+ ++ V+NALI MY KC VEE +F +P +++VSWN++I
Sbjct: 687 SLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 746
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G+S+N E+ +L + M ++ F PD IT+ VLP
Sbjct: 747 GYSQNSLPNEALELFLDM---QKQFKPDDITMACVLP 780
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQ C +K +E GKRVH ++ S S D + +L+ MY CG + R++FD +
Sbjct: 375 VLQLCAEKKSLEDGKRVHSVI-ISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 433
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+F WN L+S + K + + +S+F ++ + + +TF CV+K + V V
Sbjct: 434 KVFLWNLLMSEYAKIGNFRESVSLFKKMQK-LGVVGNCYTFTCVLKCFAALGKVKECKRV 492
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K+G + V N+LIA Y K VE LF+ + E ++VSWNS+I G NGFS
Sbjct: 493 HGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFS 552
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ I+M+ G D+ T+V+VL
Sbjct: 553 GNGLEIFIQMLIL--GVEVDLTTLVSVL 578
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 114/204 (55%), Gaps = 4/204 (1%)
Query: 107 CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQ 166
C KD+ +G VH + ++ D +++ +I MY CG L +R VFD L++RN+
Sbjct: 244 CASLKDLRLGLHVHGKM-LTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVL 302
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
W A+++ +N + + L++F ++ + +K + FT+ ++ AC G++ GS +HG +
Sbjct: 303 WTAVMASCFQNGCFEEALNLFSKMEQEN-VKSNEFTYAVLLNACAGLSARRNGSLLHGHS 361
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
K G V V NALI MY K +E K+F M R++++WN++ICGFS +G ++
Sbjct: 362 EKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKAL 421
Query: 287 DLLIKMMGCEEGFIPDVITVVTVL 310
+ M+ EE P+ +T VL
Sbjct: 422 LVFQDMLAAEEH--PNYVTFTGVL 443
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL+ K++++GK +H L+ S N I LI Y+ + +FD +
Sbjct: 35 LLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPE 94
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
RN+ W+AL++G+ N V+ + ++ S+ + P+ + I +C V G
Sbjct: 95 RNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQ 154
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
HG+ K G +V NAL++MY KC+ V++ + ++ +P ++V++NSI+ ENG+
Sbjct: 155 CHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGY 214
Query: 282 SCESFDLLIKMM 293
E ++L M+
Sbjct: 215 LREGLEVLRSMV 226
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 5/214 (2%)
Query: 82 KALSLLQENLHNADLKEATGVL---LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
K + LL++ + ++ +L + +C +E G++ H L+ T FS +
Sbjct: 115 KVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLL-LKTGFSFHNYVRNA 173
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L++MYS C D+ V++ + ++ +N+++S +N + L + + S++ +K
Sbjct: 174 LVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSES-VKW 232
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D TF C + D+ G VHG + D +VS+A+I MYGKC +F
Sbjct: 233 DKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVF 292
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ + RN+V W +++ +NG E+ +L KM
Sbjct: 293 DGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKM 326
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 124/208 (59%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC KD+ +GK+VH +V + S++F+ N+ L+ +Y+ CG D+R +FD++ R
Sbjct: 16 VLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANS-LVILYAKCGGFGDARSLFDAIPDR 74
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNAL S + ++++ + +S+F ++ + ++P+ F+ +I C G+ D G +
Sbjct: 75 SVVSWNALFSCYVHSDMHGEAVSLFHDMVL-SGIRPNEFSLSSMINVCTGLEDSVQGRKI 133
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K+G D F +NAL+ MY K +E+ +F+ + + ++VSWN+II G + +
Sbjct: 134 HGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYH 193
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +LL +M + G P++ T+ + L
Sbjct: 194 HRALELLREMN--KSGMCPNMFTLSSAL 219
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 109/194 (56%), Gaps = 4/194 (2%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
+++H L S +++++N+ LI Y CG D+ RVF+ +L + +LV+ + +
Sbjct: 333 RQIHALSLKSGFEFDNYVVNS-LIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQ 391
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF 236
+ + L +++E+ D +KPD+F ++ AC ++ G VH K G + D+F
Sbjct: 392 DGQGEEALRLYLEMQ-DRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIF 450
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCE 296
N+L+ MY KC +E+ F +P R +VSW+++I G +++G+ E+ L +M+ +
Sbjct: 451 AGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQML--K 508
Query: 297 EGFIPDVITVVTVL 310
G P+ IT+V+VL
Sbjct: 509 VGVPPNHITLVSVL 522
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 108/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ C +D G+++H + S+ F N L+ MY+ G D+ VFD +
Sbjct: 117 MINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANA-LVDMYAKVGILEDASSVFDEIAKP 175
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA+++G +E + L + E++ + + P+ FT +KAC G+A G +
Sbjct: 176 DIVSWNAIIAGCVLHEYHHRALELLREMNK-SGMCPNMFTLSSALKACAGMALRELGRQL 234
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H KM + D F+ LI MY KC +++ +F++MPER++++WN++I G S+N
Sbjct: 235 HSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEED 294
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M EG + T+ TVL
Sbjct: 295 EEAASLFPLMH--TEGIGFNQTTLSTVL 320
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+AC E+G+++H + S+ F+ LI MYS C D+R VF + R+
Sbjct: 219 LKACAGMALRELGRQLHSSLIKMDMGSDSFL-GVGLIDMYSKCNSMDDARLVFKLMPERD 277
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WNA++SG ++NE + S+F + ++ + + T V+K+ + +H
Sbjct: 278 MIAWNAVISGHSQNEEDEEAASLFPLMHTEG-IGFNQTTLSTVLKSIAALQANYMCRQIH 336
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
++ K G D +V N+LI YGKC VE+ ++FE P +LV + S++ ++++G
Sbjct: 337 ALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGE 396
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L ++M + G PD ++L
Sbjct: 397 EALRLYLEMQ--DRGIKPDSFVCSSLL 421
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%)
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
+K + F FP V+KAC D+ G VHG+ G D FV+N+L+ +Y KC +
Sbjct: 6 IKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDAR 65
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
LF+ +P+R++VSWN++ + + E+ L M+
Sbjct: 66 SLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMV 103
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 108/208 (51%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL C D++ G+ +H + + ++ I +ITMYS ++ + F S++ +
Sbjct: 208 LLGTCNSRDDLKRGELLH-CQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEK 266
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN +S + + L F E+ ++ ++PD FTF + AC G+A + G +
Sbjct: 267 DLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQI 326
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + L DV NALI MY KC + + +F M +NLVSWN++I GF +GF
Sbjct: 327 HGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFG 386
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F+L KM G PD +T V +L
Sbjct: 387 GKAFELFAKMK--TMGVKPDSVTFVGLL 412
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 114/213 (53%), Gaps = 7/213 (3%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
E G L+ C K + G +H ++ T +D I++ ++ +Y+ C ++R+VFD
Sbjct: 4 ELVGSLIHQCSKTKALRQGLPLHA-IAIKTATRSDVIVSNHILNLYAKCRKLREARQVFD 62
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
+ RNL W+A++SG+ + L +F +L+ + P+ + + VI AC + +
Sbjct: 63 EMSERNLVSWSAMISGYEQIGEPISALGLFSKLN----IVPNEYVYASVISACASLKGLV 118
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G +HG A K GL FVSNALI MY KC + + + E N V++N++I GF
Sbjct: 119 QGKQIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFV 178
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
EN + F++L +MM ++GF PD T V +L
Sbjct: 179 ENQQPDKGFEVL-RMM-YQDGFFPDRFTFVGLL 209
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 6/173 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFI--INTRLITMYSLCGFPLDSRRVFDSLK 160
++ AC K + GK++H + +F D + ++ LITMY CG D+ ++
Sbjct: 107 VISACASLKGLVQGKQIH---GQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEAL 163
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
N +NAL++GF +N+ + + D PD FTF ++ C D+ G
Sbjct: 164 ELNPVAYNALITGFVENQQPDKGFEVLRMMYQDG-FFPDRFTFVGLLGTCNSRDDLKRGE 222
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
+H K+ L F+ N +I MY K +EE K F + E++L+SWN+ I
Sbjct: 223 LLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFI 275
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 112/191 (58%), Gaps = 2/191 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ AC + + G+++H+ + ++ D I+N +++MY CG D+R VFD + R
Sbjct: 73 LICACSSSRSLAQGRKIHDHI-LNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 131
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL + ++++G+++N + + +++++ + +L PD F F +IKAC +DVG G +
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQE-DLVPDQFAFGSIIKACASSSDVGLGKQL 190
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K+ + NALIAMY + + + ++F +P ++L+SW+SII GFS+ GF
Sbjct: 191 HAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFE 250
Query: 283 CESFDLLIKMM 293
E+ L +M+
Sbjct: 251 FEALSHLKEML 261
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 122/234 (52%), Gaps = 5/234 (2%)
Query: 77 SKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
++++ L +LQE+L + A G +++AC D+ +GK++H V + S+ I
Sbjct: 150 AEAIRLYLKMLQEDL--VPDQFAFGSIIKACASSSDVGLGKQLHAQV-IKLESSSHLIAQ 206
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
LI MY D+ RVF + ++L W+++++GF++ + LS E+ S
Sbjct: 207 NALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVF 266
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
P+ + F +KAC + +GS +HG+ K L G+ +L MY +C F+ +
Sbjct: 267 HPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARR 326
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ + + SWN II G + NG++ E+ + +M GFIPD I++ ++L
Sbjct: 327 VFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRS--SGFIPDAISLRSLL 378
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 120/233 (51%), Gaps = 7/233 (3%)
Query: 81 NKALSLLQENLHNADLKEATGVLLQACGHEKDIEI--GKRVHELVSASTQFSNDFIINTR 138
++A+S+ + + + +A + C K + + G ++H + F D +
Sbjct: 353 DEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYI-IKWGFLADLTVCNS 411
Query: 139 LITMYSLCGFPLDSRRVFDSLKTR-NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L+TMY+ C +F+ + + WN +++ ++E ++L +F +L +E +
Sbjct: 412 LLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLF-KLMLVSECE 470
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
PD+ T +++ C I+ + GS VH + K GL + F+ N LI MY KC + + ++
Sbjct: 471 PDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRI 530
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ M R++VSW+++I G++++GF E+ L +M G P+ +T V VL
Sbjct: 531 FDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSA--GIEPNHVTFVGVL 581
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 150 LDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKA 209
L + V ++KT L N ++ K+ Y + L F ++ K T+ +I A
Sbjct: 19 LATSSVVSTIKTEELM--NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICA 76
Query: 210 CGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSW 269
C + G +H D ++N +++MYGKC + + ++F+ MPERNLVS+
Sbjct: 77 CSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSY 136
Query: 270 NSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
S+I G+S+NG E+ L +KM+ +E +PD
Sbjct: 137 TSVITGYSQNGQGAEAIRLYLKML--QEDLVPD 167
>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
Length = 848
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 112/201 (55%), Gaps = 6/201 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L +C + G+ +H ELV Q ++ + + L+TMYS CG D+ +F+++K
Sbjct: 363 VLSSCCLVGSYDFGRLIHAELVKRPIQ--SNVALQSALLTMYSKCGNSDDANSIFNTIKG 420
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ W +++SGF +N Y + L + ++ E KPD+ V+ AC G+ +V G
Sbjct: 421 RDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGE-KPDSDIMASVVSACTGLKNVNLGCT 479
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG+A K GL DVFV+++L+ MY K F + +F MP +NLV+WNSII + NG
Sbjct: 480 IHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGL 539
Query: 282 SCESFDLLIKMMGCEEGFIPD 302
S L +M + G PD
Sbjct: 540 PDLSISLFSQMT--QYGLFPD 558
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 4/206 (1%)
Query: 104 LQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L AC + + G +VH +LV F ND + T L+TMYS C D+ VFD + +
Sbjct: 263 LSACCQGEFVSFGMQVHCDLVKLG--FENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVK 320
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
WNA++S + N D L I+ ++ ++ PD+ T V+ +C + FG +
Sbjct: 321 KTELWNAMISAYVGNGRSYDGLKIYKQMKV-LQIPPDSLTATNVLSSCCLVGSYDFGRLI 379
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K + +V + +AL+ MY KC ++ +F + R++V+W S+I GF +N
Sbjct: 380 HAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKY 439
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVT 308
E+ + M E D++ V
Sbjct: 440 MEALEFYNSMTVYGEKPDSDIMASVV 465
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 9/211 (4%)
Query: 102 VLLQAC-GHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+LL A GH + K++H S F D + + LI MY CG PLD+ R+F L+
Sbjct: 161 ILLGASDGH---LGYAKQIHGY-SVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELE 216
Query: 161 TR-NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+ N+ WN ++ GF +N L+ + L +++ L+ + +K + +F + AC V FG
Sbjct: 217 DKGNVVAWNVMIGGFGENGLWENSLEVYL-LAKNENVKLVSASFTSTLSACCQGEFVSFG 275
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
VH K+G D +V +L+ MY KC VE+ +F+ + + WN++I + N
Sbjct: 276 MQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGN 335
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G S + + +M + PD +T VL
Sbjct: 336 GRSYDGLKIYKQMKVLQ--IPPDSLTATNVL 364
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 109/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC K++ +G +H L + + D + + L+ MYS FP S VF + +
Sbjct: 464 VVSACTGLKNVNLGCTIHGL-AIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLK 522
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL WN+++S + +N L +S+F +++ L PD+ + V+ + +A + G V
Sbjct: 523 NLVAWNSIISCYCRNGLPDLSISLFSQMTQ-YGLFPDSVSITSVLVSVSSVAVLRKGKAV 581
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + + D+ + NALI MY KC F++ +F+ M + NLV+WN +I G +G
Sbjct: 582 HGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGSHGDW 641
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M G PD IT +++L
Sbjct: 642 LKAMSLFDEMRSF--GIAPDDITFISLL 667
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 116/228 (50%), Gaps = 11/228 (4%)
Query: 69 EITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQ 128
+I TL ++ + ++ AL N NA + LL+ACG +++ GK +H +
Sbjct: 23 KIVTLVQQGQYVD-ALQFYSRNPLNAT-RFTYPSLLKACGFLSNLQYGKTIHSTIITKGF 80
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSL-----KTRNLFQWNALVSGFTKNELYTDV 183
F +D I T LI Y CG ++ +VFD L +++ WN++V+G+ + +
Sbjct: 81 FYSDPYITTSLINFYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEG 140
Query: 184 LSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIA 243
++ F + ++PD ++ ++ A G +G+ +HG + + GD F+ + LI
Sbjct: 141 IAQFCRMQL-FGVRPDAYSLCILLGASDG--HLGYAKQIHGYSVRKVFYGDPFLESGLIY 197
Query: 244 MYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSENGFSCESFDLLI 290
MY C + +LF+ + ++ N+V+WN +I GF ENG S ++ +
Sbjct: 198 MYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYL 245
>gi|298205132|emb|CBI40653.3| unnamed protein product [Vitis vinifera]
Length = 597
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 118/217 (54%), Gaps = 11/217 (5%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVS--ASTQFSNDFIINTRLITMYSLCGFPLDSRR 154
K + +LL+ C K++ H+ + ++ + T+L++++ G ++ R
Sbjct: 83 KHPSAILLELCTSMKEL------HQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAAR 136
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VF ++ + ++ ++ G+ +N D +S F + D ++P + F ++K CG A
Sbjct: 137 VFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDG-VRPVVYNFTYLLKVCGDNA 195
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
D+ G +H G +VF ++ MY KC VEE K+F+ MPER+LV WN+II
Sbjct: 196 DLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIIS 255
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G+++NGF + +L+++M EEG PD IT+V++LP
Sbjct: 256 GYAQNGFGKTALELVLRMQ--EEGKRPDSITIVSILP 290
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 2/159 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ CG D+ GK +H + + SN F + T ++ MY+ C ++ ++FD + R
Sbjct: 187 LLKVCGDNADLRKGKEIHCQLIVNGFASNVFAM-TGVVNMYAKCRLVEEAYKMFDRMPER 245
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN ++SG+ +N L + + + + + +PD+ T ++ A + + G +
Sbjct: 246 DLVCWNTIISGYAQNGFGKTALELVLRMQEEGK-RPDSITIVSILPAVADVGSLRIGRSI 304
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
HG + + G V VS AL+ MY KC V +F+ M
Sbjct: 305 HGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRM 343
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 32/209 (15%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L A + IG+ +H S F + ++T L+ MYS CG +R +FD +
Sbjct: 288 ILPAVADVGSLRIGRSIHGY-SMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTAM 346
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+FQ D +++ N T + AC + DV G V
Sbjct: 347 EIFQKMM-----------------------DEQVEMTNVTVMGALHACADLGDVEQGRFV 383
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + ++ L DV V N+LI+MY KC +LF++M ER++ +WN++I G+ +G
Sbjct: 384 HKLLDQLELGSDVSVMNSLISMYSKCK------RLFDMMDERHVTTWNAMIDGYGTHGLG 437
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ +L KM +E P+ +T + P
Sbjct: 438 KAALELFEKMK--KEVIKPNEVTFLCKTP 464
>gi|296083752|emb|CBI23741.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 123/233 (52%), Gaps = 34/233 (14%)
Query: 110 EKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNA 169
K +++ ++ H + S S + ++ T+LI Y++C P SR VFDSL+ +N+F WN+
Sbjct: 36 HKSLKLTRQSHSRI-LSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNS 94
Query: 170 LVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM 229
L++G+ KN LY + +F ++ S +++ PD+FT + K + + G +HG + ++
Sbjct: 95 LINGYAKNRLYNEAFQLFNQMCS-SDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRI 153
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS------------ 277
G + D V+N++++MY KC EE K+F+ M RN SWN +I G++
Sbjct: 154 GFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNLVVGRRVF 213
Query: 278 -------------------ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
ENG S E+ L + M +G P+ +++V+VLP
Sbjct: 214 DRMKCRNVFSWTAMINGYVENGDSDEALSLF-RDMQVIDGIEPNRVSLVSVLP 265
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 98/173 (56%), Gaps = 3/173 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI Y++ G + RRVFD +K RN+F W A+++G+ +N + LS+F ++ ++P
Sbjct: 196 LIAGYAVSGNLVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEP 255
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ + V+ AC + + G +HG A + L +V + NALI MY KC ++ ++F
Sbjct: 256 NRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVF 315
Query: 259 EVMPE-RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E ++ +SW+S+I G+ +G E+ L KM+ + G PD+IT V +L
Sbjct: 316 EDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKML--QAGIRPDMITTVGIL 366
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 91/194 (46%), Gaps = 11/194 (5%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGV----LLQACGHEKDIEIGKRVHELVSASTQFSN 131
E+ ++ALSL ++ + D E V +L AC + G+++H + + +N
Sbjct: 233 ENGDSDEALSLFRD-MQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGF-AVRKELNN 290
Query: 132 DFIINTRLITMYSLCGFPLDSRRVF--DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE 189
+ + LI MYS CG +RRVF DSL ++ W++++SG+ + + + ++ +
Sbjct: 291 EVSLCNALIDMYSKCGSLDSARRVFEDDSL-CKDAISWSSMISGYGLHGKGQEAILLYDK 349
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH-GMAAKMGLIGDVFVSNALIAMYGKC 248
+ ++PD T ++ AC V G ++ + G+ + + ++ M G+
Sbjct: 350 M-LQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRA 408
Query: 249 AFVEEMVKLFEVMP 262
++ + + MP
Sbjct: 409 GQLDPALDFIKAMP 422
>gi|297746037|emb|CBI16093.3| unnamed protein product [Vitis vinifera]
Length = 702
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 107/190 (56%), Gaps = 17/190 (8%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACGH D G+ +H ++ ++ F +D I + LI MYS CG + RVFD +
Sbjct: 376 ILKACGHLSDRRTGENMHTVILKNS-FESDAYIISALIYMYSKCGHVEKACRVFDWIP-- 432
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN L++GF++ D P + T ++ AC +A++ G +
Sbjct: 433 NVVSWNTLIAGFSQ--------------MLDQGFCPSSVTISSLLPACTNVANLRHGKEI 478
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A +G+ DV+V +AL+ MY KC ++ E LF +MPERN V+WNS+I G++ +G+
Sbjct: 479 HGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYC 538
Query: 283 CESFDLLIKM 292
E+ +L +M
Sbjct: 539 NEAIELFNQM 548
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 109/209 (52%), Gaps = 8/209 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L CG E +E+G+R H V S++F+ T LI MY+ CG + RV+D + + +
Sbjct: 120 LSFCGREGCVELGRRWHCFVVKIGLGSDEFVC-TSLIDMYAKCGEVDSAVRVYDKMTSLD 178
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
N L+S + +N + +F+++ + +P+++T+ ++ CG I+ + G +H
Sbjct: 179 AATCNCLISAYARNGFFVQAFQVFMQIG-NMGTRPNHYTYSTMLAVCGTISAIQEGKQLH 237
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
KM + + V NAL+ +Y KC +EE +FE + +RN++SW + I GF ++G
Sbjct: 238 AHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISWTASINGFYQHG--- 294
Query: 284 ESFDLLIKM--MGCEEGFIPDVITVVTVL 310
F +K M E G P+ T VL
Sbjct: 295 -DFKKALKQFSMMRESGIEPNEFTFSIVL 322
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 72/264 (27%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L CG I+ GK++H V Q+ ++ + L+T+YS CG ++ VF++L
Sbjct: 219 TMLAVCGTISAIQEGKQLHAHV-VKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQ 277
Query: 162 RNLFQWNALVSGFTKNELYTDVL------------------------------------- 184
RN+ W A ++GF ++ + L
Sbjct: 278 RNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCDLGKWMKQRT 337
Query: 185 -----------SIFV------ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAA 227
SIF+ E + T L+P+ F P ++KACG ++D G +H +
Sbjct: 338 SSNRWGGQHLMSIFLLRKMIEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVIL 397
Query: 228 KMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFD 287
K D ++ +ALI MY KC VE+ ++F+ +P N+VSWN++I GFS+
Sbjct: 398 KNSFESDAYIISALIYMYSKCGHVEKACRVFDWIP--NVVSWNTLIAGFSQ--------- 446
Query: 288 LLIKMMGCEEGFIPDVITVVTVLP 311
M+ ++GF P +T+ ++LP
Sbjct: 447 ----ML--DQGFCPSSVTISSLLP 464
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 6/181 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + ++ GK +H + D + + L+ MY+ CG+ +++ +F + R
Sbjct: 462 LLPACTNVANLRHGKEIHGY-AMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPER 520
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELS-SDTELKPDNFTFPCVIKACGGIADVGFGSG 221
N WN+L+ G+ + + + +F ++ SDT+L D+ TF V+ AC V G
Sbjct: 521 NTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKL--DHLTFTAVLNACSHAGMVELGES 578
Query: 222 V-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSEN 279
+ M K + + ++ + G+ + E L + MP E + W +++ +
Sbjct: 579 LFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNH 638
Query: 280 G 280
G
Sbjct: 639 G 639
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 121/245 (49%), Gaps = 40/245 (16%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC G++VH + + +D ++N L+ MY+ CG ++R +FDS+ +R
Sbjct: 258 VMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSR 317
Query: 163 -------------------------------NLFQWNALVSGFTKNELYTDVLSIFVELS 191
N+ WN L++ + +N + + +FV+L
Sbjct: 318 SIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLK 377
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVH------GMAAKMGLIGDVFVSNALIAMY 245
D+ + P ++T+ V+ ACG IAD+ G H G G DVFV N+L+ MY
Sbjct: 378 RDS-IWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMY 436
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
K +++ K+FE M R+ VSWN++I G+++NG + ++ L +M+ E PD +T
Sbjct: 437 LKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNEN--PDSVT 494
Query: 306 VVTVL 310
++ VL
Sbjct: 495 MIGVL 499
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 102/178 (57%), Gaps = 3/178 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC EKD G++VH LV+ S ++D I + L+ MY+ C P D+RRVFD++ RN
Sbjct: 158 LSACAAEKDSRTGEQVHGLVARSPH-ADDVHIRSALVDMYAKCERPEDARRVFDAMPERN 216
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN+L++ + +N + L +FVE+ + PD T V+ AC G+A G VH
Sbjct: 217 VVSWNSLITCYEQNGPVGEALMLFVEMMA-AGFSPDEVTLSSVMSACAGLAADREGRQVH 275
Query: 224 GMAAKMG-LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
K L D+ ++NAL+ MY KC E +F+ MP R++VS SI+ G++++
Sbjct: 276 AHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSA 333
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 108/228 (47%), Gaps = 37/228 (16%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
+ H + S F++NT L++ Y+ G D+RRVFD + RN F +NAL+S +
Sbjct: 36 ARAAHARILKSPVAGETFLLNT-LVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYA 94
Query: 176 K-------NELY--------------------------TDVLSIFVELSSDTELKPDNFT 202
+ L+ D L + +D + + ++
Sbjct: 95 RLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHAD-DFVLNAYS 153
Query: 203 FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
F + AC D G VHG+ A+ DV + +AL+ MY KC E+ ++F+ MP
Sbjct: 154 FASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMP 213
Query: 263 ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
ERN+VSWNS+I + +NG E+ L ++MM GF PD +T+ +V+
Sbjct: 214 ERNVVSWNSLITCYEQNGPVGEALMLFVEMMAA--GFSPDEVTLSSVM 259
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 117/208 (56%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC + D+ +G ++H L+ + +D + T L+++Y C D+ +VFD + +
Sbjct: 120 VLKACARKLDVRLGLKIHSLL-VKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDK 178
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A+++G+ + + + + F +L + LKPD+F+ V+ AC + D G +
Sbjct: 179 NVVSWTAIITGYISSGHFREAIGAFKKLL-EMGLKPDSFSLVKVLAACARLGDCTSGEWI 237
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ G+ +VFV+ +L+ MY KC +E +F MPE+++VSW+++I G++ NG
Sbjct: 238 DRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLP 297
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ DL +M E PD T+V VL
Sbjct: 298 QQALDLFFQMQ--SENLKPDCYTMVGVL 323
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 90/159 (56%), Gaps = 3/159 (1%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
S+ VF +K N+F WN ++ G + + D + ++ + L P+NFT P V+KAC
Sbjct: 67 SKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFL-PNNFTIPFVLKACA 125
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
DV G +H + K G DVFV +L+++Y KC ++ +K+F+ +P++N+VSW +
Sbjct: 126 RKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTA 185
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
II G+ +G E+ K++ E G PD ++V VL
Sbjct: 186 IITGYISSGHFREAIGAFKKLL--EMGLKPDSFSLVKVL 222
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC D G+ + +S S N F+ T L+ MY CG + +F ++ +
Sbjct: 221 VLAACARLGDCTSGEWIDRYISDSGMGRNVFVA-TSLLDMYVKCGNLERANLIFSAMPEK 279
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+ ++ G+ N L L +F ++ S+ LKPD +T V+ AC + + G
Sbjct: 280 DIVSWSTMIQGYAFNGLPQQALDLFFQMQSEN-LKPDCYTMVGVLSACATLGALDLGIWA 338
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ + + + + ALI MY KC V + ++F M +++ V WN+++ G S NG +
Sbjct: 339 SSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHA 398
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
F L + + G PD T + +L
Sbjct: 399 KAVFSLF--SLVEKHGIRPDENTFIGLL 424
>gi|449442080|ref|XP_004138810.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Cucumis sativus]
gi|449490224|ref|XP_004158542.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Cucumis sativus]
Length = 619
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 124/243 (51%), Gaps = 6/243 (2%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSAST 127
+ T C + +A+S+ L + L V +L+ACG E++++IG+++H L+
Sbjct: 259 MITSCSQQGLGREAISMFSNMLSDEFLPNEFSVCSVLKACGEERELKIGRQLHGLIIKKI 318
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
ND + T L+ MY+ CG DSR VFD ++ RN W ++++G+ + L + L++F
Sbjct: 319 -IKNDVFVGTSLVDMYAKCGNLADSREVFDGMRNRNTVTWTSIIAGYAREGLGEEALNLF 377
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
L + +N T +++ACG I G VH K ++ + + L+ Y K
Sbjct: 378 -RLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQIVKNSFQTNIHIGSTLVWFYCK 436
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
C + + ++MP R++VSW +II G + G E+ + L M+ EEG P+ T
Sbjct: 437 CRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEALEFLKNMI--EEGVEPNSFTYS 494
Query: 308 TVL 310
+ L
Sbjct: 495 STL 497
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 4/207 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG + G+ VH + F + I + L+ Y C L + V + R
Sbjct: 395 ILRACGSIEASLTGREVHAQI-VKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLR 453
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W A++SG ++ L F++ + ++P++FT+ +KAC + V G +
Sbjct: 454 DVVSWTAIISGCAHLGHESEALE-FLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGKMI 512
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K + +VFV +ALI MY KC +V E ++F+ MP RNLVSW ++I ++ NG
Sbjct: 513 HSSANKTSALSNVFVGSALIYMYAKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLC 572
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTV 309
E+ L+ +M EGF D + TV
Sbjct: 573 REALKLMYRMQA--EGFEVDDYILGTV 597
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 124/232 (53%), Gaps = 9/232 (3%)
Query: 82 KALSLLQENLHNADLKEATG--VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
+AL+L +++ + L +L C D E+G+++H ++ + + I+++ +
Sbjct: 171 EALALFSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNR--GNLIVDSAI 228
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
I Y+ C + F+ ++ R++ W ++++ ++ L + +S+F + SD E P+
Sbjct: 229 IYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSD-EFLPN 287
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
F+ V+KACG ++ G +HG+ K + DVFV +L+ MY KC + + ++F+
Sbjct: 288 EFSVCSVLKACGEERELKIGRQLHGLIIKKIIKNDVFVGTSLVDMYAKCGNLADSREVFD 347
Query: 260 VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIP-DVITVVTVL 310
M RN V+W SII G++ G E+ +L M + IP + +T+V++L
Sbjct: 348 GMRNRNTVTWTSIIAGYAREGLGEEALNLFRLM---KRQRIPANNLTIVSIL 396
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 4/176 (2%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ L++ Y G +D+R+VFD + R++ W A+++G+ +L + L++F + S +
Sbjct: 124 VGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALALFSD-SVKS 182
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+ + F C++ C D G +HG+ K G G++ V +A+I Y +C +
Sbjct: 183 GVLANGQMFVCILNLCAKRLDFELGRQIHGVIVK-GNRGNLIVDSAIIYFYAQCKDISSA 241
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
FE M R++V W S+I S+ G E+ + M+ E F+P+ +V +VL
Sbjct: 242 FVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDE--FLPNEFSVCSVL 295
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 117/208 (56%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG+ D G++V+ S + + N+ LI+MY+ G D+R+ FD L +
Sbjct: 162 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNS-LISMYARSGRMEDARKAFDILFEK 220
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL +NA+V G+ KN + +F E++ DT + FTF ++ I +G G +
Sbjct: 221 NLVSYNAIVDGYAKNLKSEEAFLLFNEIA-DTGIGISAFTFASLLSGAASIGAMGKGEQI 279
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K G + + NALI+MY +C +E ++F M +RN++SW S+I GF+++GF+
Sbjct: 280 HGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFA 339
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ KM+ E G P+ IT V VL
Sbjct: 340 TRALEMFHKML--ETGTKPNEITYVAVL 365
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 111/191 (58%), Gaps = 6/191 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC---GFPLDSRRVFDSL 159
+L AC + +GK++H V + D + L+ MY+ C G DSR+VF+ +
Sbjct: 57 VLSACTELGLLALGKQLHSRV-IRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM 115
Query: 160 KTRNLFQWNALVSGFTKN-ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
N+ W A+++ + ++ E + + +F ++ S ++P++F+F V+KACG ++D
Sbjct: 116 PEHNVMSWTAIITAYAQSGECDKEAIELFCKMISG-HIRPNHFSFSSVLKACGNLSDPYT 174
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G V+ A K+G+ V N+LI+MY + +E+ K F+++ E+NLVS+N+I+ G+++
Sbjct: 175 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 234
Query: 279 NGFSCESFDLL 289
N S E+F L
Sbjct: 235 NLKSEEAFLLF 245
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 82/145 (56%), Gaps = 7/145 (4%)
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
+VFD + RNL W +++ F + D + +F+++ + PD FT+ V+ AC +
Sbjct: 6 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYV-PDRFTYSSVLSACTEL 64
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF---VEEMVKLFEVMPERNLVSWN 270
+ G +H ++GL DV V +L+ MY KCA V++ K+FE MPE N++SW
Sbjct: 65 GLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWT 124
Query: 271 SIICGFSENGFSC--ESFDLLIKMM 293
+II ++++G C E+ +L KM+
Sbjct: 125 AIITAYAQSG-ECDKEAIELFCKMI 148
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 75/148 (50%), Gaps = 3/148 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+++H + SN I N LI+MYS CG + +VF+ ++ RN+ W ++++GF
Sbjct: 276 GEQIHGRLLKGGYKSNQCICNA-LISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 334
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG-VHGMAAKMGLIGD 234
K+ T L +F ++ +T KP+ T+ V+ AC + + G + M + G++
Sbjct: 335 KHGFATRALEMFHKML-ETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR 393
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ ++ + G+ + E ++ MP
Sbjct: 394 MEHYACMVDLLGRSGLLVEAMEFINSMP 421
>gi|359481497|ref|XP_002273989.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g37320-like [Vitis vinifera]
Length = 510
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 131/239 (54%), Gaps = 8/239 (3%)
Query: 76 ESKSLNKALSLLQENLHNAD--LKEATGV--LLQACGHEKDIEIGKRVHELVSASTQFSN 131
S SL + ++L+ N N + + +A+ + L C + ++ G + H L + T F
Sbjct: 88 HSNSLEETSNMLETNFLNEEESIVDASALSHALSLCASSRSLKSGVQFHCL-AIRTGFVG 146
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ + + LI+ YS CG + RVF+ + +N+ W A+++GF + L L ++ +
Sbjct: 147 NVYVGSCLISFYSKCGELCHAYRVFEEMPVKNVVSWTAIIAGFAQEWLVDGCLELYSRMR 206
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ T LKP++ TF C++ C G +G G H +MG V V+NALI+MY KC V
Sbjct: 207 NST-LKPNDLTFTCLLSTCTGGGSLGRGRSAHCQTIEMGFDSYVHVANALISMYCKCGNV 265
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +FE M +++VSWNS+I G +++G + ++ DL +M ++ PD IT + VL
Sbjct: 266 EDAYYIFERMDGKDIVSWNSMIAGHAQHGLAVQAIDLFEEMK--KQKLKPDAITFLGVL 322
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F + + LI+MY CG D+ +F+ + +++ WN++++G ++ L + +F
Sbjct: 245 FDSYVHVANALISMYCKCGNVEDAYYIFERMDGKDIVSWNSMIAGHAQHGLAVQAIDLFE 304
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
E+ +LKPD TF V+ +C + V G + G+ ++ ++ + G+
Sbjct: 305 EMKKQ-KLKPDAITFLGVLSSCRHVGLVKQGQFYFNSMVEHGVKPELDHFACVVDLLGRA 363
Query: 249 AFVEEMVKLFEVMP-ERNLVSWNSII 273
+EE MP N + W S++
Sbjct: 364 GLLEEARDFIVKMPIHPNAIIWGSLL 389
>gi|224113417|ref|XP_002316490.1| predicted protein [Populus trichocarpa]
gi|222865530|gb|EEF02661.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 128/236 (54%), Gaps = 6/236 (2%)
Query: 75 EESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFI 134
EE K+++ L + +E ++ ++ V AC + D+ +++H + D
Sbjct: 79 EEEKAIDIFLEMQREGSPCSEFTVSSVVC--ACAAKGDVFFCRQLHAFAIKAV-VDADVF 135
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ T LI +Y+ CG D+ VF+ + RN W+++V+GF +NELY + L +F +
Sbjct: 136 VGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNELYEEGLVLFAR-GKEM 194
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
L+ + F VI+AC G+A + G VH + + G + FV++AL+ MY KC +EE
Sbjct: 195 GLENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNNFVASALVDMYAKCGSIEEA 254
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
LF + ++N+V WN+II GF+++ S E +L +M + G PD +T V VL
Sbjct: 255 YVLFCNIEKKNVVLWNAIISGFAKHACSSEVMNLFEEMQ--QTGMQPDEVTYVAVL 308
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 96/197 (48%), Gaps = 6/197 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ C ++ GK H V D + + L+ MYS CG + +VFD + R
Sbjct: 4 LLQFCAKNREPITGKACHGQV-IRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIPER 62
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP-DNFTFPCVIKACGGIADVGFGSG 221
++ WN ++ +N + IF+E+ E P FT V+ AC DV F
Sbjct: 63 SMVSWNIMIGTCVQNGEEEKAIDIFLEMQR--EGSPCSEFTVSSVVCACAAKGDVFFCRQ 120
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H A K + DVFV ALI +Y KC +E+ +FE MPERN V+W+SI+ GF +N
Sbjct: 121 LHAFAIKAVVDADVFVGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNEL 180
Query: 282 SCESFDLLI--KMMGCE 296
E L K MG E
Sbjct: 181 YEEGLVLFARGKEMGLE 197
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 91/173 (52%), Gaps = 4/173 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC + G++VH +V + N+F+ + L+ MY+ CG ++ +F +++ +
Sbjct: 206 VIRACAGLAALIEGRQVHAIVCRTGFGPNNFVASA-LVDMYAKCGSIEEAYVLFCNIEKK 264
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WNA++SGF K+ ++V+++F E+ T ++PD T+ V+ AC + V G
Sbjct: 265 NVVLWNAIISGFAKHACSSEVMNLFEEMQQ-TGMQPDEVTYVAVLSACVHVGLVDKGRSY 323
Query: 223 HG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS-WNSII 273
M + + +V + ++ + G+ V E +L MP S W S++
Sbjct: 324 FDLMTREHNVSPNVLHYSCMVDILGRGGLVHEAHELMTKMPFAATASMWGSLL 376
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 117/208 (56%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG+ D G++V+ S + + N+ LI+MY+ G D+R+ FD L +
Sbjct: 167 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNS-LISMYARSGRMEDARKAFDILFEK 225
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL +NA+V G+ KN + +F E++ DT + FTF ++ I +G G +
Sbjct: 226 NLVSYNAIVDGYAKNLKSEEAFLLFNEIA-DTGIGISAFTFASLLSGAASIGAMGKGEQI 284
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K G + + NALI+MY +C +E ++F M +RN++SW S+I GF+++GF+
Sbjct: 285 HGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFA 344
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ KM+ E G P+ IT V VL
Sbjct: 345 TRALEMFHKML--ETGTKPNEITYVAVL 370
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 111/191 (58%), Gaps = 6/191 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC---GFPLDSRRVFDSL 159
+L AC + +GK++H V + D + L+ MY+ C G DSR+VF+ +
Sbjct: 62 VLSACTELGLLALGKQLHSRV-IRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM 120
Query: 160 KTRNLFQWNALVSGFTKN-ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
N+ W A+++ + ++ E + + +F ++ S ++P++F+F V+KACG ++D
Sbjct: 121 PEHNVMSWTAIITAYAQSGECDKEAIELFCKMISG-HIRPNHFSFSSVLKACGNLSDPYT 179
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G V+ A K+G+ V N+LI+MY + +E+ K F+++ E+NLVS+N+I+ G+++
Sbjct: 180 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 239
Query: 279 NGFSCESFDLL 289
N S E+F L
Sbjct: 240 NLKSEEAFLLF 250
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 82/145 (56%), Gaps = 7/145 (4%)
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
+VFD + RNL W +++ F + D + +F+++ + PD FT+ V+ AC +
Sbjct: 11 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYV-PDRFTYSSVLSACTEL 69
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF---VEEMVKLFEVMPERNLVSWN 270
+ G +H ++GL DV V +L+ MY KCA V++ K+FE MPE N++SW
Sbjct: 70 GLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWT 129
Query: 271 SIICGFSENGFSC--ESFDLLIKMM 293
+II ++++G C E+ +L KM+
Sbjct: 130 AIITAYAQSG-ECDKEAIELFCKMI 153
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 75/148 (50%), Gaps = 3/148 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+++H + SN I N LI+MYS CG + +VF+ ++ RN+ W ++++GF
Sbjct: 281 GEQIHGRLLKGGYKSNQCICNA-LISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 339
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG-VHGMAAKMGLIGD 234
K+ T L +F ++ +T KP+ T+ V+ AC + + G + M + G++
Sbjct: 340 KHGFATRALEMFHKML-ETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR 398
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ ++ + G+ + E ++ MP
Sbjct: 399 MEHYACMVDLLGRSGLLVEAMEFINSMP 426
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 118/208 (56%), Gaps = 6/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + D+E G+ VH L+ + D + LI+MYS C + VF +LK +
Sbjct: 351 LHACANLGDLERGRYVHRLLD-EKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKT 409
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WNA++ G+ +N + L++F E+ S ++KPD+FT VI A ++ +H
Sbjct: 410 VVTWNAMILGYAQNGCVNEALNLFCEMQSH-DIKPDSFTLVSVITALADLSVTRQAKWIH 468
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G+A + + +VFV ALI + KC ++ KLF++M ER++++WN++I G+ NG
Sbjct: 469 GLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGR 528
Query: 284 ESFDLLIKMMGCEEGFI-PDVITVVTVL 310
E+ DL +M + G + P+ IT ++V+
Sbjct: 529 EALDLFNEM---QNGSVKPNEITFLSVI 553
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 120/217 (55%), Gaps = 11/217 (5%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVS--ASTQFSNDFIINTRLITMYSLCGFPLDSRR 154
+ + +LL+ C K++ H+++ F N+ + T+LI+++ ++ R
Sbjct: 44 RHPSAILLELCTSLKEL------HQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAAR 97
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VF+ ++ + ++ ++ G+ KN D + + + D E+ P + F +++ G
Sbjct: 98 VFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCD-EVMPVVYDFTYLLQLSGENL 156
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
D+ G +HGM G ++F A++ +Y KC +E+ K+FE MP+R+LVSWN+++
Sbjct: 157 DLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVA 216
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G+++NGF+ + ++++M E G PD IT+V+VLP
Sbjct: 217 GYAQNGFARRAVQVVLQMQ--EAGQKPDSITLVSVLP 251
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ G D+ G+ +H +V + F ++ T ++ +Y+ C D+ ++F+ + R
Sbjct: 148 LLQLSGENLDLRRGREIHGMV-ITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQR 206
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN +V+G+ +N + + +++ + KPD+ T V+ A + + G +
Sbjct: 207 DLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQ-KPDSITLVSVLPAVADLKALRIGRSI 265
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A + G V V+ A++ Y KC V +F+ M RN+VSWN++I G+++NG S
Sbjct: 266 HGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGES 325
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F +KM+ +EG P ++++ L
Sbjct: 326 EEAFATFLKML--DEGVEPTNVSMMGAL 351
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 111/210 (52%), Gaps = 8/210 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN--TRLITMYSLCGFPLDSRRVFDSLK 160
+L A K + IG+ +H + + ++++N T ++ Y CG +R VF +
Sbjct: 249 VLPAVADLKALRIGRSIH---GYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMS 305
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+RN+ WN ++ G+ +N + + F+++ D ++P N + + AC + D+ G
Sbjct: 306 SRNVVSWNTMIDGYAQNGESEEAFATFLKML-DEGVEPTNVSMMGALHACANLGDLERGR 364
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH + + + DV V N+LI+MY KC V+ +F + + +V+WN++I G+++NG
Sbjct: 365 YVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNG 424
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L +M + PD T+V+V+
Sbjct: 425 CVNEALNLFCEMQSHD--IKPDSFTLVSVI 452
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 9/188 (4%)
Query: 80 LNKALSLLQENLHNADLKEATGVLLQACGHEKDIEI---GKRVHELVSASTQFSNDFIIN 136
+N+AL+L E + + D+K + L+ D+ + K +H L + N F+
Sbjct: 426 VNEALNLFCE-MQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVC- 483
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
T LI ++ CG +R++FD ++ R++ WNA++ G+ N + L +F E+ + + +
Sbjct: 484 TALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGS-V 542
Query: 197 KPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
KP+ TF VI AC G+ + G M GL + A++ + G+ +++
Sbjct: 543 KPNEITFLSVIAACSHSGLVEEGM-YYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDA 601
Query: 255 VKLFEVMP 262
K + MP
Sbjct: 602 WKFIQDMP 609
>gi|255547019|ref|XP_002514567.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546171|gb|EEF47673.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 515
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 115/210 (54%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L ACG + GK+VH + S N F+ + L+ MY C + VF +K
Sbjct: 277 GSVLTACGGLTALREGKQVHAFIIRSDCTDNVFV-GSALVDMYCKCKILRYAEAVFKRMK 335
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+N+ W A++ G+ +N + + +F ++ + ++PD+FT VI +C +A + G+
Sbjct: 336 YKNVVSWTAILVGYGQNGFSEEAVKVFCDMQRNG-IEPDDFTLGSVISSCANLASLEEGA 394
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H A GLI + VSNAL+ +YGKC +E+ +LF M R+ VSW ++I G+++ G
Sbjct: 395 QFHCRALVSGLISSITVSNALVTLYGKCGSIEDSDRLFNEMNFRDEVSWTALISGYAQFG 454
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ +L +M+ G PD +T + VL
Sbjct: 455 KARETIELFERMLA--HGLKPDAVTFIGVL 482
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 94/179 (52%), Gaps = 3/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ +++ +IT G DS+R+F +K R+ W +++G +N L + + F ++
Sbjct: 206 NVVMHNTMITGLLKFGMMEDSKRLFHGMKERDNISWTTMITGLVQNGLEEEAIDFFRQMR 265
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
D + D +TF V+ ACGG+ + G VH + +VFV +AL+ MY KC +
Sbjct: 266 LDG-IGMDQYTFGSVLTACGGLTALREGKQVHAFIIRSDCTDNVFVGSALVDMYCKCKIL 324
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ M +N+VSW +I+ G+ +NGFS E+ + M G PD T+ +V+
Sbjct: 325 RYAEAVFKRMKYKNVVSWTAILVGYGQNGFSEEAVKVFCDMQ--RNGIEPDDFTLGSVI 381
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 1/162 (0%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
N F NT +++ YS G + +F + R+ WN ++SG+ +D + + +
Sbjct: 73 NSFSWNT-ILSAYSKSGHLPKMKEIFSLMPNRDGVSWNTILSGYASYGSVSDAVKAYNSM 131
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
D + TF ++ V G +HG K G G VFV + L+ MY K
Sbjct: 132 MRDGVFNLNRITFSTMLILASSRELVDLGRQIHGHIMKFGFGGYVFVGSPLVDMYAKTGL 191
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
V E K+F+ MP+RN+V N++I G + G +S L M
Sbjct: 192 VYEAKKVFDEMPDRNVVMHNTMITGLLKFGMMEDSKRLFHGM 233
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G ++ +C + +E G + H S S+ ++ L+T+Y CG DS R+F+ +
Sbjct: 378 GSVISSCANLASLEEGAQFHCRALVSGLISS-ITVSNALVTLYGKCGSIEDSDRLFNEMN 436
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
R+ W AL+SG+ + + + +F + + LKPD TF V+ AC
Sbjct: 437 FRDEVSWTALISGYAQFGKARETIELFERMLAHG-LKPDAVTFIGVLLAC 485
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 198 PDNFTFPCVIKACGGIADVGFGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
P+ F + ++ A G + ++ + + GM + + F N +++ Y K + +M +
Sbjct: 41 PEPFLYNNLMNAYGKLGNIAYARHLFDGMPQR-----NSFSWNTILSAYSKSGHLPKMKE 95
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
+F +MP R+ VSWN+I+ G++ G ++ MM
Sbjct: 96 IFSLMPNRDGVSWNTILSGYASYGSVSDAVKAYNSMM 132
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 117/208 (56%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC + D+ +G ++H L+ + +D + T L+++Y C D+ +VFD + +
Sbjct: 120 VLKACARKLDVRLGLKIHSLL-VKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDK 178
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A+++G+ + + + + F +L + LKPD+F+ V+ AC + D G +
Sbjct: 179 NVVSWTAIITGYISSGHFREAIGAFKKLL-EMGLKPDSFSLVKVLAACARLGDCTSGEWI 237
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ G+ +VFV+ +L+ MY KC +E +F MPE+++VSW+++I G++ NG
Sbjct: 238 DRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLP 297
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ DL +M E PD T+V VL
Sbjct: 298 QQALDLFFQMQ--SENLKPDCYTMVGVL 323
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 90/159 (56%), Gaps = 3/159 (1%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
S+ VF +K N+F WN ++ G + + D + ++ + L P+NFT P V+KAC
Sbjct: 67 SKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFL-PNNFTIPFVLKACA 125
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
DV G +H + K G DVFV +L+++Y KC ++ +K+F+ +P++N+VSW +
Sbjct: 126 RKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTA 185
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
II G+ +G E+ K++ E G PD ++V VL
Sbjct: 186 IITGYISSGHFREAIGAFKKLL--EMGLKPDSFSLVKVL 222
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC D G+ + +S S N F+ T L+ MY CG + +F ++ +
Sbjct: 221 VLAACARLGDCTSGEWIDRYISDSGMGRNVFVA-TSLLDMYVKCGNLERANLIFSAMPEK 279
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+ ++ G+ N L L +F ++ S+ LKPD +T V+ AC + + G
Sbjct: 280 DIVSWSTMIQGYAFNGLPQQALDLFFQMQSEN-LKPDCYTMVGVLSACATLGALDLGIWA 338
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ + + + + ALI MY KC V + ++F M ++ V WN+++ G S NG +
Sbjct: 339 SSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHA 398
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
F L + + G PD T + +L
Sbjct: 399 KAVFSLFSLVE--KHGIRPDENTFIGLL 424
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 114/208 (54%), Gaps = 7/208 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ H++ ++ ++H + S N F++ T+L+ S G +R++FD
Sbjct: 62 LIDNSTHKRHLD---QIHNRLVISGLQHNGFLM-TKLVNGSSNLGQICYARKLFDEFCYP 117
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++F WNA++ +++N +Y D + ++ + T + PD FTFP V+KAC + D G +
Sbjct: 118 DVFMWNAIIRSYSRNNMYRDTVEMYRWMRW-TGVHPDGFTFPYVLKACTELLDFGLSCII 176
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K G DVFV N L+A+Y KC + +F+ + R +VSW SII G+++NG +
Sbjct: 177 HGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKA 236
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + +M G PD I +V++L
Sbjct: 237 VEALRMFSQMR--NNGVKPDWIALVSIL 262
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 103/204 (50%), Gaps = 4/204 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC D + +H + F +D + L+ +Y+ CG ++ VFD L R
Sbjct: 160 VLKACTELLDFGLSCIIHGQI-IKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHR 218
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W +++SG+ +N + L +F ++ ++ +KPD +++A + D+ G +
Sbjct: 219 TIVSWTSIISGYAQNGKAVEALRMFSQMRNNG-VKPDWIALVSILRAYTDVDDLEQGRSI 277
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG KMGL + + +L A Y KC V F+ M N++ WN++I G+++NG +
Sbjct: 278 HGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHA 337
Query: 283 CESFDLLIKMMGCEEGFIPDVITV 306
E+ +L M+ PD +TV
Sbjct: 338 EEAVNLFHYMI--SRNIKPDSVTV 359
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+A D+E G+ +H V ++ + L Y+ CG ++ FD +KT
Sbjct: 261 ILRAYTDVDDLEQGRSIHGFV-IKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTT 319
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WNA++SG+ KN + +++F + S +KPD+ T + A + + +
Sbjct: 320 NVIMWNAMISGYAKNGHAEEAVNLFHYMIS-RNIKPDSVTVRSAVLASAQVGSLELAQWM 378
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+K D+FV+ +LI MY KC VE ++F+ ++++V W+++I G+ +G
Sbjct: 379 DDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQG 438
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L M + G P+ +T + +L
Sbjct: 439 WEAINLYHVMK--QAGVFPNDVTFIGLL 464
>gi|255540005|ref|XP_002511067.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550182|gb|EEF51669.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 318
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 127/239 (53%), Gaps = 7/239 (2%)
Query: 74 CEESKSLNKALS-LLQENLHNADLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSN 131
CE + K LL +N D E T V L ACG + +GK++H L+ + F
Sbjct: 22 CERNGDALKVFGELLNDNFVRFD--EVTLVNALTACGRTGFVNLGKKIHALIVVNG-FVL 78
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I+ + LI MY+ C ++R VFD + RNL W +L+ G+ + +Y + L +F EL
Sbjct: 79 DVILGSCLIDMYAKCAQMDNAREVFDKIPVRNLVCWTSLIVGYARLNMYKEGLELFRELQ 138
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ D CV+ ACG + + G VH + G+ ++ V NALI MY KC +
Sbjct: 139 I-AGVIADAALVACVVSACGHMGALAQGRWVHTYCERNGIDMNLSVRNALIDMYSKCGDI 197
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ ++F M +++L SW ++I GF+ NG+S E+ +L ++ C + P+ +T + VL
Sbjct: 198 EKAHQIFNGMVKKDLFSWTAMISGFAMNGYSDEALELFAQVETCND-VKPNEVTFLGVL 255
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 2/149 (1%)
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ WN+++SG+ + E D L +F EL +D ++ D T + ACG V G
Sbjct: 7 RDVVSWNSMISGYLQCERNGDALKVFGELLNDNFVRFDEVTLVNALTACGRTGFVNLGKK 66
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H + G + DV + + LI MY KCA ++ ++F+ +P RNLV W S+I G++
Sbjct: 67 IHALIVVNGFVLDVILGSCLIDMYAKCAQMDNAREVFDKIPVRNLVCWTSLIVGYARLNM 126
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E +L ++ G I D V V+
Sbjct: 127 YKEGLELFRELQ--IAGVIADAALVACVV 153
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ ACGH + G+ VH + + + LI MYS CG + ++F+ + +
Sbjct: 152 VVSACGHMGALAQGRWVHTYCERNG-IDMNLSVRNALIDMYSKCGDIEKAHQIFNGMVKK 210
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGF 218
+LF W A++SGF N + L +F ++ + ++KP+ TF V+ AC GG D GF
Sbjct: 211 DLFSWTAMISGFAMNGYSDEALELFAQVETCNDVKPNEVTFLGVLSACSHGGFVDKGF 268
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 112/197 (56%), Gaps = 8/197 (4%)
Query: 117 KRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
K++H L+ QFS F+I T+LI S G +R+VFD L +F WNA++ G++
Sbjct: 38 KQIHARLLVLGLQFSG-FLI-TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+N + D L ++ + + PD+FTFP ++KAC G++ + G VH ++G DV
Sbjct: 96 RNNHFQDALLMYSNMQL-ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 236 FVSNALIAMYGKCAFVEEMVKLFE--VMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
FV N LIA+Y KC + +FE +PER +VSW +I+ +++NG E+ ++ M
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMR 214
Query: 294 GCEEGFIPDVITVVTVL 310
+ PD + +V+VL
Sbjct: 215 KMD--VKPDWVALVSVL 229
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 108/201 (53%), Gaps = 6/201 (2%)
Query: 111 KDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNA 169
+D++ G+ +H +V + D +I+ L TMY+ CG ++ +FD +K+ NL WNA
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLIS--LNTMYAKCGQVATAKILFDKMKSPNLILWNA 293
Query: 170 LVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM 229
++SG+ KN + + +F E+ + +++PD + I AC + + ++ +
Sbjct: 294 MISGYAKNGYAREAIDMFHEMI-NKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS 352
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL 289
DVF+S+ALI M+ KC VE +F+ +R++V W+++I G+ +G + E+ L
Sbjct: 353 DYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLY 412
Query: 290 IKMMGCEEGFIPDVITVVTVL 310
M G P+ +T + +L
Sbjct: 413 RAME--RGGVHPNDVTFLGLL 431
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-- 160
LL+AC +++G+ VH V F D + LI +Y+ C +R VF+ L
Sbjct: 125 LLKACSGLSHLQMGRFVHAQV-FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLP 183
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R + W A+VS + +N + L IF + ++KPD V+ A + D+ G
Sbjct: 184 ERTIVSWTAIVSAYAQNGEPMEALEIFSHMRK-MDVKPDWVALVSVLNAFTCLQDLKQGR 242
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H KMGL + + +L MY KC V LF+ M NL+ WN++I G+++NG
Sbjct: 243 SIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ E+ D+ +M+ + PD I++ + +
Sbjct: 303 YAREAIDMFHEMI--NKDVRPDTISITSAI 330
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC H D E + + + + + ++ NT LI MY G +R++FD++ R
Sbjct: 131 IILACSHLGDWEFADSMVKYIKENNLEIDVYLGNT-LIDMYGRLGNLTAARKLFDNMPKR 189
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W ++++G+++ ++D + +F E+ + ++KPD T V+ AC + + G V
Sbjct: 190 DVISWTSMITGYSQASQFSDAVKLFQEMMA-AKVKPDKVTVASVLSACAHLGKLDVGWAV 248
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G+ D++V N+LI MY KC VE+ +++F M +++ VSW S+I G + NGF+
Sbjct: 249 HHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFA 308
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ DL +M+ EG P T V +L
Sbjct: 309 NSALDLFSQML--REGVQPTHGTFVGIL 334
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 100/182 (54%), Gaps = 3/182 (1%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F + ++ LI MY++CG ++++FD + R+L WN L+ G+++ Y +VL +F
Sbjct: 55 FESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFD 114
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
+++ +K D T +I AC + D F + + L DV++ N LI MYG+
Sbjct: 115 AMTA-ANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRL 173
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
+ KLF+ MP+R+++SW S+I G+S+ ++ L +MM + PD +TV +
Sbjct: 174 GNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAK--VKPDKVTVAS 231
Query: 309 VL 310
VL
Sbjct: 232 VL 233
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
S +H A K+G +FVSNALI MY C + K+F+ M +R+LVSWN++ICG+S+
Sbjct: 44 SSIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQY 103
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E L M D +T+V ++
Sbjct: 104 NKYKEVLRLFDAMTAAN--IKADAVTMVKII 132
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 88/214 (41%), Gaps = 16/214 (7%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
++ + A+ L QE + + V +L AC H +++G VH + D
Sbjct: 203 QASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHG-VQADI 261
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
+ LI MY CG + VF +K ++ W +++SG N L +F ++ +
Sbjct: 262 YVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLRE 321
Query: 194 TELKPDNFTFPCVIKACGGIADVGFG-------SGVHGMAAKMGLIGDVFVSNALIAMYG 246
++P + TF ++ AC V G VHG+ M G V L++ G
Sbjct: 322 G-VQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVV---DLLSRSG 377
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
E +K ++P+ +V W ++ +G
Sbjct: 378 NIDKAYEFIKKMPIVPD--VVVWRILLSACKLHG 409
>gi|168032055|ref|XP_001768535.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680248|gb|EDQ66686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C H KD+ GK VH ++ S F++N L+ MY CG +D+R+VFD + R
Sbjct: 55 LLRRCTHMKDLAEGKYVHAHMAKSDFVPTTFVLNA-LVNMYMKCGSLVDARQVFDRMVER 113
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++F + +++G+ K D ++ ++ + + D TF ++ C + + G V
Sbjct: 114 DMFTYTMMLTGYAKLGYPEDAYKMYEQMQKE-RVPVDRITFTTILNVCSTLRSLEKGMKV 172
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G+ D+ + N LI MY KC +++ ++F+ M R++V+WN ++ G + NG+
Sbjct: 173 HQDMVRGGIRPDIILGNTLIDMYAKCGNLKQAHRVFKEMDNRDIVTWNIMVGGAARNGYF 232
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F+ M+ +EG PD +T +++L
Sbjct: 233 DEAFEFFKAML--DEGQKPDKVTYISIL 258
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 9/209 (4%)
Query: 103 LLQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L C + +E G +VH+ +V + D I+ LI MY+ CG + RVF +
Sbjct: 156 ILNVCSTLRSLEKGMKVHQDMVRGGIR--PDIILGNTLIDMYAKCGNLKQAHRVFKEMDN 213
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ WN +V G +N + + F + + + KPD T+ ++ AC + G+
Sbjct: 214 RDIVTWNIMVGGAARNGYFDEAFEFFKAMLDEGQ-KPDKVTYISILNACTSLEQ---GTL 269
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H + K G DV V AL+ M+ KC V + +K+F+ +P+RN+VSW S+I +++ G
Sbjct: 270 LHSVIMKAGFELDVRVGTALVNMFSKCGSVVDALKVFQKLPQRNVVSWTSVISAYAQAGE 329
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + KM+ EG + D T+L
Sbjct: 330 PERALECYAKML--NEGMVADKRAYTTIL 356
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 106/208 (50%), Gaps = 7/208 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E G +H ++ + F D + T L+ M+S CG +D+ +VF L R
Sbjct: 257 ILNAC---TSLEQGTLLHSVIMKAG-FELDVRVGTALVNMFSKCGSVVDALKVFQKLPQR 312
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W +++S + + L + ++ ++ + D + ++ C + D+ G V
Sbjct: 313 NVVSWTSVISAYAQAGEPERALECYAKMLNEG-MVADKRAYTTILNVCAMLGDIEKGKAV 371
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + G+ D+ N LI MY KC +++ +LF+ M R++VSW ++I G+ ++
Sbjct: 372 HGHIVQSGIATDIITENGLIDMYVKCGRLKDAYRLFQDMNVRDVVSWTTLIEGWVQHRQY 431
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ D M EG +P+ +T + VL
Sbjct: 432 QEALDTFNDMQ--LEGVMPNTVTFLGVL 457
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 4/174 (2%)
Query: 75 EESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFI 134
E ++L +L E + AD K A +L C DIE GK VH + S + D I
Sbjct: 329 EPERALECYAKMLNEGM-VAD-KRAYTTILNVCAMLGDIEKGKAVHGHIVQSG-IATDII 385
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
LI MY CG D+ R+F + R++ W L+ G+ ++ Y + L F ++ +
Sbjct: 386 TENGLIDMYVKCGRLKDAYRLFQDMNVRDVVSWTTLIEGWVQHRQYQEALDTFNDMQLEG 445
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
+ P+ TF V+KAC G+ + G +H + GL + + +AL MY KC
Sbjct: 446 VM-PNTVTFLGVLKACAGMGSLVDGKRIHARIVEAGLAENAHIRHALADMYAKC 498
>gi|18873857|gb|AAL79803.1|AC079874_26 putative pentatricopeptide repeat domain containing protein [Oryza
sativa Japonica Group]
Length = 391
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 111/192 (57%), Gaps = 4/192 (2%)
Query: 119 VHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNE 178
VH+ V S S+ F+ +T ++ MY CG +++++ D + + + WNA++SGF+ N+
Sbjct: 2 VHDKVIKSGLGSDAFVAST-VVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNK 60
Query: 179 LYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVS 238
+ F E+ D LKPD+FTF V+ C +A + G +HG K ++ D ++S
Sbjct: 61 ESEEAQKFFSEML-DMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYIS 119
Query: 239 NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEG 298
+ L+ MY KC + + + +FE + +R+ VSWN++ICG++ +G E+ + +M +E
Sbjct: 120 STLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQ--KEN 177
Query: 299 FIPDVITVVTVL 310
+P+ T V VL
Sbjct: 178 VVPNHATFVAVL 189
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 8/184 (4%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L C + IE+GK++H + +++I +T L+ MY+ CG DS VF+ ++
Sbjct: 85 ATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISST-LVDMYAKCGDMPDSLLVFEKVE 143
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGF 218
R+ WNA++ G+ + L + L +F + + + P++ TF V++AC G+ D G
Sbjct: 144 KRDFVSWNAMICGYALHGLGVEALRMFERMQKEN-VVPNHATFVAVLRACSHVGLFDDGC 202
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSI--ICG 275
H M L + ++ + G+ +E VK MP + + V W ++ IC
Sbjct: 203 -RYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICK 261
Query: 276 FSEN 279
++
Sbjct: 262 IRQD 265
>gi|357135729|ref|XP_003569461.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Brachypodium distachyon]
Length = 595
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 108/192 (56%), Gaps = 4/192 (2%)
Query: 119 VHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNE 178
+H L S T F+ D + + ++ MY+ CG LD+RR+FD + RN+ W+AL+ G+
Sbjct: 145 LHGLAS-KTPFAEDVFVGSAVLDMYAKCGNLLDARRLFDEMPERNVVSWSALIGGYADAG 203
Query: 179 LYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVS 238
++ L IF + + ++ ++FT C+++ C G+ VH + K L FV
Sbjct: 204 MHPAALWIFRS-ALEEAVEVNDFTVSCIVRVCATATLFDLGAQVHARSIKTALDASPFVG 262
Query: 239 NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEG 298
++L+++Y KC V+ ++F PERNL WN+++ +++G + +F+ ++M +G
Sbjct: 263 SSLVSLYSKCGLVDRAYRIFSAAPERNLGIWNAVLNASAQHGHTATAFERFMEMQ--NDG 320
Query: 299 FIPDVITVVTVL 310
F P+ IT + +L
Sbjct: 321 FRPNYITFLCLL 332
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVF-DSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
S+ +++ L+T Y+ C P R F D W++L+S F +N L F
Sbjct: 49 SSHALLSHHLLTFYARCALPELCLRAFLDLPAPPPAAAWSSLISSFAQNGLPAAAFDAFR 108
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVG----FGSGVHGMAAKMGLIGDVFVSNALIAM 244
+ + D + P KA AD +HG+A+K DVFV +A++ M
Sbjct: 109 RMLAAGVPATDR-SIPSAAKAVAAAADSLRPPLAPHALHGLASKTPFAEDVFVGSAVLDM 167
Query: 245 YGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
Y KC + + +LF+ MPERN+VSW+++I G+++ G
Sbjct: 168 YAKCGNLLDARRLFDEMPERNVVSWSALIGGYADAGM 204
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIA-----MYGKCAFVEEMVKLF-EVMPERNLVSWNSI 272
G +HG K G + + S+AL++ Y +CA E ++ F ++ +W+S+
Sbjct: 31 GQQLHGFLLKGGHLPAIASSHALLSHHLLTFYARCALPELCLRAFLDLPAPPPAAAWSSL 90
Query: 273 ICGFSENGFSCESFDLLIKMMG 294
I F++NG +FD +M+
Sbjct: 91 ISSFAQNGLPAAAFDAFRRMLA 112
>gi|297843162|ref|XP_002889462.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335304|gb|EFH65721.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 608
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 117/210 (55%), Gaps = 8/210 (3%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L ACG+ + ++ GK +H + + SN ++ + L+ MY G ++R+VF+ +
Sbjct: 268 GTVLTACGNLRRLKQGKEIHGKLITNGIGSN-VVVESSLLDMYGKSGSVREARQVFNGMP 326
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+N+ W+AL+ G+ +N + + +F E+ + D + F V+KAC G+A V G
Sbjct: 327 RKNIVSWSALLGGYCQNGEHEKAIEMFREME-----EKDLYCFGTVLKACAGLAAVRLGK 381
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG + G G+V V +ALI +YGK ++ +++ M RN+++WN+++ ++NG
Sbjct: 382 EIHGQYVRRGCFGNVIVESALIDLYGKSGCIDYASRVYSKMSVRNMITWNAMLSALAQNG 441
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ M+ ++G PD I+ + VL
Sbjct: 442 RGEEAVSFFNDMV--KKGIKPDYISFIAVL 469
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 109/189 (57%), Gaps = 1/189 (0%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
++AC ++ +G+ H +V + F + +I++ L MY + P+D+RRVFD + +
Sbjct: 169 VKACFELGEVRLGRCFHGVV-ITHGFEWNHVISSTLAYMYGVNKEPVDARRVFDEMPEPD 227
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W A++S F+KN+LY + L +F + L PD TF V+ ACG + + G +H
Sbjct: 228 VICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIH 287
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G G+ +V V ++L+ MYGK V E ++F MP +N+VSW++++ G+ +NG
Sbjct: 288 GKLITNGIGSNVVVESSLLDMYGKSGSVREARQVFNGMPRKNIVSWSALLGGYCQNGEHE 347
Query: 284 ESFDLLIKM 292
++ ++ +M
Sbjct: 348 KAIEMFREM 356
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 136/276 (49%), Gaps = 14/276 (5%)
Query: 40 LRSIFKEKSSLSLS-AKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKE 98
L+ F +SL L+ + +++A T+ L+ LC+ + L A+ +L H++++
Sbjct: 5 LKRQFSRHASLCLTPSNSSSAPTKQSRILE----LCKLGQ-LTDAIRILNST-HSSEISA 58
Query: 99 ATGV---LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPL-DSRR 154
+ + LLQ C G + H V S D + L+++Y G + ++RR
Sbjct: 59 KSNLYASLLQTCRKVFSFIHGLQFHAHVVKSG-LETDRNVGNSLLSLYFKLGPDMRETRR 117
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VFD + ++ W +++SG+ ++ + L +FVE+ S L+P+ FT +KAC +
Sbjct: 118 VFDGMFVKDAISWTSMMSGYVASKEHVKALEVFVEMVS-FGLQPNKFTLSSAVKACFELG 176
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+V G HG+ G + +S+ L MYG + ++F+ MPE +++ W +++
Sbjct: 177 EVRLGRCFHGVVITHGFEWNHVISSTLAYMYGVNKEPVDARRVFDEMPEPDVICWTAVLS 236
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
FS+N E+ L M +G +PD T TVL
Sbjct: 237 AFSKNDLYEEALGLFYAMHR-GKGLVPDGSTFGTVL 271
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 5/195 (2%)
Query: 82 KALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLIT 141
KA+ + +E + DL G +L+AC + +GK +H F N I+ + LI
Sbjct: 348 KAIEMFRE-MEEKDLY-CFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGN-VIVESALID 404
Query: 142 MYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF 201
+Y G + RV+ + RN+ WNA++S +N + +S F ++ +KPD
Sbjct: 405 LYGKSGCIDYASRVYSKMSVRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKG-IKPDYI 463
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAK-MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV 260
+F V+ ACG V G + AK G+ + +I + G+ EE L +
Sbjct: 464 SFIAVLTACGHTGLVEEGRNYFALMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLDR 523
Query: 261 MPERNLVSWNSIICG 275
RN S ++ G
Sbjct: 524 AECRNDASLWGVLLG 538
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 116/209 (55%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L C +D+++G ++H +L+ F D +++ LI Y CG L++R+ FD L+
Sbjct: 235 VLGLCAQIRDLQLGLQIHAQLLKTGLVF--DVFVSSTLIDTYGKCGEVLNARKQFDGLRD 292
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
RN+ W A+++ + +N + + L++F ++ + + +P+ FTF ++ AC + + +G
Sbjct: 293 RNVVAWTAVLTAYLQNGHFEETLNLFTKMELE-DTRPNEFTFAVLLNACASLVALAYGDL 351
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG G + V NALI MY K ++ +F M R++++WN++ICG+S +G
Sbjct: 352 LHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGL 411
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ + MM E P+ +T + VL
Sbjct: 412 GKQALLVFQDMMSAGE--CPNYVTFIGVL 438
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 110/221 (49%), Gaps = 5/221 (2%)
Query: 92 HNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN--TRLITMYSLCGFP 149
H LKE LL+ K + GK +H + Q S D I LI +YS CG
Sbjct: 19 HPCSLKEVVN-LLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQS 77
Query: 150 LDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKA 209
+R++FD + RN+ W+AL+ G+ +VL +F L S P+ + F V+
Sbjct: 78 KCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSC 137
Query: 210 CGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSW 269
C V G HG K GL+ +V NALI MY +C V+ +++ + +P ++ S+
Sbjct: 138 CADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSY 197
Query: 270 NSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
NSI+ E+G E+ +L +M+ +E I D +T V+VL
Sbjct: 198 NSILSALVESGCRGEAAQVLKRMV--DECVIWDSVTYVSVL 236
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 101/192 (52%), Gaps = 4/192 (2%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSR-RVFDSLK 160
++L C ++ GK+ H + S + ++ N LI MYS C F +DS ++ D++
Sbjct: 133 IVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNA-LIHMYSRC-FHVDSAMQILDTVP 190
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
++F +N+++S ++ + + + + + D+ T+ V+ C I D+ G
Sbjct: 191 GDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVI-WDSVTYVSVLGLCAQIRDLQLGL 249
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H K GL+ DVFVS+ LI YGKC V K F+ + +RN+V+W +++ + +NG
Sbjct: 250 QIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNG 309
Query: 281 FSCESFDLLIKM 292
E+ +L KM
Sbjct: 310 HFEETLNLFTKM 321
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 117/208 (56%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG+ D G++V+ S + + N+ LI+MY+ G D+R+ FD L +
Sbjct: 360 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNS-LISMYARSGRMEDARKAFDILFEK 418
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL +NA+V G+ KN + +F E++ DT + FTF ++ I +G G +
Sbjct: 419 NLVSYNAIVDGYAKNLKSEEAFLLFNEIA-DTGIGISAFTFASLLSGAASIGAMGKGEQI 477
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K G + + NALI+MY +C +E ++F M +RN++SW S+I GF+++GF+
Sbjct: 478 HGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFA 537
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ KM+ E G P+ IT V VL
Sbjct: 538 TRALEMFHKML--ETGTKPNEITYVAVL 563
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 111/191 (58%), Gaps = 6/191 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC---GFPLDSRRVFDSL 159
+L AC + +GK++H V + D + L+ MY+ C G DSR+VF+ +
Sbjct: 255 VLSACTELGLLALGKQLHSRV-IRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM 313
Query: 160 KTRNLFQWNALVSGFTKN-ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
N+ W A+++ + ++ E + + +F ++ S ++P++F+F V+KACG ++D
Sbjct: 314 PEHNVMSWTAIITAYVQSGECDKEAIELFCKMISG-HIRPNHFSFSSVLKACGNLSDPYT 372
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G V+ A K+G+ V N+LI+MY + +E+ K F+++ E+NLVS+N+I+ G+++
Sbjct: 373 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 432
Query: 279 NGFSCESFDLL 289
N S E+F L
Sbjct: 433 NLKSEEAFLLF 443
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 113/212 (53%), Gaps = 7/212 (3%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL-K 160
+LL++C ++ ++GK VH + S + ++NT LI++YS CG +R +F+ +
Sbjct: 49 ILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNT-LISLYSKCGDTETARLIFEGMGN 107
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R+L W+A+VS F N + + F+++ + P+ + F VI+AC G
Sbjct: 108 KRDLVSWSAMVSCFANNSMEWQAIWTFLDML-ELGFYPNEYCFAAVIRACSNANYAWVGE 166
Query: 221 GVHGMAAKMGLI-GDVFVSNALIAMYGK-CAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
++G K G + DV V LI M+ K + K+F+ MPERNLV+W +I F++
Sbjct: 167 IIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQ 226
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + ++ DL + M G++PD T +VL
Sbjct: 227 LGCARDAIDLFLDME--LSGYVPDRFTYSSVL 256
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 8/199 (4%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDS-RRVFDSL 159
+++AC + +G+ ++ V + D + LI M+ L S +VFD +
Sbjct: 150 AAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKM 209
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
RNL W +++ F + D + +F+++ + PD FT+ V+ AC + + G
Sbjct: 210 PERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYV-PDRFTYSSVLSACTELGLLALG 268
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAF---VEEMVKLFEVMPERNLVSWNSIICGF 276
+H ++GL DV V +L+ MY KCA V++ K+FE MPE N++SW +II +
Sbjct: 269 KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAY 328
Query: 277 SENGFSC--ESFDLLIKMM 293
++G C E+ +L KM+
Sbjct: 329 VQSG-ECDKEAIELFCKMI 346
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 75/148 (50%), Gaps = 3/148 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+++H + SN I N LI+MYS CG + +VF+ ++ RN+ W ++++GF
Sbjct: 474 GEQIHGRLLKGGYKSNQCICNA-LISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 532
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG-VHGMAAKMGLIGD 234
K+ T L +F ++ +T KP+ T+ V+ AC + + G + M + G++
Sbjct: 533 KHGFATRALEMFHKML-ETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR 591
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ ++ + G+ + E ++ MP
Sbjct: 592 MEHYACMVDLLGRSGLLVEAMEFINSMP 619
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
++L + PD T+ ++K+C + G VH + GL D V N LI++Y K
Sbjct: 32 LDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSK 91
Query: 248 CAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
C E +FE M +R+LVSW++++ F+ N ++ + M+ E GF P+
Sbjct: 92 CGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDML--ELGFYPNEYCF 149
Query: 307 VTVL 310
V+
Sbjct: 150 AAVI 153
>gi|297738569|emb|CBI27814.3| unnamed protein product [Vitis vinifera]
Length = 555
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 123/240 (51%), Gaps = 14/240 (5%)
Query: 74 CEESKSLNKALSLLQENLHNADL---KEATGVLLQACGHEKDIEIGKRVHELVSASTQFS 130
CEE+ +L N+H A L ++++C + GK VH + F
Sbjct: 109 CEEALAL-------YSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNI-VKHGFD 160
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
+D + + L+ MYS G L VF + RN+ W A+++G+ +N + + L +F E+
Sbjct: 161 SDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREM 220
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
+ +P+ T V+ AC G+ + G +HG K+G+ DV ++NALIA+YGKC
Sbjct: 221 VG-SGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGN 279
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
VE LF+ M +NLVSWN++I + +N + L +M + F D IT+V+V+
Sbjct: 280 VETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDF--DYITMVSVI 337
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 125/245 (51%), Gaps = 12/245 (4%)
Query: 68 QEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSAST 127
+ ++TL + + + L + N H+ LL C D+ R+H LV +
Sbjct: 4 KSLSTLLKGLAPIKRVLFDFRTNYHSRSFN----YLLNCCSSLPDL---SRIHALV-VTN 55
Query: 128 QFSNDFIINTRLITMYSLCGFPLD-SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
+ +++T+LI +D +R++FD + R++F WN L+ G+ + L++
Sbjct: 56 GCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALAL 115
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
+ + L PDN+TFP V+++C ++ + G VH K G DVFV ++L+AMY
Sbjct: 116 YSNMHG-AGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYS 174
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
+ M +F M RN+VSW ++I G+ +N + E + +M+G G P+ +T+
Sbjct: 175 QSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVG--SGTQPNAVTL 232
Query: 307 VTVLP 311
V+VLP
Sbjct: 233 VSVLP 237
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 6/137 (4%)
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
ITM S+ L +R VF+ L R++ W +++ + D L +F + D +KP+
Sbjct: 331 ITMVSVISAYL-AREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRM-KDEGVKPN 388
Query: 200 NFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
+FTF V AC G+ + G M ++ V ++ + G+ + E +
Sbjct: 389 SFTFAAVFTACRHSGLVEEG-RKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEF 447
Query: 258 FEVMP-ERNLVSWNSII 273
+ MP E ++ W +++
Sbjct: 448 IDKMPVEPDVSVWGALL 464
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 111/208 (53%), Gaps = 2/208 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL ACG D+E+G+ V V N +I + LI+MY+ CG +RR+FD + R
Sbjct: 230 LLGACGELGDLELGRWVEGFVVERGMTLNSYI-GSALISMYAKCGELESARRIFDGMAAR 288
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA++SG+ +N + + + +F + D + + T V+ AC I + G +
Sbjct: 289 DVITWNAVISGYAQNGMADEAILLFHGMKEDC-VTANKITLTAVLSACATIGALDLGKQI 347
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
A++ G D+FV+ ALI MY K ++ ++F+ MP++N SWN++I + +G +
Sbjct: 348 DEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKA 407
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M G P+ IT V +L
Sbjct: 408 KEALSLFQHMSDEGGGARPNDITFVGLL 435
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 97/172 (56%), Gaps = 2/172 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LIT Y+ CG +R+VFD + R+ WN++++G+ K + + +F E+ +P
Sbjct: 163 LITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEP 222
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D + ++ ACG + D+ G V G + G+ + ++ +ALI+MY KC +E ++F
Sbjct: 223 DEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIF 282
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ M R++++WN++I G+++NG + E+ L M E+ + IT+ VL
Sbjct: 283 DGMAARDVITWNAVISGYAQNGMADEAILLFHGMK--EDCVTANKITLTAVL 332
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 9/197 (4%)
Query: 117 KRVHE--LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
++VH +V++S N+ +++ + L FP S N + +N ++
Sbjct: 41 QQVHTQMVVNSSIHTPNNHLLSKAI----HLKNFPYSSLLFSHIAPHPNDYAFNIMIRAL 96
Query: 175 TKN-ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
T Y LS+F + S L PDNFTFP +C +A + H + K+ L
Sbjct: 97 TTTWHNYPLALSLFHRMMS-LSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHS 155
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
D +++LI Y +C V K+F+ +P R+ VSWNS+I G+++ G + E+ ++ + M
Sbjct: 156 DPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVF-REM 214
Query: 294 GCEEGFIPDVITVVTVL 310
G +GF PD +++V++L
Sbjct: 215 GRRDGFEPDEMSLVSLL 231
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 113/209 (54%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++++C + +G+ VH A +ND + + L+ MY+ G ++R FD + R
Sbjct: 147 VVKSCAALGAMSLGRLVHRTARA-IGLANDVYVGSALVKMYADAGLLGNARDAFDGIPER 205
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN ++ G K + +F + + + +P+ T C + C AD+ G+ +
Sbjct: 206 DCVLWNVMMDGCIKAGDVDGAVRLFRNMRA-SGCEPNFATLACFLSVCATDADLLSGAQL 264
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A K GL +V V+N L+AMY KC +++ +LFE+MP+ +LV+WN +I G +NG
Sbjct: 265 HSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLF 324
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+F L M G PD IT+V++LP
Sbjct: 325 VEAFGLFYDMQ--RSGARPDSITLVSLLP 351
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 111/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C + +G+++H V + + + L+ MY+ CG S +F + +
Sbjct: 450 VLPGCASMAALPLGQQIHGYV-LRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQK 508
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN+++S F++N + L +F ++ + +K +N T + AC + + +G +
Sbjct: 509 DEVTWNSMISSFSQNGKPQEALDLFRQMCMEG-IKYNNITISAALSACASLPAIYYGKEI 567
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ K + D+F +ALI MY KC +E +++FE MP++N VSWNSII + +G
Sbjct: 568 HGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLV 627
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
ES LL M EEG+ PD +T + ++
Sbjct: 628 KESVSLLHGMQ--EEGYKPDHVTFLALI 653
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 8/205 (3%)
Query: 103 LLQACGHEKDIEIGKRVHE--LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL- 159
+L+ C + +G ++H +VS + N ++TRL+ MY L D+ VF +L
Sbjct: 38 VLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSALP 97
Query: 160 --KTRNLFQWNALVSGFTKNELYTDVLSIFVEL-SSDTELKPDNFTFPCVIKACGGIADV 216
+ WN L+ GFT + + +V++ S PD T P V+K+C + +
Sbjct: 98 RAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAM 157
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G VH A +GL DV+V +AL+ MY + F+ +PER+ V WN ++ G
Sbjct: 158 SLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGC 217
Query: 277 SENGFSCESFDLLIKMM--GCEEGF 299
+ G + L M GCE F
Sbjct: 218 IKAGDVDGAVRLFRNMRASGCEPNF 242
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L C + D+ G ++H L + + + L+ MY+ C D+ R+F+ + +
Sbjct: 249 LSVCATDADLLSGAQLHSL-AVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDD 307
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L WN ++SG +N L+ + +F ++ + +PD+ T ++ A + + G VH
Sbjct: 308 LVTWNGMISGCVQNGLFVEAFGLFYDMQR-SGARPDSITLVSLLPALTDLNGLKQGKEVH 366
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G + + DVF+ +AL+ +Y KC V L++ ++V +++I G+ NG S
Sbjct: 367 GYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSE 426
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ + ++ E+ P+ +T+ +VLP
Sbjct: 427 EALQMFRYLL--EQCIKPNAVTIASVLP 452
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 103/208 (49%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL A ++ GK VH + + + F+++ L+ +Y C ++ ++D+ +
Sbjct: 349 LLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSA-LVDIYFKCRDVRMAQNLYDAARAI 407
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ + ++SG+ N + + L +F L +KP+ T V+ C +A + G +
Sbjct: 408 DVVIGSTMISGYVLNGMSEEALQMFRYLLEQC-IKPNAVTIASVLPGCASMAALPLGQQI 466
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + +V +AL+ MY KC ++ +F M +++ V+WNS+I FS+NG
Sbjct: 467 HGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKP 526
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL +M C EG + IT+ L
Sbjct: 527 QEALDLFRQM--CMEGIKYNNITISAAL 552
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 3/160 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC I GK +H V+ D + LI MY+ CG + RVF+ + +N
Sbjct: 552 LSACASLPAIYYGKEIHG-VTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKN 610
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WN+++S + + L + +S+ + + KPD+ TF +I AC V G +
Sbjct: 611 EVSWNSIISAYGAHGLVKESVSLLHGMQEEG-YKPDHVTFLALISACAHAGLVEEGVQLF 669
Query: 224 GMAAKMGLIGDVFVSNA-LIAMYGKCAFVEEMVKLFEVMP 262
K LI A ++ +Y + +++ ++ MP
Sbjct: 670 QCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMP 709
>gi|357508177|ref|XP_003624377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499392|gb|AES80595.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 487
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 104/195 (53%), Gaps = 2/195 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L CG ++D G + H L + F + + + LI++YS CG D+ RVFD + RN
Sbjct: 115 LSLCGSKRDFYGGIQYHCL-AIRIGFIANVYVGSSLISLYSRCGLLGDAYRVFDEMSVRN 173
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W A+++GF + L +F + ELKP+ FT+ ++ AC G +G G GVH
Sbjct: 174 VVSWTAIIAGFAQEWRVDMCLELFRRMRG-LELKPNYFTYTSLLSACMGSGALGHGRGVH 232
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+MG + V NALIAMY KC + + + +FE M +++V+WNS+I G G +
Sbjct: 233 CQIIQMGFHCYLHVENALIAMYSKCGVIVDALYIFENMVSKDVVTWNSMIVGMRIMGVNP 292
Query: 284 ESFDLLIKMMGCEEG 298
++ L + C G
Sbjct: 293 DAVTFLGILSSCRHG 307
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 123/240 (51%), Gaps = 14/240 (5%)
Query: 74 CEESKSLNKALSLLQENLHNADL---KEATGVLLQACGHEKDIEIGKRVHELVSASTQFS 130
CEE+ +L N+H A L ++++C + GK VH + F
Sbjct: 109 CEEALAL-------YSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNI-VKHGFD 160
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
+D + + L+ MYS G L VF + RN+ W A+++G+ +N + + L +F E+
Sbjct: 161 SDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREM 220
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
+ +P+ T V+ AC G+ + G +HG K+G+ DV ++NALIA+YGKC
Sbjct: 221 VG-SGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGN 279
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
VE LF+ M +NLVSWN++I + +N + L +M + F D IT+V+V+
Sbjct: 280 VETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDF--DYITMVSVI 337
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 125/245 (51%), Gaps = 12/245 (4%)
Query: 68 QEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSAST 127
+ ++TL + + + L + N H+ LL C D+ R+H LV +
Sbjct: 4 KSLSTLLKGLAPIKRVLFDFRTNYHSRSFN----YLLNCCSSLPDLS---RIHALV-VTN 55
Query: 128 QFSNDFIINTRLITMYSLCGFPLD-SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
+ +++T+LI +D +R++FD + R++F WN L+ G+ + L++
Sbjct: 56 GCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALAL 115
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
+ + L PDN+TFP V+++C ++ + G VH K G DVFV ++L+AMY
Sbjct: 116 YSNMHG-AGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYS 174
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
+ M +F M RN+VSW ++I G+ +N + E + +M+G G P+ +T+
Sbjct: 175 QSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVG--SGTQPNAVTL 232
Query: 307 VTVLP 311
V+VLP
Sbjct: 233 VSVLP 237
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + + +GK +H D + LI +Y CG +R +FD + +
Sbjct: 235 VLPACAGLEFLNLGKLIHGY-GIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQ 293
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL WNA+++ + +N + + +F + ++ ++ D T VI AC + + G +
Sbjct: 294 NLVSWNAMIAAYEQNNAGANAVKLFRRMQAE-KVDFDYITMVSVISACASLGALNTGRWM 352
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + + GL +V ++NALI MY KC ++ ++FE +P R++VSW S+I + +G
Sbjct: 353 HELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHG 412
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M +EG P+ T V
Sbjct: 413 EDALKLFSRMK--DEGVKPNSFTFAAVF 438
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 6/174 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC + G+ +HELV N I N LI MY+ CG +R VF+ L R
Sbjct: 336 VISACASLGALNTGRWMHELVKRKGLEINVSITNA-LIDMYAKCGNIDLAREVFERLPCR 394
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
++ W +++ + D L +F + D +KP++FTF V AC G+ + G
Sbjct: 395 SVVSWTSMIGACASHGHGEDALKLFSRMK-DEGVKPNSFTFAAVFTACRHSGLVEEG-RK 452
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
M ++ V ++ + G+ + E + + MP E ++ W +++
Sbjct: 453 HFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALL 506
>gi|357517875|ref|XP_003629226.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523248|gb|AET03702.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 510
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 114/207 (55%), Gaps = 8/207 (3%)
Query: 109 HEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYS-LCGFPLD-SRRVFDSLKTRNLFQ 166
H K I+ K+ H + + FI +LI YS L G ++ +R+VFD L R++F
Sbjct: 29 HCKTIDRIKQTHAQIIIGGHKQDPFIA-AKLIDKYSQLGGTNVEHARKVFDDLSERDVFC 87
Query: 167 WNALVSGFTKNELYTDVLSIF--VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
WN ++ G+ + + L ++ + LS P+ +T+P V+KACG D G +HG
Sbjct: 88 WNNVIKGYANMGPFAEALHVYNAMRLSGAA---PNRYTYPFVLKACGAERDCLKGRIIHG 144
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCE 284
K GL D+FV NA +A Y KC +E K+F+ M ER++VSWNS++ G+ NG+ E
Sbjct: 145 NVVKCGLEFDLFVGNAFVAFYAKCKEIEASRKVFDEMLERDIVSWNSMMSGYIANGYVDE 204
Query: 285 SFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ L M+ + PD T+VTVLP
Sbjct: 205 AVMLFCDMLRDDGIGFPDNATLVTVLP 231
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 109/210 (51%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+ACG E+D G+ +H +V +F D + + Y+ C SR+VFD +
Sbjct: 126 VLKACGAERDCLKGRIIHGNVVKCGLEF--DLFVGNAFVAFYAKCKEIEASRKVFDEMLE 183
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK-PDNFTFPCVIKACGGIADVGFGS 220
R++ WN+++SG+ N + + +F ++ D + PDN T V+ A AD+ G
Sbjct: 184 RDIVSWNSMMSGYIANGYVDEAVMLFCDMLRDDGIGFPDNATLVTVLPAFAEKADIHAGY 243
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H K G+ D V LI +Y C ++ +F+ +P+RN++ W++II + +G
Sbjct: 244 WIHCYIVKTGMKLDPAVGCGLITLYSNCGYIRMAKAVFDQIPDRNVIVWSAIIRCYGMHG 303
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ E+ + +++ E G D I +++L
Sbjct: 304 FAQEALSMFRQLV--ELGLHLDGIVFLSLL 331
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 108/210 (51%), Gaps = 5/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT- 161
+L+AC + G+ +H + D + LI+ +S CG +R VFD L
Sbjct: 133 VLKACARLSLLHKGREIHS-STLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPAL 191
Query: 162 -RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ WN+++SG+ ++ Y L +F EL D L PD T + CG + + G
Sbjct: 192 VRDVVSWNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGK 251
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG+ G + DVFV ++LI MY KC +E+ K+F+ +P RN V W S+I G++++
Sbjct: 252 KIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSD 311
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L +M GF D T+ VL
Sbjct: 312 LFKEAIELFREMQ--IGGFAADAATIACVL 339
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 123/238 (51%), Gaps = 6/238 (2%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVLLQA---CGHEKDIEIGKRVHELVSASTQFSND 132
+S AL + E L + L L+ A CG +++GK++H L + S F D
Sbjct: 207 QSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSG-FVLD 265
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
+ + LI MYS CG D+R+VFD + RN W ++++G+ +++L+ + + +F E+
Sbjct: 266 VFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQI 325
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
D T CV+ ACG + G +H + + D+ NALI MY KC ++
Sbjct: 326 GG-FAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQ 384
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +++F + + ++ SW+++I G + NG S ++ L +M + P+ IT + VL
Sbjct: 385 KALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISD-IRPNEITFLGVL 441
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 93/161 (57%), Gaps = 4/161 (2%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
SR +F + N+F WN + ++++ + ++++ + + L PDN++FP V+KAC
Sbjct: 80 SRTLFFQIHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTL-PDNYSFPFVLKACA 138
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE--RNLVSW 269
++ + G +H K+G+ DVFV NALI+ + C VE +F+++P R++VSW
Sbjct: 139 RLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSW 198
Query: 270 NSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
NS+I G+ ++ + + +++G + PD +T+V+ L
Sbjct: 199 NSMISGYLQSHRYELALKVFWELLG-DGSLSPDEVTLVSAL 238
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 7/210 (3%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
+S +A+ L +E +A + +L ACGH + G+ +H L D
Sbjct: 309 QSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIH-LYCERNSIEMDL 367
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
LI MYS CG + +F L ++F W+A++SG N L +F ++
Sbjct: 368 NARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMI 427
Query: 194 TELKPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
++++P+ TF V+ AC GG D G + M L + ++ + G+ +
Sbjct: 428 SDIRPNEITFLGVLCACNHGGFVDKGL-YYFNAMTQIYNLTPGIEHYGCMVDLLGRANLL 486
Query: 252 EEMVKLFEVMP-ERNLVSWNSIICGFSENG 280
E K +P + ++V W S++ +G
Sbjct: 487 VEAEKFIRTLPIQPDVVIWRSLLFACRNHG 516
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 37/268 (13%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVL--LQACGHEKDIEIGKRVHELVSASTQFSNDF 133
SK ++++ L E L + ++ L AC KD+ +GKRVH V +
Sbjct: 197 RSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVK-DLKIEPVR 255
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT------------------ 175
++ LI MY+ CG + +FD++K+R++ W A+V+GFT
Sbjct: 256 VLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPER 315
Query: 176 -------------KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ + +VLS+F E+ + +KPD FT ++ AC + + G +
Sbjct: 316 DFVSWTAMIDGYLQVNRFKEVLSLFREMQA-ANIKPDEFTMVSILTACAHLGALELGEWI 374
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
K + D FV NALI MY C VE+ +++F MP R+ +SW ++I G + NG+
Sbjct: 375 KAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYG 434
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ D+ +M+ + PD +T + VL
Sbjct: 435 EEALDMFSQML--KASITPDEVTCIGVL 460
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 101/202 (50%), Gaps = 4/202 (1%)
Query: 81 NKALSLLQENLHNADLKE--ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
N A+S+ E L + + LL+ + ++ G+ +H+ + FS++ +
Sbjct: 101 NSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHI-VKLGFSSNVFVQNA 159
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI +YSL G +R VFD ++ WN ++SG+ +++ + + + +F E+ + P
Sbjct: 160 LIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMER-MRVLP 218
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ T V+ AC + D+ G VH + + + NALI MY C ++ + +F
Sbjct: 219 SSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIF 278
Query: 259 EVMPERNLVSWNSIICGFSENG 280
+ M R+++SW +I+ GF+ G
Sbjct: 279 DNMKSRDVISWTAIVTGFTNLG 300
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 3/159 (1%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+R VFD++ N F WN ++ G+++ +S++ E+ + + PD +T+P ++K
Sbjct: 72 ARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEML-ERGVMPDEYTYPFLLKRFT 130
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
V G +H K+G +VFV NALI +Y V +F+ + ++V+WN
Sbjct: 131 RDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNV 190
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+I G++ + ES L +M +P IT+V+VL
Sbjct: 191 MISGYNRSKQFDESMKLFDEMERMR--VLPSSITLVSVL 227
>gi|225434183|ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 102/179 (56%), Gaps = 2/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + +++ Y LCG +RRVFD + R++ WNA++ G+ +N Y+D + +F E+
Sbjct: 178 DVVSWNTMVSGYCLCGDLESARRVFDQMLERDVISWNAMIGGYVQNGKYSDAIEVFHEMQ 237
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ PD+ T V+ AC + + FG + G ++++ NALI MY KC +
Sbjct: 238 KVGGVVPDDVTLVSVLSACAHVGALDFGRWIDRFVGWRGRGLNLYLGNALIDMYAKCGTM 297
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
EE ++F+ M ER+++SW+++ICG +G + E+F KM+ C G P+ +T + +L
Sbjct: 298 EEARRIFDGMRERDVISWSTMICGSGTHGDADEAFGYYSKMLEC--GVKPNEVTFMGLL 354
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF-VELSSDTELKPDNFTFPCVIKACGGI 213
+F L N+F WNA++ + L+ F +LS + P+ + + +IKAC G+
Sbjct: 67 IFAQLPNPNVFSWNAIIKAHINCGAWEHALNCFNRQLSLPSAPNPNEYIYTSLIKACAGL 126
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
+ G VH + K GL ++ + +L+ MY K ++F+ MP R++VSWN+++
Sbjct: 127 EAIADGLKVHAVVIKSGLDNNIHLGTSLVDMYFKFREPASAGQVFDEMPLRDVVSWNTMV 186
Query: 274 CGF 276
G+
Sbjct: 187 SGY 189
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 116/211 (54%), Gaps = 6/211 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ACG +D+++ +++H +A N + ++ MY+ CG LD+++ FDSL+ +
Sbjct: 469 LLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEK 528
Query: 163 NLFQWNALVSGF--TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
L W+ +++ + +K+ F E+ ++ +KP TF + AC +A + G
Sbjct: 529 GLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEG-IKPGEVTFVSALDACAAMATLEHGR 587
Query: 221 GVHGMAAKMGLIGDVFV-SNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H AA G + V N +I MYGKC + +F+ MPE+ L+SWNS+I ++ N
Sbjct: 588 SMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHN 647
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + E+ L +M+ +GF PD T V++L
Sbjct: 648 GHALEALSSLQEML--LQGFDPDSGTSVSIL 676
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 91/169 (53%), Gaps = 3/169 (1%)
Query: 142 MYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF 201
MY C D+ VFD + +N+F W +++ +++N Y + L +F + + +PD
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGT-RPDKV 59
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
F + AC ++ G +H GL ++ +SN+L+ MYGKC V K+F+ M
Sbjct: 60 VFVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGM 119
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
R++VSW +++ +++NG ++ + L +M EG P+ +T VT++
Sbjct: 120 LLRDVVSWTAMLAVYAQNGCWSQALECLSRMDA--EGVKPNQVTFVTIV 166
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 2/191 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+ L AC +++ G+++H V S SN II+ L+ MY C + +VFD +
Sbjct: 63 IALDACAASGELDHGRQIHSSVVGSGLTSN-IIISNSLVNMYGKCQDVPCAEKVFDGMLL 121
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ W A+++ + +N ++ L + ++ +KP+ TF ++ C + + G
Sbjct: 122 RDVVSWTAMLAVYAQNGCWSQALECLSRMDAEG-VKPNQVTFVTIVDVCAKLRLLDLGRK 180
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H GL D + NAL+ MYG C ++M +F M + +++ W ++I G S+NG
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240
Query: 282 SCESFDLLIKM 292
E + KM
Sbjct: 241 YEEGLLVFRKM 251
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 108/213 (50%), Gaps = 10/213 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC + + + G+ +H V + + +ITMY CG + VF+++ +
Sbjct: 367 VLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRK 426
Query: 163 NLFQWNALVSGFTKNELYTDVLSIF--VELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ WNA+++ N + D L +F +EL L+ + FT +++ACGG+ D+
Sbjct: 427 DDVSWNAVINASVGNSKFQDALELFHGMELEG---LRSNEFTLLSLLEACGGLEDLKLAR 483
Query: 221 GVHGMAAKMGLIGD-VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF--S 277
+H AA G G+ V N+++ MY +C + + K F+ + E+ LV+W+ I+ + S
Sbjct: 484 QIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQS 543
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++G +F +M EG P +T V+ L
Sbjct: 544 KDGPGRRAFKFFQEMEA--EGIKPGEVTFVSAL 574
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 108/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ C + +++G+++H + + D I+ L+ MY CG D + VF +
Sbjct: 165 IVDVCAKLRLLDLGRKIHHRI-INEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQS 223
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +++G ++N Y + L +F ++ + +K + T+ +++ C + V G +
Sbjct: 224 SVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEG-VKANEVTYMSMVEVCRNLDAVKEGEMI 282
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ ++ +LI++YG+C ++ L E M +R++V+WN+++ ++NG +
Sbjct: 283 DARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDN 342
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ LL +M EGF + +T ++VL
Sbjct: 343 WEAIHLLRRMD--MEGFGANKVTYLSVL 368
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 117/209 (55%), Gaps = 4/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL AC ++ + G+RVH + T++ + TRL+ Y C D+R+V D +
Sbjct: 56 ALLNACLDKRALREGQRVHAHM-IKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPE 114
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N+ W A++S +++ ++ LS+F E+ ++ KP+ FTF V+ +C + + G
Sbjct: 115 KNVVSWTAMISRYSQTGHSSEALSVFAEMMR-SDGKPNEFTFATVLTSCIRASGLALGKQ 173
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG+ K +FV ++L+ MY K +EE ++FE +PER++VS +II G+++ G
Sbjct: 174 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGL 233
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ ++ ++ EG P+ +T ++L
Sbjct: 234 DEEALEMFQRLQS--EGMRPNYVTYASLL 260
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 112/210 (53%), Gaps = 3/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L +C + +GK++H L+ + + + + L+ MY+ G ++R +F+ L
Sbjct: 156 ATVLTSCIRASGLALGKQIHGLI-VKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLP 214
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ A+++G+ + L + L +F L S+ ++P+ T+ ++ A G+A + G
Sbjct: 215 ERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEG-MRPNYVTYASLLTALSGLALLDHGK 273
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H + L + N+LI MY KC + +LF+ MPER +SWN+++ G+S++G
Sbjct: 274 QAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHG 333
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E +L ++M E+ PD +T++ VL
Sbjct: 334 LGREVLELF-RLMRDEKRVKPDAVTLLAVL 362
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
++ LI MYS CG ++R+FD++ R WNA++ G++K+ L +VL +F + +
Sbjct: 289 VLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDE 348
Query: 194 TELKPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+KPD T V+ C G + D G +A + G+ D ++ M G+ +
Sbjct: 349 KRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRI 408
Query: 252 EEMVKLFEVMPER 264
+E + + MP +
Sbjct: 409 DEAFEFIKRMPSK 421
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 203 FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ ++ AC + G VH K + ++ L+ YGKC +E+ K+ + MP
Sbjct: 54 YDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 113
Query: 263 ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+N+VSW ++I +S+ G S E+ + +MM + P+ T TVL
Sbjct: 114 EKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGK--PNEFTFATVL 159
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 117/208 (56%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG+ D G++V+ S + + N+ LI+MY+ G D+R+ FD L +
Sbjct: 342 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNS-LISMYARSGRMEDARKAFDILFEK 400
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL +NA+V G+ KN + +F E++ DT + FTF ++ I +G G +
Sbjct: 401 NLVSYNAIVDGYAKNLKSEEAFLLFNEIA-DTGIGISAFTFASLLSGAASIGAMGKGEQI 459
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K G + + NALI+MY +C +E ++F M +RN++SW S+I GF+++GF+
Sbjct: 460 HGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFA 519
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ KM+ E G P+ IT V VL
Sbjct: 520 TRALEMFHKML--ETGTKPNEITYVAVL 545
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 111/191 (58%), Gaps = 6/191 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC---GFPLDSRRVFDSL 159
+L AC + +GK++H V + D + L+ MY+ C G DSR+VF+ +
Sbjct: 237 VLSACTELGLLALGKQLHSRV-IRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM 295
Query: 160 KTRNLFQWNALVSGFTKN-ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
N+ W A+++ + ++ E + + +F ++ S ++P++F+F V+KACG ++D
Sbjct: 296 PEHNVMSWTAIITAYVQSGECDKEAIELFCKMISG-HIRPNHFSFSSVLKACGNLSDPYT 354
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G V+ A K+G+ V N+LI+MY + +E+ K F+++ E+NLVS+N+I+ G+++
Sbjct: 355 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 414
Query: 279 NGFSCESFDLL 289
N S E+F L
Sbjct: 415 NLKSEEAFLLF 425
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 113/212 (53%), Gaps = 7/212 (3%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL-K 160
+LL++C ++ ++GK VH + S + ++NT LI++YS CG +R +F+ +
Sbjct: 31 ILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNT-LISLYSKCGDTETARLIFEGMGN 89
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R+L W+A+VS F N + + F+++ + P+ + F VI+AC G
Sbjct: 90 KRDLVSWSAMVSCFANNSMEWQAIWTFLDML-ELGFYPNEYCFAAVIRACSNANYAWVGE 148
Query: 221 GVHGMAAKMGLI-GDVFVSNALIAMYGK-CAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
++G K G + DV V LI M+ K + K+F+ MPERNLV+W +I F++
Sbjct: 149 IIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQ 208
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + ++ DL + M G++PD T +VL
Sbjct: 209 LGCARDAIDLFLDME--LSGYVPDRFTYSSVL 238
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 8/199 (4%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDS-RRVFDSL 159
+++AC + +G+ ++ V + D + LI M+ L S +VFD +
Sbjct: 132 AAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKM 191
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
RNL W +++ F + D + +F+++ + PD FT+ V+ AC + + G
Sbjct: 192 PERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYV-PDRFTYSSVLSACTELGLLALG 250
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAF---VEEMVKLFEVMPERNLVSWNSIICGF 276
+H ++GL DV V +L+ MY KCA V++ K+FE MPE N++SW +II +
Sbjct: 251 KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAY 310
Query: 277 SENGFSC--ESFDLLIKMM 293
++G C E+ +L KM+
Sbjct: 311 VQSG-ECDKEAIELFCKMI 328
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 75/148 (50%), Gaps = 3/148 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+++H + SN I N LI+MYS CG + +VF+ ++ RN+ W ++++GF
Sbjct: 456 GEQIHGRLLKGGYKSNQCICNA-LISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 514
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG-VHGMAAKMGLIGD 234
K+ T L +F ++ +T KP+ T+ V+ AC + + G + M + G++
Sbjct: 515 KHGFATRALEMFHKML-ETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR 573
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ ++ + G+ + E ++ MP
Sbjct: 574 MEHYACMVDLLGRSGLLVEAMEFINSMP 601
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
++L + PD T+ ++K+C + G VH + GL D V N LI++Y K
Sbjct: 14 LDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSK 73
Query: 248 CAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
C E +FE M +R+LVSW++++ F+ N ++ + M+ E GF P+
Sbjct: 74 CGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDML--ELGFYPNEYCF 131
Query: 307 VTVL 310
V+
Sbjct: 132 AAVI 135
>gi|297741511|emb|CBI32643.3| unnamed protein product [Vitis vinifera]
Length = 1400
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 160/345 (46%), Gaps = 58/345 (16%)
Query: 18 SLRQKKSQPQFPATVIQRNKHSLRSIFKEKSSLSLSA---------------KTNNASTQ 62
S R +K Q + +++ + SLR ++K S +S KT
Sbjct: 845 SPRPRKRQQKMAGSMLLKEHISLRQFIRKKPSSPISVPFSSYGSSFSQNIKRKTKTHKQL 904
Query: 63 GLHFLQEITTLCEESKSLNKALSLLQENL-----------------HNADLKEATGVL-- 103
G+ L TT C E++ + L L+Q+ L H+ L+E + +L
Sbjct: 905 GILNLVSPTTDCAENRQTH--LRLIQDFLPIPTNQFAQKRASDDFAHSNSLEETSNMLET 962
Query: 104 ------------------LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSL 145
L C + ++ G + H ++ T F + + + LI+ YS
Sbjct: 963 NFLNEEESIVDASALSHALSLCASSRSLKSGVQFH-CLAIRTGFVGNVYVGSCLISFYSK 1021
Query: 146 CGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPC 205
CG + RVF+ + +N+ W A+++GF + L L ++ + + T LKP++ TF C
Sbjct: 1022 CGELCHAYRVFEEMPVKNVVSWTAIIAGFAQEWLVDGCLELYSRMRNST-LKPNDLTFTC 1080
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
++ C G +G G H +MG V V+NALI+MY KC VE+ +FE M ++
Sbjct: 1081 LLSTCTGGGSLGRGRSAHCQTIEMGFDSYVHVANALISMYCKCGNVEDAYYIFERMDGKD 1140
Query: 266 LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+VSWNS+I G +++G + ++ DL +M ++ PD IT + VL
Sbjct: 1141 IVSWNSMIAGHAQHGLAVQAIDLFEEMK--KQKLKPDAITFLGVL 1183
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI+MY CG D+ +F+ + +++ WN++++G ++ L + +F E+ +LKP
Sbjct: 1116 LISMYCKCGNVEDAYYIFERMDGKDIVSWNSMIAGHAQHGLAVQAIDLFEEMKKQ-KLKP 1174
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D TF V+ +C + V G + G+ ++ ++ + G+ +EE
Sbjct: 1175 DAITFLGVLSSCRHVGLVKQGQFYFNSMVEHGVKPELDHFACVVDLLGRAGLLEEARDFI 1234
Query: 259 EVMP-ERNLVSWNSII 273
MP N + W S++
Sbjct: 1235 VKMPIHPNAIIWGSLL 1250
>gi|357153150|ref|XP_003576355.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Brachypodium distachyon]
Length = 617
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 112/194 (57%), Gaps = 3/194 (1%)
Query: 118 RVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKN 177
+VH ++ S + F+ N+ L+ +Y CG+ ++++F+++ +++ W AL+SG +
Sbjct: 251 QVHSVILKSGHLKDLFLCNS-LLNVYGRCGYVDLAKKLFEAMPEKDVVSWTALISGLVAS 309
Query: 178 ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFV 237
D F + + P++FTF V+ +C + D+G G H + K GL V
Sbjct: 310 GHQADAFKTFCRMQGAATV-PNSFTFGSVVSSCACVNDLGGGRQCHALVIKHGLESIPTV 368
Query: 238 SNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC-E 296
+++L+ MY KCA +++ ++F+ MP R++VSWN++ICG ++NG S + +L +M+ +
Sbjct: 369 ASSLLDMYSKCAEMDDATRMFDAMPRRDIVSWNAMICGLAQNGRSARALELYDEMLRLHQ 428
Query: 297 EGFIPDVITVVTVL 310
E P+ +T V VL
Sbjct: 429 ESITPNSVTCVGVL 442
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 106/202 (52%), Gaps = 12/202 (5%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E +VH + F+ D + T + +YS G D+R+VF+ + R+L WN L+
Sbjct: 145 LESAWQVHARALKAGAFA-DACVGTGFVRLYSGLGLIGDARKVFEGMPERDLVAWNVLLD 203
Query: 173 -GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG---SGVHGMAAK 228
G E + + + + + ++PD FTF V+ G+A+ G VH + K
Sbjct: 204 CGMRSGEAGSCLQDLVLMIGG--RVQPDEFTFATVVN---GLAERFAGLEAMQVHSVILK 258
Query: 229 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
G + D+F+ N+L+ +YG+C +V+ KLFE MPE+++VSW ++I G +G ++F
Sbjct: 259 SGHLKDLFLCNSLLNVYGRCGYVDLAKKLFEAMPEKDVVSWTALISGLVASGHQADAFKT 318
Query: 289 LIKMMGCEEGFIPDVITVVTVL 310
+M G +P+ T +V+
Sbjct: 319 FCRMQGAAT--VPNSFTFGSVV 338
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 7/178 (3%)
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
NT L + G + + D++ R+ + WN +SG + TD L F+E++
Sbjct: 64 NTLLSGYAASSGLLEAALHLLDAMPERDAWSWNVAISGLARAGRLTDALRRFLEMTR-GP 122
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSG--VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
++PD FT+ V C G A G S VH A K G D V + +Y + +
Sbjct: 123 VQPDAFTYSIVSPCCCGGAGGGLESAWQVHARALKAGAFADACVGTGFVRLYSGLGLIGD 182
Query: 254 MVKLFEVMPERNLVSWNSII-CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+FE MPER+LV+WN ++ CG +G + L+ M+G PD T TV+
Sbjct: 183 ARKVFEGMPERDLVAWNVLLDCGM-RSGEAGSCLQDLVLMIGGR--VQPDEFTFATVV 237
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 111/216 (51%), Gaps = 8/216 (3%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSND--FIINTRLITMYSLCGFPLDSRRVFDS 158
G +L + + G+++H A+ +D + T+L+ MY CG D+ R+FD
Sbjct: 59 GWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDG 118
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK---PDNFTFPCVIKACGGIAD 215
+ R +F WNAL+ + + + ++ + + + PD T V+KACG D
Sbjct: 119 MPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGD 178
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE-RNLVSWNSIIC 274
GS VHG+A K GL V+NAL+ MY KC ++ +++FE M + R++ SWNS I
Sbjct: 179 GRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAIS 238
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G +NG E+ DL +M +GF + T V VL
Sbjct: 239 GCVQNGMFLEALDLFRRMQ--SDGFSMNSYTTVGVL 272
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 113/209 (54%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT- 161
+L+ACG E D G VH L S + + N L+ MY+ CG + RVF+ ++
Sbjct: 169 VLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANA-LVGMYAKCGLLDSALRVFEWMRDG 227
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ WN+ +SG +N ++ + L +F + SD +++T V++ C +A + G
Sbjct: 228 RDVASWNSAISGCVQNGMFLEALDLFRRMQSDG-FSMNSYTTVGVLQVCAELAQLNHGRE 286
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K G ++ NAL+ MY +C +V+ +++F + +++ +SWNS++ + +N
Sbjct: 287 LHAALLKCGTEFNI-QCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRL 345
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ D +M+ + GF PD +V++L
Sbjct: 346 YAEAIDFFGEMV--QNGFNPDHACIVSLL 372
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 107/208 (51%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL A GH + G+ VH + + +D I L+ MY C S RVFD ++ +
Sbjct: 371 LLSAVGHLGRLINGREVHAY-AVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIK 429
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W +++ + ++ Y++ + F + +K D +++AC G+ + V
Sbjct: 430 DHVSWTTIIACYAQSSRYSEAIGKF-RTAQKEGIKVDPMMMGSILEACSGLKSISLLKQV 488
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A + GL+ D+ + N +I +YG+C V + +FE++ ++++V+W S++ F+ENG
Sbjct: 489 HSYAIRNGLL-DLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLL 547
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L KM+ G PD + +V +L
Sbjct: 548 HEAVALFGKML--NAGIQPDSVALVGIL 573
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 5/185 (2%)
Query: 103 LLQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+LQ C + G+ +H L+ T+F+ I L+ MY+ CG+ + RVF +
Sbjct: 271 VLQVCAELAQLNHGRELHAALLKCGTEFN---IQCNALLVMYARCGWVDSALRVFREIGD 327
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ WN+++S + +N LY + + F E+ + PD+ ++ A G + + G
Sbjct: 328 KDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNG-FNPDHACIVSLLSAVGHLGRLINGRE 386
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH A K L D+ ++N L+ MY KC VE ++F+ M ++ VSW +II ++++
Sbjct: 387 VHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSR 446
Query: 282 SCESF 286
E+
Sbjct: 447 YSEAI 451
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 106/210 (50%), Gaps = 5/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L+AC K I + K+VH + D I+ R+I +Y CG + +F+ L
Sbjct: 470 GSILEACSGLKSISLLKQVHSYAIRNGLL--DLILKNRIIDIYGECGEVCYALNIFEMLD 527
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+++ W ++V+ F +N L + +++F ++ + ++PD+ ++ A G++ + G
Sbjct: 528 KKDIVTWTSMVNCFAENGLLHEAVALFGKML-NAGIQPDSVALVGILGAIAGLSSLTKGK 586
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG + + V ++L+ MY C + +K+F+ +++V W ++I +G
Sbjct: 587 EIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHG 646
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ + +M+ E G PD ++ + +L
Sbjct: 647 HGKQAIYIFKRML--ETGVSPDHVSFLALL 674
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C KD +G +VH + + + + + L+ MY C D+ R F+ L +
Sbjct: 215 VLGHCASMKDSVLGAQVHAQ-ALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEK 273
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A+++ +T+NELY D L +F+++ + ++P+ FT+ + +C G+A + G+ +
Sbjct: 274 NVVSWTAVMTAYTQNELYEDALQLFLDMEMEG-VQPNEFTYAVALNSCAGLAALRTGNAL 332
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
K G + VSNAL+ MY K +E+ ++F MP R++VSWN II G++ +G +
Sbjct: 333 GACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLA 392
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E + M+ IP +T V VL
Sbjct: 393 REGMEAFHSMLSA--AVIPSYVTFVGVL 418
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ A + + ++G++ H + ++ N ++ MY C D+ +VF+S+ +
Sbjct: 115 VSATANVRSYDMGRQCHGYAVKAGFAEQRYVFNA-VLYMYCQCAHMEDASKVFESVSGFD 173
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
F +N++++G+ L I ++ + E K D ++ V+ C + D G+ VH
Sbjct: 174 AFAFNSMINGYLDRGQLDGSLGIVRNMTGEAE-KWDYVSYVAVLGHCASMKDSVLGAQVH 232
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
A K L +V+V +AL+ MYGKC V + + FEV+PE+N+VSW +++ +++N
Sbjct: 233 AQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYE 292
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L + M EG P+ T L
Sbjct: 293 DALQLFLDME--MEGVQPNEFTYAVAL 317
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 8/199 (4%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
D+ GK +H + + F D +++ LI+ Y+ CG +R VFD++ RN N L+
Sbjct: 26 DLSKGKALHARLITAAHF--DVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLM 83
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
SG+ + + + L +L + + + + A + G HG A K G
Sbjct: 84 SGYASSGRHKESL----QLLRVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGF 139
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
+V NA++ MY +CA +E+ K+FE + + ++NS+I G+ + G S ++
Sbjct: 140 AEQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRN 199
Query: 292 MMGCEEGFIPDVITVVTVL 310
M G E + D ++ V VL
Sbjct: 200 MTGEAEKW--DYVSYVAVL 216
>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 94/164 (57%), Gaps = 1/164 (0%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F D + R++ M+ CG +D+RR+FD + RNL WN ++SG + + +F+
Sbjct: 6 FEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFL 65
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
+ + +FTF +I+A G+ + G +H KMG+ D+FVS ALI MY KC
Sbjct: 66 NMWEEFS-DAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKC 124
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+E+ +FE MPE+ V WN+II G++ +G+S E+ D+ +M
Sbjct: 125 GSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEM 168
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 111/210 (52%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
V+++A + I IG+++H + +D ++ LI MYS CG D+R VF+ +
Sbjct: 80 AVMIRASAGLELISIGRQLHA-CTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEEMP 138
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ WN +++G+ + + L ++ E+ D+ +K D+FTF +++ C +A V
Sbjct: 139 EKTTVGWNTIIAGYALHGYSEEALDMYYEMR-DSGVKMDHFTFSMIVRICARLASVEHAK 197
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H + G D+ + AL+ Y K +E+ +F+ M +N++SWN++I G+ +G
Sbjct: 198 QAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHG 257
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L +M+ +E P+ IT + VL
Sbjct: 258 RGSEAVELFEQMI--QERMNPNHITFLAVL 285
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 125/233 (53%), Gaps = 8/233 (3%)
Query: 81 NKALSLLQENLHNADL--KEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
+KAL L + +H A E T V +L+AC IE GK+ H + S + T
Sbjct: 296 HKALKLFSK-MHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSG-YETQIYTAT 353
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L+ MY+ GF D+R+ FD L +L W ++++G+ +N + LS++ + L
Sbjct: 354 ALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKIL- 412
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
P+ T V+KAC +A + G +H K GL ++ + +AL MY KC +EE V +
Sbjct: 413 PNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLI 472
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F M +R++VSWN++I G S+NG E+ +L +M EG PD IT VTVL
Sbjct: 473 FRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMR--LEGTKPDHITFVTVL 523
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 101/195 (51%), Gaps = 4/195 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
++VH ++ T +D + + L+ Y G ++R++FD + RNL W ++SG+
Sbjct: 131 ARQVH-VLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYA 189
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
++ + L +F L E + F F V+ A V G VH + K G++ V
Sbjct: 190 SKQMAKEALGVF-GLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFV 248
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
V NAL+ MY KC + + LFE+ ++N ++W+++I G+S+ G S ++ L KM
Sbjct: 249 SVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMH-- 306
Query: 296 EEGFIPDVITVVTVL 310
GF+P T+V VL
Sbjct: 307 YAGFVPSEFTLVGVL 321
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL +K ++ G+ +H + S+ + LI Y+ CG ++ VF++LK +
Sbjct: 13 LLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKHK 72
Query: 163 NLFQWNALVSGFTKNELYTD--VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
N+ +N L+ G + N VL +F + ++ L PD TFP V A F +
Sbjct: 73 NVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNIL-PDAHTFPGVFTAAALNLGCNFDA 131
Query: 221 -GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
VH + K I DVFV ++L+ Y K V E KLF+ MPERNLVSW ++I G++
Sbjct: 132 RQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASK 191
Query: 280 GFSCESFDLL 289
+ E+ +
Sbjct: 192 QMAKEALGVF 201
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC + +E GK++H + + I + L TMY+ CG + +F + R
Sbjct: 421 VLKACSNLAALEQGKQIHAR-TIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQR 479
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
++ WNA++SG ++N + L +F E+ + KPD+ TF V+ AC + V G
Sbjct: 480 DIVSWNAMISGLSQNGHGREALELFEEMRLEGT-KPDHITFVTVLSACSHMGIVKRG 535
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+++N LI Y KC + +FE + +N+VS+N +I G S NG +F L +
Sbjct: 44 YLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMI 103
Query: 296 EEGFIPDVIT 305
+PD T
Sbjct: 104 ANNILPDAHT 113
>gi|356533824|ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 630
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 120/213 (56%), Gaps = 7/213 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ C + ++ ++ H + A+ F+ + + TRL++ Y+ CG SR VF+S++ +
Sbjct: 34 LLQLCIDLRSQKLAQQSHAQILANG-FAQNAFLATRLVSAYATCGELATSRFVFESVEAK 92
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+++ WN+L++G+ KN + L++F E+ + L PD++T V K G + D+ G +
Sbjct: 93 SVYLWNSLINGYVKNHDFRQALALFREMGRNGML-PDDYTLATVFKVFGELEDLVSGKLI 151
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE---- 278
HG ++G + DV V N+L++MY +C + VK+F+ P RN+ S+N +I G +
Sbjct: 152 HGKGIRIGFVSDVVVGNSLMSMYCRCGEFGDAVKVFDETPHRNVGSFNVVISGCAALENC 211
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
N S + M C EGF D TV ++LP
Sbjct: 212 NFTSHDDLSNFFLRMQC-EGFKADAFTVASLLP 243
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 113/221 (51%), Gaps = 6/221 (2%)
Query: 94 ADLKEATGVLLQACGHEKDIEIGKRVHELV---SASTQFSNDFIINTRLITMYSLCGFPL 150
AD +L CG + G+ +H V + +D + + LI MYS +
Sbjct: 233 ADAFTVASLLPVCCGDTGKWDYGRELHCYVVKNGLDLKMDSDVHLGSSLIDMYSRSKKVV 292
Query: 151 DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
RRVFD +K RN++ W A+++G+ +N D L + + ++P+ + + AC
Sbjct: 293 LGRRVFDQMKNRNVYVWTAMINGYVQNGAPDDALVLLRAMQMKDGIRPNKVSLISALPAC 352
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE-RNLVSW 269
G +A + G +HG + KM L DV + NALI MY KC ++ + FE ++ ++W
Sbjct: 353 GLLAGLIGGKQIHGFSIKMELNDDVSLCNALIDMYSKCGSLDYARRAFETSSYFKDAITW 412
Query: 270 NSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+S+I + +G E+ KM+ ++GF PD+ITVV VL
Sbjct: 413 SSMISAYGLHGRGEEAIIAYYKML--QQGFKPDMITVVGVL 451
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 3/172 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+I+ Y+ G + +F +++ +N+ WN+L++GF +N LY D L V + + + KP
Sbjct: 396 MISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGK-KP 454
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D TF C + AC +A + G+ +H K G + D+FV NALIAMY KC V+ ++F
Sbjct: 455 DQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVF 514
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L+SWNS+I G++ NG++ ++F +M E +PD +T + +L
Sbjct: 515 RDIECVDLISWNSLISGYALNGYANKAFKAFEQM--SSERVVPDEVTFIGML 564
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + +++G ++HE + S + ND + LI MY+ CG + +VF ++ +
Sbjct: 463 LSACANLAALQVGNQLHEYILKSG-YMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVD 521
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGF 218
L WN+L+SG+ N F ++SS+ + PD TF ++ AC G+A+ G
Sbjct: 522 LISWNSLISGYALNGYANKAFKAFEQMSSE-RVVPDEVTFIGMLSACSHAGLANQGL 577
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 31/184 (16%)
Query: 151 DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF----------------------- 187
D+R++FD + RNL WN +++G+ N + + +F
Sbjct: 66 DARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVMPERDNFSWALMITCYTRKGK 125
Query: 188 VELSSDT-ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
+E + + EL PD C G A G + + +M D+ N+++A Y
Sbjct: 126 LEKARELLELVPDKLDTACWNAMIAGYAKKGQFNDAKKVFEQMP-AKDLVSYNSMLAGYT 184
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
+ + ++ FE M ERN+VSWN ++ G+ ++G ++ L K+ P+ ++
Sbjct: 185 QNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPN------PNAVSW 238
Query: 307 VTVL 310
VT+L
Sbjct: 239 VTML 242
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE 189
+ D + ++ Y+ G + + F+S+ RN+ WN +V+G+ K+ + +F +
Sbjct: 170 AKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEK 229
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
+ P+ V CG +A G + + +M +V NA+IA Y +
Sbjct: 230 I-------PNPNAVSWVTMLCG-LAKYGKMAEARELFDRMP-SKNVVSWNAMIATYVQDL 280
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
V+E VKLF+ MP ++ VSW +II G+ G
Sbjct: 281 QVDEAVKLFKKMPHKDSVSWTTIINGYIRVG 311
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 11/179 (6%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + T +I Y G ++R+V++ + +++ AL+SG +N + +F +
Sbjct: 296 DSVSWTTIINGYIRVGKLDEARQVYNQMPCKDITAQTALMSGLIQNGRIDEADQMFSRIG 355
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ + C G + G + +M + V N +I+ Y + +
Sbjct: 356 AHDVV--------CWNSMIAGYSRSGRMDEALNLFRQMPIKNSV-SWNTMISGYAQAGQM 406
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++F+ M E+N+VSWNS+I GF +N ++ L+ MMG +EG PD T L
Sbjct: 407 DRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLV-MMG-KEGKKPDQSTFACTL 463
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 239 NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF---SCESFDLL 289
N++I++ K A + + +LF+ M RNLVSWN++I G+ N + E FD++
Sbjct: 52 NSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVM 105
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 102/180 (56%), Gaps = 2/180 (1%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+++G +H S F++ ++ N LI MY+ CG D+ RVF S+ R+ WN L+S
Sbjct: 264 VKLGMGIHGAALKSNHFADVYVANA-LIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLS 322
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G +NELY D L+ F ++ + + KPD + +I A G ++ G VH A + GL
Sbjct: 323 GLVQNELYRDALNYFRDMQNSAQ-KPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLD 381
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
++ + N LI MY KC V+ M FE M E++L+SW +II G+++N E+ +L K+
Sbjct: 382 SNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKV 441
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 112/217 (51%), Gaps = 8/217 (3%)
Query: 96 LKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV 155
L+ A +LL C K + G+++H + S + + T+L+ MY CG D+ +V
Sbjct: 45 LEHAHSLLLDLCVAVKALPQGQQLHARLLKSHLSA---FLATKLLHMYEKCGSLKDAVKV 101
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
FD + R +F WNA++ F + Y + + ++ E+ + D TFP V+KACG + +
Sbjct: 102 FDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRV-LGVAIDACTFPSVLKACGALGE 160
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE--VMPERNLVSWNSII 273
G+ +HG+A K G VFV NALIAMYGKC + LF+ +M + + VSWNSII
Sbjct: 161 SRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSII 220
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ L +M E G + T V L
Sbjct: 221 SAHVTEGKCLEALSLFRRMQ--EVGVASNTYTFVAAL 255
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS--LK 160
+L+ACG + +G +H V+ F + LI MY CG +R +FD ++
Sbjct: 151 VLKACGALGESRLGAEIHG-VAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMME 209
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ WN+++S + LS+F + + + + +TF ++ + V G
Sbjct: 210 KEDTVSWNSIISAHVTEGKCLEALSLFRRMQ-EVGVASNTYTFVAALQGVEDPSFVKLGM 268
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
G+HG A K DV+V+NALIAMY KC +E+ ++F M R+ VSWN+++ G +N
Sbjct: 269 GIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNE 328
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ + M + PD ++V+ ++
Sbjct: 329 LYRDALNYFRDMQNSAQK--PDQVSVLNLI 356
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 102/210 (48%), Gaps = 5/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L+AC K + +H V D ++ ++ +Y G +RR F+S++
Sbjct: 454 GSVLRACSGLKSRNFIREIHGYVFKRDL--ADIMLQNAIVNVYGEVGHRDYARRAFESIR 511
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
++++ W ++++ N L + L +F L T ++PD+ + A ++ + G
Sbjct: 512 SKDIVSWTSMITCCVHNGLPVEALELFYSLK-QTNIQPDSIAIISALSATANLSSLKKGK 570
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG + G + ++++L+ MY C VE K+F + +R+L+ W S+I +G
Sbjct: 571 EIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHG 630
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L KM +E IPD IT + +L
Sbjct: 631 CGNEAIALFKKMT--DENVIPDHITFLALL 658
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 118/217 (54%), Gaps = 11/217 (5%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVS--ASTQFSNDFIINTRLITMYSLCGFPLDSRR 154
K + +LL+ C K++ H+ + ++ + T+L++++ G ++ R
Sbjct: 77 KHPSAILLELCTSMKEL------HQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAAR 130
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VF ++ + ++ ++ G+ +N D +S F + D ++P + F ++K CG A
Sbjct: 131 VFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDG-VRPVVYNFTYLLKVCGDNA 189
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
D+ G +H G +VF ++ MY KC VEE K+F+ MPER+LV WN+II
Sbjct: 190 DLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIIS 249
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G+++NGF + +L+++M EEG PD IT+V++LP
Sbjct: 250 GYAQNGFGKTALELVLRMQ--EEGKRPDSITIVSILP 284
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 113/207 (54%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC D+E G+ VH+L+ + +D + LI+MYS C + +F++L+ +
Sbjct: 384 LHACADLGDVEQGRFVHKLLD-QLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKT 442
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L WNA++ G+ +N + + F ++ +KPD+FT VI A ++ + +H
Sbjct: 443 LVSWNAMILGYAQNGRINEAIDYFCKMQLQN-IKPDSFTMVSVIPALAELSVLPQAKWIH 501
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G+ + L +VFV+ AL+ MY KC V KLF++M ER++ +WN++I G+ +G
Sbjct: 502 GLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGK 561
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L KM +E P+ +T + VL
Sbjct: 562 AALELFEKMK--KEVIKPNEVTFLCVL 586
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 112/209 (53%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L A + IG+ +H S F + ++T L+ MYS CG +R +FD + +
Sbjct: 282 ILPAVADVGSLRIGRSIHGY-SMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGK 340
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN+++ G+ +N + IF ++ D +++ N T + AC + DV G V
Sbjct: 341 TVVSWNSMIDGYVQNGDPGAAMEIFQKMM-DEQVEMTNVTVMGALHACADLGDVEQGRFV 399
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + ++ L DV V N+LI+MY KC V+ ++FE + + LVSWN++I G+++NG
Sbjct: 400 HKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRI 459
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ D KM + PD T+V+V+P
Sbjct: 460 NEAIDYFCKMQ--LQNIKPDSFTMVSVIP 486
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 101/191 (52%), Gaps = 2/191 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ CG D+ GK +H + + SN F + T ++ MY+ C ++ ++FD + R
Sbjct: 181 LLKVCGDNADLRKGKEIHCQLIVNGFASNVFAM-TGVVNMYAKCRLVEEAYKMFDRMPER 239
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN ++SG+ +N L + + + + + +PD+ T ++ A + + G +
Sbjct: 240 DLVCWNTIISGYAQNGFGKTALELVLRMQEEGK-RPDSITIVSILPAVADVGSLRIGRSI 298
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + + G V VS AL+ MY KC V +F+ M + +VSWNS+I G+ +NG
Sbjct: 299 HGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDP 358
Query: 283 CESFDLLIKMM 293
+ ++ KMM
Sbjct: 359 GAAMEIFQKMM 369
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 11/152 (7%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
K +H LV T + + T L+ MY+ CG +R++FD + R++ WNA++ G+
Sbjct: 497 AKWIHGLV-IRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYG 555
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVG---FGSGVHGMAAKMG 230
+ L L +F ++ + +KP+ TF CV+ AC G+ + G FGS M G
Sbjct: 556 THGLGKAALELFEKMKKEV-IKPNEVTFLCVLSACSHSGLVEEGFQYFGS----MKKDYG 610
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
L + A++ + G+ + E + MP
Sbjct: 611 LEPAMDHYGAMVDLLGRANRLNEAWDFIQKMP 642
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 107/198 (54%), Gaps = 4/198 (2%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL+ C D+ G+ VH + A +++ I +T L MY C P D+RRVFD + +
Sbjct: 21 ALLKLCAARADLATGRAVHAQLEARG-LASESIASTALANMYFKCRRPADARRVFDRMPS 79
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE-LKPDNFTFPCVIKACGGIADVGFGS 220
R+ WNA+V+G+ +N L + + V + + +PD+ T V+ AC +
Sbjct: 80 RDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACR 139
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH A + GL V VS A++ Y KC VE +F+ MP RN VSWN++I G+++NG
Sbjct: 140 EVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNG 199
Query: 281 FSCESFDLLIKMMGCEEG 298
+ E+ L +M+ +EG
Sbjct: 200 NATEAMALFWRMV--QEG 215
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 115/210 (54%), Gaps = 9/210 (4%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL---K 160
LQACG ++ +RVHEL+ S++ + LIT Y+ C + +VF+ L K
Sbjct: 227 LQACGELGYLDEVRRVHELL-VRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKK 285
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
TR WNA++ GFT+NE D +F + + ++PD+FT VI A I+D
Sbjct: 286 TR--ISWNAMILGFTQNECPEDAERLFARMQLEN-VRPDSFTLVSVIPAVADISDPLQAR 342
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG + + L DV+V ALI MY KC V +LF+ +R++++WN++I G+ +G
Sbjct: 343 WIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHG 402
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F + +L +M G G +P+ T ++VL
Sbjct: 403 FGQAAVELFEEMKGT--GSLPNETTFLSVL 430
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%)
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
TF ++K C AD+ G VH GL + S AL MY KC + ++F+ M
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
P R+ V+WN+++ G++ NG + + +++M G E G PD +T+V+VLP
Sbjct: 78 PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLP 127
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 123/231 (53%), Gaps = 6/231 (2%)
Query: 82 KALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
+AL L QE + + G + AC + + G+++H S + +S D I L
Sbjct: 499 EALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQ-SYISGYSEDLSIGNAL 557
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
+++Y+ CG D+ F+ + ++ WNAL+SGF ++ + L +F +++ ++ +
Sbjct: 558 VSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQ-AGVEAN 616
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
FTF + A A++ G +H M K G + SN LI +Y KC +E+ + F
Sbjct: 617 LFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFF 676
Query: 260 VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
MPE+N+VSWN++I G+S++G+ E+ L +M + G +P+ +T V VL
Sbjct: 677 EMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMK--QLGLMPNHVTFVGVL 725
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 107/191 (56%), Gaps = 4/191 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+ C +++G+++H +++ + QF + + + LI MY+ G +R + L+
Sbjct: 421 ILRTCTSLGALDLGEQIHTQVIKSGFQF--NVYVCSVLIDMYAKHGELDTARGILQRLRE 478
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ W A+++G+T+++L+ + L +F E+ + ++ DN F I AC GI + G
Sbjct: 479 EDVVSWTAMIAGYTQHDLFAEALKLFQEMENQG-IRSDNIGFSSAISACAGIQALNQGQQ 537
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H + G D+ + NAL+++Y +C ++ FE + ++ +SWN++I GF+++G
Sbjct: 538 IHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGH 597
Query: 282 SCESFDLLIKM 292
E+ + +M
Sbjct: 598 CEEALQVFSQM 608
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 7/210 (3%)
Query: 103 LLQAC-GHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+AC G + ++ +++H + S+ + N LI +YS G ++ VF+ L
Sbjct: 117 VLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNP-LIDLYSKNGHVDLAKLVFERLFL 175
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ W A++SG ++N + + +F ++ + P + F V+ AC I G
Sbjct: 176 KDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVI-PTPYVFSSVLSACTKIELFKLGEQ 234
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG K GL + FV NAL+ +Y + + ++F M R+ +S+NS+I G ++ GF
Sbjct: 235 LHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGF 294
Query: 282 SCESFDLLIKM-MGCEEGFIPDVITVVTVL 310
S + L KM + C + PD +TV ++L
Sbjct: 295 SDRALQLFEKMQLDCMK---PDCVTVASLL 321
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 103/208 (49%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + ++G+++H + S F+ N L+T+YS G + + ++F + R
Sbjct: 219 VLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNA-LVTLYSRWGNLIAAEQIFSKMHRR 277
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ +N+L+SG + L +F ++ D +KPD T ++ AC + G +
Sbjct: 278 DRISYNSLISGLAQRGFSDRALQLFEKMQLDC-MKPDCVTVASLLSACASVGAGYKGKQL 336
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H KMG+ D+ + +L+ +Y KC +E + F N+V WN ++ + + G
Sbjct: 337 HSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNL 396
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
ES+ + ++M EG +P+ T ++L
Sbjct: 397 SESYWIFLQMQ--IEGLMPNQYTYPSIL 422
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 93/190 (48%), Gaps = 2/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC GK++H V S+D II L+ +Y C + F + +T
Sbjct: 320 LLSACASVGAGYKGKQLHSYV-IKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETE 378
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN ++ + + ++ IF+++ + L P+ +T+P +++ C + + G +
Sbjct: 379 NVVLWNVMLVAYGQLGNLSESYWIFLQMQIEG-LMPNQYTYPSILRTCTSLGALDLGEQI 437
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G +V+V + LI MY K ++ + + + E ++VSW ++I G++++
Sbjct: 438 HTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLF 497
Query: 283 CESFDLLIKM 292
E+ L +M
Sbjct: 498 AEALKLFQEM 507
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 3/191 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L + C + + K++H + S F + ++ +RLI +Y G ++ ++FD + +
Sbjct: 16 LFEGCFNSGSLLDAKKLHARIFKSG-FDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSS 74
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC-GGIADVGFGSG 221
N+ WN ++SG +L + VL +F + ++ + PD TF V++AC GG A
Sbjct: 75 NVSFWNKVISGLLAKKLASQVLGLFSLMITEN-VTPDESTFASVLRACSGGKAPFQVTEQ 133
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H G V N LI +Y K V+ +FE + ++ VSW ++I G S+NG
Sbjct: 134 IHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGR 193
Query: 282 SCESFDLLIKM 292
E+ L +M
Sbjct: 194 EDEAILLFCQM 204
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K G G+ + + LI +Y V+ +KLF+ +P N+ WN +I G
Sbjct: 32 LHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKL 91
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + L M+ E PD T +VL
Sbjct: 92 ASQVLGLFSLMI--TENVTPDESTFASVL 118
>gi|302809659|ref|XP_002986522.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
gi|300145705|gb|EFJ12379.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
Length = 625
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 118/209 (56%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + +E+GK VH VS S +F +D + LI MYS CG +RRVFD +++
Sbjct: 111 ILGACSAMELLELGKEVHARVSRS-RFKSDPALAAALINMYSKCGVLESARRVFDGIQSV 169
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA++SG ++ + L +F + +++ ++ D ++ ++ AC + D+ G +
Sbjct: 170 DPSPWNAMISGLVQHGRAREALGLFERMKAES-VRIDKVSYLTILSACCALEDLHEGIRI 228
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSENGF 281
H A+ G+ D+ V A+ MY KC V+ K+F+ M E+ N+VSWNS+I ++++G
Sbjct: 229 HEHASACGMDKDLVVETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSWNSMIAAYAQSGR 288
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L M EEG PD IT L
Sbjct: 289 GREALELYELMK--EEGVQPDDITYAGAL 315
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 111/210 (52%), Gaps = 5/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +D+ G R+HE SA D ++ T + MYS C +R++FD + +
Sbjct: 212 ILSACCALEDLHEGIRIHEHASA-CGMDKDLVVETAVFNMYSKCRQVDLARKMFDGMNEK 270
Query: 163 -NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
N+ WN++++ + ++ + L ++ EL + ++PD+ T+ + AC G+
Sbjct: 271 TNVVSWNSMIAAYAQSGRGREALELY-ELMKEEGVQPDDITYAGALGACTSYGGSAKGAE 329
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H + + DVF+ A++ MY KC +E + FE M +N V+W++++ F + G+
Sbjct: 330 IHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQQGY 389
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ DL ++M+ EGF P IT+ L
Sbjct: 390 DREALDLYLRMV--SEGFQPSEITLAGALA 417
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 102/186 (54%), Gaps = 6/186 (3%)
Query: 125 ASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVL 184
A++ F ++ ++ L++ Y+ G +R+VFDS++ ++L WN++V ++++ ++L
Sbjct: 34 AASDFHSNVVVKNSLVSAYTRSGDLRSARKVFDSIENKDLISWNSMVVAYSQHGHGEEML 93
Query: 185 SIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAM 244
+F ++ +++PD+ T+ ++ AC + + G VH ++ D ++ ALI M
Sbjct: 94 ELFRKM----DVEPDSITYASILGACSAMELLELGKEVHARVSRSRFKSDPALAAALINM 149
Query: 245 YGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVI 304
Y KC +E ++F+ + + WN++I G ++G + E+ L +M E D +
Sbjct: 150 YSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQHGRAREALGLFERMKA--ESVRIDKV 207
Query: 305 TVVTVL 310
+ +T+L
Sbjct: 208 SYLTIL 213
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 9/213 (4%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A G G K EI R+ E ++ D ++T ++ MY+ CG + F+
Sbjct: 314 ALGACTSYGGSAKGAEIHSRITE-----SKIRTDVFLDTAIVNMYAKCGELETAMSYFEK 368
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
++ +N W+A+V F + + L +++ + S+ +P T + AC I +
Sbjct: 369 MRRKNAVTWSAMVGAFIQQGYDREALDLYLRMVSEG-FQPSEITLAGALAACSRIGALQE 427
Query: 219 GSGVHG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G +H + A L +F+ N+L+ MY KC + +F + R+ SWN+II G +
Sbjct: 428 GKAIHSRIQATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHA 487
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+G E L +M+ ++G PD +T VL
Sbjct: 488 HHGDVDEVLSLHGEMV--QDGVDPDYVTFACVL 518
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 5/144 (3%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
+ ++L+ L ++ E +++ A L AC ++ GK +H + A+ N +
Sbjct: 390 DREALDLYLRMVSEGFQPSEITLAGA--LAACSRIGALQEGKAIHSRIQATETLQNCLFL 447
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
L+ MY+ CG + +F +L+ R+ F WN ++ G + +VLS+ E+ D
Sbjct: 448 QNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDG- 506
Query: 196 LKPDNFTFPCVIKAC--GGIADVG 217
+ PD TF CV+ AC G+ D G
Sbjct: 507 VDPDYVTFACVLLACSHAGLLDRG 530
>gi|297842491|ref|XP_002889127.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334968|gb|EFH65386.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 466
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 115/211 (54%), Gaps = 6/211 (2%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++++A D +GK++H V+ F D + IT+Y G ++R VFD
Sbjct: 121 IVIKAAVQIHDFPLGKQLHS-VAVRLGFVGDEFCESGFITLYCKAGELENARNVFDENPE 179
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R L WNA++ G + + +F+E+ + +PD+FT V ACGG+ D+
Sbjct: 180 RKLGSWNAIIGGLNHAGRANEAVEMFMEMRR-SGFEPDDFTMVSVTSACGGLGDLNLAFQ 238
Query: 222 VHG--MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H + AK DV + N+LI MYGKC ++ +++FE MP+RN+VSW+S+I G++ N
Sbjct: 239 LHKCVLQAKTEEKSDVMMMNSLIDMYGKCGRMDFAIQVFEEMPQRNVVSWSSMITGYAAN 298
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + E+ + +M E G P+ IT V VL
Sbjct: 299 GNTLEALECFRQMR--EFGVRPNKITFVGVL 327
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
F WN ++ + +++ D + +++ + L PD +T P VIKA I D G +H
Sbjct: 82 FLWNNIMRSYIRHDSPLDSVQVYLGMVRSNVL-PDRYTLPIVIKAAVQIHDFPLGKQLHS 140
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCE 284
+A ++G +GD F + I +Y K +E +F+ PER L SWN+II G + G + E
Sbjct: 141 VAVRLGFVGDEFCESGFITLYCKAGELENARNVFDENPERKLGSWNAIIGGLNHAGRANE 200
Query: 285 SFDLLIKMMGCEEGFIPDVITVVTV 309
+ ++ ++M GF PD T+V+V
Sbjct: 201 AVEMFMEMR--RSGFEPDDFTMVSV 223
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 105/194 (54%), Gaps = 4/194 (2%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
++VH S N I+ +L+ YS D+ +FD + R+ W+ +V GF K
Sbjct: 755 RQVHXQASVHGMLQN-LIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAK 813
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF 236
Y + F EL +PDN+T P VI+AC + ++ G +H + K GL D F
Sbjct: 814 VGDYMNCFGTFRELIR-CGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHF 872
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCE 296
V AL+ MYGKC +E+ LF+ M ER+LV+W +I G++E G + ES L KM E
Sbjct: 873 VCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMR--E 930
Query: 297 EGFIPDVITVVTVL 310
EG +PD + +VTV+
Sbjct: 931 EGVVPDKVAMVTVV 944
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 104/194 (53%), Gaps = 4/194 (2%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
++VH S N ++ +LI YS D+ +FD + R+ W+ +V GF K
Sbjct: 79 RQVHAQASVHGMLEN-IVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAK 137
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF 236
Y + F EL +PDN+T P VI+AC + ++ G +H + K GL D F
Sbjct: 138 VGDYINCFGTFRELIR-CGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHF 196
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCE 296
V AL+ MY KC +E+ LF+ M ER+LV+W +I G++E G + ES L KM E
Sbjct: 197 VCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMR--E 254
Query: 297 EGFIPDVITVVTVL 310
EG +PD + +VTV+
Sbjct: 255 EGVVPDKVAMVTVV 268
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC K++++G+ +H +V D + L+ MY C D+R +FD ++ R
Sbjct: 166 VIRACRDLKNLQMGRLIHHIVY-KFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQER 224
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L W ++ G+ + + L +F ++ + + PD V+ AC + + +
Sbjct: 225 DLVTWTVMIGGYAECGKANESLVLFEKMREEG-VVPDKVAMVTVVFACAKLGAMHKARII 283
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ DV + A+I MY KC VE ++F+ M E+N++SW+++I + +G
Sbjct: 284 DDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQG 343
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ DL M+ G +PD IT+ ++L
Sbjct: 344 RKALDLFPMML--SSGMLPDKITLASLL 369
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC K++++G+ +H +V D + L+ MY C D+R +FD + R
Sbjct: 842 VIRACRDLKNLQMGRLIHHIVY-KFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXER 900
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L W ++ G+ + + L +F ++ + + PD V+ AC + + +
Sbjct: 901 DLVTWTVMIGGYAECGNANESLVLFDKMREEG-VVPDKVAMVTVVFACAKLGAMHKARTI 959
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ DV + A+I M+ KC VE ++F+ M E+N++SW+++I + +G
Sbjct: 960 DDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQG 1019
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ DL M+ G +P+ IT+V++L
Sbjct: 1020 RKALDLFPMML--RSGILPNKITLVSLL 1045
>gi|302819906|ref|XP_002991622.1| hypothetical protein SELMODRAFT_451234 [Selaginella moellendorffii]
gi|300140655|gb|EFJ07376.1| hypothetical protein SELMODRAFT_451234 [Selaginella moellendorffii]
Length = 459
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 110/197 (55%), Gaps = 6/197 (3%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+ VH + S F D ++ T L+ MY+ CG + +R FD+L ++N+ WNA+++G+
Sbjct: 158 GRTVHRQI-ISRGFEGDTVVGTALVNMYARCGDVVTARTNFDNLCSKNIVSWNAMIAGYV 216
Query: 176 KNELYTDVLSIFVELSSDTELKP--DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
+ + L ++ ++ D E KP D TF V+ AC + ++ G +H A G
Sbjct: 217 QAGSSQEALLLYEKMQQD-EAKPKADGLTFASVLAACSNLGEISRGRELHYDVAASGFAE 275
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
D+ V NAL+ MYGKC + E +FE + R+++SW S++ ++ +G E+ +L+ +M
Sbjct: 276 DLIVQNALVDMYGKCGNLVESRNVFEGIKSRSVISWTSMVTAYARHGHGAEAVELVWRM- 334
Query: 294 GCEEGFIPDVITVVTVL 310
EG D +T+ ++L
Sbjct: 335 -SLEGVEADDVTLTSIL 350
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 2/208 (0%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + +E G+ +H + S + N L+TMY+ CG D++ VF R+
Sbjct: 45 LTACASLEALEEGREIHRKTVEAGLESVTMVRNA-LVTMYARCGSLEDAQGVFTGTVDRD 103
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W+AL++ ++ + + ++ ++ + ++ D FTF ++ A + G VH
Sbjct: 104 VVSWSALIAAHAQHGQDLEAIKVYRRMNLEG-IEADVFTFASILSAVSSPGLLPEGRTVH 162
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G GD V AL+ MY +C V F+ + +N+VSWN++I G+ + G S
Sbjct: 163 RQIISRGFEGDTVVGTALVNMYARCGDVVTARTNFDNLCSKNIVSWNAMIAGYVQAGSSQ 222
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ L KM E D +T +VL
Sbjct: 223 EALLLYEKMQQDEAKPKADGLTFASVLA 250
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ R++ WNA++ +E + + LS+F + ++KPD TF + AC + +
Sbjct: 1 MDRRDIVSWNAVLGAQVLHEQFREALSLFKSM----KMKPDAITFATALTACASLEALEE 56
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G +H + GL V NAL+ MY +C +E+ +F +R++VSW+++I ++
Sbjct: 57 GREIHRKTVEAGLESVTMVRNALVTMYARCGSLEDAQGVFTGTVDRDVVSWSALIAAHAQ 116
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+G E+ + +M EG DV T ++L
Sbjct: 117 HGQDLEAIKVYRRM--NLEGIEADVFTFASIL 146
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 8/210 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C + + GK VH + +D + T LI MY+ CG +RRVFD++K R
Sbjct: 265 ILDGCWTPEALAWGKAVHAQ-CMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVR 323
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W ++ G+ +N D +F + + ++PD T+ ++ AC A++ +
Sbjct: 324 DVVSWTVMIEGYAENGNIEDAFGLFATMQEEG-IQPDRITYMHIMNACAISANLNHAREI 382
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G D+ VS AL+ MY KC +++ ++F+ MP R++VSW+++I + ENG+
Sbjct: 383 HSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYG 442
Query: 283 CESFDL--LIKMMGCEEGFIPDVITVVTVL 310
E+F+ L+K E PD +T + +L
Sbjct: 443 TEAFETFHLMKRSNIE----PDGVTYINLL 468
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 109/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + GK VH V + F +DF I T L++MY G D+R+VFD L R
Sbjct: 164 VLDACSSPAGLNWGKEVHAQV-VTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIR 222
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ +N +V G+ K+ + +F + LKP+ +F ++ C + +G V
Sbjct: 223 DVSTFNVMVGGYAKSGDWEKAFELFYRMQQ-VGLKPNKISFLSILDGCWTPEALAWGKAV 281
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H GL+ D+ V+ +LI MY C +E ++F+ M R++VSW +I G++ENG
Sbjct: 282 HAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNI 341
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F L M EEG PD IT + ++
Sbjct: 342 EDAFGLFATMQ--EEGIQPDRITYMHIM 367
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC ++ + +H V + F D +++T L+ MY+ CG D+R+VFD++ R
Sbjct: 366 IMNACAISANLNHAREIHSQVDIAG-FGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRR 424
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+A++ + +N T+ F L + ++PD T+ ++ ACG + + G +
Sbjct: 425 DVVSWSAMIGAYVENGYGTEAFETF-HLMKRSNIEPDGVTYINLLNACGHLGALDVGMEI 483
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ A K L+ V + NALI M K VE +F+ M R++++WN++I G+S +G +
Sbjct: 484 YTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNA 543
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M+ +E F P+ +T V VL
Sbjct: 544 REALYLFDRML--KERFRPNSVTFVGVL 569
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 127/230 (55%), Gaps = 5/230 (2%)
Query: 81 NKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLI 140
N L L E ++ D + L Q C +D +GK+V + + + N + +NT LI
Sbjct: 42 NDVLQRLGEGGNHIDSRTYVK-LFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNT-LI 99
Query: 141 TMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDN 200
+YS+CG ++R++FDS++ + + WNAL++G+ + + ++F ++ D L+P
Sbjct: 100 KLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMV-DEGLEPSI 158
Query: 201 FTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV 260
TF V+ AC A + +G VH G + D + AL++MY K +++ ++F+
Sbjct: 159 ITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDG 218
Query: 261 MPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ R++ ++N ++ G++++G ++F+L +M + G P+ I+ +++L
Sbjct: 219 LHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQ--QVGLKPNKISFLSIL 266
>gi|255546193|ref|XP_002514156.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546612|gb|EEF48110.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 885
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 117/208 (56%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L++C ++ GK+VH + ++ NDF+ T LI MY+ D+ F+ L R
Sbjct: 503 VLRSCSSLLNVWFGKQVHAHIIKNSLDGNDFV-GTALIDMYAKNRCLEDADVAFNKLTNR 561
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+LF W +++G ++ + + ++ + +KP+ FT + C +A +G G +
Sbjct: 562 DLFTWTVIIAGHSQTDKAEKAVKYLGQMLREG-IKPNEFTLASCLSGCSRMATLGNGQQL 620
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A K G GDVFVS+AL+ MYGKC +E+ +F+ + R+ V+WN+IICG+S++G
Sbjct: 621 HSLAIKSGHSGDVFVSSALVDMYGKCGCMEDAEAIFKGLFSRDTVAWNTIICGYSQHGQG 680
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ + M+ +E PD +T + VL
Sbjct: 681 QKALEAFRMML--DEDIDPDEVTFIGVL 706
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 111/209 (53%), Gaps = 4/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+ C + ++ GK +H L S + D + L+ MYS CG ++ +VF+ ++
Sbjct: 300 TVLKGCANSGNLREGKALHSL-SIRRAYELDEFLGCNLVDMYSKCGMAYEALKVFNMIEE 358
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ W+A+++G + + +F L ++P+ F+F VI A + D+ G
Sbjct: 359 PDIVAWSAIITGLDQQGHSQEAAELF-HLMRQKGVRPNQFSFASVISAATNVGDLYLGQS 417
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K G D V NALI MY K FV++ +++F+ M R+LVSWN+++ GF +
Sbjct: 418 IHCCICKYGYESDNSVGNALITMYMKSGFVQDGIRVFDTMTNRDLVSWNALLSGFYDFET 477
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S + + +M+ EG +P++ T V VL
Sbjct: 478 SDQGLRIFCQML--MEGLVPNLYTFVGVL 504
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 108/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ A + D+ +G+ +H + + +D + LITMY GF D RVFD++ R
Sbjct: 402 VISAATNVGDLYLGQSIHCCI-CKYGYESDNSVGNALITMYMKSGFVQDGIRVFDTMTNR 460
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WNAL+SGF E L IF ++ + L P+ +TF V+++C + +V FG V
Sbjct: 461 DLVSWNALLSGFYDFETSDQGLRIFCQMLMEG-LVPNLYTFVGVLRSCSSLLNVWFGKQV 519
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K L G+ FV ALI MY K +E+ F + R+L +W II G S+ +
Sbjct: 520 HAHIIKNSLDGNDFVGTALIDMYAKNRCLEDADVAFNKLTNRDLFTWTVIIAGHSQTDKA 579
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M+ EG P+ T+ + L
Sbjct: 580 EKAVKYLGQML--REGIKPNEFTLASCL 605
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 112/212 (52%), Gaps = 3/212 (1%)
Query: 96 LKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV 155
LK +G +L+ C + ++ G +H V S D + LI +Y+ CG +R+V
Sbjct: 93 LKRYSG-MLRECASKGNLNEGTAIHGNVIKSG-LEPDSHLWVSLINLYAKCGSLAFARKV 150
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
++ R++ W AL++G+ +D + + E+ + + P+ FT V+KA +D
Sbjct: 151 LVGMRERDVVSWTALIAGYVSEGCGSDGVKAYCEMRKEN-ICPNEFTLATVLKASSMCSD 209
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
+ FG +H A K GL+ D+FV +AL+ +Y K +E ++F MPE+N VSWN+++ G
Sbjct: 210 IKFGKLIHLEAIKTGLLLDLFVGSALVDLYAKFGEMELADRVFFGMPEKNNVSWNALLNG 269
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
+++ G L +M+ CE F ++ V
Sbjct: 270 YAQRGDGKNVLKLFCRMLECEMNFTNYTLSTV 301
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 115/225 (51%), Gaps = 6/225 (2%)
Query: 86 LLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSL 145
+ +EN+ + AT +L+A DI+ GK +H L + T D + + L+ +Y+
Sbjct: 185 MRKENICPNEFTLAT--VLKASSMCSDIKFGKLIH-LEAIKTGLLLDLFVGSALVDLYAK 241
Query: 146 CGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPC 205
G + RVF + +N WNAL++G+ + +VL +F + + E+ N+T
Sbjct: 242 FGEMELADRVFFGMPEKNNVSWNALLNGYAQRGDGKNVLKLFCRML-ECEMNFTNYTLST 300
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
V+K C ++ G +H ++ + D F+ L+ MY KC E +K+F ++ E +
Sbjct: 301 VLKGCANSGNLREGKALHSLSIRRAYELDEFLGCNLVDMYSKCGMAYEALKVFNMIEEPD 360
Query: 266 LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+V+W++II G + G S E+ +L M ++G P+ + +V+
Sbjct: 361 IVAWSAIITGLDQQGHSQEAAELFHLMR--QKGVRPNQFSFASVI 403
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L C + G+++H L S S D +++ L+ MY CG D+ +F L +R+
Sbjct: 605 LSGCSRMATLGNGQQLHSLAIKSGH-SGDVFVSSALVDMYGKCGCMEDAEAIFKGLFSRD 663
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
WN ++ G++++ L F + D ++ PD TF V+ AC
Sbjct: 664 TVAWNTIICGYSQHGQGQKALEAF-RMMLDEDIDPDEVTFIGVLAAC 709
>gi|302759917|ref|XP_002963381.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
gi|300168649|gb|EFJ35252.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
Length = 860
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 113/212 (53%), Gaps = 9/212 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSAST-QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L AC D+E GK +H + S+ Q D I+ L+TMY CG D+ RVF ++
Sbjct: 134 VLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRR 193
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N F W A+++ + +N + +F ++ S+ ++PD T+ V+ AC + D+ G
Sbjct: 194 KNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMR 253
Query: 222 VHGMAAK---MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
+H + + +GL D + + +++++ +C + ++F+ MP R +V+W ++I +++
Sbjct: 254 IHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQ 313
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G+S E+ +L M PD I + VL
Sbjct: 314 RGYSMEALELYHCM-----DIEPDDIALSNVL 340
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 122/235 (51%), Gaps = 12/235 (5%)
Query: 81 NKALSLLQE-NLHNADLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
+AL L +E + D + T +L AC KD+E GK+VH + S D ++
Sbjct: 12 REALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESVA-RVDTVLQNA 70
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+ +Y+ CG +SRR+F++++ R + WN +++ + +++ + + L F + + P
Sbjct: 71 LLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAFRRMDA----PP 126
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGM--AAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
+ TF V+ AC D+ G +H + + D + N+L+ MYGKC +E+ +
Sbjct: 127 SSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGKCGSLEDAER 186
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI-PDVITVVTVL 310
+F + +N SW ++I +++NG+ + ++ MM EG + PD IT VL
Sbjct: 187 VFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMS--EGRVEPDPITYAGVL 239
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 106/199 (53%), Gaps = 4/199 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQAC K++E G+ VH + AS F ++ T L+ MY CG ++RR FD K R
Sbjct: 339 VLQACSRLKNLEQGRAVHSRI-ASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKAR 397
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +L++ ++ + L +F + + ++P++ TF VI AC ++ + G +
Sbjct: 398 DVISWTSLITAYSHENFGREALEVFHSMELEG-VEPNSITFCTVIDACSRLSSLLPGRAL 456
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G I D FV NAL++MY K V+ +F+ +P + SW ++ ++NG S
Sbjct: 457 HSRVVATGHISDEFVGNALVSMYSKFGRVDFARMVFDSIPVKRYPSWRVMLVALTQNGHS 516
Query: 283 CESFDLLIKMMGCEEGFIP 301
E+ ++ ++ EGF P
Sbjct: 517 HEALEMYSRIH--LEGFRP 533
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 101/198 (51%), Gaps = 3/198 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC + G+ +H V A+ S++F+ N L++MYS G +R VFDS+ +
Sbjct: 440 VIDACSRLSSLLPGRALHSRVVATGHISDEFVGNA-LVSMYSKFGRVDFARMVFDSIPVK 498
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
W ++ T+N + L ++ + + +P + F + +C + DV +
Sbjct: 499 RYPSWRVMLVALTQNGHSHEALEMYSRIHLEG-FRPGSPIFSAALVSCTALEDVSRARAI 557
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ D+ +SN L+ +Y KC +E+ +F+ M E+N VSW ++I G+++NG
Sbjct: 558 HGVIKSSDFYPDLVLSNVLMNVYAKCGELEKARLVFDQMTEKNEVSWTTMIGGYAQNGRP 617
Query: 283 CESFDLLIKMMGCEEGFI 300
E+ +L K M + FI
Sbjct: 618 AEALELY-KAMDVQPNFI 634
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 132/294 (44%), Gaps = 16/294 (5%)
Query: 24 SQPQFPATVIQRNKHSLRSIFKEKSSLSLSAKTNNA--STQGLHFLQEITTLCE---ESK 78
S PQ A I +N SL +++ + SL + + + + IT + E +
Sbjct: 157 SSPQIQADEILQN--SLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERR 214
Query: 79 SLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSA--STQFSNDFIIN 136
++ ++ E D GVL AC D+E G R+H L+ + D ++
Sbjct: 215 AIEVFGDMMSEGRVEPDPITYAGVL-TACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQ 273
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
++++++ CG + +R +FD + R + W +++ + + + L EL ++
Sbjct: 274 DGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEAL----ELYHCMDI 329
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
+PD+ V++AC + ++ G VH A + V L+ MY KC + E +
Sbjct: 330 EPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARR 389
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ R+++SW S+I +S F E+ ++ M EG P+ IT TV+
Sbjct: 390 TFDGFKARDVISWTSLITAYSHENFGREALEVFHSME--LEGVEPNSITFCTVI 441
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 102/207 (49%), Gaps = 7/207 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L +C +D+ + +H ++ S+ F D +++ L+ +Y+ CG +R VFD + +N
Sbjct: 542 LVSCTALEDVSRARAIHGVIK-SSDFYPDLVLSNVLMNVYAKCGELEKARLVFDQMTEKN 600
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
W ++ G+ +N + L EL +++P+ F VI +C + + G VH
Sbjct: 601 EVSWTTMIGGYAQNGRPAEAL----ELYKAMDVQPNFIAFVPVISSCADLGALVEGQRVH 656
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ GL + + AL+ MY KC + + F+ + +WNS+ +++ G
Sbjct: 657 ARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQFGHGS 716
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L +M C +G P+ IT+++VL
Sbjct: 717 QVLELYREM--CLQGVQPNGITLLSVL 741
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 6/141 (4%)
Query: 170 LVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM 229
++S + + + + L ++ E+ + + P++ TF CV+ AC G+ D+ G VH +
Sbjct: 1 MISAYAQKGYHREALELYEEMD-ERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRES 59
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL 289
D + NAL+ +Y KC +EE ++FE M R + +WN++I + ++ F E+ +
Sbjct: 60 VARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAF 119
Query: 290 IKMMGCEEGFIPDVITVVTVL 310
+M P IT +VL
Sbjct: 120 RRMDA-----PPSSITFTSVL 135
>gi|302803540|ref|XP_002983523.1| hypothetical protein SELMODRAFT_118230 [Selaginella moellendorffii]
gi|300148766|gb|EFJ15424.1| hypothetical protein SELMODRAFT_118230 [Selaginella moellendorffii]
Length = 506
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 111/209 (53%), Gaps = 9/209 (4%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L AC + +E GK VH ++V A QF D L+ MY+ CG ++R VFD +K
Sbjct: 66 VLAACSAVEALEQGKEVHRQMVDAGFQF--DAAAENSLVNMYAKCGSITEAREVFDGMKQ 123
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R + W ++S + + + L ++ ++ S+ ++P+ TF V+ AC + + G
Sbjct: 124 RTVVSWTGIISAYVRKGHPREALDLYRKMGSEG-VEPNGITFASVLSACSSLGALEEGKA 182
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH G D+ V+NAL+++YGKC V+ K+F+ M RN+VSW ++I ++ +
Sbjct: 183 VHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRMKIRNVVSWTAMISSYAHHRH 242
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S E+ L M P+ +T+ +VL
Sbjct: 243 SEEAIQLYKAM-----DVAPNAVTLASVL 266
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 98/192 (51%), Gaps = 7/192 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E GK VH + A+ + D + L+++Y CG +R+VFD +K R
Sbjct: 167 VLSACSSLGALEEGKAVHAQMKAAG-YKPDLAVANALVSLYGKCGSVDSARKVFDRMKIR 225
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A++S + + + + ++ + ++ P+ T V+ AC + + G V
Sbjct: 226 NVVSWTAMISSYAHHRHSEEAIQLYKAM----DVAPNAVTLASVLSACASLGNAEEGRAV 281
Query: 223 HGMAAKM--GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H A GL D + NAL+ MY KC + K+F+ M R+ +SW+++I ++++G
Sbjct: 282 HEKLASTTTGLATDEVLQNALLNMYAKCGDGDAARKIFDAMAVRDTMSWSTLIAAYTQHG 341
Query: 281 FSCESFDLLIKM 292
E+ ++ M
Sbjct: 342 RGGEAVEMCRSM 353
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 3/170 (1%)
Query: 142 MYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL-SSDTELKPDN 200
M++ CG +SR VFD + +++ WN+++ ++++ + + +F + SS ++P+
Sbjct: 1 MFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPNA 60
Query: 201 FTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV 260
T+ V+ AC + + G VH G D N+L+ MY KC + E ++F+
Sbjct: 61 ITYTTVLAACSAVEALEQGKEVHRQMVDAGFQFDAAAENSLVNMYAKCGSITEAREVFDG 120
Query: 261 MPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
M +R +VSW II + G E+ DL KM EG P+ IT +VL
Sbjct: 121 MKQRTVVSWTGIISAYVRKGHPREALDLYRKM--GSEGVEPNGITFASVL 168
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 124/230 (53%), Gaps = 9/230 (3%)
Query: 83 ALSLLQE-NLHNADLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLI 140
+LSL +E L A LK +T V L+ GH + + +H S + F + ++T L
Sbjct: 306 SLSLFKELMLSGAKLKSSTLVSLVPVSGH---LMLIYAIHGY-SLKSNFLSHTSVSTALT 361
Query: 141 TMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDN 200
T+YS +R++FD ++L WNA++SG+T+N L D +S+F E+ ++E P+
Sbjct: 362 TVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ-NSEFSPNP 420
Query: 201 FTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV 260
T C++ AC + + G VH + ++VS ALI MY KC + E +LF+
Sbjct: 421 VTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDF 480
Query: 261 MPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
MP++N V+WN++I G+ +G E+ + +M+ G P +T + VL
Sbjct: 481 MPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLN--SGIAPTPVTFLCVL 528
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 96/183 (52%), Gaps = 1/183 (0%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F ND + T+L S G +R +F S++ ++F +N L+ GF+ NE L++F
Sbjct: 48 FRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVFA 107
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
L T+LKP++ T+ I A G D G +HG A G ++ + + ++ MY K
Sbjct: 108 HLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKF 167
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
VE+ K+F+ MPE++ + WN++I G+ +N ES + ++ E D T++
Sbjct: 168 WRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLIN-ESCTRLDTTTLLD 226
Query: 309 VLP 311
+LP
Sbjct: 227 ILP 229
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 111/209 (53%), Gaps = 9/209 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L A +++ +G ++H L + + +S+D+++ T I++YS CG + +F +
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVL-TGFISLYSKCGKIKMASTLFREFRRP 285
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELS-SDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ +NA++ G+T N LS+F EL S +LK T ++ G + +
Sbjct: 286 DIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSS--TLVSLVPVSGHLMLI---YA 340
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG + K + VS AL +Y K +E KLF+ PE++L SWN++I G+++NG
Sbjct: 341 IHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGL 400
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ L +M E F P+ +T+ +L
Sbjct: 401 TEDAISLFREMQNSE--FSPNPVTITCIL 427
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 88/163 (53%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
++ ++ + ++ MY D+R+VFD + ++ WN ++SG+ KNE+Y + + +F +L
Sbjct: 152 SELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL 211
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
+++ + D T ++ A + ++ G +H +A K G +V I++Y KC
Sbjct: 212 INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
++ LF ++V++N++I G++ NG + S L ++M
Sbjct: 272 IKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELM 314
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 115/200 (57%), Gaps = 6/200 (3%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
+I + K++H L+ + + D ++ T+L+T+Y+ G S F ++ +N+F WN++V
Sbjct: 63 NINVAKQLHALLLVLGK-AQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMV 121
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
S + + Y D + EL S + ++PD +TFP V+KAC +AD G +H KMG
Sbjct: 122 SAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLKMGF 178
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
DV+V+ +LI +Y + VE K+F MP R++ SWN++I GF +NG E+ +L +
Sbjct: 179 EHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDR 238
Query: 292 MMGCEEGFIPDVITVVTVLP 311
M E D +TV ++LP
Sbjct: 239 MK--TEEVKMDTVTVSSMLP 256
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 111/212 (52%), Gaps = 8/212 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C D+ G VH L +D ++ LI MYS G D++RVFD ++ R
Sbjct: 254 MLPICAQSNDVVGGVLVH-LYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVR 312
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN++++ + +N+ L F E+ ++PD T + G ++D G V
Sbjct: 313 DLVSWNSIIAAYEQNDDPVTALGFFKEMLF-VGMRPDLLTVVSLASIFGQLSDRRIGRAV 371
Query: 223 HGMAAK-MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
HG + L D+ + NAL+ MY K ++ +FE +P R+++SWN++I G+++NG
Sbjct: 372 HGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGL 431
Query: 282 SCESFDLLIKMMGCEEG--FIPDVITVVTVLP 311
+ E+ D M EEG +P+ T V++LP
Sbjct: 432 ASEAIDAYNMM---EEGRTIVPNQGTWVSILP 460
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 2/203 (0%)
Query: 108 GHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQW 167
G D IG+ VH V D +I L+ MY+ G +R VF+ L +R++ W
Sbjct: 360 GQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISW 419
Query: 168 NALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAA 227
N L++G+ +N L ++ + + + + P+ T+ ++ A + + G +HG
Sbjct: 420 NTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLI 479
Query: 228 KMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFD 287
K L DVFV+ LI MYGKC +E+ + LF +P+ V WN+II +G ++
Sbjct: 480 KNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQ 539
Query: 288 LLIKMMGCEEGFIPDVITVVTVL 310
L M +G D IT V++L
Sbjct: 540 LFKDMRA--DGVKADHITFVSLL 560
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 109/207 (52%), Gaps = 7/207 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC D G+++H V F +D + LI +YS G + +VF + R
Sbjct: 156 VLKACLSLAD---GEKMHCWV-LKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVR 211
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA++SGF +N + L + + ++ E+K D T ++ C DV G V
Sbjct: 212 DVGSWNAMISGFCQNGNVAEALRVLDRMKTE-EVKMDTVTVSSMLPICAQSNDVVGGVLV 270
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K GL DVFVSNALI MY K +++ ++F+ M R+LVSWNSII + +N
Sbjct: 271 HLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDP 330
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTV 309
+ +M+ G PD++TVV++
Sbjct: 331 VTALGFFKEMLFV--GMRPDLLTVVSL 355
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 109/194 (56%), Gaps = 3/194 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC ++ G+ VH V + L+ +Y+ G D +VF+++K +
Sbjct: 308 VLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEK 367
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN L+S FT+N + L +FV++ + L PD+++ + ACG I+ G+ +
Sbjct: 368 TILSWNTLISIFTRNGQPEEALLLFVQMQTQG-LMPDSYSLASSLSACGTISFSQLGAQI 426
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K G D FV NALI MY KC FV K+FE + E++LV+WNS+ICGFS+NG+S
Sbjct: 427 HGYIIKTGNFND-FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYS 485
Query: 283 CESFDLLIKM-MGC 295
E+ L +M M C
Sbjct: 486 VEAITLFDQMYMNC 499
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
+T+LI Y+ G S+RVFD+ + F W L+ + + + +S++ E+ +
Sbjct: 36 STKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQ 95
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
+ NF FP V+KAC G D+ G VHG K G D V +L+ MYG+ + +++
Sbjct: 96 TQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDAC 155
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
K F+ MP R++V+W+SI+ F +NG + E D+ +M+ E PD +T+++V
Sbjct: 156 KAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMI--SEAVEPDSVTMLSV 207
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 112/204 (54%), Gaps = 5/204 (2%)
Query: 107 CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQ 166
CG ++G ++H + + F NDF+ N LI MY+ CGF + ++F+ +K ++L
Sbjct: 414 CGTISFSQLGAQIHGYIIKTGNF-NDFVQNA-LIDMYAKCGFVHSANKMFEKIKEKSLVT 471
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
WN+++ GF++N + +++F ++ + +K D TF VI+AC + + G VH
Sbjct: 472 WNSMICGFSQNGYSVEAITLFDQMYMNC-VKMDKLTFLSVIQACSHLGYLEKGKWVHHKL 530
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
GL D ++ AL MY KC ++ +F+ M ER++VSW+ +I G+ +G +
Sbjct: 531 IMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATI 590
Query: 287 DLLIKMMGCEEGFIPDVITVVTVL 310
L +M+G G P+ IT + +L
Sbjct: 591 SLFNQMLG--SGIKPNDITFMHIL 612
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 121/232 (52%), Gaps = 7/232 (3%)
Query: 82 KALSLLQENLHNADLKEATGV---LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
+A+SL E ++ + + V +L+AC D+ +G +VH V F +D ++ T
Sbjct: 82 EAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRV-IKCGFESDAVVETS 140
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+ MY D+ + FD++ R++ W+++V F +N ++ L +F ++ S+ ++P
Sbjct: 141 LLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEA-VEP 199
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D+ T V +AC + + G VHG + + + ++N+LI MYGK + +LF
Sbjct: 200 DSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLF 259
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E +P R W +I ++++G E+ ++ KM E P+ +T+V VL
Sbjct: 260 ENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQ--EFKMEPNQVTMVGVL 309
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 103/199 (51%), Gaps = 5/199 (2%)
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNL 164
+AC + +G+ VH V + ++ +N LI MY G + R+F+++ R
Sbjct: 209 EACSELGSLRLGRSVHGYV-VRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMT 267
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
W ++S + ++ + + L++F ++ + +++P+ T V+ AC + V G VHG
Sbjct: 268 APWTPMISCYNQSGCFQEALNVFAKMQ-EFKMEPNQVTMVGVLCACARLGRVKEGRSVHG 326
Query: 225 MAAKMGLIGDV-FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ + ++ F+ AL+ +Y + + K+FE + E+ ++SWN++I F+ NG
Sbjct: 327 FVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPE 386
Query: 284 ESFDLLIKMMGCEEGFIPD 302
E+ L ++M +G +PD
Sbjct: 387 EALLLFVQMQ--TQGLMPD 403
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++QAC H +E GK VH + D ++T L MYS CG + VFD + R
Sbjct: 510 VIQACSHLGYLEKGKWVHHKL-IMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSER 568
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
++ W+ +++G+ + +S+F ++ + +KP++ TF ++ AC
Sbjct: 569 SIVSWSVMIAGYGMHGQINATISLFNQMLG-SGIKPNDITFMHILSAC 615
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 125/208 (60%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC K + G++VH L+ S SN+F+ NT LI MY+ CG +R VFD + R
Sbjct: 127 VLKACSRMKALREGEQVHALILKSGFKSNEFVENT-LIQMYANCGQIGVARHVFDGMPER 185
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+++SG+TKN L+ +V+ +F ++ + ++ D+ T V+ ACG +A++ G +
Sbjct: 186 SIVAWNSMLSGYTKNGLWDEVVKLFRKIL-ELRIEFDDVTMISVLMACGRLANLEIGELI 244
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
GL + ++ +LI MY KC V+ KLF+ M +R++V+W+++I G+++
Sbjct: 245 GEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRC 304
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L +M + P+ +T+V+VL
Sbjct: 305 KEALNLFHEMQ--KGNVYPNEVTMVSVL 330
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 107/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG ++EIG+ + E + + N+ + T LI MY+ CG +R++FD + R
Sbjct: 228 VLMACGRLANLEIGELIGEYIVSKGLRRNN-TLTTSLIDMYAKCGQVDTARKLFDEMDKR 286
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+A++SG+ + + + L++F E+ + P+ T V+ +C + G V
Sbjct: 287 DVVAWSAMISGYAQADRCKEALNLFHEMQKGN-VYPNEVTMVSVLYSCAMLGAYETGKWV 345
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K + V + LI Y KC +++ V++F+ M +N+ +W ++I G + NG
Sbjct: 346 HFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEG 405
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + M+ E P+ +T + VL
Sbjct: 406 KMALEFFSSML--ENDVKPNDVTFIGVL 431
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 7/210 (3%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLD-SRRVFDSLK 160
++LQ C KD++ +VH + + + + I L + L +D + +F+ +
Sbjct: 26 LILQQCKTPKDLQ---QVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHID 82
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+N ++ G + L +F ++ + ++ D FTF V+KAC + + G
Sbjct: 83 KPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKS-VQHDKFTFSSVLKACSRMKALREGE 141
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH + K G + FV N LI MY C + +F+ MPER++V+WNS++ G+++NG
Sbjct: 142 QVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNG 201
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E L K++ F D +T+++VL
Sbjct: 202 LWDEVVKLFRKILELRIEF--DDVTMISVL 229
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 6/196 (3%)
Query: 82 KALSLLQE-NLHNADLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
+AL+L E N E T V +L +C E GK VH + + + T+L
Sbjct: 306 EALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIK-KKKMKLTVTLGTQL 364
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
I Y+ CG+ S VF + +N+F W AL+ G N L F + + ++KP+
Sbjct: 365 IDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSML-ENDVKPN 423
Query: 200 NFTFPCVIKACGGIADVGFGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ TF V+ AC V G + + M + + ++ + G+ F+EE +
Sbjct: 424 DVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFI 483
Query: 259 EVMP-ERNLVSWNSII 273
+ MP N V W +++
Sbjct: 484 DNMPFPPNAVVWRTLL 499
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 122/240 (50%), Gaps = 8/240 (3%)
Query: 74 CEESKSLNKALSLLQENLHNADLKEATGVL---LQACGHEKDIEIGKRVHELVSASTQFS 130
C +S KAL L E L + +G+L L+AC G ++H L + F
Sbjct: 393 CAQSGCPTKALELFYEFKMEDGLAD-SGILVAVLRACSSLTLKPEGMQIHGL-ATKMGFV 450
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
+D + + L+ +Y+ C S++VF L ++L WNAL+SG+ ++E + L F ++
Sbjct: 451 SDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDM 510
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
+ E++P+ T C++ C ++ + VHG + GL V VSN+LIA Y KC
Sbjct: 511 QLE-EIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGD 569
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + FE MPERN VSWNSII G + + E L KM+ G PD +T +L
Sbjct: 570 INSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVA--SGIKPDHVTFTAIL 627
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L C DI GK++H L+ N+ + T L+ MY CG ++F +
Sbjct: 323 LFSLCSESLDIAFGKQIHGLI-FKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNH 381
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL W+A++S ++ T L +F E + L D+ V++AC + G +
Sbjct: 382 NLIMWSAVISNCAQSGCPTKALELFYEFKMEDGL-ADSGILVAVLRACSSLTLKPEGMQI 440
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+A KMG + DVFV +AL+ +Y KC + K+F + +++LVSWN++I G++++ +
Sbjct: 441 HGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECA 500
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ M E P+ +T+ +L
Sbjct: 501 DEALKAFRDMQ--LEEIRPNTVTIACIL 526
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 87/142 (61%), Gaps = 3/142 (2%)
Query: 168 NALVSGFTKNELYTDVLSIFVELSSDTELKPDNFT-FPCVIKACGGIADVGFGSGVHGMA 226
N ++ +T++ + D + +++++ D +K + F FPC+IKA GG+ DV G +HG
Sbjct: 77 NNVIREYTEDGFFDDAIGVYLKMLDDG-VKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHV 135
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
K+G++ DV V N+L+ MY KC VE+ V++FE MPE +LVSWN++I GF ++ S
Sbjct: 136 LKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSL 195
Query: 287 DLLIKMMGCEEGFIPDVITVVT 308
+ + M E G P+ + V+
Sbjct: 196 -MFFRSMVWEFGIYPNRVACVS 216
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 8/213 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L++A G D+ G+++H V + ++N+ L+TMY CG D+ ++F+ +
Sbjct: 115 LIKAFGGLCDVYKGRQIHGHVLKLGVLDDVSVVNS-LLTMYWKCGVVEDAVQMFEKMPEV 173
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN ++SGF K+ YT L F + + + P+ I +C + + G +
Sbjct: 174 DLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREI 233
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE-----RNLVSWNSIICGFS 277
HG+ K GL + ++ ++LI MY KC ++ +F + + RN V WN +I G+
Sbjct: 234 HGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYV 293
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
NG ++ L IKMM G PD T+V++
Sbjct: 294 SNGCFSQALLLFIKMM--VWGIKPDYSTMVSLF 324
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 97/189 (51%), Gaps = 7/189 (3%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL-----K 160
+C + + G+ +H +V S ++++++ LI MY CG ++ +F+S+
Sbjct: 220 SCSSLQSLTHGREIHGVVVKSGLDVEEYLVSS-LIEMYMKCGSIKNAENIFNSILDKDSV 278
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN WN ++SG+ N ++ L +F+++ +KPD T + C D+ FG
Sbjct: 279 RRNAVIWNVMISGYVSNGCFSQALLLFIKMMV-WGIKPDYSTMVSLFSLCSESLDIAFGK 337
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG+ K GL ++ V AL+ MY KC + +K+F NL+ W+++I +++G
Sbjct: 338 QIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSG 397
Query: 281 FSCESFDLL 289
++ +L
Sbjct: 398 CPTKALELF 406
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 68/161 (42%), Gaps = 3/161 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C H + + K VH + + +++ LI Y+ CG S F+ + R
Sbjct: 525 ILSVCAHLSVMTLCKEVHGYL-IRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPER 583
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WN+++ G + +++ +F ++ + + +KPD+ TF ++ AC V G
Sbjct: 584 NDVSWNSIILGMGMHSRTDEMIVLFDKMVA-SGIKPDHVTFTAILSACSHAGRVDEGCKY 642
Query: 223 -HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
M L + ++ + G+ + + L MP
Sbjct: 643 FKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMP 683
>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 129/240 (53%), Gaps = 13/240 (5%)
Query: 73 LCEESKSLNKALSLLQENLHNADLKEAT-GVLLQACGHEKDIEIGKRVHE-LVSASTQFS 130
LCEE L + ++EN N E T G L+ AC + GK H LV + + S
Sbjct: 222 LCEEGLVL---FNRMREN--NVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELS 276
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
+ + T L+ MY CG ++RRVF+ +L W A++ G+T N + LS+F ++
Sbjct: 277 SCLV--TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM 334
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
E+KP+ T V+ CG I ++ G VHG++ K+G I D V+NAL+ MY KC
Sbjct: 335 KG-VEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQ 392
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +FE+ E+++V+WNSII GFS+NG E+ L +M E P+ +TV ++
Sbjct: 393 NRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN--SESVTPNGVTVASLF 450
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 109/207 (52%), Gaps = 5/207 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+AC +D++ GK++H + F N ++ T L+ MY+ CG + +VF+ + RN
Sbjct: 149 LKACTELQDLDNGKKIHCQLVKVPSFDN--VVLTGLLDMYAKCGEIKSAHKVFNDITLRN 206
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W ++++G+ KN+L + L +F + + L + +T+ +I AC ++ + G H
Sbjct: 207 VVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVL-GNEYTYGTLIMACTKLSALHQGKWFH 265
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G K G+ + +L+ MY KC + ++F +LV W ++I G++ NG
Sbjct: 266 GCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVN 325
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L KM G E P+ +T+ +VL
Sbjct: 326 EALSLFQKMKGVE--IKPNCVTIASVL 350
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 127/237 (53%), Gaps = 11/237 (4%)
Query: 79 SLNKALSLLQENLHNADLKE---ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
S+N+ALSL Q+ + ++K +L CG +++E+G+ VH L S + +
Sbjct: 323 SVNEALSLFQK-MKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGL-SIKVGIWDTNVA 380
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
N L+ MY+ C D++ VF+ +++ WN+++SGF++N + L +F ++S++
Sbjct: 381 NA-LVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSES- 438
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD--VFVSNALIAMYGKCAFVEE 253
+ P+ T + AC + + GS +H + K+G + V V AL+ Y KC +
Sbjct: 439 VTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQS 498
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ + E+N ++W+++I G+ + G + S +L +M+ ++ P+ T ++L
Sbjct: 499 ARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQK--PNESTFTSIL 553
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 81/161 (50%), Gaps = 2/161 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I T+L+++Y G+ D+R VFD + + + W ++ + N+ +V+ ++ +L
Sbjct: 75 DISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLY-DLL 133
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ D+ F +KAC + D+ G +H K+ +V ++ L+ MY KC +
Sbjct: 134 MKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLT-GLLDMYAKCGEI 192
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ K+F + RN+V W S+I G+ +N E L +M
Sbjct: 193 KSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRM 233
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 3/162 (1%)
Query: 103 LLQACGHEKDIEIGKRVHEL-VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
L AC + +G +H V S+ + T L+ Y+ CG P +R +FD+++
Sbjct: 449 LFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEE 508
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N W+A++ G+ K L +F E+ + KP+ TF ++ ACG V G
Sbjct: 509 KNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ-KPNESTFTSILSACGHTGMVNEGKK 567
Query: 222 V-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
M ++ M + +E+ + + E MP
Sbjct: 568 YFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMP 609
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ GL+GD+ ++ L+++YG + ++ +F+ +PE + W ++ + N S
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 283 CES---FDLLIKMMGCEEGFIPDVI 304
E +DLL+K GF D I
Sbjct: 124 VEVVKLYDLLMK-----HGFRYDDI 143
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 133/273 (48%), Gaps = 15/273 (5%)
Query: 39 SLRSIFKEKSSLSLSAKTNNASTQGLHFLQ-EITTLCEESKSLNKALSLLQENLHNADLK 97
S + +F+E S S+ + T+ + L E L EE ++E + D+
Sbjct: 349 SAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEE----------MEEEGISPDVY 398
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
T VL C + ++ GKRVHE + D ++ L+ MY+ CG ++ VF
Sbjct: 399 TVTAVL-NCCARNRLLDEGKRVHEWIK-ENDMGFDIFVSNALMDMYAKCGSMREAELVFS 456
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
++ +++ WN ++ G++KN + LS+F L + PD T CV+ AC ++
Sbjct: 457 EMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFD 516
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G +HG + G D V+N+L+ MY KC + LF+ + ++LVSW +I G+
Sbjct: 517 KGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYG 576
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+GF E+ L +M + G PD I+ V++L
Sbjct: 577 MHGFGKEAIALFNQMR--QAGIEPDEISFVSLL 607
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 148/300 (49%), Gaps = 16/300 (5%)
Query: 14 PLFPSLRQKKSQPQFPATVIQRNKHSLRSIFKEKSSLS-LSAKTNNASTQGLHFLQEITT 72
P F + ++ +S + VI N+ SLR++ S++ +A+TQ F
Sbjct: 19 PHFQTHKELRSDVRVRKDVIF-NRASLRTVSDRADSITTFDRSVTDANTQLRRFC----- 72
Query: 73 LCEESKSLNKALSLLQ-ENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSN 131
ES +L A+ LL + D + VL Q C K ++ GK V + + F
Sbjct: 73 ---ESGNLKNAVKLLHVSGKWDIDPRTLCSVL-QLCADSKSLKDGKEVDNFIRGNG-FVL 127
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + ++L MY+ CG ++ RVFD +K WN L++ K+ ++ + +F ++
Sbjct: 128 DSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM 187
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
S + ++ D++TF CV K+ + V G +HG K G V N+L+A Y K V
Sbjct: 188 S-SGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRV 246
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ K+F+ M ER+++SWNSII G+ NG + + + ++M+ G D+ T+V+V
Sbjct: 247 DSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLF--SGIEIDLATIVSVFA 304
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 3/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ C + I +G+ VH + D NT L+ MYS CG ++ VF + R
Sbjct: 302 VFAGCADSRLISLGRAVHCFGVKACFSREDRFCNT-LLDMYSKCGDLDSAKVVFREMSGR 360
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ + ++++G+ + L + + +F E+ + + PD +T V+ C + G V
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG-ISPDVYTVTAVLNCCARNRLLDEGKRV 419
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + + D+FVSNAL+ MY KC + E +F M ++++SWN++I G+S+N ++
Sbjct: 420 HEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYA 479
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ L ++ E+ F PD TV VLP
Sbjct: 480 NEALSLF-NLLLVEKRFSPDERTVACVLP 507
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 8/202 (3%)
Query: 111 KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDS-RRVFDSLKTRNLFQWNA 169
+ + G+++H + S F + L+ Y L +DS R+VFD + R++ WN+
Sbjct: 209 RSVNGGEQLHGYILKSG-FGERNSVGNSLVAFY-LKNHRVDSARKVFDEMTERDVISWNS 266
Query: 170 LVSGFTKNELYTDVLSIFVE-LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK 228
+++G+ N L LS+FV+ L S E+ D T V C + G VH K
Sbjct: 267 IINGYVSNGLAEKGLSVFVQMLFSGIEI--DLATIVSVFAGCADSRLISLGRAVHCFGVK 324
Query: 229 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
+ N L+ MY KC ++ +F M R++VS+ S+I G++ G + E+ L
Sbjct: 325 ACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKL 384
Query: 289 LIKMMGCEEGFIPDVITVVTVL 310
+M EEG PDV TV VL
Sbjct: 385 FEEME--EEGISPDVYTVTAVL 404
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 106/190 (55%), Gaps = 3/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC ++ G+ VH V + SN + N LI MY+ CG ++R VF + +
Sbjct: 403 IVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNA-LINMYAKCGSVEEARLVFSKIPVK 461
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN ++ G+++N L + L +F+++ + KPD+ T CV+ AC G+A + G +
Sbjct: 462 DIVSWNTMIGGYSQNLLPNEALELFLDMQK--QFKPDDITMACVLPACAGLAALDKGREI 519
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + G D+ V+ AL+ MY KC + LF+++P+++L+SW +I G+ +GF
Sbjct: 520 HGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFG 579
Query: 283 CESFDLLIKM 292
E+ +M
Sbjct: 580 NEAISTFNEM 589
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 118/217 (54%), Gaps = 6/217 (2%)
Query: 95 DLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRR 154
DL VL+ AC + ++ +G+ +H FS + + + L+ MYS CG +
Sbjct: 295 DLTTLVSVLV-ACANIGNLSLGRALHGF-GVKACFSEEVVFSNTLLDMYSKCGNLNGATE 352
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VF + + W ++++ + + LY+D + +F E+ S ++PD +T ++ AC +
Sbjct: 353 VFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKG-VRPDIYTVTSIVHACACSS 411
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+ G VH K G+ ++ V+NALI MY KC VEE +F +P +++VSWN++I
Sbjct: 412 SLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 471
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G+S+N E+ +L + M ++ F PD IT+ VLP
Sbjct: 472 GYSQNLLPNEALELFLDM---QKQFKPDDITMACVLP 505
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQ C +K +E GKRVH ++ S S D + +L+ MY CG + R++FD +
Sbjct: 100 VLQLCAEKKSLEDGKRVHSVI-ISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 158
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+F WN L+S + K + + +S+F ++ + + +TF CV+K + V V
Sbjct: 159 KVFLWNLLMSEYAKIGNFRESVSLFKKMQK-LGVVGNCYTFTCVLKCFAALGKVKECKRV 217
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K+G + V N+LIA Y K VE LF+ + E ++VSWNS+I G NGFS
Sbjct: 218 HGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFS 277
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ I+M+ G D+ T+V+VL
Sbjct: 278 GNGLEIFIQMLIL--GVEVDLTTLVSVL 303
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 140/261 (53%), Gaps = 21/261 (8%)
Query: 55 KTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGV--LLQACGHEKD 112
KT + +G L + +LC++ + L +AL +LQ+ + N ++ LLQ C + K
Sbjct: 23 KTKEGTGKGNDGL--VKSLCKQGR-LREALHILQDMVENGIWPHSSTYDSLLQGCLNAKS 79
Query: 113 IEIGKRVHELVSASTQFS-NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
+ K +H + TQF D + +L+++Y G +++RRVFD + +N+ W A++
Sbjct: 80 LPDAKLLHAHM-IQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMI 138
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
+ + ++E + L F E+ D ++P++FTF ++ AC + +G H K G
Sbjct: 139 AAYARHEHGQEALGFFYEM-QDVGIQPNHFTFASILPACTDLEVLG---EFHDEIVKGGF 194
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
+VFV N L+ MY K +E +LF+ MP+R++VSWN++I G+ +NG ++ L +
Sbjct: 195 ESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQE 254
Query: 292 MMGCEEGFIP--DVITVVTVL 310
IP DVIT T++
Sbjct: 255 --------IPKRDVITWNTMM 267
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 98/172 (56%), Gaps = 3/172 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+I+ ++ G ++ ++F ++ N+ WNA+++G+++N + L +F ++ ++KP
Sbjct: 328 VISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQM-VDMKP 386
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ TF V+ AC +A + G+ H + + G DV V N L+ MY KC +E+ K+F
Sbjct: 387 NTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVF 446
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ M +++ S +++I G++ NG S ES +L +M G PD +T V VL
Sbjct: 447 DRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFT--GLKPDRVTFVGVL 496
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 13/193 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC D+E+ H+ + SN F+ N L+ MY+ G +R +FD + R
Sbjct: 172 ILPAC---TDLEVLGEFHDEIVKGGFESNVFVGNG-LVDMYAKRGCIEFARELFDKMPQR 227
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA+++G+ +N L D L +F E+ K D T+ ++ DV +
Sbjct: 228 DVVSWNAMIAGYVQNGLIEDALKLFQEIP-----KRDVITWNTMMAGYAQCGDVENAVEL 282
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ L+ N +IA Y + V+E KLF++MPERN++SWN++I GF++NG
Sbjct: 283 FEKMPEQNLVS----WNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQV 338
Query: 283 CESFDLLIKMMGC 295
E+ L M C
Sbjct: 339 EEALKLFKTMPEC 351
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 4/122 (3%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
E ++L AC +E G HE+V S F +D ++ L+ MY+ CG D+R+VFD
Sbjct: 389 ETFAIVLPACAALAVLEQGNEAHEVVIRSG-FQSDVLVGNTLVGMYAKCGSIEDARKVFD 447
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIAD 215
++ ++ +A++ G+ N + L +F ++ T LKPD TF V+ AC G+ D
Sbjct: 448 RMRQQDSASLSAMIVGYAINGCSKESLELFEQMQF-TGLKPDRVTFVGVLSACCHAGLVD 506
Query: 216 VG 217
G
Sbjct: 507 EG 508
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
D+ + N L+++Y K + E ++F+ MP +N+VSW ++I ++ + E+ +M
Sbjct: 99 DISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQ 158
Query: 294 GCEEGFIPDVITVVTVLP 311
+ G P+ T ++LP
Sbjct: 159 --DVGIQPNHFTFASILP 174
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 138/280 (49%), Gaps = 42/280 (15%)
Query: 70 ITTLCEESKSLNKALSLLQENLH-NADLKEAT-GVLLQACGHEKDIEIGKRVHELVSAST 127
+ T E++ +++AL + E + + E T ++ AC I+ G+++H V
Sbjct: 223 LITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCD 282
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR------------------------- 162
+F ND I+ L+ MY+ C ++R +FD + R
Sbjct: 283 EFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMF 342
Query: 163 ------NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
++ WNAL++G T+N + L +F L ++ + P ++TF ++ AC +AD+
Sbjct: 343 SNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRES-VWPTHYTFGNLLNACANLADL 401
Query: 217 GFGSGVHGMAAKMGLI------GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
G H K G DVFV N+LI MY KC VE ++F+ M E++ VSWN
Sbjct: 402 QLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWN 461
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++I G+++NGF ++ ++ KM+ E G PD +T++ VL
Sbjct: 462 AMIVGYAQNGFGNKALEVFCKML--ESGEAPDHVTMIGVL 499
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 114/238 (47%), Gaps = 33/238 (13%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL C + RVH + S F+++ I RLI +Y CG +R++FD + R
Sbjct: 25 LLNQCARSRSARDTSRVHACIIKSP-FASETFIQNRLIDVYGKCGCVDVARKLFDRMLER 83
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK------------------------- 197
N+F WN+++ FTK+ D + IF ++ +
Sbjct: 84 NIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMH 143
Query: 198 -----PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ ++F + AC G+ D+ GS +H + + + DV++ +AL+ MY KC VE
Sbjct: 144 GHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVE 203
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ M R+ VSWNS+I + +NG E+ + ++M+ C G PD +T+ +V+
Sbjct: 204 YAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKC--GVEPDEVTLASVV 259
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 98/179 (54%), Gaps = 3/179 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G L AC +D+++G ++H LV S S D + + L+ MYS CG ++ VFD +
Sbjct: 155 GSALSACAGLQDLKLGSQIHSLVYRSNYLS-DVYMGSALVDMYSKCGRVEYAQSVFDEMT 213
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R+ WN+L++ + +N + L IFVE+ ++PD T V+ AC I+ + G
Sbjct: 214 VRSRVSWNSLITCYEQNGPVDEALKIFVEMIK-CGVEPDEVTLASVVSACATISAIKEGQ 272
Query: 221 GVHGMAAKMG-LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
+H K D+ + NAL+ MY KC + E +F++MP R++VS S++ G+++
Sbjct: 273 QIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAK 331
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%)
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D+ F ++ C S VH K + F+ N LI +YGKC V+ KLF
Sbjct: 18 DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ M ERN+ SWNSIIC F+++GF ++ + KM
Sbjct: 78 DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKM 111
>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 139/274 (50%), Gaps = 25/274 (9%)
Query: 47 KSSLSLSAKT-------NNASTQGLHFLQEITTLCE---ESKSLNKALSLLQENLHNADL 96
K+SLSLS + + TQ Q + +L E S+SLN +LS +
Sbjct: 47 KTSLSLSNPNPCLRPFNSTSPTQFFTSPQHLVSLSEPLFASRSLNTSLSTIASPFD---- 102
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
LL+ D ++ + VH + + D + LI+ Y G D+ +VF
Sbjct: 103 ------LLRLSTRYGDPDLARAVH---AQFLKLEEDIFLGNALISAYLKLGLVRDADKVF 153
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
L N+ + AL+SGF+K++ + + +F + D+ ++P+ +TF ++ AC D
Sbjct: 154 SGLSCPNVVSYTALISGFSKSDWEDEAVELFFAML-DSGIEPNEYTFVAILTACIRNMDY 212
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
GS VHG+ K+GL+ VF+ NAL+ +Y KC F++ +++LFE MPER++ SWN++I
Sbjct: 213 QLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSL 272
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+FD M C +G D ++ T+L
Sbjct: 273 VKEFKYDEAFDYFRGMQLC-KGLKVDHFSLSTLL 305
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 95/190 (50%), Gaps = 1/190 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC D ++G +VH +V S FI N L+ +Y CGF R+F+ + R
Sbjct: 202 ILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNA-LMGLYCKCGFLDLVLRLFEEMPER 260
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN ++S K Y + F + LK D+F+ ++ AC G G +
Sbjct: 261 DITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQL 320
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A K+GL + VS++LI Y KC ++ LFE MP R++++W +I + E G
Sbjct: 321 HALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGML 380
Query: 283 CESFDLLIKM 292
+ ++ KM
Sbjct: 381 DSAVEVFNKM 390
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 115/236 (48%), Gaps = 7/236 (2%)
Query: 77 SKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
S++L + +L+E + +D + ++ ACG K ++ +++ V SN I
Sbjct: 412 SRALELFIEMLEEGVEISDCTLTS--IITACGLLKSFKVSQQIQGFVMKFGILSNS-CIE 468
Query: 137 TRLITMYSLCGFPLDSRRVF--DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
T L+ MY+ CG D+ ++F SL+ +++ G+ +N + +S+F S+
Sbjct: 469 TALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEG 528
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+ D ++ CG I G +H A K GLI + V NA ++MY KC +++
Sbjct: 529 AIVMDEVMSTSILSLCGSIGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDA 588
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
V++F M +++VSWN ++ G + ++ + KM + G PD IT ++
Sbjct: 589 VRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKME--KAGIKPDSITFALII 642
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
D I T +IT Y G + VF+ + RN +NA+++G ++N+ + L +F+E+
Sbjct: 362 RDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEM 421
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
+ ++ + T +I ACG + + G K G++ + + AL+ MY +C
Sbjct: 422 LEEG-VEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGR 480
Query: 251 VEEMVKLFEVMPERNLVS--WNSIICGFSENGFSCESFDLL 289
+E+ K+F N + S+ICG++ NG E+ L
Sbjct: 481 MEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLF 521
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
Query: 80 LNKALSLLQENLHNADL---KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
LN+A+SL + + + +L CG E+G ++H S + + N
Sbjct: 514 LNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGMQMHCHALKSGLITETGVGN 573
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
++MYS C D+ RVF+++ +++ WN LV+G + L I+ ++ +
Sbjct: 574 AT-VSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEK-AGI 631
Query: 197 KPDNFTFPCVIKA 209
KPD+ TF +I A
Sbjct: 632 KPDSITFALIISA 644
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQ C ++DI + K+VH + S N ++ N +L+ +Y CG +R+VFD L +
Sbjct: 124 ILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVAN-KLLRVYIRCGRLQCARQVFDKLLKK 182
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N++ W ++ G+ + D + ++ ++ + +P+ T+ ++KAC ++ +G +
Sbjct: 183 NIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECG-QPNEITYLSILKACCCPVNLKWGKKI 241
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G DV V AL+ MY KC +E+ +F+ M ERN++SW +I G + G
Sbjct: 242 HAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRG 301
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F L ++M EGFIP+ T V++L
Sbjct: 302 QEAFHLFLQMQ--REGFIPNSYTYVSIL 327
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 116/232 (50%), Gaps = 7/232 (3%)
Query: 81 NKALSLLQENLHNADLKEATGVL--LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
+ALSL + + +AT + L A E+ +E K VH A+ D +
Sbjct: 607 REALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHS--HATDAGLVDLRVGNA 664
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+ YS CG +++VFD + RN+ W ++ G ++ D S F+++ + + P
Sbjct: 665 LVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREG-IVP 723
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D T+ ++ AC + + VH A GL+ D+ V NAL+ MY KC +++ +F
Sbjct: 724 DATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVF 783
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ M ER++ SW +I G +++G E+ D +KM EGF P+ + V VL
Sbjct: 784 DDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMK--SEGFKPNGYSYVAVL 833
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 100/182 (54%), Gaps = 3/182 (1%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F +D I LI MY+ CG D+R VFD + R++ WNA++ G +N + ++F+
Sbjct: 454 FISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFL 513
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
++ + L PD+ T+ ++ G + + + VH A + GLI D V +A I MY +C
Sbjct: 514 QMQQEG-LVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRC 572
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
+++ LF+ + R++ +WN++I G ++ E+ L ++M EGFIPD T +
Sbjct: 573 GSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQ--REGFIPDATTFIN 630
Query: 309 VL 310
+L
Sbjct: 631 IL 632
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 111/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC +++ GK++H + S F +D + T L+ MY CG D++ +FD + R
Sbjct: 225 ILKACCCPVNLKWGKKIHAHIIQSG-FQSDVRVETALVNMYVKCGSIEDAQLIFDKMVER 283
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W ++ G + +F+++ + + P+++T+ ++ A + + V
Sbjct: 284 NVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFI-PNSYTYVSILNANASAGALEWVKEV 342
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A GL D+ V NAL+ MY K +++ +F+ M ER++ SW +I G +++G
Sbjct: 343 HSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRG 402
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F L ++M G +P++ T +++L
Sbjct: 403 QEAFSLFLQMQ--RNGCLPNLTTYLSIL 428
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 113/210 (53%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L A +E K VH + + + D + L+ MY+ G D+R VFD + R
Sbjct: 326 ILNANASAGALEWVKEVHSH-AVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTER 384
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGS 220
++F W ++ G ++ + S+F+++ + L P+ T+ ++ A + + +
Sbjct: 385 DIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCL-PNLTTYLSILNASAIASTSALEWVK 443
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH A + G I D+ + NALI MY KC +++ +F+ M +R+++SWN+++ G ++NG
Sbjct: 444 VVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNG 503
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F + ++M +EG +PD T +++L
Sbjct: 504 CGHEAFTVFLQMQ--QEGLVPDSTTYLSLL 531
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D+F++ +++ C D+ VH K G+ +++V+N L+ +Y +C ++ ++F
Sbjct: 117 DSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVF 176
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + ++N+ W ++I G++E G + ++ + KM +E P+ IT +++L
Sbjct: 177 DKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMR--QECGQPNEITYLSIL 226
>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 139/274 (50%), Gaps = 25/274 (9%)
Query: 47 KSSLSLSAKT-------NNASTQGLHFLQEITTLCE---ESKSLNKALSLLQENLHNADL 96
K+SLSLS + + TQ Q + +L E S+SLN +LS +
Sbjct: 47 KTSLSLSNPNPCLRPFNSTSPTQFFTSPQHLVSLSEPLFASRSLNTSLSTIASPFD---- 102
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
LL+ D ++ + VH + + D + LI+ Y G D+ +VF
Sbjct: 103 ------LLRLSTRYGDPDLARAVH---AQFLKLEEDIFLGNALISAYLKLGLVRDADKVF 153
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
L N+ + AL+SGF+K++ + + +F + D+ ++P+ +TF ++ AC D
Sbjct: 154 SGLSCPNVVSYTALISGFSKSDWEDEAVELFFAML-DSGIEPNEYTFVAILTACIRNMDY 212
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
GS VHG+ K+GL+ VF+ NAL+ +Y KC F++ +++LFE MPER++ SWN++I
Sbjct: 213 QLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSL 272
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+FD M C +G D ++ T+L
Sbjct: 273 VKEFKYDEAFDYFRGMQLC-KGLKVDHFSLSTLL 305
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 95/190 (50%), Gaps = 1/190 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC D ++G +VH +V S FI N L+ +Y CGF R+F+ + R
Sbjct: 202 ILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNA-LMGLYCKCGFLDLVLRLFEEMPER 260
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN ++S K Y + F + LK D+F+ ++ AC G G +
Sbjct: 261 DITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQL 320
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A K+GL + VS++LI Y KC ++ LFE MP R++++W +I + E G
Sbjct: 321 HALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGML 380
Query: 283 CESFDLLIKM 292
+ ++ KM
Sbjct: 381 DSAVEVFNKM 390
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 115/236 (48%), Gaps = 7/236 (2%)
Query: 77 SKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
S++L + +L+E + +D + ++ ACG K ++ +++ V SN I
Sbjct: 412 SRALELFIEMLEEGVEISDCTLTS--IITACGLLKSFKVSQQIQGFVMKFGILSNS-CIE 468
Query: 137 TRLITMYSLCGFPLDSRRVF--DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
T L+ MY+ CG D+ ++F SL+ +++ G+ +N + +S+F S+
Sbjct: 469 TALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEG 528
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+ D ++ CG I G +H A K GLI + V NA ++MY KC +++
Sbjct: 529 AIVMDEVMSTSILSLCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDA 588
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
V++F M +++VSWN ++ G + ++ + KM + G PD IT ++
Sbjct: 589 VRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKME--KAGIKPDSITFALII 642
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
D I T +IT Y G + VF+ + RN +NA+++G ++N+ + L +F+E+
Sbjct: 362 RDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEM 421
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
+ ++ + T +I ACG + + G K G++ + + AL+ MY +C
Sbjct: 422 LEEG-VEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGR 480
Query: 251 VEEMVKLFEVMPERNLVS--WNSIICGFSENGFSCESFDLL 289
+E+ K+F N + S+ICG++ NG E+ L
Sbjct: 481 MEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLF 521
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 80 LNKALSLLQENLHNADL---KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
LN+A+SL + + + +L CG E+GK++H S + + N
Sbjct: 514 LNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQMHCHALKSGLITETGVGN 573
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
++MYS C D+ RVF+++ +++ WN LV+G + L I+ ++ +
Sbjct: 574 AT-VSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEK-AGI 631
Query: 197 KPDNFTFPCVIKA 209
KPD+ TF +I A
Sbjct: 632 KPDSITFALIISA 644
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+A K + GK +H + +S+D + + L+ MY G+ +R +F+S + R
Sbjct: 326 VLEAVTSLKAFQYGKEIHARI-VQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRER 384
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+++++G+++NE LS+F E+ D ++P++ TF I AC G+ + G+ +
Sbjct: 385 DVVSWSSMIAGYSQNESPARALSLFREMEVDG-VQPNSVTFVSAIDACAGVGALRRGTQL 443
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +GL DV V+ AL+ +YGKC +EE +F M ++NL++W SI + +NG
Sbjct: 444 HERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHG 503
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
S LL M +G PD I V +L
Sbjct: 504 SRSLKLLHGME--LQGMKPDGIVFVAIL 529
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 115/212 (54%), Gaps = 5/212 (2%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
T +LL+ G E++++ GKRVH + T + D ++ ++ MY CG + VFDS+
Sbjct: 120 TSILLKWSGRERNLDEGKRVHSHI-MQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSI 178
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+ N+F W +++ + +N +VL + ++ +KPD +TF V+ AC + +
Sbjct: 179 QDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQ-AGVKPDGYTFTTVLGACTAVGALEEA 237
Query: 220 SGVHGMA-AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
+H + GL D V ALI +YGKC +EE +F + +++VSW+S+I F++
Sbjct: 238 KILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQ 297
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+G + + LL+ M EG P+ +T V VL
Sbjct: 298 SGQAKSAIQLLMLMD--LEGVRPNNVTFVNVL 327
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 109/217 (50%), Gaps = 8/217 (3%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSAST----QFSNDFIINTRLITMYSLCGFPLDSRR 154
A +L AC + + GKRVH LV + + ++ ++ +I MY CG +
Sbjct: 12 ACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALD 71
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVI-KACGGI 213
VFD +K +N+ W +L+S FT + D + +F ++ + + PD TF ++ K G
Sbjct: 72 VFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLL-SGVSPDRITFTSILLKWSGRE 130
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
++ G VH + G GD V N ++ MYGKC VE+ +F+ + + N+ SW II
Sbjct: 131 RNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIII 190
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+++NG E LL +M + G PD T TVL
Sbjct: 191 AAYAQNGHCMEVLRLLSRMN--QAGVKPDGYTFTTVL 225
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 106/208 (50%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E K +H +ST D + T LI +Y CG ++ VF + +
Sbjct: 224 VLGACTAVGALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNK 283
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+++++ F ++ + + + + + ++P+N TF V++A + +G +
Sbjct: 284 DIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEG-VRPNNVTFVNVLEAVTSLKAFQYGKEI 342
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G DV +++AL+ MY +VE +FE ER++VSW+S+I G+S+N
Sbjct: 343 HARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESP 402
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L +M +G P+ +T V+ +
Sbjct: 403 ARALSLFREME--VDGVQPNSVTFVSAI 428
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 7/121 (5%)
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD-----VFVSNALIAMYGKCA 249
E++ + ++ AC + + G VHG+ + L+ D + N +I MY +C
Sbjct: 5 EIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCG 64
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
+ + +F+ M ++N+V+W S+I F+ G ++ L KM+ G PD IT ++
Sbjct: 65 CTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKML--LSGVSPDRITFTSI 122
Query: 310 L 310
L
Sbjct: 123 L 123
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 118/209 (56%), Gaps = 4/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL AC ++ + G+RVH + T++ + TRL+ Y C D+R+V D +
Sbjct: 57 ALLNACLDKRALRDGQRVHAHM-IKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPE 115
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N+ W A++S +++ ++ L++F E+ ++ KP+ FTF V+ +C + +G G
Sbjct: 116 KNVVSWTAMISRYSQTGHSSEALTVFAEMMR-SDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG+ K +FV ++L+ MY K ++E ++FE +PER++VS +II G+++ G
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ ++ ++ EG P+ +T ++L
Sbjct: 235 DEEALEMFHRLH--SEGMSPNYVTYASLL 261
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 111/210 (52%), Gaps = 3/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L +C + +GK++H L+ + + + + L+ MY+ G ++R +F+ L
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLI-VKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ A+++G+ + L + L +F L S+ + P+ T+ ++ A G+A + G
Sbjct: 216 ERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEG-MSPNYVTYASLLTALSGLALLDHGK 274
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H + L + N+LI MY KC + +LF+ MPER +SWN+++ G+S++G
Sbjct: 275 QAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHG 334
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E +L ++M E+ PD +T++ VL
Sbjct: 335 LGREVLELF-RLMRDEKRVKPDAVTLLAVL 363
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
++ LI MYS CG +RR+FD++ R WNA++ G++K+ L +VL +F + +
Sbjct: 290 VLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDE 349
Query: 194 TELKPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+KPD T V+ C G + D G +A + G ++ M G+ +
Sbjct: 350 KRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRI 409
Query: 252 EEMVKLFEVMPER 264
+E + + MP +
Sbjct: 410 DEAFEFIKRMPSK 422
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 203 FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ ++ AC + G VH K + ++ L+ YGKC +E+ K+ + MP
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 263 ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+N+VSW ++I +S+ G S E+ + +MM + P+ T TVL
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK--PNEFTFATVL 160
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 114/210 (54%), Gaps = 4/210 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++L+A + I G+++H + + ++ L+ +YS+CG D ++VFD
Sbjct: 115 LVLKALALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPH 174
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R+L W L+ FTK LY+ + F+E+ D L+ D T V+ AC + D+ G
Sbjct: 175 RDLVSWTTLIQAFTKAGLYSRAVEAFMEM-CDLRLRADGRTLVVVLSACSNLGDLNLGQK 233
Query: 222 VHG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH + + + DVFV NAL+ MY KC + K+F+ MP +N+V+WN++I G + G
Sbjct: 234 VHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQG 293
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ D +MM ++G PD +T+V VL
Sbjct: 294 RYREALDTF-RMMQ-DKGVKPDEVTLVGVL 321
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 106/209 (50%), Gaps = 3/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V+L AC + D+ +G++VH + D + L+ MY C + +VFD +
Sbjct: 217 VVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPV 276
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N+ WNA++SG Y + L F + D +KPD T V+ +C + + G
Sbjct: 277 KNVVTWNAMISGLAYQGRYREALDTF-RMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKW 335
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH + ++ D FV NAL+ MY KC ++E ++FE M R++ S+ ++I G + +G
Sbjct: 336 VHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGE 395
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +F + +M G P+ +T + +L
Sbjct: 396 ANWAFQVFSEMF--RVGIEPNEVTFLGLL 422
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
Query: 168 NALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAA 227
NA++ ++N + + E+ L+PD FT P V+KA I + G +H +
Sbjct: 79 NAIIRSISRNSINLSPMEFLNEMLV-VGLEPDGFTIPLVLKALALIQGIREGQQIHARSI 137
Query: 228 KMGLIG-DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
K G++G +V+VSN L+ +Y C + ++ K+F+ P R+LVSW ++I F++ G +
Sbjct: 138 KTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSRAV 197
Query: 287 DLLIKMMGCEEGFIPDVITVVTVL 310
+ ++M C+ D T+V VL
Sbjct: 198 EAFMEM--CDLRLRADGRTLVVVL 219
>gi|326507562|dbj|BAK03174.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 105/192 (54%), Gaps = 4/192 (2%)
Query: 119 VHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNE 178
+H L S T F+ D + + ++ MY+ CG D+RRVFD + RN+ W+AL+ G+
Sbjct: 148 LHGLAS-KTPFAGDVFVGSAVLDMYAKCGNLSDARRVFDEMPERNVVSWSALIGGYADAG 206
Query: 179 LYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVS 238
++ L IF + + ++ ++FT C+++ C G+ VH + K L FV
Sbjct: 207 MHPSALCIF-RSALEEAVQVNDFTVSCIVRVCAAATLFELGAQVHARSIKTALDASPFVG 265
Query: 239 NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEG 298
++L+++Y KC V+ ++F PERNL WN+++ +++G + +F+ KM G
Sbjct: 266 SSLVSLYSKCGLVDCAYRVFSAAPERNLGIWNAVLIASAQHGHTSTAFERFTKMQ--HAG 323
Query: 299 FIPDVITVVTVL 310
F P+ IT + +L
Sbjct: 324 FRPNFITFLCLL 335
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 28/168 (16%)
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVF-DSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
S+ ++ L+T Y+ C P S R F D + + W++L+S F +N L F
Sbjct: 52 SSHALLAHHLLTFYARCSLPELSLRAFLDLPASPSPAAWSSLISSFAQNGLPAAAFDAFR 111
Query: 189 EL------SSDTELKP---------DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
+ ++D + P D+ P A +HG+A+K G
Sbjct: 112 RMLAAGVPATDRSIPPAAKAVAAAADSSRPPLAPHA------------LHGLASKTPFAG 159
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
DVFV +A++ MY KC + + ++F+ MPERN+VSW+++I G+++ G
Sbjct: 160 DVFVGSAVLDMYAKCGNLSDARRVFDEMPERNVVSWSALIGGYADAGM 207
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 96/230 (41%), Gaps = 18/230 (7%)
Query: 36 NKHSLRSIFKE---KSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLH 92
N R +F E ++ +S SA + G+H + LC +L +A+ + +
Sbjct: 176 NLSDARRVFDEMPERNVVSWSALIGGYADAGMH----PSALCIFRSALEEAVQVNDFTV- 230
Query: 93 NADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDS 152
+++ C E+G +VH S T + + L+++YS CG +
Sbjct: 231 --------SCIVRVCAAATLFELGAQVHAR-SIKTALDASPFVGSSLVSLYSKCGLVDCA 281
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
RVF + RNL WNA++ ++ + F ++ +P+ TF C++ AC
Sbjct: 282 YRVFSAAPERNLGIWNAVLIASAQHGHTSTAFERFTKMQ-HAGFRPNFITFLCLLTACSH 340
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
V G + + + +V A++ + G+ + E + L E MP
Sbjct: 341 AGLVDEGKRYFSLMKEYRIEPEVEHYAAMVDLLGRVGRITEALDLIESMP 390
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIA-----MYGKCAFVEEMVKLFEVMPER-NLVSWNSI 272
G +HG K G + V S+AL+A Y +C+ E ++ F +P + +W+S+
Sbjct: 34 GQQLHGHLLKGGHLPAVASSHALLAHHLLTFYARCSLPELSLRAFLDLPASPSPAAWSSL 93
Query: 273 ICGFSENGFSCESFDLLIKMMG 294
I F++NG +FD +M+
Sbjct: 94 ISSFAQNGLPAAAFDAFRRMLA 115
>gi|356577133|ref|XP_003556682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Glycine max]
Length = 773
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 122/243 (50%), Gaps = 6/243 (2%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSAST 127
+ T C + ++ALS+L + L + + L+ACG K ++ G ++H +
Sbjct: 410 MITACSQQGFGHEALSMLSQMLSDGFYPNEYTICSALKACGENKALKFGTQLHGAIIKKI 469
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
S D I T L+ MY+ CG +DS+ VFD ++ RN W +++SG+ +N + S F
Sbjct: 470 CKS-DVFIGTSLVDMYAKCGVMVDSKVVFDRMRIRNTATWTSIISGYARNGFGEEATSFF 528
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
L + + T V+ ACG I + FG VH K + +++V + L+ Y K
Sbjct: 529 -RLMKMKRIHVNKLTVLSVLMACGTIKSLLFGREVHAQIIKSNIHTNIYVGSTLVWFYCK 587
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
C K+ + MP R++VSW +II G + G E+ + L +MM EEG +P+ T
Sbjct: 588 CKEYSYAFKVLQYMPFRDVVSWTAIISGCARLGLEHEALEFLQEMM--EEGVLPNSYTYS 645
Query: 308 TVL 310
+ L
Sbjct: 646 SAL 648
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG K + G+ VH + S +N ++ +T L+ Y C + +V + R
Sbjct: 546 VLMACGTIKSLLFGREVHAQIIKSNIHTNIYVGST-LVWFYCKCKEYSYAFKVLQYMPFR 604
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W A++SG + L + L E+ + L P+++T+ +KAC + G +
Sbjct: 605 DVVSWTAIISGCARLGLEHEALEFLQEMMEEGVL-PNSYTYSSALKACAELEAPIQGKLI 663
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A+K +VFV++ALI MY KC +V + ++F+ MPERN+VSW S+I ++ NG +
Sbjct: 664 HSYASKTPASSNVFVNSALIYMYSKCGYVADAFQVFDNMPERNVVSWESMILAYARNGHA 723
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L+ +M EGF+ D TV+
Sbjct: 724 REALKLMHRMQA--EGFVVDDYIHTTVI 749
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 101/192 (52%), Gaps = 5/192 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ CG D+E+GK++H + S + I++ ++ Y+ CG + R FD + R
Sbjct: 345 IMNLCGRRVDLELGKQIHARILKSRW--RNLIVDNAVVHFYAKCGNISSAFRAFDCMAER 402
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +++ ++ + LS+ ++ SD P+ +T +KACG + FG+ +
Sbjct: 403 DVICWTTMITACSQQGFGHEALSMLSQMLSDG-FYPNEYTICSALKACGENKALKFGTQL 461
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K DVF+ +L+ MY KC + + +F+ M RN +W SII G++ NGF
Sbjct: 462 HGAIIKKICKSDVFIGTSLVDMYAKCGVMVDSKVVFDRMRIRNTATWTSIISGYARNGFG 521
Query: 283 CE--SFDLLIKM 292
E SF L+KM
Sbjct: 522 EEATSFFRLMKM 533
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 6/197 (3%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
E+G RVH +V ++ N LI Y G +RRVFD + +N W A++ G
Sbjct: 256 EVG-RVHTIVLKFFIHPVTYVDNN-LICSYLRLGKLAQARRVFDGMSRKNTVTWTAIIDG 313
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
+ K L + +F + + ++ F C++ CG D+ G +H K
Sbjct: 314 YLKFNLDDEAFKLFQDCVKHG-VPANSKMFVCIMNLCGRRVDLELGKQIHARILK-SRWR 371
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
++ V NA++ Y KC + + F+ M ER+++ W ++I S+ GF E+ +L +M+
Sbjct: 372 NLIVDNAVVHFYAKCGNISSAFRAFDCMAERDVICWTTMITACSQQGFGHEALSMLSQML 431
Query: 294 GCEEGFIPDVITVVTVL 310
+GF P+ T+ + L
Sbjct: 432 S--DGFYPNEYTICSAL 446
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 4/135 (2%)
Query: 81 NKALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
++AL LQE + L + L+AC + GK +H S + SN F+ N+
Sbjct: 623 HEALEFLQEMMEEGVLPNSYTYSSALKACAELEAPIQGKLIHSYASKTPASSNVFV-NSA 681
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI MYS CG+ D+ +VFD++ RN+ W +++ + +N + L + + ++
Sbjct: 682 LIYMYSKCGYVADAFQVFDNMPERNVVSWESMILAYARNGHAREALKLMHRMQAEG-FVV 740
Query: 199 DNFTFPCVIKACGGI 213
D++ VI ACGG+
Sbjct: 741 DDYIHTTVISACGGV 755
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 114/222 (51%), Gaps = 8/222 (3%)
Query: 91 LHNADLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFP 149
LH L T +LQ+ + +GK++H S T F N + T+L+ MYS+
Sbjct: 27 LHTPPLTSTTYSTILQS---SNSLTLGKQLHSH-SIKTGFYNHNFVQTKLLQMYSINSSF 82
Query: 150 LDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT-ELKPDNFTFPCVIK 208
D+ +FD + +NL W A++ L+ +F E D K D F FP V+
Sbjct: 83 EDAWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLN 142
Query: 209 ACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS 268
C G+ D+ G VHGM K G + +V+V NALI MYGKC ++E K+ E M +++ VS
Sbjct: 143 ICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVS 202
Query: 269 WNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
WNSII NG E+ DLL M+ E P+V+T V+
Sbjct: 203 WNSIITACVANGVVYEALDLLENMLLSE--LEPNVVTWSAVI 242
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 39/243 (16%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL--- 159
+L AC K + +GK +H + FSN F+ N L+ MY CG + ++F
Sbjct: 276 VLPACSRMKWLFVGKELHGYIVRHELFSNGFVANA-LVGMYRRCGDMKSAFKIFSKFARK 334
Query: 160 -------------------KTRNLF-------------QWNALVSGFTKNELYTDVLSIF 187
K + LF WN ++SG N ++ D L +F
Sbjct: 335 CAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLF 394
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+L + ++PD+FT ++ + + G +H +A GL + FV AL+ MY K
Sbjct: 395 RDLLMEG-IEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCK 453
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
C + F+ + ER+ +WN++I G++ + +L+ +M +GF P+V T
Sbjct: 454 CNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMK--SDGFEPNVYTWN 511
Query: 308 TVL 310
++L
Sbjct: 512 SIL 514
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 107/239 (44%), Gaps = 39/239 (16%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V+L C D+E+G++VH +V +N ++ N LI MY CG ++++V + +
Sbjct: 139 VVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNA-LIDMYGKCGSLDEAKKVLEGMTQ 197
Query: 162 R-----------------------------------NLFQWNALVSGFTKNELYTDVLSI 186
+ N+ W+A++ GF+ N + + +
Sbjct: 198 KDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVEL 257
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
F + + PD T V+ AC + + G +HG + L + FV+NAL+ MY
Sbjct: 258 FARMVG-AGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYR 316
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
+C ++ K+F + S+N++I G+ ENG ++ +L +M +EG D I+
Sbjct: 317 RCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQME--QEGVERDRIS 373
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 39/233 (16%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
I GK +H + SN F+ L+ MY C + ++ FD + R+ WNAL+S
Sbjct: 422 IRQGKEIHSIAIVKGLQSNSFV-GGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALIS 480
Query: 173 GFTK-----------------------------------NELYTDVLSIFVELSSDTELK 197
G+ + N+ Y + +F E+ + L+
Sbjct: 481 GYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQV-SSLR 539
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
PD +T ++ AC +A + G VH + + G D + L+ MY KC ++ ++
Sbjct: 540 PDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQV 599
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + NLV N+++ ++ +G E + +M+ + PD +T ++VL
Sbjct: 600 YNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRML--DSRVRPDHVTFLSVL 650
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 95/204 (46%), Gaps = 7/204 (3%)
Query: 76 ESKSLNKALSLLQENLHNADLKE---ATGVLLQACGHEKDIEIGKRVHELVSASTQFSND 132
E+K + A+ L E + + L+ G++L AC I GK+VH S + +D
Sbjct: 519 ENKQYDLAMQLFNE-MQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAY-SIRAGYDSD 576
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
I L+ MY+ CG +V++ + NL NA+++ + + + + IF +
Sbjct: 577 AHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRM-L 635
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
D+ ++PD+ TF V+ +C + G + + + ++ + + ++
Sbjct: 636 DSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLMETYNITPTLKHYTCMVDLLSRAGKLD 695
Query: 253 EMVKLFEVMP-ERNLVSWNSIICG 275
E +L + MP E + V+W++++ G
Sbjct: 696 EAYQLIKNMPMEADSVTWSALLGG 719
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 115/209 (55%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++++C I +G+ VH + + D + + LI MY+ G D+R+VFD + R
Sbjct: 152 VVKSCAALGAIALGRLVHR-TARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAER 210
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN ++ G+ K + + +F ++ + + +P+ T C + +D+ FG +
Sbjct: 211 DCVLWNVMMDGYVKAGSVSSAVELFGDMRA-SGCEPNFATLACFLSVSATESDLFFGVQL 269
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A K GL +V V+N L++MY KC +++ KLF +MP +LV+WN +I G +NGF
Sbjct: 270 HTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFV 329
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ L M + G PD +T+V++LP
Sbjct: 330 DQALLLFCDMQ--KSGIRPDSVTLVSLLP 356
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 111/212 (52%), Gaps = 4/212 (1%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A +L AC +++G+ +H + + + + L+ MY+ CG S +F
Sbjct: 451 AIASVLPACASMAAMKLGQELHSY-ALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSK 509
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ ++ WN+++S F +N + L++F E+ + +K N T V+ AC + + +
Sbjct: 510 ISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEG-VKYSNVTISSVLSACASLPAIYY 568
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G +HG+ K + D+F +ALI MYGKC +E ++FE MPE+N VSWNSII +
Sbjct: 569 GKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGA 628
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G ES LL M EEGF D +T + ++
Sbjct: 629 YGLVKESVSLLRHMQ--EEGFKADHVTFLALV 658
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 6/203 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL--- 159
+L+ C + +G +VH + + D + TRL+ MY L D+ VF SL
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK-PDNFTFPCVIKACGGIADVGF 218
WN L+ G T Y L ++++ + PD+ TFP V+K+C + +
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G VH A +GL GD+FV +ALI MY + + ++F+ M ER+ V WN ++ G+ +
Sbjct: 165 GRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVK 224
Query: 279 NGFSCESFDLL--IKMMGCEEGF 299
G + +L ++ GCE F
Sbjct: 225 AGSVSSAVELFGDMRASGCEPNF 247
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 100/195 (51%), Gaps = 4/195 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK +H + + + F+++ L+ +Y C ++ V+DS K ++ + ++SG+
Sbjct: 367 GKELHGYIVRNCVHMDVFLVSA-LVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYV 425
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
N + + + +F L + ++P+ V+ AC +A + G +H A K G
Sbjct: 426 LNGMSQEAVKMFRYLL-EQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRC 484
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+V +AL+ MY KC ++ +F + ++ V+WNS+I F++NG E+ +L +M C
Sbjct: 485 YVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREM--C 542
Query: 296 EEGFIPDVITVVTVL 310
EG +T+ +VL
Sbjct: 543 MEGVKYSNVTISSVL 557
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 100/202 (49%), Gaps = 4/202 (1%)
Query: 110 EKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNA 169
E D+ G ++H L S + NT L++MY+ C D ++F + +L WN
Sbjct: 260 ESDLFFGVQLHTLAVKYGLESEVAVANT-LVSMYAKCKCLDDGWKLFGLMPRDDLVTWNG 318
Query: 170 LVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM 229
++SG +N L +F ++ + ++PD+ T ++ A + G +HG +
Sbjct: 319 MISGCVQNGFVDQALLLFCDMQK-SGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRN 377
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL 289
+ DVF+ +AL+ +Y KC V +++ ++V +++I G+ NG S E+ +
Sbjct: 378 CVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMF 437
Query: 290 IKMMGCEEGFIPDVITVVTVLP 311
++ E+G P+ + + +VLP
Sbjct: 438 RYLL--EQGIRPNAVAIASVLP 457
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 96/172 (55%), Gaps = 3/172 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+IT Y G +R++FD + R+ W A++SG+ +N Y + L++FVE+ D E
Sbjct: 331 MITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGE-SS 389
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ TF C + C IA + G VHG K G FV NAL+ MY KC +E +F
Sbjct: 390 NRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVF 449
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E + E+++VSWN++I G++ +GF ++ L M + G PD IT+V VL
Sbjct: 450 EGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMK--KAGVKPDEITMVGVL 499
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 40/275 (14%)
Query: 38 HSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKAL--SLLQENLHNAD 95
H L + +K +S +A + + G F+ E + + N LL +HN
Sbjct: 128 HKLFDLMPKKDVVSWNAMLSGYAQNG--FVDEAREVFNKMPHRNSISWNGLLAAYVHNGR 185
Query: 96 LKEATGVLLQACGHE---KDIEIGKRVHE--LVSASTQFSN----DFIINTRLITMYSLC 146
LKEA + E + +G V L A F D I +I+ Y+
Sbjct: 186 LKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQV 245
Query: 147 GFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCV 206
G ++R+F+ R++F W A+VSG+ +N + + F E+ E+ + V
Sbjct: 246 GDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYV 305
Query: 207 IKACGGIADVGFGSGVHGMAAKMGLIGDVFVS---------NALIAMYGKCAFVEEMVKL 257
KM + G++F + N +I YG+ + + KL
Sbjct: 306 ------------------QYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKL 347
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
F++MP+R+ VSW +II G+++NG E+ ++ ++M
Sbjct: 348 FDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEM 382
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 125 ASTQFSN-DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDV 183
+S +F + D + + I+ + G + RVF+S+ R+ +NA++SG+ +N ++
Sbjct: 37 SSVKFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLA 96
Query: 184 LSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIA 243
+F ++ P+ F + G + + G H + M DV NA+++
Sbjct: 97 RDLFDKM-------PERDLFSWNVMLTGYVRNRRLGE-AHKLFDLMPK-KDVVSWNAMLS 147
Query: 244 MYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
Y + FV+E ++F MP RN +SWN ++ + NG
Sbjct: 148 GYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNG 184
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 6/173 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L C +E+GK+VH V F + L+ MY CG ++ VF+ ++ ++
Sbjct: 398 LSTCADIAALELGKQVHGQV-VKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKD 456
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGSG 221
+ WN +++G+ ++ L +F E +KPD T V+ AC G+ D G
Sbjct: 457 VVSWNTMIAGYARHGFGRQALVLF-ESMKKAGVKPDEITMVGVLSACSHSGLIDRG-TEY 514
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
+ M + +I + G+ +EE L MP + SW +++
Sbjct: 515 FYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALL 567
>gi|242096754|ref|XP_002438867.1| hypothetical protein SORBIDRAFT_10g027503 [Sorghum bicolor]
gi|241917090|gb|EER90234.1| hypothetical protein SORBIDRAFT_10g027503 [Sorghum bicolor]
Length = 610
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 116/210 (55%), Gaps = 6/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G ++ A G+ K G+ H V + + I+ + + MY+ CG +D+++VFD +K
Sbjct: 250 GSMMTALGNLKRARQGREAHAQV-LTRGLCGNVIVESSTLDMYAKCGMMVDAQKVFDRMK 308
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN W AL+ G+ ++ + VLS+F ++ ++ + D ++ ++++C G++ V G
Sbjct: 309 VRNAVSWCALLGGYCQSGKHEMVLSLFRQMYTEDD---DWYSLGTLLRSCAGLSAVKLGK 365
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H +M GDV V +AL+ +Y KC VE ++F RN+++WN++ICG ++NG
Sbjct: 366 EIHCRFMRMRGCGDVIVESALVDLYAKCGAVEYAYRVFRRSSVRNMITWNAMICGCAQNG 425
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L +M+ E PD ++ + VL
Sbjct: 426 HGERAISLFDEMV--REEVKPDYVSFIGVL 453
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 92/176 (52%), Gaps = 1/176 (0%)
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNL 164
+AC +D+ G VH + +++D ++ + L+ MY G P D+RR F+ ++ +
Sbjct: 152 KACAVLRDLRAGACVHG-TTVVRGYADDGVVLSALVDMYGHSGAPGDARRAFEEMRAPDG 210
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
+ +L+S F +N+ + + L F + + + PD TF ++ A G + G H
Sbjct: 211 ICYTSLISAFVRNDWFDEALRWFQAMLATDGVYPDGCTFGSMMTALGNLKRARQGREAHA 270
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
GL G+V V ++ + MY KC + + K+F+ M RN VSW +++ G+ ++G
Sbjct: 271 QVLTRGLCGNVIVESSTLDMYAKCGMMVDAQKVFDRMKVRNAVSWCALLGGYCQSG 326
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 5/202 (2%)
Query: 74 CEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
C+ K LSL ++ D + G LL++C +++GK +H + D
Sbjct: 323 CQSGKH-EMVLSLFRQMYTEDDDWYSLGTLLRSCAGLSAVKLGKEIH-CRFMRMRGCGDV 380
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
I+ + L+ +Y+ CG + RVF RN+ WNA++ G +N +S+F E+ +
Sbjct: 381 IVESALVDLYAKCGAVEYAYRVFRRSSVRNMITWNAMICGCAQNGHGERAISLFDEMVRE 440
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
E+KPD +F V+ AC V G + M+ G+ + N ++ + + +E
Sbjct: 441 -EVKPDYVSFIGVLFACSHTGMVEEGRNYFNSMSKDYGIPPGIEHYNCIVDLLSRVELLE 499
Query: 253 EMVKLFEVMPERNLVS-WNSII 273
E L R+ S W +I+
Sbjct: 500 EAEDLVNKSQFRDDSSLWAAIL 521
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 6/197 (3%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
+G +H + + ++ ++ N L L + R FD L R++ +++++
Sbjct: 53 RLGYSLHARAARAGLLADRYLANALLAFYVRLPDHLPHALRAFDDLPRRDVVAHSSVLAA 112
Query: 174 FTKNELYTDVLSIFVELSS-----DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK 228
F + L L +++ D ++ P KAC + D+ G+ VHG
Sbjct: 113 FLRAGLPRRALLQLRTMAAGGYGADDDVAPSAHALSASAKACAVLRDLRAGACVHGTTVV 172
Query: 229 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
G D V +AL+ MYG + + FE M + + + S+I F N + E+
Sbjct: 173 RGYADDGVVLSALVDMYGHSGAPGDARRAFEEMRAPDGICYTSLISAFVRNDWFDEALRW 232
Query: 289 LIKMMGCEEGFIPDVIT 305
M+ +G PD T
Sbjct: 233 FQAMLA-TDGVYPDGCT 248
>gi|302802776|ref|XP_002983142.1| hypothetical protein SELMODRAFT_117546 [Selaginella moellendorffii]
gi|300149295|gb|EFJ15951.1| hypothetical protein SELMODRAFT_117546 [Selaginella moellendorffii]
Length = 544
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 112/208 (53%), Gaps = 7/208 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C K ++ GK++H + S Q D I+ LI MY CG D++R+FD + +R
Sbjct: 13 VLRVCAKNKALQQGKKIHSYIRDSGQ-EQDRILGNHLIEMYLKCGSLRDAQRMFDEMVSR 71
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W +++S +++ Y L +F + ++ +KPDN TF V+ CG ++ + G +
Sbjct: 72 DAILWTSMISAYSERGHYKTALKLFQRMQGES-VKPDNVTFVTVLNCCGKMSALQEGKLI 130
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G D+ V AL+ MYGKC + + K+FE + +++++WN+++ + ++
Sbjct: 131 HSQLTGNGFENDLIVKTALLNMYGKCGSLTDARKVFEEIQGKDIITWNAMLSVYVQHSAY 190
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L KM P V T VTV+
Sbjct: 191 EEALELYRKME-----LTPSVSTFVTVI 213
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 107/194 (55%), Gaps = 7/194 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L CG ++ GK +H ++ + F ND I+ T L+ MY CG D+R+VF+ ++ +
Sbjct: 114 VLNCCGKMSALQEGKLIHSQLTGNG-FENDLIVKTALLNMYGKCGSLTDARKVFEEIQGK 172
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA++S + ++ Y + L ++ ++ EL P TF VI AC G + G V
Sbjct: 173 DIITWNAMLSVYVQHSAYEEALELYRKM----ELTPSVSTFVTVINACAGATALEDGRQV 228
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + GL + VS+AL+ MYGKC +E+ K+F E + V+W +I +++ S
Sbjct: 229 HAVVTARGLETEDAVSSALLNMYGKCGSLEDAAKVFWKRREYDDVAWAHMISFYTQWHRS 288
Query: 283 CESFDL--LIKMMG 294
E+ L L+++ G
Sbjct: 289 KEALGLFRLMRLEG 302
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 7/209 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC +E G++VH +V+A + D +++ L+ MY CG D+ +VF +
Sbjct: 212 VINACAGATALEDGRQVHAVVTARGLETED-AVSSALLNMYGKCGSLEDAAKVFWKRREY 270
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W ++S +T+ + L +F L ++ D F F + AC G + G +
Sbjct: 271 DDVAWAHMISFYTQWHRSKEALGLF-RLMRLEGVRVDKFAFTTTLSACNGAECLAEGRLL 329
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G DV V +ALI MYG+C + +LF+ +P +N++ +++I +G
Sbjct: 330 HAGIEESGFESDVVVRSALIHMYGRCGLYDAAWELFQSVPTKNVLLSSAMIATCERHGHW 389
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E D+ + +P +T+++VL
Sbjct: 390 RELLDVYQNVQS-----VPYKLTIISVLK 413
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 88/177 (49%), Gaps = 5/177 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + + G+ +H + S F +D ++ + LI MY CG + +F S+ T+N
Sbjct: 314 LSACNGAECLAEGRLLHAGIEESG-FESDVVVRSALIHMYGRCGLYDAAWELFQSVPTKN 372
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ +A+++ ++ + ++L ++ + S P T V+KAC + ++ G VH
Sbjct: 373 VLLSSAMIATCERHGHWRELLDVYQNVQS----VPYKLTIISVLKACAELQELERGKAVH 428
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
L D + AL+ MY KC +E+ LF+ P+++ WN+++ + + G
Sbjct: 429 ESIKGKDLYQDGGIREALLGMYCKCGALEDAQNLFDRTPDKSTAFWNALLDAYVKQG 485
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
K D+ T+ V++ C + G +H G D + N LI MY KC + + +
Sbjct: 4 KTDSATYARVLRVCAKNKALQQGKKIHSYIRDSGQEQDRILGNHLIEMYLKCGSLRDAQR 63
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ M R+ + W S+I +SE G + L +M G E PD +T VTVL
Sbjct: 64 MFDEMVSRDAILWTSMISAYSERGHYKTALKLFQRMQG--ESVKPDNVTFVTVL 115
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Query: 74 CEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
CE + L + Q N+ + K +L+AC +++E GK VHE + + D
Sbjct: 383 CERHGHWRELLDVYQ-NVQSVPYKLTIISVLKACAELQELERGKAVHESIKGKDLY-QDG 440
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
I L+ MY CG D++ +FD ++ WNAL+ + K +F ++ ++
Sbjct: 441 GIREALLGMYCKCGALEDAQNLFDRTPDKSTAFWNALLDAYVKQGQLERASELFEQMQAN 500
Query: 194 TELKPDNFTFPCV 206
+++ + T CV
Sbjct: 501 -DVEANEITVACV 512
>gi|357128066|ref|XP_003565697.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Brachypodium distachyon]
Length = 564
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 112/210 (53%), Gaps = 10/210 (4%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+ L AC ++ +G+++H L F+ + + LI MY C LD+RR+FD +
Sbjct: 181 IALHACASIANLCVGQQLHVLC-LRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPE 239
Query: 162 RNLFQWNALVSGFTK-NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RNL WN +++ +++ N L + ++L + L+P+ FT + AC G+A + FG
Sbjct: 240 RNLVTWNTMIAWYSQCNHL------MALQLLREMNLQPNCFTLTSITSACAGLASLRFGQ 293
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VHG A + D+ + NAL+ MY KC + K+F +M ++ +SW S+I G+ NG
Sbjct: 294 QVHGAALRRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNG 353
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ ES L M+ G PD + + ++
Sbjct: 354 YANESIQLFTSMI--HAGVHPDHVVFLGLI 381
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 76/145 (52%), Gaps = 9/145 (6%)
Query: 144 SLC--GFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF 201
SLC G +R VFD + R++ W A++SG+ N ++ L +F + + + P+ F
Sbjct: 12 SLCAGGALRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLA-AGVGPNEF 70
Query: 202 TFPCVIKAC-GGIADVGFG-SGVHGMAAKMGLIGDVFVSNALIAMYGKC---AFVEEMVK 256
T V+ AC GG AD G S +H +A + G+ +V NALI Y C VEE K
Sbjct: 71 TLSSVLTACRGGAADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASCEEGVGVEESRK 130
Query: 257 LFEVMPE-RNLVSWNSIICGFSENG 280
LF+ + R SW S++ G+S G
Sbjct: 131 LFDALGSGRTAASWTSMVAGYSRWG 155
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ MP+R++V+W +++ G++ NG + DL +M+ G P+ T+ +VL
Sbjct: 25 VFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLA--AGVGPNEFTLSSVL 76
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 122/208 (58%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C + + G+++H L+ S+ F+ NT LI MY+ CG +RRVFD + R
Sbjct: 130 ILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNT-LIHMYANCGEVEVARRVFDEMSER 188
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN++ +G+TK+ + +V+ +F E+ + +++ D T V+ ACG +AD+ G +
Sbjct: 189 NVRTWNSMFAGYTKSGNWEEVVKLFHEML-ELDIRFDEVTLVSVLTACGRLADLELGEWI 247
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ + GL G+ + +L+ MY KC V+ +LF+ M R++V+W+++I G+S+
Sbjct: 248 NRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRC 307
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL +M + P+ IT+V++L
Sbjct: 308 REALDLFHEMQ--KANIDPNEITMVSIL 333
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG D+E+G+ ++ V N +I T L+ MY+ CG +RR+FD + R
Sbjct: 231 VLTACGRLADLELGEWINRYVEEKGLKGNPTLI-TSLVDMYAKCGQVDTARRLFDQMDRR 289
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+A++SG+++ + L +F E+ + P+ T ++ +C + + G V
Sbjct: 290 DVVAWSAMISGYSQASRCREALDLFHEMQK-ANIDPNEITMVSILSSCAVLGALETGKWV 348
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K + V + AL+ Y KC VE +++F MP +N++SW +I G + NG
Sbjct: 349 HFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQG 408
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ + M+ E+ P+ +T + VL
Sbjct: 409 KKALEYFYLML--EKNVEPNDVTFIGVL 434
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 86/156 (55%), Gaps = 3/156 (1%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
+F + + +N ++ GFT + + + +F E+ ++ ++PD FTFPC++K C +
Sbjct: 80 IFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENS-VQPDEFTFPCILKVCSRLQ 138
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+ G +H + K G FV N LI MY C VE ++F+ M ERN+ +WNS+
Sbjct: 139 ALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFA 198
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G++++G E L +M+ + F D +T+V+VL
Sbjct: 199 GYTKSGNWEEVVKLFHEMLELDIRF--DEVTLVSVL 232
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 115/209 (55%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++++C I +G+ VH + + D + + LI MY+ G D+R+VFD + R
Sbjct: 152 VVKSCAALGAIALGRLVHR-TARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAER 210
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN ++ G+ K + + +F ++ + + +P+ T C + +D+ FG +
Sbjct: 211 DCVLWNVMMDGYVKAGSVSSAVELFGDMRA-SGCEPNFATLACFLSVSATESDLFFGVQL 269
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A K GL +V V+N L++MY KC +++ KLF +MP +LV+WN +I G +NGF
Sbjct: 270 HTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFV 329
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ L M + G PD +T+V++LP
Sbjct: 330 DQALLLFCDMQ--KSGIRPDSVTLVSLLP 356
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 111/212 (52%), Gaps = 4/212 (1%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A +L AC +++G+ +H + + + + L+ MY+ CG S +F
Sbjct: 451 AIASVLPACASMAAMKLGQELHSY-ALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSK 509
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ ++ WN+++S F +N + L++F E+ + +K N T V+ AC + + +
Sbjct: 510 ISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEG-VKYSNVTISSVLSACASLPAIYY 568
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G +HG+ K + D+F +ALI MYGKC +E ++FE MPE+N VSWNSII +
Sbjct: 569 GKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGA 628
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G ES LL M EEGF D +T + ++
Sbjct: 629 YGLVKESVSLLRHMQ--EEGFKADHVTFLALV 658
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 6/203 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL--- 159
+L+ C + +G +VH + + D + TRL+ MY L D+ VF SL
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK-PDNFTFPCVIKACGGIADVGF 218
WN L+ G T Y L ++++ + PD+ TFP V+K+C + +
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G VH A +GL GD+FV +ALI MY + + ++F+ M ER+ V WN ++ G+ +
Sbjct: 165 GRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVK 224
Query: 279 NGFSCESFDLL--IKMMGCEEGF 299
G + +L ++ GCE F
Sbjct: 225 AGSVSSAVELFGDMRASGCEPNF 247
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 100/195 (51%), Gaps = 4/195 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK +H + + + F+++ L+ +Y C ++ V+DS K ++ + ++SG+
Sbjct: 367 GKELHGYIVRNCVHMDVFLVSA-LVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYV 425
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
N + + + +F L + ++P+ V+ AC +A + G +H A K G
Sbjct: 426 LNGMSQEAVKMFRYLL-EQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRC 484
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+V +AL+ MY KC ++ +F + ++ V+WNS+I F++NG E+ +L +M C
Sbjct: 485 YVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREM--C 542
Query: 296 EEGFIPDVITVVTVL 310
EG +T+ +VL
Sbjct: 543 MEGVKYSNVTISSVL 557
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 100/202 (49%), Gaps = 4/202 (1%)
Query: 110 EKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNA 169
E D+ G ++H L S + NT L++MY+ C D ++F + +L WN
Sbjct: 260 ESDLFFGVQLHTLAVKYGLESEVAVANT-LVSMYAKCKCLDDGWKLFGLMPRDDLVTWNG 318
Query: 170 LVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM 229
++SG +N L +F ++ + ++PD+ T ++ A + G +HG +
Sbjct: 319 MISGCVQNGFVDQALLLFCDMQK-SGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRN 377
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL 289
+ DVF+ +AL+ +Y KC V +++ ++V +++I G+ NG S E+ +
Sbjct: 378 CVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMF 437
Query: 290 IKMMGCEEGFIPDVITVVTVLP 311
++ E+G P+ + + +VLP
Sbjct: 438 RYLL--EQGIRPNAVAIASVLP 457
>gi|218199241|gb|EEC81668.1| hypothetical protein OsI_25221 [Oryza sativa Indica Group]
Length = 931
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 9/203 (4%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+++H L + + ++ L+ +YS CG P + +F + R+L WN V
Sbjct: 82 GRQLHALAAKLGLAPSHTVVANSLLHLYSSCGLPGAALDLFRRIPDRSLVSWNTAVDALV 141
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK-MGLIG- 233
N + L +F E+ DTEL PD +T V+ AC G + G H + + +G G
Sbjct: 142 GNGDHLAALDLFREMQRDTELAPDAYTVQSVLGACAGAGALSLGVYAHALLLRELGGDGD 201
Query: 234 ------DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFD 287
D+ ++N+L+ +YGKC +E ++F+ MP R+L SWN +I + +G CES +
Sbjct: 202 GEAVSRDMLINNSLVDLYGKCGALELAQQVFDRMPARDLASWNVMILTLANHGRVCESVE 261
Query: 288 LLIKMMGCEEGFIPDVITVVTVL 310
L +M E+ P+ IT V VL
Sbjct: 262 LFDRMTQVEK-MAPNAITFVAVL 283
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI-GD 234
+ +L L +F L S P + + P V+ A ++ + G +H +AAK+GL
Sbjct: 39 RADLAHRALLLFRSLQSTPSPPPPHVSLPAVLSAAAFLSALPEGRQLHALAAKLGLAPSH 98
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
V+N+L+ +Y C + LF +P+R+LVSWN+ + NG + DL +M
Sbjct: 99 TVVANSLLHLYSSCGLPGAALDLFRRIPDRSLVSWNTAVDALVGNGDHLAALDLFREMQR 158
Query: 295 CEEGFIPDVITVVTVL 310
E PD TV +VL
Sbjct: 159 DTE-LAPDAYTVQSVL 173
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 28/211 (13%)
Query: 83 ALSLLQENLHNADL-KEATGV--LLQACGHEKDIEIGKRVHELV-------SASTQFSND 132
AL L +E + +L +A V +L AC + +G H L+ S D
Sbjct: 149 ALDLFREMQRDTELAPDAYTVQSVLGACAGAGALSLGVYAHALLLRELGGDGDGEAVSRD 208
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
+IN L+ +Y CG +++VFD + R+L WN ++ + + + +F ++
Sbjct: 209 MLINNSLVDLYGKCGALELAQQVFDRMPARDLASWNVMILTLANHGRVCESVELFDRMTQ 268
Query: 193 DTELKPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG---- 246
++ P+ TF V+ AC GG+ + G ++ D + I YG
Sbjct: 269 VEKMAPNAITFVAVLSACNHGGLVEEGR--------RYFAMMVDQYRIKPRIEHYGCMVD 320
Query: 247 ---KCAFVEEMVKLFEVMPER-NLVSWNSII 273
+ F+EE + + M R + + W S++
Sbjct: 321 LLARAGFIEEALDIVAGMNCRPDAIIWRSLL 351
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 119/211 (56%), Gaps = 7/211 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGF-PLDSRRVFDSLKT 161
+L A + +D+ G + H + S N + + LI +YS CG LD R+VFD +
Sbjct: 246 VLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHV-GSGLIDLYSKCGGCMLDCRKVFDEISN 304
Query: 162 RNLFQWNALVSGFTKNELYTD-VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+L WN ++SG++ E +D L F +L +PD+ + CVI AC ++ G
Sbjct: 305 PDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGH-RPDDCSLVCVISACSNMSSPSQGR 363
Query: 221 GVHGMAAKMGLIGD-VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
VHG+A K+ + + + V+NALIAMY KC + + LF+ MPE N VS+NS+I G++++
Sbjct: 364 QVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQH 423
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G +S L +M+ E GF P IT ++VL
Sbjct: 424 GMGFQSLHLFQRML--EMGFTPTNITFISVL 452
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 109/244 (44%), Gaps = 46/244 (18%)
Query: 103 LLQACGHEKDIEIGKRVHEL-----VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
L+ C +D+ GK +H L V ST SN F++ +YS C +RRVFD
Sbjct: 14 FLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLL------LYSKCRRLSAARRVFD 67
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL-----------------SSDTE----- 195
N+F +N L+S + K +F E+ DT+
Sbjct: 68 HTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQL 127
Query: 196 --------LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
L D FT +I ACG +VG +H ++ GL V V NALI Y K
Sbjct: 128 FLEMREAFLDMDGFTLSGIITACG--INVGLIRQLHALSVVTGLDSYVSVGNALITSYSK 185
Query: 248 CAFVEEMVKLFEVMPE-RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
F++E ++F + E R+ VSWNS++ + ++ ++ +L ++M G I D+ T+
Sbjct: 186 NGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEM--TVRGLIVDIFTL 243
Query: 307 VTVL 310
+VL
Sbjct: 244 ASVL 247
>gi|297795827|ref|XP_002865798.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311633|gb|EFH42057.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 701
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 109/193 (56%), Gaps = 8/193 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L++AC K I KRV+ + S F + + R++ M+ CG +D+RR+FD + R
Sbjct: 129 LVEACIRLKSIRCVKRVYGFI-ISNGFEPEKYMMNRILLMHVKCGMIIDARRLFDEMPER 187
Query: 163 NLFQWNALVSGFTKNELYTDVLSIF---VELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
NLF +N+++SGF Y + +F E SD E TF +++A G+ V G
Sbjct: 188 NLFSYNSIISGFVNFGNYEEAFELFKLMWEELSDCE----THTFAVMLRASAGLWSVYVG 243
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H A K+G++ + FVS LI MY KC +E+ FE MPE+ V+WN+I+ G++ +
Sbjct: 244 KQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFESMPEKTTVAWNNIVAGYALH 303
Query: 280 GFSCESFDLLIKM 292
G+S E+ LL +M
Sbjct: 304 GYSEEALCLLYEM 316
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 103/210 (49%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
V+L+A + +GK++H N F+ + LI MYS CG D+R F+S+
Sbjct: 228 AVMLRASAGLWSVYVGKQLHVCALKLGVVDNTFV-SCGLIDMYSKCGDIEDARCAFESMP 286
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ WN +V+G+ + + L + E+ D+ + D FT +I+ +A +
Sbjct: 287 EKTTVAWNNIVAGYALHGYSEEALCLLYEMR-DSGVSMDQFTLSIMIRISTRLAKLELTK 345
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H + G ++ + AL+ Y K V+ +F+ +P +N++SWN+++ G++ +G
Sbjct: 346 QAHASLIRSGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHG 405
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M+ + P+ +T + VL
Sbjct: 406 RGTDAVRLFERMIAAK--VAPNHVTFLAVL 433
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
T+ +++AC + + V+G G + ++ N ++ M+ KC + + +LF+ M
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFIISNGFEPEKYMMNRILLMHVKCGMIIDARRLFDEM 184
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
PERNL S+NSII GF G E+F+L K+M
Sbjct: 185 PERNLFSYNSIISGFVNFGNYEEAFELF-KLM 215
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 114/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++++C ++ G+ VH V F D + L+ +Y CG +++R+VFD ++ R
Sbjct: 117 VIKSCADLSALKHGRVVHGHVLVHG-FGLDVYVQAALVALYGKCGDLINARKVFDKIRER 175
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+++SG+ +N + + +F + +T ++PD+ TF V+ AC + G V
Sbjct: 176 SIVAWNSMISGYEQNGFAKEAIGLFDRMK-ETGVEPDSATFVSVLSACAHLGAFSLGCWV 234
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H GL +V + +LI MY +C V + ++F+ M ERN+V+W ++I G+ NG+
Sbjct: 235 HEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYG 294
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L +M G P+ IT V VL
Sbjct: 295 SQAVELFHEMR--RNGLFPNSITFVAVL 320
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
T+L+ + G +R++F ++ + F + +L+ +K+ ++ F + +
Sbjct: 48 TKLLNLACAAGSISYTRQIFLAVPNPDSFLFTSLIKSTSKSHNFSIYSLYFYSRMVLSNV 107
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
P N+TF VIK+C ++ + G VHG G DV+V AL+A+YGKC + K
Sbjct: 108 SPSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARK 167
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ + ER++V+WNS+I G+ +NGF+ E+ L +M E G PD T V+VL
Sbjct: 168 VFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMK--ETGVEPDSATFVSVL 219
>gi|218193846|gb|EEC76273.1| hypothetical protein OsI_13747 [Oryza sativa Indica Group]
Length = 602
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 115/209 (55%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++++C I +G+ VH + + D + + LI MY+ G D+R+VFD + R
Sbjct: 152 VVKSCAALGAIALGRLVHR-TARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAER 210
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN ++ G+ K + + +F ++ + + +P+ T C + +D+ FG +
Sbjct: 211 DCVLWNVMMDGYVKAGSVSSAVELFGDMRA-SGCEPNFATLACFLSVSATESDLFFGVQL 269
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A K GL +V V+N L++MY KC +++ KLF +MP +LV+WN +I G +NGF
Sbjct: 270 HTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFV 329
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ L M + G PD +T+V++LP
Sbjct: 330 DQALLLFCDMQ--KSGIRPDSVTLVSLLP 356
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 6/203 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL--- 159
+L+ C + +G +VH + + D + TRL+ MY L D+ VF SL
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK-PDNFTFPCVIKACGGIADVGF 218
WN L+ G T Y L ++++ + PD+ TFP V+K+C + +
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G VH A +GL GD+FV +ALI MY + + ++F+ M ER+ V WN ++ G+ +
Sbjct: 165 GRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVK 224
Query: 279 NGFSCESFDLL--IKMMGCEEGF 299
G + +L ++ GCE F
Sbjct: 225 AGSVSSAVELFGDMRASGCEPNF 247
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 100/195 (51%), Gaps = 4/195 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK +H + + + F+++ L+ +Y C ++ V+DS K ++ + ++SG+
Sbjct: 367 GKELHGYIVRNCVHMDVFLVSA-LVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYV 425
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
N + + + +F L + ++P+ V+ AC +A + G +H A K G
Sbjct: 426 LNGMSQEAVKMFRYLL-EQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRC 484
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+V +AL+ MY KC ++ +F + ++ V+WNS+I F++NG E+ +L +M C
Sbjct: 485 YVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREM--C 542
Query: 296 EEGFIPDVITVVTVL 310
EG +T+ +VL
Sbjct: 543 MEGVKYSNVTISSVL 557
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 100/202 (49%), Gaps = 4/202 (1%)
Query: 110 EKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNA 169
E D+ G ++H L S + NT L++MY+ C D ++F + +L WN
Sbjct: 260 ESDLFFGVQLHTLAVKYGLESEVAVANT-LVSMYAKCKCLDDGWKLFGLMPRDDLVTWNG 318
Query: 170 LVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM 229
++SG +N L +F ++ + ++PD+ T ++ A + G +HG +
Sbjct: 319 MISGCVQNGFVDQALLLFCDMQK-SGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRN 377
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL 289
+ DVF+ +AL+ +Y KC V +++ ++V +++I G+ NG S E+ +
Sbjct: 378 CVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMF 437
Query: 290 IKMMGCEEGFIPDVITVVTVLP 311
++ E+G P+ + + +VLP
Sbjct: 438 RYLL--EQGIRPNAVAIASVLP 457
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A +L AC +++G+ +H + + + + L+ MY+ CG S +F
Sbjct: 451 AIASVLPACASMAAMKLGQELHSY-ALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSK 509
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ ++ WN+++S F +N + L++F E+ + +K N T V+ AC + + +
Sbjct: 510 ISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEG-VKYSNVTISSVLSACASLPAIYY 568
Query: 219 GSGVHGMAAKMGLIGDV 235
G +HG+ K + D+
Sbjct: 569 GKEIHGVVIKGPIRADL 585
>gi|224145066|ref|XP_002325515.1| predicted protein [Populus trichocarpa]
gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa]
Length = 683
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 111/201 (55%), Gaps = 5/201 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL +C + K + GK++H + S F N ++ +L+T YS D+ + +
Sbjct: 47 LLYSCTNLKSLPQGKQLHAH-TISLGFENHLVLVPKLVTFYSSFSLLADAHTITVNSDIV 105
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WN L+S + N L+ + LS + E+ ++PDNFT+P V+KACG D+ FG V
Sbjct: 106 NPLPWNLLISSYVNNGLHGEALSAYREMVHKG-VRPDNFTYPSVLKACGEKLDLDFGREV 164
Query: 223 H-GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
H + A G +++V N+L++MYGK ++ +LF MPER+ VSWN II ++ G
Sbjct: 165 HESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGL 224
Query: 282 SCESFDLL--IKMMGCEEGFI 300
E+F+L +++ G E I
Sbjct: 225 WKEAFELFEEMRLAGAEVNII 245
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 42/268 (15%)
Query: 82 KALSLLQENLHNADLKE--ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
+ALS +E +H + +L+ACG + D++ G+ VHE ++A+ + ++ L
Sbjct: 125 EALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREVHESINAAYGHRWNLYVHNSL 184
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS-------- 191
++MY G +RR+F+ + R+ WN ++S + L+ + +F E+
Sbjct: 185 VSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLWKEAFELFEEMRLAGAEVNI 244
Query: 192 ----------------------------SDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
D +L P + AC I + G+ +H
Sbjct: 245 ITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDP--VAMIIGLGACSHIGAIKLGTVIH 302
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
A + G V NALI MY +C + LF+ + ++L +WNS++ G++ S
Sbjct: 303 ASAIRSCFDGFDNVRNALITMYSRCKDLRHADILFKSIKTKSLTTWNSMLSGYTHMDRSE 362
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ L +M+ G P+ +T+ ++LP
Sbjct: 363 EASFLFREMLF--SGIEPNYVTIASILP 388
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 11/242 (4%)
Query: 74 CEESKSLNKALSLL-QENLHNADLKEATGVL-LQACGHEKDIEIGKRVHE--LVSASTQF 129
C ++++ AL LL Q + DL ++ L AC H I++G +H + S F
Sbjct: 254 CVQTRNFKGALELLSQMRRCDIDLDPVAMIIGLGACSHIGAIKLGTVIHASAIRSCFDGF 313
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE 189
N + LITMYS C + +F S+KT++L WN+++SG+T + + +F E
Sbjct: 314 DN---VRNALITMYSRCKDLRHADILFKSIKTKSLTTWNSMLSGYTHMDRSEEASFLFRE 370
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH-GMAAKMGLIGDVFVSNALIAMYGKC 248
+ + ++P+ T ++ C +A++ G H + + G + + N+L+ MY +
Sbjct: 371 MLF-SGIEPNYVTIASILPHCARVANLQQGKEFHCYIMRREGFEDYLLLWNSLVEMYARS 429
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
V ++F+ + R+ V++ S+I G+ G + L +M+ + PD +T+V
Sbjct: 430 GKVLSAKRVFDSLRRRDKVTYTSLIAGYGIQGEGKTALKLFDEMI--KHRIKPDQVTMVA 487
Query: 309 VL 310
VL
Sbjct: 488 VL 489
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 82/173 (47%), Gaps = 3/173 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C +++ GK H + F + ++ L+ MY+ G L ++RVFDSL+ R
Sbjct: 386 ILPHCARVANLQQGKEFHCYIMRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRR 445
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ + +L++G+ L +F E+ +KPD T V+ AC V G+ +
Sbjct: 446 DKVTYTSLIAGYGIQGEGKTALKLFDEMIKH-RIKPDQVTMVAVLSACSHSGLVTEGNVL 504
Query: 223 -HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS-WNSII 273
M+ G++ V + ++ ++G+ + + K+ MP R + W +++
Sbjct: 505 FEKMSTLYGIVPAVEHFSCMVDLFGRAGLLNKAKKVITSMPYRPTTAMWATLV 557
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 113/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ CG E ++ +GK +H L+ S FS D T L MY+ C ++R+VFD + R
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSG-FSLDLFAMTGLENMYAKCRQVHEARKVFDRMPER 199
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN +V+G+++N + L + V L + LKP T V+ A + + G +
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEM-VNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEI 258
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A + G V ++ AL+ MY KC ++ LF+ M ERN+VSWNS+I + +N
Sbjct: 259 HGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENP 318
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + KM+ +EG P ++V+ L
Sbjct: 319 KEAMVIFQKML--DEGVKPTDVSVMGAL 344
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 122/227 (53%), Gaps = 8/227 (3%)
Query: 86 LLQENLHNADLKE-ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYS 144
L Q N A++ E +LL+ C K++ + + L+ + + + + T+L++++
Sbjct: 25 LSQRNYIPANVYEHPAALLLERCSSLKEL---RHILPLIFKNGLY-QEHLFQTKLVSLFC 80
Query: 145 LCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFP 204
G ++ RVF+ + + + ++ GF K L FV + D E++P + F
Sbjct: 81 RYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDD-EVEPVVYNFT 139
Query: 205 CVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
++K CG A++ G +HG+ K G D+F L MY KC V E K+F+ MPER
Sbjct: 140 YLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPER 199
Query: 265 NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+LVSWN+I+ G+S+NG + + +++ M CEE P IT+V+VLP
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVNLM--CEENLKPSFITIVSVLP 244
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 110/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L A + I IGK +H + F + I T L+ MY+ CG +R +FD + R
Sbjct: 242 VLPAVSALRLIRIGKEIHGY-AMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLER 300
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN+++ + +NE + + IF ++ D +KP + + + AC + D+ G +
Sbjct: 301 NVVSWNSMIDAYVQNENPKEAMVIFQKML-DEGVKPTDVSVMGALHACADLGDLERGRFI 359
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H ++ ++ L +V V N+LI+MY KC V+ +F + R +VSWN++I GF++NG
Sbjct: 360 HKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRP 419
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + +M PD T V+V+
Sbjct: 420 IEALNYFSQMQA--RTVKPDTFTYVSVI 445
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 114/208 (54%), Gaps = 6/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC D+E G+ +H+L S + + + LI+MY C + +F L++R
Sbjct: 344 LHACADLGDLERGRFIHKL-SVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 402
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WNA++ GF +N + L+ F ++ + T +KPD FT+ VI A ++ +H
Sbjct: 403 IVSWNAMILGFAQNGRPIEALNYFSQMQART-VKPDTFTYVSVITAIAELSITHHAKWIH 461
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G+ + L +VFV+ AL+ MY KC + +F++M ER++ +WN++I G+ +G
Sbjct: 462 GVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGK 521
Query: 284 ESFDLLIKMMGCEEGFI-PDVITVVTVL 310
+ +L +M ++G I P+ +T ++V+
Sbjct: 522 AALELFEEM---QKGTIRPNGVTFLSVI 546
>gi|296084064|emb|CBI24452.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 117/213 (54%), Gaps = 9/213 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC--GFPLDSRRVFDSLK 160
LLQ C K I K +H + N F+ +L+ Y+ C D+R+VFD L
Sbjct: 13 LLQRCKGTKTI---KSIHAQIIIGGFEENPFL-GAKLVGKYAQCYESNIEDARKVFDCLP 68
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++F WN ++ G+ + + L+I+ E + + + +TFP V+KACG + D G
Sbjct: 69 DRDVFVWNTIIQGYANLGPFMEALNIY-EYMRCSGVAANRYTFPFVLKACGAMKDGKKGQ 127
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG K GL D+FV NAL+A Y KC + ++F+++ E+++V+WNS+I G++ NG
Sbjct: 128 AIHGHVVKHGLDLDLFVGNALVAFYAKCNEIGASRRVFDMISEKDIVTWNSMISGYAING 187
Query: 281 FSCESFDLLIKMMGCEEG--FIPDVITVVTVLP 311
+ ++ L M+ + + PD T+V +LP
Sbjct: 188 CADDALVLFHNMLQVQGDTVYAPDSATLVAILP 220
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 106/211 (50%), Gaps = 6/211 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG KD + G+ +H V D + L+ Y+ C SRRVFD + +
Sbjct: 113 VLKACGAMKDGKKGQAIHGHV-VKHGLDLDLFVGNALVAFYAKCNEIGASRRVFDMISEK 171
Query: 163 NLFQWNALVSGFTKNELYTDVLSIF---VELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
++ WN+++SG+ N D L +F +++ DT PD+ T ++ AC A + G
Sbjct: 172 DIVTWNSMISGYAINGCADDALVLFHNMLQVQGDTVYAPDSATLVAILPACAQAAAIQEG 231
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H K G+ D + + LIAMY C + +F+ + ++N+V WN+II + +
Sbjct: 232 LWIHSYVIKSGIELDAALGSGLIAMYANCGLLNSARDVFDRIDDKNIVVWNAIIRCYGMH 291
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + E+ + ++ + G PD + + +L
Sbjct: 292 GHADEALKMFSGLI--DSGLHPDGVIFLCLL 320
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 140/277 (50%), Gaps = 22/277 (7%)
Query: 41 RSIFKE---KSSLSLSAKTNNASTQGL--HFLQEITTLCEESKSLNKALSLLQENLHNAD 95
R+ F+E K+S++ +A N G L+ +CE S+S
Sbjct: 86 RAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCERSRSARPD------------ 133
Query: 96 LKEATGVLLQACGHEKDIEIGKRVHELVS-ASTQFSNDFIINTRLITMYSLCGFPLDSRR 154
K + + ++AC + +D+E G+ +HE++ + D ++ T L+ MYS CG ++R+
Sbjct: 134 -KFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEEARK 192
Query: 155 VFDSLK-TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
VFDS++ + WNA+++ + ++ L ++ + T+L P TF VI C +
Sbjct: 193 VFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAEL 252
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
+ + G +H ++ VSNAL+ MYGKC ++E + +F M ++ +SWN+II
Sbjct: 253 SALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTII 312
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +G S ++ LL + M +G P +T V +L
Sbjct: 313 SSYAYHGHSDQAL-LLYQEMDL-QGVKPTEVTFVGLL 347
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 6/202 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
I+ G+ +H S N ++ T +I+MY CG D+R F+ L+ +N WNA+++
Sbjct: 47 IDQGREIHRYARISGLLPN-VVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMT 105
Query: 173 GFTKNELYTDVLSIFVELSSDTE-LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG- 230
+ + + L +F E+ + +PD F+F I+AC + D+ G +H M + G
Sbjct: 106 NYKLDGRDREALELFREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGK 165
Query: 231 -LIGDVFVSNALIAMYGKCAFVEEMVKLFE-VMPERNLVSWNSIICGFSENGFSCESFDL 288
L DV V AL+ MY KC +EE K+F+ + + + V WN++I ++++G ++ DL
Sbjct: 166 ELHKDVVVGTALLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDL 225
Query: 289 LIKMMGCEEGFIPDVITVVTVL 310
M + P T VTV+
Sbjct: 226 YRSMHDTTD-LAPKQGTFVTVI 246
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG--VHGMAAK 228
++ F+ N +++ L F + E +PD TF ++ A + G +H A
Sbjct: 1 MAAFSHNGCHSEALVFFRRMYQSGE-RPDRVTFSVILAAIAQMGAAAIDQGREIHRYARI 59
Query: 229 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
GL+ +V V A+I+MYGKC +++ FE + +N V+WN+++ + +G E+ +L
Sbjct: 60 SGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALEL 119
Query: 289 LIKMMGCEEGFIPD 302
+M PD
Sbjct: 120 FREMCERSRSARPD 133
>gi|168004577|ref|XP_001754988.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694092|gb|EDQ80442.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 437
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 112/209 (53%), Gaps = 9/209 (4%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L C + +E GK+VH +++ A +D I+ LI MY+ CG +F +K
Sbjct: 82 ILSVCASLRSLEKGKKVHCDMIKAGIH--SDRILGNTLIDMYAKCGNIRQGHTMFTEMKD 139
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ WN +++G +N + + +F E + LKPD T+ CV+ C + G
Sbjct: 140 RDVVTWNIIIAGAARNGYFDEAFELF-EAMREAGLKPDKVTYVCVLNVCSSLEQ---GRI 195
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H + GL D++V AL+ MY C +E+ +++FE +PERNLV+W S+I +++ G
Sbjct: 196 LHSYIIEAGLELDLWVGTALLNMYSNCRSLEDALQIFEKLPERNLVTWTSVIAAYAQAGI 255
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+++ KM+ +EG + D TVL
Sbjct: 256 PEKAWIFYEKML--KEGIVADKFAYTTVL 282
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 96/178 (53%), Gaps = 4/178 (2%)
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
F++N L+ MY CG D+R+VFD+++ R++F W +++G+ + + ++ ++
Sbjct: 11 FVLNA-LLNMYMKCGSITDARQVFDNMRERDMFTWTMMLTGYARLGHLEEAYRVYEQMLE 69
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ L D TF ++ C + + G VH K G+ D + N LI MY KC +
Sbjct: 70 E-RLPLDGVTFTTILSVCASLRSLEKGKKVHCDMIKAGIHSDRILGNTLIDMYAKCGNIR 128
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +F M +R++V+WN II G + NG+ E+F+L M E G PD +T V VL
Sbjct: 129 QGHTMFTEMKDRDVVTWNIIIAGAARNGYFDEAFELFEAMR--EAGLKPDKVTYVCVL 184
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 6/200 (3%)
Query: 113 IEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
+E G+ +H ++ A + D + T L+ MYS C D+ ++F+ L RNL W +++
Sbjct: 190 LEQGRILHSYIIEAGLEL--DLWVGTALLNMYSNCRSLEDALQIFEKLPERNLVTWTSVI 247
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
+ + + + + IF E + D F + V+ C + D+ G VH K G+
Sbjct: 248 AAYAQAGI-PEKAWIFYEKMLKEGIVADKFAYTTVLHVCATMGDLEKGKQVHDHMVKSGI 306
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
D + + LI MY KC + +L E+M ER++VS+ ++I G G E+
Sbjct: 307 ATDQILDSTLIDMYAKCGRTDIAHQLLEIMDERDVVSYTALIVGHVRQGRFQEALQTFSS 366
Query: 292 MMGCEEGFIPDVITVVTVLP 311
M +G +P+ +T V VL
Sbjct: 367 MQ--RDGVLPNTVTFVGVLK 384
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
K A +L C D+E GK+VH+ + S + D I+++ LI MY+ CG + ++
Sbjct: 275 KFAYTTVLHVCATMGDLEKGKQVHDHMVKSG-IATDQILDSTLIDMYAKCGRTDIAHQLL 333
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
+ + R++ + AL+ G + + + L F + D L P+ TF V+KAC G+ +
Sbjct: 334 EIMDERDVVSYTALIVGHVRQGRFQEALQTFSSMQRDGVL-PNTVTFVGVLKACTGLGSL 392
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
G +H K GL D + AL MY KC+
Sbjct: 393 VEGRRIHASIIKAGLAQDSSLKYALADMYAKCS 425
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL 289
G + FV NAL+ MY KC + + ++F+ M ER++ +W ++ G++ G E++ +
Sbjct: 5 GFVPSTFVLNALLNMYMKCGSITDARQVFDNMRERDMFTWTMMLTGYARLGHLEEAYRVY 64
Query: 290 IKMMGCEEGFIPDVITVVTVL 310
+M+ EE D +T T+L
Sbjct: 65 EQML--EERLPLDGVTFTTIL 83
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 112/209 (53%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++++C + +G+ VH A T ++D + + LI MYS G D+R FD + R
Sbjct: 147 VVKSCAALGAVSLGRLVHRTARA-TGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWR 205
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN ++ G+ K + +F + + +P+ T C + C AD+ G +
Sbjct: 206 DCVLWNVMMDGYIKAGDVGGAVRLFRNMRV-SGCEPNFATLACFLSVCAAEADLLSGVQL 264
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A K GL +V V+N L++MY KC +++ +LFE++P +LV+WN +I G +NG
Sbjct: 265 HSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLL 324
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ L M+ G PD +T+V++LP
Sbjct: 325 DEALGLFCDML--RSGARPDSVTLVSLLP 351
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 119/231 (51%), Gaps = 6/231 (2%)
Query: 82 KALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
KAL + + L A V +L AC + +G+ +H V + + + L
Sbjct: 427 KALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYV-LRNAYEGKCYVESAL 485
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
+ MY+ CG S +F + ++ WN+++S F++N + L +F ++ + +K +
Sbjct: 486 MDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEG-IKYN 544
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
N T + AC + + +G +HG+ K + D+F +ALI MY KC +E +++FE
Sbjct: 545 NVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFE 604
Query: 260 VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
MP++N VSWNSII + +G ES L +M EEG+ PD +T + ++
Sbjct: 605 FMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQ--EEGYKPDHVTFLALI 653
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 8/205 (3%)
Query: 103 LLQACGHEKDIEIGKRVHE--LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL- 159
LL+ C + +G ++H +VS + N ++TRL+ MY L D+ VF +L
Sbjct: 38 LLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSALP 97
Query: 160 --KTRNLFQWNALVSGFTKNELYTDVLSIFVEL-SSDTELKPDNFTFPCVIKACGGIADV 216
+ WN L+ GFT ++ + +V++ + PD T P V+K+C + V
Sbjct: 98 RAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAV 157
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G VH A GL DV+V +ALI MY + + F+ MP R+ V WN ++ G+
Sbjct: 158 SLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGY 217
Query: 277 SENGFSCESFDLL--IKMMGCEEGF 299
+ G + L +++ GCE F
Sbjct: 218 IKAGDVGGAVRLFRNMRVSGCEPNF 242
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L C E D+ G ++H L + + + L++MY+ C D+ R+F+ L +
Sbjct: 249 LSVCAAEADLLSGVQLHSL-AVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDD 307
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L WN ++SG +N L + L +F ++ + +PD+ T ++ A + + G VH
Sbjct: 308 LVTWNGMISGCVQNGLLDEALGLFCDMLR-SGARPDSVTLVSLLPALTDLNGLKQGKEVH 366
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G + + D F+ +AL+ +Y KC V L++ ++V +++I G+ NG S
Sbjct: 367 GYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSE 426
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ + ++ E+ P+ +TV +VLP
Sbjct: 427 KALQMFRYLL--EQCIKPNAVTVASVLP 452
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 3/160 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC I GK +H ++ D + LI MY+ CG + RVF+ + +N
Sbjct: 552 LSACASLPAIYYGKEIHGVI-IKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKN 610
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WN+++S + + L + +S F+ + KPD+ TF +I AC V G +
Sbjct: 611 EVSWNSIISAYGAHGLVKESVS-FLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLF 669
Query: 224 GMAAKMGLIGDVFVSNA-LIAMYGKCAFVEEMVKLFEVMP 262
K LI A ++ +Y + +++ ++ MP
Sbjct: 670 QCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMP 709
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 114/210 (54%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L ACG I G+++H + T + + + LI MY C ++ VFD +K
Sbjct: 271 GSVLPACGGLGAINDGRQIHACI-IRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 329
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+N+ W A+V G+ + + + IF+++ + + PD++T I AC I+ + GS
Sbjct: 330 QKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQR-SGIDPDHYTLGQAISACANISSLEEGS 388
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
HG A GLI + VSN+L+ +YGKC +++ +LF M R+ VSW +++ +++ G
Sbjct: 389 QFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFG 448
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ L KM+ + G PD +T+ V+
Sbjct: 449 RAVEAIQLFDKMV--QLGLKPDGVTLTGVI 476
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 36/258 (13%)
Query: 78 KSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
K+ N + NL L +L+ + +GK++H V F + ++ +
Sbjct: 121 KAYNTMMKDFSSNLTRVTLM----TMLKLSSSNGHVSLGKQIHGQV-IKLGFESYLLVGS 175
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT--- 194
L+ MYS G D+++VF L RN +N L+ G + D L +F + D+
Sbjct: 176 PLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSW 235
Query: 195 --------------------------ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK 228
LK D + F V+ ACGG+ + G +H +
Sbjct: 236 SAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIR 295
Query: 229 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
L ++V +ALI MY KC + +F+ M ++N+VSW +++ G+ + G + E+ +
Sbjct: 296 TNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKI 355
Query: 289 LIKMMGCEEGFIPDVITV 306
+ M G PD T+
Sbjct: 356 FLDMQ--RSGIDPDHYTL 371
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 81/204 (39%), Gaps = 34/204 (16%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+ YS G + R F+ L R+ WN L+ G++ + L + + + D
Sbjct: 75 LLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNL 134
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK----------- 247
T ++K V G +HG K+G + V + L+ MY K
Sbjct: 135 TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVF 194
Query: 248 --------------------CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFD 287
C +E+ ++LF M E++ VSW+++I G ++NG E+ +
Sbjct: 195 YGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGM-EKDSVSWSAMIKGLAQNGMEKEAIE 253
Query: 288 LLIKMMGCEEGFIPDVITVVTVLP 311
+M EG D +VLP
Sbjct: 254 CFREMK--IEGLKMDQYPFGSVLP 275
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 4/182 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G + AC + +E G + H + + + ++ L+T+Y CG DS R+F+ +
Sbjct: 372 GQAISACANISSLEEGSQFHG-KAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMN 430
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R+ W A+VS + + + + +F ++ LKPD T VI AC V G
Sbjct: 431 VRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQ-LGLKPDGVTLTGVISACSRAGLVEKGQ 489
Query: 221 GVHG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSE 278
M + G++ + +I ++ + +EE + MP R + + W +++
Sbjct: 490 RYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRN 549
Query: 279 NG 280
G
Sbjct: 550 KG 551
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF---SCESFDLLI 290
++F N L+ Y K + EM + FE +P+R+ V+WN +I G+S +G + ++++ ++
Sbjct: 68 NLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 127
Query: 291 K 291
K
Sbjct: 128 K 128
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 110/209 (52%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++ACG ++ + VH + S F D + + LI +Y+ G+ D+RRVFD L R
Sbjct: 151 VIKACGGLNNVPLCMVVHN-TARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQR 209
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN ++ G+ K+ + + + F + + + ++ T+ C++ C G+ V
Sbjct: 210 DTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMV-NSVTYTCILSICATRGKFCLGTQV 268
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ G D V+N L+AMY KC + + KLF MP+ + V+WN +I G+ +NGF+
Sbjct: 269 HGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFT 328
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ L M+ G PD +T + LP
Sbjct: 329 DEAAPLFNAMI--SAGVKPDSVTFASFLP 355
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 95/178 (53%), Gaps = 2/178 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L +AC ++ ++VH + S+ +++R++ +Y LCG D +F L+
Sbjct: 50 LFRACSDASVVQQARQVHTQIIVGG-MSDVCALSSRVLGLYVLCGRISDGGNLFFGLELC 108
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WN ++ G + L + ++ + + PD +TFP VIKACGG+ +V V
Sbjct: 109 NALPWNWMIRGLYMLGWFDFALLFYFKMLG-SNVSPDKYTFPYVIKACGGLNNVPLCMVV 167
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H A +G D+FV +ALI +Y ++ + ++F+ +P+R+ + WN ++ G+ ++G
Sbjct: 168 HNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSG 225
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 102/207 (49%), Gaps = 4/207 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C +G +VH LV S F D + L+ MYS CG D+R++F+++
Sbjct: 252 ILSICATRGKFCLGTQVHGLVIGSG-FEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQT 310
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN L++G+ +N + +F + S +KPD+ TF + + + V
Sbjct: 311 DTVTWNGLIAGYVQNGFTDEAAPLFNAMIS-AGVKPDSVTFASFLPSILESGSLRHCKEV 369
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + + DV++ +ALI +Y K VE K+F+ ++ ++I G+ +G +
Sbjct: 370 HSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLN 429
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTV 309
++ + ++ +EG +P+ +T+ +V
Sbjct: 430 IDAINTFRWLI--QEGMVPNSLTMASV 454
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 125/270 (46%), Gaps = 14/270 (5%)
Query: 41 RSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEAT 100
R IF++ + + ++ T S LH L ++N L+QE + L A+
Sbjct: 402 RKIFQQNTLVDVAVCTAMISGYVLHGLN--------IDAINTFRWLIQEGMVPNSLTMAS 453
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L AC +++GK +H + Q N + + + MY+ CG + F +
Sbjct: 454 --VLPACAALAALKLGKELHCDI-LKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMS 510
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ WN+++S F++N + +F ++ + K D+ + + + + + +G
Sbjct: 511 ETDSICWNSMISSFSQNGKPEMAVDLFRQMGM-SGAKFDSVSLSSALSSAANLPALYYGK 569
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG + D FV++ALI MY KC + +F +M +N VSWNSII + +G
Sbjct: 570 EMHGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHG 629
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E DL +M+ G PD +T + ++
Sbjct: 630 CARECLDLFHEML--RAGVHPDHVTFLVII 657
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK +H V FS+D + + LI MYS CG +R VF+ + +N WN++++ +
Sbjct: 568 GKEMHGYV-IRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYG 626
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG-SGVHGMAAKMGLIGD 234
+ + L +F E+ + PD+ TF +I ACG VG G H M + G+
Sbjct: 627 NHGCARECLDLFHEMLR-AGVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGAR 685
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ ++ +YG+ + E + MP
Sbjct: 686 MEHYACMVDLYGRAGRLHEAFDAIKSMP 713
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 118/244 (48%), Gaps = 41/244 (16%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFI------INTRLITMYSLCGFPLDSRRVF 156
+L AC + GK VH + T+ +F+ +N L+T+YS CG +RR+F
Sbjct: 300 VLSACANAGFFAHGKSVHGQI---TRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIF 356
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL-------------------- 196
D++K++++ WN ++SG+ ++ + +F E+ EL
Sbjct: 357 DNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALK 416
Query: 197 ----------KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
KP ++T+ I ACG + + G +HG ++G G NALI MY
Sbjct: 417 LFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYA 476
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
+C V+E +F VMP + VSWN++I ++G E+ +L +M+ EG PD I+
Sbjct: 477 RCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVA--EGIYPDRISF 534
Query: 307 VTVL 310
+TVL
Sbjct: 535 LTVL 538
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
D + T ++ Y G +R VF+ + + WNA++SG+ + + + +F +
Sbjct: 226 KDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRM 285
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM--GLIGDVF--VSNALIAMYG 246
+ + D FTF V+ AC G VHG ++ + + V+NAL+ +Y
Sbjct: 286 VLE-RVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYS 344
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
KC + ++F+ M +++VSWN+I+ G+ E+
Sbjct: 345 KCGNIAVARRIFDNMKSKDVVSWNTILSGYVES 377
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 121 ELVSASTQFSNDF--IINTRLITMYSLCGFPLDSRRVFDSL--KTRNLFQWNALVSGFTK 176
+L +A+T F D + T L+ Y+ G + FD++ R+ NA++S + +
Sbjct: 74 DLPAAATLFRADPCPVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYAR 133
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG--SGVHGMAAKMGLIGD 234
+++F L + L+PD+++F ++ A G + ++ + + K G G
Sbjct: 134 ASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGV 193
Query: 235 VFVSNALIAMYGKCAFVE---EMVKLFEVMPERNLVSWNSIICGFSENG 280
+ VSNAL+A+Y KC +E + K+ + MP+++ ++W +++ G+ G
Sbjct: 194 LSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRG 242
>gi|255549315|ref|XP_002515711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545148|gb|EEF46658.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 462
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 116/223 (52%), Gaps = 16/223 (7%)
Query: 62 QGLHFLQEI----TTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGK 117
Q L FL+++ TT SL + L+ LQ G +LQ K G+
Sbjct: 13 QRLRFLKKLLAYSTTAYFSHNSLAEPLTSLQ-----------CGTVLQTLTSIKSFTKGQ 61
Query: 118 RVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKN 177
++H + S N+ ++T+L Y+ CG ++ +FD + +N F WN ++ G+ N
Sbjct: 62 QLHAYIITSGNLQNNTYLSTKLAAFYASCGLMAAAQIIFDGIVLKNSFLWNFMIRGYACN 121
Query: 178 ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFV 237
L ++ ++SS + K D FT+P VIKACG + DV FG VH G D++V
Sbjct: 122 GFPVKALFLYQDMSSFGQ-KADKFTYPFVIKACGDLRDVEFGWRVHCEVVITGFNLDIYV 180
Query: 238 SNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
N+L+AMY K ++ +F+ MP R+L SWN++I G+ +NG
Sbjct: 181 GNSLLAMYSKFGNMKMARMVFDRMPVRDLTSWNTMISGYLKNG 223
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 7/210 (3%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+++ACG +D+E G RVH E+V T F+ D + L+ MYS G +R VFD +
Sbjct: 149 VIKACGDLRDVEFGWRVHCEVVI--TGFNLDIYVGNSLLAMYSKFGNMKMARMVFDRMPV 206
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R+L WN ++SG+ KN +VL+IF L L D+ T ++ C + G
Sbjct: 207 RDLTSWNTMISGYLKNGKPREVLAIF-NLMKQIGLSVDDMTLIGLLCTCAELFAEKQGKE 265
Query: 222 VHGMAAK-MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG + + + F+ N+LI MY KC + + KLFE M ++ VSWNS+I G++ N
Sbjct: 266 IHGYVVRNRHSVFNHFLINSLIEMYCKCNSMVDARKLFEHMAWKDTVSWNSMISGYARNR 325
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ES + +M+ EG PD IT +TVL
Sbjct: 326 DAFESLRVFCRMV--LEGTKPDKITFITVL 353
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 102/188 (54%), Gaps = 5/188 (2%)
Query: 116 GKRVHELVSASTQ-FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
GK +H V + N F+IN+ LI MY C +D+R++F+ + ++ WN+++SG+
Sbjct: 263 GKEIHGYVVRNRHSVFNHFLINS-LIEMYCKCNSMVDARKLFEHMAWKDTVSWNSMISGY 321
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
+N + L +F + + KPD TF V+ AC I + FG VH +K G
Sbjct: 322 ARNRDAFESLRVFCRMVLEGT-KPDKITFITVLGACEQITAMEFGRSVHSYLSKKGFSAT 380
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
+FV+ ALI MY KC + +FE MPE+NL W+++I G+ +G E+ L +M+
Sbjct: 381 IFVATALIDMYAKCGNLACAHLVFEEMPEKNLFCWSAMISGYGIHGMGREAISLFHEMI- 439
Query: 295 CEEGFIPD 302
+ IPD
Sbjct: 440 -KNHIIPD 446
>gi|125559296|gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indica Group]
Length = 700
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 116/212 (54%), Gaps = 6/212 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSN---DFIINTRLITMYSLCGFPLDSRRVFDSL 159
+++AC + G++V E+V A N + + L+ M++ CG ++R VF+S+
Sbjct: 156 VIKACAALGAVAQGRKVWEMVEADIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESM 215
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+ R+L W A++ G + + +V+ +F + S+ D+ VI ACG ++ G
Sbjct: 216 QVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEG-FGVDSLIAATVISACGRAGELQVG 274
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+ +HG A K G GD++VSNAL+ MY KC VE LF +++VSW+S+I G+S+N
Sbjct: 275 TALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQN 334
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G S L +M+ G P+ T+ ++LP
Sbjct: 335 GMHNVSVSLFCEMISL--GINPNSSTLASILP 364
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 101/211 (47%), Gaps = 10/211 (4%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
LQ+C D + +R+H V ++ +L+ Y+ G + RVFD + RN
Sbjct: 58 LQSC---PDFQEARRLHAAVLVGGHGHGTVLV-AQLVRAYAKLGDVAHALRVFDGMPRRN 113
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
F WNA++ G +++ L +F + +D + D FT+P VIKAC + V G V
Sbjct: 114 SFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVW 173
Query: 224 GMA----AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
M A +VFV AL+ M+ KC ++E +FE M R+L +W ++I G +
Sbjct: 174 EMVEADIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHS 233
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E DL M EGF D + TV+
Sbjct: 234 GNWLEVVDLFNHMR--SEGFGVDSLIAATVI 262
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 112/212 (52%), Gaps = 4/212 (1%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
++ ACG ++++G +H + + S D ++ L+ MY CG + +F S
Sbjct: 258 AATVISACGRAGELQVGTALHG-CAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWST 316
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
++++ W++L+ G+++N ++ +S+F E+ S + P++ T ++ + + G
Sbjct: 317 NSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMIS-LGINPNSSTLASILPCLSVLKLIRSG 375
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H + + GL FV +ALI +Y K + +F + +++L WNS++ G++ N
Sbjct: 376 KEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVN 435
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G+S +F L + + G PD +TVV+VLP
Sbjct: 436 GYSDSAFCALRLLQ--KVGLKPDHVTVVSVLP 465
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 10/203 (4%)
Query: 111 KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNAL 170
K I GK +H ++F+++ LI +YS G + +F ++L WN++
Sbjct: 370 KLIRSGKEIHCFSIRHGLERSEFVVSA-LIDLYSKQGLIRVAETIFWLTLDKDLAIWNSM 428
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
V+G+ N Y+D + L LKPD+ T V+ C + G +H K
Sbjct: 429 VAGYAVNG-YSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYC 487
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES---FD 287
+ V+NAL+ MY KC F+E ++F++M ERN V++N +I F ++ ++ FD
Sbjct: 488 INSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFD 547
Query: 288 LLIKMMGCEEGFIPDVITVVTVL 310
L+ + +G PD +T V +L
Sbjct: 548 LMKR-----DGIAPDKVTFVALL 565
>gi|357450533|ref|XP_003595543.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484591|gb|AES65794.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 958
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 110/211 (52%), Gaps = 9/211 (4%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL- 159
G +L AC + + GK VH V F + ++ + L+ MY CG SR VF+ L
Sbjct: 594 GTILTACANLGLLRQGKEVHGKV-VGLGFGGNVVVESSLLDMYGKCGCVRHSRIVFERLS 652
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+N W A++ + +N+ Y +VL + E D + F V++AC G+A V G
Sbjct: 653 DEKNNVSWTAMLGVYCQNKEYQNVLDLVRE-RGDLNF----YAFGIVLRACSGLAAVNHG 707
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
VH M + G DV + +AL+ +Y KC V+ +F M RNL++WNS++ GF++N
Sbjct: 708 KEVHCMYVRKGGSKDVIIESALVDLYAKCGMVDFACTMFASMEVRNLITWNSMVSGFAQN 767
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ L M+ +EG PD IT V VL
Sbjct: 768 GRGVEALALFEDMI--KEGIKPDSITFVAVL 796
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 89/163 (54%), Gaps = 2/163 (1%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN-LFQWNALVSGFTKNELYTDVLSIF 187
F + +++ LI MY D+RRVFD L ++ +F W +++S FT+N+++ + L F
Sbjct: 518 FDWNTVVSCSLIDMYGWNRAVDDARRVFDELFVKDDVFCWTSIISCFTRNDMFKESLKFF 577
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
++ + PD +TF ++ AC + + G VHG +G G+V V ++L+ MYGK
Sbjct: 578 YVMNRVRGVVPDGYTFGTILTACANLGLLRQGKEVHGKVVGLGFGGNVVVESSLLDMYGK 637
Query: 248 CAFVEEMVKLFEVM-PERNLVSWNSIICGFSENGFSCESFDLL 289
C V +FE + E+N VSW +++ + +N DL+
Sbjct: 638 CGCVRHSRIVFERLSDEKNNVSWTAMLGVYCQNKEYQNVLDLV 680
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 18/224 (8%)
Query: 37 KHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADL 96
+HS R +F+ LS + NN S + + C+ +K L L++E DL
Sbjct: 642 RHS-RIVFER-----LSDEKNNVSWTAM-----LGVYCQ-NKEYQNVLDLVRER---GDL 686
Query: 97 K-EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV 155
A G++L+AC + GK VH + S D II + L+ +Y+ CG + +
Sbjct: 687 NFYAFGIVLRACSGLAAVNHGKEVH-CMYVRKGGSKDVIIESALVDLYAKCGMVDFACTM 745
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
F S++ RNL WN++VSGF +N + L++F ++ + +KPD+ TF V+ AC
Sbjct: 746 FASMEVRNLITWNSMVSGFAQNGRGVEALALFEDMIKEG-IKPDSITFVAVLFACSHAGL 804
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
V G V + + G+ V N +I + G+ F++E L E
Sbjct: 805 VDEGRKVFTLMGEYGIKPVVEHYNCMIDLLGRAGFIDEAECLLE 848
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 102/178 (57%), Gaps = 4/178 (2%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL-SSD 193
+ T LI Y+ G + RVF S+ RNL W+A++ + KNE D + IF E+ +SD
Sbjct: 392 VATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASD 451
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+L P++ T V+ AC G+ +G G +H + G V V NAL+AMY KC +E
Sbjct: 452 ADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLET 511
Query: 254 MVKLFE-VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F + RN+VSWNS+I G+ +GF ES + +M+ EEG P++IT V+VL
Sbjct: 512 GRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMI--EEGISPNIITFVSVL 567
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 11/265 (4%)
Query: 51 SLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHE 110
SL+ ++ AS L I LC + L +A +LLQ A + LL A
Sbjct: 207 SLAPASSGASPANDDHL--IQMLCAHGR-LAQATALLQGL--PAPTQRTYESLLLAAARA 261
Query: 111 KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNAL 170
+D + VH + A F +D ++TRLI Y+ +R+VFD +N+F WNA+
Sbjct: 262 RDTALAAAVHRRLEADPVFRSDPFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAM 321
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG-----VHGM 225
+ + + L+ ++ + D++++ +KAC + + +H
Sbjct: 322 LKALALADHGEEALTCLADMGR-LGVPVDSYSYAHGLKACIAASASHLPASARVREMHAH 380
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
A + G V+ LI Y K V ++F MP+RNLVSW+++I +++N ++
Sbjct: 381 AIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDA 440
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
+ +MM + +P+ IT+V+VL
Sbjct: 441 IQIFQEMMASDADLVPNSITIVSVL 465
>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 709
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 127/237 (53%), Gaps = 11/237 (4%)
Query: 77 SKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFI- 134
+K+L+K+ SL+ N+H D LL+ + + K +H +++ S +FI
Sbjct: 66 TKALSKSKSLIA-NVHRCD------SLLRHYAATRSLNKTKILHGHTITSGLLHSPNFIH 118
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ + L Y+ CG +R++FD L +LF WNA++ + + D L +F +
Sbjct: 119 LPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSG 178
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+ PD +TFP VIKAC ++ + G +HG A G ++FV N+L+AMY C V
Sbjct: 179 KFWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLA 238
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++F VM +R++VSWN++I G+ +NG E+ + MM + PD T+V+ LP
Sbjct: 239 RQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMM--DARVEPDSATIVSALP 293
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 114/211 (54%), Gaps = 8/211 (3%)
Query: 102 VLLQACGHEKDIEIGKRVH--ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
++++AC + +G +H LVS FS++ + L+ MY CG +R+VF+ +
Sbjct: 189 LVIKACSVMSMLNVGVLIHGRALVSG---FSSNMFVQNSLLAMYMNCGKVGLARQVFNVM 245
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
R++ WN ++SG+ +N + L++F + D ++PD+ T + +CG + ++ G
Sbjct: 246 LKRSVVSWNTMISGWFQNGRPEEALAVFNSMM-DARVEPDSATIVSALPSCGYLKELELG 304
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
VH + K L + V NAL+ MY +C ++E +F E+++++W S+I G+ N
Sbjct: 305 IKVHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDVITWTSMINGYIMN 364
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + + L M +G +P+ +T+ ++L
Sbjct: 365 GNAKSALALCPAMQ--LDGVVPNAVTLASLL 393
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 5/174 (2%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L MY+ C S +VF + WNAL+SG NEL + + +F + + E++
Sbjct: 399 LCYMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELAREAVGLFKSMLIE-EVEA 457
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
++ TF VI A +AD+ +H + G I + V LI MY KC ++ K+F
Sbjct: 458 NHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIF 517
Query: 259 EVMP--ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +P E++++ W+ +I G+ +G E+ LL M G P+ IT +VL
Sbjct: 518 DEIPNKEKDIIVWSVLIAGYGMHGHG-ETAVLLFNQM-VHSGMQPNEITFTSVL 569
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSL--KTRNLFQWNALVSGFTKNELYTDVLSI 186
F + + T LI MYS CG + ++FD + K +++ W+ L++G+ + + +
Sbjct: 490 FISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLL 549
Query: 187 FVELSSDTELKPDNFTFPCVIKACG--GIADVGF 218
F ++ + ++P+ TF V+ AC G+ D G
Sbjct: 550 FNQM-VHSGMQPNEITFTSVLHACSHRGLVDDGL 582
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 118/208 (56%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +CG+ D+ GK +H LV S + T L+TMYS C DS +VF+SL
Sbjct: 209 VLVSCGNLGDLVNGKLIHGLVVKSG-LESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYA 267
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W + + G +N LS+F E+ + P++FTF ++ AC +A + G +
Sbjct: 268 SHVTWTSFIVGLVQNGREEIALSMFREMIR-CSISPNHFTFSSILHACSSLAMLEAGEQI 326
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + K+G+ G+ +V ALI +YGKC VE+ +FE + E ++VS N++I +++NGF
Sbjct: 327 HAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFG 386
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L +M + G P+V+T +++L
Sbjct: 387 HEALELFERMK--KLGHKPNVVTFISIL 412
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G++ H L +D + T ++ MY+ G D+R VFD + +++ + AL+ G+
Sbjct: 120 GQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYN 179
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+ L + L +F ++ + +KP+ +T V+ +CG + D+ G +HG+ K GL V
Sbjct: 180 QRGLDGEALEVFEDMVG-SRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVV 238
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+L+ MY KC VE+ +K+F + + V+W S I G +NG + + +M+ C
Sbjct: 239 ASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRC 298
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 90/174 (51%), Gaps = 4/174 (2%)
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
+LI Y C ++R++FD + R++ WN+++S + + ++ + + L
Sbjct: 40 KLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVL- 98
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL-IGDVFVSNALIAMYGKCAFVEEMVK 256
PD +TF + KA + G HG+A +G + D FV+ ++ MY K +++
Sbjct: 99 PDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARF 158
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ + ++++V + ++I G+++ G E+ ++ M+G P+ T+ +VL
Sbjct: 159 VFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSR--IKPNEYTLASVL 210
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
F + LI Y KC+ + E KLF+ MP R++V+WNS+I G + E+ +L M+
Sbjct: 36 FFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLF- 94
Query: 296 EEGFIPDVIT 305
EG +PD T
Sbjct: 95 -EGVLPDAYT 103
>gi|449508637|ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 594
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 115/209 (55%), Gaps = 5/209 (2%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+ +AC GK++H V+ + ++N+ ++ MY C + D++R F L
Sbjct: 216 IAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNS-ILDMYCRCNYLCDAKRCFGELTE 274
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+NL WN L++G+ +++ ++ LS+F ++ S+ KP+ FTF + AC +A + G
Sbjct: 275 KNLITWNTLIAGYERSD-SSESLSLFFQMGSEG-YKPNCFTFTSITAACANLAVLSCGQQ 332
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VHG + G +V + N+LI MY KC + + KLF MP R+LVSW +++ G+ +G+
Sbjct: 333 VHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGY 392
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M+ + G PD I + VL
Sbjct: 393 GKEAVKLFDEMV--QSGIQPDRIVFMGVL 419
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 6/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC K + G H L + + ++ N L + C D+ VF+ + +
Sbjct: 115 VLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLK 174
Query: 163 NLFQWNALVSGFT-KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
W L++GFT + + Y+ +L+ L D + P++F+F +AC I+ G
Sbjct: 175 TAVSWTTLIAGFTHRGDGYSGLLAFRQMLLED--VGPNSFSFSIAARACASISSYSCGKQ 232
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K GL D V N+++ MY +C ++ + + F + E+NL++WN++I G+ E
Sbjct: 233 IHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGY-ERSD 291
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTV 309
S ES L +M EG+ P+ T ++
Sbjct: 292 SSESLSLFFQM--GSEGYKPNCFTFTSI 317
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
T LI Y G ++ +F+ + R++ W A++ GFT Y ++F E+ +E+
Sbjct: 47 TNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLR-SEV 105
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY-GKCAFVEEMV 255
+P+ FT V+KAC G+ + G+ H +A K G+ V+V NAL+ MY CA +++ +
Sbjct: 106 QPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDAL 165
Query: 256 KLFEVMPERNLVSWNSIICGFSENG 280
+F +P + VSW ++I GF+ G
Sbjct: 166 SVFNDIPLKTAVSWTTLIAGFTHRG 190
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 131/248 (52%), Gaps = 11/248 (4%)
Query: 69 EITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQ 128
I LC+ + L AL LL + D++ +++Q CG E+ +E KR H L+ AS+
Sbjct: 72 RIQRLCQ-AGDLAGALRLLGSD-GGVDVRSYC-MVVQLCGEERSLEAAKRAHALIRASSA 128
Query: 129 FS---NDFIINTRLITMYSLCGFPLDSRRVFDSL--KTRNLFQWNALVSGFTKNELYTDV 183
+ ++ RL+ Y CG ++R VFD + + ++ W +L+S + K + +
Sbjct: 129 AATGGKGSVLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEA 188
Query: 184 LSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIA 243
+S+F ++ + PD CV+K + + G +HG+ K+GL V+NALIA
Sbjct: 189 VSLFRQMQC-CGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIA 247
Query: 244 MYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
+Y +C +E+ ++F+ M R+ +SWNS+I G NG+ + DL KM +G
Sbjct: 248 VYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMW--SQGTEISS 305
Query: 304 ITVVTVLP 311
+TV++VLP
Sbjct: 306 VTVLSVLP 313
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 102/182 (56%), Gaps = 4/182 (2%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTR-NLFQWNALVSGFTKNELYTDVLSIFVE 189
+D + ++L+ MY CG +RRVFD++ ++ N+ WN ++ G+ K + + LS+FV+
Sbjct: 348 DDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQ 407
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
+ + + PD C++K ++ G HG K+G V NALI+ Y K
Sbjct: 408 MH-ELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSN 466
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
+ + V +F MP ++ +SWNS+I G S NG + E+ +L I+M +G D +T+++V
Sbjct: 467 MIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMW--TQGQELDSVTLLSV 524
Query: 310 LP 311
LP
Sbjct: 525 LP 526
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + G+ VH S T + + L+ MYS C + ++F S+ +
Sbjct: 524 VLPACAQSRYWFAGRVVHGY-SVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQK 582
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A+++ + + L+ V + E+ D ++PD F + A G + G V
Sbjct: 583 NVVSWTAMITSYMRAGLFDKVAGLLQEMVLDG-IRPDVFAVTSALHAFAGDESLKQGKSV 641
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + G+ + V+NAL+ MY KC VEE +F+ + ++++SWN++I G+S N F
Sbjct: 642 HGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFP 701
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
ESF L M+ F P+ +T+ +LP
Sbjct: 702 NESFSLFSDML---LQFRPNAVTMTCILP 727
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 112/233 (48%), Gaps = 7/233 (3%)
Query: 80 LNKALSLLQENLHNADLKEATGVL--LQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
+K LLQE + + + V L A ++ ++ GK VH + +
Sbjct: 600 FDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGY-TIRNGMEKLLPVAN 658
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L+ MY C ++R +FD + +++ WN L+ G+++N + S+F ++ + +
Sbjct: 659 ALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDML--LQFR 716
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
P+ T C++ A I+ + G +H A + G + D + SNAL+ MY KC + L
Sbjct: 717 PNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVL 776
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ + ++NL+SW +I G+ +GF + L +M G G PD + +L
Sbjct: 777 FDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRG--SGIEPDAASFSAIL 827
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 110/247 (44%), Gaps = 33/247 (13%)
Query: 85 SLLQENLHNADLKEATGVL--LQACGHEKDIEIGKRVHELVSASTQFSNDFIIN------ 136
SL+ D +EA + +Q CG D V + VS+ + +I+
Sbjct: 174 SLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKL 233
Query: 137 ---------TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
LI +YS CG D+ RVFDS+ R+ WN+++ G N + + +F
Sbjct: 234 GLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLF 293
Query: 188 VEL-SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL----------IGDVF 236
++ S TE+ + T V+ AC G+ G VHG + K GL I D
Sbjct: 294 SKMWSQGTEI--SSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAA 351
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+ + L+ MY KC + ++F+ M + N+ WN I+ G+++ G ES L ++M
Sbjct: 352 LGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMH-- 409
Query: 296 EEGFIPD 302
E G PD
Sbjct: 410 ELGIAPD 416
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 133/273 (48%), Gaps = 15/273 (5%)
Query: 39 SLRSIFKEKSSLSLSAKTNNASTQGLHFLQ-EITTLCEESKSLNKALSLLQENLHNADLK 97
S +++F+E S S+ + T+ + L E L EE ++E + D+
Sbjct: 349 SAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE----------MEEEGISPDVY 398
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
T VL C + ++ GKRVHE + D ++ L+ MY+ CG ++ VF
Sbjct: 399 TVTAVL-NCCARYRLLDEGKRVHEWIK-ENDLGFDIFVSNALMDMYAKCGSMQEAELVFS 456
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
++ +++ WN ++ G++KN + LS+F L + PD T CV+ AC ++
Sbjct: 457 EMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFD 516
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G +HG + G D V+N+L+ MY KC + LF+ + ++LVSW +I G+
Sbjct: 517 KGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYG 576
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+GF E+ L +M + G D I+ V++L
Sbjct: 577 MHGFGKEAIALFNQMR--QAGIEADEISFVSLL 607
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 147/300 (49%), Gaps = 16/300 (5%)
Query: 14 PLFPSLRQKKSQPQFPATVIQRNKHSLRSIFKEKSSLS-LSAKTNNASTQGLHFLQEITT 72
P + ++ +S + VI N+ SLR++ S++ +A+TQ F
Sbjct: 19 PHLQNQKEIRSGVRVRKYVIF-NRASLRTVSDCVDSITTFDRSVTDANTQLRRFC----- 72
Query: 73 LCEESKSLNKALSLL-QENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSN 131
ES +L A+ LL + D + VL Q C K ++ GK V + + F
Sbjct: 73 ---ESGNLENAVKLLCVSGKWDIDPRTLCSVL-QLCADSKSLKDGKEVDNFIRGNG-FVI 127
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + ++L MY+ CG ++ RVFD +K WN L++ K+ ++ + +F ++
Sbjct: 128 DSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM 187
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
S + ++ D++TF CV K+ + V G +HG K G V N+L+A Y K V
Sbjct: 188 S-SGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRV 246
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ K+F+ M ER+++SWNSII G+ NG + + + ++M+ G D+ T+V+V
Sbjct: 247 DSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQML--VSGIEIDLATIVSVFA 304
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 8/202 (3%)
Query: 111 KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDS-RRVFDSLKTRNLFQWNA 169
+ + G+++H + S F + L+ Y L +DS R+VFD + R++ WN+
Sbjct: 209 RSVHGGEQLHGFILKSG-FGERNSVGNSLVAFY-LKNQRVDSARKVFDEMTERDVISWNS 266
Query: 170 LVSGFTKNELYTDVLSIFVE-LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK 228
+++G+ N L LS+FV+ L S E+ D T V C + G VH + K
Sbjct: 267 IINGYVSNGLAEKGLSVFVQMLVSGIEI--DLATIVSVFAGCADSRLISLGRAVHSIGVK 324
Query: 229 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
+ N L+ MY KC ++ +F M +R++VS+ S+I G++ G + E+ L
Sbjct: 325 ACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKL 384
Query: 289 LIKMMGCEEGFIPDVITVVTVL 310
+M EEG PDV TV VL
Sbjct: 385 FEEME--EEGISPDVYTVTAVL 404
>gi|357453191|ref|XP_003596872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240903|gb|ABD32761.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355485920|gb|AES67123.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 145/338 (42%), Gaps = 45/338 (13%)
Query: 8 SACLWSPLF-PSLRQKKSQPQFPATVIQRNKHSLRSIFKEKSSLSLSAKTNNASTQGLHF 66
+ C+ +P P ++ Q P+T N + + +LSL K N S Q + +
Sbjct: 4 TTCIATPTHHPDPPKQPPQIHPPSTFSPPNNPN------KNQTLSLKHKPN--SNQTVSW 55
Query: 67 LQEITTLCEESKSLNKALSLLQENLHNADLKEATGV-LLQACGH---EKDIEIGKRVHEL 122
I+ C+ + L A +Q + T + LL AC H + I G +H
Sbjct: 56 TSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPSKTSITFGAALHTH 115
Query: 123 VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTD 182
ND ++ T LI MY+ CG +R VFD + RNL WN ++ G+ KN D
Sbjct: 116 AFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGDVDD 175
Query: 183 VLSIFVELSSDTELK------------------------------PDNFTFPCVIKACGG 212
L +F +L + PD T +I AC
Sbjct: 176 ALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAIISACAN 235
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
+ +G G VH + K +V V N+LI MY +C +E ++F+ M +RNLVSWNSI
Sbjct: 236 LGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGMSQRNLVSWNSI 295
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I GF+ NG + ++ M +EG P+ ++ + L
Sbjct: 296 IVGFAVNGLADKALSFFRSMK--KEGLEPNGVSYTSAL 331
>gi|334185093|ref|NP_187175.2| mitochondrial editing factor 19 [Arabidopsis thaliana]
gi|218546759|sp|Q9MA95.2|PP214_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g05240
gi|332640689|gb|AEE74210.1| mitochondrial editing factor 19 [Arabidopsis thaliana]
Length = 565
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 126/244 (51%), Gaps = 14/244 (5%)
Query: 77 SKSLNKALSLLQENLHNADLKE--ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFI 134
S + +KAL QE L + +L+AC +DI+ G VH V T F +
Sbjct: 85 SPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFV-VKTGFEVNMY 143
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
++T L+ MY CG RVF+ + N+ W +L+SGF N ++D + F E+ S+
Sbjct: 144 VSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNG 203
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL-------IG-DVFVSNALIAMYG 246
+K + ++ ACG D+ G HG +G +G +V ++ +LI MY
Sbjct: 204 -VKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYA 262
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
KC + LF+ MPER LVSWNSII G+S+NG + E+ + + M+ + G PD +T
Sbjct: 263 KCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDML--DLGIAPDKVTF 320
Query: 307 VTVL 310
++V+
Sbjct: 321 LSVI 324
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 11/216 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSA-------STQFSNDFIINTRLITMYSLCGFPLDSRRV 155
LL ACG KDI GK H + ++ + I+ T LI MY+ CG +R +
Sbjct: 214 LLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYL 273
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
FD + R L WN++++G+++N + L +F+++ D + PD TF VI+A
Sbjct: 274 FDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDML-DLGIAPDKVTFLSVIRASMIQGC 332
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
G +H +K G + D + AL+ MY K E K FE + +++ ++W +I G
Sbjct: 333 SQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIG 392
Query: 276 FSENGFSCESFDLLIKMMGCEEG-FIPDVITVVTVL 310
+ +G E+ + +M E+G PD IT + VL
Sbjct: 393 LASHGHGNEALSIFQRMQ--EKGNATPDGITYLGVL 426
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 93/165 (56%), Gaps = 5/165 (3%)
Query: 118 RVHELVSASTQFSNDFIINTRLITMYSLCGFPLD---SRRVFDSLKTRNLFQWNALVSGF 174
++H L+ S+ N I +RLI + C ++ +R VF+S+ +++ WN+++ G+
Sbjct: 24 QLHGLMIKSSVIRN-VIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGY 82
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
+ N D IF + PD FTFP V+KAC G+ D+ FGS VHG K G +
Sbjct: 83 S-NSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVN 141
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
++VS L+ MY C V +++FE +P+ N+V+W S+I GF N
Sbjct: 142 MYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNN 186
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 10/181 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++Q C ++G+ +H VS T F D I L+ MY+ G +++ F+ L+ +
Sbjct: 328 MIQGCS-----QLGQSIHAYVS-KTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKK 381
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W ++ G + + LSIF + PD T+ V+ AC I V G
Sbjct: 382 DTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRY 441
Query: 223 HG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSII--CGFSE 278
M GL V ++ + + EE +L + MP + N+ W +++ C E
Sbjct: 442 FAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHE 501
Query: 279 N 279
N
Sbjct: 502 N 502
>gi|302785790|ref|XP_002974666.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
gi|300157561|gb|EFJ24186.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
Length = 921
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 110/209 (52%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSAST-QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L AC D+E GK +H + AS+ Q D I+ L+TMY CG D+ RVF ++
Sbjct: 103 VLGACCSPDDLETGKAIHRQIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRR 162
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N F W A+++ + +N + +F ++ S+ ++PD T+ V+ AC + D+ G
Sbjct: 163 KNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMR 222
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H + G + VS LI +YGK F E+ +++FE + +R++V W + I +G
Sbjct: 223 IHALIRSKG-VESAMVSTGLIDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYHGQ 281
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S + +L KM EG + +T +L
Sbjct: 282 SGFALELFRKMEA--EGLQANNVTFSKIL 308
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 113/211 (53%), Gaps = 10/211 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC KD+E GK+VH + S D ++ L+ +Y+ CG +SRR+F++++ R
Sbjct: 5 VLSACAGLKDMERGKKVHRRIRESVA-RVDTVLQNALLNLYAKCGDLEESRRIFEAMERR 63
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN +++ + +++ + + L F + + P + TF V+ AC D+ G +
Sbjct: 64 TVATWNTMITAYVQHDFFQEALEAFRRMDA----PPSSITFTSVLGACCSPDDLETGKAI 119
Query: 223 HGM--AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H A+ + D + N+L+ MYGKC +E+ ++F + +N SW ++I +++NG
Sbjct: 120 HRQIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNG 179
Query: 281 FSCESFDLLIKMMGCEEGFI-PDVITVVTVL 310
+ + ++ MM EG + PD IT VL
Sbjct: 180 YERRAIEVFGDMMS--EGRVEPDPITYAGVL 208
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 106/199 (53%), Gaps = 4/199 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQAC K++E G+ VH + AS F ++ T L+ MY CG ++RR FD K R
Sbjct: 405 VLQACSRLKNLEQGRAVHSRI-ASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKAR 463
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +L++ ++ + L +F + + ++P++ TF VI AC ++ + G +
Sbjct: 464 DVISWTSLITAYSHENFGREALEVFHSMELEG-VEPNSITFCTVIDACSRLSSLLPGRAL 522
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G I D FV NAL++MY K V+ +F+ +P + SW ++ ++NG S
Sbjct: 523 HSRVVATGHISDEFVGNALVSMYSKFGRVDFARVVFDSIPVKRYPSWRVMLVALTQNGHS 582
Query: 283 CESFDLLIKMMGCEEGFIP 301
E+ ++ ++ EGF P
Sbjct: 583 HEALEMYSRIH--LEGFRP 599
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 3/198 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC + G+ +H V A+ S++F+ N L++MYS G +R VFDS+ +
Sbjct: 506 VIDACSRLSSLLPGRALHSRVVATGHISDEFVGNA-LVSMYSKFGRVDFARVVFDSIPVK 564
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
W ++ T+N + L ++ + + +P + F + +C + DV +
Sbjct: 565 RYPSWRVMLVALTQNGHSHEALEMYSRIHLEG-FRPGSPIFSAALVSCTALEDVSRARAI 623
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ D+ +SN L+ +Y KC +EE +F+ M E+N VSW ++I G+++NG
Sbjct: 624 HGVIKSSDFYPDLVLSNVLMNVYAKCGELEEARLVFDQMTEKNEVSWTTMIGGYAQNGRP 683
Query: 283 CESFDLLIKMMGCEEGFI 300
E+ +L K M + FI
Sbjct: 684 AEALELY-KAMDVQPNFI 700
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 139/292 (47%), Gaps = 16/292 (5%)
Query: 24 SQPQFPATVIQRNKHSLRSIFKEKSSLSLSAKTNNA--STQGLHFLQEITTLCE---ESK 78
S PQ A I +N SL +++ + SL + + + + IT + E +
Sbjct: 126 SSPQIQADEILQN--SLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERR 183
Query: 79 SLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
++ ++ E D GVL AC D+E G R+H L+ + S +++T
Sbjct: 184 AIEVFGDMMSEGRVEPDPITYAGVL-TACSTLGDLETGMRIHALIRSKGVESA--MVSTG 240
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI +Y GF D+ +VF+S++ R++ W A ++ + L +F ++ ++ L+
Sbjct: 241 LIDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYHGQSGFALELFRKMEAEG-LQA 299
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+N TF ++ AC + D G + +GL D + + +++++ +C + ++F
Sbjct: 300 NNVTFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMF 359
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ MP R +V+W ++I +++ G+S E+ +L M PD I + VL
Sbjct: 360 DRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCM-----DIEPDDIALSNVL 406
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + +D E GK + + + + D ++ ++++++ CG + +R +FD + R
Sbjct: 307 ILAACSNLEDFETGKTIEDRIY-TLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHR 365
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W +++ + + + L EL +++PD+ V++AC + ++ G V
Sbjct: 366 TVVTWTTMIAAYNQRGYSMEAL----ELYHCMDIEPDDIALSNVLQACSRLKNLEQGRAV 421
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A + V L+ MY KC + E + F+ R+++SW S+I +S F
Sbjct: 422 HSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFG 481
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ ++ M EG P+ IT TV+
Sbjct: 482 REALEVFHSME--LEGVEPNSITFCTVI 507
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 103/207 (49%), Gaps = 7/207 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L +C +D+ + +H ++ S+ F D +++ L+ +Y+ CG ++R VFD + +N
Sbjct: 608 LVSCTALEDVSRARAIHGVIK-SSDFYPDLVLSNVLMNVYAKCGELEEARLVFDQMTEKN 666
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
W ++ G+ +N + L EL +++P+ F VI +C + + G VH
Sbjct: 667 EVSWTTMIGGYAQNGRPAEAL----ELYKAMDVQPNFIAFVPVISSCADLGALVEGQRVH 722
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ GL + + AL+ MY KC + + F+ + +WNS+ +++ G
Sbjct: 723 ARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQFGHGS 782
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L +M C +G P+ IT+++VL
Sbjct: 783 QVLELYREM--CLQGVQPNGITLLSVL 807
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
TF CV+ AC G+ D+ G VH + D + NAL+ +Y KC +EE ++FE M
Sbjct: 1 TFACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAM 60
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
R + +WN++I + ++ F E+ + +M P IT +VL
Sbjct: 61 ERRTVATWNTMITAYVQHDFFQEALEAFRRMDA-----PPSSITFTSVL 104
>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
Length = 838
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 121/215 (56%), Gaps = 11/215 (5%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+ C +++G+++H +++ + QF + + + LI MY+ G +R + L+
Sbjct: 421 ILRTCTSLGALDLGEQIHTQVIKSGFQF--NVYVCSVLIDMYAKHGELDTARGILQRLRE 478
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ W A+++G+T+++L+ + L +F E+ + ++ DN F I AC GI + G
Sbjct: 479 EDVVSWTAMIAGYTQHDLFAEALKLFQEMENQG-IRSDNIGFSSAISACAGIQALNQGQQ 537
Query: 222 VHGMAAKMGL-----IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
+H + G IG+ SN LI +Y KC +E+ + F MPE+N+VSWN++I G+
Sbjct: 538 IHAQSYISGYSEDLSIGNALASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGY 597
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
S++G+ E+ L +M + G +P+ +T V +P
Sbjct: 598 SQHGYGSEAVSLFEEMK--QLGLMPNHVTFVGEMP 630
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 7/210 (3%)
Query: 103 LLQAC-GHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+AC G + ++ +++H + S+ + N LI +YS G ++ VF+ L
Sbjct: 117 VLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNP-LIDLYSKNGHVDLAKLVFERLFL 175
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ W A++SG ++N + + +F ++ + P + F V+ AC I G
Sbjct: 176 KDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVI-PTPYVFSSVLSACTKIELFKLGEQ 234
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG K GL + FV NAL+ +Y + + ++F M R+ +S+NS+I G ++ GF
Sbjct: 235 LHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGF 294
Query: 282 SCESFDLLIKM-MGCEEGFIPDVITVVTVL 310
S + L KM + C + PD +TV ++L
Sbjct: 295 SDRALQLFEKMQLDCMK---PDCVTVASLL 321
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 103/208 (49%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + ++G+++H + S F+ N L+T+YS G + + ++F + R
Sbjct: 219 VLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNA-LVTLYSRWGNLIAAEQIFSKMHRR 277
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ +N+L+SG + L +F ++ D +KPD T ++ AC + G +
Sbjct: 278 DRISYNSLISGLAQRGFSDRALQLFEKMQLDC-MKPDCVTVASLLSACASVGAGYKGKQL 336
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H KMG+ D+ + +L+ +Y KC +E + F N+V WN ++ + + G
Sbjct: 337 HSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNL 396
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
ES+ + ++M EG +P+ T ++L
Sbjct: 397 SESYWIFLQMQ--IEGLMPNQYTYPSIL 422
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 93/190 (48%), Gaps = 2/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC GK++H V S+D II L+ +Y C + F + +T
Sbjct: 320 LLSACASVGAGYKGKQLHSYV-IKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETE 378
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN ++ + + ++ IF+++ + L P+ +T+P +++ C + + G +
Sbjct: 379 NVVLWNVMLVAYGQLGNLSESYWIFLQMQIEG-LMPNQYTYPSILRTCTSLGALDLGEQI 437
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G +V+V + LI MY K ++ + + + E ++VSW ++I G++++
Sbjct: 438 HTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLF 497
Query: 283 CESFDLLIKM 292
E+ L +M
Sbjct: 498 AEALKLFQEM 507
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 3/191 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L + C + + K++H + S F + ++ +RLI +Y G ++ ++FD + +
Sbjct: 16 LFEGCFNSGSLLDAKKLHARIFKSG-FDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSS 74
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC-GGIADVGFGSG 221
N+ WN ++SG +L + VL +F + ++ + PD TF V++AC GG A
Sbjct: 75 NVSFWNKVISGLLAKKLASQVLGLFSLMITEN-VTPDESTFASVLRACSGGKAPFQVTEQ 133
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H G V N LI +Y K V+ +FE + ++ VSW ++I G S+NG
Sbjct: 134 IHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGR 193
Query: 282 SCESFDLLIKM 292
E+ L +M
Sbjct: 194 EDEAILLFCQM 204
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K G G+ + + LI +Y V+ +KLF+ +P N+ WN +I G
Sbjct: 32 LHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKL 91
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + L M+ E PD T +VL
Sbjct: 92 ASQVLGLFSLMI--TENVTPDESTFASVL 118
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 133/273 (48%), Gaps = 15/273 (5%)
Query: 39 SLRSIFKEKSSLSLSAKTNNASTQGLHFLQ-EITTLCEESKSLNKALSLLQENLHNADLK 97
S +++F+E S S+ + T+ + L E L EE ++E + D+
Sbjct: 198 SAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE----------MEEEGISPDVY 247
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
T VL C + ++ GKRVHE + D ++ L+ MY+ CG ++ VF
Sbjct: 248 TVTAVL-NCCARYRLLDEGKRVHEWIK-ENDLGFDIFVSNALMDMYAKCGSMQEAELVFS 305
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
++ +++ WN ++ G++KN + LS+F L + PD T CV+ AC ++
Sbjct: 306 EMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFD 365
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G +HG + G D V+N+L+ MY KC + LF+ + ++LVSW +I G+
Sbjct: 366 KGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYG 425
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+GF E+ L +M + G D I+ V++L
Sbjct: 426 MHGFGKEAIALFNQMR--QAGIEADEISFVSLL 456
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 8/202 (3%)
Query: 111 KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDS-RRVFDSLKTRNLFQWNA 169
+ + G+++H + S F + L+ Y L +DS R+VFD + R++ WN+
Sbjct: 58 RSVHGGEQLHGFILKSG-FGERNSVGNSLVAFY-LKNQRVDSARKVFDEMTERDVISWNS 115
Query: 170 LVSGFTKNELYTDVLSIFVE-LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK 228
+++G+ N L LS+FV+ L S E+ D T V C + G VH + K
Sbjct: 116 IINGYVSNGLAEKGLSVFVQMLVSGIEI--DLATIVSVFAGCADSRLISLGRAVHSIGVK 173
Query: 229 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
+ N L+ MY KC ++ +F M +R++VS+ S+I G++ G + E+ L
Sbjct: 174 ACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKL 233
Query: 289 LIKMMGCEEGFIPDVITVVTVL 310
+M EEG PDV TV VL
Sbjct: 234 FEEME--EEGISPDVYTVTAVL 253
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 84/156 (53%), Gaps = 3/156 (1%)
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
FD +K WN L++ K+ ++ + +F ++ S + ++ D++TF CV K+ +
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS-SGVEMDSYTFSCVSKSFSSLRS 59
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
V G +HG K G V N+L+A Y K V+ K+F+ M ER+++SWNSII G
Sbjct: 60 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 119
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ NG + + + ++M+ G D+ T+V+V
Sbjct: 120 YVSNGLAEKGLSVFVQML--VSGIEIDLATIVSVFA 153
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 110/207 (53%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
LQACG ++ G RVHEL+ SN ++N LITMYS C + VFD L R
Sbjct: 269 LQACGELGCLDEGMRVHELLVRIGLDSNVSVMNA-LITMYSKCKRVDLASHVFDELDRRT 327
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WNA++ G +N D + +F + + +KPD+FT VI A I+D +H
Sbjct: 328 QVSWNAMILGCAQNGCSEDAVRLFTRMQLEN-VKPDSFTLVSVIPALADISDPLQARWIH 386
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G + ++ L DV+V ALI MY KC V LF ER++++WN++I G+ +GF
Sbjct: 387 GYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGK 446
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L +M G +P+ T ++VL
Sbjct: 447 AAVELFEEMKSI--GIVPNETTFLSVL 471
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 109/208 (52%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C D+ G+ VH ++A ++ + T L MY+ C P D+RRVFD + R
Sbjct: 65 LLKLCAARGDLATGRAVHAQLAARG-IDSEALAATALANMYAKCRRPADARRVFDRMPVR 123
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNALV+G+ +N L + + V + + +PD+ T V+ AC +
Sbjct: 124 DRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREA 183
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A + GL V V+ A++ Y KC + +F+ MP +N VSWN++I G+++NG S
Sbjct: 184 HAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDS 243
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M+ EEG ++V+ L
Sbjct: 244 REALALFNRMV--EEGVDVTDVSVLAAL 269
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
Query: 184 LSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIA 243
L+ FV +SS P TF ++K C D+ G VH A G+ + + AL
Sbjct: 44 LAAFVAMSS-AGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 244 MYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
MY KC + ++F+ MP R+ V+WN+++ G++ NG + + +++++M EEG PD
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQE-EEGERPDS 161
Query: 304 ITVVTVLP 311
IT+V+VLP
Sbjct: 162 ITLVSVLP 169
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 119/219 (54%), Gaps = 15/219 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +++G ++H L S + + +I ++ +Y CG+ ++++++F+ ++T
Sbjct: 272 VLSACCVMLTLDLGAQIHSL-SIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETL 330
Query: 163 NLFQWNALVSGFTKN-ELYTD----------VLSIFVELSSDTELKPDNFTFPCVIKACG 211
NL WNA+++G K +L D L++F +L + +KPD FTF V+ C
Sbjct: 331 NLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYR-SGMKPDLFTFSSVLSVCS 389
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
+ + G +HG K G++ DV V AL++MY KC +++ K F MP R ++SW S
Sbjct: 390 NLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTS 449
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+I GF+ +G S ++ L M G P+ +T V VL
Sbjct: 450 MITGFARHGLSQQALQLFEDMRLV--GIKPNQVTFVGVL 486
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 120/244 (49%), Gaps = 12/244 (4%)
Query: 75 EESKSLNKALSLLQENLHNADL-KEATGV-------LLQACGHEKDIEIGKRVHELVSAS 126
++S K SL+Q N+ +A+ K T + LLQ C + +H +
Sbjct: 34 DKSVGFQKNHSLIQLNVVDAEEPKLGTRIESSYYFPLLQECIDRNLATEARMIHGHI-VK 92
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
T F D + T L+ +YS CG + +VFD+L RN+ W L++G+ +N L +
Sbjct: 93 TGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQL 152
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
F+++ + P N+T V+ AC + + FG VH K + D + N+L + Y
Sbjct: 153 FIKML-EAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYS 211
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
K +E +K F+++ E++++SW S+I +NG + S + M+ +G P+ T+
Sbjct: 212 KFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLS--DGMKPNEYTL 269
Query: 307 VTVL 310
+VL
Sbjct: 270 TSVL 273
>gi|449435950|ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 606
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 115/209 (55%), Gaps = 5/209 (2%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+ +AC GK++H V+ + ++N+ ++ MY C + D++R F L
Sbjct: 216 IAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNS-ILDMYCRCNYLCDAKRCFGELTE 274
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+NL WN L++G+ +++ ++ LS+F ++ S+ KP+ FTF + AC +A + G
Sbjct: 275 KNLITWNTLIAGYERSD-SSESLSLFFQMGSEG-YKPNCFTFTSITAACANLAVLSCGQQ 332
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VHG + G +V + N+LI MY KC + + KLF MP R+LVSW +++ G+ +G+
Sbjct: 333 VHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGY 392
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M+ + G PD I + VL
Sbjct: 393 GKEAVKLFDEMV--QSGIQPDRIVFMGVL 419
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 6/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC K + G H L + + ++ N L + C D+ VF+ + +
Sbjct: 115 VLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLK 174
Query: 163 NLFQWNALVSGFT-KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
W L++GFT + + Y+ +L+ L D + P++F+F +AC I+ G
Sbjct: 175 TAVSWTTLIAGFTHRGDGYSGLLAFRQMLLED--VGPNSFSFSIAARACASISSYSCGKQ 232
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K GL D V N+++ MY +C ++ + + F + E+NL++WN++I G+ E
Sbjct: 233 IHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGY-ERSD 291
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTV 309
S ES L +M EG+ P+ T ++
Sbjct: 292 SSESLSLFFQM--GSEGYKPNCFTFTSI 317
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
T LI Y G ++ +F+ + R++ W A++ GFT Y ++F E+ +E+
Sbjct: 47 TNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLR-SEV 105
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY-GKCAFVEEMV 255
+P+ FT V+KAC G+ + G+ H +A K G+ V+V NAL+ MY CA +++ +
Sbjct: 106 QPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDAL 165
Query: 256 KLFEVMPERNLVSWNSIICGFSENG 280
+F +P + VSW ++I GF+ G
Sbjct: 166 SVFNDIPLKTAVSWTTLIAGFTHRG 190
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 110/191 (57%), Gaps = 2/191 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ AC + + G+++H+ + ++ D I+N +++MY CG D+R VFD + R
Sbjct: 70 LICACSSSRSLAQGRKIHDHI-LNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 128
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL + ++++G+++N + +++++++ +L PD F F +IKAC DV G +
Sbjct: 129 NLVSYTSVITGYSQNGQEAEAITLYLKM-LQADLVPDQFAFGSIIKACACAGDVVLGKQL 187
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K+ + NALIAMY + + + K+F +P ++L+SW+SII GFS+ GF
Sbjct: 188 HAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFE 247
Query: 283 CESFDLLIKMM 293
E+ L +M+
Sbjct: 248 FEALSHLKEML 258
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 124/236 (52%), Gaps = 5/236 (2%)
Query: 75 EESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFI 134
+E++++ L +LQ +L + A G +++AC D+ +GK++H V + S+ I
Sbjct: 145 QEAEAITLYLKMLQADL--VPDQFAFGSIIKACACAGDVVLGKQLHAQV-IKLESSSHLI 201
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
LI MY D+ +VF + ++L W+++++GF++ + LS E+ S
Sbjct: 202 AQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFG 261
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
P+ + F +KAC + +GS +HG+ K+ L G+ +L MY +C F++
Sbjct: 262 VFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSA 321
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F + + SWN II G + NG++ E+ + +M GFIPD I++ ++L
Sbjct: 322 RRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRN--SGFIPDAISLRSLL 375
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 123/233 (52%), Gaps = 7/233 (3%)
Query: 81 NKALSLLQENLHNADLKEATGVLLQACGHEKDIEI--GKRVHELVSASTQFSNDFIINTR 138
++A+S+ E ++ + +A + C K + + G ++H + F D +
Sbjct: 350 DEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFI-IKCGFLADLSVCNS 408
Query: 139 LITMYSLCGFPLDSRRVFDSLKTR-NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L+TMY+ C +F+ + + + WNA+++ ++E ++L +F +L +E +
Sbjct: 409 LLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLF-KLMLVSECE 467
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
PD+ T +++ C I+ + GS VH + K GL+ + F+ N LI MY KC + + ++
Sbjct: 468 PDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRI 527
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ M ++VSW+++I G++++GF E+ L +M G P+ +T V VL
Sbjct: 528 FDSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKS--SGIEPNHVTFVGVL 578
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
V ++KT L N ++ +N Y + L F ++ K T+ +I AC
Sbjct: 21 VVSTIKTEELM--NDHINSLCRNSFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSR 78
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+ G +H D ++N +++MYGKC + + ++F+ MPERNLVS+ S+I
Sbjct: 79 SLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVIT 138
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPD 302
G+S+NG E+ L +KM+ + +PD
Sbjct: 139 GYSQNGQEAEAITLYLKML--QADLVPD 164
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 110/207 (53%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
LQACG ++ G RVHEL+ SN ++N LITMYS C + VFD L R
Sbjct: 269 LQACGELGCLDEGMRVHELLVRIGLDSNVSVMNA-LITMYSKCKRVDLASHVFDELDRRT 327
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WNA++ G +N D + +F + + +KPD+FT VI A I+D +H
Sbjct: 328 QVSWNAMILGCAQNGCSEDAVRLFTRMQLEN-VKPDSFTLVSVIPALADISDPLQARWIH 386
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G + ++ L DV+V ALI MY KC V LF ER++++WN++I G+ +GF
Sbjct: 387 GYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGK 446
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L +M G +P+ T ++VL
Sbjct: 447 AAVELFEEMKSI--GIVPNETTFLSVL 471
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 109/208 (52%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C D+ G+ VH ++A ++ + T L MY+ C P D+RRVFD + R
Sbjct: 65 LLKLCAARGDLATGRAVHAQLAARG-IDSEALAATALANMYAKCRRPADARRVFDRMPVR 123
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNALV+G+ +N L + + V + + +PD+ T V+ AC +
Sbjct: 124 DRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREA 183
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A + GL V V+ A++ Y KC + +F+ MP +N VSWN++I G+++NG S
Sbjct: 184 HAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDS 243
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M+ EEG ++V+ L
Sbjct: 244 REALALFNRMV--EEGVDVTDVSVLAAL 269
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
Query: 184 LSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIA 243
L+ FV +SS P TF ++K C D+ G VH A G+ + + AL
Sbjct: 44 LAAFVAMSS-AGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 244 MYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
MY KC + ++F+ MP R+ V+WN+++ G++ NG + + +++++M EEG PD
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQE-EEGERPDS 161
Query: 304 ITVVTVLP 311
IT+V+VLP
Sbjct: 162 ITLVSVLP 169
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 114/210 (54%), Gaps = 3/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +++AC DI++G+++H V S + + I LI+MY+ G + + VF +
Sbjct: 262 GSIIKACCIAGDIDLGRQLHGHVIKSG-YDHHLIAQNALISMYTRFGQIVHASDVFTMIS 320
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
T++L W ++++GFT+ + L +F ++ +P+ F F V AC + + FG
Sbjct: 321 TKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGR 380
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HGM AK GL +VF +L MY K F+ ++ F + +LVSWN+II FS++G
Sbjct: 381 QIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSG 440
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +MM G +PD IT +++L
Sbjct: 441 DVNEAIYFFCQMM--HTGLMPDGITFLSLL 468
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 120/233 (51%), Gaps = 8/233 (3%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADLK---EATGVLLQACGHEKDIEIGKRVHELVSAS 126
I +C++ + +AL + N+ ++ G L+ AC + ++ GK++H+ + S
Sbjct: 128 INLMCKQ-RHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKS 186
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
D ++ ++ MY CG D+R+ FD+++ RN+ W ++SG+++N D + +
Sbjct: 187 N-CQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIM 245
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
++++ PD TF +IKAC D+ G +HG K G + NALI+MY
Sbjct: 246 YIQMLQSGYF-PDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYT 304
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
+ + +F ++ ++L+SW S+I GF++ G+ E+ L M +GF
Sbjct: 305 RFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMF--RQGF 355
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 121/238 (50%), Gaps = 7/238 (2%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVL--LQACGHEKDIEIGKRVHELVSASTQFSNDF 133
+S +N+A+ + +H + + L L ACG I G ++H + +
Sbjct: 438 DSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYI-IKIGLDKEA 496
Query: 134 IINTRLITMYSLCGFPLDSRRVF-DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
+ L+TMY+ C D+ VF D + NL WNA++S +++ +V +F +L
Sbjct: 497 AVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLF-KLML 555
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+E KPDN T ++ C +A + G+ VH + K GL+ DV VSN LI MY KC ++
Sbjct: 556 FSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLK 615
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F ++VSW+S+I G+++ G E+ +L +MM G P+ +T + VL
Sbjct: 616 HARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLF-RMMK-NLGVQPNEVTYLGVL 671
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
Query: 168 NALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAA 227
N+ ++ K Y + L F ++ ++ ++ T+ +I AC I + +G +H
Sbjct: 125 NSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHIL 184
Query: 228 KMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFD 287
K D+ + N ++ MYGKC +++ K F+ M RN+VSW +I G+S+NG ++
Sbjct: 185 KSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAII 244
Query: 288 LLIKMMGCEEGFIPDVITVVTVL 310
+ I+M+ + G+ PD +T +++
Sbjct: 245 MYIQML--QSGYFPDPLTFGSII 265
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 113/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C ++I++G+++H L S T F +D ++ LI MYS G+ +RRV + LK +
Sbjct: 351 ILRTCTCTREIDLGEQIHSL-SVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK 409
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W ++++G+ ++E D L+ F E+ + PDN I C GI + G +
Sbjct: 410 DVVSWTSMIAGYVQHECCKDALAAFKEMQK-CGIWPDNIGLASAISGCAGINAMRQGLQI 468
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G GDV + NAL+ +Y +C + E FE + ++ ++WN ++ GF+++G
Sbjct: 469 HARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLH 528
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + ++M + G +V T V+ L
Sbjct: 529 EEALKVFMRMD--QSGVKHNVFTFVSAL 554
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ C + G ++H + S +S D I L+ +Y+ CG ++ F+ ++ ++
Sbjct: 453 ISGCAGINAMRQGLQIHARIYVSG-YSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKD 511
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WN LVSGF ++ L+ + L +F+ + + +K + FTF + A +A++ G +H
Sbjct: 512 EITWNGLVSGFAQSGLHEEALKVFMRMDQ-SGVKHNVFTFVSALSASANLAEIKQGKQIH 570
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
K G + V NALI++YGKC E+ F M ERN VSWN+II S++G
Sbjct: 571 ARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGL 630
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL +M +EG P+ +T + VL
Sbjct: 631 EALDLFDQMK--KEGIKPNDVTFIGVL 655
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 110/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC D++ G ++H + + S+D+I+ L+ +Y CG + +F+S
Sbjct: 250 LLAACASLGDLQKGTQLHSYLFKAG-ISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT 308
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN ++ F + +F ++ + ++P+ FT+PC+++ C ++ G +
Sbjct: 309 NVVLWNLMLVAFGQINDLAKSFELFCQMQA-AGIRPNQFTYPCILRTCTCTREIDLGEQI 367
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H ++ K G D++VS LI MY K ++E+ ++ E++ E+++VSW S+I G+ ++
Sbjct: 368 HSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECC 427
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +M C G PD I + + +
Sbjct: 428 KDALAAFKEMQKC--GIWPDNIGLASAI 453
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 105/209 (50%), Gaps = 7/209 (3%)
Query: 104 LQAC-GHEKDIEIGKRVHELVSASTQFSNDF-IINTRLITMYSLCGFPLDSRRVFDSLKT 161
L+AC G+ + ++ +H A T+ + I+ LI +YS G L +RRVF+ L
Sbjct: 48 LRACRGNGRRWQVVPEIH--AKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSA 105
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R+ W A++SG+ +N L + L ++ ++ + P + V+ +C G
Sbjct: 106 RDNVSWVAMLSGYAQNGLGEEALGLYRQMHR-AGVVPTPYVLSSVLSSCTKAELFAQGRL 164
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K G ++FV NA+I +Y +C ++F MP R+ V++N++I G ++ G
Sbjct: 165 IHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGH 224
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ +M G PD +T+ ++L
Sbjct: 225 GEHALEIFEEMQF--SGLSPDCVTISSLL 251
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 8/232 (3%)
Query: 82 KALSLLQENLHNADLKEATGVL---LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
+AL L ++ +H A + VL L +C + G+ +H F ++ +
Sbjct: 126 EALGLYRQ-MHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQ-GYKHGFCSEIFVGNA 183
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+IT+Y CG + RVF + R+ +N L+SG + L IF E+ + L P
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF-SGLSP 242
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D T ++ AC + D+ G+ +H K G+ D + +L+ +Y KC VE + +F
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
N+V WN ++ F + +SF+L +M G P+ T +L
Sbjct: 303 NSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAA--GIRPNQFTYPCIL 352
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 6/142 (4%)
Query: 171 VSGFTKNELYTDVLSIFVELSSDTE-LKPDNFTFPCVIKACGGIADV-GFGSGVHGMAAK 228
++GF +E VLS+F + + L P F C ++AC G +H A
Sbjct: 13 LAGFLAHEDPAKVLSLFADKARQHGGLGP--LDFACALRACRGNGRRWQVVPEIHAKAVT 70
Query: 229 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
GL V N LI +Y K V ++FE + R+ VSW +++ G+++NG E+ L
Sbjct: 71 RGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGL 130
Query: 289 LIKMMGCEEGFIPDVITVVTVL 310
+M G +P + +VL
Sbjct: 131 YRQMH--RAGVVPTPYVLSSVL 150
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 112/212 (52%), Gaps = 8/212 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACGH + +E+GK + V F + + L+ MYS CG +R++FD ++ +
Sbjct: 265 VLSACGHLRSLELGKWIGSWVR-DRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDK 323
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN ++ G+ LY + L +F E+ + P++ TF V+ AC + + G V
Sbjct: 324 DVILWNTMIGGYCHLSLYEEALVLF-EVMLRENVTPNDVTFLAVLPACASLGALDLGKWV 382
Query: 223 HGMAAK----MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
H K G + +V + ++I MY KC VE ++F M R+L SWN++I G +
Sbjct: 383 HAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAM 442
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
NG + + L +M+ EGF PD IT V VL
Sbjct: 443 NGHAERALGLFEEMI--NEGFQPDDITFVGVL 472
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 119/242 (49%), Gaps = 14/242 (5%)
Query: 74 CEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFS--- 130
C +SK+ ++A + LH LK A + L H I + +V EL A F
Sbjct: 137 CAKSKATHEA-----KQLHAHALKLA--LHLHPHVHTSLIHMYSQVGELRHARLVFDKST 189
Query: 131 -NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE 189
D + T LIT Y G D+RR+FD + +++ WNA+++G+ ++ + + L+ F
Sbjct: 190 LRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTR 249
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
+ + ++ P+ T V+ ACG + + G + G ++ + NAL+ MY KC
Sbjct: 250 MQ-EADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCG 308
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
+ KLF+ M +++++ WN++I G+ E+ L M+ E P+ +T + V
Sbjct: 309 EIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVML--RENVTPNDVTFLAV 366
Query: 310 LP 311
LP
Sbjct: 367 LP 368
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 102/246 (41%), Gaps = 48/246 (19%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC-----GFPLDSRRVFD 157
LL C DI K++H L+ S N ++LI +L + L +F
Sbjct: 31 LLAKC---PDIPSLKQIHSLIIKSG-LHNTLFAQSKLIEFCALSPSRDLSYALS---LFH 83
Query: 158 SLKTR--NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
S+ + N+F WN L+ + T L +F ++ + L P++ TFP + K+C
Sbjct: 84 SIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLH-SGLYPNSHTFPSLFKSCAKSKA 142
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC--------------------------- 248
+H A K+ L V +LI MY +
Sbjct: 143 THEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITG 202
Query: 249 ----AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVI 304
V++ +LF+ +P +++VSWN++I G+ ++G E+ +M E P+
Sbjct: 203 YVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQ--EADVSPNQS 260
Query: 305 TVVTVL 310
T+V+VL
Sbjct: 261 TMVSVL 266
>gi|356495733|ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Glycine max]
Length = 770
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 109/214 (50%), Gaps = 4/214 (1%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
+ V+L +C +E GK VH S F +D + + LI +YS CG S+ VF
Sbjct: 416 RTTLAVILSSCAELGFLEAGKEVHA-ASQKFGFYDDVYVASSLINVYSKCGKMELSKHVF 474
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
L ++ WN++++GF+ N L D LS F ++ P F+F V+ +C ++ +
Sbjct: 475 SKLPELDVVCWNSMLAGFSINSLGQDALSFFKKMRQ-LGFFPSEFSFATVVSSCAKLSSL 533
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G H K G + D+FV ++LI MY KC V F+VMP RN V+WN +I G+
Sbjct: 534 FQGQQFHAQIVKDGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGY 593
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++NG + L M+ G PD IT V VL
Sbjct: 594 AQNGDGHNALCLYNDMI--SSGEKPDDITYVAVL 625
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 8/204 (3%)
Query: 107 CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQ 166
C EK E +R+ S + D + ++T G R++FD + +L
Sbjct: 329 CNSEKAAEYLQRMQ-----SDGYEPDDVTYINMLTACVKSGDVRTGRQIFDCMPCPSLTS 383
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
WNA++SG+ +N + + + +F ++ + PD T ++ +C + + G VH +
Sbjct: 384 WNAILSGYNQNADHREAVELFRKMQFQCQ-HPDRTTLAVILSSCAELGFLEAGKEVHAAS 442
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
K G DV+V+++LI +Y KC +E +F +PE ++V WNS++ GFS N ++
Sbjct: 443 QKFGFYDDVYVASSLINVYSKCGKMELSKHVFSKLPELDVVCWNSMLAGFSINSLGQDAL 502
Query: 287 DLLIKMMGCEEGFIPDVITVVTVL 310
KM + GF P + TV+
Sbjct: 503 SFFKKMR--QLGFFPSEFSFATVV 524
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+Q C K GK VH + FS+ F+ N I +YS C + VFD++ +
Sbjct: 12 LVQHCITNKAHLSGKVVHARLFRLALFSDTFLSN-HFIELYSKCDHIASACHVFDNIPHK 70
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK------------------------- 197
N+F WNA+++ + K +F+++ +
Sbjct: 71 NIFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYDSVM 130
Query: 198 -----PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
P + TF V ACG + D G HG+ K+GL +++V NAL+ MY KC
Sbjct: 131 LDGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGLNA 190
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +++F +PE N V++ +++ G ++ E+ +L M+ +G D +++ ++L
Sbjct: 191 DALRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRLML--RKGIRVDSVSLSSML 246
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 118/245 (48%), Gaps = 16/245 (6%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
E ++L+ S++ + + + + AT + ACG D + G+R H +V SN +++
Sbjct: 119 ERQALDTYDSVMLDGVIPSHITFAT--VFSACGSLLDADCGRRTHGVVIKVGLESNIYVV 176
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
N L+ MY+ CG D+ RVF + N + ++ G + + +F L
Sbjct: 177 NA-LLCMYAKCGLNADALRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAELF-RLMLRKG 234
Query: 196 LKPDNFTFPCVIKACG-GIADVGFGSGV---------HGMAAKMGLIGDVFVSNALIAMY 245
++ D+ + ++ C G DVG G+ H ++ K+G D+ + N+L+ MY
Sbjct: 235 IRVDSVSLSSMLGVCAKGERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMY 294
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
K ++ K+F + ++VSWN +I G+ S ++ + L +M +G+ PD +T
Sbjct: 295 AKIGDMDSAEKVFVNLNRHSVVSWNIMIAGYGNRCNSEKAAEYLQRMQ--SDGYEPDDVT 352
Query: 306 VVTVL 310
+ +L
Sbjct: 353 YINML 357
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 4/175 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
++ +C + G++ H + F +D + + LI MY CG +R FD +
Sbjct: 521 ATVVSSCAKLSSLFQGQQFHAQI-VKDGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMP 579
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN WN ++ G+ +N + L ++ ++ S E KPD+ T+ V+ AC A V G
Sbjct: 580 GRNTVTWNEMIHGYAQNGDGHNALCLYNDMISSGE-KPDDITYVAVLTACSHSALVDEGL 638
Query: 221 GV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
+ + M K G++ V +I + E+ + + MP + + V W ++
Sbjct: 639 EIFNAMLQKYGVVPKVAHYTCIIDCLSRAGRFNEVEVILDAMPCKDDAVVWEVVL 693
>gi|222622248|gb|EEE56380.1| hypothetical protein OsJ_05522 [Oryza sativa Japonica Group]
Length = 518
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 142/280 (50%), Gaps = 22/280 (7%)
Query: 35 RNKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNA 94
R+ HS R++F + S S++ T N G C+E + + L + H
Sbjct: 72 RDVHSARAMFDKISRPSVT--TWNTLLSGY---------CQEEQH-QDTIELFRRMQHQN 119
Query: 95 DLKEAT--GVLLQACGHEKDIEIGKRVHELVSASTQF--SNDFIINTRLITMYSLCGFPL 150
+ T V+L +C ++ G++VH SAS +F ND + + L+ MYS CG
Sbjct: 120 VQPDRTTLAVILSSCSKLGILDFGRQVH---SASVRFLLHNDMFVASGLVDMYSKCGQIG 176
Query: 151 DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
+R +F+ + R++ WN+++SG T + L + F ++ + + P ++ +I +C
Sbjct: 177 IARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENG-IMPTESSYASMINSC 235
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
++ + G +H K G +V+V +ALI MY KC +++ F+ M +N+V+WN
Sbjct: 236 SRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWN 295
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+I G+++NG ++ +L M+ E+ PD +T + VL
Sbjct: 296 EMIHGYAQNGLGDKAVELFEYMLTTEQK--PDAVTFIAVL 333
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 244 MYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
MY KC ++E VK+FE +P +VSWN +I GF + G ++ ++L M E GF P+
Sbjct: 1 MYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQ--EAGFEPNE 58
Query: 304 ITVVTVL 310
+T +L
Sbjct: 59 VTYSNLL 65
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 59/127 (46%), Gaps = 9/127 (7%)
Query: 142 MYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF 201
MY+ C ++ +VF+SL + + WN L++GF + + + + L + +P+
Sbjct: 1 MYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEV-LSLMQEAGFEPNEV 59
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVS--NALIAMYGKCAFVEEMVKLFE 259
T+ ++ +C D VH A I V+ N L++ Y + ++ ++LF
Sbjct: 60 TYSNLLASCIKARD------VHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFR 113
Query: 260 VMPERNL 266
M +N+
Sbjct: 114 RMQHQNV 120
>gi|15217493|ref|NP_177302.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169718|sp|Q9C9I3.1|PP115_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g71460, chloroplastic; Flags: Precursor
gi|12323723|gb|AAG51819.1|AC016163_8 unknown protein; 45757-47826 [Arabidopsis thaliana]
gi|332197082|gb|AEE35203.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 146/305 (47%), Gaps = 24/305 (7%)
Query: 13 SPLFPSLRQKKSQPQFPATVIQRNKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITT 72
SP+ PS ++ P+T + R SSL L +K + +
Sbjct: 38 SPIRPSRTRR------PSTSPAKKPKPFRERDAFPSSLPLHSKNP-------YIIHRDIQ 84
Query: 73 LCEESKSLNKALSLLQENLHNADLKEAT--GVLLQACGHEKDIEIGKRVHELVSASTQFS 130
+ +L AL++L AT LL+AC K + GK+VH + + S
Sbjct: 85 IFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLES 144
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG--FTKNELYTDVLSIFV 188
N+F+ T+L+ MY+ CG D+++VFD + N++ WNAL+ G + + Y DVLS F
Sbjct: 145 NEFL-RTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFT 203
Query: 189 ELSSDTELKPD--NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
E+ EL D ++ V K+ G + + G H +A K GL VF+ +L+ MY
Sbjct: 204 EMR---ELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYF 260
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
KC V ++F+ + ER++V W ++I G + N E+ L + M EE P+ + +
Sbjct: 261 KCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLF-RTMISEEKIYPNSVIL 319
Query: 307 VTVLP 311
T+LP
Sbjct: 320 TTILP 324
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 4/197 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G + H L + F N + T L+ MY CG +RRVFD + R++ W A+++G
Sbjct: 233 GLKTHALAIKNGLF-NSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLA 291
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK-MGLIGD 234
N+ + L +F + S+ ++ P++ ++ G + + G VH K +
Sbjct: 292 HNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQ 351
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
FV + LI +Y KC + ++F +RN +SW +++ G++ NG ++ ++ M
Sbjct: 352 PFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQ- 410
Query: 295 CEEGFIPDVITVVTVLP 311
+EGF PDV+T+ TVLP
Sbjct: 411 -QEGFRPDVVTIATVLP 426
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 1/177 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L G K +++GK VH V S + +++ LI +Y CG RRVF K R
Sbjct: 322 ILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQR 381
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N W AL+SG+ N + L V + + +PD T V+ C + + G +
Sbjct: 382 NAISWTALMSGYAANGRFDQALRSIVWMQQEG-FRPDVVTIATVLPVCAELRAIKQGKEI 440
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
H A K + +V + +L+ MY KC E ++LF+ + +RN+ +W ++I + EN
Sbjct: 441 HCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVEN 497
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLIT----MYSLCGFPLDSRRVF 156
+L C + I+ GK +H N F+ N L+T MYS CG P R+F
Sbjct: 422 ATVLPVCAELRAIKQGKEIH-----CYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLF 476
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
D L+ RN+ W A++ + +N + +F L ++ +PD+ T V+ C + +
Sbjct: 477 DRLEQRNVKAWTAMIDCYVENCDLRAGIEVF-RLMLLSKHRPDSVTMGRVLTVCSDLKAL 535
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G +HG K FVS +I MYGKC + F+ + + ++W +II +
Sbjct: 536 KLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAY 595
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
N ++ + +M+ GF P+ T VL
Sbjct: 596 GCNELFRDAINCFEQMVS--RGFTPNTFTFTAVL 627
>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
Length = 829
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 114/209 (54%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L A D+ G+ H V ++ +D ++ T ++TMY+ CG +RR FD++ R
Sbjct: 47 ILDAFASLGDLSQGEFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVR 106
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W+A+++ + + D L +FV + + +K + TF V+ AC + + G +
Sbjct: 107 NVVSWSAMIAAYAQRGHPGDALELFVRMDHEG-VKANAITFVSVLDACASMRAIALGKSI 165
Query: 223 HGMAAKMGLIG-DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
H GL+G DV + N ++ MYGKC V+ ++FE M +N V+WN++I S +
Sbjct: 166 HERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDR 225
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F LL +M +G P+ IT+V+V+
Sbjct: 226 YKEAFALLGEMD--LDGLRPNKITLVSVI 252
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 106/208 (50%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + I +GK +HE + A +D I+ ++ MY CG +R VF+ ++ +
Sbjct: 149 VLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAK 208
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WN +++ ++++ Y + ++ E+ D L+P+ T VI AC + + G V
Sbjct: 209 NAVTWNTMIAACSRHDRYKEAFALLGEMDLDG-LRPNKITLVSVIDACAWMQSIVRGRIV 267
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + A GL D V+NAL+ +YGKC + E + R+ +SW +++ ++ +G
Sbjct: 268 HEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGHG 327
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ +M EG D T V +L
Sbjct: 328 KRAIAVIKRMD--HEGVKLDSFTFVNLL 353
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 119/240 (49%), Gaps = 7/240 (2%)
Query: 74 CEESKSLNKALSLLQE-NLHNADLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSN 131
C +A +LL E +L + T V ++ AC + I G+ VHE+V+ S+
Sbjct: 220 CSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESD 279
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ + N L+ +Y CG +R + ++TR+ W L++ + ++ +++ +
Sbjct: 280 NTVANA-LVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMD 338
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ +K D+FTF ++++C IA + G +H A+ G+ D + AL+ MYGKC
Sbjct: 339 HEG-VKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNP 397
Query: 252 EEMVKLFEVMPE-RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + F+ M + R++ WN+++ + E+ + +M +G PD +T +++L
Sbjct: 398 DAARRAFDRMSDVRDVTVWNALLAAYVLRDQGKETLGIFARM--SLQGVAPDAVTFLSIL 455
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 14/219 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL-KT 161
LL++C + +G+ +H+ + A + D ++ T L+ MY CG P +RR FD +
Sbjct: 352 LLESCVAIAALALGEEIHDRL-AESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDV 410
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ WNAL++ + + + L IF +S + PD TF ++ AC +A +G G
Sbjct: 411 RDVTVWNALLAAYVLRDQGKETLGIFARMSLQG-VAPDAVTFLSILDACASLAALGLGRL 469
Query: 222 VHGMAAKMGLIGDVFVSNA------LIAMYGKC-AFVEEMVKLFEVMPER--NLVSWNSI 272
H + GL V++A +I MY KC + + + + R ++V+W+++
Sbjct: 470 THSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAM 529
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ +S+ G S E+ M +EG PD ++ V+ +
Sbjct: 530 VAAYSQFGLSEEALRCFYSMQ--QEGVKPDSVSFVSAIA 566
>gi|297823227|ref|XP_002879496.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325335|gb|EFH55755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 617
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 108/190 (56%), Gaps = 2/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC H D+ G R+ E ++ + + + ++LITMY CG +RRVF+ + +
Sbjct: 236 MLGACAHLGDLTTG-RLLEKMAITKKIGLSTFLGSKLITMYGKCGDLDSARRVFNQMIKK 294
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA+++ +++N ++ +F E+ T + PD T V+ ACG + + G +
Sbjct: 295 DRVAWNAMITVYSQNGKSSEAFKLFFEMEK-TGVSPDAGTLSTVLSACGSVGALELGKRI 353
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
A+++ L +++V+ L+ MYGKC +EE +++FE MP +N +WN++I ++ G +
Sbjct: 354 ETHASEISLQHNIYVATGLVDMYGKCGHIEEALRVFEAMPVKNEATWNAMITAYAHQGHA 413
Query: 283 CESFDLLIKM 292
E+ L +M
Sbjct: 414 KEALLLFDQM 423
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
ACG ++I +G+ VH + +D I ++ LI MY+ CG +R+VFD + R
Sbjct: 138 ACGKREEIGVGRSVHSSLFKVGLERDDHISHS-LIMMYAKCGLVGYARKVFDEITDRVTV 196
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
WN+++SG+++ D + +F ++ + +PD T ++ AC + D+ G + M
Sbjct: 197 SWNSMISGYSEAGRAKDAMDLFRKMEEEG-FEPDERTLVSMLGACAHLGDLTTGRLLEKM 255
Query: 226 A--AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
A K+GL F+ + LI MYGKC ++ ++F M +++ V+WN++I +S+NG S
Sbjct: 256 AITKKIGL--STFLGSKLITMYGKCGDLDSARRVFNQMIKKDRVAWNAMITVYSQNGKSS 313
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F L +M + G PD T+ TVL
Sbjct: 314 EAFKLFFEME--KTGVSPDAGTLSTVL 338
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 8/151 (5%)
Query: 163 NLFQWNALVSGFTKNELYTD---VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
N + +N ++ G T ++ D LS++ + + LKPDNFT+ V ACG ++G G
Sbjct: 92 NHYSFNYMIRGLTN--IWNDHEGALSLYRRMKY-SGLKPDNFTYNFVFIACGKREEIGVG 148
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
VH K+GL D +S++LI MY KC V K+F+ + +R VSWNS+I G+SE
Sbjct: 149 RSVHSSLFKVGLERDDHISHSLIMMYAKCGLVGYARKVFDEITDRVTVSWNSMISGYSEA 208
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + ++ DL KM EEGF PD T+V++L
Sbjct: 209 GRAKDAMDLFRKME--EEGFEPDERTLVSML 237
>gi|225216963|gb|ACN85255.1| EMB2261 putative [Oryza officinalis]
Length = 622
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 115/210 (54%), Gaps = 6/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G ++ A G+ K G++ H V + + I+ + + MY+ CG +++R+VFD ++
Sbjct: 245 GSMMTALGNLKRGSQGRQAHAQV-VTRGLCGNVIVESSTLDMYAKCGLMVEARKVFDRMQ 303
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN AL+ G+ +N Y V+++F E+ + D ++ V++AC G++ V G
Sbjct: 304 VRNEVSRCALLGGYCQNGEYEKVIALFREMDKE---DGDWYSLGTVLRACAGLSSVKPGK 360
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H +MG DV V +AL+ +Y KC V+ +FE RN ++WN++I GF++NG
Sbjct: 361 EIHCRFLRMGGWRDVVVESALVDLYAKCGAVDYAYSVFEASTVRNTITWNAMIGGFAQNG 420
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L +M+ EG PD I+ + VL
Sbjct: 421 HGERAINLFNRMV--REGPRPDYISFIGVL 448
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 10/235 (4%)
Query: 81 NKALSLLQENLHNADLK-----EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
+AL+ L+ L AD A ++AC +D + G +H V F +D ++
Sbjct: 118 RRALASLRSMLAGADDDVSPNAHALSAAVKACAVLRDRKAGACLHGSVLVRG-FGDDDVV 176
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
+ L+ MY P D+R+VF+ ++ + + +L+S F +N+ + + + F +
Sbjct: 177 LSSLVDMYGHVAAPGDARKVFEEMRAPDGICYTSLISAFVRNDWFEEAVRWFRSMLMMNG 236
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
++PD TF ++ A G + G H GL G+V V ++ + MY KC + E
Sbjct: 237 VRPDGCTFGSMMTALGNLKRGSQGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGLMVEAR 296
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F+ M RN VS +++ G+ +NG E L + M E+G D ++ TVL
Sbjct: 297 KVFDRMQVRNEVSRCALLGGYCQNG-EYEKVIALFREMDKEDG---DWYSLGTVL 347
>gi|225216998|gb|ACN85287.1| EMB2261 putative [Oryza australiensis]
Length = 626
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 115/210 (54%), Gaps = 6/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G ++ A G+ K G++ H V + + I+ + + MY+ CG +++R+VFD ++
Sbjct: 249 GSMMTALGNLKRGSQGRQAHAQV-VTRGLCGNVIVESSTLDMYAKCGLMVEARKVFDRME 307
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN AL+ G+ +N Y V+++F E+ + D ++ V++AC G++ V G
Sbjct: 308 VRNEVSRCALLGGYCQNGEYEKVIALFREMDKE---DGDWYSLGTVLRACAGLSSVKPGK 364
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H +MG DV V +AL+ +Y KC V+ +FE RN ++WN++I GF++NG
Sbjct: 365 EIHCRFLRMGGWRDVVVESALVDLYAKCGAVDYACSVFEASTVRNTITWNAMISGFAQNG 424
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L +M+ EG PD I+ + VL
Sbjct: 425 HGERAINLFNRMV--REGPRPDYISFIGVL 452
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 114/235 (48%), Gaps = 10/235 (4%)
Query: 81 NKALSLLQENLHNADLK-----EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
+AL+ L+ L AD A ++AC +D + G +H V +D ++
Sbjct: 122 RRALASLRAMLAGADDDVSPNAHALSAAVKACAVLRDRKAGACLHGSVLVRGMGDDDVVL 181
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
++ L+ MY P D+R+ F+ ++ + + +L+S F +N+ + + + F + +
Sbjct: 182 SS-LVDMYGHVAAPGDARKAFEEMRGPDGICYTSLISAFVRNDWFEEAVRWFRSMLTMNG 240
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
++PD TF ++ A G + G H GL G+V V ++ + MY KC + E
Sbjct: 241 VRPDGCTFGSMMTALGNLKRGSQGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGLMVEAR 300
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F+ M RN VS +++ G+ +NG E L + M E+G D ++ TVL
Sbjct: 301 KVFDRMEVRNEVSRCALLGGYCQNG-EYEKVIALFREMDKEDG---DWYSLGTVL 351
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA-FVEEMVKLFEVMPERNLVSWNSIICGF 276
G +H AA+ G + D +++NAL+A Y + + ++ F+ +P R++V+ +SI+ F
Sbjct: 56 LGYCLHARAARAGFLADRYLANALLAFYVRLPRHLPHALRAFDDLPHRDVVAHSSILAAF 115
Query: 277 SENGFSCESFDLLIKMM-GCEEGFIPDV 303
G + L M+ G ++ P+
Sbjct: 116 LRAGMPRRALASLRAMLAGADDDVSPNA 143
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C +I++G+++H L S T F +D ++ LI MYS G+ +RRV + LK +
Sbjct: 351 ILRTCTCTGEIDLGEQIHSL-SVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK 409
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W ++++G+ ++E D L+ F E+ + PDN I C GI + G +
Sbjct: 410 DVVSWTSMIAGYVQHEYCKDALAAFKEMQK-CGIWPDNIGLASAISGCAGIKAMRQGLQI 468
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G GDV + NAL+ +Y +C + E FE + ++ ++WN ++ GF+++G
Sbjct: 469 HARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLH 528
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + ++M + G +V T V+ L
Sbjct: 529 EEALKVFMRMD--QSGVKHNVFTFVSAL 554
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 99/189 (52%), Gaps = 2/189 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ C K + G ++H V S +S D I L+ +Y+ CG ++ F+ ++ ++
Sbjct: 453 ISGCAGIKAMRQGLQIHARVYVSG-YSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKD 511
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WN LVSGF ++ L+ + L +F+ + + +K + FTF + A +A++ G +H
Sbjct: 512 EITWNGLVSGFAQSGLHEEALKVFMRMDQ-SGVKHNVFTFVSALSASANLAEIKQGKQIH 570
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
K G + V NALI++YGKC E+ F M ERN VSWN+II S++G
Sbjct: 571 ARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGL 630
Query: 284 ESFDLLIKM 292
E+ D +M
Sbjct: 631 EALDFFDQM 639
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 110/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC D++ G ++H + + S+D+I+ L+ +Y CG + +F+
Sbjct: 250 LLAACASLGDLQKGTQLHSYLFKAG-MSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRT 308
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN ++ F + +F ++ + ++P+ FT+PC+++ C ++ G +
Sbjct: 309 NVVLWNLILVAFGQINDLAKSFELFCQMQT-AGIRPNQFTYPCILRTCTCTGEIDLGEQI 367
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H ++ K G D++VS LI MY K ++E+ ++ E++ E+++VSW S+I G+ ++ +
Sbjct: 368 HSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYC 427
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +M C G PD I + + +
Sbjct: 428 KDALAAFKEMQKC--GIWPDNIGLASAI 453
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 5/208 (2%)
Query: 104 LQAC-GHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+AC G+ + ++ +H + + D I+ LI +YS G L +RRVF+ L R
Sbjct: 48 LRACRGNGRRWQVVPEIHA-KAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSAR 106
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W A++SG+ +N L + L ++ ++ + P + V+ +C G V
Sbjct: 107 DNVSWVAMLSGYAQNGLGEEALWLYRQMHR-AGVVPTPYVLSSVLSSCTKAELFAQGRSV 165
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G + FV NALI +Y +C ++F MP R+ V++N++I G ++
Sbjct: 166 HAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHG 225
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ +M G PD +T+ ++L
Sbjct: 226 EHALEIFEEMQ--SSGLSPDCVTISSLL 251
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 102/227 (44%), Gaps = 7/227 (3%)
Query: 87 LQENLHNADLKEATGVL---LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMY 143
L +H A + VL L +C + G+ VH F ++ + LIT+Y
Sbjct: 130 LYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQ-GYKQGFCSETFVGNALITLY 188
Query: 144 SLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTF 203
CG + RVF + R+ +N L+SG + L IF E+ S + L PD T
Sbjct: 189 LRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQS-SGLSPDCVTI 247
Query: 204 PCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 263
++ AC + D+ G+ +H K G+ D + +L+ +Y KC VE + +F +
Sbjct: 248 SSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNR 307
Query: 264 RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
N+V WN I+ F + +SF+L +M G P+ T +L
Sbjct: 308 TNVVLWNLILVAFGQINDLAKSFELFCQMQTA--GIRPNQFTYPCIL 352
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 6/142 (4%)
Query: 171 VSGFTKNELYTDVLSIFVELSSDTE-LKPDNFTFPCVIKACGGIADV-GFGSGVHGMAAK 228
++GF E VLS+F + + L P F C ++AC G +H A
Sbjct: 13 LAGFLAQEDPAKVLSLFADKARQHGGLGP--LDFACALRACRGNGRRWQVVPEIHAKAIT 70
Query: 229 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
GL D V N LI +Y K V ++FE + R+ VSW +++ G+++NG E+ L
Sbjct: 71 RGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWL 130
Query: 289 LIKMMGCEEGFIPDVITVVTVL 310
+M G +P + +VL
Sbjct: 131 YRQMH--RAGVVPTPYVLSSVL 150
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L A + +I+ GK++H V T S + + LI++Y CG D++ F + RN
Sbjct: 554 LSASANLAEIKQGKQIHARV-IKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERN 612
Query: 164 LFQWNALVSGFTK-----------NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
WN +++ ++ +++ + LS F +S ++P + CVI G
Sbjct: 613 EVSWNTIITSCSQHGRGLEALDFFDQMKKEGLSYFKSMSDKYGIRPRPDHYACVIDIFG 671
>gi|115470991|ref|NP_001059094.1| Os07g0191500 [Oryza sativa Japonica Group]
gi|34394559|dbj|BAC83863.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510108|dbj|BAD30876.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610630|dbj|BAF21008.1| Os07g0191500 [Oryza sativa Japonica Group]
Length = 550
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 9/203 (4%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+++H L + + ++ L+ +YS CG P + +F + R+L WN V
Sbjct: 82 GRQLHALAAKLGLAPSHTVVANSLLHLYSSCGLPGAALDLFRRIPDRSLVSWNTAVDALV 141
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK-MGLIG- 233
N + L +F E+ DTEL PD +T V+ AC G + G H + + +G G
Sbjct: 142 GNGDHLAALDLFREMQRDTELAPDAYTVQSVLGACAGAGALSLGVYAHALLLRELGGDGD 201
Query: 234 ------DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFD 287
D+ ++N+L+ +YGKC +E ++F+ MP R+L SWN +I + +G CES +
Sbjct: 202 GEAVSRDMLINNSLVDLYGKCGALELAQQVFDRMPARDLASWNVMILTLANHGRVCESVE 261
Query: 288 LLIKMMGCEEGFIPDVITVVTVL 310
L +M E+ P+ IT V VL
Sbjct: 262 LFDRMTQVEK-MAPNAITFVAVL 283
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI-GD 234
+ +L L +F L S P + + P V+ A ++ + G +H +AAK+GL
Sbjct: 39 RADLAHRALLLFRSLQSTPSPPPPHVSLPAVLSAAAFLSALPEGRQLHALAAKLGLAPSH 98
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
V+N+L+ +Y C + LF +P+R+LVSWN+ + NG + DL +M
Sbjct: 99 TVVANSLLHLYSSCGLPGAALDLFRRIPDRSLVSWNTAVDALVGNGDHLAALDLFREMQR 158
Query: 295 CEEGFIPDVITVVTVL 310
E PD TV +VL
Sbjct: 159 DTE-LAPDAYTVQSVL 173
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 28/211 (13%)
Query: 83 ALSLLQENLHNADLK-EATGV--LLQACGHEKDIEIGKRVHELV-------SASTQFSND 132
AL L +E + +L +A V +L AC + +G H L+ S D
Sbjct: 149 ALDLFREMQRDTELAPDAYTVQSVLGACAGAGALSLGVYAHALLLRELGGDGDGEAVSRD 208
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
+IN L+ +Y CG +++VFD + R+L WN ++ + + + +F ++
Sbjct: 209 MLINNSLVDLYGKCGALELAQQVFDRMPARDLASWNVMILTLANHGRVCESVELFDRMTQ 268
Query: 193 DTELKPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG---- 246
++ P+ TF V+ AC GG+ + G ++ D + I YG
Sbjct: 269 VEKMAPNAITFVAVLSACNHGGLVEEG--------RRYFAMMVDQYRIKPRIEHYGCMVD 320
Query: 247 ---KCAFVEEMVKLFEVMPER-NLVSWNSII 273
+ F+EE + + M R + + W S++
Sbjct: 321 LLARAGFIEEALDIVAGMNCRPDAIIWRSLL 351
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 113/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+A + + K++H L+ + D + LI +YS C DSR VFD +K +
Sbjct: 460 LLRASASLTSLGLSKQIHGLM-FKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK 518
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN++ +G+ + + L++F+EL E +PD FTF ++ A G +A V G
Sbjct: 519 DLVIWNSMFAGYVQQSENEEALNLFLELQLSRE-RPDEFTFANMVTAAGNLASVQLGQEF 577
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K GL + +++NAL+ MY KC E+ K F+ R++V WNS+I ++ +G
Sbjct: 578 HCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEG 637
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L KMM EG P+ IT V VL
Sbjct: 638 KKALQMLEKMM--SEGIEPNYITFVGVL 663
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 109/209 (52%), Gaps = 3/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E GK++H + + ++N LI Y CG + + ++F+ + +
Sbjct: 255 VLSACSILPFLEGGKQIHAHILRYGLEMDASLMNV-LIDSYVKCGRVIAAHKLFNGMPNK 313
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W L+SG+ +N L+ + + +F +S LKPD + ++ +C + +GFG+ V
Sbjct: 314 NIISWTTLLSGYKQNALHKEAMELFTSMSK-FGLKPDMYACSSILTSCASLHALGFGTQV 372
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K L D +V+N+LI MY KC + + K+F++ ++V +N++I G+S G
Sbjct: 373 HAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQ 432
Query: 283 CESFDLLIKMMGCEEGFI-PDVITVVTVL 310
E + L I P ++T V++L
Sbjct: 433 WELHEALNIFRDMRFRLIRPSLLTFVSLL 461
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 9/216 (4%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A +L +C + G +VH + ND + LI MY+ C D+R+VFD
Sbjct: 352 ACSSILTSCASLHALGFGTQVHA-YTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDI 410
Query: 159 LKTRNLFQWNALVSGF----TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
++ +NA++ G+ T+ EL+ + L+IF ++ ++P TF +++A +
Sbjct: 411 FAAADVVLFNAMIEGYSRLGTQWELH-EALNIFRDMRFRL-IRPSLLTFVSLLRASASLT 468
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+G +HG+ K GL D+F +ALI +Y C +++ +F+ M ++LV WNS+
Sbjct: 469 SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFA 528
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G+ + + E+ +L +++ E PD T ++
Sbjct: 529 GYVQQSENEEALNLFLELQLSRER--PDEFTFANMV 562
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 3/182 (1%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F D + T LI Y G +R VFD+L ++ W ++SG K L +F
Sbjct: 179 FDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFY 238
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
+L D + PD + V+ AC + + G +H + GL D + N LI Y KC
Sbjct: 239 QLMEDN-VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKC 297
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
V KLF MP +N++SW +++ G+ +N E+ +L M + G PD+ +
Sbjct: 298 GRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM--SKFGLKPDMYACSS 355
Query: 309 VL 310
+L
Sbjct: 356 IL 357
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 4/181 (2%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D ++ LI +YS G + +R+VF+ + RNL W+ +VS + +Y + L +F+E
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGS--GVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
+ P+ + I+AC G+ G + K G DV+V LI Y K
Sbjct: 138 RTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDG 197
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
++ +F+ +PE++ V+W ++I G + G S S L ++M E+ +PD + TV
Sbjct: 198 NIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM--EDNVVPDGYILSTV 255
Query: 310 L 310
L
Sbjct: 256 L 256
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 88/179 (49%), Gaps = 3/179 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ A G+ +++G+ H + N +I N L+ MY+ CG P D+ + FDS +R
Sbjct: 561 MVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNA-LLDMYAKCGSPEDAHKAFDSAASR 619
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+++S + + L + ++ S+ ++P+ TF V+ AC V G
Sbjct: 620 DVVCWNSVISSYANHGEGKKALQMLEKMMSEG-IEPNYITFVGVLSACSHAGLVEDGLKQ 678
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSENG 280
+ + G+ + ++++ G+ + + +L E MP + + W S++ G ++ G
Sbjct: 679 FELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAG 737
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VHG GL D ++SN LI +Y + + K+FE MPERNLVSW++++ + +G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 282 SCESF 286
ES
Sbjct: 126 YEESL 130
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 144/270 (53%), Gaps = 14/270 (5%)
Query: 41 RSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEAT 100
R +F E S SL + + +T EE+++L+ L + +E ++ ++
Sbjct: 119 RQVFDEMPSRSLVSWNT--------MIGSLTQNGEENEALDLLLQMQREGTPFSEFTISS 170
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L AC + + + +H + N F+ T L+ +Y+ CG D+ VF+S+
Sbjct: 171 --VLCACAAKCALSECQLLHAFAIKAAMDLNVFVA-TALLDVYAKCGLMKDAVCVFESMP 227
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ W+++ +G+ +NE+Y L++F + + +T LK D F VI AC G+A + G
Sbjct: 228 DRSVVTWSSMAAGYVQNEMYEQALALFRK-AWETGLKHDQFLMSSVICACAGLAAMIEGK 286
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
V+ + +K G ++FV+++LI MY KC +EE K+F + +RN+V WN++I G S +
Sbjct: 287 QVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHA 346
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S E L KM + G P+ +T V+VL
Sbjct: 347 RSLEVMILFEKMQ--QMGLSPNDVTFVSVL 374
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C K + GK H + D + + LI MYS CG +R+VFD + +R
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILL-MGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSR 128
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP-DNFTFPCVIKACGGIADVGFGSG 221
+L WN ++ T+N + L + +++ E P FT V+ AC +
Sbjct: 129 SLVSWNTMIGSLTQNGEENEALDLLLQM--QREGTPFSEFTISSVLCACAAKCALSECQL 186
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H A K + +VFV+ AL+ +Y KC +++ V +FE MP+R++V+W+S+ G+ +N
Sbjct: 187 LHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEM 246
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L K E G D + +V+
Sbjct: 247 YEQALALFRK--AWETGLKHDQFLMSSVI 273
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 5/169 (2%)
Query: 145 LCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT--ELKPDNFT 202
+C F +S R + + + +FQ+ +L T+ S VE T + + +
Sbjct: 6 VCHFASNSGRYREKGEGKRIFQFLSLRVCTTQFFASLSSSSCIVECEKPTTKDFNATHVS 65
Query: 203 FPC-VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
F ++K C + G H MGL D+ SN LI MY KC V+ ++F+ M
Sbjct: 66 FVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEM 125
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
P R+LVSWN++I ++NG E+ DLL++M EG T+ +VL
Sbjct: 126 PSRSLVSWNTMIGSLTQNGEENEALDLLLQMQ--REGTPFSEFTISSVL 172
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 4/167 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK+V+ L+S S SN F+ ++ LI MY+ CG +S +VF ++ RN+ WNA++SG +
Sbjct: 285 GKQVNALLSKSGFCSNIFVASS-LIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLS 343
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK-MGLIGD 234
++ +V+ +F E L P++ TF V+ ACG + V G + K L +
Sbjct: 344 RHARSLEVMILF-EKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPN 402
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS-WNSIICGFSENG 280
VF + ++ + + E L +P S W S++ +G
Sbjct: 403 VFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHG 449
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 118/208 (56%), Gaps = 4/208 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT-R 162
L+ C K ++ GK +H+ + S F ++ +++ LI Y C + VF +
Sbjct: 10 LRTCTSSKLLKQGKLIHQRI-FSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTNDCPL 68
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNAL+S +T N + + L +F +L+ ++ ++PD +T+P V+KACGG+ V +G +
Sbjct: 69 DVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRI 128
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K GLI DVFV ++L+ MY KC + +KLF+ P+R++ WN++I + ++G +
Sbjct: 129 HNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKA 188
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ KM E GF P+ +T V+
Sbjct: 189 EMALKTFDKMK--ELGFEPNSVTFTVVV 214
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 118/209 (56%), Gaps = 4/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V+L+ACG + G+R+H + T D + + L+ MY+ C +D+ ++FD
Sbjct: 111 VVLKACGGLGRVIYGRRIHNHL-LKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQ 169
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ WNA++S + K+ L F ++ + +P++ TF V+ +C + ++ G
Sbjct: 170 RDVGCWNAVISCYFKDGKAEMALKTFDKMK-ELGFEPNSVTFTVVVSSCTRLLNLERGKE 228
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH + ++ D FV +AL+ MYGKC +E ++FE +P +N ++WN++I G+S G
Sbjct: 229 VHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGD 288
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S +LL++M +EG P ++T+ +++
Sbjct: 289 SRSCIELLMRMN--DEGTKPTLMTLTSII 315
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ A + GK +H + + D I+ LI Y CG+ + +F ++
Sbjct: 314 IIYASSRSVQLRHGKFIHGYI-LRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKN 372
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN ++SG + L I+ + + +KPD TF + AC +A + G +
Sbjct: 373 EVVSWNVMISGHVMVGNHIQALHIYDNMK-EHHVKPDALTFSSTLSACSQLAALDKGREL 431
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H L + V AL+ MY KC V+E KLF +P+R+LVSW S+I + +G +
Sbjct: 432 HYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQA 491
Query: 283 CESFDLLIKM 292
E+ L +M
Sbjct: 492 SEALRLFDEM 501
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 4/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V++ +C ++E GK VH + + F+++ L+ MY CG ++ VF+ +
Sbjct: 212 VVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSA-LVDMYGKCGCLEMAKEVFEKIPR 270
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N WNA+++G++ + + + ++ D KP T +I A + G
Sbjct: 271 KNAITWNAMITGYSLKGDSRSCIELLMRMN-DEGTKPTLMTLTSIIYASSRSVQLRHGKF 329
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG + + D+F+ +LI Y KC +V +F + + +VSWN +I G G
Sbjct: 330 IHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGN 389
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ + M E PD +T + L
Sbjct: 390 HIQALHIYDNMK--EHHVKPDALTFSSTL 416
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L +A D+ +G+ +H +V + S F+ N+ L+ MYS+ GF + +VF+ + R
Sbjct: 142 LFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNS-LVHMYSVFGFAESAYQVFEIMSYR 200
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN++++GF N + + L+++ E+ S+ ++PD FT ++ AC + + G V
Sbjct: 201 DRVAWNSVINGFALNGMPNEALTLYREMGSEG-VEPDGFTMVSLLSACVELGALALGERV 259
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K+GL+ + SNAL+ +Y KC + K+F+ M ER++VSW S+I G + NG
Sbjct: 260 HMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLG 319
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L ++ +G P IT V VL
Sbjct: 320 NEALKLFGELE--RQGLKPSEITFVGVL 345
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
++F+ ++ N+F WN ++ GF ++E + + +F ++ + + + PD TFP + KA +
Sbjct: 90 QIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKL 149
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
DV G G+H + + G FV N+L+ MY F E ++FE+M R+ V+WNS+I
Sbjct: 150 MDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVI 209
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
GF+ NG E+ L +M EG PD T+V++L
Sbjct: 210 NGFALNGMPNEALTLYREM--GSEGVEPDGFTMVSLL 244
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 113/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C ++I++G+++H L S T F +D ++ LI MYS G+ +RRV + LK +
Sbjct: 351 ILRTCTCTREIDLGEQIHSL-SVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK 409
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W ++++G+ ++E D L+ F E+ + PDN I C GI + G +
Sbjct: 410 DVVSWTSMIAGYVQHECCKDALAAFKEMQK-CGIWPDNIGLASAISGCAGINAMRQGLQI 468
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G GDV + NAL+ +Y +C + E FE + ++ ++WN ++ GF+++G
Sbjct: 469 HARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLH 528
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + ++M + G +V T V+ L
Sbjct: 529 EEALKVFMRMD--QSGVKHNVFTFVSAL 554
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ C + G ++H + S +S D I L+ +Y+ CG ++ F+ ++ ++
Sbjct: 453 ISGCAGINAMRQGLQIHARIYVSG-YSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKD 511
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WN LVSGF ++ L+ + L +F+ + + +K + FTF + A +A++ G +H
Sbjct: 512 EITWNGLVSGFAQSGLHEEALKVFMRMDQ-SGVKHNVFTFVSALSASANLAEIKQGKQIH 570
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
K G + V NALI++YGKC E+ F M ERN VSWN+II S++G
Sbjct: 571 ARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGL 630
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL +M +EG P+ +T + VL
Sbjct: 631 EALDLFDQMK--KEGIKPNDVTFIGVL 655
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 110/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC D++ G ++H + + S+D+I+ L+ +Y CG + +F+S
Sbjct: 250 LLAACASLGDLQKGTQLHSYLFKAG-ISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT 308
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN ++ F + +F ++ + ++P+ FT+PC+++ C ++ G +
Sbjct: 309 NVVLWNLMLVAFGQINDLAKSFELFCQMQA-AGIRPNQFTYPCILRTCTCTREIDLGEQI 367
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H ++ K G D++VS LI MY K ++E+ ++ E++ E+++VSW S+I G+ ++
Sbjct: 368 HSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECC 427
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +M C G PD I + + +
Sbjct: 428 KDALAAFKEMQKC--GIWPDNIGLASAI 453
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 105/209 (50%), Gaps = 7/209 (3%)
Query: 104 LQAC-GHEKDIEIGKRVHELVSASTQFSNDF-IINTRLITMYSLCGFPLDSRRVFDSLKT 161
L+AC G+ + ++ +H A T+ + I+ LI +YS G L +RRVF+ L
Sbjct: 48 LRACRGNGRRWQVVPEIH--AKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSA 105
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R+ W A++SG+ +N L + L ++ ++ + P + V+ +C G
Sbjct: 106 RDNVSWVAMLSGYAQNGLGEEALGLYRQMHR-AGVVPTPYVLSSVLSSCTKAELFAQGRL 164
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K G ++FV NA+I +Y +C ++F MP R+ V++N++I G ++ G
Sbjct: 165 IHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGH 224
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ +M G PD +T+ ++L
Sbjct: 225 GEHALEIFEEMQF--SGLSPDCVTISSLL 251
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 8/232 (3%)
Query: 82 KALSLLQENLHNADLKEATGVL---LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
+AL L ++ +H A + VL L +C + G+ +H F ++ +
Sbjct: 126 EALGLYRQ-MHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQ-GYKHGFCSEIFVGNA 183
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+IT+Y CG + RVF + R+ +N L+SG + L IF E+ + L P
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF-SGLSP 242
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D T ++ AC + D+ G+ +H K G+ D + +L+ +Y KC VE + +F
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
N+V WN ++ F + +SF+L +M G P+ T +L
Sbjct: 303 NSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAA--GIRPNQFTYPCIL 352
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 6/142 (4%)
Query: 171 VSGFTKNELYTDVLSIFVELSSDTE-LKPDNFTFPCVIKACGGIADV-GFGSGVHGMAAK 228
++GF +E VLS+F + + L P F C ++AC G +H A
Sbjct: 13 LAGFLAHEDPAKVLSLFADKARQHGGLGP--LDFACALRACRGNGRRWQVVPEIHAKAVT 70
Query: 229 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
GL V N LI +Y K V ++FE + R+ VSW +++ G+++NG E+ L
Sbjct: 71 RGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGL 130
Query: 289 LIKMMGCEEGFIPDVITVVTVL 310
+M G +P + +VL
Sbjct: 131 YRQMH--RAGVVPTPYVLSSVL 150
>gi|297819366|ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323404|gb|EFH53825.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 591
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 118/209 (56%), Gaps = 5/209 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+ C D+ G ++H + S F +D ++ T L+ +YS C D+ +VFD + R+
Sbjct: 120 LKCCIKSGDLLGGLQIHGKI-FSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPQRD 178
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTE--LKPDNFTFPCVIKACGGIADVGFGSG 221
WN L+S + +N+ DVL +F ++ +D + +KPDN T ++AC + + FG
Sbjct: 179 TVSWNVLISCYLRNKRTRDVLVLFDKMKNDVDRCVKPDNVTCLLALQACANLGALDFGKQ 238
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH + GL G + +SN L++MY +C +++ ++F M ERN+VSW ++I G + NGF
Sbjct: 239 VHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYEVFNRMRERNVVSWTAMISGLAMNGF 298
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + +M+ + G P+ T+ +L
Sbjct: 299 GKEAIEAFNEML--KFGISPEEQTLTGLL 325
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 83/198 (41%), Gaps = 5/198 (2%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLD---SRRVFDSLKTRNLFQWNALVSG 173
+++H ++ ++ N + + + +L P D S RVF L N ++
Sbjct: 28 RQIHAVLLRTSLIRNSDVFH-HFFSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRA 86
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
F+ ++ + +F L + + + +K C D+ G +HG G +
Sbjct: 87 FSLSQTPCEGFRLFRALRRNISFPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLS 146
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
D + L+ +Y C + K+F+ +P+R+ VSWN +I + N + + L KM
Sbjct: 147 DSLLMTTLMDLYSTCENSTDACKVFDEIPQRDTVSWNVLISCYLRNKRTRDVLVLFDKMK 206
Query: 294 G-CEEGFIPDVITVVTVL 310
+ PD +T + L
Sbjct: 207 NDVDRCVKPDNVTCLLAL 224
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 113/214 (52%), Gaps = 14/214 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C +D++ GK +H V D +++ + Y+ C +++ VFD + R
Sbjct: 147 ILPGCSDLQDLKSGKEIHGFV-VRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHR 205
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+L S + L++F E+ D +KPD T C++ AC + D+ G +
Sbjct: 206 DVVTWNSLSSCYVNCGFPQKGLNVFREMVLDG-VKPDPVTVSCILSACSDLQDLKSGKAI 264
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII-----CGFS 277
HG A K G++ +VFVSNAL+ +Y C V E +F++MP RN+++WNS+ CGF
Sbjct: 265 HGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFP 324
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ G + + + MG G PD + + ++LP
Sbjct: 325 QKGLN------VFREMGL-NGVKPDPMAMSSILP 351
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 111/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +D++ GK +H N F+ N L+ +Y C +++ VFD + R
Sbjct: 248 ILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNA-LVNLYESCLCVREAQAVFDLMPHR 306
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN+L S + L++F E+ + +KPD ++ AC + D+ G +
Sbjct: 307 NVITWNSLASCYVNCGFPQKGLNVFREMGLNG-VKPDPMAMSSILPACSQLKDLKSGKTI 365
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A K G++ DVFV AL+ +Y C V E +F++MP RN+V+WNS+ + GF
Sbjct: 366 HGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFP 425
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ +M+ G PD++T++++L
Sbjct: 426 QKGLNVFREMV--LNGVKPDLVTMLSIL 451
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 97/181 (53%), Gaps = 2/181 (1%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A +L AC KD++ GK +H + D + T L+ +Y+ C +++ VFD
Sbjct: 345 AMSSILPACSQLKDLKSGKTIHGF-AVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDL 403
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ RN+ WN+L S + L++F E+ + +KPD T ++ AC + D+
Sbjct: 404 MPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNG-VKPDLVTMLSILHACSDLQDLKS 462
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G +HG A + G++ DVFV NAL+++Y KC V E +F+++P R + SWN I+ +
Sbjct: 463 GKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFT 522
Query: 279 N 279
N
Sbjct: 523 N 523
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 4/206 (1%)
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNL 164
+AC +D K+ H+ + S D I I Y C +RRVFD L R++
Sbjct: 48 KACAASRDALKVKQFHDDATRCGVMS-DVSIGNAFIHAYGKCKCVEGARRVFDDLVARDV 106
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
WN+L + + L++F ++ + ++K + T ++ C + D+ G +HG
Sbjct: 107 VTWNSLSACYVNCGFPQQGLNVFRKMGLN-KVKANPLTVSSILPGCSDLQDLKSGKEIHG 165
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCE 284
+ G++ DVFVS+A + Y KC V E +F++MP R++V+WNS+ + GF +
Sbjct: 166 FVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQK 225
Query: 285 SFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +M+ +G PD +TV +L
Sbjct: 226 GLNVFREMV--LDGVKPDPVTVSCIL 249
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 107/248 (43%), Gaps = 37/248 (14%)
Query: 82 KALSLLQENLHNADLKEATGVL--LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
K L++ +E + N + +L L AC +D++ GK +H + F+ N L
Sbjct: 427 KGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNA-L 485
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD------ 193
+++Y+ C +++ VFD + R + WN +++ + N+ Y L +F +++ D
Sbjct: 486 LSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADE 545
Query: 194 ----------------------------TELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
KPD T +++AC + G +H
Sbjct: 546 ITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCY 605
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
+ D+ +NAL+ MY KC + +F++MP +++ SWN++I +G E+
Sbjct: 606 VFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEA 665
Query: 286 FDLLIKMM 293
L KM+
Sbjct: 666 LSLFEKML 673
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
+KPD F V KAC D H A + G++ DV + NA I YGKC VE
Sbjct: 36 IKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGAR 95
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++F+ + R++V+WNS+ + GF + ++ KM + P +TV ++LP
Sbjct: 96 RVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANP--LTVSSILP 149
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 4/175 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC + + +GK +H V + D L+ MY+ CG SR VFD + +
Sbjct: 586 ILRACSLSECLRMGKEIHCYVFRHWK-DWDLARTNALVDMYAKCGGLSLSRNVFDMMPIK 644
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++F WN ++ + + LS+F ++ + +KPD+ TF CV+ AC V G +
Sbjct: 645 DVFSWNTMIFANGMHGNGKEALSLFEKMLL-SMVKPDSATFTCVLSACSHSMLVEEGVQI 703
Query: 223 HGMAAKMGLI-GDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICG 275
++ L+ + ++ +Y + +EE + MP E ++W + + G
Sbjct: 704 FNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAG 758
>gi|302801528|ref|XP_002982520.1| hypothetical protein SELMODRAFT_116755 [Selaginella moellendorffii]
gi|300149619|gb|EFJ16273.1| hypothetical protein SELMODRAFT_116755 [Selaginella moellendorffii]
Length = 694
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 1/207 (0%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + + G+ +H LV D ++ T L+TMY CG +R +F + RN
Sbjct: 119 LNACIGSRSLSNGRLIHALV-LERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPERN 177
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WNA+V+ T N + + + +F + + ++P +F V+ A + G +H
Sbjct: 178 VVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTREALAEGRRIH 237
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
M + L+ + V+NAL+ MYG+C V + ++F M R+LVSWN++I ++++G +C
Sbjct: 238 EMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAMERRDLVSWNAMISAYAQSGLAC 297
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E +L +M DVI+ T++
Sbjct: 298 EVVNLFHRMRAERSMAARDVISWNTMI 324
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 108/208 (51%), Gaps = 2/208 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+AC + +E GK++H VSA +D + ++ MY C + VF ++ R
Sbjct: 16 LLEACDSPEFLEDGKQIHARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRER 75
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN ++ ++ YT L++ + + + PD TF + AC G + G +
Sbjct: 76 DLISWNNAIAANAESGDYTFTLALLKSMQLEG-MAPDKVTFVSALNACIGSRSLSNGRLI 134
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + + G+ GDV + AL+ MYG+C +E ++F MPERN+VSWN+++ + N
Sbjct: 135 HALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHF 194
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L +M+ P ++ +TVL
Sbjct: 195 AEAIELFKRMVAVAM-VEPTRVSFITVL 221
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL C + G+ +H ++ + + S+D I+ ++ MY CG +R +F+
Sbjct: 358 LLSVCDSRALLRQGETIHRCVIDQTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSH 417
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
RNL WN+++S + + + + + L PD TF ++ AC V G
Sbjct: 418 RNLASWNSMISAYALHGRAEQAFDLSERMRREGVL-PDRVTFITLLNACVAGGAVRQGKM 476
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H GL D V+NAL+ Y KC ++ LF + R++VSWN II GF+ NG
Sbjct: 477 IHARIIDSGLEKDTVVANALVNFYSKCGNLDTATSLFGALDYRDVVSWNGIIAGFAHNGH 536
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ + M ++G PD IT +T+L
Sbjct: 537 AREALKSMWLMQ--QDGVRPDAITFLTIL 563
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 111/247 (44%), Gaps = 43/247 (17%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L A + + G+R+HE++ S + N L+TMY CG D+ RVF +++ R
Sbjct: 220 VLNAVTTREALAEGRRIHEMIQERQLLSQIEVANA-LVTMYGRCGGVGDAERVFSAMERR 278
Query: 163 NLFQWNA-------------------------------------LVSGFTKNELYTDVLS 185
+L WNA +++G+ + LS
Sbjct: 279 DLVSWNAMISAYAQSGLACEVVNLFHRMRAERSMAARDVISWNTMITGYVQAGDPFSALS 338
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG--LIGDVFVSNALIA 243
IF + + ++ + TF ++ C A + G +H L D V+ A++
Sbjct: 339 IFKRMLLEG-IRGNQVTFMSLLSVCDSRALLRQGETIHRCVIDQTPELSSDPIVAAAIVN 397
Query: 244 MYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
MYGKC ++ LFE RNL SWNS+I ++ +G + ++FDL +M EG +PD
Sbjct: 398 MYGKCGELDTARHLFEDTSHRNLASWNSMISAYALHGRAEQAFDLSERMR--REGVLPDR 455
Query: 304 ITVVTVL 310
+T +T+L
Sbjct: 456 VTFITLL 462
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI-GDVFVSNALIAMYGKCAFVE 252
+ L P+ TF +++AC + G +H + + L+ DV V+NA++ MY KC +
Sbjct: 4 SSLDPNRVTFLALLEACDSPEFLEDGKQIHARVSALQLLESDVPVANAVMGMYRKCERAD 63
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +F M ER+L+SWN+ I +E+G + LL M EG PD +T V+ L
Sbjct: 64 LAMAVFSEMRERDLISWNNAIAANAESGDYTFTLALLKSMQ--LEGMAPDKVTFVSAL 119
>gi|218199092|gb|EEC81519.1| hypothetical protein OsI_24907 [Oryza sativa Indica Group]
Length = 460
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 109/211 (51%), Gaps = 7/211 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL--K 160
LLQAC + G+ +H +A F + L+ +Y CG + +VFD + +
Sbjct: 122 LLQACARLLALREGECLHA-EAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVR 180
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RNL WN++++ F N +VL++F E+ + PD FT V+ AC + G
Sbjct: 181 GRNLVSWNSMLNSFAANGRPNEVLTVFWEMLG-VDFAPDGFTIVSVLTACAEFGALALGR 239
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSEN 279
VH K+GL+ + VSNALI +Y KC V + ++FE M R +VSW S+I G + N
Sbjct: 240 RVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAAN 299
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
GF E+ +L M E +P IT+V VL
Sbjct: 300 GFGKEALELFSLME--REKLVPTEITMVGVL 328
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 72/127 (56%), Gaps = 4/127 (3%)
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
+ +EL PD T+P +++AC + + G +H AAK G + VFV N+L+ +Y
Sbjct: 102 VALELHRRRLALPDTHTYPPLLQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLY 161
Query: 246 GKCAFVEEMVKLFEVMP--ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
G C E K+F+ MP RNLVSWNS++ F+ NG E + +M+G + F PD
Sbjct: 162 GACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVD--FAPDG 219
Query: 304 ITVVTVL 310
T+V+VL
Sbjct: 220 FTIVSVL 226
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 108/195 (55%), Gaps = 4/195 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+++H S T D + LI MYS CG D++ VFD + + WN++++G+
Sbjct: 251 GRQLHS-CSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYA 309
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+ + LS++ E+ D+ +K DNFTF +I+ C +A + H + G D+
Sbjct: 310 LHGYSEEALSMYYEMR-DSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDI 368
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+ AL+ +Y K +E+ +F++MP +N++SWN++I G+ +G E+ ++ +M+
Sbjct: 369 VANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERML-- 426
Query: 296 EEGFIPDVITVVTVL 310
EG +P+ +T + VL
Sbjct: 427 HEGMVPNHVTFLAVL 441
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 106/198 (53%), Gaps = 8/198 (4%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
E L+ AC K I K+V + S ++++ N R++ M+ CG +D+RR+FD
Sbjct: 132 ETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRN-RVLLMHVKCGMMIDARRLFD 190
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFV---ELSSDTELKPDNFTFPCVIKACGGIA 214
+ +N+ WN ++ G Y + +F+ + SD + F +I+A G+
Sbjct: 191 EMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSR----MFVTMIRASAGLG 246
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+ G +H + K G+ GDVFV+ ALI MY KC +E+ +F+ MPE+ V WNSII
Sbjct: 247 LIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIA 306
Query: 275 GFSENGFSCESFDLLIKM 292
G++ +G+S E+ + +M
Sbjct: 307 GYALHGYSEEALSMYYEM 324
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%)
Query: 180 YTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSN 239
Y + L +F L + D+ T+ ++ AC G+ + V GL D ++ N
Sbjct: 111 YHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRN 170
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
++ M+ KC + + +LF+ MPE+N++SWN+II G + G E+F L + M
Sbjct: 171 RVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMM 223
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 124/235 (52%), Gaps = 10/235 (4%)
Query: 82 KALSLLQENLHNADLKEA--TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
+A+ L LH + L + +L+ACG + + G+ VH + FS++ ++ R+
Sbjct: 120 EAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSR-ALKLGFSSNRLVRLRI 178
Query: 140 ITMYSLCGFPLDSRRVFDSLK----TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
+ +Y CG D+RRVF+ + ++ W A++ GF +NE L F + +
Sbjct: 179 MELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGEN- 237
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
++P+ FT CV+ AC + + G VH K + ++FV NALI MY +C ++E
Sbjct: 238 VRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQ 297
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ M +R+++++N++I G S NG S ++ +L M+G P +T V VL
Sbjct: 298 TVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVG--RRLRPTNVTFVGVL 350
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
R+F N++ + AL+ GF + Y + + ++ + ++ L PDN+ ++KACG
Sbjct: 92 RIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESIL-PDNYLMASILKACGSQ 150
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE----RNLVSW 269
+ G VH A K+G + V ++ +YGKC + + ++FE MPE ++ V W
Sbjct: 151 LALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCW 210
Query: 270 NSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++I GF N + + + M G E P+ T+V VL
Sbjct: 211 TAMIDGFVRNEETNRALEAFRGMQG--ENVRPNEFTIVCVL 249
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +EIG+ VH + N F+ N LI MYS CG +++ VFD +K R
Sbjct: 248 VLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNA-LINMYSRCGSIDEAQTVFDEMKDR 306
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
++ +N ++SG + N + +F + L+P N TF V+ AC GG+ D GF
Sbjct: 307 DVITYNTMISGLSMNGKSRQAIELF-RVMVGRRLRPTNVTFVGVLNACSHGGLVDFGF-E 364
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
H MA + + ++ + G+ +EE L M
Sbjct: 365 IFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTM 405
>gi|297827241|ref|XP_002881503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327342|gb|EFH57762.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 669
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 103/187 (55%), Gaps = 9/187 (4%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL- 190
D + ++LI+ Y+ + VFD + RN F +NAL+ +T E+Y D S+F+
Sbjct: 56 DNFLASKLISFYTRQNRFHQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWI 115
Query: 191 ----SSDTELKPDNFTFPCVIKACGGIADVGFGS---GVHGMAAKMGLIGDVFVSNALIA 243
S +PD+ + CV+KA G D GS VHG + G DVFV N LI
Sbjct: 116 GSSCYSSGAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGSDSDVFVGNGLIT 175
Query: 244 MYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
Y KC +E K+F+ M +R++VSWNS+I G+S++G + L M+GC + F P+
Sbjct: 176 YYTKCDNIESARKVFDEMSDRDVVSWNSMISGYSQSGSFEDCKKLYKAMLGCSD-FKPNE 234
Query: 304 ITVVTVL 310
+TV++VL
Sbjct: 235 VTVISVL 241
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 98/178 (55%), Gaps = 1/178 (0%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
+ ++VH V S+ F+ N LIT Y+ C +R+VFD + R++ WN+++SG+
Sbjct: 150 LARQVHGFVIRGGSDSDVFVGNG-LITYYTKCDNIESARKVFDEMSDRDVVSWNSMISGY 208
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
+++ + D ++ + ++ KP+ T V++ACG +D+ FG VH + + D
Sbjct: 209 SQSGSFEDCKKLYKAMLGCSDFKPNEVTVISVLQACGQSSDLVFGMEVHKKMIENHIQMD 268
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ + NA+I Y KC ++ LF+ M E++ V++ +II G+ +G E+ L +M
Sbjct: 269 LSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEM 326
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 50/273 (18%)
Query: 75 EESKSLNKALSLLQENLHNADLK--EATGV-LLQACGHEKDIEIGKRVHELVSASTQFSN 131
E+ K L KA+ L +D K E T + +LQACG D+ G VH+ +
Sbjct: 215 EDCKKLYKAM------LGCSDFKPNEVTVISVLQACGQSSDLVFGMEVHKKM-IENHIQM 267
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRN---------------------------- 163
D + +I Y+ CG +R +FD + ++
Sbjct: 268 DLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEME 327
Query: 164 ---LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
L WNA++SG +N + +V++ F E+ +P+ T ++ + +++ G
Sbjct: 328 SIGLSTWNAVISGLMQNNHHEEVINSFREMIR-CGSRPNTVTLSSLLPSLTYSSNLKGGK 386
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H A + G +++V+ ++I Y K F+ ++F+ +R+L+ W +II ++ +G
Sbjct: 387 EIHAFAIRNGSDNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIVWTAIITAYAVHG 446
Query: 281 FS---CESFDLLIKMMGCEEGFIPDVITVVTVL 310
S C FD M C G PD +T+ VL
Sbjct: 447 DSDSACSLFD----QMQC-LGTKPDNVTLTAVL 474
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 29/193 (15%)
Query: 41 RSIFKE---KSSLSLSAKTNNASTQGLHFLQEITTLCEESKSL-----NKALSLLQENLH 92
R++F E K S++ A + GL ++E L E +S+ N +S L +N H
Sbjct: 289 RALFDEMSEKDSVTYGAIISGYMAHGL--VKEAMALFSEMESIGLSTWNAVISGLMQNNH 346
Query: 93 NADLKEATGVLLQACG----------------HEKDIEIGKRVHELVSASTQFSNDFIIN 136
+ ++ + +++ CG + +++ GK +H + N+ +
Sbjct: 347 HEEVINSFREMIR-CGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGS-DNNIYVT 404
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
T +I Y+ GF L ++RVFD+ K R+L W A+++ + + S+F ++
Sbjct: 405 TSIIDNYAKLGFLLGAQRVFDNCKDRSLIVWTAIITAYAVHGDSDSACSLFDQMQC-LGT 463
Query: 197 KPDNFTFPCVIKA 209
KPDN T V+ A
Sbjct: 464 KPDNVTLTAVLSA 476
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++++C + G+ +H V + F +D + T L++ Y CG ++R+VFD ++ R
Sbjct: 117 VIKSCADLVALRHGRIIHGHVLVNG-FGSDVYVQTALMSFYGKCGVLCNARKVFDKMRDR 175
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+++SG+ +N + + +F + + ++P++ TF V+ AC + G V
Sbjct: 176 SVVTWNSMISGYEQNGFAKEAIRLFDRMK-EIGVEPNSATFVSVLSACAHLGAFILGCWV 234
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A GL +V + +LI MY +C V + ++F+ M ERN+V+W ++I G+ NG+
Sbjct: 235 HEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYG 294
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L +M G +P+ IT V VL
Sbjct: 295 SQAVELFHEMR--RNGLLPNSITFVAVL 320
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 111/219 (50%), Gaps = 6/219 (2%)
Query: 92 HNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLD 151
H A +LLQA +++ +VH V S + F++ T+L+ + G
Sbjct: 7 HKHPHSPAYNLLLQA---GPRLKLLHQVHAHVIVSGYGCSRFLL-TKLLNLACAAGSISY 62
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+R++F + + F + +L+ +K ++ F + + P N+TF VIK+C
Sbjct: 63 TRQIFLIVPNPDSFLFTSLIRSTSKFHNFSVYSLYFYTRMVLSNVAPSNYTFTSVIKSCA 122
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
+ + G +HG G DV+V AL++ YGKC + K+F+ M +R++V+WNS
Sbjct: 123 DLVALRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKVFDKMRDRSVVTWNS 182
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+I G+ +NGF+ E+ L +M E G P+ T V+VL
Sbjct: 183 MISGYEQNGFAKEAIRLFDRMK--EIGVEPNSATFVSVL 219
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 116/216 (53%), Gaps = 5/216 (2%)
Query: 95 DLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRR 154
D+ +GV AC K G +VH L + + F D + ++ +Y C +++
Sbjct: 352 DVISLSGVF-SACAEVKGYFQGLQVHCL-AVKSGFDVDVCVRNAILDLYGKCKALVEAYL 409
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VF ++ R+ WNA+++ +NE Y D ++ E+ + ++PD+FT+ V+KAC G+
Sbjct: 410 VFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLR-SGMEPDDFTYGSVLKACAGLQ 468
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+ +G VHG A K GL D FVS+ ++ MY KC + E KL + + + LVSWNSII
Sbjct: 469 SLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIIS 528
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
GFS S E+ +M+ + G PD T TVL
Sbjct: 529 GFSLTKQSEEAQRFFSEML--DMGVKPDHFTYATVL 562
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 115/210 (54%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L+AC + +E G VH + + D +++ ++ MY CG +++++ D +
Sbjct: 458 GSVLKACAGLQSLEYGLVVHG-KAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIG 516
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ L WN+++SGF+ + + F E+ D +KPD+FT+ V+ C +A + G
Sbjct: 517 GQELVSWNSIISGFSLTKQSEEAQRFFSEML-DMGVKPDHFTYATVLDTCANLATIELGK 575
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG K ++GD ++S+ L+ MY KC + + + +FE + + VSWN++ICG++ +G
Sbjct: 576 QIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHG 635
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ ++ +M +P+ T V VL
Sbjct: 636 QGLEALEMFERMQ--RANVVPNHATFVAVL 663
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 33/211 (15%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN--------- 163
+ G+ H + S F+ N L+ MY+ CG + VFD++ R+
Sbjct: 35 LTTGQAAHARMLVSGFMPTTFVSNC-LLQMYARCGGTAHAHGVFDTMPHRDTVSWNTMLT 93
Query: 164 ----------------------LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF 201
+ WN L+SG+ ++ ++ + + + +E+S + D
Sbjct: 94 AYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSR-RGVALDRT 152
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
T ++K+CGG+ D+ G +H +A K GL DV +AL+ MYGKC +++ ++ F M
Sbjct: 153 TLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGM 212
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKM 292
ERN VSW + I G +N +L ++M
Sbjct: 213 GERNSVSWGAAIAGCVQNEQYTRGMELFVQM 243
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 4/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
VLL++CG D+ +G ++H L + T D + L+ MY C D+ R F +
Sbjct: 156 VLLKSCGGLDDLALGVQIHAL-AVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGE 214
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
RN W A ++G +NE YT + +FV++ L + ++C + +
Sbjct: 215 RNSVSWGAAIAGCVQNEQYTRGMELFVQMQR-LGLGVSQPAYASAFRSCAAMPCLSTARQ 273
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H A K D V A++ +Y K + + + F +P N+ + N+++ G G
Sbjct: 274 LHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGL 333
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M GF DVI++ V
Sbjct: 334 GAEAMQLFQFMTRSGVGF--DVISLSGVF 360
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 202 TFPCVIKACG--GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
TF + + C G + + G H G + FVSN L+ MY +C +F+
Sbjct: 19 TFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFD 78
Query: 260 VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
MP R+ VSWN+++ + G + + L M PDV++ T++
Sbjct: 79 TMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPD------PDVVSWNTLI 123
>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 102/172 (59%), Gaps = 2/172 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+I+ Y+ G +R +FD + R+ WN++++G+T+N + +F E+ S + KP
Sbjct: 343 MISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKP 402
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D T V ACG + ++G G+ + + + + V N+LI+MY +C +++ V +F
Sbjct: 403 DEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIF 462
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ M R+LVS+N++I GF+E+G ES +LL+KM E+G PD IT + +L
Sbjct: 463 QEMATRDLVSYNTLISGFAEHGHGMESIELLLKMK--EDGIEPDRITYIAIL 512
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 40/239 (16%)
Query: 107 CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQ 166
CG+E+ E H V + S + I T +IT ++ G +R FD + R++
Sbjct: 178 CGNEE--EASTLFH--VMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVS 233
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG-SGVHGM 225
WNA++SG+ + + + +F ++ S ++PD T+ VI +C + D S V +
Sbjct: 234 WNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKL 293
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV------------------------- 260
+G + FV AL+ M+ KC +E K+FE
Sbjct: 294 DDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDL 353
Query: 261 ---------MPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
MP+R+ VSWNS+I G+++NG S ++ L +M+ E+ PD +T+V+V
Sbjct: 354 PSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDS-KPDEVTMVSVF 411
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 11/185 (5%)
Query: 82 KALSLLQENLHNADLK--EATGV-LLQACGHEKDIEIGK-RVHELVSASTQFSNDFIINT 137
KA+ L +E + + D K E T V + ACGH ++ +G V L Q S +
Sbjct: 386 KAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQIS--ISVYN 443
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
LI+MYS CG D+ +F + TR+L +N L+SGF ++ + + + +++ D ++
Sbjct: 444 SLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDG-IE 502
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
PD T+ ++ AC +G G + DV +I M G+ +EE +KL
Sbjct: 503 PDRITYIAILTACSHAGLLGEGQRLFESIK----FPDVDHYACMIDMLGRAGRLEEAMKL 558
Query: 258 FEVMP 262
+ MP
Sbjct: 559 IQSMP 563
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 52/233 (22%)
Query: 84 LSLLQENLHNADLKEATG---VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLI 140
+SL + L + ++K T V++++ G E + + H L S + D + ++
Sbjct: 88 VSLFKHMLRHCNIKPNTSFYSVMMKSAGSESMLFLA---HVLKSG---YDRDHYVRNGIL 141
Query: 141 TMYSLCGFPLD-SRRVFDSLKTRNLFQWNALVSGFTK--NELYTDVLSIFVELSSDTELK 197
+Y+ G P++ +R++FD + R + WN ++SG+ K NE + S + D E+
Sbjct: 142 GIYAKYG-PIEFARKLFDEMPDRTVADWNVMISGYWKCGNE---EEASTLFHVMGDQEIS 197
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
+ T+ +I G A K L MY
Sbjct: 198 RNVITWTTMIT---------------GHAKKGNL--------KTARMY------------ 222
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ MPER++VSWN+++ G+++ G E+ L M+ PD T VTV+
Sbjct: 223 FDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDML-SPGNVQPDETTWVTVI 274
>gi|115444451|ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group]
gi|113535536|dbj|BAF07919.1| Os02g0167200, partial [Oryza sativa Japonica Group]
Length = 526
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 143/280 (51%), Gaps = 22/280 (7%)
Query: 35 RNKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNA 94
R+ HS R++F + S S++ T N G C+E + + + L + H
Sbjct: 88 RDVHSARAMFDKISRPSVT--TWNTLLSGY---------CQEEQHQD-TIELFRRMQHQN 135
Query: 95 DLKEAT--GVLLQACGHEKDIEIGKRVHELVSASTQF--SNDFIINTRLITMYSLCGFPL 150
+ T V+L +C ++ G++VH SAS +F ND + + L+ MYS CG
Sbjct: 136 VQPDRTTLAVILSSCSKLGILDFGRQVH---SASVRFLLHNDMFVASGLVDMYSKCGQIG 192
Query: 151 DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
+R +F+ + R++ WN+++SG T + L + F ++ + + P ++ +I +C
Sbjct: 193 IARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENG-IMPTESSYASMINSC 251
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
++ + G +H K G +V+V +ALI MY KC +++ F+ M +N+V+WN
Sbjct: 252 SRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWN 311
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+I G+++NG ++ +L M+ E+ PD +T + VL
Sbjct: 312 EMIHGYAQNGLGDKAVELFEYMLTTEQK--PDAVTFIAVL 349
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 228 KMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFD 287
+ G D V N+LI MY KC ++E VK+FE +P +VSWN +I GF + G ++ +
Sbjct: 1 RKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVE 60
Query: 288 LLIKMMGCEEGFIPDVITVVTVL 310
+L M E GF P+ +T +L
Sbjct: 61 VLSLMQ--EAGFEPNEVTYSNLL 81
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F +D + LI MY+ C ++ +VF+SL + + WN L++GF + + + +
Sbjct: 4 FGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEV-L 62
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVS--NALIAMYG 246
L + +P+ T+ ++ +C D VH A I V+ N L++ Y
Sbjct: 63 SLMQEAGFEPNEVTYSNLLASCIKARD------VHSARAMFDKISRPSVTTWNTLLSGYC 116
Query: 247 KCAFVEEMVKLFEVMPERNL 266
+ ++ ++LF M +N+
Sbjct: 117 QEEQHQDTIELFRRMQHQNV 136
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 108/195 (55%), Gaps = 4/195 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+++H S T D + LI MYS CG D++ VFD + + WN++++G+
Sbjct: 251 GRQLHS-CSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYA 309
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+ + LS++ E+ D+ +K DNFTF +I+ C +A + H + G D+
Sbjct: 310 LHGYSEEALSMYYEMR-DSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDI 368
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+ AL+ +Y K +E+ +F++MP +N++SWN++I G+ +G E+ ++ +M+
Sbjct: 369 VANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERML-- 426
Query: 296 EEGFIPDVITVVTVL 310
EG +P+ +T + VL
Sbjct: 427 HEGMVPNHVTFLAVL 441
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 105/195 (53%), Gaps = 2/195 (1%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
E L+ AC K I K+V + S ++++ N R++ M+ CG +D+RR+FD
Sbjct: 132 ETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRN-RVLLMHVKCGMMIDARRLFD 190
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
+ +N+ WN ++ G Y + +F+ + D + F +I+A G+ +
Sbjct: 191 EMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFS-DAGSRMFVTMIRASAGLGLIF 249
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G +H + K G+ GDVFV+ ALI MY KC +E+ +F+ MPE+ V WNSII G++
Sbjct: 250 AGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYA 309
Query: 278 ENGFSCESFDLLIKM 292
+G+S E+ + +M
Sbjct: 310 LHGYSEEALSMYYEM 324
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%)
Query: 180 YTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSN 239
Y + L +F L + D+ T+ ++ AC G+ + V GL D ++ N
Sbjct: 111 YHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRN 170
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
++ M+ KC + + +LF+ MPE+N++SWN+II G + G E+F L + M
Sbjct: 171 RVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMM 223
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 118/214 (55%), Gaps = 6/214 (2%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
+ +LL C +++ + G+RVH + T + ++TRLI +Y+ C +R VFD
Sbjct: 11 DGYNMLLNECVNKRAVREGQRVHAHM-IKTCYLPPVYLSTRLIILYTKCECLGCARHVFD 69
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVE-LSSDTELKPDNFTFPCVIKACGGIADV 216
++ RN+ W A++SG+++ ++ L +FV+ L SDTE P+ FTF V+ +C G +
Sbjct: 70 EMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTE--PNEFTFATVLSSCTGFSGF 127
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G +H K +FV ++L+ MY K + E +FE +PER++VS +II G+
Sbjct: 128 ELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGY 187
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ G E+ +L ++ EG + +T ++L
Sbjct: 188 AQLGLDEEALELFCRLQ--REGMSSNYVTYASLL 219
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 134/273 (49%), Gaps = 19/273 (6%)
Query: 41 RSIF---KEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLK 97
R +F +E++ +S +A + S +G S++L+ + +L+ + +
Sbjct: 65 RHVFDEMRERNVVSWTAMISGYSQRGF-----------ASEALHLFVQMLRSDTEPNEFT 113
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
AT +L +C E+G+++H + + N + + L+ MY+ G ++R VF+
Sbjct: 114 FAT--VLSSCTGFSGFELGRQIHSHI-FKRNYENHIFVGSSLLDMYAKAGRIHEARGVFE 170
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
L R++ A++SG+ + L + L +F L + + + T+ ++ A G+A +
Sbjct: 171 CLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREG-MSSNYVTYASLLTALSGLAALD 229
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G VH + L V + N+LI MY KC + K+F MP R ++SWN+++ G+S
Sbjct: 230 HGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYS 289
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++G E L K+M E PD +T + VL
Sbjct: 290 KHGKGIEVVKLF-KLMREENKVKPDSVTFLAVL 321
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 112/242 (46%), Gaps = 20/242 (8%)
Query: 38 HSLRSIFK---EKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNA 94
H R +F+ E+ +S +A + + GL + ++L L +E + +
Sbjct: 163 HEARGVFECLPERDVVSCTAIISGYAQLGL-----------DEEALELFCRLQREGMSSN 211
Query: 95 DLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRR 154
+ A+ LL A ++ GK+VH V + ++ LI MYS CG +R+
Sbjct: 212 YVTYAS--LLTALSGLAALDHGKQVHSHV-LRCELPFYVVLQNSLIDMYSKCGNLNYARK 268
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GG 212
+F+++ R + WNA++ G++K+ +V+ +F + + ++KPD+ TF V+ C GG
Sbjct: 269 IFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGG 328
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNS 271
+ D G M + + +I + G+ VEE +L + MP E W S
Sbjct: 329 LEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGS 388
Query: 272 II 273
++
Sbjct: 389 LL 390
>gi|297734415|emb|CBI15662.3| unnamed protein product [Vitis vinifera]
Length = 657
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 108/195 (55%), Gaps = 4/195 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+++H S T D + LI MYS CG D++ VFD + + WN++++G+
Sbjct: 251 GRQLHS-CSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYA 309
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+ + LS++ E+ D+ +K DNFTF +I+ C +A + H + G D+
Sbjct: 310 LHGYSEEALSMYYEMR-DSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDI 368
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+ AL+ +Y K +E+ +F++MP +N++SWN++I G+ +G E+ ++ +M+
Sbjct: 369 VANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERML-- 426
Query: 296 EEGFIPDVITVVTVL 310
EG +P+ +T + VL
Sbjct: 427 HEGMVPNHVTFLAVL 441
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 105/195 (53%), Gaps = 2/195 (1%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
E L+ AC K I K+V + S ++++ N R++ M+ CG +D+RR+FD
Sbjct: 132 ETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRN-RVLLMHVKCGMMIDARRLFD 190
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
+ +N+ WN ++ G Y + +F+ + D + F +I+A G+ +
Sbjct: 191 EMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFS-DAGSRMFVTMIRASAGLGLIF 249
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G +H + K G+ GDVFV+ ALI MY KC +E+ +F+ MPE+ V WNSII G++
Sbjct: 250 AGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYA 309
Query: 278 ENGFSCESFDLLIKM 292
+G+S E+ + +M
Sbjct: 310 LHGYSEEALSMYYEM 324
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%)
Query: 180 YTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSN 239
Y + L +F L + D+ T+ ++ AC G+ + V GL D ++ N
Sbjct: 111 YHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRN 170
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
++ M+ KC + + +LF+ MPE+N++SWN+II G + G E+F L + M
Sbjct: 171 RVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMM 223
>gi|255539102|ref|XP_002510616.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551317|gb|EEF52803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 390
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 106/192 (55%), Gaps = 3/192 (1%)
Query: 119 VHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNE 178
+H V S +++ F+ + ++ Y G D++ +FD L ++L WN+L+SGF++
Sbjct: 65 LHSRVIKSLSYNHGFV-GDQFVSAYVRLGCTKDAQNLFDELPEKDLVSWNSLISGFSRRG 123
Query: 179 LYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVS 238
+ L++F ++ T LKP+ TF +I AC +G G VHG A K+G I +V V
Sbjct: 124 DLDNCLNVFSKMKYQTILKPNEVTFISLISACTDAGALGMGKYVHGFAVKLGTILEVKVV 183
Query: 239 NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEG 298
NALI +YGK ++ ++FE M +NLVSWNSII + GF+ + I M G
Sbjct: 184 NALICLYGKSGCLDAACRIFEEMQVQNLVSWNSIIAVHVQRGFAQDGLRYFIVMR--RAG 241
Query: 299 FIPDVITVVTVL 310
+ D T+V +L
Sbjct: 242 IVSDQATLVILL 253
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 94/208 (45%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ AC + +GK VH ++N LI +Y G + R+F+ ++ +
Sbjct: 151 LISACTDAGALGMGKYVHGFAVKLGTILEVKVVNA-LICLYGKSGCLDAACRIFEEMQVQ 209
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL WN++++ + D L F+ + + D T +++AC + +
Sbjct: 210 NLVSWNSIIAVHVQRGFAQDGLRYFIVMRR-AGIVSDQATLVILLQACESVGLRKLVEAI 268
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG GL ++ V AL+ +Y + K+F M ++ V+W +++ ++ +G
Sbjct: 269 HGYIFGCGLNMNLAVETALLKLYANLGMLSASHKVFREMVNKDAVAWTAMLACYAVHGCG 328
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L M+ EG +PD +T +L
Sbjct: 329 KEAIELFELMV--REGAVPDHVTFTHLL 354
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 207 IKACGGIADVGF--GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
I +C I+ G + ++ G +GD FVS Y + ++ LF+ +PE+
Sbjct: 53 IASCNSISYCGVLHSRVIKSLSYNHGFVGDQFVS-----AYVRLGCTKDAQNLFDELPEK 107
Query: 265 NLVSWNSIICGFSENG 280
+LVSWNS+I GFS G
Sbjct: 108 DLVSWNSLISGFSRRG 123
>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 583
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 115/208 (55%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++++C ++IGK VH + + F D + L+T YS CG +R+VFD + +
Sbjct: 113 VIKSCADLSALKIGKGVH-CHAVVSGFGLDTYVQAALVTFYSKCGDMEAARQVFDRMPEK 171
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+LVSGF +N L D + +F ++ ++ +PD+ TF ++ AC + GS V
Sbjct: 172 SVVAWNSLVSGFEQNGLAEDAIRVFYQMR-ESGFEPDSATFVSLLSACAQTGAISLGSWV 230
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H GL +V + ALI +Y +C V + ++F+ M E N+ +W ++I + +G+
Sbjct: 231 HQYIVSEGLDVNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYG 290
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ DL KM + G IP+ +T V VL
Sbjct: 291 KQAVDLFNKMED-DCGSIPNNVTFVAVL 317
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 110/216 (50%), Gaps = 8/216 (3%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSAS-----TQFSNDFIINTRLITMYSLCGFPLDSRR 154
T V + +E + G RV +L T + + T+LIT+ +
Sbjct: 3 TKVAANSAAYEAIVRAGPRVKQLQQVHAHLIVTSYGRSRSLLTKLITLACSARAIAYTHL 62
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
+F S+ + F +N+++ +K L ++ + + S + + P N+TF VIK+C ++
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLS-SNVSPSNYTFTSVIKSCADLS 121
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+ G GVH A G D +V AL+ Y KC +E ++F+ MPE+++V+WNS++
Sbjct: 122 ALKIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEAARQVFDRMPEKSVVAWNSLVS 181
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
GF +NG + ++ + +M E GF PD T V++L
Sbjct: 182 GFEQNGLAEDAIRVFYQMR--ESGFEPDSATFVSLL 215
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 2/158 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC I +G VH+ + S + + T LI +YS CG +R VFD +K
Sbjct: 214 LLSACAQTGAISLGSWVHQYI-VSEGLDVNVKLGTALINLYSRCGDVGKAREVFDKMKET 272
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A++S + + + +F ++ D P+N TF V+ AC V G V
Sbjct: 273 NVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNVTFVAVLSACAHAGLVEDGRSV 332
Query: 223 HG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
+ M LI V ++ M G+ F++E + +
Sbjct: 333 YKRMTESYRLIPGVEHHVCIVDMLGRAGFLDEAYRFIQ 370
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 110/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ + C KDI +GK+VH + S D I + +I MY CG L R FD L++R
Sbjct: 230 IFRLCASLKDITLGKQVHAQMLKS-DIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSR 288
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W ++++ + +NE + + L++F ++ D + P+ +T + + G++ + G +
Sbjct: 289 NVVSWTSIIAAYFQNEFFEEALNLFSKMEIDC-IPPNEYTMAVLFNSAAGLSALCLGDQL 347
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K GL G+V V NALI MY K + +F M N+++WN+II G S +G
Sbjct: 348 HARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLG 407
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + MM E P+ +T + V+
Sbjct: 408 KEALSMFQDMMATGER--PNYVTFIGVI 433
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 5/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN--TRLITMYSLCGFPLDSRRVFDSLK 160
LL+ K+++ G+ +H ++ + D +N LI +Y C +R++FDS+
Sbjct: 25 LLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMP 84
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN+ W+AL++G+ +N +V +F ++ + P+ + I +C V G
Sbjct: 85 RRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVE-GK 143
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
HG A K GL +V NALI +Y KC+ V +++ +P ++ +N ++ G ++
Sbjct: 144 QCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHT 203
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ D+L ++ EG + T VT+
Sbjct: 204 HMAEAVDVLKLIIS--EGIEWNNATYVTIF 231
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 96/189 (50%), Gaps = 3/189 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ +C + +E GK+ H S + ++ N LI +YS C + ++ ++ +
Sbjct: 131 ISSCDSQMYVE-GKQCHGYALKSGLEFHQYVKNA-LIQLYSKCSDVGAAIQILYTVPGND 188
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+F +N +V+G ++ + + + + S+ ++ +N T+ + + C + D+ G VH
Sbjct: 189 IFCYNLVVNGLLQHTHMAEAVDVLKLIISEG-IEWNNATYVTIFRLCASLKDITLGKQVH 247
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
K + DV++ +++I MYGKC V F+ + RN+VSW SII + +N F
Sbjct: 248 AQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFE 307
Query: 284 ESFDLLIKM 292
E+ +L KM
Sbjct: 308 EALNLFSKM 316
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 126/239 (52%), Gaps = 19/239 (7%)
Query: 81 NKALSLLQENLHNADLK--EATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
N+A+ L + + ++K E T V +L AC +D+ + KR+HE + F ++NT
Sbjct: 168 NEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHG-FGRHVVLNT 226
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L+ +Y CG +R +FD + +NLF WN +++G ++ Y + L +F E+ + +K
Sbjct: 227 VLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKG-IK 285
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
D T ++ AC + + G +H K + DV + AL+ MY KC +E +++
Sbjct: 286 GDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQV 345
Query: 258 FEVMPERNLVSWNSII-----CGFSENGFSCESFD-LLIKMMGCEEGFIPDVITVVTVL 310
F MPE+++++W ++I CG +EN + FD + IK G PD IT V VL
Sbjct: 346 FHEMPEKDVMTWTALILGLAMCGQAENAL--QYFDEMHIK------GVKPDAITFVGVL 396
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 3/195 (1%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK++H S F++D L+ MYS CG + +R+VFD ++ + + W ++
Sbjct: 104 GKQIH-CHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHA 162
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+ + + + +F + +KP+ T V+ AC D+ +H + G V
Sbjct: 163 QWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHV 222
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
++ L+ +Y KC V+ LF+ E+NL SWN +I G E+ E+ L +M
Sbjct: 223 VLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQ-- 280
Query: 296 EEGFIPDVITVVTVL 310
+G D +T+ ++L
Sbjct: 281 TKGIKGDKVTMASLL 295
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 79/159 (49%), Gaps = 5/159 (3%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+R VF + + N+++ G T L+ + L + E+ L PD +TFP + K+C
Sbjct: 41 ARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQG-LIPDRYTFPSLFKSCR 99
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
++ G +H + K+G D + N L+ MY C + K+F+ M ++ +VSW +
Sbjct: 100 NSSE---GKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWAT 156
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+I ++ E+ L +MM E P+ +T+V VL
Sbjct: 157 MIGVHAQWDQPNEAVRLFDRMMK-SENVKPNEVTLVNVL 194
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 5/162 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC H +E+GK +H + + D + T L+ MY+ CG + +VF + +
Sbjct: 294 LLLACTHLGALELGKWLHAYIK-KQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEK 352
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
++ W AL+ G + L F E+ +KPD TF V+ AC G D G S
Sbjct: 353 DVMTWTALILGLAMCGQAENALQYFDEMHIKG-VKPDAITFVGVLAACSHAGFVDEGI-S 410
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ M+ G+ + L+ + G+ + E +L + MP
Sbjct: 411 HFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMP 452
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 114/207 (55%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L++C + +GK VH + +D + L+ +Y+ G +D++R+F+ + +
Sbjct: 244 LKSCLGLEAFNVGKSVHGCALKGC-YDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTD 302
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L W+ +++ + +++ + L +F+ + T + P+NFTF V++AC + G +H
Sbjct: 303 LIPWSLMIARYAQSDRSKEALDLFLRMRQ-TSVVPNNFTFASVLQACASSVSLDLGKQIH 361
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
K GL +VFVSNA++ +Y KC +E +KLFE +P+RN V+WN+II G+ + G
Sbjct: 362 SCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGE 421
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L M+ E P +T +VL
Sbjct: 422 RAMNLFTHML--EHDMQPTEVTYSSVL 446
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 115/210 (54%), Gaps = 8/210 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQAC +++GK++H V SN F+ N ++ +Y+ CG +S ++F+ L R
Sbjct: 344 VLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNA-IMDVYAKCGEIENSMKLFEELPDR 402
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WN ++ G+ + +++F + + +++P T+ V++A +A + G +
Sbjct: 403 NDVTWNTIIVGYVQLGDGERAMNLFTHML-EHDMQPTEVTYSSVLRASASLAALEPGLQI 461
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + K D V+N+LI MY KC + + F+ M +R+ VSWN++ICG+S +G S
Sbjct: 462 HSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMS 521
Query: 283 CESFDL--LIKMMGCEEGFIPDVITVVTVL 310
E+ +L +++ C+ P+ +T V VL
Sbjct: 522 MEALNLFDMMQHTDCK----PNKLTFVGVL 547
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 104/204 (50%), Gaps = 8/204 (3%)
Query: 73 LCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSND 132
L + +++N +L+ ++ ++ ++ +L+A +E G ++H L + T ++ D
Sbjct: 417 LGDGERAMNLFTHMLEHDMQPTEVTYSS--VLRASASLAALEPGLQIHSL-TIKTMYNKD 473
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
++ LI MY+ CG D+R FD + R+ WNA++ G++ + + + L++F ++
Sbjct: 474 TVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLF-DMMQ 532
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVH--GMAAKMGLIGDVFVSNALIAMYGKCAF 250
T+ KP+ TF V+ AC A + + H M+ + + ++ + G+
Sbjct: 533 HTDCKPNKLTFVGVLSACSN-AGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGR 591
Query: 251 VEEMVKLF-EVMPERNLVSWNSII 273
+E +KL E+ + +++ W +++
Sbjct: 592 FDEAMKLIGEIAYQPSVMVWRALL 615
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 93/225 (41%), Gaps = 8/225 (3%)
Query: 88 QENLHNADLKEATGVLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLC 146
Q+ L D +L Q + D GK +H ++ T S D L+ Y
Sbjct: 26 QQCLSALDSHSYAHMLQQIIRNGADPIAGKHLHCHILKRGT--SLDLFAQNILLNFYVQS 83
Query: 147 GFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD-TELKPDNFTFPC 205
D+ ++FD + N + L G++++ + L + + + E+ P F F
Sbjct: 84 NSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNP--FVFTT 141
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
++K + +H K+G D FV ALI Y V+ +F+ + ++
Sbjct: 142 LLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKD 201
Query: 266 LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+VSW ++ ++EN F ES L +M G+ P+ T+ L
Sbjct: 202 MVSWTGMVACYAENCFYEESLQLFNQMR--IMGYKPNNFTISGAL 244
>gi|302764952|ref|XP_002965897.1| hypothetical protein SELMODRAFT_85072 [Selaginella moellendorffii]
gi|300166711|gb|EFJ33317.1| hypothetical protein SELMODRAFT_85072 [Selaginella moellendorffii]
Length = 318
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 112/208 (53%), Gaps = 7/208 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C K ++ GK++H + S Q D I+ LI MY CG D++R+FD + +R
Sbjct: 13 VLRVCAKNKALQQGKKIHSYIRDSGQ-EQDRILGNHLIEMYLKCGSLRDAQRMFDEMVSR 71
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W +++S +++ Y L +F + ++ +KPDN TF V+ CG ++ + G +
Sbjct: 72 DAILWTSMISAYSERGHYKMALKLFQRMQGES-VKPDNVTFVTVLNCCGKMSALQEGKLI 130
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G D+ V AL+ MYGKC + + K+FE + +++++WN+++ + ++
Sbjct: 131 HSQLTGNGFENDLIVKTALLNMYGKCGSLTDARKVFEEIQGKDIITWNAMLSVYVQHSAY 190
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L KM P V T VTV+
Sbjct: 191 EEALELYRKM-----ELTPSVSTFVTVI 213
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 110/209 (52%), Gaps = 7/209 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L CG ++ GK +H ++ + F ND I+ T L+ MY CG D+R+VF+ ++ +
Sbjct: 114 VLNCCGKMSALQEGKLIHSQLTGNG-FENDLIVKTALLNMYGKCGSLTDARKVFEEIQGK 172
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA++S + ++ Y + L ++ ++ EL P TF VI AC G + G V
Sbjct: 173 DIITWNAMLSVYVQHSAYEEALELYRKM----ELTPSVSTFVTVINACAGATALEDGRQV 228
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + GL + VS+AL+ MYGKC +E+ K+F E + V+W +I +++ S
Sbjct: 229 HAVVTARGLETEDAVSSALLNMYGKCGSLEDAAKVFWKRREYDDVAWAHMISFYTQWHRS 288
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ L ++M EG D T L
Sbjct: 289 KEALGLF-RLMRL-EGVRVDKFAFTTTLS 315
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
K D+ T+ V++ C + G +H G D + N LI MY KC + + +
Sbjct: 4 KTDSATYARVLRVCAKNKALQQGKKIHSYIRDSGQEQDRILGNHLIEMYLKCGSLRDAQR 63
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ M R+ + W S+I +SE G + L +M G E PD +T VTVL
Sbjct: 64 MFDEMVSRDAILWTSMISAYSERGHYKMALKLFQRMQG--ESVKPDNVTFVTVL 115
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC +E G++VH +V+A + D +++ L+ MY CG D+ +VF +
Sbjct: 212 VINACAGATALEDGRQVHAVVTARGLETED-AVSSALLNMYGKCGSLEDAAKVFWKRREY 270
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
+ W ++S +T+ + L +F L ++ D F F + AC
Sbjct: 271 DDVAWAHMISFYTQWHRSKEALGLF-RLMRLEGVRVDKFAFTTTLSAC 317
>gi|357117008|ref|XP_003560268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 512
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 112/208 (53%), Gaps = 6/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSN-DFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L AC E++ G+ +H S+ DF +++ L++MY P +RRVF+ ++ R
Sbjct: 171 LSACMSERE---GRELHCFAMKGGMCSDIDFHVSSALVSMYCRACQPGLARRVFERMQRR 227
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A+V G+ +N ++ D + F ++ + + P+ V+ A G+ + G+ V
Sbjct: 228 NVVSWTAMVGGYAENRMFEDAIKAFRQMWTIGGILPNRVALISVLSAVEGLTVLAGGAQV 287
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A +MGL G+V ++NALIAMY KC + ++F+ ++++SW S++ G+ +G
Sbjct: 288 HGFAVRMGLYGEVSLNNALIAMYAKCGALHYARRVFDGTWHKDVISWGSMVLGYGLHGMG 347
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M G PD I + VL
Sbjct: 348 TEAVTLFDHMHA--TGVKPDSIVGLGVL 373
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 119/219 (54%), Gaps = 15/219 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +++G ++H L S + + +I ++ +Y CG+ ++++++F+ ++T
Sbjct: 266 VLSACCVMLTLDLGAQIHSL-SIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETL 324
Query: 163 NLFQWNALVSGFTKN-ELYTD----------VLSIFVELSSDTELKPDNFTFPCVIKACG 211
NL WNA+++G K +L D L++F +L + +KPD FTF V+ C
Sbjct: 325 NLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYR-SGMKPDLFTFSSVLSVCS 383
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
+ + G +HG K G++ DV V AL++MY KC +++ K F MP R ++SW S
Sbjct: 384 NLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTS 443
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+I GF+ +G S ++ L M G P+ +T V VL
Sbjct: 444 MITGFARHGLSQQALQLFEDMRLV--GIKPNQVTFVGVL 480
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ C + +H + T F D + T L+ +YS CG + +VFD+L R
Sbjct: 64 LLQECIDRNLATEARMIHGHI-VKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRR 122
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W L++G+ +N L +F+++ + P N+T V+ AC + + FG V
Sbjct: 123 NVNAWTTLLTGYVQNSHPLLALQLFIKML-EAGAYPSNYTLGIVLNACSSLQSIEFGKQV 181
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K + D + N+L + Y K +E +K F+++ E++++SW S+I +NG +
Sbjct: 182 HAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQA 241
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
S + M+ +G P+ T+ +VL
Sbjct: 242 ARSLSFFMDML--SDGMKPNEYTLTSVL 267
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 96/179 (53%), Gaps = 4/179 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
G++L AC + IE GK+VH L+ F D I L + YS + + F +
Sbjct: 163 GIVLNACSSLQSIEFGKQVHAYLIKYHIDF--DTSIGNSLSSFYSKFRRLEFAIKAFKII 220
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
K +++ W +++S N LS F+++ SD +KP+ +T V+ AC + + G
Sbjct: 221 KEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDG-MKPNEYTLTSVLSACCVMLTLDLG 279
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
+ +H ++ K+G + + N+++ +Y KC ++ E KLFE M NLV+WN++I G ++
Sbjct: 280 AQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAK 338
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 105/184 (57%), Gaps = 3/184 (1%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
++ G+ VH V + L+ +Y+ G D +VF+++K + + WN L+S
Sbjct: 515 VKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLIS 574
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
FT+N + L +FV++ + L PD+++ + ACG I+ G+ +HG K G
Sbjct: 575 IFTRNGQPEEALLLFVQMQTQG-LMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNF 633
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
D FV NALI MY KC FV K+FE + E++LV+WNS+ICGFS+NG+S E+ L +M
Sbjct: 634 ND-FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQM 692
Query: 293 -MGC 295
M C
Sbjct: 693 YMNC 696
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 112/204 (54%), Gaps = 5/204 (2%)
Query: 107 CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQ 166
CG ++G ++H + + F NDF+ N LI MY+ CGF + ++F+ +K ++L
Sbjct: 611 CGTISFSQLGAQIHGYIIKTGNF-NDFVQNA-LIDMYAKCGFVHSANKMFEKIKEKSLVT 668
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
WN+++ GF++N + +++F ++ + +K D TF VI+AC + + G VH
Sbjct: 669 WNSMICGFSQNGYSVEAITLFDQMYMNC-VKMDKLTFLSVIQACSHLGYLEKGKWVHHKL 727
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
GL D ++ AL MY KC ++ +F+ M ER++VSW+ +I G+ +G +
Sbjct: 728 IMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATI 787
Query: 287 DLLIKMMGCEEGFIPDVITVVTVL 310
L +M+G G P+ IT + +L
Sbjct: 788 SLFNQMLG--SGIKPNDITFMHIL 809
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 57/221 (25%)
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
+T+LI Y+ G S+RVFD+ + F W L+ + + + +S++ E+ +
Sbjct: 383 STKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQ 442
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAA---------------------------- 227
+ NF FP V+KAC G D+ G G +G A+
Sbjct: 443 TQISNFVFPSVLKACSGFGDLSVG-GKNGQASEGLDMFSQMISEAVEPDSVTMLSVTEAC 501
Query: 228 ------KMGLIGDV--------------------FVSNALIAMYGKCAFVEEMVKLFEVM 261
++G +G V F+ AL+ +Y + + K+FE +
Sbjct: 502 SELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETI 561
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
E+ ++SWN++I F+ NG E+ L ++M +G +PD
Sbjct: 562 KEKTILSWNTLISIFTRNGQPEEALLLFVQMQ--TQGLMPD 600
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++QAC H +E GK VH + D ++T L MYS CG + VFD + R
Sbjct: 707 VIQACSHLGYLEKGKWVHHKL-IMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSER 765
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
++ W+ +++G+ + +S+F ++ + +KP++ TF ++ AC
Sbjct: 766 SIVSWSVMIAGYGMHGQINATISLFNQMLG-SGIKPNDITFMHILSAC 812
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 119/210 (56%), Gaps = 5/210 (2%)
Query: 103 LLQACGHE-KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL+ C + K + K VH+ + + D ++ LI +Y C +R VF++
Sbjct: 9 LLRECTNSTKSLRRIKLVHQRI-LTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 67
Query: 162 R-NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R +++ WN+L+SG++KN ++ D L +F L + + PD+FTFP VIKA G + G
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H + K G + DV V+++L+ MY K E +++F+ MPER++ SWN++I F ++G
Sbjct: 128 MIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSG 187
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ +L +M GF P+ +++ +
Sbjct: 188 EAEKALELFGRMES--SGFEPNSVSLTVAI 215
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 106/196 (54%), Gaps = 4/196 (2%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
+G+ +H LV S + D ++ + L+ MY+ +S +VFD + R++ WN ++S F
Sbjct: 125 LGRMIHTLVVKSG-YVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCF 183
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
++ L +F + S + +P++ + I AC + + G +H K G D
Sbjct: 184 YQSGEAEKALELFGRMES-SGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELD 242
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
+V++AL+ MYGKC +E ++F+ MP ++LV+WNS+I G+ G S ++L +M+
Sbjct: 243 EYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI- 301
Query: 295 CEEGFIPDVITVVTVL 310
EG P T+ ++L
Sbjct: 302 -IEGTRPSQTTLTSIL 316
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 10/211 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +++ GK +H V S + D +N LI +Y CG + VF +
Sbjct: 315 ILMACSRSRNLLHGKFIHGYVIRSV-VNADIYVNCSLIDLYFKCGEANLAETVFSKTQKD 373
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
WN ++S + + + ++ ++ S +KPD TF V+ AC +A + G +
Sbjct: 374 VAESWNVMISSYISVGNWFKAVEVYDQMVS-VGVKPDVVTFTSVLPACSQLAALEKGKQI 432
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H ++ L D + +AL+ MY KC +E ++F +P++++VSW +I + +G
Sbjct: 433 HLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQP 492
Query: 283 CES---FDLLIKMMGCEEGFIPDVITVVTVL 310
E+ FD + K G PD +T++ VL
Sbjct: 493 REALYQFDEMQKF-----GLKPDGVTLLAVL 518
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 4/210 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V + AC +E GK +H F D +N+ L+ MY C +R VF +
Sbjct: 213 VAISACSRLLWLERGKEIHRKC-VKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPR 271
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++L WN+++ G+ + I + + +P T ++ AC ++ G
Sbjct: 272 KSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT-RPSQTTLTSILMACSRSRNLLHGKF 330
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG + + D++V+ +LI +Y KC +F + SWN +I + G
Sbjct: 331 IHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGN 390
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ ++ +M+ G PDV+T +VLP
Sbjct: 391 WFKAVEVYDQMVSV--GVKPDVVTFTSVLP 418
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 5/163 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E GK++H +S S + D ++ + L+ MYS CG ++ R+F+S+ +
Sbjct: 416 VLPACSQLAALEKGKQIHLSISES-RLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK 474
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGS 220
++ W ++S + + + L F E+ LKPD T V+ ACG G+ D G
Sbjct: 475 DVVSWTVMISAYGSHGQPREALYQFDEMQK-FGLKPDGVTLLAVLSACGHAGLIDEGL-K 532
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 263
M +K G+ + + +I + G+ + E ++ + PE
Sbjct: 533 FFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPE 575
>gi|51091970|dbj|BAD35499.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 665
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 114/210 (54%), Gaps = 6/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G ++ A G+ K G++ H V + + I+ + + MY+ CG +++R+VFD ++
Sbjct: 299 GSMMTALGNSKRGSQGRQAHAQV-VTRGLCGNVIVESSTLDMYAKCGLMVEARKVFDRMQ 357
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN AL+ G+ +N Y V+++F E+ + D ++ V++AC G++ V G
Sbjct: 358 VRNEVSRCALLGGYCQNGEYEKVIALFREMDKEDG---DWYSLGTVLRACAGLSSVKPGK 414
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H +M DV V +AL+ +Y KC V+ +FE RN ++WN++I GF++NG
Sbjct: 415 EIHCRFLRMAGWRDVVVESALVDLYAKCGAVDYAYSVFEASTVRNTITWNAMIGGFAQNG 474
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L +M+ EG PD I+ + VL
Sbjct: 475 HGERAINLFNRMV--REGPRPDYISFIGVL 502
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 113/235 (48%), Gaps = 10/235 (4%)
Query: 81 NKALSLLQENLHNADLK-----EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
+AL+ L++ L AD A ++AC +D G +H V F +D ++
Sbjct: 172 RRALASLRDMLAGADDDVSPNAHALSAAVKACAVLRDRNAGACLHGSVLVRG-FGDDGVV 230
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
+ L+ MY P D+R+VF+ ++ + + +L+S F +N+ + + + F +
Sbjct: 231 LSSLVDMYGHVAAPGDARKVFEEMRAPDGICYTSLISAFVRNDWFEEAVRWFRSMLMMNG 290
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
++PD TF ++ A G G H GL G+V V ++ + MY KC + E
Sbjct: 291 VRPDGCTFGSMMTALGNSKRGSQGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGLMVEAR 350
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F+ M RN VS +++ G+ +NG E L + M E+G D ++ TVL
Sbjct: 351 KVFDRMQVRNEVSRCALLGGYCQNG-EYEKVIALFREMDKEDG---DWYSLGTVL 401
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA-FVEEMVKLFEVMPERNLVSWNSIICGF 276
G +HG AA+ GL+ D +++NAL+A Y + + ++ F+ +P R++V+ +SI+ F
Sbjct: 106 LGCCLHGRAARAGLLADRYLANALLAFYVRLPRHLPHALRAFDDLPRRDVVAHSSILAAF 165
Query: 277 SENGFSCESFDLLIKMM-GCEEGFIPDV 303
G + L M+ G ++ P+
Sbjct: 166 LRAGMPRRALASLRDMLAGADDDVSPNA 193
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 118/210 (56%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L ACG E GK++H + T + + + + L+ MYS C + VF +
Sbjct: 285 GSILTACGALAASEEGKQIHAY-TIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMT 343
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+N+ W A++ G+ +N + + +F E+ +D +KP++FT VI +C +A + G+
Sbjct: 344 CKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDG-IKPNDFTLGSVISSCANLASLEEGA 402
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H MA GL + VS+AL+ +YGKC +E+ +LF+ MP + VS+ +++ G+++ G
Sbjct: 403 QFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFG 462
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ DL KM+ +G P+ +T + VL
Sbjct: 463 KAKETIDLFEKML--LKGVKPNGVTFIGVL 490
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 96/180 (53%), Gaps = 4/180 (2%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
N + NT +IT C ++R VF+++ R+ W +V+G T+N L ++ L +F +
Sbjct: 214 NVVMYNT-MITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRM 272
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
++ + D +TF ++ ACG +A G +H + G++FV +AL+ MY KC
Sbjct: 273 RAEG-VGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRS 331
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +F M +N++SW ++I G+ +NG E+ + +M +G P+ T+ +V+
Sbjct: 332 IRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQ--TDGIKPNDFTLGSVI 389
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 96/247 (38%), Gaps = 73/247 (29%)
Query: 133 FIINTRLITMYSLCG-FPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+++N L+T Y+ G PL +RR+FD++ NLF NAL+S L D+ +F +
Sbjct: 46 YVLN-HLLTAYARSGRLPL-ARRLFDAMPDPNLFTRNALLSALAHARLLPDMDRLFASMP 103
Query: 192 -------------------------------------SDTELKPDNFTFPCVIKACGGIA 214
++P T ++ A +
Sbjct: 104 QRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMAASALG 163
Query: 215 DVGFGSGVH-------------------GMAAKMGLIGD------------VFVSNALIA 243
D G VH M AKMGLIGD V + N +I
Sbjct: 164 DRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMIT 223
Query: 244 MYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
+C VEE +FE M +R+ ++W +++ G ++NG E+ D+ +M EG D
Sbjct: 224 GLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRA--EGVGIDQ 281
Query: 304 ITVVTVL 310
T ++L
Sbjct: 282 YTFGSIL 288
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 126/238 (52%), Gaps = 36/238 (15%)
Query: 104 LQACGHEKDIEIGKRVHEL-VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L AC + D+EIG+ +H L + QF N +++N LI+MY+ CG D VF +++ +
Sbjct: 562 LSACANIGDVEIGRVIHSLAIKTGCQF-NSYVMNG-LISMYAKCGNVEDGSHVFRTIRVK 619
Query: 163 NLFQWNALVSGFTKNEL------------------YTDVLSIFV-----ELSSD------ 193
+ WN+L+SG ++N + +T ++S +V E++ D
Sbjct: 620 DTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDML 679
Query: 194 -TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+KP+ T ++ ACG + + G H + K+G +FV N+LI MY KC + E
Sbjct: 680 ARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGY-E 738
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +FE MPE +L++WN+++ G ++NG E+ + +M EG +PD ++ + VL
Sbjct: 739 DGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQME--VEGILPDQMSFLGVL 794
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+I Y+ G +++ +F + +N W A+++GF +NE + L + +EL + P
Sbjct: 495 IIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSV-P 553
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ +F + AC I DV G +H +A K G + +V N LI+MY KC VE+ +F
Sbjct: 554 SDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVF 613
Query: 259 EVMPERNLVSWNSIICGFSEN 279
+ ++ VSWNS+I G SEN
Sbjct: 614 RTIRVKDTVSWNSLISGLSEN 634
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
++T Y C ++R +FD + RN W ++SG+ Y + +FV++ T +P
Sbjct: 301 VVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCR-TVARP 359
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D F V+ A G+ D+ + +A K G GDV V +A++ Y + ++ + F
Sbjct: 360 DQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFF 419
Query: 259 EVMPERNLVSWNSIICGFSENG 280
E MPERN SW ++I F++ G
Sbjct: 420 ETMPERNEYSWTTMIAAFAQCG 441
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 89/174 (51%), Gaps = 7/174 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL ACG+ I++G++ H L+ F + LITMY CG+ D VF+ +
Sbjct: 693 LLSACGNLGAIKLGEQFHALI-FKLGFDTFLFVGNSLITMYFKCGYE-DGFCVFEEMPEH 750
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
+L WNA++ G +N L + + IF ++ + L PD +F V+ AC G+ D G+
Sbjct: 751 DLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGIL-PDQMSFLGVLCACSHAGLVDEGWAH 809
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSII 273
+ M K G++ V+ ++ + G+ ++ E L E MP + + V W +++
Sbjct: 810 -FNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALL 862
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 42/174 (24%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
T L+T Y+ G ++R VF+S+ RN+ WNA++SG+ +N + +F E+
Sbjct: 237 TILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEM------ 290
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
P+ +V N+++ Y C + E +
Sbjct: 291 -PEK---------------------------------NVASWNSVVTGYCHCYRMSEARE 316
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
LF+ MPERN VSW +I G+ E++D+ +KM C PD V VL
Sbjct: 317 LFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKM--CRTVARPDQSIFVVVL 368
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 123 VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTD 182
++ T + D ++ + ++ Y+ G + F+++ RN + W +++ F + D
Sbjct: 386 IAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDD 445
Query: 183 VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD------VF 236
+ ++ + T T ++ A + G K LI D V
Sbjct: 446 AIQLYERVPEQTVA-----TKTAMMTAYAQV----------GRIQKARLIFDEILNPNVV 490
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
NA+IA Y + ++E LF+ MP +N SW ++I GF +N S E+ +LLI++
Sbjct: 491 AWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIEL 546
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 53/154 (34%)
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
F NTR+ + L G ++RRVF+ + R++ WN++++G+++N
Sbjct: 172 FQCNTRIQELGRL-GRVEEARRVFNEMIQRDVVSWNSMINGYSQN--------------- 215
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSN------ALIAMYG 246
G + L+ D FV L+ Y
Sbjct: 216 -------------------------------GKVDEARLLFDAFVGKNIRTWTILLTGYA 244
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
K +EE ++FE M ERN+VSWN++I G+ +NG
Sbjct: 245 KEGRIEEAREVFESMTERNVVSWNAMISGYVQNG 278
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+F N I G+ VEE ++F M +R++VSWNS+I G+S+NG
Sbjct: 171 LFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNG 216
>gi|255568478|ref|XP_002525213.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535510|gb|EEF37179.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 501
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 112/200 (56%), Gaps = 4/200 (2%)
Query: 111 KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNAL 170
+D+ G + H L S SN ++ + LIT+Y CG ++ ++F + RN+ W A+
Sbjct: 120 RDLPGGIQFHCLAITSGFISNSYV-GSSLITLYGKCGKLDNAHKLFHEMPVRNVVTWTAI 178
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
+SGF + E DV + ++ LKP++FTF ++ AC G +G G+ H +MG
Sbjct: 179 ISGFAQ-ECQVDVCLELFSVMRNSTLKPNDFTFTSLLSACTGSGALGQGTSAHCQIIQMG 237
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
+ V+NALI+MY K V + +F + +++VSWNS+I G++++G + ++ DL
Sbjct: 238 FHSYLHVANALISMYCKSGSVHDAFYIFNNIYSKDIVSWNSMISGYAQHGLAMQAIDLFE 297
Query: 291 KMMGCEEGFIPDVITVVTVL 310
KM + G PD IT + VL
Sbjct: 298 KM--TKLGVKPDSITFLGVL 315
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%)
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
T + L + +F E S T L D + + +C D+ G H +A G I +
Sbjct: 81 TTSNLLHEYSFVFNEESCSTSLIFDASSLSSAVSSCASSRDLPGGIQFHCLAITSGFISN 140
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
+V ++LI +YGKC ++ KLF MP RN+V+W +II GF++
Sbjct: 141 SYVGSSLITLYGKCGKLDNAHKLFHEMPVRNVVTWTAIISGFAQ 184
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 3/172 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + G H + F + + LI+MY G D+ +F+++ ++
Sbjct: 213 LLSACTGSGALGQGTSAHCQI-IQMGFHSYLHVANALISMYCKSGSVHDAFYIFNNIYSK 271
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+++SG+ ++ L + +F E + +KPD+ TF V+ AC V G
Sbjct: 272 DIVSWNSMISGYAQHGLAMQAIDLF-EKMTKLGVKPDSITFLGVLSACRHAGFVQGGRNY 330
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
+ L + + L+ + G+ +EE + + MP N V W S++
Sbjct: 331 FNSMVEYHLRPQLDHYSCLVDLLGRAGLIEEALDIILRMPILPNAVIWGSLL 382
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + + +G +VH V F ++FI + LIT Y+ C + ++F+ T+
Sbjct: 208 VLSACANAVEFNLGVQVHGHVVKLGCFFHEFI-SVSLITFYANCMKIEHAHKIFNETLTK 266
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ +W AL++ + N + D L +F +++ L P+ TF +KAC G+ + G +
Sbjct: 267 NVVKWTALLTAYVWNNKHQDALRVFGDMTKMGAL-PNQSTFSITLKACCGLEALDKGKEI 325
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H MA K+GL DVFV N+L+ MY +C V V +F + E+++VSWNSII G +++GF
Sbjct: 326 HTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFG 385
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +M+ G P+ IT +L
Sbjct: 386 LWALIFFNQMI--RRGVDPNEITFTGLL 411
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
R+F+ + R++ W +++ G N + L +F ++ + ++P TF CV+ AC
Sbjct: 157 RLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLR-SGVEPTWSTFACVLSACANA 215
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
+ G VHG K+G F+S +LI Y C +E K+F +N+V W +++
Sbjct: 216 VEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALL 275
Query: 274 CGFSEN 279
+ N
Sbjct: 276 TAYVWN 281
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 34/186 (18%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+R +FD + + NL + +++G+T+N+ D L +F +S D ++ +IK C
Sbjct: 31 ARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSV-----RDVVSWNSMIKGCL 85
Query: 212 GIADVGFGS------------------------GVHGMAAKMGL---IGDVFVSNALIAM 244
++G + G +A ++ L + DV NA++
Sbjct: 86 DCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHG 145
Query: 245 YGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVI 304
Y + VEE V+LFE MP R+++SW S+I G NG S E+ + KM+ G P
Sbjct: 146 YFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKML--RSGVEPTWS 203
Query: 305 TVVTVL 310
T VL
Sbjct: 204 TFACVL 209
>gi|255568940|ref|XP_002525440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535253|gb|EEF36930.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 124/233 (53%), Gaps = 6/233 (2%)
Query: 80 LNKALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
+AL+L E L+ + G + AC + + G+++H S + +S D I
Sbjct: 574 FTEALNLFDEMLNRGIQSDNIGFSSAISACAGIQALSQGQQIHAQ-SYISGYSEDLSIGN 632
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L+++Y+ CG ++ F+ + ++ WNAL+SGF ++ + L IF +++ +K
Sbjct: 633 ALVSLYARCGRIQEANLAFEKIDAKDSISWNALMSGFAQSGYCEEALKIFAQMTR-ANIK 691
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
FTF + A +A++ G +H M K G ++ VSNALI +Y KC ++ +
Sbjct: 692 ASLFTFGSAVSAAANMANIKQGKQIHAMIMKTGFDSEIEVSNALITLYAKCGCIDGAKRE 751
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F +PE+N +SWN++I G+S++G E+ +L KM + G P+ +T V V+
Sbjct: 752 FFEIPEKNEISWNAMITGYSQHGCGIEAVNLFQKMK--QVGAKPNHVTFVGVI 802
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 106/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + +IG+++H LV F ++ N L+T+YS G + +++VF +K +
Sbjct: 296 VLSACAKIELFDIGEQLHALVFKCGFFLETYVCNA-LVTLYSRLGNFISAQQVFSKIKCK 354
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ +N+L+SG ++ L +F ++ D LKPD T ++ AC I + G +
Sbjct: 355 DEVSYNSLISGLSQQGCSDRALELFKKMQLD-HLKPDCVTVASLLSACASIKSLSKGEQL 413
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K G+ D+ + +L+ +Y KC+ + K F N+V WN ++ + +
Sbjct: 414 HSYAIKAGMCLDIIIEGSLLDLYVKCSDITTAHKFFATTQTENVVLWNVMLVAYGQLDNL 473
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+SF + +M EG IP+ T ++L
Sbjct: 474 SKSFCIFRQMQ--IEGLIPNQFTYPSIL 499
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 94/191 (49%), Gaps = 2/191 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC K + G+++H + D II L+ +Y C + + F + +T
Sbjct: 397 LLSACASIKSLSKGEQLHSY-AIKAGMCLDIIIEGSLLDLYVKCSDITTAHKFFATTQTE 455
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN ++ + + + + IF ++ + L P+ FT+P +++ C + G +
Sbjct: 456 NVVLWNVMLVAYGQLDNLSKSFCIFRQMQIEG-LIPNQFTYPSILRTCTSFGALDLGEQI 514
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K G +V+V + LI MY K ++ + + E ++VSW ++I G++++
Sbjct: 515 HSQAIKTGFEFNVYVCSVLIDMYAKLGKLDIARGILRRLNEEDVVSWTALIAGYTQHDLF 574
Query: 283 CESFDLLIKMM 293
E+ +L +M+
Sbjct: 575 TEALNLFDEML 585
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 3/172 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI +Y+ GF +R+VFD L ++ W A++S +++N + + +F E+ + L P
Sbjct: 230 LIDLYAKNGFIRSARKVFDELCMKDSVSWVAVISSYSQNGFGEEAIRLFCEMHI-SGLSP 288
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ F V+ AC I G +H + K G + +V NAL+ +Y + ++F
Sbjct: 289 TPYVFSSVLSACAKIELFDIGEQLHALVFKCGFFLETYVCNALVTLYSRLGNFISAQQVF 348
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ VS+NS+I G S+ G S + +L KM + PD +TV ++L
Sbjct: 349 SKIKCKDEVSYNSLISGLSQQGCSDRALELFKKMQ--LDHLKPDCVTVASLL 398
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 109/242 (45%), Gaps = 21/242 (8%)
Query: 52 LSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEK 111
+S + N S +G+ FL + +KS L LL L++A + + H K
Sbjct: 60 ISDQENEESARGIDFLHVVDERGSRAKS-QTYLWLLDFCLNSASFLDCKKL------HSK 112
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
++IG F + ++ +LI Y G +VFD + +R+L WN ++
Sbjct: 113 ILKIG------------FDKESVLCDKLIEFYFAVGDLNSVVKVFDDMPSRSLMTWNKVL 160
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG-GIADVGFGSGVHGMAAKMG 230
SG N+ VL +F ++ + + P+ T V++A G G + +H G
Sbjct: 161 SGLVANKTSNRVLGLFAQMVEEN-VNPNEVTVASVLRAYGSGNVAFYYVEQIHASIISRG 219
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
L N LI +Y K F+ K+F+ + ++ VSW ++I +S+NGF E+ L
Sbjct: 220 LGTSSIACNPLIDLYAKNGFIRSARKVFDELCMKDSVSWVAVISSYSQNGFGEEAIRLFC 279
Query: 291 KM 292
+M
Sbjct: 280 EM 281
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G + A + +I+ GK++H ++ T F ++ ++ LIT+Y+ CG ++R F +
Sbjct: 698 GSAVSAAANMANIKQGKQIHAMI-MKTGFDSEIEVSNALITLYAKCGCIDGAKREFFEIP 756
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG- 219
+N WNA+++G++++ + +++F ++ KP++ TF VI AC + V G
Sbjct: 757 EKNEISWNAMITGYSQHGCGIEAVNLFQKMK-QVGAKPNHVTFVGVISACSHVGLVNEGL 815
Query: 220 SGVHGMAAKMGLI 232
+ M+ + GLI
Sbjct: 816 AYFESMSKEHGLI 828
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K+G + + + LI Y + +VK+F+ MP R+L++WN ++ G N
Sbjct: 109 LHSKILKIGFDKESVLCDKLIEFYFAVGDLNSVVKVFDDMPSRSLMTWNKVLSGLVANKT 168
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S L +M+ EE P+ +TV +VL
Sbjct: 169 SNRVLGLFAQMV--EENVNPNEVTVASVL 195
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 109/208 (52%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C +E G+ VH + S N ++ ++ MY+ CG D+RR+FD + T+
Sbjct: 93 LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK 152
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W AL++GF++N D L +F ++ +P++FT ++KA G + G+ +
Sbjct: 153 DMVTWTALIAGFSQNNRPRDALLLFPQMLR-LGFQPNHFTLSSLLKASGSEHGLDPGTQL 211
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G V+V +AL+ MY +C ++ F+ MP ++ VSWN++I G + G
Sbjct: 212 HAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEG 271
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ LL KM + F P T +VL
Sbjct: 272 EHALHLLWKMQ--RKNFQPTHFTYSSVL 297
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 106/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+A G E ++ G ++H + + + + L+ MY+ CG ++ FD + T+
Sbjct: 195 LLKASGSEHGLDPGTQLHAFC-LKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTK 253
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNAL+SG + L + ++ +P +FT+ V+ AC I + G V
Sbjct: 254 SEVSWNALISGHARKGEGEHALHLLWKMQR-KNFQPTHFTYSSVLSACASIGALEQGKWV 312
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K GL F+ N L+ MY K +++ ++F+ + + ++VSWN+++ G +++G
Sbjct: 313 HAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLG 372
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ D +M+ G P+ I+ + VL
Sbjct: 373 KETLDRFEQMLRI--GIEPNEISFLCVL 398
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 5/180 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E GK VH + S FI NT L+ MY+ G D++RVFD L
Sbjct: 296 VLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNT-LLDMYAKAGSIDDAKRVFDRLVKP 354
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN +++G ++ L + L F ++ ++P+ +F CV+ AC + G
Sbjct: 355 DVVSWNTMLTGCAQHGLGKETLDRFEQMLR-IGIEPNEISFLCVLTACSHSGLLDEGLYY 413
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII--CGFSEN 279
+ K + DV + + G+ ++ + MP E W +++ C +N
Sbjct: 414 FELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKN 473
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 119/216 (55%), Gaps = 6/216 (2%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV 155
KE +L Q D++ + VH ++S ++++ + +L+ Y+ +R+V
Sbjct: 40 KETAFMLGQVLDTYPDLKTLRTVHSRIISEDLRYNSS--LGVKLMRAYASLKDVATARKV 97
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
FD + RN+ N ++ + N Y + + +F + S +KPD++TFPCV+KAC +
Sbjct: 98 FDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCS-CHVKPDHYTFPCVLKACSCSGN 156
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
+ G +HG A K+GL +FV N L++MYGKC F+ E + + M R++VSWNS++ G
Sbjct: 157 IVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAG 216
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+++N ++ ++ +M + D T+ ++LP
Sbjct: 217 YAQNQRFDDALEVCREMESVK--ISHDAGTMASLLP 250
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
+ +F + ++L WN ++ + KN + + + ++ + +D +PD + V+ ACG
Sbjct: 264 KDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADG-FEPDAVSITSVLPACGD 322
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
+ + G +HG + LI ++ + NALI MY KC ++ +FE M R++VSW ++
Sbjct: 323 TSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAM 382
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I + +G C++ L KM + G +PD I VT L
Sbjct: 383 ISAYGFSGRGCDAVALFSKMQ--DSGLVPDSIAFVTTL 418
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 4/173 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG + +GK++H + N ++ LI MY+ CG +R VF+++K+R
Sbjct: 316 VLPACGDTSALSLGKKIHGYIERKKLIPN-LLLENALIDMYAKCGCLDRARDVFENMKSR 374
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W A++S + + D +++F ++ D+ L PD+ F + AC + G
Sbjct: 375 DVVSWTAMISAYGFSGRGCDAVALFSKM-QDSGLVPDSIAFVTTLAACSHAGLLEEGRSC 433
Query: 223 HGMAAKMGLIGDVFVSNA-LIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
+ I A ++ + G+ V+E K + MP E N W +++
Sbjct: 434 FKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALL 486
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 109/208 (52%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C +E G+ VH + S N ++ ++ MY+ CG D+RR+FD + T+
Sbjct: 93 LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK 152
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W AL++GF++N D L +F ++ L+P++FT ++KA G + G+ +
Sbjct: 153 DMVTWTALIAGFSQNNRPRDALLLFPQMLR-LGLQPNHFTLSSLLKASGSEHGLDPGTQL 211
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G V+V +AL+ MY +C ++ F+ MP ++ VSWN++I G + G
Sbjct: 212 HAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEG 271
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ LL KM + F P T +V
Sbjct: 272 EHALHLLWKMQ--RKNFQPTHFTYSSVF 297
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+A G E ++ G ++H + + + + L+ MY+ CG ++ FD + T+
Sbjct: 195 LLKASGSEHGLDPGTQLHAFC-LKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTK 253
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNAL+SG + L + ++ +P +FT+ V AC I + G V
Sbjct: 254 SEVSWNALISGHARKGEGEHALHLLWKMQRKN-FQPTHFTYSSVFSACASIGALEQGKWV 312
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K GL F+ N L+ MY K +++ ++F+ + + ++VSWN+++ G +++G
Sbjct: 313 HAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLG 372
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ D +M+ G P+ I+ + VL
Sbjct: 373 KETLDRFEQMLRI--GIEPNEISFLCVL 398
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 5/180 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ AC +E GK VH + S FI NT L+ MY+ G D++RVFD L
Sbjct: 296 VFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNT-LLDMYAKAGSIDDAKRVFDRLVKP 354
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN +++G ++ L + L F ++ ++P+ +F CV+ AC + G
Sbjct: 355 DVVSWNTMLTGCAQHGLGKETLDRFEQMLR-IGIEPNEISFLCVLTACSHSGLLDEGLYY 413
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII--CGFSEN 279
+ K + DV + + G+ ++ + MP E W +++ C +N
Sbjct: 414 FELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKN 473
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 143/278 (51%), Gaps = 18/278 (6%)
Query: 35 RNKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNA 94
R+ HS R++F + S S++ T N G + QE E+ + + +Q
Sbjct: 365 RDVHSARAMFDKISRPSVT--TWNTLLSG--YCQE-----EQHQDTIELFRRMQHQNVQP 415
Query: 95 DLKEATGVLLQACGHEKDIEIGKRVHELVSASTQF--SNDFIINTRLITMYSLCGFPLDS 152
D + V+L +C ++ G++VH SAS +F ND + + L+ MYS CG +
Sbjct: 416 D-RTTLAVILSSCSKLGILDFGRQVH---SASVRFLLHNDMFVASGLVDMYSKCGQIGIA 471
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
R +F+ + R++ WN+++SG T + L + F ++ + + P ++ +I +C
Sbjct: 472 RSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMR-ENGIMPTESSYASMINSCSR 530
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
++ + G +H K G +V+V +ALI MY KC +++ F+ M +N+V+WN +
Sbjct: 531 LSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEM 590
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I G+++NG ++ +L M+ E+ PD +T + VL
Sbjct: 591 IHGYAQNGLGDKAVELFEYMLTTEQK--PDAVTFIAVL 626
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 12/216 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG + G+R H + +N F+ N L+ MY+ CG D+ R+F +
Sbjct: 147 VLSACGGLAALGDGRRCHGVAVKVGLDANQFVENA-LLGMYTKCGSVGDAVRLFYGMARP 205
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF---- 218
N + A++ G + D L +F + + + D + V+ AC +
Sbjct: 206 NEVSFTAMMGGLAQTGSIDDALRLFARMCR-SGVPVDPVSVSSVLGACAQACATDYSVAR 264
Query: 219 ----GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
G +H + + G D V N+LI MY KC ++E VK+FE +P +VSWN +I
Sbjct: 265 AFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILIT 324
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
GF + G ++ ++L M E GF P+ +T +L
Sbjct: 325 GFGQEGSCAKAVEVLSLMQ--EAGFEPNEVTYSNLL 358
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNEL-YTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
+R + + RN WN ++S ++ + + ++ + ++ L P +FT V+ AC
Sbjct: 93 ARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVEMYGRMRAEG-LLPTHFTLASVLSAC 151
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
GG+A +G G HG+A K+GL + FV NAL+ MY KC V + V+LF M N VS+
Sbjct: 152 GGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFT 211
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+++ G ++ G ++ L +M C G D ++V +VL
Sbjct: 212 AMMGGLAQTGSIDDALRLFARM--CRSGVPVDPVSVSSVL 249
>gi|449523327|ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like, partial [Cucumis sativus]
Length = 1090
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 115/203 (56%), Gaps = 5/203 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ C IE+G+ +H + + N F+ T+L++MY+ CG D+R+VFD ++ R
Sbjct: 86 LLQTCIDVGSIELGRELHVRMGLVHRV-NPFV-ETKLVSMYAKCGCLKDARKVFDGMQER 143
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL+ W+A++ +++ + + +V+ +F + D L PD F FP +++ACG D+ +
Sbjct: 144 NLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVL-PDAFLFPKILQACGNCEDLETVKLI 202
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + + GL + +SN+++ + KC + K F M ER+ VSWN +I G+ + G
Sbjct: 203 HSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVMIAGYCQKGNG 262
Query: 283 CESFDLLIKMMGCEEGFIPDVIT 305
E+ LL M +GF P ++T
Sbjct: 263 DEARRLLDTM--SNQGFKPGLVT 283
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 117/228 (51%), Gaps = 10/228 (4%)
Query: 84 LSLLQENLHNADLKEATG--VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLIT 141
LSL ++ N D ++ V++ + + + +R+ + +S + F + +I
Sbjct: 231 LSLARKFFGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMS-NQGFKPGLVTYNIMIA 289
Query: 142 MYSL---CGFPLDSRRVFDSLK-TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
YS C +D ++ +S+ +++ W +++SGF+++ + L F ++ ++
Sbjct: 290 SYSQLGDCDLVIDLKKKMESVGLAPDVYTWTSMISGFSQSSRISQALDFFKKMIL-AGVE 348
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
P+ T AC + + G +H A KMG+ + V N+LI MY KC +E +
Sbjct: 349 PNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHV 408
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
F+ + E+++ +WNS+I G+ + G+ ++++L +++ E +P+V+T
Sbjct: 409 FDTILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLR--ESTVMPNVVT 454
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 75/149 (50%), Gaps = 3/149 (2%)
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
RN WN+L++G+ + L+IF ++ S P++ T ++ AC +
Sbjct: 486 RNTASWNSLIAGYHQLGEKNKALAIFRQMQS-LNFSPNSVTILSILPACANVMAEKKIKE 544
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG + L ++ V+N+L+ Y K ++ +F M +++++WNSII G+ +G
Sbjct: 545 IHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGC 604
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S +F L +M G P+ T+ +++
Sbjct: 605 SDSAFQLFDQMRNL--GIRPNRGTLASII 631
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 90/211 (42%), Gaps = 44/211 (20%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC K ++ G +H + + + ++ LI MYS CG +R VFD++ ++++
Sbjct: 360 ACASLKSLQNGLEIH-CFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVY 418
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
WN+++ G+ + +F+ L T + P+ T+ +I C D
Sbjct: 419 TWNSMIGGYCQAGYGGKAYELFMRLRESTVM-PNVVTWNAMISGCIQNGDE--------- 468
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE-----RNLVSWNSIICGFSENG 280
++ + LF++M + RN SWNS+I G+ + G
Sbjct: 469 --------------------------DQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQLG 502
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ + +M F P+ +T++++LP
Sbjct: 503 EKNKALAIFRQMQSLN--FSPNSVTILSILP 531
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 103 LLQACGH---EKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
+L AC + EK I K +H V ++ + L+ Y+ G SR VF+ +
Sbjct: 529 ILPACANVMAEKKI---KEIHGCV-LRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGM 584
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
++++ WN++++G+ + +F ++ + ++P+ T +I A G V G
Sbjct: 585 SSKDIITWNSIIAGYILHGCSDSAFQLFDQM-RNLGIRPNRGTLASIIHAYGIAGMVDKG 643
Query: 220 SGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII--CG 275
V + + ++ + A++ +YG+ + + ++ E MP E ++ W S++ C
Sbjct: 644 RHVFSSITEEHQILPTLDHYLAMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLLTACR 703
Query: 276 FSEN 279
F N
Sbjct: 704 FHGN 707
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 97/172 (56%), Gaps = 3/172 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+IT Y G +R+ FD + R+ W A+++G+ ++ Y + L++FVE+ D E
Sbjct: 334 MITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGE-SL 392
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ TF C + C IA + G +HG A KMG FV NAL+AMY KC ++E F
Sbjct: 393 NRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTF 452
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E + E+++VSWN+++ G++ +GF ++ + M G PD IT+V VL
Sbjct: 453 EGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTA--GVKPDEITMVGVL 502
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 82/161 (50%), Gaps = 9/161 (5%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I +I+ Y+ G +RR+FD TR++F W A+VSG+ +N + + + F E+
Sbjct: 234 DAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP 293
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
E+ + V IA F S M + ++ N +I YG+ +
Sbjct: 294 EKNEVSYNAMIAGYVQTKKMDIARELFES----MPCR-----NISSWNTMITGYGQIGDI 344
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ K F++MP+R+ VSW +II G++++G E+ ++ +++
Sbjct: 345 AQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEI 385
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 8/203 (3%)
Query: 76 ESKSLNKALSLLQENLHNAD-LKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
+S +AL++ E + + L AT G L C +E+GK++H + F
Sbjct: 371 QSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCF 430
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
+ N L+ MY CG ++ F+ ++ +++ WN +++G+ ++ L++F + +
Sbjct: 431 VGNA-LLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKT- 488
Query: 194 TELKPDNFTFPCVIKACG--GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+KPD T V+ AC G+ D G + M G+I +I + G+ +
Sbjct: 489 AGVKPDEITMVGVLSACSHTGLLDRGT-EYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRL 547
Query: 252 EEMVKLFEVMP-ERNLVSWNSII 273
EE L MP + SW +++
Sbjct: 548 EEAQDLIRNMPFQPGAASWGALL 570
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 40/129 (31%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+R +FD + R+LF WN +++G+ +N D +F +L P+
Sbjct: 99 ARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLF-------DLMPEK----------- 140
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
DV N+L++ Y + +V+E ++F+ MPE+N +SWN
Sbjct: 141 ----------------------DVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNG 178
Query: 272 IICGFSENG 280
++ + NG
Sbjct: 179 LLAAYVHNG 187
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + L++ Y+ G+ ++R VFD++ +N WN L++ + N + +F E
Sbjct: 141 DVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLF-ESK 199
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
SD +L ++ C++ GG + KM + D N +I+ Y + +
Sbjct: 200 SDWDL----ISWNCLM---GGFVRKKKLGDARWLFDKMP-VRDAISWNTMISGYAQGGGL 251
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
+ +LF+ P R++ +W +++ G+ +NG E+
Sbjct: 252 SQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEA 285
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 73/161 (45%), Gaps = 40/161 (24%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + + I+ + G + VF+++ R+ +NA++SG+ +N + ++F ++
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM- 106
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
P+ D+F N ++ Y + +
Sbjct: 107 ------PER---------------------------------DLFSWNVMLTGYVRNCRL 127
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ +LF++MPE+++VSWNS++ G+++NG+ E+ ++ M
Sbjct: 128 GDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM 168
>gi|255568474|ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535508|gb|EEF37177.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 104/182 (57%), Gaps = 3/182 (1%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLD-SRRVFDSLKTRNLFQWNAL 170
D+++GK VH V T F D + LIT YS C + LD SR+VFD + R++ WN++
Sbjct: 141 DVKLGKEVHGFV-LRTGFDADVFVENALITYYSKC-YDLDLSRKVFDRMTKRDVVSWNSM 198
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
+SG+++ LY D +++ E+ + +P+ T V++ACG D+ FG VH
Sbjct: 199 ISGYSQGGLYEDCKTLYREMVDFSGFRPNGVTVVSVLQACGQTQDLAFGMEVHKFIVDNQ 258
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
+ D+ V NALI +Y KC ++ +LF+ M E++ V++ +II G +G+ +S +L
Sbjct: 259 VEIDISVCNALIGLYAKCGSLDYARELFDEMSEKDEVTYGAIISGLMLHGYVDQSLELFR 318
Query: 291 KM 292
M
Sbjct: 319 GM 320
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 101/178 (56%), Gaps = 5/178 (2%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ ++L+ +YS +R VFD + +N F +NA++ ++ + + D L +F L+S
Sbjct: 61 LASKLVALYSKTNHLAFARYVFDQIPHKNTFSYNAMLISYSLHNRHGDALDLFSSLASSN 120
Query: 195 ELKPDNFTFPCVIKACGG--IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ +N + C++K+ ++DV G VHG + G DVFV NALI Y KC ++
Sbjct: 121 LV--NNISITCLLKSLSSFTLSDVKLGKEVHGFVLRTGFDADVFVENALITYYSKCYDLD 178
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F+ M +R++VSWNS+I G+S+ G E L + M GF P+ +TVV+VL
Sbjct: 179 LSRKVFDRMTKRDVVSWNSMISGYSQGGL-YEDCKTLYREMVDFSGFRPNGVTVVSVL 235
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 110/240 (45%), Gaps = 35/240 (14%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD----- 157
+LQACG +D+ G VH+ + Q D + LI +Y+ CG +R +FD
Sbjct: 234 VLQACGQTQDLAFGMEVHKFI-VDNQVEIDISVCNALIGLYAKCGSLDYARELFDEMSEK 292
Query: 158 --------------------------SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+KT+ L WNA+++G +N + VL + E+
Sbjct: 293 DEVTYGAIISGLMLHGYVDQSLELFRGMKTQILSTWNAVITGLVQNNRHEGVLDLVREMQ 352
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ +P+ T V+ + + G +H A K+G +++V+ A+I MY K ++
Sbjct: 353 A-LGFRPNAVTLSSVLSTIAYFSSLKGGKEIHSYAIKIGYHRNIYVATAIIDMYAKSGYL 411
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++F+ +R+LV W +II ++ +G + + L +M+ ++G PD +T VL
Sbjct: 412 RGAQRVFDQSKDRSLVIWTAIISAYAVHGDANLALGLFHEML--KQGIQPDPVTFTAVLA 469
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 6/165 (3%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK +H + + + + T +I MY+ G+ ++RVFD K R+L W A++S +
Sbjct: 379 GKEIHSY-AIKIGYHRNIYVATAIIDMYAKSGYLRGAQRVFDQSKDRSLVIWTAIISAYA 437
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGSGVHGMAAKMGLIG 233
+ L +F E+ ++PD TF V+ AC G+ D + M K G+
Sbjct: 438 VHGDANLALGLFHEMLKQG-IQPDPVTFTAVLAACAHCGMVDKAW-EIFESMFKKYGIQP 495
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFS 277
V ++ GK + E + MP E + W +++ G S
Sbjct: 496 LVEHYACVVGALGKARRLSEAKEFVSKMPIEPSAKVWGALLHGAS 540
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 97/172 (56%), Gaps = 3/172 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+IT Y G +R+ FD + R+ W A+++G+ ++ Y + L++FVE+ D E
Sbjct: 334 MITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGE-SL 392
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ TF C + C IA + G +HG A KMG FV NAL+AMY KC ++E F
Sbjct: 393 NRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTF 452
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E + E+++VSWN+++ G++ +GF ++ + M G PD IT+V VL
Sbjct: 453 EGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTA--GVKPDEITMVGVL 502
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 82/161 (50%), Gaps = 9/161 (5%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I +I+ Y+ G +RR+FD TR++F W A+VSG+ +N + + + F E+
Sbjct: 234 DAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP 293
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
E+ + V IA F S M + ++ N +I YG+ +
Sbjct: 294 EKNEVSYNAMIAGYVQTKKMDIARELFES----MPCR-----NISSWNTMITGYGQIGDI 344
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ K F++MP+R+ VSW +II G++++G E+ ++ +++
Sbjct: 345 AQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEI 385
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 8/203 (3%)
Query: 76 ESKSLNKALSLLQENLHNAD-LKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
+S +AL++ E + + L AT G L C +E+GK++H + F
Sbjct: 371 QSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCF 430
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
+ N L+ MY CG ++ F+ ++ +++ WN +++G+ ++ L++F + +
Sbjct: 431 VGNA-LLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKT- 488
Query: 194 TELKPDNFTFPCVIKACG--GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+KPD T V+ AC G+ D G + M G+I +I + G+ +
Sbjct: 489 AGVKPDEITMVGVLSACSHTGLLDRG-TEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRL 547
Query: 252 EEMVKLFEVMP-ERNLVSWNSII 273
EE L MP + SW +++
Sbjct: 548 EEAQDLIRNMPFQPGAASWGALL 570
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 40/129 (31%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+R +FD + R+LF WN +++G+ +N D +F +L P+
Sbjct: 99 ARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLF-------DLMPEK----------- 140
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
DV N+L++ Y + +V+E ++F+ MPE+N +SWN
Sbjct: 141 ----------------------DVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNG 178
Query: 272 IICGFSENG 280
++ + NG
Sbjct: 179 LLAAYVHNG 187
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + L++ Y+ G+ ++R VFD++ +N WN L++ + N + +F E
Sbjct: 141 DVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLF-ESK 199
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
SD +L ++ C++ GG + KM + D N +I+ Y + +
Sbjct: 200 SDWDL----ISWNCLM---GGFVRKKKLGDARWLFDKMP-VRDAISWNTMISGYAQGGGL 251
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
+ +LF+ P R++ +W +++ G+ +NG E+
Sbjct: 252 SQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEA 285
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 65/138 (47%), Gaps = 40/138 (28%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VF+++ R+ +NA++SG+ +N + ++F ++ P+
Sbjct: 71 VFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM-------PER-------------- 109
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
D+F N ++ Y + + + +LF++MPE+++VSWNS++
Sbjct: 110 -------------------DLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLS 150
Query: 275 GFSENGFSCESFDLLIKM 292
G+++NG+ E+ ++ M
Sbjct: 151 GYAQNGYVDEAREVFDNM 168
>gi|224087027|ref|XP_002308034.1| predicted protein [Populus trichocarpa]
gi|222854010|gb|EEE91557.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 111/194 (57%), Gaps = 6/194 (3%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V+LQAC D+ +G+++H V S F + + T LI+MYS G ++ +VF+ +
Sbjct: 15 VILQACSDIGDVVLGEQIHGFVIKSG-FEENVFVGTSLISMYSRSGNFDEAEKVFNGVGC 73
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++L N ++ + K + +F+ L S L P+++TF +I C +V G
Sbjct: 74 KDLRCLNCMILEYGKAGYEKRAIGVFIYLIS-VGLDPNDYTFTNIISTC----NVEEGKQ 128
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG+A K G++ V NA+I MYGK VEE ++F VM ++NL+SW ++I G++ NG+
Sbjct: 129 LHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISWTALISGYTRNGY 188
Query: 282 SCESFDLLIKMMGC 295
++ D +++ GC
Sbjct: 189 GEKAVDGFLELRGC 202
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 111/208 (53%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C K++++G ++H LV + D I T LI +Y+ C +R VF+ L R
Sbjct: 214 ILDGCSECKNLDLGTQIHGLV-IKLGYPCDINIGTALIDLYAKCKNFQSARTVFNGLSPR 272
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ +NA++ GF +N+ + +F+ +KPD+ +F ++ A + G G+
Sbjct: 273 STASFNAILVGFIENDSNEEDPMVFLSQLRLAGIKPDSVSFSRLLSLSANRASLVKGRGL 332
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + K G G + VSNALI MY KC VE+ + F M + +SWN+II +S +G
Sbjct: 333 HAYSIKTGFAGHISVSNALITMYAKCGIVEDAYQAFNSMSANDCISWNAIISAYSLHGQG 392
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M E+GF PD IT++ +L
Sbjct: 393 EKALLLYQEME--EKGFTPDEITILVIL 418
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 2/168 (1%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
++E GK++H L + N +ITMY G ++ R+F + +NL W AL+
Sbjct: 122 NVEEGKQLHGLAVKYGVLLQTSVGNA-VITMYGKNGMVEEAARMFSVMNKKNLISWTALI 180
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
SG+T+N + F+EL ++ D+ ++ C ++ G+ +HG+ K+G
Sbjct: 181 SGYTRNGYGEKAVDGFLELRG-CGVECDSGLLATILDGCSECKNLDLGTQIHGLVIKLGY 239
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
D+ + ALI +Y KC + +F + R+ S+N+I+ GF EN
Sbjct: 240 PCDINIGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAILVGFIEN 287
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
K + T +++AC I DV G +HG K G +VFV +LI+MY + +E K
Sbjct: 7 KFNEHTCVVILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGNFDEAEK 66
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F + ++L N +I + + G+ + + I ++ G P+ T ++
Sbjct: 67 VFNGVGCKDLRCLNCMILEYGKAGYEKRAIGVFIYLISV--GLDPNDYTFTNII 118
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 118/211 (55%), Gaps = 7/211 (3%)
Query: 101 GVLLQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
G L+ AC + + GK H L+ + + S+ + T L+ MY CG ++RRVF+
Sbjct: 258 GTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLV--TSLLDMYVKCGDISNARRVFNEH 315
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+L W A++ G+T N + LS+F ++S +KP+ T V+ CG + ++ G
Sbjct: 316 SHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSG-VGIKPNCVTIASVLSGCGLVGNLELG 374
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+HG++ K+G I D V+NAL+ MY KC + +FE+ E+++V+WNSII GFS+N
Sbjct: 375 RSIHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQN 433
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ L +M E +P+ +TV ++
Sbjct: 434 GSIHEALFLFHRMN--TESVMPNGVTVASLF 462
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 110/207 (53%), Gaps = 5/207 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+AC +D++ GK++H + F N ++ T L+ MY+ CG S +VF+ + RN
Sbjct: 161 LKACTEVQDLDNGKKIHCQIVKVPSFDN--VVLTGLLDMYAKCGEIKSSYKVFEDITLRN 218
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W ++++G+ KN+LY + L +F + ++ L + +T+ ++ AC + + G H
Sbjct: 219 VVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVL-GNEYTYGTLVMACTKLRALHQGKWFH 277
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G K G+ + +L+ MY KC + ++F +LV W ++I G++ NG
Sbjct: 278 GCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVN 337
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L KM G G P+ +T+ +VL
Sbjct: 338 EALSLFQKMSGV--GIKPNCVTIASVL 362
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 125/237 (52%), Gaps = 11/237 (4%)
Query: 79 SLNKALSLLQENLHNADLKE---ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
S+N+ALSL Q+ + +K +L CG ++E+G+ +H L S + +
Sbjct: 335 SVNEALSLFQK-MSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGL-SIKVGIWDTNVA 392
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
N L+ MY+ C D++ VF+ +++ WN+++SGF++N + L +F +++++
Sbjct: 393 NA-LVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESV 451
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD--VFVSNALIAMYGKCAFVEE 253
+ P+ T + AC + + GS +H + K+G + V V AL+ Y KC E
Sbjct: 452 M-PNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAES 510
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ + E+N ++W+++I G+ + G + S +L +M+ ++ P+ T +VL
Sbjct: 511 ARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQK--PNESTFTSVL 565
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 93/191 (48%), Gaps = 6/191 (3%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+LL C +I+ ++ H +++ + D I T+L+++Y G+ D+R VFD +
Sbjct: 61 LLLSKC---TNIDSLRQAHGVLTGNG-LMGDISIATKLVSLYGSFGYTKDARLVFDQIPE 116
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+ + W ++ + N +V+ F +L D+ F +KAC + D+ G
Sbjct: 117 PDFYLWKVILRCYCLNNESFEVIK-FYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKK 175
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K+ +V ++ L+ MY KC ++ K+FE + RN+V W S+I G+ +N
Sbjct: 176 IHCQIVKVPSFDNVVLT-GLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDL 234
Query: 282 SCESFDLLIKM 292
E L +M
Sbjct: 235 YEEGLVLFNRM 245
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 2/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ CG D +GK+VH F D + T L+ MY D RVFD ++ +
Sbjct: 98 VLKVCGCLFDRIVGKQVH-CQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVK 156
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W +L++G+ +N L L +F ++ + +KP+ FTF V+ V G V
Sbjct: 157 NVVSWTSLLAGYRQNGLNEQALKLFSQMQLEG-IKPNPFTFAAVLGGLAADGAVEKGVQV 215
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H M K GL +FV N+++ MY K V + +F+ M RN VSWNS+I GF NG
Sbjct: 216 HTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLD 275
Query: 283 CESFDLLIKM 292
E+F+L +M
Sbjct: 276 LEAFELFYRM 285
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 106/199 (53%), Gaps = 5/199 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E G +VH +V S S F+ N+ ++ MYS D++ VFDS++ RN WN++++
Sbjct: 209 VEKGVQVHTMVIKSGLDSTIFVGNS-MVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIA 267
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
GF N L + +F + + +K F VIK C I ++ F +H K G
Sbjct: 268 GFVTNGLDLEAFELFYRMRLEG-VKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSD 326
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPE-RNLVSWNSIICGFSENGFSCESFDLLIK 291
D+ + AL+ Y KC+ +++ KLF +M +N+VSW +II G+ +NG + + +L +
Sbjct: 327 FDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQ 386
Query: 292 MMGCEEGFIPDVITVVTVL 310
M EG P+ T T+L
Sbjct: 387 MR--REGVRPNHFTYSTIL 403
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 97/176 (55%), Gaps = 3/176 (1%)
Query: 118 RVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKN 177
++H LV T + N + T L YS G ++ ++F+ + +++ W+A++SG+ +
Sbjct: 413 QIHALV-VKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQM 471
Query: 178 ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG-IADVGFGSGVHGMAAKMGLIGDVF 236
+ IF++L+ + ++P+ FTF V+ AC A V G H + K G +
Sbjct: 472 GDIEGAVKIFLQLAKEG-VEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALC 530
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
VS+AL+ MY K +E ++F+ +R+LVSWNS+I G++++G +S + +M
Sbjct: 531 VSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEM 586
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 110/212 (51%), Gaps = 11/212 (5%)
Query: 101 GVLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
+++ C + K++ K++H +++ + F D I T L+ YS C D+ ++F +
Sbjct: 298 ATVIKLCANIKEMSFAKQLHCQVIKNGSDF--DLNIKTALMVAYSKCSEIDDAFKLFCMM 355
Query: 160 K-TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+N+ W A++SG+ +N +++F ++ + ++P++FT+ ++ A ++
Sbjct: 356 HGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREG-VRPNHFTYSTILTANAAVSP--- 411
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
S +H + K V AL Y K E K+FE++ E+++V+W++++ G+++
Sbjct: 412 -SQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQ 470
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + + +++ +EG P+ T +VL
Sbjct: 471 MGDIEGAVKIFLQL--AKEGVEPNEFTFSSVL 500
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 4/162 (2%)
Query: 103 LLQACGH-EKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L AC +E GK+ H S + FSN +++ L+TMY+ G + VF
Sbjct: 499 VLNACAAPTASVEQGKQFHS-CSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVD 557
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R+L WN+++SG+ ++ L IF E+ S L+ D TF VI AC V G
Sbjct: 558 RDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKN-LELDGITFIGVISACTHAGLVNEGQR 616
Query: 222 VHGMAAK-MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ K ++ + + ++ +Y + +E+ + L MP
Sbjct: 617 YFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMP 658
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 111/207 (53%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ AC K + G ++H V S +S D I L+ +Y+ CG ++ F++++ +
Sbjct: 453 ISACAGIKAVHQGSQIHARVYVSG-YSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKE 511
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WN L+SGF ++ LY + L +F+++ K + FTF I A +AD+ G +H
Sbjct: 512 GITWNGLISGFAQSGLYEEALKVFMKMDQ-AGAKYNVFTFVSSISASANLADIKQGKQIH 570
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
K G + +SNALI++YGKC +E+ F M +RN VSWN+II S++G
Sbjct: 571 ARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGL 630
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL +M ++G P +T V VL
Sbjct: 631 EALDLFDQMK--QQGLKPSDVTFVGVL 655
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 102/190 (53%), Gaps = 2/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C H +I +G+++H L + F +D ++ LI MYS G+ ++R+ D ++ +
Sbjct: 351 MLRTCTHTGEIGLGEQIHSL-TIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEK 409
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W ++++G+ ++E + L F E+ + + PDN I AC GI V GS +
Sbjct: 410 DVVSWTSMIAGYVQHEFCKEALETFKEMQA-CGIWPDNIGLASAISACAGIKAVHQGSQI 468
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G DV + N L+ +Y +C +E FE + + ++WN +I GF+++G
Sbjct: 469 HARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLY 528
Query: 283 CESFDLLIKM 292
E+ + +KM
Sbjct: 529 EEALKVFMKM 538
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 111/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC D+ GK++H + S D+I+ L+ +Y G ++ ++FDS
Sbjct: 250 LLAACSAVGDLRKGKQLHSYL-LKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRT 308
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN ++ + + + IF + + ++P+ FT+PC+++ C ++G G +
Sbjct: 309 NVVLWNLMLVAYGQIDDLAKSFDIFYRMLA-AGVRPNKFTYPCMLRTCTHTGEIGLGEQI 367
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + K G D++VS LI MY K ++++ ++ +++ E+++VSW S+I G+ ++ F
Sbjct: 368 HSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFC 427
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + +M C G PD I + + +
Sbjct: 428 KEALETFKEMQAC--GIWPDNIGLASAI 453
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 88/177 (49%), Gaps = 3/177 (1%)
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
II LI +Y+ GF +RRVF+ L R+ W A++SG+ +N L + + ++ E+
Sbjct: 78 IIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHR- 136
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+ + P + ++ AC G +H K G + FV NALI++Y +C
Sbjct: 137 SGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRL 196
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F M + V++N++I G ++ G + + +M G PD +T+ ++L
Sbjct: 197 ADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQ--LSGLSPDSVTIASLL 251
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + ++G+ +H V FS F+ N LI++Y C + RVF +
Sbjct: 149 ILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNA-LISLYLRCRSFRLADRVFCDMLYC 207
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ +N L+SG + L IF E+ + L PD+ T ++ AC + D+ G +
Sbjct: 208 DSVTFNTLISGHAQCGHGDRALGIFDEMQL-SGLSPDSVTIASLLAACSAVGDLRKGKQL 266
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G+ D + +L+ +Y K +EE +++F+ N+V WN ++ + +
Sbjct: 267 HSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDL 326
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+SFD+ +M+ G P+ T +L
Sbjct: 327 AKSFDIFYRMLAA--GVRPNKFTYPCML 352
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 203 FPCVIKACGGIADVG-FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
F C ++AC G +H A GL G + N LI +Y K FV ++FE +
Sbjct: 44 FACALRACRGSGRRWPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEEL 103
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
R+ VSW +++ G+++NG E+ L +M G +P + ++L
Sbjct: 104 SVRDNVSWVAVLSGYAQNGLGEEAVRLYREMH--RSGVVPTPYVLSSIL 150
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 14/175 (8%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ A + DI+ GK++H V T ++++ I+ LI++Y CG D++ F + RN
Sbjct: 554 ISASANLADIKQGKQIHARV-IKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRN 612
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG---- 219
WN +++ +++ + L +F ++ LKP + TF V+ AC + V G
Sbjct: 613 EVSWNTIITCCSQHGRGLEALDLFDQMKQQG-LKPSDVTFVGVLTACSHVGLVEEGLCYF 671
Query: 220 ------SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS 268
G+H + D+ + + FVEEM + M R L+S
Sbjct: 672 KSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKR--FVEEMPIPADSMVWRTLLS 724
>gi|302809912|ref|XP_002986648.1| hypothetical protein SELMODRAFT_41458 [Selaginella moellendorffii]
gi|300145536|gb|EFJ12211.1| hypothetical protein SELMODRAFT_41458 [Selaginella moellendorffii]
Length = 623
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 109/210 (51%), Gaps = 7/210 (3%)
Query: 103 LLQACGHEKDIEIGKRVHE--LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
LLQAC K + G+R+H L S S+ S+ ++ LI MY CG ++R VF S++
Sbjct: 8 LLQACARLKALAQGQRIHAHILSSHSSSGSSSTLVLNHLINMYGKCGRVEEARAVFASME 67
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
NL WN +++ L++F + + + PD +F V ACG +
Sbjct: 68 HPNLVSWNTIIAAHAAGGDGRGALAVFRAMQLEASVVPDRVSFTSVANACGSAREARI-- 125
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H A G + DV + +LI MY KC +E+ +F+ M ERN VSWN+++ G+S++G
Sbjct: 126 -IHASVAARGFLDDVIIGTSLITMYAKCGSIEDARLVFDSMAERNEVSWNAMLSGYSQHG 184
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L M+ + G P+ +T++ V+
Sbjct: 185 HGAQLLHLFRAML--QGGVQPNAVTLLPVV 212
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 107/215 (49%), Gaps = 12/215 (5%)
Query: 104 LQACGHEKDIEIGKRVHELV------SASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
L AC + +E G+ +H + + + + ++ L +MY+ CG ++ VF
Sbjct: 307 LNACDKAEMVEHGRSIHGRIVLQSRDTPALSLRTNAVVGCSLCSMYARCGSIDEAAAVFA 366
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
++ RN+ WNA++ + ++ L++F + +KPD T V+ AC G D
Sbjct: 367 GMEQRNVVSWNAMIGAYAQHGRARLALAVFGGMQQHG-VKPDAITLISVLDACAGAGDAR 425
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM--PERNLVSWNSIICG 275
GS VHG + ++ L + NA + MY K V ++FE M R ++SW++++
Sbjct: 426 RGSQVHGWSLQLQLR-SAALDNAAVNMYAKSGRVAAAREVFEAMDAQRRTIMSWSAMVAA 484
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ G + E+F L M EG P+ +T++++L
Sbjct: 485 YAGVGHAEEAFRLFHAMQ--REGVRPNHVTLISIL 517
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 11/187 (5%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSL-KTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
+ + I M++ G + +F S+ R++ WN +++G+ N D + +
Sbjct: 232 EVAVRNACINMHAKRGDVDRAAAIFASMVAARDVISWNVMMAGYA-NAGRGDEAVVLLRQ 290
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM-------AAKMGLIGDVFVSNALIA 243
PD T+ + AC V G +HG + L + V +L +
Sbjct: 291 MEQHGFHPDRVTYVNFLNACDKAEMVEHGRSIHGRIVLQSRDTPALSLRTNAVVGCSLCS 350
Query: 244 MYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
MY +C ++E +F M +RN+VSWN++I ++++G + + + M + G PD
Sbjct: 351 MYARCGSIDEAAAVFAGMEQRNVVSWNAMIGAYAQHGRARLALAVFGGMQ--QHGVKPDA 408
Query: 304 ITVVTVL 310
IT+++VL
Sbjct: 409 ITLISVL 415
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++ACG ++ + VH+ + S F D + LI +Y+ G+ D+RRVFD L R
Sbjct: 118 VIKACGGLNNVPLCMVVHD-TARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLR 176
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN ++ G+ K+ + + + F E+ + + ++ T+ C++ C + G+ +
Sbjct: 177 DTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMV-NSVTYTCILSICATRGNFCAGTQL 235
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ G D V+N L+AMY KC + KLF MP+ + V+WN +I G+ +NGF+
Sbjct: 236 HGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFT 295
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ L M+ G PD +T + LP
Sbjct: 296 DEAAPLFNAMI--SAGVKPDSVTFASFLP 322
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 92/178 (51%), Gaps = 2/178 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L +AC ++ ++VH V + ++R++ +Y LCG D+ +F L+ R
Sbjct: 17 LFRACSDASMVQQARQVHTQVIVGG-MGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELR 75
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
WN ++ G + L + ++ + + PD +TFP VIKACGG+ +V V
Sbjct: 76 YALPWNWMIRGLYMLGWFDFALLFYFKMLG-SNVSPDKYTFPYVIKACGGLNNVPLCMVV 134
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H A +G D+F +ALI +Y ++ + ++F+ +P R+ + WN ++ G+ ++G
Sbjct: 135 HDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSG 192
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 122/270 (45%), Gaps = 14/270 (5%)
Query: 41 RSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEAT 100
R IF++ + ++ T S LH L ++N L+QE + L A+
Sbjct: 369 RKIFQQNILVDVAVCTAMISGYVLHGLN--------IDAINTFRWLIQEGMVTNSLTMAS 420
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L AC ++ GK +H + + N + + + MY+ CG + F +
Sbjct: 421 --VLPACAAVAALKPGKELHCHI-LKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMS 477
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R+ WN+++S F++N + +F ++ + K D+ + + A + + +G
Sbjct: 478 DRDSVCWNSMISSFSQNGKPEIAIDLFRQMGM-SGAKFDSVSLSSALSAAANLPALYYGK 536
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG + D FV++ LI MY KC + +F +M +N VSWNSII + +G
Sbjct: 537 EMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHG 596
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E DL +M+ G PD +T + ++
Sbjct: 597 CPRECLDLYHEML--RAGIHPDHVTFLVII 624
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 103/209 (49%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C + G ++H LV S F D + L+ MYS CG L +R++F+++
Sbjct: 219 ILSICATRGNFCAGTQLHGLVIGSG-FEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQT 277
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN L++G+ +N + +F + S +KPD+ TF + + + V
Sbjct: 278 DTVTWNGLIAGYVQNGFTDEAAPLFNAMIS-AGVKPDSVTFASFLPSILESGSLRHCKEV 336
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + + DV++ +ALI +Y K VE K+F+ ++ ++I G+ +G +
Sbjct: 337 HSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLN 396
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ + ++ +EG + + +T+ +VLP
Sbjct: 397 IDAINTFRWLI--QEGMVTNSLTMASVLP 423
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK +H V FS+D + + LI MYS CG + VF+ + +N WN++++ +
Sbjct: 535 GKEMHGYV-IRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYG 593
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGSGVHGMAAKMGLIG 233
+ + L ++ E+ + PD+ TF +I ACG G+ D G H M + G+
Sbjct: 594 NHGCPRECLDLYHEMLR-AGIHPDHVTFLVIISACGHAGLVDEGIHY-FHCMTREYGIGA 651
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ ++ +YG+ V E + MP
Sbjct: 652 RMEHYACMVDLYGRAGRVHEAFDTIKSMP 680
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 2/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ CG D +GK+VH F D + T L+ MY D RVFD ++ +
Sbjct: 98 VLKVCGCLFDRIVGKQVH-CQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVK 156
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W +L++G+ +N L L +F ++ + +KP+ FTF V+ V G V
Sbjct: 157 NVVSWTSLLAGYRQNGLNEQALKLFSQMQLEG-IKPNPFTFAAVLGGLAADGAVEKGVQV 215
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H M K GL +FV N+++ MY K V + +F+ M RN VSWNS+I GF NG
Sbjct: 216 HTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLD 275
Query: 283 CESFDLLIKM 292
E+F+L +M
Sbjct: 276 LEAFELFYRM 285
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 107/199 (53%), Gaps = 4/199 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E G +VH +V S S F+ N+ ++ MYS D++ VFDS++ RN WN++++
Sbjct: 209 VEKGVQVHTMVIKSGLDSTIFVGNS-MVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIA 267
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
GF N L + +F + + +K F VIK C I ++ F +H K G
Sbjct: 268 GFVTNGLDLEAFELFYRMRLEG-VKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSD 326
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPE-RNLVSWNSIICGFSENGFSCESFDLLIK 291
D+ + AL+ Y KC+ +++ KLF +M +N+VSW +II G+ +NG + + +L +
Sbjct: 327 FDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQ 386
Query: 292 MMGCEEGFIPDVITVVTVL 310
M EEG P+ T +VL
Sbjct: 387 MRR-EEGVEPNEFTFSSVL 404
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 106/195 (54%), Gaps = 5/195 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
+++ C + K++ K++H +++ + F D I T L+ YS C D+ ++F +
Sbjct: 298 ATVIKLCANIKEMSFAKQLHCQVIKNGSDF--DLNIKTALMVAYSKCSEIDDAFKLFCMM 355
Query: 160 K-TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG-IADVG 217
+N+ W A++SG+ +N +++F ++ + ++P+ FTF V+ AC A V
Sbjct: 356 HGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVE 415
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G H + K G + VS+AL+ MY K +E ++F+ +R+LVSWNS+I G++
Sbjct: 416 QGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYA 475
Query: 278 ENGFSCESFDLLIKM 292
++G +S + +M
Sbjct: 476 QHGCGKKSLKIFEEM 490
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 4/162 (2%)
Query: 103 LLQACGH-EKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L AC +E GK+ H S + FSN +++ L+TMY+ G + VF
Sbjct: 403 VLNACAAPTASVEQGKQFHS-CSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVD 461
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R+L WN+++SG+ ++ L IF E+ S L+ D TF VI AC V G
Sbjct: 462 RDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKN-LELDGITFIGVISACTHAGLVNEGQR 520
Query: 222 VHGMAAK-MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ K ++ + + ++ +Y + +E+ + L MP
Sbjct: 521 YFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMP 562
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 125/238 (52%), Gaps = 8/238 (3%)
Query: 76 ESKSLNKALSLLQENLHNADL---KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSND 132
+ ++ AL LL E + A++ K +LQ C +E GK+VH + S
Sbjct: 275 QQGQVDVALELL-EKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREI 333
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
+++N LITMY CG ++R++F L R++ W A+V+G+ + + + + +F +
Sbjct: 334 WVVNA-LITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQ 392
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+KPD TF + +C A + G +H G DV++ +AL++MY KC ++
Sbjct: 393 QG-IKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMD 451
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +F M ERN+V+W ++I G +++G E+ + +M ++G PD +T +VL
Sbjct: 452 DARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMK--KQGIKPDKVTFTSVL 507
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 125/249 (50%), Gaps = 17/249 (6%)
Query: 69 EITTLCEESKSLNKALSLLQENLHNADLKEATGV-------LLQACGHEKDIEIGKRVHE 121
+++ LC++ + L +AL +L N + + T V LLQ C + +E G+ VH
Sbjct: 67 DVSILCKQGR-LKEALGIL-----NTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHA 120
Query: 122 LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYT 181
+ S N ++ NT L++MY+ CG D+RRVFD ++ RN+ W A++ F
Sbjct: 121 AILKSGIQPNRYLENT-LLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNL 179
Query: 182 DVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNAL 241
+ + E KPD TF ++ A + G VH AK GL + V +L
Sbjct: 180 EAYKCY-ETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSL 238
Query: 242 IAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIP 301
+ MY KC + + +F+ +PE+N+V+W +I G+++ G + +LL KM E P
Sbjct: 239 VGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAE--VAP 296
Query: 302 DVITVVTVL 310
+ IT ++L
Sbjct: 297 NKITYTSIL 305
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 113/209 (54%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL A + + +++G++VH E+ A + + T L+ MY+ CG ++ +FD L
Sbjct: 203 LLNAFTNPELLQVGQKVHMEIAKAGLELEPR--VGTSLVGMYAKCGDISKAQVIFDKLPE 260
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N+ W L++G+ + + DV +E E+ P+ T+ +++ C + G
Sbjct: 261 KNVVTWTLLIAGYAQ-QGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKK 319
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH + G +++V NALI MY KC ++E KLF +P R++V+W +++ G+++ GF
Sbjct: 320 VHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGF 379
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL +M ++G PD +T + L
Sbjct: 380 HDEAIDLFRRMQ--QQGIKPDKMTFTSAL 406
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 104 LQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L +C ++ GK +H+ LV A +S D + + L++MY+ CG D+R VF+ + R
Sbjct: 406 LTSCSSPAFLQEGKSIHQQLVHAG--YSLDVYLQSALVSMYAKCGSMDDARLVFNQMSER 463
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG- 221
N+ W A+++G ++ + L F ++ +KPD TF V+ AC + V G
Sbjct: 464 NVVAWTAMITGCAQHGRCREALEYFEQMKKQG-IKPDKVTFTSVLSACTHVGLVEEGRKH 522
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
M G+ V + + + G+ +EE + MP
Sbjct: 523 FRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMP 563
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 118/215 (54%), Gaps = 7/215 (3%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
+ +LL+ C K++ +++ LV + + F T+L++++ G ++ RVF
Sbjct: 37 EHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFF-QTKLVSLFCRYGSVDEAARVF 92
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
+ + ++ ++ ++ GF K L FV + D +++P + F ++K CG A++
Sbjct: 93 EPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD-DVEPVVYNFTYLLKVCGDEAEL 151
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G +HG+ K G D+F L MY KC V E K+F+ MPER+LVSWN+I+ G+
Sbjct: 152 RVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGY 211
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
S+NG + + +++ M CEE P IT+V+VLP
Sbjct: 212 SQNGMARMALEMVKSM--CEENLKPSFITIVSVLP 244
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 116/208 (55%), Gaps = 6/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC D+E G+ +H+L N ++N+ LI+MY C + +F L++R
Sbjct: 344 LHACADLGDLERGRFIHKLSVELGLDRNVSVVNS-LISMYCKCKEVDTAASMFGKLQSRT 402
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L WNA++ GF +N D L+ F ++ S T +KPD FT+ VI A ++ +H
Sbjct: 403 LVSWNAMILGFAQNGRPIDALNYFSQMRSRT-VKPDTFTYVSVITAIAELSITHHAKWIH 461
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G+ + L +VFV+ AL+ MY KC + +F++M ER++ +WN++I G+ +GF
Sbjct: 462 GVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGK 521
Query: 284 ESFDLLIKMMGCEEGFI-PDVITVVTVL 310
+ +L +M ++G I P+ +T ++V+
Sbjct: 522 AALELFEEM---QKGTIKPNGVTFLSVI 546
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 124/232 (53%), Gaps = 6/232 (2%)
Query: 79 SLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
+L S+ +ENL + + + +L A + I +GK +H S F + I+T
Sbjct: 220 ALEMVKSMCEENLKPSFITIVS--VLPAVSALRLISVGKEIHGYAMRSG-FDSLVNISTA 276
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+ MY+ CG +R++FD + RN+ WN+++ + +NE + + IF ++ D +KP
Sbjct: 277 LVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML-DEGVKP 335
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ + + AC + D+ G +H ++ ++GL +V V N+LI+MY KC V+ +F
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF 395
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ R LVSWN++I GF++NG ++ + +M PD T V+V+
Sbjct: 396 GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS--RTVKPDTFTYVSVI 445
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
K +H +V S N F+ T L+ MY+ CG + +R +FD + R++ WNA++ G+
Sbjct: 457 AKWIHGVVMRSCLDKNVFV-TTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 515
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGF 218
+ L +F E+ T +KP+ TF VI AC G+ + G
Sbjct: 516 THGFGKAALELFEEMQKGT-IKPNGVTFLSVISACSHSGLVEAGL 559
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 111/208 (53%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC ++ G+ VH + + + ++ L+ MY+ CG ++ VF + +
Sbjct: 761 VLHACACGNSLDKGRDVHNYIRKN-NMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVK 819
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN ++ G++KN L + L +F E+ ++ +PD T C++ ACG +A + G G+
Sbjct: 820 DIVSWNTMIGGYSKNSLPNEALKLFAEMQKES--RPDGITMACLLPACGSLAALEIGRGI 877
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + G ++ V+NALI MY KC + LF+++PE++L++W +I G +G
Sbjct: 878 HGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLG 937
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ KM G PD IT ++L
Sbjct: 938 NEAIATFQKMR--IAGIKPDEITFTSIL 963
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 112/209 (53%), Gaps = 7/209 (3%)
Query: 104 LQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ AC + + +G+ +H + V A FS + + N L+ MYS CG D+ + F+ + +
Sbjct: 661 VAACANVGSLSLGRALHGQGVKAC--FSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQK 718
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W +L++ + + LY D + +F E+ S + PD ++ V+ AC + G V
Sbjct: 719 TVVSWTSLIAAYVREGLYDDAIRLFYEMESKG-VSPDVYSMTSVLHACACGNSLDKGRDV 777
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K + + VSNAL+ MY KC +EE +F +P +++VSWN++I G+S+N
Sbjct: 778 HNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLP 837
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ L +M ++ PD IT+ +LP
Sbjct: 838 NEALKLFAEM---QKESRPDGITMACLLP 863
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 122/230 (53%), Gaps = 5/230 (2%)
Query: 67 LQEITTLCE--ESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVS 124
L E T +C+ E L A+ LL+ + + A +LQ C K ++ GK VH ++S
Sbjct: 419 LDENTKICKFCEVGDLRNAVELLRMSQKSELDLNAYSSILQLCAEHKCLQEGKMVHSVIS 478
Query: 125 ASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN-LFQWNALVSGFTKNELYTDV 183
S + ++ +L+ MY CG + RR+FD + + N +F WN ++S + K Y +
Sbjct: 479 -SNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRES 537
Query: 184 LSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIA 243
+ +F ++ + +++TF C++K + VG +HG K+G V N+LIA
Sbjct: 538 IYLFKKMQK-LGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIA 596
Query: 244 MYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
Y K V+ KLF+ + +R++VSWNS+I G NGFS + + ++M+
Sbjct: 597 TYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQML 646
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 4/194 (2%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
KR+H V S + ++N+ LI Y G + ++FD L R++ WN+++SG
Sbjct: 573 KRIHGCVYKLGFGSYNTVVNS-LIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVM 631
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF 236
N L FV++ + D T + AC + + G +HG K +V
Sbjct: 632 NGFSHSALEFFVQMLI-LRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVM 690
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCE 296
+N L+ MY KC + + ++ FE M ++ +VSW S+I + G ++ L +M
Sbjct: 691 FNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEME--S 748
Query: 297 EGFIPDVITVVTVL 310
+G PDV ++ +VL
Sbjct: 749 KGVSPDVYSMTSVL 762
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 7/199 (3%)
Query: 81 NKALSLLQENLHNADLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
N+AL L E + T LL ACG +EIG+ +H + +S++ + L
Sbjct: 838 NEALKLFAEMQKESRPDGITMACLLPACGSLAALEIGRGIHGCI-LRNGYSSELHVANAL 896
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
I MY CG + +R +FD + ++L W ++SG + L + ++ F ++ +KPD
Sbjct: 897 IDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRI-AGIKPD 955
Query: 200 NFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
TF ++ AC G+ + G+G + M ++ + + ++ + + + + L
Sbjct: 956 EITFTSILYACSHSGLLNEGWGF-FNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNL 1014
Query: 258 FEVMPER-NLVSWNSIICG 275
E MP + + W +++CG
Sbjct: 1015 IETMPIKPDATIWGALLCG 1033
>gi|302790562|ref|XP_002977048.1| hypothetical protein SELMODRAFT_106624 [Selaginella moellendorffii]
gi|300155024|gb|EFJ21657.1| hypothetical protein SELMODRAFT_106624 [Selaginella moellendorffii]
Length = 883
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 128/233 (54%), Gaps = 11/233 (4%)
Query: 81 NKALSLLQENLHNADLKEATGVL---LQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
KA+ + + ++ +A +K + L L AC +D+E G+R+H +S S +F + ++ T
Sbjct: 128 RKAIEMFR-SMDSAGIKPDSATLSSVLGACSSLRDLEEGRRIHGRIS-SGEFQSGIVVET 185
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L+ MY+ CG ++R VFD ++ +++ WN++++ + + + E+ +K
Sbjct: 186 GLVKMYARCGRLREAREVFDRIENKDVICWNSMIAAYAQGGHSAQARQLCEEMEG-FGVK 244
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
+ TF ++ AC + + G +H A GL + V NALI+MYGKC ++ ++
Sbjct: 245 ASDTTFAGILGACSSLEE---GKKIHSRALARGLSSSIIVQNALISMYGKCNELDAARRV 301
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F + ++VSW ++I ++++G + E+ +L +M G EG PD +T +VL
Sbjct: 302 FSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEG--EGMEPDKVTFTSVL 352
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 113/217 (52%), Gaps = 8/217 (3%)
Query: 84 LSLLQENLHNAD------LKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
L+ L ++LH+ +++ LL+ CG+ + G+R+H + AS S+ F+
Sbjct: 26 LARLDDDLHHLQFQSPFQVRQTYAALLKHCGNAAALPQGRRIHAHIVASGLASDGFL-GD 84
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L+ MY CG D+ +VF +L R+LF WN +++ F KN + +F + S +K
Sbjct: 85 HLLQMYGKCGSVDDAIQVFHALPRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDS-AGIK 143
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
PD+ T V+ AC + D+ G +HG + + V L+ MY +C + E ++
Sbjct: 144 PDSATLSSVLGACSSLRDLEEGRRIHGRISSGEFQSGIVVETGLVKMYARCGRLREAREV 203
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
F+ + ++++ WNS+I +++ G S ++ L +M G
Sbjct: 204 FDRIENKDVICWNSMIAAYAQGGHSAQARQLCEEMEG 240
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 108/211 (51%), Gaps = 11/211 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E GK++H A S+ I+ LI+MY C +RRVF ++
Sbjct: 253 ILGAC---SSLEEGKKIHSRALARG-LSSSIIVQNALISMYGKCNELDAARRVFSKVRAH 308
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W AL+ +T++ + L ++ ++ + ++PD TF V+ AC D+ G +
Sbjct: 309 DVVSWTALIVAYTQHGRNREALELYKQMEGEG-MEPDKVTFTSVLSACSNTNDLELGQAL 367
Query: 223 HG--MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE-RNLVSWNSIICGFSEN 279
H +A K G V V+ ALI MY KC ++ ++F+ + + +V WN++I + +
Sbjct: 368 HARLLARKDGFSDGVLVA-ALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQE 426
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G+S + DL M + G PD T+ ++L
Sbjct: 427 GYSRAAVDLYDMMK--QRGLDPDESTLSSIL 455
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 5/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-T 161
+L AC + D+E+G+ +H + A +D ++ LI MY CG S +F S K T
Sbjct: 351 VLSACSNTNDLELGQALHARLLARKDGFSDGVLVAALINMYVKCGRLDLSSEIFQSCKDT 410
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+ + WNA+++ + + E Y+ ++ L PD T ++ AC + D+ G
Sbjct: 411 KAVVVWNAMITAY-EQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACAELKDLEKGEQ 469
Query: 222 VH-GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH + A + V NALI+MY C + E +F+ M R++VSW +I + + G
Sbjct: 470 VHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRMKNRDVVSWTILISAYVQGG 529
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + L +M+ EG P +T++ V+
Sbjct: 530 DARRALRLYRRML--VEGVQPTEVTMLAVI 557
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 16/198 (8%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC KD+E G++VH + AS S + ++ LI+MY+ CG +++ VF +K R
Sbjct: 454 ILSACAELKDLEKGEQVHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRMKNR 513
Query: 163 NLFQWNALVSGFTKN----ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
++ W L+S + + + VE ++P T VI AC + +
Sbjct: 514 DVVSWTILISAYVQGGDARRALRLYRRMLVE-----GVQPTEVTMLAVIAACSAMESLWE 568
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS----WNSIIC 274
G +H + M D V ALI+MY +C ++ ++F + R+L S WN+++
Sbjct: 569 GIVIHALTDSM-FFTDTAVQAALISMYARCRRLDLACQVFRQV--RHLESSANCWNAMLA 625
Query: 275 GFSENGFSCESFDLLIKM 292
+S+ G E L +M
Sbjct: 626 AYSQLGLPEEGIRLYWEM 643
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 104/204 (50%), Gaps = 13/204 (6%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++ AC + + G +H L + F D + LI+MY+ C + +VF +
Sbjct: 555 AVIAACSAMESLWEGIVIHALTD--SMFFTDTAVQAALISMYARCRRLDLACQVFR--QV 610
Query: 162 RNLFQ----WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
R+L WNA+++ +++ L + + ++ E+SS T +K + TF + AC + V
Sbjct: 611 RHLESSANCWNAMLAAYSQLGLPEEGIRLYWEMSS-TGIKANEGTFAGALAACSMLGAVR 669
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G +H + D+ + AL+ MY KC V+ +FE + + ++V+WN++I ++
Sbjct: 670 EGYRIHEQVSSSRYSSDLSLKTALVHMYAKCNRVDAAFHVFEQL-QPDVVAWNAMIAAYA 728
Query: 278 ENGFSCESFDLLIKMMGCEEGFIP 301
+NG++ + +L KM+ G+ P
Sbjct: 729 QNGYAWHALELYSKML---HGYKP 749
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
T+ ++K CG A + G +H GL D F+ + L+ MYGKC V++ +++F +
Sbjct: 47 TYAALLKHCGNAAALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHAL 106
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
P R+L SWN II F++N ++ ++ M G PD T+ +VL
Sbjct: 107 PRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSA--GIKPDSATLSSVL 153
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + G R+HE VS+S S+ + T L+ MY+ C + VF+ L+ +
Sbjct: 659 LAACSMLGAVREGYRIHEQVSSSRYSSD-LSLKTALVHMYAKCNRVDAAFHVFEQLQP-D 716
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIAD 215
+ WNA+++ + +N L ++ ++ KP TF CV ACG G+ D
Sbjct: 717 VVAWNAMIAAYAQNGYAWHALELYSKMLHG--YKPLEPTFLCVFLACGHAGLVD 768
>gi|115473581|ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|22293699|dbj|BAC10044.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|125601219|gb|EAZ40795.1| hypothetical protein OsJ_25273 [Oryza sativa Japonica Group]
Length = 705
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 116/212 (54%), Gaps = 6/212 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVS---ASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
+++AC + G++V E+V AS + + L+ M++ CG ++R VF+S+
Sbjct: 161 VIKACAALGAVAQGRKVWEMVETDIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESM 220
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+ R+L W A++ G + + +V+ +F + S+ D+ VI ACG ++ G
Sbjct: 221 QVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEG-FGVDSLIAATVISACGRAGELQVG 279
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+ +HG A K G GD++VSNAL+ MY KC VE LF +++VSW+S+I G+S+N
Sbjct: 280 TALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQN 339
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G S L +M+ G P+ T+ ++LP
Sbjct: 340 GMHNVSVSLFCEMISL--GINPNSSTLASILP 369
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 101/211 (47%), Gaps = 10/211 (4%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
LQ+C D + +R+H V ++ +L+ Y+ G + RVFD + RN
Sbjct: 63 LQSC---PDFQEARRLHAAVLVGGHGHGTVLV-AQLVRAYAKLGDVAHALRVFDGMPRRN 118
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
F WNA++ G +++ L +F + +D + D FT+P VIKAC + V G V
Sbjct: 119 SFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVW 178
Query: 224 GMA----AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
M A +VFV AL+ M+ KC ++E +FE M R+L +W ++I G +
Sbjct: 179 EMVETDIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHS 238
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E DL M EGF D + TV+
Sbjct: 239 GNWLEVVDLFNHMR--SEGFGVDSLIAATVI 267
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 112/212 (52%), Gaps = 4/212 (1%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
++ ACG ++++G +H + + S D ++ L+ MY CG + +F S
Sbjct: 263 AATVISACGRAGELQVGTALHG-CAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWST 321
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
++++ W++L+ G+++N ++ +S+F E+ S + P++ T ++ + + G
Sbjct: 322 NSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMIS-LGINPNSSTLASILPCLSVLKLIRSG 380
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H + + GL FV +ALI +Y K + +F + +++L WNS++ G++ N
Sbjct: 381 KEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVN 440
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G+S +F L + + G PD +TVV+VLP
Sbjct: 441 GYSDSAFCALRLLQ--KVGLKPDHVTVVSVLP 470
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 10/203 (4%)
Query: 111 KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNAL 170
K I GK +H ++F+++ LI +YS G + +F ++L WN++
Sbjct: 375 KLIRSGKEIHCFSIRHGLERSEFVVSA-LIDLYSKQGLIRVAETIFWLTLDKDLAIWNSM 433
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
V+G+ N Y+D + L LKPD+ T V+ C + G +H K
Sbjct: 434 VAGYAVNG-YSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYC 492
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES---FD 287
+ V+NAL+ MY KC F+E ++F++M ERN V++N +I F ++ ++ FD
Sbjct: 493 INSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFD 552
Query: 288 LLIKMMGCEEGFIPDVITVVTVL 310
L+ + +G PD +T V +L
Sbjct: 553 LMKR-----DGIAPDKVTFVALL 570
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 118/212 (55%), Gaps = 9/212 (4%)
Query: 101 GVLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
G+L+ AC + GK +H L+ + + + T L+ +Y+ CG D+R VFD L
Sbjct: 207 GILVHACKKLGALHQGKWLHGYLIKCGIELGSYLV--TALLDLYAKCGVVRDARSVFDEL 264
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
++ W A++ G+T+N + L +F++ + P++ T V +C + ++ G
Sbjct: 265 HGIDIVSWTAMIVGYTQNGCPEEALKLFLQ-KEQVAVLPNDVTIASVFSSCSQLLNLNLG 323
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+HG++ K+G D V+N+L+ Y KC + +FE + +R++V+WNSII FS+N
Sbjct: 324 RSIHGLSIKLG-SRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQN 382
Query: 280 GFSCESFDLLIKM-MGCEEGFIPDVITVVTVL 310
G + E+ +L +M MG +PD +T+V+VL
Sbjct: 383 GSAYEALELFHQMRMG---SVLPDAVTLVSVL 411
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 117/220 (53%), Gaps = 11/220 (5%)
Query: 96 LKEATGVL----LQACGHEKDIEIGKRVHELVSASTQFSN-DFIINTRLITMYSLCGFPL 150
LKE V+ L+AC ++ + G++VH + +F N D + T L+ MY+ CG
Sbjct: 98 LKECDNVVFSHVLKACSESRNFDEGRKVHCQI---VKFGNPDSFVFTGLVDMYAKCGEIE 154
Query: 151 DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
SR VFD RN+F W+++++G+ +N L D L +F + + ++ + T ++ AC
Sbjct: 155 CSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREEL-IEANQITLGILVHAC 213
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
+ + G +HG K G+ ++ AL+ +Y KC V + +F+ + ++VSW
Sbjct: 214 KKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWT 273
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++I G+++NG E+ L ++ + +P+ +T+ +V
Sbjct: 274 AMIVGYTQNGCPEEALKLFLQKE--QVAVLPNDVTIASVF 311
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 4/195 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ +C ++ +G+ +H L + S D I+ L+ Y+ C D+R VF+++ R
Sbjct: 310 VFSSCSQLLNLNLGRSIHGL--SIKLGSRDPIVTNSLVDFYAKCQMNRDARYVFETISDR 367
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+++S F++N + L +F ++ + L PD T V+ AC + + GS
Sbjct: 368 DVVAWNSIISAFSQNGSAYEALELFHQMRMGSVL-PDAVTLVSVLSACASLNALQVGSSF 426
Query: 223 HGMAAKMGLIG-DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
H A K GL+ +V+V AL+ Y KC E +F+ M +++ V+W+++I G+ G
Sbjct: 427 HAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQGN 486
Query: 282 SCESFDLLIKMMGCE 296
S + M+ E
Sbjct: 487 GRGSLSIFGDMLKAE 501
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 2/164 (1%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
+ D +T+L+++Y G +R VFD++ + W ++ + N + D++ +
Sbjct: 33 LTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSEFRDIVGFYN 92
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
+ + + DN F V+KAC + G VH K G D FV L+ MY KC
Sbjct: 93 RMRVCLK-ECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFG-NPDSFVFTGLVDMYAKC 150
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+E +F+ +RN+ SW+S+I G+ +N + + L +M
Sbjct: 151 GEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRM 194
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 90/202 (44%), Gaps = 4/202 (1%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADLKEATGVL--LQACGHEKDIEIGKRVHELVSAST 127
I + ++ S +AL L + + L +A ++ L AC +++G H
Sbjct: 375 IISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRG 434
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
S++ + T L+T Y+ CG +R +FD + ++ W+A++SG+ LSIF
Sbjct: 435 LLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIF 494
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK-MGLIGDVFVSNALIAMYG 246
++ ELKP+ F ++ AC +G G + M + L+ ++ +
Sbjct: 495 GDMLK-AELKPNEEIFTSILSACSHTGMIGEGWRLFTMICQDYNLVPSTKHYTCMVDLLA 553
Query: 247 KCAFVEEMVKLFEVMPERNLVS 268
+ ++E + + MP + VS
Sbjct: 554 RAGRLKEALDFIQKMPVQPDVS 575
>gi|449470126|ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Cucumis sativus]
Length = 1463
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 115/203 (56%), Gaps = 5/203 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ C IE+G+ +H + + N F+ T+L++MY+ CG D+R+VFD ++ R
Sbjct: 86 LLQTCIDVGSIELGRELHVRMGLVHRV-NPFV-ETKLVSMYAKCGCLKDARKVFDGMQER 143
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL+ W+A++ +++ + + +V+ +F + D L PD F FP +++ACG D+ +
Sbjct: 144 NLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVL-PDAFLFPKILQACGNCEDLETVKLI 202
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + + GL + +SN+++ + KC + K F M ER+ VSWN +I G+ + G
Sbjct: 203 HSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVMIAGYCQKGNG 262
Query: 283 CESFDLLIKMMGCEEGFIPDVIT 305
E+ LL M +GF P ++T
Sbjct: 263 DEARRLLDTM--SNQGFKPGLVT 283
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 117/228 (51%), Gaps = 10/228 (4%)
Query: 84 LSLLQENLHNADLKEAT--GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLIT 141
LSL ++ N D ++ V++ + + + +R+ + +S + F + +I
Sbjct: 231 LSLARKFFGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMS-NQGFKPGLVTYNIMIA 289
Query: 142 MYSL---CGFPLDSRRVFDSLK-TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
YS C +D ++ +S+ +++ W +++SGF+++ + L F ++ ++
Sbjct: 290 SYSQLGDCDLVIDLKKKMESVGLAPDVYTWTSMISGFSQSSRISQALDFFKKMIL-AGVE 348
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
P+ T AC + + G +H A KMG+ + V N+LI MY KC +E +
Sbjct: 349 PNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHV 408
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
F+ + E+++ +WNS+I G+ + G+ ++++L +++ E +P+V+T
Sbjct: 409 FDTILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLR--ESTVMPNVVT 454
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
D RN WN+L++G+ + L+IF ++ S P++ T ++ AC +
Sbjct: 481 DGGVKRNTASWNSLIAGYHQLGEKNKALAIFRQMQS-LNFSPNSVTILSILPACANVMAE 539
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
+HG + L ++ V+N+L+ Y K ++ +F M +++++WNSII G+
Sbjct: 540 KKIKEIHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGY 599
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+G S +F L +M G P+ T+ +++
Sbjct: 600 ILHGCSDSAFQLFDQMRNL--GIRPNRGTLASII 631
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 90/211 (42%), Gaps = 44/211 (20%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC K ++ G +H + + + ++ LI MYS CG +R VFD++ ++++
Sbjct: 360 ACASLKSLQNGLEIH-CFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVY 418
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
WN+++ G+ + +F+ L T + P+ T+ +I C D
Sbjct: 419 TWNSMIGGYCQAGYGGKAYELFMRLRESTVM-PNVVTWNAMISGCIQNGDE--------- 468
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE-----RNLVSWNSIICGFSENG 280
++ + LF++M + RN SWNS+I G+ + G
Sbjct: 469 --------------------------DQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQLG 502
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ + +M F P+ +T++++LP
Sbjct: 503 EKNKALAIFRQMQSLN--FSPNSVTILSILP 531
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 88/188 (46%), Gaps = 20/188 (10%)
Query: 103 LLQACGH---EKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
+L AC + EK I K +H V ++ + L+ Y+ G SR VF+ +
Sbjct: 529 ILPACANVMAEKKI---KEIHGCV-LRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGM 584
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVG 217
++++ WN++++G+ + +F ++ + ++P+ T +I A G G+ D G
Sbjct: 585 SSKDIITWNSIIAGYILHGCSDSAFQLFDQM-RNLGIRPNRGTLASIIHAYGIAGMVDKG 643
Query: 218 ---FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
F S + + ++ + A++ +YG+ + + ++ E MP E ++ W S++
Sbjct: 644 RHVFSS----ITEEHQILPTLDHYLAMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLL 699
Query: 274 --CGFSEN 279
C F N
Sbjct: 700 TACRFHGN 707
>gi|296090396|emb|CBI40215.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 143/264 (54%), Gaps = 23/264 (8%)
Query: 55 KTNNASTQGL--HFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVL---LQACGH 109
+TN+AS + F+Q EES+ +AL LL E LH + + L AC +
Sbjct: 255 QTNSASWAAMIAGFVQN-----EESR---EALELLIE-LHRSGSVPSDSSFTSALSACAN 305
Query: 110 EKDIEIGKRVHEL-VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK--TRNLFQ 166
D+EIG+ +H L + QF N +++N LI+MY+ CG D VF +++ R++
Sbjct: 306 IGDVEIGRVIHSLAIKTGCQF-NSYVMNG-LISMYAKCGNVEDGSHVFRTIRMPKRDVVS 363
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
W A++S + + L +F+++ + +KP+ T ++ ACG + + G H +
Sbjct: 364 WTAIISAYVQAGHGEVALDLFLDMLARG-IKPNQLTVTSLLSACGNLGAIKLGEQFHALI 422
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
K+G +FV N+LI MY KC + E+ +FE MPE +L++WN+++ G ++NG E+
Sbjct: 423 FKLGFDTFLFVGNSLITMYFKCGY-EDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAI 481
Query: 287 DLLIKMMGCEEGFIPDVITVVTVL 310
+ +M EG +PD ++ + VL
Sbjct: 482 KIFEQME--VEGILPDQMSFLGVL 503
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 96/177 (54%), Gaps = 6/177 (3%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTR-NLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
T +I ++ CG D+ ++++ + + N W A+++GF +NE + L + +EL
Sbjct: 230 TTMIAAFAQCGRLDDAIQLYERVPEQTNSASWAAMIAGFVQNEESREALELLIELHRSGS 289
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
+ P + +F + AC I DV G +H +A K G + +V N LI+MY KC VE+
Sbjct: 290 V-PSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGS 348
Query: 256 KLFEV--MPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F MP+R++VSW +II + + G + DL + M+ G P+ +TV ++L
Sbjct: 349 HVFRTIRMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLA--RGIKPNQLTVTSLL 403
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 30/183 (16%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE------- 189
T L+T Y+ G ++R VF+S+ RN+ WNA++SG+ +N + +F E
Sbjct: 105 TILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVA 164
Query: 190 --------------LSSDTEL-----KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
+S EL + ++ ++ +I I+D V KM
Sbjct: 165 SWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVF---VKMC 221
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSENGFSCESFDLL 289
+ + +IA + +C +++ ++L+E +PE+ N SW ++I GF +N S E+ +LL
Sbjct: 222 RTRNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTNSASWAAMIAGFVQNEESREALELL 281
Query: 290 IKM 292
I++
Sbjct: 282 IEL 284
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 53/154 (34%)
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
F NTR+ + L G ++RRVF+ + R++ WN++++G+++N
Sbjct: 40 FQCNTRIQELGRL-GRVEEARRVFNEMIQRDVVSWNSMINGYSQN--------------- 83
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSN------ALIAMYG 246
G + L+ D FV L+ Y
Sbjct: 84 -------------------------------GKVDEARLLFDAFVGKNIRTWTILLTGYA 112
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
K +EE ++FE M ERN+VSWN++I G+ +NG
Sbjct: 113 KEGRIEEAREVFESMTERNVVSWNAMISGYVQNG 146
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+F N I G+ VEE ++F M +R++VSWNS+I G+S+NG
Sbjct: 39 LFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNG 84
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 113/198 (57%), Gaps = 7/198 (3%)
Query: 118 RVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD-SLKTRNLFQWNALVSGFTK 176
++H L+ + + I + +LI Y+ P S VF + + N++ WN+++ T
Sbjct: 34 KLHSLI-ITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTH 92
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF 236
N L+++ LS++ E + L+PD +TFP VI AC G+ D +H MG D++
Sbjct: 93 NGLFSEALSLYSE-TQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLY 151
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL---IKM- 292
+ NALI MY + +++ K+FE MP R++VSWNS+I G++ NG+ E+ ++ IK+
Sbjct: 152 IGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLF 211
Query: 293 MGCEEGFIPDVITVVTVL 310
M F PD++T+ ++L
Sbjct: 212 MEMVNQFKPDLLTITSIL 229
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 144/325 (44%), Gaps = 53/325 (16%)
Query: 28 FPATVIQRNKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLL 87
F A +I + H R S L++ +NN ++ I + ++ALSL
Sbjct: 50 FSAKLIAKYAH-FRDPTSSFSVFRLASPSNN-----VYLWNSIIRALTHNGLFSEALSLY 103
Query: 88 QENLHNADLKEATGV---LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYS 144
E L+ T ++ AC D E+ K +H+ V F +D I LI MY
Sbjct: 104 SET-QRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRV-LDMGFGSDLYIGNALIDMY- 160
Query: 145 LCGF-PLD-SRRVFDSLKTRNLFQWNALVSGFTKN-------ELYTDVLSIFVELSSDTE 195
C F LD +R+VF+ + R++ WN+L+SG+ N E+Y + +F+E+ + +
Sbjct: 161 -CRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVN--Q 217
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
KPD T +++ACG + D+ FG VH G D SN LI MY KC +
Sbjct: 218 FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQ 277
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCE------------------- 296
++F M ++ VSWNS+I + +NG +S + M +
Sbjct: 278 EVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNL 337
Query: 297 ----------EGFIPDVITVVTVLP 311
EG PD+ T++++LP
Sbjct: 338 GLRMISRMRTEGVTPDMATMLSILP 362
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 110/242 (45%), Gaps = 41/242 (16%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQACGH D+E GK VH+ + S + D + LI MY+ CG L S+ VF +K +
Sbjct: 228 ILQACGHLGDLEFGKYVHDYMITSG-YECDTTASNILINMYAKCGNLLASQEVFSGMKCK 286
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVEL-----------------SSDTEL--------- 196
+ WN++++ + +N D L +F + S D L
Sbjct: 287 DSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMR 346
Query: 197 ----KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
PD T ++ C +A G +HG K+GL DV V N LI MY KC +
Sbjct: 347 TEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLR 406
Query: 253 EMVKLFEVMPERNLVSWNSII--CGFSENGFSCESFDLLIKMMGCEE--GFIPDVITVVT 308
++F++M +++V+W ++I CG G ++ G E G +PD + V
Sbjct: 407 NSFQVFKLMKTKDVVTWTALISACGMYGEGKKA------VRAFGEMEAAGIVPDHVAFVA 460
Query: 309 VL 310
++
Sbjct: 461 II 462
>gi|255545590|ref|XP_002513855.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546941|gb|EEF48438.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 144/297 (48%), Gaps = 19/297 (6%)
Query: 27 QFPATVIQRNKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQ----------EITTLCEE 76
Q A V++ N R++ + + +S A+ + + F Q + + C +
Sbjct: 88 QIHACVVKGN---WRNLIVDSAIVSFYAQCGDLESAFCAFFQVREKDVVCWTSVISACSQ 144
Query: 77 SKSLNKALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSASTQFSNDFI 134
+A + + L L V +L+ACG +K ++ G+++H + + +D
Sbjct: 145 QGRGEEAFRMFSQMLGEGFLPNEFTVCAILKACGEKKALKFGRQLHCAI-VKGMYKDDVF 203
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
I T L+ MY+ CG +DS+ VFD ++ RN W ++++G+ + L + + +F +
Sbjct: 204 IGTSLVDMYAKCGEMIDSKEVFDGMRKRNTVTWTSIIAGYARKGLGEEAIRLF-RVMKRR 262
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
++ +N T V++ACG I+ G VH K G+ +V++ + L+ Y KC
Sbjct: 263 KIISNNLTVVSVLRACGSISASLTGREVHAQIIKSGIQSNVYLGSTLVWFYCKCGEFNIA 322
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
K+ + M RN+VSW ++I G+ G+ E+ + L +MM +EG P+ T + L
Sbjct: 323 SKVLQQMSFRNVVSWTAMISGYIGLGYEFEALEFLKEMM--DEGVEPNEFTYSSALK 377
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 108/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG G+ VH + S SN ++ +T L+ Y CG + +V + R
Sbjct: 274 VLRACGSISASLTGREVHAQIIKSGIQSNVYLGST-LVWFYCKCGEFNIASKVLQQMSFR 332
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A++SG+ + L E+ D ++P+ FT+ +KAC + V G +
Sbjct: 333 NVVSWTAMISGYIGLGYEFEALEFLKEMM-DEGVEPNEFTYSSALKACANLESVLQGKLI 391
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K +V+V +ALI MY KC ++ + +++F+ MPERNL+SW ++I ++ NG
Sbjct: 392 HSFANKTPASSNVYVGSALIYMYSKCGYLSDAIQVFDSMPERNLISWKTMILSYARNGLC 451
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L+ +M EG D +V+
Sbjct: 452 REALKLMYRMQA--EGIEVDDYIYASVM 477
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 115/232 (49%), Gaps = 7/232 (3%)
Query: 81 NKALSLLQENLHNA-DLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
++AL L E + N T V +L C D E+G+++H V + I+++
Sbjct: 49 DEALRLFSELIENGVTANNRTFVCILNVCSKRLDFELGRQIHACVVKGNW--RNLIVDSA 106
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+++ Y+ CG + F ++ +++ W +++S ++ + +F ++ + L P
Sbjct: 107 IVSFYAQCGDLESAFCAFFQVREKDVVCWTSVISACSQQGRGEEAFRMFSQMLGEGFL-P 165
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ FT ++KACG + FG +H K DVF+ +L+ MY KC + + ++F
Sbjct: 166 NEFTVCAILKACGEKKALKFGRQLHCAIVKGMYKDDVFIGTSLVDMYAKCGEMIDSKEVF 225
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ M +RN V+W SII G++ G E+ L M I + +TVV+VL
Sbjct: 226 DGMRKRNTVTWTSIIAGYARKGLGEEAIRLFRVMK--RRKIISNNLTVVSVL 275
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 95/177 (53%), Gaps = 4/177 (2%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
++ LI++Y+ G +++R+VFD + R + W A+++G+ L + L +F EL +
Sbjct: 3 VDNNLISVYARLGELIEARKVFDQMHERCVVSWTAMINGYVSFGLDDEALRLFSELIENG 62
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+ +N TF C++ C D G +H K G ++ V +A+++ Y +C +E
Sbjct: 63 -VTANNRTFVCILNVCSKRLDFELGRQIHACVVK-GNWRNLIVDSAIVSFYAQCGDLESA 120
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
F + E+++V W S+I S+ G E+F + +M+G EGF+P+ TV +L
Sbjct: 121 FCAFFQVREKDVVCWTSVISACSQQGRGEEAFRMFSQMLG--EGFLPNEFTVCAILK 175
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+AC + + + GK +H + + SN ++ + LI MYS CG+ D+ +VFDS+ RN
Sbjct: 376 LKACANLESVLQGKLIHSFANKTPASSNVYV-GSALIYMYSKCGYLSDAIQVFDSMPERN 434
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
L W ++ + +N L + L + + ++ ++ D++ + V+ +CG +
Sbjct: 435 LISWKTMILSYARNGLCREALKLMYRMQAEG-IEVDDYIYASVMGSCGDV 483
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
++V N LI++Y + + E K+F+ M ER +VSW ++I G+ G E+ L +++
Sbjct: 1 MYVDNNLISVYARLGELIEARKVFDQMHERCVVSWTAMINGYVSFGLDDEALRLFSELI- 59
Query: 295 CEEGFIPDVITVVTVL 310
E G + T V +L
Sbjct: 60 -ENGVTANNRTFVCIL 74
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 111/227 (48%), Gaps = 8/227 (3%)
Query: 70 ITTLCE----ESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSA 125
I CE E ++L S++ + D G +L+AC + + G +H +
Sbjct: 455 IIAACEQNGNEEETLAHFASMIHSRMEPDDF--TYGSVLKACAGRQALNTGMEIHTRIIK 512
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
S + F+ L+ MY CG + ++ D + + + WNA++SGF+ + D
Sbjct: 513 SGMGFDSFV-GAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHK 571
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
F + + + PDNFT+ V+ C +A VG G +H K L DV++ + L+ MY
Sbjct: 572 FFSRML-EMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMY 630
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
KC +++ +FE P R+ V+WN+++CG++ +G E+ L M
Sbjct: 631 SKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESM 677
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L ++C + +GK +H S F +D I+ T + MY+ CG D+++V S+
Sbjct: 288 LFRSCAALSALRLGKELHSHALKSA-FGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKC 346
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L +NA++ G+ +++ L F +L T L D T + AC I G V
Sbjct: 347 SLQSYNAIIVGYARSDRGFQALKSF-QLLLKTGLGFDEITLSGALNACASIRGDLEGRQV 405
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+A K + ++ V+NA++ MYGKC + E LF++M R+ VSWN+II +NG
Sbjct: 406 HGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNE 465
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ M+ PD T +VL
Sbjct: 466 EETLAHFASMI--HSRMEPDDFTYGSVL 491
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 90/166 (54%), Gaps = 1/166 (0%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
+ D + +I+ Y+ CG +R+ F + R++ WN+++SGF +N + +F+
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
E+ + D + V+KACG + + G VHG+ K G DV +AL+ MY KC
Sbjct: 171 EMGR-CGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKC 229
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
+++ + +F +PE+N VSW+++I G +N + E +L +M G
Sbjct: 230 KRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQG 275
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 104/198 (52%), Gaps = 5/198 (2%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
+ + V+L+ACG ++ ++G +VH LV F D + + L+ MY+ C DS VF
Sbjct: 181 RASLAVVLKACGALEECDMGVQVHGLV-VKFGFDCDVVTGSALLGMYAKCKRLDDSLSVF 239
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
L +N W+A+++G +N+ + L +F E+ + + + ++C ++ +
Sbjct: 240 SELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQG-VGVGVSQSIYASLFRSCAALSAL 298
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G +H A K D+ V A + MY KC + + K+ MP+ +L S+N+II G+
Sbjct: 299 RLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGY 358
Query: 277 --SENGF-SCESFDLLIK 291
S+ GF + +SF LL+K
Sbjct: 359 ARSDRGFQALKSFQLLLK 376
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 101/205 (49%), Gaps = 7/205 (3%)
Query: 72 TLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSN 131
+L ++S+ +K S + E N D +L C + + +GK++H + + +
Sbjct: 561 SLLQQSEDAHKFFSRMLEMGVNPD-NFTYAAVLDTCANLATVGLGKQIHAQI-IKQELQS 618
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I + L+ MYS CG DS+ +F+ R+ WNA++ G+ + L + L +F E
Sbjct: 619 DVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLF-ESM 677
Query: 192 SDTELKPDNFTFPCVIKACG--GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
+KP++ TF V++AC G+ D G M ++ GL + ++ + G+
Sbjct: 678 QLVNVKPNHATFVSVLRACAHMGLVDKGLHY-FDVMLSEYGLDPQSEHYSCMVDILGRSG 736
Query: 250 FVEEMVKLFEVMP-ERNLVSWNSII 273
++E + L + MP E + V W +++
Sbjct: 737 RIDEALNLVQKMPFEADAVIWRNLL 761
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
DV N++I+ Y C ++ K F MPER++VSWNS+I GF +NG +S D+ ++M
Sbjct: 114 DVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMG 173
Query: 294 GCEEGFIPDVITVV 307
C GF + VV
Sbjct: 174 RCGVGFDRASLAVV 187
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
TF + + C + G H G FVSN L+ MY KC +++ K+F+ M
Sbjct: 51 TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIK 291
R++VS+NSII G++ SC D+ K
Sbjct: 111 YLRDVVSYNSIISGYA----SCGEMDIARK 136
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 132/246 (53%), Gaps = 12/246 (4%)
Query: 70 ITTLCEESKSLNKALSLLQE-NLHNADLKE-ATGVLLQACGHEKDIEIGKRVHELVSAST 127
+ T C + + ++L L +E D ++ LL + ++E+G+++H +
Sbjct: 312 LITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTD 371
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
S + ++ L+ MY+ C ++ R+F L ++ W AL+SG+ + L+ D L +F
Sbjct: 372 AIS-EVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLF 430
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
VE+ ++ D+ T+ +++AC +A + G +H + G + +VF +AL+ MY K
Sbjct: 431 VEMHR-AKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAK 489
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSEN---GFSCESFDLLIKMMGCEEGFIPDVI 304
C ++E +++F+ MP RN VSWN++I +++N G + SF+ +I G P+ +
Sbjct: 490 CGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMI-----HSGLQPNSV 544
Query: 305 TVVTVL 310
+ +++L
Sbjct: 545 SFLSIL 550
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
+F + ++ +NAL++G++K D +++F ++ D +P FTF V+ A +
Sbjct: 195 HLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQ-DLGFRPSEFTFAAVLTAGIQM 253
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
D+ FG VH K + +VFV+NAL+ Y K + E KLF MPE + +S+N +I
Sbjct: 254 DDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLI 313
Query: 274 CGFSENGFSCESFDLLIKM 292
+ NG ES +L ++
Sbjct: 314 TCCAWNGRVEESLELFREL 332
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 90/178 (50%), Gaps = 4/178 (2%)
Query: 134 IINTRLITM-YSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
+I+T + M Y G +R +FDS+ R++ W L+ G+ ++ + + ++F ++
Sbjct: 73 VISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCR 132
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ PD+ T ++ V + VHG K+G + V N+L+ Y K +
Sbjct: 133 HG-MVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLG 191
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
LF+ M E++ V++N+++ G+S+ GF+ ++ +L KM + GF P T VL
Sbjct: 192 LACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQ--DLGFRPSEFTFAAVL 247
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 4/199 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
DIE G++VH V N F+ N L+ YS +++R++F + + +N L+
Sbjct: 255 DIEFGQQVHSFVVKCNFVWNVFVANA-LLDFYSKHDRIVEARKLFYEMPEVDGISYNVLI 313
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
+ N + L +F EL T F F ++ ++ G +H A
Sbjct: 314 TCCAWNGRVEESLELFRELQF-TRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDA 372
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
I +V V N+L+ MY KC E ++F + ++ V W ++I G+ + G + L ++
Sbjct: 373 ISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVE 432
Query: 292 MMGCEEGFIPDVITVVTVL 310
M + G D T ++L
Sbjct: 433 MHRAKIG--ADSATYASIL 449
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
+V +N +I Y K + LF+ M +R++V+W +I G++++ E+F+L M
Sbjct: 72 NVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADM- 130
Query: 294 GCEEGFIPDVITVVTVL 310
C G +PD IT+ T+L
Sbjct: 131 -CRHGMVPDHITLATLL 146
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 104/200 (52%), Gaps = 5/200 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-TRNLFQWNAL 170
D G ++H L A T D + L+ MY GF ++R VFD RN WN L
Sbjct: 115 DAGFGTQLHALAMA-TGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGL 173
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
+S + KN+ + + +F E+ ++P+ F F CV+ AC G D+ G VH M + G
Sbjct: 174 MSAYVKNDRCSHAVKVFGEMVWGG-VQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTG 232
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
DVF +NAL+ MY K + +F +PE ++VSWN+ I G +G + +LL+
Sbjct: 233 YDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLL 292
Query: 291 KMMGCEEGFIPDVITVVTVL 310
+M G +P+V T+ ++L
Sbjct: 293 QMK--SSGLVPNVFTLSSIL 310
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC +D+E G++VH +V T + D L+ MYS G + VF +
Sbjct: 208 VVNACTGSRDLEAGRKVHAMV-IRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPET 266
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA +SG + L + +++ S + L P+ FT ++KAC G G +
Sbjct: 267 DVVSWNAFISGCVLHGHDQHALELLLQMKS-SGLVPNVFTLSSILKACAGSGAFNLGRQI 325
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K D +++ L+ MY K +++ K+F+ +P+R+LV WN++I G S
Sbjct: 326 HGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQH 385
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M +EGF + T+ VL
Sbjct: 386 AEALSLFCRMR--KEGFDVNRTTLAAVL 411
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 95/183 (51%), Gaps = 8/183 (4%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
E G LL + + G +H + S F+ + L++ YS C P +RRVFD
Sbjct: 5 ETIGPLLTRYAATQSLLQGAHIHAHLLKSGLFA---VFRNHLLSFYSKCRLPGSARRVFD 61
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
+ W++LV+ ++ N + D L F + S ++ + F P V+K D G
Sbjct: 62 EIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRS-CSVRCNEFVLPVVLKCA---PDAG 117
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF-EVMPERNLVSWNSIICGF 276
FG+ +H +A GL GD+FV+NAL+AMYG FV+E +F E ERN VSWN ++ +
Sbjct: 118 FGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAY 177
Query: 277 SEN 279
+N
Sbjct: 178 VKN 180
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 115/239 (48%), Gaps = 6/239 (2%)
Query: 74 CEESKSLNKALSLL-QENLHNADLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSN 131
C +ALSL + D+ T +L++ + I ++VH L S+
Sbjct: 379 CSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSD 438
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
++N LI Y C + RVF+ + ++ + ++++ ++ + D + +F+E+
Sbjct: 439 SHVVNG-LIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEML 497
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
L PD F ++ AC ++ G VH K + DVF NAL+ Y KC +
Sbjct: 498 RKG-LDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSI 556
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ F +PE+ +VSW+++I G +++G + D+ +M+ +E P+ IT+ +VL
Sbjct: 557 EDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMV--DEHISPNHITMTSVL 613
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G+ +H K GL VF N L++ Y KC ++F+ +P+ VSW+S++ +S
Sbjct: 23 GAHIHAHLLKSGLFA-VF-RNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 279 NGFSCESFDLLIKMMGC 295
N ++ M C
Sbjct: 81 NAMPRDALGAFRSMRSC 97
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 118/214 (55%), Gaps = 4/214 (1%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
+ G +L A G ++++G VH + +++ + + L++MYS C + +VF
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHA-EAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 385
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
++L+ RN WNA++ G+ N V+ +F+++ S + D+FTF ++ C D+
Sbjct: 386 EALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKS-SGYNIDDFTFTSLLSTCAVSHDL 444
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
GS H + K L ++FV NAL+ MY KC +E+ ++FE M +R+ VSWN+II G+
Sbjct: 445 EMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGY 504
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ E+FDL ++M C G + D + + L
Sbjct: 505 VQDENESEAFDLFMRMNSC--GIVSDGACLASTL 536
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 111/208 (53%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL C D+E+G + H ++ N F+ N L+ MY+ CG D+R++F+ + R
Sbjct: 434 LLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNA-LVDMYAKCGALEDARQIFEHMCDR 492
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN ++ G+ ++E ++ +F+ ++S + D +KAC + + G V
Sbjct: 493 DNVSWNTIIGGYVQDENESEAFDLFMRMNS-CGIVSDGACLASTLKACTNVHGLYQGKQV 551
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H ++ K GL + ++LI MY KC +E+ K+F MPE ++VS N++I G+S+N
Sbjct: 552 HCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNLE 611
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M+ +G P IT T++
Sbjct: 612 -EAVVLFQEML--TKGVNPSEITFATIV 636
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 123/243 (50%), Gaps = 21/243 (8%)
Query: 79 SLNKALSLLQENL-HNADLKEAT-GVLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFII 135
+L +A+ L QE L + E T +++AC + + +G + H +++ +++
Sbjct: 609 NLEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYL- 667
Query: 136 NTRLITMYSLCGFPLDSRR------VFDSLKT-RNLFQWNALVSGFTKNELYTDVLSIFV 188
SL G ++SRR +F L + +++ W ++SG ++N Y + L +
Sbjct: 668 ------GISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYK 721
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
E+ D L PD TF V++ C ++ + G +H + + D SN LI MY KC
Sbjct: 722 EMRHDGAL-PDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKC 780
Query: 249 AFVEEMVKLFEVMPER-NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
++ ++F+ M R N+VSWNS+I G+++NG++ ++ + M + +PD IT +
Sbjct: 781 GDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMR--QSHIMPDEITFL 838
Query: 308 TVL 310
VL
Sbjct: 839 GVL 841
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 93/179 (51%), Gaps = 3/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + +I Y G D+R +F + + ++ WN ++SG K + F+ +
Sbjct: 260 DHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMR 319
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ +K T V+ A G +A++ G VH A K+GL +++V ++L++MY KC +
Sbjct: 320 K-SSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKM 378
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E K+FE + ERN V WN++I G++ NG S + +L + M G+ D T ++L
Sbjct: 379 EAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMK--SSGYNIDDFTFTSLL 435
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 5/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+ IGK VH S ++ + ++ +Y+ C + + F+SL+ +++ WN+++S
Sbjct: 76 LRIGKAVHS-KSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLE-KDVTAWNSMLS 133
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
++ VL FV L + + P+ FTF V+ +V FG +H KMGL
Sbjct: 134 MYSSIGQPGKVLRSFVSLFENL-IFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLE 192
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ + AL+ MY KC + + ++F+ + + N V W + G+ + G E+ + +M
Sbjct: 193 RNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERM 252
Query: 293 MGCEEGFIPDVITVVTVL 310
G EG PD + VTV+
Sbjct: 253 RG--EGHRPDHLAFVTVI 268
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 11/199 (5%)
Query: 82 KALSLLQENLHNADL-KEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
+AL +E H+ L +AT V +L+ C + G+ +H L+ ++ NT L
Sbjct: 715 EALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNT-L 773
Query: 140 ITMYSLCGFPLDSRRVFDSLKTR-NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
I MY+ CG S +VFD ++ R N+ WN+L++G+ KN D L IF + + + P
Sbjct: 774 IDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ-SHIMP 832
Query: 199 DNFTFPCVIKACGGIADVGFGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
D TF V+ AC V G + M + G+ V ++ + G+ +++E
Sbjct: 833 DEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDF 892
Query: 258 FEVM---PERNLVSWNSII 273
E P+ L W+S++
Sbjct: 893 IEAQNLKPDARL--WSSLL 909
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 112/210 (53%), Gaps = 3/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
L+ AC KD+ +G ++H + ++ + L+ MY+ CG +R+VFD L
Sbjct: 184 ATLVSACAELKDLGVGMKLHSHIR-EMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLS 242
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
++++ W+AL+ G+ KN T+ L +F E++ + ++P+ T VI AC + D+ G
Sbjct: 243 DKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGR 302
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH + V ++N+LI M+ KC ++ ++F+ M ++L+SWNS++ GF+ +G
Sbjct: 303 WVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHG 362
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ M + PD IT + VL
Sbjct: 363 LGREALAQFRLMQTTD--LQPDEITFIGVL 390
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 109/208 (52%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C + ++GK +H V +D I T L+ MY+ CG +R +F+ + R
Sbjct: 85 LLKGCALLLEFKVGKVLHGQV-VKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHR 143
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N W +++SG+ KN + L ++ ++ D PD T ++ AC + D+G G +
Sbjct: 144 NKVVWTSMISGYMKNHCPNEALLLYKKMEEDG-FSPDEVTMATLVSACAELKDLGVGMKL 202
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +M + + +AL+ MY KC ++ ++F+ + ++++ +W+++I G+ +N S
Sbjct: 203 HSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRS 262
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L ++ G P+ +T++ V+
Sbjct: 263 TEALQLFREVAG-GSNMRPNEVTILAVI 289
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 2/156 (1%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VF + ++ WN+++ F + + L + E+ + PD FTFP ++K C +
Sbjct: 34 VFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLL 93
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+ G +HG K L D+++ L+ MY C ++ LFE M RN V W S+I
Sbjct: 94 EFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMIS 153
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G+ +N E+ L KM E+GF PD +T+ T++
Sbjct: 154 GYMKNHCPNEALLLYKKME--EDGFSPDEVTMATLV 187
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 23/205 (11%)
Query: 82 KALSLLQENLHNADLK--EATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
+AL L +E ++++ E T + ++ AC D+E G+ VH+ ++ TQ + +N
Sbjct: 264 EALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYIT-RTQKGHSVSLNNS 322
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI M+S CG ++R+FDS+ ++L WN++V+GF + L + L+ F L T+L+P
Sbjct: 323 LIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQF-RLMQTTDLQP 381
Query: 199 DNFTFPCVIKACGGIADVGFGS----------GVHGMAAKMGLIGDVFVSNALIAMYGKC 248
D TF V+ AC V G GV + G + D+ L+A
Sbjct: 382 DEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAE---- 437
Query: 249 AFVEEMVKLFEVMPERNLVSWNSII 273
E +++ + P+ + W S++
Sbjct: 438 --AREFIRVMPLQPDGAI--WGSML 458
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 119/225 (52%), Gaps = 6/225 (2%)
Query: 86 LLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSL 145
+ Q+N+H ++ + +L AC + G+ +H V +N FI + L+ MY+
Sbjct: 214 MRQDNVHPSEYTMVS--VLAACAMLGGLHQGRWIHGSVIKYGLSTNSFI-SASLLDMYAK 270
Query: 146 CGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPC 205
C D+RRVFD L+ ++ W A++ G+T+N+ D L +F+ + P++ T
Sbjct: 271 CEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQLFLH-KKFVSIVPNSVTIAT 329
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
VI A + + G VH + K+G + V NAL+ MY KC + E +F + ++
Sbjct: 330 VISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQALPEANSIFGRILIKD 389
Query: 266 LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+V+WNS++ G+SENG + ES L +M +G PD I+VV L
Sbjct: 390 VVAWNSMMAGYSENGMANESLVLFNRMR--MQGISPDAISVVNAL 432
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 109/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ A + + +G+ VH + +D + N L+ MY+ C ++ +F + +
Sbjct: 330 VISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNA-LVDMYAKCQALPEANSIFGRILIK 388
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN++++G+++N + + L +F + + PD + + AC +AD+ G G
Sbjct: 389 DVVAWNSMMAGYSENGMANESLVLFNRMRMQG-ISPDAISVVNALSACVCLADLHIGKGF 447
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K + +++V+ AL+ +Y KCA + ++F M +RN V+W+++I G+ G S
Sbjct: 448 HTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGGYGMQGDS 507
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
S DL +M+ +E P+ + ++L
Sbjct: 508 AGSIDLFNEML--KENIHPNEVVFTSIL 533
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 8/211 (3%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFI-INTRLITMYSLCGFPLDSRRVFDSLK 160
+LL ACG + + + +H + T I T+L++ Y+ G +R V D
Sbjct: 26 LLLPACGTLRSL---RALHGRLLLLTSGLLRGIRARTKLLSCYAALGDLASARGVLDGTP 82
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD-NFTFPCVIKACGGIADVGFG 219
+ + + ++ + D +++ ++ + +KAC AD +G
Sbjct: 83 RPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAAAQADVVLSLALKACVRSADFRYG 142
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H K G D FV N+L+ MY K +E K+F+ +PERN+VSW S++ G +N
Sbjct: 143 RRLHCDVVKAG-GADGFVMNSLVDMYAKAGDLENARKVFDRVPERNVVSWTSMLSGSIQN 201
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + E L +M ++ P T+V+VL
Sbjct: 202 GIAEEGLVLFNEMR--QDNVHPSEYTMVSVL 230
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 6/208 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
+L++C + + G+++H L+ + T D ++ TRL+ +Y+ CG +RRVFD +
Sbjct: 72 ATILRSCVLSRAVRPGRQLHARLLVSGTGL--DAVLATRLVDLYASCGHVSLARRVFDEM 129
Query: 160 KTR-NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ N+F WN L+ + ++ + ++ + + +KPDNFT+P V+KAC + D+
Sbjct: 130 PNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSA 189
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G VH + DVFV LI MY KC ++E +F R+ WNS+I +
Sbjct: 190 GREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQ 249
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITV 306
NG E+ L M EG P + T+
Sbjct: 250 NGRPAEALTLCRNMAA--EGIAPTIATL 275
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC D+ G+ VH+ V T ++ D + T LI MY+ CG ++ VF+ R
Sbjct: 177 VLKACAALLDLSAGREVHDRV-MRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIR 235
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN++++ +N + L++ ++++ + P T I A + + G +
Sbjct: 236 DAAVWNSMIAACGQNGRPAEALTLCRNMAAEG-IAPTIATLVSAISAAAVASALPRGREL 294
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + G + +L+ MY K +V LFE + R L+SWN++ICGF +G +
Sbjct: 295 HGYGWRRGFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHA 354
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+L +M E +PD IT V VL
Sbjct: 355 DHAFELFSRMRS-EAQVMPDHITFVGVL 381
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F + + T L+ MY+ G+ + + +F+ L R L WNA++ GF + +F
Sbjct: 303 FGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFS 362
Query: 189 ELSSDTELKPDNFTFPCVIKAC--GGI 213
+ S+ ++ PD+ TF V+ AC GG+
Sbjct: 363 RMRSEAQVMPDHITFVGVLSACNHGGM 389
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 203 FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ ++++C V G +H G D ++ L+ +Y C V ++F+ MP
Sbjct: 71 YATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVFDEMP 130
Query: 263 ER-NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ N+ WN +I ++ +G CE+ L + M PD T VL
Sbjct: 131 NQGNVFLWNVLIRAYARDG-PCEAAIELYRAMLAYGSMKPDNFTYPPVL 178
>gi|125556039|gb|EAZ01645.1| hypothetical protein OsI_23682 [Oryza sativa Indica Group]
Length = 615
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 114/210 (54%), Gaps = 6/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G ++ A G+ K G++ H V + + I+ + + MY+ CG +++R+VFD ++
Sbjct: 249 GSMMTALGNSKRGSQGRQAHAQV-VTRGLCGNVIVESSTLDMYAKCGLMVEARKVFDRMQ 307
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN AL+ G+ +N Y V+++F E+ + D ++ V++AC G++ V G
Sbjct: 308 VRNEVSRCALLGGYCQNGEYEKVIALFREMDKE---DGDWYSLGTVLRACAGLSSVKPGK 364
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H +M DV V +AL+ +Y KC V+ +FE RN ++WN++I GF++NG
Sbjct: 365 EIHCRFLRMAGWRDVVVESALVDLYAKCGAVDYAYSVFEASTVRNTITWNAMIGGFAQNG 424
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L +M+ EG PD I+ + VL
Sbjct: 425 HGERAINLFNRMV--REGPRPDYISFIGVL 452
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 113/235 (48%), Gaps = 10/235 (4%)
Query: 81 NKALSLLQENLHNADLK-----EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
+AL+ L++ L AD A ++AC +D G +H V F +D ++
Sbjct: 122 RRALASLRDMLAGADDDVSPNAHALSAAVKACAVLRDRNAGACLHGSVLVRG-FGDDGVV 180
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
+ L+ MY P D+R+VF+ ++ + + +L+S F +N+ + + + F +
Sbjct: 181 LSSLVDMYGHVAAPGDARKVFEEMRAPDGICYTSLISAFVRNDWFEEAVRWFRSMLMMNG 240
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
++PD TF ++ A G G H GL G+V V ++ + MY KC + E
Sbjct: 241 VRPDGCTFGSMMTALGNSKRGSQGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGLMVEAR 300
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F+ M RN VS +++ G+ +NG E L + M E+G D ++ TVL
Sbjct: 301 KVFDRMQVRNEVSRCALLGGYCQNG-EYEKVIALFREMDKEDG---DWYSLGTVL 351
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA-FVEEMVKLFEVMPERNLVSWNSIICGF 276
G +HG AA+ GL+ D +++NAL+A Y + + ++ F+ +P R++V+ +SI+ F
Sbjct: 56 LGCCLHGRAARAGLLADRYLANALLAFYVRLPRHLPHALRAFDDLPRRDVVAHSSILAAF 115
Query: 277 SENGFSCESFDLLIKMM-GCEEGFIPDV 303
G + L M+ G ++ P+
Sbjct: 116 LRAGMPRRALASLRDMLAGADDDVSPNA 143
>gi|413944103|gb|AFW76752.1| hypothetical protein ZEAMMB73_846363 [Zea mays]
Length = 562
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 108/209 (51%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LLQ+ GK VH + S+ D +NT+L+ YS G +RRVFD +
Sbjct: 17 LLQSSMGANAFRQGKSVHHRAIITSSASPPDLHLNTKLVIFYSHFGDVAAARRVFDGMPH 76
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ W A+VSG+ KN + L +F + + +P+ FTF ++AC G G
Sbjct: 77 RSVVSWTAMVSGYAKNSRPQEALDLFAFMLR-SGARPNQFTFGSAVRACTGARCARSGEQ 135
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H AAK GD+FV +AL+ M+ +C V + +LF M ++LVSWNS++ GF E
Sbjct: 136 IHACAAKGRFAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNSLMRGFVEREH 195
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L M+ +G +PD T + L
Sbjct: 196 CNDALGLFDSML--RDGMLPDHFTFGSAL 222
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 118/238 (49%), Gaps = 7/238 (2%)
Query: 76 ESKSLNKALSLLQENLHNADLKE--ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
E + N AL L L + L + G L+ACG + + +H + + +
Sbjct: 192 EREHCNDALGLFDSMLRDGMLPDHFTFGSALKACGAISVLFNVELIHACIIKLGYWDENV 251
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTD-VLSIFVELSS 192
I + LI Y+ C +R ++DS+ +L AL+SG++ + Y+D + +F ++
Sbjct: 252 AIAS-LIDSYAKCRSLSSARVIYDSMCEPDLVSSTALISGYSMDRNYSDDAMKLFCKIHR 310
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
L+ D ++ C +A + FG+ +H K +GD+ + NAL+ MY K
Sbjct: 311 KG-LRIDAILLSSLLGVCANVASIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGEFL 369
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + F+ MP RN++SW S+I +++GF ++ L +M E+G P+ +T +++L
Sbjct: 370 DSRRAFDEMPNRNVISWTSLITSCAQHGFGEDAVTLFARME--EDGVKPNDVTFLSLL 425
>gi|302796918|ref|XP_002980220.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
gi|300151836|gb|EFJ18480.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
Length = 739
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 113/212 (53%), Gaps = 6/212 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELV-SASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK- 160
+L AC + D + +HE + S + ++ LI Y CG P D+RRVFDSL+
Sbjct: 240 VLGACSNLGDRSQVRVIHEFIASGGLELDKKLVVANTLIHTYGRCGSPSDARRVFDSLQH 299
Query: 161 -TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP-DNFTFPCVIKACGGIADVGF 218
RN W ++++ +T NE + ++ E+ E K D + CV++AC ++ +
Sbjct: 300 SARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREESKKMDPVAYLCVLEACSSLSALKV 359
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G VH G ++ ++ A++ MY KC + E ++F+ M RN+++WNS++ G+++
Sbjct: 360 GRQVHEEIVAAGFGDELPLAGAIVNMYCKCGSLVEAREVFDGMKARNMIAWNSMMGGYTQ 419
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+G + L + C +G +PD IT VT+L
Sbjct: 420 HGHPKRALQLF--ELACLDGVLPDEITFVTIL 449
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 9/181 (4%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + L+ +Y G + FD + +N+F W ++S F +N + + L +F ++
Sbjct: 68 DTYLGNNLVRVYGKFGGLDRAWAAFDRIAAKNVFSWTIVISAFAQNGHHREALVLFRQME 127
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHG--MAAKMGLIGDVFVSNALIAMYGKCA 249
+ +K + T V+ C I D+ G +HG +AAK DV + NAL+ MY KC
Sbjct: 128 REG-VKANEVTLAAVLGICSSIKDLAGGRSIHGRVIAAKK----DVVIGNALVNMYSKCG 182
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
+ E F+ M R++VSW ++I SE+G E+ ++ +M+ E P+ I+ + V
Sbjct: 183 SLREARASFQEMVVRDVVSWTTMITALSEHGEWNEAVEIFWEMV--SENVAPNEISCLAV 240
Query: 310 L 310
L
Sbjct: 241 L 241
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL 289
GL D ++ N L+ +YGK ++ F+ + +N+ SW +I F++NG E+ L
Sbjct: 64 GLDADTYLGNNLVRVYGKFGGLDRAWAAFDRIAAKNVFSWTIVISAFAQNGHHREALVLF 123
Query: 290 IKMMGCEEGFIPDVITVVTVL 310
+M EG + +T+ VL
Sbjct: 124 RQME--REGVKANEVTLAAVL 142
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 144/270 (53%), Gaps = 14/270 (5%)
Query: 41 RSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEAT 100
R +F E S SL + + +T EE+++L+ L + +E ++ ++
Sbjct: 119 RQVFDEMPSRSLVSWNT--------MIGSLTQNGEENEALDLLLQMQREGTPFSEFTISS 170
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L AC + + + +H + N F+ T L+ +Y+ CG D+ VF+S+
Sbjct: 171 --VLCACAAKCALSECQLLHAFAIKAAMDLNVFVA-TALLDVYAKCGLMKDAVCVFESMP 227
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ W+++ +G+ +NE+Y L++F + + +T LK D F VI AC G+A + G
Sbjct: 228 DRSVVTWSSMAAGYVQNEMYEQALALFRK-AWETGLKHDQFLMSSVICACAGLAAMIEGK 286
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
++ + +K G ++FV+++LI MY KC +EE K+F + +RN+V WN++I G S +
Sbjct: 287 QMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHA 346
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S E L KM + G P+ +T V+VL
Sbjct: 347 RSLEVMILFEKMQ--QMGLSPNDVTFVSVL 374
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C K + GK H + D + + LI MYS CG +R+VFD + +R
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILL-MGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSR 128
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP-DNFTFPCVIKACGGIADVGFGSG 221
+L WN ++ T+N + L + +++ E P FT V+ AC +
Sbjct: 129 SLVSWNTMIGSLTQNGEENEALDLLLQM--QREGTPFSEFTISSVLCACAAKCALSECQL 186
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H A K + +VFV+ AL+ +Y KC +++ V +FE MP+R++V+W+S+ G+ +N
Sbjct: 187 LHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEM 246
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L K E G D + +V+
Sbjct: 247 YEQALALFRK--AWETGLKHDQFLMSSVI 273
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 5/169 (2%)
Query: 145 LCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT--ELKPDNFT 202
+C F +S R + K + +FQ+ +L T+ S VE T + + +
Sbjct: 6 VCHFASNSGRYREKGKGKRIFQFLSLRVCTTQFFASLSSSSCIVECEKPTTKDFNATHVS 65
Query: 203 FPC-VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
F ++K C + G H MGL D+ SN LI MY KC V+ ++F+ M
Sbjct: 66 FVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEM 125
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
P R+LVSWN++I ++NG E+ DLL++M EG T+ +VL
Sbjct: 126 PSRSLVSWNTMIGSLTQNGEENEALDLLLQMQ--REGTPFSEFTISSVL 172
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 84/167 (50%), Gaps = 4/167 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK+++ L+S S SN F+ ++ LI MY+ CG +S +VF ++ RN+ WNA++SG +
Sbjct: 285 GKQMNALLSKSGFCSNIFVASS-LIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLS 343
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK-MGLIGD 234
++ +V+ +F E L P++ TF V+ ACG + V G + K L +
Sbjct: 344 RHARSLEVMILF-EKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPN 402
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS-WNSIICGFSENG 280
VF + ++ + + E L +P S W S++ +G
Sbjct: 403 VFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHG 449
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 7/211 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL--K 160
L+QAC + G+ +H +A F + L+ +Y CG + +VFD + +
Sbjct: 122 LIQACARLLALREGECLHA-EAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVR 180
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RNL WN++++ F N +VL++F E+ + PD FT V+ AC + G
Sbjct: 181 GRNLVSWNSMLNSFAANGRPNEVLTVFWEMLG-VDFAPDGFTIVSVLTACAEFGALALGR 239
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSEN 279
VH K+GL+ + VSNALI +Y KC V + ++FE M R +VSW S+I G + N
Sbjct: 240 RVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAAN 299
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
GF E+ +L M E +P IT+V VL
Sbjct: 300 GFGKEALELFSLME--REKLVPTEITMVGVL 328
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 72/127 (56%), Gaps = 4/127 (3%)
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
+ +EL PD T+P +I+AC + + G +H AAK G + VFV N+L+ +Y
Sbjct: 102 VALELHRRRLALPDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLY 161
Query: 246 GKCAFVEEMVKLFEVMP--ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
G C E K+F+ MP RNLVSWNS++ F+ NG E + +M+G + F PD
Sbjct: 162 GACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVD--FAPDG 219
Query: 304 ITVVTVL 310
T+V+VL
Sbjct: 220 FTIVSVL 226
>gi|115468918|ref|NP_001058058.1| Os06g0611200 [Oryza sativa Japonica Group]
gi|113596098|dbj|BAF19972.1| Os06g0611200 [Oryza sativa Japonica Group]
Length = 615
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 114/210 (54%), Gaps = 6/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G ++ A G+ K G++ H V + + I+ + + MY+ CG +++R+VFD ++
Sbjct: 249 GSMMTALGNSKRGSQGRQAHAQV-VTRGLCGNVIVESSTLDMYAKCGLMVEARKVFDRMQ 307
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN AL+ G+ +N Y V+++F E+ + D ++ V++AC G++ V G
Sbjct: 308 VRNEVSRCALLGGYCQNGEYEKVIALFREMDKE---DGDWYSLGTVLRACAGLSSVKPGK 364
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H +M DV V +AL+ +Y KC V+ +FE RN ++WN++I GF++NG
Sbjct: 365 EIHCRFLRMAGWRDVVVESALVDLYAKCGAVDYAYSVFEASTVRNTITWNAMIGGFAQNG 424
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L +M+ EG PD I+ + VL
Sbjct: 425 HGERAINLFNRMV--REGPRPDYISFIGVL 452
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 113/235 (48%), Gaps = 10/235 (4%)
Query: 81 NKALSLLQENLHNADLK-----EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
+AL+ L++ L AD A ++AC +D G +H V F +D ++
Sbjct: 122 RRALASLRDMLAGADDDVSPNAHALSAAVKACAVLRDRNAGACLHGSVLVRG-FGDDGVV 180
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
+ L+ MY P D+R+VF+ ++ + + +L+S F +N+ + + + F +
Sbjct: 181 LSSLVDMYGHVAAPGDARKVFEEMRAPDGICYTSLISAFVRNDWFEEAVRWFRSMLMMNG 240
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
++PD TF ++ A G G H GL G+V V ++ + MY KC + E
Sbjct: 241 VRPDGCTFGSMMTALGNSKRGSQGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGLMVEAR 300
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F+ M RN VS +++ G+ +NG E L + M E+G D ++ TVL
Sbjct: 301 KVFDRMQVRNEVSRCALLGGYCQNG-EYEKVIALFREMDKEDG---DWYSLGTVL 351
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA-FVEEMVKLFEVMPERNLVSWNSIICGF 276
G +HG AA+ GL+ D +++NAL+A Y + + ++ F+ +P R++V+ +SI+ F
Sbjct: 56 LGCCLHGRAARAGLLADRYLANALLAFYVRLPRHLPHALRAFDDLPRRDVVAHSSILAAF 115
Query: 277 SENGFSCESFDLLIKMM-GCEEGFIPDV 303
G + L M+ G ++ P+
Sbjct: 116 LRAGMPRRALASLRDMLAGADDDVSPNA 143
>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 127/236 (53%), Gaps = 6/236 (2%)
Query: 75 EESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFI 134
E+++++ S+L E + + A+ +L +CG+ KDI GK +H L+ S F +
Sbjct: 247 EDTEAVKAFQSMLVEKVQPNEYTYAS--VLISCGNLKDIGNGKLIHGLMVKSG-FESALA 303
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
T L+TMY C DS RVF ++ N W +L+SG +N L F ++ D+
Sbjct: 304 SQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDS 363
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+KP++FT ++ C +A G +HG+ K G D + + LI +YGKC +
Sbjct: 364 -IKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMA 422
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ + E +++S N++I +++NGF E+ DL +M+ G P+ +TV++VL
Sbjct: 423 RLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINL--GLQPNDVTVLSVL 476
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 4/178 (2%)
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
I ++L+ CG +R+VFD + R++ WN+L++ K+ + + ++ + ++
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL-IGDVFVSNALIAMYGKCAFVE 252
L PD +T V KA ++ HG+A +GL + +VFV +AL+ MY K
Sbjct: 160 NVL-PDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTR 218
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E + + + E+++V ++I G+S+ G E+ M+ E P+ T +VL
Sbjct: 219 EAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSML--VEKVQPNEYTYASVL 274
>gi|414887787|tpg|DAA63801.1| TPA: hypothetical protein ZEAMMB73_367984 [Zea mays]
Length = 711
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 115/212 (54%), Gaps = 6/212 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVS---ASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
+L+AC ++E G++V E V A + + L+ M++ CG ++R +F+S+
Sbjct: 167 VLKACAALGEVEQGRKVQENVETDIARGIAKGNVFVQCALVDMFAKCGCLGEARNMFESM 226
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
R+L W A++ G + + +V+++ + S+ +PD+ F VI ACG + ++ G
Sbjct: 227 GVRDLASWTAMIGGAVRGGDWLEVMTLLKRMKSEG-FRPDSMIFATVIPACGKVKELRTG 285
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+HG A K G+ D+ V NAL+ MY KCA ++ LF + +++ SW++II G S+N
Sbjct: 286 MALHGYAVKCGVGDDICVPNALVDMYCKCARLDMAASLFWSIDHKDVFSWSTIIAGHSQN 345
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
S L +M+ G P+ T+ ++LP
Sbjct: 346 RIYNVSVSLFTEMVA--SGIKPNSTTIASILP 375
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 84/162 (51%), Gaps = 6/162 (3%)
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
RVFD + TRN F WNA++ G +++ L + ++ D + D FT+P V+KAC +
Sbjct: 115 RVFDGMPTRNSFAWNAVIKGLVDAGRFSEALRWYWDMVRDGSVVADRFTYPPVLKACAAL 174
Query: 214 ADVGFGSGVHGMA----AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSW 269
+V G V A+ G+VFV AL+ M+ KC + E +FE M R+L SW
Sbjct: 175 GEVEQGRKVQENVETDIARGIAKGNVFVQCALVDMFAKCGCLGEARNMFESMGVRDLASW 234
Query: 270 NSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++I G G E LL +M EGF PD + TV+P
Sbjct: 235 TAMIGGAVRGGDWLEVMTLLKRMK--SEGFRPDSMIFATVIP 274
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 113/211 (53%), Gaps = 4/211 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
++ ACG K++ G +H + +D + L+ MY C + +F S+
Sbjct: 270 ATVIPACGKVKELRTGMALHGY-AVKCGVGDDICVPNALVDMYCKCARLDMAASLFWSID 328
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+++F W+ +++G ++N +Y +S+F E+ + + +KP++ T ++ + + + +G
Sbjct: 329 HKDVFSWSTIIAGHSQNRIYNVSVSLFTEMVA-SGIKPNSTTIASILPSISELRLLRYGK 387
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H + + L F+++ALI Y + ++ + +FE P+ +LV NS+I G+ N
Sbjct: 388 EIHCFSLRNRLEHSEFLASALIDFYCRQGYIRDAQIVFEFKPKNDLVVLNSMIRGYVVNK 447
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
S ES L++ + +EG PD +TVV+VLP
Sbjct: 448 DS-ESALRLLRALL-KEGLRPDHVTVVSVLP 476
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 115/237 (48%), Gaps = 6/237 (2%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
+++ N ++SL E + + +T + +L + + + GK +H S + +
Sbjct: 344 QNRIYNVSVSLFTEMVASGIKPNSTTIASILPSISELRLLRYGKEIH-CFSLRNRLEHSE 402
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
+ + LI Y G+ D++ VF+ +L N+++ G+ N+ ++ +
Sbjct: 403 FLASALIDFYCRQGYIRDAQIVFEFKPKNDLVVLNSMIRGYVVNK-DSESALRLLRALLK 461
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
L+PD+ T V+ C + + G +H A + + V+NAL MY KC +E
Sbjct: 462 EGLRPDHVTVVSVLPLCNQPSRLLQGKELHAYAIRHNISSCFSVTNALTDMYCKCGCLEI 521
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F +M ERN V++N++I ++G + ++F +L +M +G PD +T V +L
Sbjct: 522 ANKIFLLMTERNTVTYNTLISSLGKHGHADQAF-ILFDLMK-RDGVSPDKVTFVALL 576
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 118/211 (55%), Gaps = 7/211 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGF-PLDSRRVFDSLKT 161
+L A + +D+ G + H + S N + + LI +YS CG LD R+VFD +
Sbjct: 246 VLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHV-GSGLIDLYSKCGGCMLDCRKVFDEISN 304
Query: 162 RNLFQWNALVSGFTKNELYTD-VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+L WN ++SG++ E +D L F +L +PD+ + CVI AC ++ G
Sbjct: 305 PDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGH-RPDDCSLVCVISACSNMSSPSQGR 363
Query: 221 GVHGMAAKMGLIGD-VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
VHG+A K+ + + + V+NALIAMY KC + + LF+ MPE N VS+NS+I G++++
Sbjct: 364 QVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQH 423
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G +S L +M+ E F P IT ++VL
Sbjct: 424 GMGFQSLHLFQRML--EMDFTPTNITFISVL 452
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 113/255 (44%), Gaps = 46/255 (18%)
Query: 92 HNADLKEATGVLLQACGHEKDIEIGKRVHEL-----VSASTQFSNDFIINTRLITMYSLC 146
H + L + L+ C +D+ GK +H L V ST SN F++ +YS C
Sbjct: 3 HFSSLLHSFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLL------LYSKC 56
Query: 147 GFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL---------------- 190
+RRVFD N+F +N L+S + K +F E+
Sbjct: 57 RRLSAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYA 116
Query: 191 -SSDTE-------------LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF 236
DT+ L D FT +I ACG +VG +H ++ GL V
Sbjct: 117 RRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACG--INVGLIRQLHALSVVTGLDSYVS 174
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPE-RNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
V NALI Y K F++E ++F + E R+ VSWNS++ + ++ ++ +L ++M
Sbjct: 175 VGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEM--T 232
Query: 296 EEGFIPDVITVVTVL 310
G I D+ T+ +VL
Sbjct: 233 VRGLIVDIFTLASVL 247
>gi|242049240|ref|XP_002462364.1| hypothetical protein SORBIDRAFT_02g024422 [Sorghum bicolor]
gi|241925741|gb|EER98885.1| hypothetical protein SORBIDRAFT_02g024422 [Sorghum bicolor]
Length = 520
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 135/283 (47%), Gaps = 14/283 (4%)
Query: 33 IQRNKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQ--EN 90
+Q H++R K K S + S+ +N A + + T++C L K +Q E
Sbjct: 68 VQSRLHAMR---KGKESFANSS-SNQAQPERSNIFSNNTSVCPSITKLTKEDMFMQIVEL 123
Query: 91 LHNADLKEATGVLLQA---CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCG 147
+ +L A C K + G + H L+ + + I + LI+ YS CG
Sbjct: 124 HRRGQISSDASILASALSYCADGKTLTAGVQFHALL-VKVGYVSSIPIGSSLISFYSRCG 182
Query: 148 FPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVI 207
+ RVF ++ +N W AL+SG+ ++ L +F L + KP++ TF +
Sbjct: 183 QLEIAHRVFQNMTAKNTVTWTALISGYAQDNQVEPCLHLFA-LMRRSVCKPNDITFATIF 241
Query: 208 KACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLV 267
C A + G V + +MG V VSNALI+MY KC + E +FE + ++LV
Sbjct: 242 SVCTNHAFLVLGKSVQALQMRMGFDSYVHVSNALISMYAKCGSIGEARAVFESITCKDLV 301
Query: 268 SWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
SWNS+I G+S++G + LL +M G IPD I+ + VL
Sbjct: 302 SWNSLIFGYSQHGLAEHCLGLLKEMEG---HIIPDAISFLGVL 341
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 87/181 (48%), Gaps = 4/181 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+ C + + +GK V L F + ++ LI+MY+ CG ++R VF+S+
Sbjct: 238 ATIFSVCTNHAFLVLGKSVQAL-QMRMGFDSYVHVSNALISMYAKCGSIGEARAVFESIT 296
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
++L WN+L+ G++++ L L + E+ + + PD +F V+ +C V G
Sbjct: 297 CKDLVSWNSLIFGYSQHGLAEHCLGLLKEM--EGHIIPDAISFLGVLSSCRHACLVAEGR 354
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSEN 279
+ G+I ++ + ++ ++G+ ++E L + MP N V W S++ +
Sbjct: 355 RCFRAMIEHGVIPEIDHYSCMVDLFGRAGLLDEAWDLIQTMPMPPNGVIWGSLLASCRVH 414
Query: 280 G 280
G
Sbjct: 415 G 415
>gi|125597837|gb|EAZ37617.1| hypothetical protein OsJ_21952 [Oryza sativa Japonica Group]
Length = 615
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 114/210 (54%), Gaps = 6/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G ++ A G+ K G++ H V + + I+ + + MY+ CG +++R+VFD ++
Sbjct: 249 GSMMTALGNSKRGSQGRQAHAQV-VTRGLCGNVIVESSTLDMYAKCGLMVEARKVFDRMQ 307
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN AL+ G+ +N Y V+++F E+ + D ++ V++AC G++ V G
Sbjct: 308 VRNEVSRCALLGGYCQNGEYEKVIALFREMDKE---DGDWYSLGTVLRACAGLSSVKPGK 364
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H +M DV V +AL+ +Y KC V+ +FE RN ++WN++I GF++NG
Sbjct: 365 EIHCRFLRMAGWRDVVVESALVDLYAKCGAVDYAYSVFEASTVRNTITWNAMIGGFAQNG 424
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L +M+ EG PD I+ + VL
Sbjct: 425 HGERAINLFNRMV--REGPRPDYISFIGVL 452
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 113/235 (48%), Gaps = 10/235 (4%)
Query: 81 NKALSLLQENLHNADLK-----EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
+AL+ L++ L AD A ++AC +D G +H V F +D ++
Sbjct: 122 RRALASLRDMLAGADDDVSPNAHALSAAVKACAVLRDRNAGACLHGSVLVRG-FGDDGVV 180
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
+ L+ MY P D+R+VF+ ++ + + +L+S F +N+ + + + F +
Sbjct: 181 LSSLVDMYGHVAAPGDARKVFEEMRAPDGICYTSLISAFVRNDWFEEAVRWFRSMLMMNG 240
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
++PD TF ++ A G G H GL G+V V ++ + MY KC + E
Sbjct: 241 VRPDGCTFGSMMTALGNSKRGSQGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGLMVEAR 300
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F+ M RN VS +++ G+ +NG E L + M E+G D ++ TVL
Sbjct: 301 KVFDRMQVRNEVSRCALLGGYCQNG-EYEKVIALFREMDKEDG---DWYSLGTVL 351
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA-FVEEMVKLFEVMPERNLVSWNSIICG 275
G G G AA+ GL+ D +++NAL+A Y + + ++ F+ +P R++V+ +SI+
Sbjct: 55 GLGFSFKGRAARAGLLADRYLANALLAFYVRLPRHLPHALRAFDDLPRRDVVAHSSILAA 114
Query: 276 FSENGFSCESFDLLIKMM-GCEEGFIPDV 303
F G + L M+ G ++ P+
Sbjct: 115 FLRAGMPRRALASLRDMLAGADDDVSPNA 143
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 112/210 (53%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L ACG + GK++H V T ++ + + L+ MYS C + VF +
Sbjct: 274 GSVLTACGSLLALGEGKQIHAYV-IRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMP 332
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+N+ W A++ G+ +N + + IF E+ + ++PD+FT VI +C +A + G+
Sbjct: 333 QKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNG-VEPDDFTLGSVISSCANLASLEEGA 391
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H A GLI + VSNALI +YGKC E +LF M R+ VSW +++ G+++ G
Sbjct: 392 QFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFG 451
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ L +M+ G PD +T + VL
Sbjct: 452 KANETIGLFERMLA--HGLKPDGVTFIGVL 479
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 98/180 (54%), Gaps = 4/180 (2%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
N + NT +IT CG +S+R+F LK R+ W +++G +N L + L +F E+
Sbjct: 203 NVVMCNT-MITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREM 261
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
D FTF V+ ACG + +G G +H + +VFV +AL+ MY KC
Sbjct: 262 RL-AGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRS 320
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +F+ MP++N++SW +++ G+ +NGFS E+ + +M G PD T+ +V+
Sbjct: 321 IKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQ--RNGVEPDDFTLGSVI 378
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
N F NT ++++YS G +++F+ + R+ WN +SG+ +D + ++ +
Sbjct: 70 NLFSWNT-ILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLM 128
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
D + + TF ++ C V G ++G K G DVFV + L+ MY K
Sbjct: 129 LKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGL 188
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
+ + + F+ MPERN+V N++I G G ES
Sbjct: 189 IYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEES 223
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 10/178 (5%)
Query: 101 GVLLQACGHEKDIEIGKRVH--ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
G ++ +C + +E G + H LVS F ++ LIT+Y CG +S R+F
Sbjct: 375 GSVISSCANLASLEEGAQFHCRALVSGLISF---ITVSNALITLYGKCGSTENSHRLFTE 431
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADV 216
+ R+ W AL++G+ + + + +F + + LKPD TF V+ AC G+ +
Sbjct: 432 MNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHG-LKPDGVTFIGVLSACSRAGLVEK 490
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
G M + G++ V +I + G+ +EE MP ++V W +++
Sbjct: 491 GL-QYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLL 547
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 114/205 (55%), Gaps = 6/205 (2%)
Query: 107 CGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
CG +D+ +G +VH +L+ F D + + L+ M+ CG L +R+VFD L+ RN+
Sbjct: 237 CGQIRDLGLGLQVHAQLLKGGLTF--DVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVV 294
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
W +L++ + +N + + L++ + + + + FTF ++ A G+A + G +H
Sbjct: 295 VWTSLMTAYLQNGEFEETLNLLSCMDREGTM-SNEFTFAVLLNAFAGMAALRHGDLLHAR 353
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
K+G+ V V NALI MY KC ++ +F M R++++WN++ICG+S++G ++
Sbjct: 354 VEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQA 413
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
L M+ E P+ +T V VL
Sbjct: 414 LLLFQDMLSAGE--CPNHVTFVGVL 436
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 111 KDIEIGKRVHELVSASTQFSN-------DFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
K++ GK +H + Q S + I LI +Y C +R +FD + R+
Sbjct: 26 KNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRS 85
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ +N L+ G+ + + +V+ +F + S +P+ + F V+ AC V G H
Sbjct: 86 VVSYNVLMGGYLHSGEHLEVVKLFKNMVSSL-YQPNEYVFTTVLSACAHSGRVFEGMQCH 144
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE-----VMPERNLVSWNSIICGFSE 278
G K GL+ FV ++L+ MY KC V+ +++ E + + + +NS++ E
Sbjct: 145 GFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVE 204
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+G E+ ++L +M+ +EG + D +T V+V+
Sbjct: 205 SGRLGEAVEVLGRMV--DEGVVWDSVTYVSVM 234
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 97/193 (50%), Gaps = 9/193 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLD-SRRVFDSLK- 160
+L AC H + G + H + + F+ + L+ MYS C F +D + +V +S
Sbjct: 127 VLSACAHSGRVFEGMQCHGFLFKFGLVFHHFV-KSSLVHMYSKC-FHVDLALQVLESEHG 184
Query: 161 ----TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
+ F +N++++ ++ + + + + D + D+ T+ V+ CG I D+
Sbjct: 185 NIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMV-DEGVVWDSVTYVSVMGLCGQIRDL 243
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G G VH K GL DVFV + L+ M+GKC V K+F+ + RN+V W S++ +
Sbjct: 244 GLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAY 303
Query: 277 SENGFSCESFDLL 289
+NG E+ +LL
Sbjct: 304 LQNGEFEETLNLL 316
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + GK +HE + S SN + N L+ MY CG ++++ VF+ + R
Sbjct: 437 LLSACANSSAYADGKMIHEDILRSGIKSNGHLANA-LMNMYRRCGSLMEAQNVFEGTQAR 495
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN++++G ++ Y +F E+ ++ EL+PDN TF V+ C + G +
Sbjct: 496 DVISWNSMIAGHAQHGSYETAYKLFQEMQNE-ELEPDNITFASVLSGCKNPEALELGKQI 554
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + GL DV + NALI MY +C +++ +F + R+++SW ++I G ++ G
Sbjct: 555 HGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGED 614
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L +M EGF P T ++L
Sbjct: 615 MKAIELFWQMQ--NEGFRPVKSTFSSIL 640
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC K +E GK +H +S S+D I LI+MY+ CG +R +F ++ R
Sbjct: 336 ILNACSTSKALEAGKLIHSHISEDGH-SSDVQIGNALISMYARCGDLPKARELFYTMPKR 394
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WNA+++G+ + E + + ++ ++ S+ +KP TF ++ AC + G +
Sbjct: 395 DLISWNAIIAGYARREDRGEAMRLYKQMQSEG-VKPGRVTFLHLLSACANSSAYADGKMI 453
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G+ + ++NAL+ MY +C + E +FE R+++SWNS+I G +++G
Sbjct: 454 HEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSY 513
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M E PD IT +VL
Sbjct: 514 ETAYKLFQEMQ--NEELEPDNITFASVL 539
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C ++ GK+V + ++ + D + LI+ YS G D+R VFD + +R
Sbjct: 639 ILKVCTSSACLDEGKKVIAYI-LNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSR 697
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN +++G+ +N L + ++ + ++ P+ F+F ++ AC + + G V
Sbjct: 698 DIVSWNKIIAGYAQNGLGQTAVEFAYQMQ-EQDVVPNKFSFVSLLNACSSFSALEEGKRV 756
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K L GDV V ALI+MY KC E ++F+ + E+N+V+WN++I ++++G +
Sbjct: 757 HAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLA 816
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ M +EG PD T ++L
Sbjct: 817 SKALGFFNCME--KEGIKPDGSTFTSIL 842
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 106/210 (50%), Gaps = 6/210 (2%)
Query: 102 VLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
LLQ C ++ + KR+H ++V A D ++ LI MY C LD+ +VF +
Sbjct: 32 ALLQNCTRKRLLPEAKRIHAQMVEA--WVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMP 89
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ WN+L+S + + +F E+ + P+ T+ ++ AC A++ G
Sbjct: 90 RRDVISWNSLISCYAQQGFKKKAFQLFEEMQ-NAGFIPNKITYISILTACYSPAELENGK 148
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H K G D V N+L++MYGKC + ++F + R++VS+N+++ +++
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E L +M EG PD +T + +L
Sbjct: 209 YVKECLGLFGQM--SSEGISPDKVTYINLL 236
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
++ GKR+H+L + ++D + T L+TM CG +++ F R++ +NAL++
Sbjct: 245 LDEGKRIHKL-TVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIA 303
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
++ + + + SD + + T+ ++ AC + G +H ++ G
Sbjct: 304 ALAQHGHNVEAFEQYYRMRSDG-VALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHS 362
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
DV + NALI+MY +C + + +LF MP+R+L+SWN+II G++ E+ L +M
Sbjct: 363 SDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQM 422
Query: 293 MGCEEGFIPDVITVVTVL 310
EG P +T + +L
Sbjct: 423 Q--SEGVKPGRVTFLHLL 438
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 110/209 (52%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L AC ++E GK++H +++ A Q D + L++MY CG +R+VF +
Sbjct: 134 ILTACYSPAELENGKKIHSQIIKAGYQ--RDPRVQNSLLSMYGKCGDLPRARQVFAGISP 191
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ +N ++ + + + L +F ++SS+ + PD T+ ++ A + + G
Sbjct: 192 RDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEG-ISPDKVTYINLLDAFTTPSMLDEGKR 250
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H + + GL D+ V AL+ M +C V+ + F+ +R++V +N++I +++G
Sbjct: 251 IHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGH 310
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+F+ +M +G + T +++L
Sbjct: 311 NVEAFEQYYRMR--SDGVALNRTTYLSIL 337
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL AC +E GKRVH E+V Q D + LI+MY+ CG +++ VFD++
Sbjct: 740 LLNACSSFSALEEGKRVHAEIVKRKLQ--GDVRVGAALISMYAKCGSQGEAQEVFDNIIE 797
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N+ WNA+++ + ++ L + L F + + +KPD TF ++ AC V G
Sbjct: 798 KNVVTWNAMINAYAQHGLASKALGFFNCMEKEG-IKPDGSTFTSILSACNHAGLVLEGYQ 856
Query: 222 V-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ M ++ G++ + L+ + G+ +E L MP
Sbjct: 857 IFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMP 898
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 112/205 (54%), Gaps = 4/205 (1%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC +E G+++H + S+ ++N LI +Y C L +RR+FDS++ RNL
Sbjct: 247 ACSGLGFVEGGRQIHGYAYRTAAESDASVVNA-LIDLYCKCSRLLLARRLFDSMENRNLV 305
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
W +++G+ +N L T+ +S+F +LS +PD F ++ +CG +A + G VH
Sbjct: 306 SWTTMIAGYMQNSLDTEAMSMFWQLS-QAGWQPDVFACTSILNSCGSLAAIWQGRQVHAH 364
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
K L D +V NALI MY KC + E +FE + E + +S+N++I G++ G +
Sbjct: 365 VIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGA 424
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
++ KM C P ++T V++L
Sbjct: 425 VEIFGKMRYCS--LKPSLLTFVSLL 447
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+AC + G++VH V+A + + T L+ +Y+ G + VFD+L RN
Sbjct: 144 LRACAQSRAARFGEQVHG-VAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARN 202
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
W A+++G+++ L +F + D ++PD F AC G+ V G +H
Sbjct: 203 PVTWTAVITGYSQAGQAGVALELFGRMGLDG-VRPDRFVLASAASACSGLGFVEGGRQIH 261
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G A + D V NALI +Y KC+ + +LF+ M RNLVSW ++I G+ +N
Sbjct: 262 GYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDT 321
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + ++ + G+ PDV ++L
Sbjct: 322 EAMSMFWQL--SQAGWQPDVFACTSIL 346
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 108/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL D+E+ K++H L+ S S D + LI +YS D++ VF ++ R
Sbjct: 446 LLGVSSSRSDLELSKQIHGLIVKSGT-SLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNR 504
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA++ G +NE + + +F L + L P+ FTF ++ +A + G
Sbjct: 505 DMVIWNAMIFGLAQNERGEEAVKLFARLRV-SGLTPNEFTFVALVTVASTLASIFHGQQF 563
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G D +SNALI MY KC F+EE LFE ++++ WNS+I ++++G +
Sbjct: 564 HAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHA 623
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + M G G P+ +T V+VL
Sbjct: 624 EEALHVFGMMEGA--GVEPNYVTFVSVL 649
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 7/176 (3%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + L+ YS G D+RR+FDS+ +RNL W + +S + ++ D L +F
Sbjct: 64 DLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGREDDALLLFAAFP 123
Query: 192 SDTELKPDN-----FTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
S PD F ++AC FG VHG+AAK+GL +VFV AL+ +Y
Sbjct: 124 SAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYA 183
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
K ++ + +F+ +P RN V+W ++I G+S+ G + + +L +M +G PD
Sbjct: 184 KAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRM--GLDGVRPD 237
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 107/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +CG I G++VH V + S++++ N LI MY+ C ++R VF++L
Sbjct: 345 ILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNA-LIDMYAKCEHLTEARAVFEALAED 403
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ +NA++ G+ + T + IF ++ LKP TF ++ +D+ +
Sbjct: 404 DAISYNAMIEGYARLGDLTGAVEIFGKMRY-CSLKPSLLTFVSLLGVSSSRSDLELSKQI 462
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ K G D++ +ALI +Y K + V++ +F +M R++V WN++I G ++N
Sbjct: 463 HGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERG 522
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L ++ G P+ T V ++
Sbjct: 523 EEAVKLFARLR--VSGLTPNEFTFVALV 548
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H A GL+ D+F++N L+ Y K + + +LF+ MP RNLVSW S I ++++G
Sbjct: 52 AHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHG 110
>gi|334184678|ref|NP_180987.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546770|sp|O64705.2|PP184_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g34400
gi|330253874|gb|AEC08968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 113/208 (54%), Gaps = 7/208 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC H D+ G+ + E+ + + + + ++LI+MY CG +RRVF+ + +
Sbjct: 239 MLGACSHLGDLRTGRLLEEM-AITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKK 297
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W A+++ +++N ++ +F E+ T + PD T V+ ACG + + G +
Sbjct: 298 DRVAWTAMITVYSQNGKSSEAFKLFFEMEK-TGVSPDAGTLSTVLSACGSVGALELGKQI 356
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
A+++ L +++V+ L+ MYGKC VEE +++FE MP +N +WN++I ++ G +
Sbjct: 357 ETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHA 416
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M P IT + VL
Sbjct: 417 KEALLLFDRM-----SVPPSDITFIGVL 439
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 113/207 (54%), Gaps = 8/207 (3%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC ++I +G+ VH + D IN LI MY+ CG +R++FD + R+
Sbjct: 141 ACAKLEEIGVGRSVHSSL-FKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTV 199
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
WN+++SG+++ D + +F ++ + +PD T ++ AC + D+ G + M
Sbjct: 200 SWNSMISGYSEAGYAKDAMDLFRKMEEEG-FEPDERTLVSMLGACSHLGDLRTGRLLEEM 258
Query: 226 A--AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
A K+GL F+ + LI+MYGKC ++ ++F M +++ V+W ++I +S+NG S
Sbjct: 259 AITKKIGL--STFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSS 316
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F L +M + G PD T+ TVL
Sbjct: 317 EAFKLFFEME--KTGVSPDAGTLSTVL 341
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 92/157 (58%), Gaps = 4/157 (2%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKN-ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
+F + N + +N ++ G T + LS++ + + LKPD FT+ V AC +
Sbjct: 87 LFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKF-SGLKPDKFTYNFVFIACAKL 145
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
++G G VH K+GL DV ++++LI MY KC V KLF+ + ER+ VSWNS+I
Sbjct: 146 EEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMI 205
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G+SE G++ ++ DL KM EEGF PD T+V++L
Sbjct: 206 SGYSEAGYAKDAMDLFRKME--EEGFEPDERTLVSML 240
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 110/201 (54%), Gaps = 4/201 (1%)
Query: 111 KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNAL 170
KD++ +++H + S N F+ N+ L+ Y CG D++++F +N+ W L
Sbjct: 35 KDLKPLQQIHAQIITSGLTHNTFLSNS-LMNAYVYCGLLADAKQIFHHTPCKNVVSWTIL 93
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
+SG KN+ + + + +F E++ KP+ T V+ A + + VH + G
Sbjct: 94 ISGLAKNDCFVEAIDVFREMTMGN-FKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGG 152
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
G+VFV AL+ MY K + +LFE M ERN+VSWN+I+ G+S++GFS E+ DL
Sbjct: 153 FEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFN 212
Query: 291 KMMGCEEGFIPDVITVVTVLP 311
M +G + D T+++++P
Sbjct: 213 LMR--RKGLLVDFYTIMSLIP 231
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 3/198 (1%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+++G +H + T + ND I T L+ +Y D+ RVF + +++ W +++
Sbjct: 239 LQVGTGIHGFI-IRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLT 297
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
GF+ + + F ++ LK D+ ++ +C + G VH +A K
Sbjct: 298 GFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFA 357
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
++FV +A+I MY C +E+ + F M E+++V WN++I G NG+ ++ DL ++M
Sbjct: 358 NNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQM 417
Query: 293 MGCEEGFIPDVITVVTVL 310
G G PD T V+VL
Sbjct: 418 KG--SGLDPDESTFVSVL 433
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 2/184 (1%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
I I K VH F + + T L+ MYS G +R++F+S+ RN+ WNA+VS
Sbjct: 138 IRIAKSVH-CFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVS 196
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G++ + + + +F L L D +T +I A + + G+G+HG + G
Sbjct: 197 GYSDHGFSEEAIDLF-NLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYE 255
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
D + AL+ +Y V++ ++F M +++ +W ++ GFS + KM
Sbjct: 256 NDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKM 315
Query: 293 MGCE 296
+G +
Sbjct: 316 LGIQ 319
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +C H ++ G+RVH L + T F+N+ + + +I MY+ CG D++R F + +
Sbjct: 331 ILSSCSHSGALQQGRRVHAL-AIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEK 389
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
++ WNA+++G N TD + +F+++ + L PD TF V+ AC
Sbjct: 390 DVVCWNAMIAGNGMNGYGTDAIDLFLQMKG-SGLDPDESTFVSVLYAC 436
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 132/265 (49%), Gaps = 37/265 (13%)
Query: 80 LNKALSLLQENLHNADLK--EATGV-LLQACGHEKDIEIGKRVHE--------------- 121
L++A++L L ++D+K E T + LL AC + D E+GK +HE
Sbjct: 234 LDEAIALFNSML-SSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLN 292
Query: 122 -----------LVSASTQFSN----DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQ 166
L +A F+N D T L+ Y+ G +R++FD + RN+
Sbjct: 293 AMLDMYVKCGCLTTAREIFNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVS 352
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH-GM 225
WNA+++G+++N + L +F + L P T CV+ A G + + G +H
Sbjct: 353 WNAMIAGYSQNSQPMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNH 412
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
K+G+ + + NA++ MY KC ++ KLF MPE+NLVSWNS+I ++ G + ++
Sbjct: 413 VNKIGIQVSLILKNAVMDMYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKA 472
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
L +M+G G PD IT + VL
Sbjct: 473 LTLFDQMIG--SGLKPDHITFIGVL 495
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 11/224 (4%)
Query: 90 NLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC--G 147
+L N + T ++LQ+C + K++ ++ T N +RL+ +L G
Sbjct: 45 SLSNVFISNPTLLILQSCSSMFQL---KQIQAHITC-TGLMNQIFPASRLLAFCALSDSG 100
Query: 148 FPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL-SSDTELKPDNFTFPCV 206
+ +FD + N F WN ++ G+ K + S F ++ + E +F F
Sbjct: 101 DIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVF--A 158
Query: 207 IKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNL 266
+KACG A+ G VH + K G D+FV N LI Y + + ++F+ +++
Sbjct: 159 LKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDV 218
Query: 267 VSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
V+W ++I G++ N + E+ L M+ + P+ +T++ +L
Sbjct: 219 VTWTTMINGYARNNWLDEAIALFNSMLSSD--VKPNEVTMIALL 260
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L A G +E+G+ +H I+ ++ MY+ CG + ++F S+ +
Sbjct: 392 VLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYAKCGSIDAAAKLFHSMPEK 451
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVG 217
NL WN+++S + L++F ++ + LKPD+ TF V+ AC GG G
Sbjct: 452 NLVSWNSMISAYASYGHAKKALTLFDQMIG-SGLKPDHITFIGVLSACSYGGFVSEG 507
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 113/209 (54%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + GK +HE + S SN + N L+ MY CG ++++ VF+ + R
Sbjct: 437 LLSACANSSAYADGKMIHEDILRSGIKSNGHLANA-LMNMYRRCGSLMEAQNVFEGTQAR 495
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN++++G ++ Y +F E+ ++ EL+PDN TF V+ C + G +
Sbjct: 496 DVISWNSMIAGHAQHGSYETAYKLFQEMQNE-ELEPDNITFASVLSGCKNPEALELGKQI 554
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + GL DV + NALI MY +C +++ +F + R+++SW ++I G ++ G
Sbjct: 555 HGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGED 614
Query: 283 CESFDLLIKMMGCEEGFI-PDVITVVTVL 310
++ +L +M EGF PD T ++L
Sbjct: 615 MKAIELFWQMQ--NEGFRPPDGSTFTSIL 641
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC K +E GK +H +S S+D I LI+MY+ CG +R +F ++ R
Sbjct: 336 ILNACSTSKALEAGKLIHSHISEDGH-SSDVQIGNALISMYARCGDLPKARELFYTMPKR 394
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WNA+++G+ + E + + ++ ++ S+ +KP TF ++ AC + G +
Sbjct: 395 DLISWNAIIAGYARREDRGEAMRLYKQMQSEG-VKPGRVTFLHLLSACANSSAYADGKMI 453
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G+ + ++NAL+ MY +C + E +FE R+++SWNS+I G +++G
Sbjct: 454 HEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSY 513
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M E PD IT +VL
Sbjct: 514 ETAYKLFQEMQ--NEELEPDNITFASVL 539
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 106/210 (50%), Gaps = 6/210 (2%)
Query: 102 VLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
LLQ C ++ + KR+H ++V A D ++ LI MY C LD+ +VF +
Sbjct: 32 ALLQNCTRKRLLPEAKRIHAQMVEAGV--GPDIFLSNLLINMYVKCRSVLDAHQVFKEMP 89
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ WN+L+S + + +F E+ + P+ T+ ++ AC A++ G
Sbjct: 90 RRDVISWNSLISCYAQQGFKKKAFQLFEEMQ-NAGFIPNKITYISILTACYSPAELENGK 148
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H K G D V N+L++MYGKC + ++F + R++VS+N+++ +++
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E L +M EG PD +T + +L
Sbjct: 209 YVKECLGLFGQM--SSEGISPDKVTYINLL 236
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 103/198 (52%), Gaps = 4/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
++ GKR+H+L + ++D + T L+TM CG +++ F + R++ +NAL++
Sbjct: 245 LDEGKRIHKL-TVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIA 303
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
++ + + + SD + + T+ ++ AC + G +H ++ G
Sbjct: 304 ALAQHGHNVEAFEQYYRMRSDG-VALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHS 362
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
DV + NALI+MY +C + + +LF MP+R+L+SWN+II G++ E+ L +M
Sbjct: 363 SDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQM 422
Query: 293 MGCEEGFIPDVITVVTVL 310
EG P +T + +L
Sbjct: 423 Q--SEGVKPGRVTFLHLL 438
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 111/209 (53%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L AC ++E GK++H +++ A Q D + L++MY CG +R+VF +
Sbjct: 134 ILTACYSPAELENGKKIHSQIIKAGYQ--RDPRVQNSLLSMYGKCGDLPRARQVFAGISP 191
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ +N ++ + + + L +F ++SS+ + PD T+ ++ A + + G
Sbjct: 192 RDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEG-ISPDKVTYINLLDAFTTPSMLDEGKR 250
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H + + GL D+ V AL+ M +C V+ + F+ + +R++V +N++I +++G
Sbjct: 251 IHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGH 310
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+F+ +M +G + T +++L
Sbjct: 311 NVEAFEQYYRMR--SDGVALNRTTYLSIL 337
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 72/125 (57%), Gaps = 5/125 (4%)
Query: 189 ELSSDTELKP---DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
++S+ + +P D T+ +++ C + +H + G+ D+F+SN LI MY
Sbjct: 13 DVSNTHQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMY 72
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
KC V + ++F+ MP R+++SWNS+I +++ GF ++F L +M GFIP+ IT
Sbjct: 73 VKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNA--GFIPNKIT 130
Query: 306 VVTVL 310
+++L
Sbjct: 131 YISIL 135
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 6/188 (3%)
Query: 79 SLNKALSLLQENLHNADLKEAT---GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
S A L QE + N +L+ +L C + + +E+GK++H ++ S D +
Sbjct: 512 SYETAYKLFQE-MQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESG-LQLDVNL 569
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
LI MY CG D+R VF SL+ R++ W A++ G + +F ++ ++
Sbjct: 570 GNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGF 629
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
PD TF ++ AC V G + M ++ G++ + L+ + G+ +E
Sbjct: 630 RPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEA 689
Query: 255 VKLFEVMP 262
L MP
Sbjct: 690 ETLINQMP 697
>gi|255571614|ref|XP_002526753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533942|gb|EEF35667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 818
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 111/214 (51%), Gaps = 6/214 (2%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
+ LL C + K I G+RVH + T + + TRLI Y+ C +D+R VFD
Sbjct: 476 DGYNTLLNECVNNKAIREGQRVHAHI-IKTYYLPSVYLRTRLIVFYTKCDLLMDARHVFD 534
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVE-LSSDTELKPDNFTFPCVIKACGGIADV 216
+ RN+ W A++SG+++ + L +FV L SD E P+ FT V+ +C +
Sbjct: 535 EMSERNVVSWTAMISGYSRRGFAFETLHLFVRMLRSDIE--PNEFTLATVLTSCTDASGS 592
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G +H + K +FV ++L+ MY K + E +FE +PER++VS +II G+
Sbjct: 593 ELGRQIHSLIIKCNYDSHIFVGSSLLDMYAKAGRILEARMVFESLPERDVVSCTAIISGY 652
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ G E+ +L ++ EG + +T +VL
Sbjct: 653 AQLGLDEEALELFRRLE--REGLSSNCVTYASVL 684
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 139/273 (50%), Gaps = 19/273 (6%)
Query: 41 RSIFKEKSS---LSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLK 97
R +F E S +S +A + S +G F ++L+ + +L+ ++ +
Sbjct: 530 RHVFDEMSERNVVSWTAMISGYSRRGFAF-----------ETLHLFVRMLRSDIEPNEFT 578
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
AT +L +C E+G+++H L+ + + + + L+ MY+ G L++R VF+
Sbjct: 579 LAT--VLTSCTDASGSELGRQIHSLI-IKCNYDSHIFVGSSLLDMYAKAGRILEARMVFE 635
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
SL R++ A++SG+ + L + L +F L + L + T+ V+ + G+A +
Sbjct: 636 SLPERDVVSCTAIISGYAQLGLDEEALELFRRLEREG-LSSNCVTYASVLTSLSGLAALD 694
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G VH + L V + N++I MY KC + ++F+ MPER ++SWN+++ G+
Sbjct: 695 HGKQVHSHVLRRELPFYVVLQNSMIDMYSKCGSLNYARRIFDSMPERTVISWNAMLVGYG 754
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++G E +L K+M E PD +T++ VL
Sbjct: 755 KHGMGREVVELF-KLMRTENKVKPDSVTILAVL 786
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
++ GK+VH V + ++ +I MYS CG +RR+FDS+ R + WNA++
Sbjct: 693 LDHGKQVHSHV-LRRELPFYVVLQNSMIDMYSKCGSLNYARRIFDSMPERTVISWNAMLV 751
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGF 218
G+ K+ + +V+ +F + ++ ++KPD+ T V+ C GG D G
Sbjct: 752 GYGKHGMGREVVELFKLMRTENKVKPDSVTILAVLSGCSHGGFEDKGL 799
>gi|242053821|ref|XP_002456056.1| hypothetical protein SORBIDRAFT_03g029620 [Sorghum bicolor]
gi|241928031|gb|EES01176.1| hypothetical protein SORBIDRAFT_03g029620 [Sorghum bicolor]
Length = 592
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 101/183 (55%), Gaps = 3/183 (1%)
Query: 123 VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTD 182
++A T F+ D + + ++ MY+ CG D+RR+FD + RN+ W+AL+ G+ ++
Sbjct: 145 LAAKTPFAGDVFVGSAILDMYAKCGHLADARRLFDEMPERNVVSWSALICGYADAGMHPA 204
Query: 183 VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALI 242
+ IF L+ + + ++FT +I+ C G+ VH A K L FV ++L+
Sbjct: 205 AMGIF-RLALEEAVPVNDFTVSSIIRVCAAATLFELGAQVHARATKTALDASPFVGSSLV 263
Query: 243 AMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
++Y KC VE ++F PE+NL WN+++ +++G + +F+ ++M GF P+
Sbjct: 264 SVYSKCGLVECAYRVFNEAPEKNLGIWNAVLIASAQHGHTAAAFERFMEMQNA--GFRPN 321
Query: 303 VIT 305
IT
Sbjct: 322 HIT 324
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSAS---TQFSNDFIINTRLITMYSLCGFPLDSRRVF-D 157
LL A + + G+++H L+ A S+ ++ L+T Y+ C P S R F D
Sbjct: 15 LLVALSAARALPKGQQLHGHLLKAGHVPATASSHTLLGHHLLTFYARCALPDLSLRAFLD 74
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG---IA 214
+ W++L+S F +N L F + + D P KA ++
Sbjct: 75 LPAPPSPAAWSSLISSFAQNGLAAAAFDTFRRMLAAGVPATDR-NIPSAAKAVAAAETLS 133
Query: 215 DVGFGS-GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
F +HG+AAK GDVFV +A++ MY KC + + +LF+ MPERN+VSW+++I
Sbjct: 134 RPPFAPHALHGLAAKTPFAGDVFVGSAILDMYAKCGHLADARRLFDEMPERNVVSWSALI 193
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
CG+++ G + + + EE + TV +++
Sbjct: 194 CGYADAGMHPAAMGIF--RLALEEAVPVNDFTVSSII 228
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 75/160 (46%), Gaps = 2/160 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++ C E+G +VH + + ++ F+ + L+++YS CG + RVF+ +
Sbjct: 227 IIRVCAAATLFELGAQVHARATKTALDASPFV-GSSLVSVYSKCGLVECAYRVFNEAPEK 285
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL WNA++ ++ F+E+ + +P++ TF C++ AC V G
Sbjct: 286 NLGIWNAVLIASAQHGHTAAAFERFMEMQ-NAGFRPNHITFLCLVTACSHAGLVDEGKRY 344
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ G+ +++ + G+ ++E + L E MP
Sbjct: 345 FSLMKDYGIEPQAEHYASMVDLLGRVGRIKEALDLIESMP 384
>gi|3128231|gb|AAC26711.1| hypothetical protein [Arabidopsis thaliana]
gi|20197159|gb|AAM14947.1| hypothetical protein [Arabidopsis thaliana]
Length = 617
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 113/208 (54%), Gaps = 7/208 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC H D+ G+ + E+ + + + + ++LI+MY CG +RRVF+ + +
Sbjct: 235 MLGACSHLGDLRTGRLLEEM-AITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKK 293
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W A+++ +++N ++ +F E+ T + PD T V+ ACG + + G +
Sbjct: 294 DRVAWTAMITVYSQNGKSSEAFKLFFEMEK-TGVSPDAGTLSTVLSACGSVGALELGKQI 352
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
A+++ L +++V+ L+ MYGKC VEE +++FE MP +N +WN++I ++ G +
Sbjct: 353 ETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHA 412
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M P IT + VL
Sbjct: 413 KEALLLFDRM-----SVPPSDITFIGVL 435
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 113/207 (54%), Gaps = 8/207 (3%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC ++I +G+ VH + D IN LI MY+ CG +R++FD + R+
Sbjct: 137 ACAKLEEIGVGRSVHSSL-FKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTV 195
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
WN+++SG+++ D + +F ++ + +PD T ++ AC + D+ G + M
Sbjct: 196 SWNSMISGYSEAGYAKDAMDLFRKMEEEG-FEPDERTLVSMLGACSHLGDLRTGRLLEEM 254
Query: 226 A--AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
A K+GL F+ + LI+MYGKC ++ ++F M +++ V+W ++I +S+NG S
Sbjct: 255 AITKKIGL--STFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSS 312
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F L +M + G PD T+ TVL
Sbjct: 313 EAFKLFFEME--KTGVSPDAGTLSTVL 337
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 92/157 (58%), Gaps = 4/157 (2%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKN-ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
+F + N + +N ++ G T + LS++ + + LKPD FT+ V AC +
Sbjct: 83 LFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKF-SGLKPDKFTYNFVFIACAKL 141
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
++G G VH K+GL DV ++++LI MY KC V KLF+ + ER+ VSWNS+I
Sbjct: 142 EEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMI 201
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G+SE G++ ++ DL KM EEGF PD T+V++L
Sbjct: 202 SGYSEAGYAKDAMDLFRKME--EEGFEPDERTLVSML 236
>gi|326511827|dbj|BAJ92058.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 581
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 121/232 (52%), Gaps = 5/232 (2%)
Query: 81 NKALSLLQENLHNADLKEATGVL--LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
NKAL + + + +L L AC +++GK H L+ + F + + +
Sbjct: 178 NKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALL-VTNGFEINCYMGSS 236
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI+MY+ CG D+RR+FD + RN W +++SG+T+ + + +F ++ +K
Sbjct: 237 LISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQI-AGVKV 295
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D+ T V+ +CG + + G VH GL D+ V N+LI MY KC +++ +F
Sbjct: 296 DDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDIF 355
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
M +R+ SW II GF+ NG S E+ DL +M E G +P+ IT + VL
Sbjct: 356 CGMVKRDNFSWTVIIMGFAANGLSGEALDLFAQMEE-EGGVMPNEITFLGVL 406
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 4/182 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK--TRNLFQWNAL 170
+ +G ++H L S+ F++NT LI MYS C +P +R V DS + WN +
Sbjct: 109 VVVGAQLHALSVKLGLSSDTFVLNT-LINMYSSCSYPSTARSVLDSAPKGASDTVSWNTI 167
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
++G+ L L F +++ ++ D+ T + AC + G H + G
Sbjct: 168 IAGYIHAGLPNKALQAFSQMAKG-QVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNG 226
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
+ ++ ++LI+MY KC VE+ ++F+ MP+RN V W S+I G+++ G S E+ L
Sbjct: 227 FEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFR 286
Query: 291 KM 292
M
Sbjct: 287 DM 288
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 81/174 (46%), Gaps = 5/174 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ +CG +++G+ VH D + LI MYS CG + +F + R
Sbjct: 303 VVSSCGQMGALDLGRYVHAYCDIH-GLGKDISVKNSLIDMYSKCGDIKKAYDIFCGMVKR 361
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
+ F W ++ GF N L + L +F ++ + + P+ TF V+ +C GG+ + G+
Sbjct: 362 DNFSWTVIIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGLVEQGY-R 420
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
H M++ G+ + ++ + G+ + E + + MP + V W S++
Sbjct: 421 HFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMWRSLL 474
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
DN++ + + V G+ +H ++ K+GL D FV N LI MY C++ +
Sbjct: 92 DNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVL 151
Query: 259 EVMPE--RNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ P+ + VSWN+II G+ G ++ +M
Sbjct: 152 DSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQM 187
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 104/198 (52%), Gaps = 5/198 (2%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR-NLFQWNALVS 172
E+GK++H LV + D I L+ Y CG +F + R + WN+++S
Sbjct: 609 ELGKQIHALV-LKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMIS 667
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G+ NEL + + V + D FTF V+ AC +A + G VHG + + L
Sbjct: 668 GYIHNELLPKAMDM-VWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLE 726
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
D+ + +AL+ MY KC ++ + FE+MP RNL SWNS+I G++ +G +S DL +M
Sbjct: 727 SDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQM 786
Query: 293 MGCEEGFIPDVITVVTVL 310
+G +PD +T V VL
Sbjct: 787 K--LQGPLPDHVTFVGVL 802
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 111/203 (54%), Gaps = 8/203 (3%)
Query: 113 IEIGKR----VHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWN 168
+E GKR VH + S + I LI MY+ CG D+ VF + ++ WN
Sbjct: 400 LENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWN 459
Query: 169 ALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK 228
++++G +N+ + + + F E+ TEL P NFT + +C + + G +H K
Sbjct: 460 SMITGLDQNKQFLEAVKTFQEMRR-TELYPSNFTMISALSSCASLGWISVGEQLHCEGLK 518
Query: 229 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS-CESFD 287
+GL DV VSNAL+A+YG+C +V+E K F +M + + VSWNS+I +++ S E+ +
Sbjct: 519 LGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVE 578
Query: 288 LLIKMMGCEEGFIPDVITVVTVL 310
+ MM G+ P+ +T +T+L
Sbjct: 579 SFLVMM--RAGWDPNRVTFITIL 599
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 99/184 (53%), Gaps = 10/184 (5%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F ND + LI +Y+ G R+VFD + RNL W+ L+SG+T+N + + +F
Sbjct: 104 FVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELFR 163
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVG--FGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
++ SD P+++ F VI+AC + G FG +HG+ +K + DV SN LI+MYG
Sbjct: 164 KMVSDG-FMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYG 222
Query: 247 KC-AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM----MGCEEGFIP 301
V+ + F+ + RNLVS NS+I + + G + +FD+ M MG +G P
Sbjct: 223 NALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMG--DGLKP 280
Query: 302 DVIT 305
+ T
Sbjct: 281 NEYT 284
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 9/221 (4%)
Query: 99 ATGVLLQACGH--EKDIEIGKRVHELVSASTQFSNDFIINTRLITMY-SLCGFPLDSRRV 155
A G +++AC E ++ G ++H L+S TQ+ ND + LI+MY + G +RR
Sbjct: 176 AFGSVIRACQECGEYGLKFGMQIHGLMS-KTQYVNDVTASNVLISMYGNALGMVDYARRA 234
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT---ELKPDNFTFPCVIKACGG 212
FDS+ RNL N+++S + + IF + + LKP+ +TF +I A
Sbjct: 235 FDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCS 294
Query: 213 IADVGFG--SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
+A+ G + K G + D++V +AL++ + K + +F+ M RN+VS N
Sbjct: 295 LANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLN 354
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+I G E+ +L ++M E + ++T P
Sbjct: 355 GLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMIILTAFP 395
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 8/210 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L +C I +G+++H D ++ L+ +Y CG+ + ++ F + +
Sbjct: 497 LSSCASLGWISVGEQLH-CEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYD 555
Query: 164 LFQWNALVSGFTKNE--LYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
WN+L+ +E + V S V + + + P+ TF ++ A ++ G
Sbjct: 556 HVSWNSLIGALADSEPSMLEAVESFLVMMRAGWD--PNRVTFITILAAVSSLSLHELGKQ 613
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSENG 280
+H + K + D + NAL+A YGKC + +F M +R + VSWNS+I G+ N
Sbjct: 614 IHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNE 673
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ D++ MM ++G D T TVL
Sbjct: 674 LLPKAMDMVWFMM--QKGQRLDGFTFATVL 701
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 228 KMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFD 287
K G + D+F+ N LI +Y + + K+F+ MP RNLVSW+ +I G++ N E+ +
Sbjct: 101 KNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACE 160
Query: 288 LLIKMMGCEEGFIPDVITVVTVL 310
L KM+ +GF+P+ +V+
Sbjct: 161 LFRKMV--SDGFMPNHYAFGSVI 181
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 121/226 (53%), Gaps = 6/226 (2%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNA--DLKEATGV-LLQACGHEKDIEIGKRVHELVSAS 126
I +C++ + +AL +L N+ L+ +T V L+ AC + + ++ GKR+H+ + S
Sbjct: 51 INLMCKQ-QHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKS 109
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
D ++ ++ MY CG D+R+ FD+++ R++ W ++SG+++N D + +
Sbjct: 110 N-CQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIM 168
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
++++ PD TF +IKAC D+ G +HG K G + NALI+MY
Sbjct: 169 YIQMLRSGYF-PDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYT 227
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
K + +F ++ ++L+SW S+I GF++ G+ E+ L M
Sbjct: 228 KFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDM 273
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +++AC DI++G ++H V S + + I LI+MY+ G + VF +
Sbjct: 185 GSIIKACCIAGDIDLGGQLHGHVIKSG-YDHHLIAQNALISMYTKFGQIAHASDVFTMIS 243
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
T++L W ++++GFT+ + L +F ++ +P+ F F V AC + FG
Sbjct: 244 TKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGR 303
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+ GM AK GL +VF +L MY K F+ + F + +LVSWN+II + +
Sbjct: 304 QIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALANSD 363
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ +M+ G +PD IT + +L
Sbjct: 364 VN-EAIYFFCQMI--HMGLMPDDITFLNLL 390
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF-DSLKT 161
LL ACG + G ++H + + N+ L+TMY+ C D+ VF D +
Sbjct: 389 LLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNS-LLTMYTKCSNLHDAFNVFKDISEN 447
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
NL WNA++S ++++ + +F +L +E KPDN T ++ C + + G+
Sbjct: 448 GNLVSWNAILSACSQHKQPGEAFRLF-KLMLFSENKPDNITITTILGTCAELVSLEVGNQ 506
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH + K GL+ DV VSN LI MY KC ++ +F+ ++VSW+S+I G+++ G
Sbjct: 507 VHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGL 566
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L M G P+ +T + VL
Sbjct: 567 GQEALNLFRMMRNL--GVQPNEVTYLGVL 593
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 6/211 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G + AC E G+++ + A + L MY+ GF ++R F ++
Sbjct: 287 GSVFSACRSLLKPEFGRQIQGMC-AKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIE 345
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ +L WNA+++ +++ + + F ++ L PD+ TF ++ ACG + G
Sbjct: 346 SPDLVSWNAIIAALANSDV-NEAIYFFCQMIH-MGLMPDDITFLNLLCACGSPMTLNQGM 403
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSEN 279
+H KMGL V N+L+ MY KC+ + + +F+ + E NLVSWN+I+ S++
Sbjct: 404 QIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQH 463
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F L M+ E PD IT+ T+L
Sbjct: 464 KQPGEAFRLFKLMLFSENK--PDNITITTIL 492
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Query: 168 NALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAA 227
N+ ++ K + Y + L F ++ ++ + T+ +I AC + + +G +H
Sbjct: 48 NSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHIL 107
Query: 228 KMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFD 287
K D+ + N ++ MYGKC +++ K F+ M R++VSW +I G+S+NG ++
Sbjct: 108 KSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAII 167
Query: 288 LLIKMMGCEEGFIPDVITVVTVL 310
+ I+M+ G+ PD +T +++
Sbjct: 168 MYIQML--RSGYFPDQLTFGSII 188
>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 670
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 106/195 (54%), Gaps = 4/195 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G VH LV F++D + + LI Y D+R+VF+ + R++ W ++S F
Sbjct: 141 GDAVHALVQ-RIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFA 199
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+ + +VL E+ S+ KP+ T ++ ACG + V G V+ + G+ DV
Sbjct: 200 QCGQWDNVLRSLDEMQSEGT-KPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADV 258
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+ NALI MY KC + + K F+ MP RN SWN++I GF +NG E+ + +M+
Sbjct: 259 DIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEML-- 316
Query: 296 EEGFIPDVITVVTVL 310
+G IPDVIT+V+VL
Sbjct: 317 SDGVIPDVITLVSVL 331
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 2/174 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL ACG + ++ G V+ V D I LI MY CG D+ + F + R
Sbjct: 229 LLSACGQVRAVDKGLWVYARVD-EYGIEADVDIRNALIGMYVKCGCMSDAWKTFKGMPIR 287
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WN L+ GF +N + + L++F E+ SD + PD T V+ + D+ G +
Sbjct: 288 NTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVI-PDVITLVSVLSTYAQLGDLQQGRYL 346
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
H + D+ + N+LI MY KC + +FE M R++VSW +++CG+
Sbjct: 347 HNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMARRDIVSWTAMVCGY 400
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 111/231 (48%), Gaps = 5/231 (2%)
Query: 82 KALSLLQENLHNADLKEATGVL--LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
+AL++ +E L + + + ++ L D++ G+ +H + + D I+ L
Sbjct: 307 EALTMFEEMLSDGVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIK-DHEIHCDIILQNSL 365
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
I MY+ CG + +F+++ R++ W A+V G+ K + ++F ++ ++
Sbjct: 366 INMYAKCGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKV-RDVMAS 424
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
++ AC + + G +H + + D+++ +AL+ MY KC ++ ++F
Sbjct: 425 EMALVSLLSACSQLGALDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFS 484
Query: 260 VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
M + ++WN++I G + G E+ L +++ + PD IT+ VL
Sbjct: 485 RMRHKQTLAWNAMIGGLASQGQGKEAVALFEQLLKLRDP-KPDAITLKVVL 534
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 127 TQFSNDFIINTRLITM----YSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTD 182
+D + RL+T+ S P +R+VFD + WN ++ G+ D
Sbjct: 44 AHLGSDPCVAGRLVTLLASPVSRHDMPY-ARKVFDRMAQPTAIVWNCMIRGYNSCHAPMD 102
Query: 183 VLSIFVELSSDTELKPDNFTFPCVIKACGGIAD---VGFGSGVHGMAAKMGLIGDVFVSN 239
L +F + + + PDN+T V ++ A G VH + ++G D+FV +
Sbjct: 103 ALELFRAMRR-SGVSPDNYTMAAVAQSSAAFASWKGRATGDAVHALVQRIGFASDLFVMS 161
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG--CEE 297
LI YG VE+ K+FE M ER++VSW +I F++ C +D +++ + E
Sbjct: 162 GLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQ----CGQWDNVLRSLDEMQSE 217
Query: 298 GFIPDVITVVTVL 310
G P+ IT++++L
Sbjct: 218 GTKPNKITIISLL 230
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 77/172 (44%), Gaps = 2/172 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC ++ G+ +H + + D + + L+ MY+ CG + +F ++ +
Sbjct: 431 LLSACSQLGALDKGREIHSYIKEKS-VRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHK 489
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
WNA++ G + +++F +L + KPD T V+ AC + V G
Sbjct: 490 QTLAWNAMIGGLASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHY 549
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
+ +G++ D ++ + G+ ++E + MP + N V W S++
Sbjct: 550 FNLMLTLGIVPDNEHYGCIVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLL 601
>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 589
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 111/215 (51%), Gaps = 7/215 (3%)
Query: 96 LKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV 155
+ EA G LL C K G +H + T +D I++ +I +YS CG + +RR+
Sbjct: 2 IPEAIGSLLHHCAKIKAFLHGLSLHA-AALKTGMLSDIIVSNHVINLYSKCGNVIFARRM 60
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
FD + RNL W+A++SG+ + L++F S + P+ + F VI AC +
Sbjct: 61 FDEMSDRNLVSWSAIISGYDQTGQPLLALNLF----SQMRIVPNEYVFASVISACASLTA 116
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
+ G VH + K+G + FVSNALI+MY KC + + + VM E N VS+N++I G
Sbjct: 117 LSQGLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAG 176
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F EN + + M ++GF PD T +L
Sbjct: 177 FVENQQPEKGIEAFKVMR--QKGFAPDRFTFSGLL 209
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 108/209 (51%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL C D G ++H +++ + + S FI N +ITMYS ++ +VF +K
Sbjct: 208 LLGICTSYDDFWRGMQLHCQMIKLNLEDSA-FIGNV-IITMYSKFNLIEEAEKVFGLIKE 265
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++L WN LV+ + + L +F ++ +KPD+FTF V+ AC G+A + G
Sbjct: 266 KDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQ 325
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG + DV VSNAL+ MY KC ++ +F +RNLVSWN+II F +G
Sbjct: 326 IHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGL 385
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + KM G PD +T V +L
Sbjct: 386 GARALEHFEKMKTV--GIHPDSVTFVGLL 412
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 2/171 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC + G +VH S F+ N LI+MY CG D+ V + +
Sbjct: 107 VISACASLTALSQGLQVHAQSLKLGCVSVSFVSNA-LISMYMKCGLCTDALLVHNVMSEP 165
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N +NAL++GF +N+ + F ++ PD FTF ++ C D G +
Sbjct: 166 NAVSYNALIAGFVENQQPEKGIEAF-KVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQL 224
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
H K+ L F+ N +I MY K +EE K+F ++ E++L+SWN+++
Sbjct: 225 HCQMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLV 275
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 119/245 (48%), Gaps = 40/245 (16%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC G++VH V S +F D +++ L+ MY+ CG +R VFD + +R
Sbjct: 999 VMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASR 1058
Query: 163 -------------------------------NLFQWNALVSGFTKNELYTDVLSIFVELS 191
N+ WN L++ + +N + L +FV L
Sbjct: 1059 SVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLK 1118
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVH------GMAAKMGLIGDVFVSNALIAMY 245
++ + P ++T+ V+ ACG +AD+ G H G G DVFV N+L+ MY
Sbjct: 1119 RES-VWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMY 1177
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
K +++ K+FE M R+ VSWN++I G ++NG + ++ L +M+ +E PD +T
Sbjct: 1178 LKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKES--PDSVT 1235
Query: 306 VVTVL 310
++ VL
Sbjct: 1236 MIGVL 1240
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 112/239 (46%), Gaps = 36/239 (15%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC EKD G +VH LVS S + D I + L+ MY+ C +P ++RRVF+++ RN
Sbjct: 899 LSACAAEKDSRTGVQVHALVSKSPH-AKDVYIGSALLDMYAKCEWPEEARRVFEAMPERN 957
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN+L++ + +N + L +FV + PD T V+ AC G+A G VH
Sbjct: 958 IVSWNSLITCYEQNGPVGEALVLFVSMMK-AGFVPDEVTLASVMSACAGLAADREGRQVH 1016
Query: 224 GMAAKMGLIG-DVFVSNALIAMYGKC-------------------------------AFV 251
K D+ +SNAL+ MY KC A V
Sbjct: 1017 ARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANV 1076
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +F M E+N+++WN +I +++NG E+ L +++ E P T VL
Sbjct: 1077 EDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLK--RESVWPTHYTYGNVL 1133
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
N F N L++ ++ G P D+R +F ++ + +NA+++ ++ D L +
Sbjct: 825 NTFSYNA-LLSAHARLGRPADARALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAM 883
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
+D + + ++F + AC D G VH + +K DV++ +AL+ MY KC +
Sbjct: 884 HAD-DFVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEW 942
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
EE ++FE MPERN+VSWNS+I + +NG E+ L + MM + GF+PD +T+ +V+
Sbjct: 943 PEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMM--KAGFVPDEVTLASVM 1000
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 92/163 (56%), Gaps = 3/163 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D +++T +++ + CG D++RVF+ +K RNL WNA+++G+ ++ T L +F ++
Sbjct: 317 DMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMR 376
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+T + D T V+ AC GI D+G G VH A K G + NAL+ MY KC +
Sbjct: 377 QETR-EFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCL 435
Query: 252 E--EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
E + LFE+ ER+ SWNS+I G+ + S + L KM
Sbjct: 436 RSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKM 478
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 112/239 (46%), Gaps = 9/239 (3%)
Query: 76 ESKSLNKALSLLQENLHNADLKEAT--GVLLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
S L AL L Q+ +A G +L AC DI G+ VH FS+
Sbjct: 361 RSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPI 420
Query: 134 IINTRLITMYSLCGFPLDSRRV--FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ N L+ MYS CG + R+ F+ R+ + WN+L+SG+ ++ + L ++
Sbjct: 421 LKNA-LVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQ 479
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
S E+ P+ TF + AC I + G +H + G D + + LI MY KC
Sbjct: 480 S--EVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQF 537
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +++FE P R+++ WNS+I G + +G DL +M ++G D +T + L
Sbjct: 538 DYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQ--KQGIKADSVTFLGAL 594
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 81/161 (50%), Gaps = 2/161 (1%)
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
F+ N R I + CG D+R +FD + R+ WNA+++ ++ ++ LS+F ++S
Sbjct: 86 FLFN-RAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNS 144
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
++P + T V+ C D+ +HG AK +V + AL+ +YG C +
Sbjct: 145 -LGIRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLA 203
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
+ + F+ + E N +SWN I+ + G + D+ +M+
Sbjct: 204 DARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRML 244
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 107/241 (44%), Gaps = 37/241 (15%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADL--KEAT-GVLLQACGHEKDIEIGKRVHELVSAS 126
I T + ++ALSL N+++ + K+AT +L C D+ +++H + A
Sbjct: 122 IITASSRAGHPSEALSLFS-NMNSLGIRPKDATMASVLSCCAECLDLCGARQLHGHI-AK 179
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
F ++ I+ T L+ +Y C D+RR FD + N WN +V + + + +
Sbjct: 180 RDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDM 239
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
F + S ++P +T + AC + G +H + G V V ++++ MY
Sbjct: 240 FFRMLS-AGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYA 298
Query: 247 KC------------AFVEEMV-------------------KLFEVMPERNLVSWNSIICG 275
KC A +++MV ++FE M ERNLVSWN+++ G
Sbjct: 299 KCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTG 358
Query: 276 F 276
+
Sbjct: 359 Y 359
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 115/210 (54%), Gaps = 7/210 (3%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK- 160
+L AC + +E GK +H +S + D I+ L+TMY+ CG D++R+F+ +
Sbjct: 126 TVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSG 185
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ WNA+++ + ++ + + + ++ D +++P TF V+ AC + + G
Sbjct: 186 RRSVSSWNAMIAAYAQSGHFEEAIRLY----EDMDVEPSVRTFTSVLSACSNLGLLDQGR 241
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H + + G D+ + NAL+ MY +C +++ K+F+ +P R++VSW+++I F+E
Sbjct: 242 KIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETD 301
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + KM EG P+ T +VL
Sbjct: 302 LFDEAIEFYSKMQ--LEGVRPNYYTFASVL 329
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 110/223 (49%), Gaps = 20/223 (8%)
Query: 97 KEATGVLLQACGHEKD-------IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFP 149
+E G + GH +D +E +++H+ +S + S + + ++ Y CG
Sbjct: 17 EEKAGSRFDSSGHYRDALRQCQDLESVRQIHDRISGAA--SANVFLGNEIVRAYGKCGSV 74
Query: 150 LDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKA 209
+R FD++ +N + W ++++ + +N Y L ++ + +L+P+ + V+ A
Sbjct: 75 ASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM----DLQPNPVVYTTVLGA 130
Query: 210 CGGIADVGFGSGVHG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLV 267
C I + G +H ++ GL DV + N+L+ MY KC +E+ +LFE M R++
Sbjct: 131 CASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVS 190
Query: 268 SWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
SWN++I ++++G E+ L M P V T +VL
Sbjct: 191 SWNAMIAAYAQSGHFEEAIRLYEDM-----DVEPSVRTFTSVL 228
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 103/208 (49%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC D+ G+ VH+ + + + + T L+ +Y+ G ++R +FD ++ R
Sbjct: 328 VLLACASVGDLRAGRAVHDQILGNG-YKITLVNGTALVDLYTSYGSLDEARSLFDQIENR 386
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W L+ G++K T VL ++ E+ + T++ + CVI AC +
Sbjct: 387 DEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQA 446
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G+I D ++ +L+ MY + +E ++F+ M R+ ++W ++I G++++G
Sbjct: 447 HSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEH 506
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L +M EG P +T + VL
Sbjct: 507 GLALGLYKEME--LEGAEPSELTFMVVL 532
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 96/190 (50%), Gaps = 2/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + ++ G+++H L+S S D + L+TMY+ C D+ ++F L R
Sbjct: 227 VLSACSNLGLLDQGRKIHALIS-SRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRR 285
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+A+++ F + +L+ + + + ++ + ++P+ +TF V+ AC + D+ G V
Sbjct: 286 DVVSWSAMIAAFAETDLFDEAIEFYSKMQLEG-VRPNYYTFASVLLACASVGDLRAGRAV 344
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G + AL+ +Y ++E LF+ + R+ W +I G+S+ G
Sbjct: 345 HDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHR 404
Query: 283 CESFDLLIKM 292
+L +M
Sbjct: 405 TGVLELYREM 414
>gi|15228119|ref|NP_181269.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216847|sp|Q9ZUT4.1|PP192_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37320
gi|4056486|gb|AAC98052.1| hypothetical protein [Arabidopsis thaliana]
gi|37202040|gb|AAQ89635.1| At2g37320 [Arabidopsis thaliana]
gi|51969760|dbj|BAD43572.1| hypothetical protein [Arabidopsis thaliana]
gi|330254289|gb|AEC09383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 115/207 (55%), Gaps = 3/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+++CG +D G H L + F +D + + L+ +Y G ++ +VF+ + RN
Sbjct: 127 VRSCGLNRDFRTGSGFHCL-ALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERN 185
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W A++SGF + L ++ ++ T P+++TF ++ AC G +G G VH
Sbjct: 186 VVSWTAMISGFAQEWRVDICLKLYSKMRKSTS-DPNDYTFTALLSACTGSGALGQGRSVH 244
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
MGL + +SN+LI+MY KC +++ ++F+ +++VSWNS+I G++++G +
Sbjct: 245 CQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAM 304
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L MM + G PD IT + VL
Sbjct: 305 QAIELFELMMP-KSGTKPDAITYLGVL 330
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 65/109 (59%), Gaps = 6/109 (5%)
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPC-----VIKACGGIADVGFGSGVHGMAAKM 229
TKN + + + + +E SS + +K D ++F +++CG D GSG H +A K
Sbjct: 91 TKNGVSSVLEEVMLEDSS-SSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKG 149
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G I DV++ ++L+ +Y VE K+FE MPERN+VSW ++I GF++
Sbjct: 150 GFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQ 198
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL AC + G+ VH + + I+ LI+MY CG D+ R+FD
Sbjct: 226 ALLSACTGSGALGQGRSVH-CQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSN 284
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+++ WN++++G+ ++ L + +F + + KPD T+ V+ +C V G
Sbjct: 285 KDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRK 344
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSENG 280
+ A+ GL ++ + L+ + G+ ++E ++L E MP + N V W S++
Sbjct: 345 FFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL------- 397
Query: 281 FSCESF-DLLIKMMGCEEGFI--PD 302
FSC D+ + EE + PD
Sbjct: 398 FSCRVHGDVWTGIRAAEERLMLEPD 422
>gi|357472867|ref|XP_003606718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507773|gb|AES88915.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 120/211 (56%), Gaps = 8/211 (3%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
E+ L++ H + ++ GK++H L++ + + +I + LIT+Y+ CG +R++FD
Sbjct: 30 ESYAKLIETYTHSRSLQQGKKLHALLTTNGYVRFN-LIASNLITLYTTCGQLSIARKLFD 88
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDN-FTFPCVIKACGGIADV 216
+ N+ +W AL++ + + L +F E+ + + K ++ F P V+KACG + D
Sbjct: 89 KIPQTNIHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKACGHVGDR 148
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
+G VH + K D FVS+ALI MY KC V + K+F+ M ++LV+ N+++ G+
Sbjct: 149 IYGEQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGY 208
Query: 277 SENGFSCESFDLL--IKMMGCEEGFIPDVIT 305
++ G E+ L+ +K+MG P+V+T
Sbjct: 209 AQQGLPNEALSLVENMKLMGVN----PNVVT 235
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 116/259 (44%), Gaps = 70/259 (27%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACGH D G++VH LV F D +++ LI MYS CG D+R+VFD + +
Sbjct: 138 VLKACGHVGDRIYGEQVHCLV-LKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVK 196
Query: 163 -----------------------------------NLFQWNALVSGFTK----------- 176
N+ WNAL+SGF +
Sbjct: 197 DLVAMNAVVSGYAQQGLPNEALSLVENMKLMGVNPNVVTWNALISGFAQKCDREMVSEIF 256
Query: 177 ---NE--------LYTDVLSIFVELSSDTE------------LKPDNFTFPCVIKACGGI 213
NE +T VLS FV+ + E P + T ++ AC
Sbjct: 257 RLMNEDRVEPDVVSWTSVLSGFVQNFRNEEAFDAFKKMLLLGFCPTSATISALLPACATE 316
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
A V FG +HG A +G+ D++V +AL+ MY KC F+ E LF MPE+N V+ NS+I
Sbjct: 317 ARVRFGKEIHGYALVIGVEDDLYVRSALVDMYAKCGFISEARTLFYKMPEKNTVTMNSMI 376
Query: 274 CGFSENGFSCESFDLLIKM 292
G++ +G E+ +L +M
Sbjct: 377 FGYANHGCCEEAIELFNQM 395
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 84/180 (46%), Gaps = 3/180 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC E + GK +H + +D + + L+ MY+ CGF ++R +F + +
Sbjct: 309 LLPACATEARVRFGKEIHGY-ALVIGVEDDLYVRSALVDMYAKCGFISEARTLFYKMPEK 367
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N N+++ G+ + + + +F ++ + K D+ TF + AC + D+ G +
Sbjct: 368 NTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKLDHLTFTAALTACSHVGDIELGQRL 427
Query: 223 HGMAAKMGLIGDVFVSNA-LIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSENG 280
+ + I A ++ ++G+ +EE + + MP + +L W +++ +G
Sbjct: 428 FKIMQEKYCIEPRLEHYACMVDLFGRAGKLEEAYGIIKSMPVKPDLFVWGALLAACRNHG 487
>gi|302759777|ref|XP_002963311.1| hypothetical protein SELMODRAFT_26969 [Selaginella moellendorffii]
gi|300168579|gb|EFJ35182.1| hypothetical protein SELMODRAFT_26969 [Selaginella moellendorffii]
Length = 205
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 98/171 (57%), Gaps = 1/171 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ AC + +E G+R+HE + T F D + T L+ MY+ CG D++RVF+ +K R
Sbjct: 36 LVAACTKLQALEEGRRLHEHLII-TGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMKAR 94
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ + A++S + + + + L +F +S ++P+ +TF ++ A G+ ++ G V
Sbjct: 95 NVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKV 154
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
H A G +V V NAL+ MYGKC E K+F+ M RN++SW S+I
Sbjct: 155 HRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMI 205
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
D + D F ++ AC + + G +H G D+ + AL+ MY KC ++
Sbjct: 23 DRGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLD 82
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++FE M RN+ S+ ++I + + G E+ +L +M E P+ T T+L
Sbjct: 83 DAKRVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKV-EAIEPNAYTFATIL 139
>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 126/237 (53%), Gaps = 11/237 (4%)
Query: 77 SKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFI- 134
+K+L+K+ SL+ N+H D LL + + K +H +++ S +FI
Sbjct: 66 TKALSKSKSLIA-NVHRCD------SLLCHYAATRSLNKTKILHGHTITSGLLHSPNFIH 118
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ + L Y+ CG +R++FD L +LF WNA++ + + D L +F +
Sbjct: 119 LPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSG 178
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+ PD +TFP VIKAC ++ + G +HG A G ++FV N+L+AMY C V
Sbjct: 179 KCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLA 238
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++F VM +R++VSWN++I G+ +NG E+ + MM + PD T+V+ LP
Sbjct: 239 RQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMM--DARVEPDSATIVSALP 293
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 114/211 (54%), Gaps = 8/211 (3%)
Query: 102 VLLQACGHEKDIEIGKRVH--ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
++++AC + +G +H LVS FS++ + L+ MY CG +R+VF+ +
Sbjct: 189 LVIKACSVMSMLNVGVLIHGRALVSG---FSSNMFVQNSLLAMYMNCGKVGLARQVFNVM 245
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
R++ WN ++SG+ +N + L++F + D ++PD+ T + +CG + ++ G
Sbjct: 246 LKRSVVSWNTMISGWFQNGRPEEALAVFNSMM-DARVEPDSATIVSALPSCGHLKELELG 304
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
VH + K L + V NAL+ MY +C ++E +F E+++++W S+I G+ N
Sbjct: 305 IKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMN 364
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + + L M +G +P+ +T+ ++L
Sbjct: 365 GNAKSALALCPAMQ--LDGVVPNAVTLASLL 393
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC ++ GK +H V + +D ++ T LI MY+ C S +VF +
Sbjct: 392 LLSACASLCCLKQGKSLHAWV-MRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMK 450
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
WNAL+SG NEL + + +F + + E++ ++ TF VI A +AD+ +
Sbjct: 451 RTVPWNALLSGLIHNELAREAVGLFKSMLIE-EVEANHATFNSVIPAYAILADLKQVMNL 509
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP--ERNLVSWNSIICGFSENG 280
H + G I + V LI MY KC ++ K+F+ +P E++++ W+ +I G+ +G
Sbjct: 510 HSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHG 569
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ LL M G P+ IT +VL
Sbjct: 570 HG-ETAVLLFNQM-VHSGMQPNEITFTSVL 597
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 2/190 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L +CGH K++E+G +VH+LV + L+ MYS CG ++ VF K ++
Sbjct: 292 LPSCGHLKELELGIKVHKLVQ-KNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKD 350
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W ++++G+ N L++ + D + P+ T ++ AC + + G +H
Sbjct: 351 VITWTSMINGYIMNGNAKSALALCPAMQLDG-VVPNAVTLASLLSACASLCCLKQGKSLH 409
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ L DV V ALI MY KC V ++F + V WN+++ G N +
Sbjct: 410 AWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNELAR 469
Query: 284 ESFDLLIKMM 293
E+ L M+
Sbjct: 470 EAVGLFKSML 479
>gi|302810635|ref|XP_002987008.1| hypothetical protein SELMODRAFT_182822 [Selaginella moellendorffii]
gi|300145173|gb|EFJ11851.1| hypothetical protein SELMODRAFT_182822 [Selaginella moellendorffii]
Length = 694
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 109/213 (51%), Gaps = 8/213 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELV-----SASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
LL AC +D++ GK +H L+ D ++ L+ MY+ C D+ +FD
Sbjct: 48 LLGACSSLEDLQQGKMIHSLIVELGYGEQDGEEQDLMVGNSLVNMYAKCRSLADAIAIFD 107
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
+K R++F W +V+ F +N + + ++ D + P+ TF ++ AC ++
Sbjct: 108 RMKNRSVFSWTIMVTAFAQNGQLQRAIQCYRQMCCDG-VDPNAVTFVALLAACSSGGELA 166
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G + GL D+ V +A++ YGKC ++E + F+ MP +N V+WN +I +
Sbjct: 167 AGRKIAARVEASGLDSDLIVGSAIVNFYGKCGRLDEAREAFDRMPAKNNVTWNGMIAAYV 226
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++G + ++ DL M +EG +PD + V ++L
Sbjct: 227 QSGAATQAMDLFATME--DEGVVPDAMAVSSIL 257
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 10/213 (4%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL AC ++ G+++ V AS +D I+ + ++ Y CG ++R FD +
Sbjct: 154 ALLAACSSGGELAAGRKIAARVEASG-LDSDLIVGSAIVNFYGKCGRLDEAREAFDRMPA 212
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N WN +++ + ++ T + +F + D + PD ++ AC G+ G
Sbjct: 213 KNNVTWNGMIAAYVQSGAATQAMDLFATME-DEGVVPDAMAVSSILGACSGLES---GKR 268
Query: 222 VHG--MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS-- 277
+H + + L D V NAL+ MY +C +++ +F +P +N VSW +II F+
Sbjct: 269 IHSAVIDRRQELQSDRAVCNALVHMYARCGSLDDARLVFLAIPSKNTVSWTTIIAAFAQQ 328
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
EN E+ L + M +G P +T+ L
Sbjct: 329 ENRDDIEAAFQLFREMDL-DGVAPSEVTIFYAL 360
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 18/224 (8%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
A +L AC +E GKR+H ++ + +D + L+ MY+ CG D+R VF
Sbjct: 252 AVSSILGAC---SGLESGKRIHSAVIDRRQELQSDRAVCNALVHMYARCGSLDDARLVFL 308
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDV---LSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
++ ++N W +++ F + E D+ +F E+ D + P T ++ C +
Sbjct: 309 AIPSKNTVSWTTIIAAFAQQENRDDIEAAFQLFREMDLDG-VAPSEVTIFYALETCSKMD 367
Query: 215 DVGFGSG--VH---GMAAKMGLIGDVFVSNALIAMYGKC-AFVEEMVKLFEVMPERN--L 266
G SG +H A ++ L+ V V N+L+ MY C + ++ F+ + +N +
Sbjct: 368 RGGLASGRALHTAMDTAGRVELLSSVEVLNSLLDMYASCGSLIDAEAIFFDHLLGKNVDV 427
Query: 267 VSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
VSW ++I + ++G S + LL K M EG D I + T+L
Sbjct: 428 VSWTNMIAAYVQHGQSSSAL-LLAKKMDL-EGVKSDEIAMSTIL 469
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N+F W ++S + + + +D L +F ++ + + + D T ++ AC + D+ G
Sbjct: 5 KNVFSWTIIISAYVRADHGSDALQLFRTMNQEGD-RADEVTLTTLLGACSSLEDLQQGKM 63
Query: 222 VHGMAAKMGL------IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
+H + ++G D+ V N+L+ MY KC + + + +F+ M R++ SW ++
Sbjct: 64 IHSLIVELGYGEQDGEEQDLMVGNSLVNMYAKCRSLADAIAIFDRMKNRSVFSWTIMVTA 123
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
F++NG + +M C +G P+ +T V +L
Sbjct: 124 FAQNGQLQRAIQCYRQM--CCDGVDPNAVTFVALLA 157
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 35/223 (15%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A +L AC + +G+ +H ++++ I+ L+ MY G D+ RVF
Sbjct: 464 AMSTILGACTAHQATSLGRELHRRAR-ELGYASNTIVGNALVFMYGSWGRVDDAARVFQE 522
Query: 159 LKTRNLFQWN---ALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
LK N N A+++G+ + LS++ E++ ++P + TF + +AC +
Sbjct: 523 LKNANSPNSNTFTAMIAGYARQGRTLQALSLYNEMNLHG-VEPRDATFTSIFQAC---SH 578
Query: 216 VGFGS-------------GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
GF + G+ A G + D+ G+ FV E +L MP
Sbjct: 579 AGFLAKALEHFVFIYDFQGLEPTAEHFGCVVDLL---------GRSGFVREAEELVLAMP 629
Query: 263 -ERNLVSWNSII--CGFSENGFSCESFDLLIKMM--GCEEGFI 300
E ++V+W S++ CG S+ G S + + + + GC ++
Sbjct: 630 YEPDIVAWRSLLASCGGSDQGASRRAAEEAVHLQPSGCSSHYV 672
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 82/166 (49%), Gaps = 10/166 (6%)
Query: 134 IINTRLITMYSLCGFPLDSRRVF-DSLKTRNL--FQWNALVSGFTKNELYTDVLSIFVEL 190
++N+ L+ MY+ CG +D+ +F D L +N+ W +++ + ++ + L + ++
Sbjct: 395 VLNS-LLDMYASCGSLIDAEAIFFDHLLGKNVDVVSWTNMIAAYVQHGQSSSALLLAKKM 453
Query: 191 SSDTE-LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
D E +K D ++ AC G +H A ++G + V NAL+ MYG
Sbjct: 454 --DLEGVKSDEIAMSTILGACTAHQATSLGRELHRRARELGYASNTIVGNALVFMYGSWG 511
Query: 250 FVEEMVKLFEVMPERNLVSWN---SIICGFSENGFSCESFDLLIKM 292
V++ ++F+ + N + N ++I G++ G + ++ L +M
Sbjct: 512 RVDDAARVFQELKNANSPNSNTFTAMIAGYARQGRTLQALSLYNEM 557
>gi|302803813|ref|XP_002983659.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
gi|300148496|gb|EFJ15155.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
Length = 917
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 106/208 (50%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C D+ GK +H V + ++ T LI MY CG D+RRVFD L +
Sbjct: 109 VLDGCSAIGDLSRGKLLHGFV-LEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQ 167
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +++ + +++ + L +F + L P+ T+ I AC + + G +
Sbjct: 168 DVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVL-PNRITYATAISACAHVESMADGKLI 226
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G DV VS A++ MYGKC +E+ ++FE MP N VSWN+I+ +++G
Sbjct: 227 HSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCC 286
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + M + G PD +T +T+L
Sbjct: 287 VEAL-WYFQRMQLQGGITPDKVTFITIL 313
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 3/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ AC H + + GK +H V F +D +++ ++ MY CG D+R VF+ + N
Sbjct: 211 ISACAHVESMADGKLIHSQV-LEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPN 269
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WNA+V+ T++ + L F + + PD TF ++ AC A + FG +H
Sbjct: 270 TVSWNAIVAACTQHGCCVEALWYFQRMQLQGGITPDKVTFITILNACSSPATLTFGELLH 329
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ G + V N ++ MY C ++ F M ER+ +SWN+II G ++ GF
Sbjct: 330 ECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCD 389
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M+ EG PD T ++++
Sbjct: 390 EAVHLFRRMLA--EGITPDKFTFISII 414
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL C + I G+ VH V AS +F D ++ I MY CG D+ VF SL
Sbjct: 8 LLGLCAKKSAIAEGRFVHSRVEAS-EFRRDDLVQNATIHMYGKCGCVEDAVSVFQSLDHP 66
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN+L++ F ++ + IF + L PD TF V+ C I D+ G +
Sbjct: 67 SQVSWNSLLAAFARDGQFQQAFQIFQRMKLQG-LAPDRITFVTVLDGCSAIGDLSRGKLL 125
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + GL +V V +LI MYGKC VE+ ++F+ + +++VSW S+I + ++
Sbjct: 126 HGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRC 185
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L +M G +P+ IT T +
Sbjct: 186 VEALELFHRMR--PSGVLPNRITYATAI 211
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + GK +H + F+ + LI MY+ CG ++ RVF +N
Sbjct: 512 LNACASLTALSEGKLIHAH-AIERGFAASPAVGNALINMYAKCGCLEEADRVFHQCG-KN 569
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L WN + + + + + + + L +F E+ + LK D +F V+ C ++ G +H
Sbjct: 570 LVSWNTIAAAYVQRDKWREALQLFQEMQLEG-LKADKVSFVTVLNGCSSASE---GRKIH 625
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ + G+ D VS AL+ MY ++E ++F M R++VSWN++I G +E+G S
Sbjct: 626 NILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSR 685
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + +M EG PD I+ VTVL
Sbjct: 686 EAIQMFQRMQ--LEGVAPDKISFVTVL 710
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 104/197 (52%), Gaps = 6/197 (3%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+++H ++ T +D I++T L+ MY+ ++ R+F ++ R++ WNA+++G
Sbjct: 621 GRKIHNIL-LETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKA 679
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG--VHGMAAKMGLIG 233
++ L + + +F + + + PD +F V+ A G + V + + G
Sbjct: 680 EHGLSREAIQMFQRMQLEG-VAPDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYET 738
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
D V NA+++M+G+ + E + FE + ER+ SWN I+ +++G ++ L +M
Sbjct: 739 DTIVGNAIVSMFGRSGRLAEARRAFERIRERDAASWNVIVTAHAQHGEVEQALKLFRRMQ 798
Query: 294 GCEEGFIPDVITVVTVL 310
+E PD IT+V+VL
Sbjct: 799 --QESSRPDSITLVSVL 813
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 87/179 (48%), Gaps = 4/179 (2%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + + LI M+S G ++R +FD +K R++ W +++S + ++ D L L
Sbjct: 438 DVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGC-TRLM 496
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
L ++FT + AC + + G +H A + G V NALI MY KC +
Sbjct: 497 RLEGLMGNDFTLVTALNACASLTALSEGKLIHAHAIERGFAASPAVGNALINMYAKCGCL 556
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
EE ++F +NLVSWN+I + + E+ L +M EG D ++ VTVL
Sbjct: 557 EEADRVFH-QCGKNLVSWNTIAAAYVQRDKWREALQLFQEMQ--LEGLKADKVSFVTVL 612
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 17/213 (7%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + G+ +HE + + I+ ++TMYS CG ++ F ++ R
Sbjct: 312 ILNACSSPATLTFGELLHECI-LQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVER 370
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN ++SG + + + +F + ++ + PD FTF +I G A + +
Sbjct: 371 DAISWNTIISGHAQAGFCDEAVHLFRRMLAEG-ITPDKFTFISIID---GTARMQEAKIL 426
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ + G+ DVF+ +ALI M+ + V E LF+ M +R++V W SII + ++G S
Sbjct: 427 SELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSS 486
Query: 283 CESFDLLIKMMGCE-----EGFIPDVITVVTVL 310
++ +GC EG + + T+VT L
Sbjct: 487 DDA-------LGCTRLMRLEGLMGNDFTLVTAL 512
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
TF ++ C + + G VH D V NA I MYGKC VE+ V +F+ +
Sbjct: 4 TFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSL 63
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ VSWNS++ F+ +G ++F + +M +G PD IT VTVL
Sbjct: 64 DHPSQVSWNSLLAAFARDGQFQQAFQIFQRMK--LQGLAPDRITFVTVL 110
>gi|242095158|ref|XP_002438069.1| hypothetical protein SORBIDRAFT_10g007640 [Sorghum bicolor]
gi|241916292|gb|EER89436.1| hypothetical protein SORBIDRAFT_10g007640 [Sorghum bicolor]
Length = 563
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 113/212 (53%), Gaps = 7/212 (3%)
Query: 103 LLQACGHEKDIEIGKRVHE--LVSASTQFSN-DFI-INTRLITMYSLCGFPLDSRRVFDS 158
LLQ+C GK VH +++AS+ S D + ++T+L+ YS G +R VFD
Sbjct: 17 LLQSCIGANAFRQGKSVHHRAIITASSDPSPPDLLHLSTKLVMFYSHFGDVAAARAVFDG 76
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ R++ W A+VSG+ KN + L +F L + +P+ FTF +AC G
Sbjct: 77 MPHRSVVSWTAMVSGYAKNGRAPEALELFA-LMLRSGARPNQFTFGSAARACAGGRCARS 135
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G VH AAK GD+FV +AL+ M+ +C V + +LF M ++LVSWN+++ GF E
Sbjct: 136 GEQVHACAAKGRHAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNALMRGFVE 195
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G ++ L M+ +G +PD T + L
Sbjct: 196 RGHYSDALGLFASML--RDGMLPDHFTFGSAL 225
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 116/238 (48%), Gaps = 7/238 (2%)
Query: 76 ESKSLNKALSLLQENLHNADLKE--ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
E + AL L L + L + G L+ACG I + +H + + ++
Sbjct: 195 ERGHYSDALGLFASMLRDGMLPDHFTFGSALKACGAISVIFNVELIHTCI-IKLGYWDEK 253
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYT-DVLSIFVELSS 192
+ LI Y+ C +R ++DS+ +L AL+S + + Y+ D + +F ++
Sbjct: 254 VATASLIDSYAKCRSLSSARVIYDSICEPDLVSSTALISDHSMDRNYSEDAMKLFCKIHR 313
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ L+ D ++ C +A + FG+ +H K +GD+ + NAL+ MY K
Sbjct: 314 EG-LRIDGILLSALLGVCANVASIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGEYL 372
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + F+ MP RN++SW S+I +++GF ++ L +M E+G P+ +T +++L
Sbjct: 373 DSRRAFDEMPSRNVISWTSLITACAQHGFGEDAVTLFARME--EDGVKPNDVTFLSLL 428
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 117/210 (55%), Gaps = 3/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G LLQ+ + K + ++H V+ + + T+L Y++CG ++ +FD +
Sbjct: 26 GTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIV 85
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+N F WN+++ G+ N + L +++++ + KPDNFT+P V+KACG + G
Sbjct: 86 LKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQ-KPDNFTYPFVLKACGDLLLREMGR 144
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH + GL DV+V N++++MY K VE +F+ M R+L SWN+++ GF +NG
Sbjct: 145 KVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNG 204
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +F++ M +GF+ D T++ +L
Sbjct: 205 EARGAFEVFGDMR--RDGFVGDRTTLLALL 232
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 112/211 (53%), Gaps = 7/211 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG E+G++VH LV D + +++MY G +R VFD + R
Sbjct: 130 VLKACGDLLLREMGRKVHALVVVGG-LEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVR 188
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN ++SGF KN +F ++ D D T ++ ACG + D+ G +
Sbjct: 189 DLTSWNTMMSGFVKNGEARGAFEVFGDMRRDG-FVGDRTTLLALLSACGDVMDLKVGKEI 247
Query: 223 HGMAAKMGLIGDV---FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
HG + G G V F+ N++I MY C V KLFE + +++VSWNS+I G+ +
Sbjct: 248 HGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKC 307
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + ++ +L +M+ G +PD +TV++VL
Sbjct: 308 GDAFQALELFGRMVVV--GAVPDEVTVISVL 336
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 106/203 (52%), Gaps = 7/203 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELV---SASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
LL ACG D+++GK +H V S + N F++N+ +I MY C +R++F+ L
Sbjct: 231 LLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNS-IIDMYCNCESVSCARKLFEGL 289
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+ +++ WN+L+SG+ K L +F + + PD T V+ AC I+ + G
Sbjct: 290 RVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAV-PDEVTVISVLAACNQISALRLG 348
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+ V K G + +V V ALI MY C + ++F+ MPE+NL + ++ GF +
Sbjct: 349 ATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIH 408
Query: 280 GFSCESFDLLIKMMGCEEGFIPD 302
G E+ + +M+G +G PD
Sbjct: 409 GRGREAISIFYEMLG--KGVTPD 429
>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 662
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 121/212 (57%), Gaps = 12/212 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFII--NTRLITMYSLCGFPLDSRRVFDSLK 160
+L +CG+ D+ GK +H LV ++ + ++ T L+TMYS C DS +VF+SL
Sbjct: 209 VLVSCGNLGDLVNGKLIHGLV---VKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLA 265
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ W + + G +N LS+F E+ + P++FT ++ AC +A + G
Sbjct: 266 YASHVTWTSFIVGLVQNGREEVALSMFREMMR-CSISPNHFTLSSILHACSSLAMLEAGE 324
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H + K+G+ G+ FV ALI +YGKC VE+ +F+ + E ++VS N++I +++NG
Sbjct: 325 QIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNG 384
Query: 281 FSCESFDLL--IKMMGCEEGFIPDVITVVTVL 310
F E+ +L +K +G E P+V+T +++L
Sbjct: 385 FGHEALELFERLKKLGLE----PNVVTFISIL 412
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 102/195 (52%), Gaps = 3/195 (1%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G++ H L +D + T ++ MY+ G D+R VFD + +++ + AL+ G+
Sbjct: 120 GQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYN 179
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
++ L + L +F ++ + +KP+ +T V+ +CG + D+ G +HG+ K GL V
Sbjct: 180 QHGLDGEALEVFEDMVG-SRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVV 238
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+L+ MY KC VE+ +K+F + + V+W S I G +NG + + +MM C
Sbjct: 239 ASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRC 298
Query: 296 EEGFIPDVITVVTVL 310
P+ T+ ++L
Sbjct: 299 --SISPNHFTLSSIL 311
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 107/210 (50%), Gaps = 8/210 (3%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
L+ C ++K + K +H ++ + + FS +LI Y C ++R++FD +
Sbjct: 7 LIAQCTNKKSLTTLKSLHTHILKSGSLFS---FFGHKLIDGYIKCSVITEARKLFDEMPN 63
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ WN+++S + + ++ + + L PD +TF + KA + G
Sbjct: 64 RHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVL-PDAYTFSAIFKAFSEMGVSREGQK 122
Query: 222 VHGMAAKMGL-IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
HG+A +G + D FV+ ++ MY K +++ +F+ + ++++V + ++I G++++G
Sbjct: 123 AHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHG 182
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ ++ M+G P+ T+ +VL
Sbjct: 183 LDGEALEVFEDMVGSR--IKPNEYTLASVL 210
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 7/211 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL--K 160
L+QAC + G+ +H +A F + L+ +Y CG + +VFD + +
Sbjct: 810 LIQACARLLALREGECLHA-EAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVR 868
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RNL WN++++ F N +VL++F E+ + PD FT V+ AC + G
Sbjct: 869 GRNLVSWNSMLNSFAANGRPNEVLTVFWEMLG-VDFAPDGFTIVSVLTACAEFGALALGR 927
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSEN 279
VH K+GL+ + VSNALI +Y KC V + ++FE M R +VSW S+I G + N
Sbjct: 928 RVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAAN 987
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
GF E+ +L M E +P IT+V VL
Sbjct: 988 GFGKEALELFSLME--REKLVPTEITMVGVL 1016
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 72/127 (56%), Gaps = 4/127 (3%)
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
+ +EL PD T+P +I+AC + + G +H AAK G + VFV N+L+ +Y
Sbjct: 790 VALELHRRRLALPDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLY 849
Query: 246 GKCAFVEEMVKLFEVMP--ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
G C E K+F+ MP RNLVSWNS++ F+ NG E + +M+G + F PD
Sbjct: 850 GACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVD--FAPDG 907
Query: 304 ITVVTVL 310
T+V+VL
Sbjct: 908 FTIVSVL 914
>gi|347954532|gb|AEP33766.1| organelle transcript processing 82, partial [Lepidium virginicum]
Length = 464
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 125/239 (52%), Gaps = 8/239 (3%)
Query: 76 ESKSLNKALSLLQENLH-NADLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
E+ + +AL L +E + N E+T V ++ AC +IE+G++VH L+ SN
Sbjct: 182 ETFNYKEALELYKEMVKTNVKPDESTMVTVVSACAQSSNIELGRQVHSLIEDHGFGSNLK 241
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
++N L+ MYS CG + R+F L ++ WN L+ G T LY + L +F E+
Sbjct: 242 VVNA-LMDMYSKCGEMETACRLFQGLVNKDAISWNTLIGGHTHMNLYKEALFLFQEMLRS 300
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM--GLIGDVFVSNALIAMYGKCAFV 251
E P++ T V+ AC + + G +H K G+ + +LI MY KC +
Sbjct: 301 GE-SPNDVTMLSVLSACAHLGAIDIGRWIHVYIDKRLKGVTNSSSLRTSLIDMYAKCGDI 359
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E ++F+ M R+L SWN++I GF+ +G + +FDL KM + G PD IT V +L
Sbjct: 360 EAASQVFDSMLARSLSSWNAMIFGFAMHGKANAAFDLFSKMR--KSGIEPDDITFVGLL 416
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 97/174 (55%), Gaps = 3/174 (1%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
T LIT Y+ G+ +R++FD + +++ WNA++SG+ + Y + L ++ E+ T +
Sbjct: 143 TALITGYASRGYTKSARKLFDEILVKDIVSWNAMISGYVETFNYKEALELYKEMVK-TNV 201
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
KPD T V+ AC +++ G VH + G ++ V NAL+ MY KC +E +
Sbjct: 202 KPDESTMVTVVSACAQSSNIELGRQVHSLIEDHGFGSNLKVVNALMDMYSKCGEMETACR 261
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
LF+ + ++ +SWN++I G + E+ L +M+ G P+ +T+++VL
Sbjct: 262 LFQGLVNKDAISWNTLIGGHTHMNLYKEALFLFQEML--RSGESPNDVTMLSVL 313
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 81/151 (53%), Gaps = 7/151 (4%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VF++++ NL WN + G N L ++V + S L P++++FP ++K+C
Sbjct: 29 VFETIEEPNLLIWNTMFRGHALNSDSVSALKLYVCMIS-LGLLPNSYSFPFLLKSCAKSK 87
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
G +HG K+G D++V +LI+MY + +E+ K+F+ R++VS+ ++I
Sbjct: 88 AFREGQQIHGHVVKLGYDLDMYVHTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALIT 147
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
G++ G++ + L +E + D+++
Sbjct: 148 GYASRGYTKSARKLF------DEILVKDIVS 172
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 123/234 (52%), Gaps = 10/234 (4%)
Query: 83 ALSLLQENLHNADLKEA--TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLI 140
A+ L LH++ L + +L+ACG + + G+ VH + S++ ++ R++
Sbjct: 114 AIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSR-ALKLGLSSNRLVRLRIM 172
Query: 141 TMYSLCGFPLDSRRVFDSLK----TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
+Y CG D+RRVF+ + ++ W A++ GF +NE L F + + +
Sbjct: 173 ELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGEN-V 231
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
+P+ FT CV+ AC + + G VH K + ++FV NALI MY +C ++E
Sbjct: 232 RPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQT 291
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ M +R+++++N++I G S NG S ++ +L M+G P +T V VL
Sbjct: 292 VFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIG--RRLRPTNVTFVGVL 343
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
R+F N++ + AL+ GF + Y D + ++ + D+ L PDN+ ++KACG
Sbjct: 85 RIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSIL-PDNYLMASILKACGSQ 143
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE----RNLVSW 269
+ G VH A K+GL + V ++ +YGKC + + ++FE MPE ++ V W
Sbjct: 144 LALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCW 203
Query: 270 NSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++I GF N + + M G E P+ T+V VL
Sbjct: 204 TAMIDGFVRNEEMNRALEAFRGMQG--ENVRPNEFTIVCVL 242
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +EIG+ VH + N F+ N LI MYS CG +++ VFD +K R
Sbjct: 241 VLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNA-LINMYSRCGSIDEAQTVFDEMKDR 299
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
++ +N ++SG + N + +F + L+P N TF V+ AC GG+ D GF
Sbjct: 300 DVITYNTMISGLSMNGKSRQAIELF-RVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKI 358
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
H M G+ + ++ + G+ +EE L M
Sbjct: 359 -FHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTM 398
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 103/182 (56%), Gaps = 3/182 (1%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F + + + LI MY C P D+R+VFD++ +N+ WNA++ +++N ++V+ +F+
Sbjct: 248 FESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFL 307
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
++ S + PD FT+ ++ C + G +H K ++FV+NALI MY K
Sbjct: 308 DMIS-CGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKA 366
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
++E K FE M R+ +SWN+II G+ + +F L +M+ +G +PD +++ +
Sbjct: 367 GALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMI--LDGIVPDEVSLAS 424
Query: 309 VL 310
+L
Sbjct: 425 IL 426
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 114/208 (54%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C + +E+G+++H + +F+++ +N LI MY+ G ++ + F+ + R
Sbjct: 324 ILSTCACFEYLEVGRQLHSAI-IKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYR 382
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA++ G+ + E+ S+F + D + PD + ++ ACG I + G
Sbjct: 383 DHISWNAIIVGYVQEEVEAGAFSLFRRMILDG-IVPDEVSLASILSACGNIKVLEAGQQF 441
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H ++ K+GL ++F ++LI MY KC +++ K + MPER++VS N++I G++ +
Sbjct: 442 HCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKN-T 500
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
ES +LL +M G P IT +++
Sbjct: 501 KESINLLHEMQIL--GLKPSEITFASLI 526
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 115/278 (41%), Gaps = 71/278 (25%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSAS----TQFSNDFIIN-------------------- 136
V L AC +++ +G+ VH V S T F +I+
Sbjct: 51 AVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPF 110
Query: 137 --------TRLITMYSLCGFPLDSRRVFDSLKT--------------------------- 161
T LI+ Y G P ++ +FD ++
Sbjct: 111 PHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAVPDQVALVTVLNAYISLGKLDDACQ 170
Query: 162 ---------RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
RN+ WN ++SG K Y + L+ F ++S +K T V+ A
Sbjct: 171 LFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHG-VKSSRSTLASVLSAIAS 229
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
+A + G VH A K G ++V+++LI MYGKC ++ ++F+ + ++N++ WN++
Sbjct: 230 LAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAM 289
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +S+NGF +L + M+ C G PD T ++L
Sbjct: 290 LGVYSQNGFLSNVMELFLDMISC--GIHPDEFTYTSIL 325
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 111/218 (50%), Gaps = 21/218 (9%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV------- 155
L+ C + +G ++H + + T L+ MY +DS+R+
Sbjct: 525 LIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMY------MDSQRLADANILF 578
Query: 156 --FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
F SLK+ + W AL+SG +NE L+++ E+ D + PD TF V++AC +
Sbjct: 579 SEFSSLKS--IVMWTALISGHIQNECSDVALNLYREMR-DNNISPDQATFVTVLQACALL 635
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF-EVMPERNLVSWNSI 272
+ + G +H + G D S+AL+ MY KC V+ V++F E+ +++++SWNS+
Sbjct: 636 SSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSM 695
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I GF++NG++ + + +M + PD +T + VL
Sbjct: 696 IVGFAKNGYAKCALKVFDEMT--QSCITPDDVTFLGVL 731
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 67/147 (45%), Gaps = 7/147 (4%)
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
QWN V G TK+ VL + + PD FTF + AC + ++ G VH
Sbjct: 15 QWNWRVQG-TKHYSSERVLQFYASFMNSGH-SPDQFTFAVTLSACAKLQNLHLGRAVHSC 72
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNL--VSWNSIICGFSENGFSC 283
K GL F ALI +Y KC + +F P +L VSW ++I G+ + G
Sbjct: 73 VIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPH 132
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + KM +PD + +VTVL
Sbjct: 133 EALHIFDKM---RNSAVPDQVALVTVL 156
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 128/239 (53%), Gaps = 9/239 (3%)
Query: 76 ESKSLNKALSLLQENLHNADL---KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSND 132
+ ++ AL LL E + A++ K +LQ C +E GK+VH + S
Sbjct: 226 QQGQVDVALELL-ETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGREL 284
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
+++N+ LITMY CG ++R++F L R++ W A+V+G+ + + + +++F +
Sbjct: 285 WVVNS-LITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQ 343
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+KPD TF V+ +C A + G +H G DV++ +AL++MY KC ++
Sbjct: 344 QG-IKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMD 402
Query: 253 EMVKLFEVMPERNLVSWNSIICG-FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +F M ERN+V+W +II G +++G E+ + +M ++G PD +T +VL
Sbjct: 403 DASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMK--KQGIKPDKVTFTSVL 459
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 116/209 (55%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL A + + +++G++VH E+V A + + T L+ MY+ CG +R +FD L
Sbjct: 154 LLNAFTNPELLQLGQKVHMEIVEAGLELEPR--VGTSLVGMYAKCGDISKARVIFDRLPE 211
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N+ W L++G+ + + DV +E E+ P+ TF +++ C A + G
Sbjct: 212 KNVVTWTLLIAGYAQ-QGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKK 270
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH + G +++V N+LI MY KC +EE KLF +P R++V+W +++ G+++ GF
Sbjct: 271 VHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGF 330
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L +M ++G PD +T +VL
Sbjct: 331 HDEAINLFRRMQ--QQGIKPDKMTFTSVL 357
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 124/250 (49%), Gaps = 17/250 (6%)
Query: 68 QEITTLCEESKSLNKALSLLQENLHNADLKEATGV-------LLQACGHEKDIEIGKRVH 120
++++ LC+ + L +AL ++ N + + T V LLQ C + +E G+ VH
Sbjct: 17 RDVSVLCKTGR-LKEALGIM-----NTMILQGTRVYSDVFRGLLQECARLRSLEQGREVH 70
Query: 121 ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELY 180
+ S N ++ NT L++MY+ CG D+RRVFDS++ RN+ W A++ F
Sbjct: 71 AAILKSGIQPNRYLENT-LLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKN 129
Query: 181 TDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNA 240
+ + E KPD TF ++ A + G VH + GL + V +
Sbjct: 130 LEAFKCY-ETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTS 188
Query: 241 LIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI 300
L+ MY KC + + +F+ +PE+N+V+W +I G+++ G + +LL M E
Sbjct: 189 LVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAE--VA 246
Query: 301 PDVITVVTVL 310
P+ IT ++L
Sbjct: 247 PNKITFASIL 256
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 6/163 (3%)
Query: 103 LLQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L +C ++ GKR+H+ LV A ++ D + + L++MY+ CG D+ VF+ +
Sbjct: 356 VLTSCSSPAFLQEGKRIHQQLVHAG--YNLDVYLQSALVSMYAKCGSMDDASLVFNQMSE 413
Query: 162 RNLFQWNALVSGF-TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN+ W A+++G ++ + L F ++ +KPD TF V+ AC + V G
Sbjct: 414 RNVVAWTAIITGCCAQHGRCREALEYFDQMKKQG-IKPDKVTFTSVLSACTHVGLVEEGR 472
Query: 221 G-VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
M G+ V + + + G+ +EE + MP
Sbjct: 473 KHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMP 515
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 38/268 (14%)
Query: 77 SKSLNKALSLLQENLHNADL--KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFI 134
S + AL++ + LH + L K L++CG +E G+++H V T +D
Sbjct: 86 SPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHV-LKTGLGDDLF 144
Query: 135 INTRLITMYSLCG--------------------------------FPLDSRRVFDSLKTR 162
I LI +Y+ CG L SRRVF +
Sbjct: 145 IQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELASRRVFGETPVK 204
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WNA+++G++ +++VL +F ++ +KPDN T V+ AC + + G V
Sbjct: 205 NVVSWNAMITGYSHAGRFSEVLVLFEDMQ-HAGVKPDNCTLVSVLSACAHVGALSQGEWV 263
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G+ D FV+ AL+ MY KC +E+ +++F +++ +WNSII G S +G
Sbjct: 264 HAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSG 323
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + +M+ EGF P+ +T V VL
Sbjct: 324 QHALQIFSEML--VEGFKPNEVTFVCVL 349
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+ +F + N + WN ++ + + L+IF ++ + L PD +TF +K+CG
Sbjct: 61 AHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVL-PDKYTFTFALKSCG 119
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
+ V G +HG K GL D+F+ N LI +Y C +E+ L + M ER++VSWN+
Sbjct: 120 SFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNA 179
Query: 272 IICGFSENGF 281
++ ++E G
Sbjct: 180 LLSAYAERGL 189
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 86 LLQENLHNADLKEATGVL---LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITM 142
+L E++ +A +K L L AC H + G+ VH + + S D + T L+ M
Sbjct: 227 VLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNG-ISIDGFVATALVDM 285
Query: 143 YSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFT 202
YS CG + VF+S +++ WN+++SG + + L IF E+ + KP+ T
Sbjct: 286 YSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEG-FKPNEVT 344
Query: 203 FPCVIKAC--GGIADVG-----FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
F CV+ AC G+ D G VHG+ + G ++ + G+ +EE
Sbjct: 345 FVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYG------CMVDLLGRVGLLEEAE 398
Query: 256 KLFEVMPERNL-VSWNSIICGFSENG 280
+L + MP++ V W S++ +G
Sbjct: 399 ELVQKMPQKEASVVWESLLGACRNHG 424
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 116/208 (55%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+QACG+ + GK H L ++F + T L+ MY CGF + ++F+ + R
Sbjct: 220 LIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYR 279
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+A+++GF +N + +S+F ++ +D+ + P++ TF ++ AC + + G V
Sbjct: 280 DVVVWSAIIAGFARNGRALESISMFRQMLADS-VTPNSVTFASIVLACSSLGSLKQGRSV 338
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + G+ DV + I MY KC + ++F +PE+N+ SW+++I GF +G
Sbjct: 339 HGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLC 398
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L +M + +P+ +T V+VL
Sbjct: 399 AEALNLFYEMRSVNQ--LPNSVTFVSVL 424
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 126/267 (47%), Gaps = 10/267 (3%)
Query: 49 SLSLSAKT-NNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVL--LQ 105
SL +++K N+ + + LH I ++K L L + L L ++ ++ ++
Sbjct: 62 SLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVK 121
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC + K H L + + D + L+ +Y+ G ++ +VF+ + +N
Sbjct: 122 ACFGLSLFQGAKLFHSL-AIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSV 180
Query: 166 QWNALVSGFTKNELYTDVLSIFVEL-SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
W ++ G V +F + S EL P F +I+ACG + G HG
Sbjct: 181 IWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDP--FVVEGLIQACGNVYAGKEGKTFHG 238
Query: 225 MAAKMGLI-GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ K I + F+ +L+ MY KC F++ +KLFE + R++V W++II GF+ NG +
Sbjct: 239 LCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRAL 298
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
ES + +M+ + P+ +T +++
Sbjct: 299 ESISMFRQMLA--DSVTPNSVTFASIV 323
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 107/198 (54%), Gaps = 4/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+ +GK+ H L+ F + + L+ MY+ CG D++ FD L ++ W A+VS
Sbjct: 337 LAVGKQAHGLM-VKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVS 395
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G +N + + L+++ + + + P T ++AC GIA + G +H K GL
Sbjct: 396 GHVQNGEHEEALTLYARMDKEG-IIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLG 454
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
V +AL MY KC +E+ + +F +P+R++++WNSII GFS+NG + DL +M
Sbjct: 455 LGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEM 514
Query: 293 MGCEEGFIPDVITVVTVL 310
EG IPD IT + +L
Sbjct: 515 K--MEGTIPDNITFINIL 530
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 103/197 (52%), Gaps = 6/197 (3%)
Query: 115 IGKRVHELVSASTQFSNDFI-INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
+G+++H L+ DF+ + L+TMY+ G + VF+S + RN W+A+++G
Sbjct: 238 MGEQMHGLIVKDGLL--DFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITG 295
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
+ +N +S+F ++ + P FTF V+ A + + G HG+ K+G
Sbjct: 296 YAQNGEADSAVSMFSQMHA-AGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEV 354
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
++V +AL+ MY KC + + + F+ + E ++V W +++ G +NG E+ L +M
Sbjct: 355 QIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMD 414
Query: 294 GCEEGFIPDVITVVTVL 310
+EG IP T+ + L
Sbjct: 415 --KEGIIPSKSTIASGL 429
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 2/191 (1%)
Query: 120 HELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNEL 179
H L ++ + T L+ MY G D+RRVFD + RN F W+ +V+G+ +
Sbjct: 140 HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKC 199
Query: 180 YTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSN 239
+ +F + + + F V+ A + G +HG+ K GL+ V V N
Sbjct: 200 SEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVEN 259
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
+L+ MY K + +FE ERN ++W+++I G+++NG + + + +M GF
Sbjct: 260 SLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAA--GF 317
Query: 300 IPDVITVVTVL 310
P T V VL
Sbjct: 318 TPTEFTFVGVL 328
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 106/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L +C + G +VH + S +D + ++ YS CGF + F+S+
Sbjct: 354 LFSSCSVSSTVAEGAQVH-VHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRP 412
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N W ++SGF +N L F ++ + K D F+ VIKA A V G +
Sbjct: 413 NSVCWAGIISGFAQNGEGEKALMQFCKMRKFID-KTDEFSSSSVIKAVSSWAAVEQGRHL 471
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K GL ++V +A+I MY KC VE+ K+F VMPE+N+VSWNS+I G+++NGF
Sbjct: 472 HAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFC 531
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M G +P +T V +L
Sbjct: 532 KEALLLFQEMT--SSGILPTAVTFVGIL 557
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 125/237 (52%), Gaps = 10/237 (4%)
Query: 78 KSLNKALSLLQENLH-NADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
++L+ L +L+ + NA AT + AC + +H L+ FSN ++
Sbjct: 24 QALSCFLQMLRAGIEPNAITYSAT---ISACAQSTRPSLATSLHCLI-LKKGFSNQLFVS 79
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE- 195
+ LI+MYS ++R +FD + R+ WN++++G+++ L + +F + + E
Sbjct: 80 SGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNEEACGLFCSMINSCEN 139
Query: 196 --LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
L +FT V+KACGG+ G VHG A K+G D+FVS + + MY KC ++
Sbjct: 140 WKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDM 199
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ + +++V+WN++I G+++N + E+ +L +M EGF P+ T VL
Sbjct: 200 AGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQME--LEGFKPNDTTFCCVL 254
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 109/207 (52%), Gaps = 4/207 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L+ACG IGK VH + F +D ++ + MY CG + FD ++
Sbjct: 150 ATVLKACGGLGCSRIGKCVHGY-AVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIE 208
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+++ WN +++G+ +N + + +F ++ + KP++ TF CV+KA ++D G
Sbjct: 209 NKDIVAWNTMITGYAQNCYEEEAIELFYQMELEG-FKPNDTTFCCVLKASTAMSDSAVGR 267
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H K+G DVFV+ AL+ MY K +E++ + F M +RNLVS+N++I G+S G
Sbjct: 268 CFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMG 327
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVV 307
E+ + ++ EG PD T V
Sbjct: 328 KYEEALRVYSQLQ--SEGMEPDSFTFV 352
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 2/178 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+A D +G+ H V S D + T L+ MYS D R F + R
Sbjct: 253 VLKASTAMSDSAVGRCFHAKV-LKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKR 311
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL +NAL++G++ Y + L ++ +L S+ ++PD+FTF + +C + V G+ V
Sbjct: 312 NLVSFNALITGYSLMGKYEEALRVYSQLQSEG-MEPDSFTFVGLFSSCSVSSTVAEGAQV 370
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H + K GL DV V N+++ Y KC F + ++ FE + N V W II GF++NG
Sbjct: 371 HVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNG 428
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 109/198 (55%), Gaps = 4/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E G++VH VS F D + + LI MYS CG ++R+FD + ++ WN++++
Sbjct: 406 LEGGRQVHA-VSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMA 464
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G + N L + + F ++ + + P F++ V+ C ++ + G VH A+ G +
Sbjct: 465 GLSLNSLDKEAFTFFKKMR-EKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYM 523
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
D FV +ALI MY KC V+ +F++M +N V+WN +I G+++NG E+ L M
Sbjct: 524 NDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDM 583
Query: 293 MGCEEGFIPDVITVVTVL 310
+G E PD IT V VL
Sbjct: 584 IGSGEK--PDGITFVAVL 599
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 104/193 (53%), Gaps = 4/193 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ C +K GK +H + S + S+D ++ RLI Y+ C SRR+FD + R
Sbjct: 11 LLQTCIDKKAHLAGKLIHAHMLRS-RLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKR 69
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIK--ACGGIADVGFGS 220
+++ WNA++ + K D +F E+ + + N + + ACG + DV G
Sbjct: 70 DIYTWNAILGAYCKASELEDAHVLFAEMP-ERNIVSWNTLISALTRNGACGALVDVECGR 128
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
HG++ K+GL +++V NAL+ MY KC + + ++ F +PE N VS+ +++ G +++
Sbjct: 129 RCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSD 188
Query: 281 FSCESFDLLIKMM 293
E+F L M+
Sbjct: 189 QVNEAFRLFRLML 201
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 88/158 (55%), Gaps = 3/158 (1%)
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
R++FD + + +L WN ++SG+++NE + + + +F E+ + + PD T ++ + G
Sbjct: 344 RQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRS-VHPDRTTLAIILSSLAG 402
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
+ + G VH ++ K D+++++ LI MY KC VE ++F+ + E ++V WNS+
Sbjct: 403 MMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSM 462
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ G S N E+F KM E+G P + TVL
Sbjct: 463 MAGLSLNSLDKEAFTFFKKMR--EKGMFPSQFSYATVL 498
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
ACG D+E G+R H +S N+ + L+ MY+ C D+ + F + N
Sbjct: 117 ACGALVDVECGRRCHG-ISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEV 175
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGF----- 218
+ A++ G ++ + +F L + D+ + V+ C GG + G
Sbjct: 176 SFTAMMGGLADSDQVNEAFRLF-RLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSND 234
Query: 219 -------GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
G VH + K G D+ ++N+L+ MY K ++ +F MPE ++VSWN
Sbjct: 235 VLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNV 294
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+I G+ + S ++ + L +M GF PD IT V +L
Sbjct: 295 MIAGYGQKSQSSKAIEYLQRMQ--YHGFEPDEITYVNML 331
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C + G++VH + A + ND + + LI MYS CG +R VFD + +
Sbjct: 497 VLSCCAKLSSLSQGRQVHSQI-AREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGK 555
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
N WN ++ G+ +N + + ++ ++ E KPD TF V+ AC G+ D G
Sbjct: 556 NTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGE-KPDGITFVAVLTACSHSGLVDTGIKI 614
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ M + G+ V +I G+ + E L + MP
Sbjct: 615 -FNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMP 655
>gi|255540253|ref|XP_002511191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550306|gb|EEF51793.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 538
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 107/194 (55%), Gaps = 8/194 (4%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
L+ AC + I KRV + S F D + R++ + CG + +R+ FD +
Sbjct: 175 ALVSACIGLRSIPGVKRVLNYM-LSNGFEPDQYMANRVLLVQVKCGMMIHARKWFDEMPE 233
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFV---ELSSDTELKPDNFTFPCVIKACGGIADVGF 218
RNL WN ++SG Y + +F+ E SD + TF +I+A G+ +
Sbjct: 234 RNLVSWNTIISGLVDMGDYKEAFRLFLIMWEEFSDAGSR----TFATMIQASAGLGWISI 289
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G +H A KM + D+FVS ALI MYGKC +E+ +F+ MPERN+V+WN+II G++
Sbjct: 290 GRQLHSCALKMEVGDDIFVSCALIDMYGKCGSIEDAHCVFDEMPERNIVAWNTIIAGYAL 349
Query: 279 NGFSCESFDLLIKM 292
+G+S E+ D++ +M
Sbjct: 350 HGYSEEALDMVYEM 363
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 111/210 (52%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
++QA I IG+++H + + +D ++ LI MY CG D+ VFD +
Sbjct: 275 ATMIQASAGLGWISIGRQLHS-CALKMEVGDDIFVSCALIDMYGKCGSIEDAHCVFDEMP 333
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN+ WN +++G+ + + L + E+ ++ ++ D+FTF V++ C +A + +
Sbjct: 334 ERNIVAWNTIIAGYALHGYSEEALDMVYEMR-NSGVRMDHFTFSIVVRICARLASLNYAK 392
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H + G D+ ++AL+ Y K VE +F+ MP +N++SWN++I G+ +G
Sbjct: 393 QAHASLLRHGFGSDIVANSALVDFYSKWGRVETARHVFDQMPCKNVISWNALIAGYGNHG 452
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L +M+ +E P+ +T + VL
Sbjct: 453 KGDDAIELFEQML--QERIRPNHVTFLAVL 480
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%)
Query: 180 YTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSN 239
Y + L +F L D + T+ ++ AC G+ + V G D +++N
Sbjct: 150 YREALELFEILELDGGFDVGSSTYDALVSACIGLRSIPGVKRVLNYMLSNGFEPDQYMAN 209
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
++ + KC + K F+ MPERNLVSWN+II G + G E+F L + M
Sbjct: 210 RVLLVQVKCGMMIHARKWFDEMPERNLVSWNTIISGLVDMGDYKEAFRLFLIM 262
>gi|255570402|ref|XP_002526160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534537|gb|EEF36236.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 762
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 115/224 (51%), Gaps = 7/224 (3%)
Query: 90 NLHNADLKEAT---GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC 146
N+ A +K G +L A D++ G VH SN ++ + LI MY+ C
Sbjct: 175 NMRKAGIKSTRSTLGSVLSAIASLTDLDFGLLVHAEAIKQGLDSNVYV-GSSLINMYAKC 233
Query: 147 GFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCV 206
+++VFD + RN+ WNA+V G+ +N +V+ + + S PD FT+ +
Sbjct: 234 KELEAAKKVFDPIDERNVVLWNAMVGGYAQNGYAHEVIELLSNMKS-CGFHPDEFTYTSI 292
Query: 207 IKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNL 266
+ AC + V G +H + K ++FV NALI MY K F+E+ K FE+M R+
Sbjct: 293 LSACACLEHVEGGRQLHSIIIKNKFASNLFVGNALIDMYAKSGFLEDARKQFELMKSRDN 352
Query: 267 VSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
VSWN+II G+ + E+F + KM G +PD +++ ++L
Sbjct: 353 VSWNAIIVGYVQEEDEVEAFLMFQKMHLV--GILPDEVSLASIL 394
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 112/211 (53%), Gaps = 7/211 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELV-SASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL CG + + +G ++H L+ Q+ +DF+ L+ MY D+R +F
Sbjct: 493 LLDGCGGPEQLILGIQIHCLILKRGLQYDDDFL-GVSLLGMYVKSLRKTDARILFSEFSN 551
Query: 162 -RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
++ W A++SG +N + L + E+ S L PD TF V++AC ++ +G G
Sbjct: 552 PKSTILWTAMISGLAQNNCSDEALQFYQEMRSCNAL-PDQATFVSVLRACAVLSSIGDGR 610
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN-LVSWNSIICGFSEN 279
+H + + GL D +ALI MY KC V +++FE M +N ++SWNS+I GF++N
Sbjct: 611 EIHSLIFRTGLDLDESTCSALIDMYAKCGDVRSSMQVFEDMHSKNDVISWNSMIVGFAKN 670
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G++ + + +M + IPD +T + VL
Sbjct: 671 GYAENALRIFNEMK--QAHVIPDDVTFLGVL 699
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 110/208 (52%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + +E G+++H ++ +F+++ + LI MY+ GF D+R+ F+ +K+R
Sbjct: 292 ILSACACLEHVEGGRQLHSII-IKNKFASNLFVGNALIDMYAKSGFLEDARKQFELMKSR 350
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA++ G+ + E + +F ++ + PD + ++ AC + G +
Sbjct: 351 DNVSWNAIIVGYVQEEDEVEAFLMFQKMHL-VGILPDEVSLASILSACANVEGFEQGKPI 409
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H ++ K GL ++ ++LI MY KC V K+ + MPE ++VS N++I G++
Sbjct: 410 HCLSVKSGLETSLYAGSSLIDMYAKCGDVGSAQKILKSMPEHSVVSINALIAGYAPVNLE 469
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L KM EG P IT ++L
Sbjct: 470 -EAIILFEKMQA--EGLNPSEITFASLL 494
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 3/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + +I Y G D+ +F + N+ WN ++SG + T + +F +
Sbjct: 118 DQVAFVTVINAYVALGRLDDALGLFFQMPNPNVVAWNVMISGHAQRGHETKSIELFCNMR 177
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+K T V+ A + D+ FG VH A K GL +V+V ++LI MY KC +
Sbjct: 178 K-AGIKSTRSTLGSVLSAIASLTDLDFGLLVHAEAIKQGLDSNVYVGSSLINMYAKCKEL 236
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E K+F+ + ERN+V WN+++ G+++NG++ E +LL M C GF PD T ++L
Sbjct: 237 EAAKKVFDPIDERNVVLWNAMVGGYAQNGYAHEVIELLSNMKSC--GFHPDEFTYTSIL 293
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 77/171 (45%), Gaps = 23/171 (13%)
Query: 57 NNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGV-LLQACGHEKDIEI 115
NN S + L F QE+ + NA +AT V +L+AC I
Sbjct: 568 NNCSDEALQFYQEMRSC-------------------NALPDQATFVSVLRACAVLSSIGD 608
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN-LFQWNALVSGF 174
G+ +H L+ T D + LI MY+ CG S +VF+ + ++N + WN+++ GF
Sbjct: 609 GREIHSLI-FRTGLDLDESTCSALIDMYAKCGDVRSSMQVFEDMHSKNDVISWNSMIVGF 667
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
KN + L IF E+ + PD+ TF V+ AC V G + M
Sbjct: 668 AKNGYAENALRIFNEMKQ-AHVIPDDVTFLGVLTACSHAGRVSEGRQIFDM 717
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 39/193 (20%)
Query: 101 GVLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
++L C +E G+ VH +V +FS+ F + LI MY+ D RRVFD
Sbjct: 22 AIVLSGCARLDSVEFGRLVHCNVVKLGFEFSS-FCVGA-LIDMYAKNNRMSDCRRVFDGG 79
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+ + W +L++G+ K L + L +F ++ +PD F VI
Sbjct: 80 VSLDTVSWTSLIAGYVKAGLPEEALEVFEQMKK-VGREPDQVAFVTVI------------ 126
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
NA +A+ G+ +++ + LF MP N+V+WN +I G ++
Sbjct: 127 -------------------NAYVAL-GR---LDDALGLFFQMPNPNVVAWNVMISGHAQR 163
Query: 280 GFSCESFDLLIKM 292
G +S +L M
Sbjct: 164 GHETKSIELFCNM 176
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
P+ FTF V+ C + V FG VH K+G F ALI MY K + + ++
Sbjct: 16 PNEFTFAIVLSGCARLDSVEFGRLVHCNVVKLGFEFSSFCVGALIDMYAKNNRMSDCRRV 75
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ + VSW S+I G+ + G E+ ++ +M + G PD + VTV+
Sbjct: 76 FDGGVSLDTVSWTSLIAGYVKAGLPEEALEVFEQMK--KVGREPDQVAFVTVI 126
>gi|15228117|ref|NP_181268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216848|sp|Q9ZUT5.1|PP191_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37310
gi|4056485|gb|AAC98051.1| hypothetical protein [Arabidopsis thaliana]
gi|110741249|dbj|BAF02175.1| hypothetical protein [Arabidopsis thaliana]
gi|330254288|gb|AEC09382.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 103/188 (54%), Gaps = 11/188 (5%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE-- 189
D + ++LI+ Y+ + VFD + RN F +NAL+ +T E+Y D S+F+
Sbjct: 56 DNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWI 115
Query: 190 ----LSSDTELKPDNFTFPCVIKACGGIADVGFGS---GVHGMAAKMGLIGDVFVSNALI 242
SSD +PD+ + CV+KA G D GS VHG + G DVFV N +I
Sbjct: 116 GSSCYSSDAA-RPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMI 174
Query: 243 AMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
Y KC +E K+F+ M ER++VSWNS+I G+S++G + + M+ C + F P+
Sbjct: 175 TYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSD-FKPN 233
Query: 303 VITVVTVL 310
+TV++V
Sbjct: 234 GVTVISVF 241
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 97/178 (54%), Gaps = 1/178 (0%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
+ ++VH V F +D + +IT Y+ C +R+VFD + R++ WN+++SG+
Sbjct: 150 LARQVHGFV-IRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGY 208
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
+++ + D ++ + + ++ KP+ T V +ACG +D+ FG VH + + D
Sbjct: 209 SQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMD 268
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ + NA+I Y KC ++ LF+ M E++ V++ +II G+ +G E+ L +M
Sbjct: 269 LSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEM 326
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 106/242 (43%), Gaps = 41/242 (16%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ QACG D+ G VH+ + D + +I Y+ CG +R +FD + +
Sbjct: 240 VFQACGQSSDLIFGLEVHKKM-IENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK 298
Query: 163 N-------------------------------LFQWNALVSGFTKNELYTDVLSIFVELS 191
+ L WNA++SG +N + +V++ F E+
Sbjct: 299 DSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMI 358
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+P+ T ++ + +++ G +H A + G +++V+ ++I Y K F+
Sbjct: 359 R-CGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFL 417
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFS---CESFDLLIKMMGCEEGFIPDVITVVT 308
++F+ +R+L++W +II ++ +G S C FD M C G PD +T+
Sbjct: 418 LGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFD----QMQC-LGTKPDDVTLTA 472
Query: 309 VL 310
VL
Sbjct: 473 VL 474
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 119/285 (41%), Gaps = 37/285 (12%)
Query: 41 RSIFKE---KSSLSLSAKTNNASTQGLHFLQEITTLCEESKSL-----NKALSLLQENLH 92
R++F E K S++ A + GL ++E L E +S+ N +S L +N H
Sbjct: 289 RALFDEMSEKDSVTYGAIISGYMAHGL--VKEAMALFSEMESIGLSTWNAMISGLMQNNH 346
Query: 93 NADLKEATGVLLQACG----------------HEKDIEIGKRVHELVSASTQFSNDFIIN 136
+ ++ + +++ CG + +++ GK +H + N+ +
Sbjct: 347 HEEVINSFREMIR-CGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAF-AIRNGADNNIYVT 404
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
T +I Y+ GF L ++RVFD+ K R+L W A+++ + + S+F ++
Sbjct: 405 TSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQC-LGT 463
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
KPD+ T V+ A D + M K + V ++++ + + + +
Sbjct: 464 KPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAM 523
Query: 256 KLFEVMPERNLVS-WNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
+ MP + W +++ G S G DL I C+ F
Sbjct: 524 EFISKMPIDPIAKVWGALLNGASVLG------DLEIARFACDRLF 562
>gi|302755875|ref|XP_002961361.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
gi|300170020|gb|EFJ36621.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
Length = 1121
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 113/215 (52%), Gaps = 11/215 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSND-------FIINTRLITMYSLCGFPLDSRRV 155
LL+ CG D+ GKR+H + S +D F+ N L+ MY CG +++R
Sbjct: 128 LLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNC-LVQMYGKCGRTDEAQRA 186
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
FDS+ +N+F W +++ + L+ L F ++ ++PD F + CG +
Sbjct: 187 FDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIK-AGVEPDRLVFLAALNVCGILKR 245
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
+ G+G+H L D+ + NAL++MYGKC ++ +LF+ + RN++SW ++
Sbjct: 246 LEDGAGIHRQIQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILVSV 305
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ENG E++ LL M EG PD + ++T+L
Sbjct: 306 FAENGRRRETWGLLRSM--AVEGIKPDKVLLLTLL 338
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 18/222 (8%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSND-------FIINTRLITMYSLCGFPLDSRRV 155
LL+ CG D+ GKR+H + S +D F+ N L+ MY CG +++R
Sbjct: 20 LLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNC-LVQMYGKCGRTDEAQRA 78
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
FDS+ +N+F W +++ + L+ L F ++ ++PD + ++K CG + D
Sbjct: 79 FDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIK-AGVEPDRLVYARLLKECGRLGD 137
Query: 216 VGFGSGVHGMAAKMGLI-------GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS 268
+ G +H + GL+ G F+ N L+ MYGKC +E + F+ + +N+ S
Sbjct: 138 LAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNIFS 197
Query: 269 WNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
W SI+ + G ++ + +M+ + G PD + + L
Sbjct: 198 WTSILVAYFHAGLHAQALERFHQMI--KAGVEPDRLVFLAAL 237
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 9/185 (4%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN---LFQWNALVSGFTKNELYTDVLS 185
+ ++ T L++M++ CG +R +F+ + + + WNA+++ + + L
Sbjct: 363 LDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALF 422
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
+ L +KP+ TF + AC + D G +H + + G +V V+NAL+ MY
Sbjct: 423 LLDSLQLQG-VKPNCITFISSLGACSSLQD---GRALHLLIHESGFDQEVSVANALVTMY 478
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
GKC + + KLF M E++L SWNS I S +G S E LL +M G EGF+ + +T
Sbjct: 479 GKCGSLLDSAKLFSEMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRG--EGFLYEKVT 536
Query: 306 VVTVL 310
+T L
Sbjct: 537 FLTAL 541
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 8/211 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L CG K +E G +H + +D I L++MY CG ++ +FD L+ RN
Sbjct: 237 LNVCGILKRLEDGAGIHRQIQ-DKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRN 295
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV- 222
+ W LVS F +N + + ++ + +KPD ++ C + S +
Sbjct: 296 VISWTILVSVFAENGRRRETWGLLRSMAVEG-IKPDKVLLLTLLNVCSSRGVLDEDSWMA 354
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN---LVSWNSIICGFSEN 279
H GL + V+ AL++M+ +C V++ ++FE + + + + WN++I ++
Sbjct: 355 HDYIVGGGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHR 414
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G S E+ LL + +G P+ IT ++ L
Sbjct: 415 GCSKEALFLLDSLQ--LQGVKPNCITFISSL 443
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 91/183 (49%), Gaps = 4/183 (2%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDV-LSIF 187
++ ++ LI M+S +R +FD +++ +++ + K E + L++F
Sbjct: 668 LESETMVANSLIEMFSEFRSLSQARAIFDRNPEKSVALHTTMLAAYVKGERGKEAALTLF 727
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+ + L+P + T + ACGG+AD VH A ++GL + V+N L+ MYGK
Sbjct: 728 ARMLLEG-LEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGK 786
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
V+ +F+ RN+ +WN++ + + G + L+ M +G+ PD +T V
Sbjct: 787 AGDVDTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQ--RDGYRPDSVTFV 844
Query: 308 TVL 310
++L
Sbjct: 845 SLL 847
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 100/207 (48%), Gaps = 7/207 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC +D G+ +H L+ S F + + L+TMY CG LDS ++F + ++
Sbjct: 443 LGACSSLQD---GRALHLLIHESG-FDQEVSVANALVTMYGKCGSLLDSAKLFSEMAEKD 498
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L WN+ ++ + + + + + ++ + L + TF + +C A + G +H
Sbjct: 499 LASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLY-EKVTFLTALNSCTDPASLQDGVLMH 557
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ G D V++A+I MYG+C ++ ++F + +++ W ++ + + G +
Sbjct: 558 EKIVQCGYEADTVVASAVINMYGRCGGLDRAREIFTRVKTFDVILWTGMLTVYCQLGRTK 617
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + M+ EG P +T+V ++
Sbjct: 618 QVMEHFRSML--HEGLKPTGVTLVNLI 642
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 98/213 (46%), Gaps = 13/213 (6%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L +C ++ G +HE + + D ++ + +I MY CG +R +F +KT +
Sbjct: 541 LNSCTDPASLQDGVLMHEKI-VQCGYEADTVVASAVINMYGRCGGLDRAREIFTRVKTFD 599
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF----- 218
+ W +++ + + V+ F + + LKP T +I +AD G
Sbjct: 600 VILWTGMLTVYCQLGRTKQVMEHFRSMLHEG-LKPTGVTLVNLITC---VADSGLEHFRD 655
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G + +A + GL + V+N+LI M+ + + + +F+ PE+++ +++ + +
Sbjct: 656 GVWISSLAWESGLESETMVANSLIEMFSEFRSLSQARAIFDRNPEKSVALHTTMLAAYVK 715
Query: 279 NGFSCE-SFDLLIKMMGCEEGFIPDVITVVTVL 310
E + L +M+ EG P +T+VT +
Sbjct: 716 GERGKEAALTLFARML--LEGLEPSSVTLVTAM 746
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ ACG D KRVHE S + N L+ MY G +R +FD RN
Sbjct: 746 MSACGGLADPSSSKRVHERARELGLESETCVANG-LVDMYGKAGDVDTARYIFDRALRRN 804
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+ WNA+ + + + VL + + D +PD+ TF ++ CG
Sbjct: 805 VTTWNAMAGAYRQCGVTRGVLWLVRTMQRDG-YRPDSVTFVSLLSVCG 851
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 114/210 (54%), Gaps = 3/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L +C ++G+++H LV T F + + + L+ MY+ G ++RRVFD L
Sbjct: 115 ATVLTSCTSSSGFQLGRQIHSLV-IKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 173
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ A++SG+ + L + L +F L + ++ + T+ V+ A G+A + G
Sbjct: 174 ERDVVSCTAIISGYAQLGLDEEALDLFRRLQREG-MRSNYVTYASVLTALSGLAALDHGR 232
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH + L V + N+LI MY KC + ++F+ MPER ++SWN+++ G+S++G
Sbjct: 233 QVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHG 292
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L K+M E PD +T + VL
Sbjct: 293 LGREAVELF-KLMKEENKVKPDSVTFLAVL 321
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C + I G+RVH + T + + TRLI +Y+ C D+RRV D + R
Sbjct: 16 VLTECISQTAIREGQRVHAHM-IKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 74
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVE-LSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
N+ W A++SG+++ ++ L +FVE L S T P+ FTF V+ +C + G
Sbjct: 75 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGT--APNEFTFATVLTSCTSSSGFQLGRQ 132
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H + K +FV ++L+ MY K + E ++F+ +PER++VS +II G+++ G
Sbjct: 133 IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGL 192
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL ++ EG + +T +VL
Sbjct: 193 DEEALDLFRRLQ--REGMRSNYVTYASVL 219
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 8/173 (4%)
Query: 113 IEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
++ G++VH ++ A F ++ LI MYS CG SRR+FDS+ R + WNA++
Sbjct: 228 LDHGRQVHSHVLRAKLPFY--VVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAML 285
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKM 229
G++K+ L + + +F + + ++KPD+ TF V+ C GG+ D G + K
Sbjct: 286 VGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKD 345
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII--CGFSEN 279
G ++ ++ ++G+ VEE + + MP E W S++ C +N
Sbjct: 346 GFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQN 398
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 203 FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ V+ C + G VH K V++ LI +Y KC + + ++ + MP
Sbjct: 13 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72
Query: 263 ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
ERN+VSW ++I G+S+ G++ E+ L ++M+ G P+ T TVL
Sbjct: 73 ERNVVSWTAMISGYSQRGYASEALHLFVEML--MSGTAPNEFTFATVL 118
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+AC K + K++H+ +T ++ +++ +L +Y C + +RR+FD +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLH-KLTRLYLSCNQVVLARRLFDEIPNP 72
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN ++ + N + + ++ + ++P+ +T+P V+KAC G+ + G +
Sbjct: 73 SVILWNQIIRAYAWNGPFDGAIDLYHSMLH-LGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A GL DVFV AL+ Y KC + E +LF M R++V+WN++I G S G
Sbjct: 132 HSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ L+++M EEG P+ T+V VLP
Sbjct: 192 DDAVQLIMQMQ--EEGICPNSSTIVGVLP 218
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 3/175 (1%)
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
++ ++ + C L +R++FD + RN W+A++ G+ ++ + L IF + +
Sbjct: 210 SSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIF-RMMQLSG 268
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
+ PD T V+ AC +A + G HG G D + NALI MY KC +
Sbjct: 269 IDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAR 328
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F M ++VSWN++I G+ +G E+ L ++ G PD IT + +L
Sbjct: 329 EVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLAL--GLKPDDITFICLL 381
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 5/183 (2%)
Query: 93 NADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDS 152
+ DL GVL AC H ++ G H + F+ D +I LI MYS CG +
Sbjct: 270 DPDLTTMLGVL-PACSHLAALQHGFCSHGYLIVRG-FATDTLICNALIDMYSKCGKISFA 327
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
R VF+ + ++ WNA++ G+ + L + L +F +L + LKPD+ TF C++ +C
Sbjct: 328 REVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLA-LGLKPDDITFICLLSSCSH 386
Query: 213 IADVGFGS-GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWN 270
V G M+ ++ + ++ + G+ ++E MP E ++ W+
Sbjct: 387 SGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWS 446
Query: 271 SII 273
+++
Sbjct: 447 ALL 449
>gi|302817750|ref|XP_002990550.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
gi|300141718|gb|EFJ08427.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
Length = 917
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 106/208 (50%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C D+ GK +H V + ++ T LI MY CG D+RRVFD L +
Sbjct: 109 VLDGCTATGDLSRGKLLHGFV-LEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQ 167
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +++ + +++ + L +F + L P+ T+ I AC + + G +
Sbjct: 168 DVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVL-PNRITYATAISACAHVESMADGKLI 226
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G DV VS A++ MYGKC +E+ ++FE MP N VSWN+I+ +++G
Sbjct: 227 HSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCC 286
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + M + G PD +T +T+L
Sbjct: 287 VEAL-WYFQRMQLQGGSTPDKVTFITIL 313
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 3/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ AC H + + GK +H V F +D +++ ++ MY CG D+R VF+ + N
Sbjct: 211 ISACAHVESMADGKLIHSQV-LEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPN 269
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WNA+V+ T++ + L F + PD TF ++ AC A + FG ++
Sbjct: 270 TVSWNAIVAACTQHGCCVEALWYFQRMQLQGGSTPDKVTFITILNACSSPATLTFGELLY 329
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ G + V N ++ MY C ++ F M ER+ +SWN+II G ++ GF
Sbjct: 330 ECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCD 389
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M+ EG PD T ++++
Sbjct: 390 EAVHLFRRMLA--EGITPDKFTFISII 414
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL C + I G+ VH V AS +F D ++ I MY CG D+ VF SL
Sbjct: 8 LLGLCAKKSAIAEGRFVHSRVEAS-EFRRDDLVQNATIHMYGKCGCVEDAVTVFQSLDHP 66
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN+L++ F ++ + IF + L PD TF V+ C D+ G +
Sbjct: 67 SQVSWNSLLAAFARDGQFQQAFQIFQRMKLQG-LAPDRITFVTVLDGCTATGDLSRGKLL 125
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + GL +V V +LI MYGKC VE+ ++F+ + +++VSW S+I + ++
Sbjct: 126 HGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRC 185
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L +M G +P+ IT T +
Sbjct: 186 VEALELFHRMR--PSGVLPNRITYATAI 211
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 8/207 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + GK +H + F+ + LI MY+ CG ++ VF +N
Sbjct: 512 LNACASLTALSEGKLIHSH-AIERGFAASPAVGNALINMYAKCGCLEEADLVFHQCG-KN 569
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L WN + + + + + + + L +F E+ + LK D +F V+ C ++ GS +H
Sbjct: 570 LVSWNTIAAAYVQRDKWREALQLFQEMQLEG-LKADKVSFVTVLNGCSSASE---GSKIH 625
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ + G+ D VS AL+ MY ++E ++F M R++VSWN++I G +E+G S
Sbjct: 626 NILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSR 685
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + +M EG PD I+ VTVL
Sbjct: 686 EAIQMFQRMQ--LEGVAPDKISFVTVL 710
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 103/197 (52%), Gaps = 6/197 (3%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G ++H ++ T +D I++T L+ MY+ ++ R+F ++ R++ WNA+++G
Sbjct: 621 GSKIHNIL-LETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKA 679
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG--VHGMAAKMGLIG 233
++ L + + +F + + + PD +F V+ A G + V + + G
Sbjct: 680 EHGLSREAIQMFQRMQLEG-VAPDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYET 738
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
D V NA+++M+G+ + E + FE + ER+ SWN I+ +++G ++ L +M
Sbjct: 739 DTIVGNAIVSMFGRSGRLAEARRAFERIRERDAASWNVIVTAHAQHGEVEQALKLFRRMQ 798
Query: 294 GCEEGFIPDVITVVTVL 310
+E PD IT+V+VL
Sbjct: 799 --QESSRPDSITLVSVL 813
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 86/179 (48%), Gaps = 4/179 (2%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + + LI M+S G ++R +FD +K R++ W +++S + ++ D L L
Sbjct: 438 DVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGC-TRLM 496
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
L ++FT + AC + + G +H A + G V NALI MY KC +
Sbjct: 497 RLEGLMGNDFTLVTALNACASLTALSEGKLIHSHAIERGFAASPAVGNALINMYAKCGCL 556
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
EE +F +NLVSWN+I + + E+ L +M EG D ++ VTVL
Sbjct: 557 EEADLVFH-QCGKNLVSWNTIAAAYVQRDKWREALQLFQEMQ--LEGLKADKVSFVTVL 612
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 104/213 (48%), Gaps = 17/213 (7%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + G+ ++E + + I+ ++TMYS CG ++ F ++ R
Sbjct: 312 ILNACSSPATLTFGELLYECI-LQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVER 370
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN ++SG + + + +F + ++ + PD FTF +I G A + +
Sbjct: 371 DAISWNTIISGHAQAGFCDEAVHLFRRMLAEG-ITPDKFTFISIID---GTARMQEAKIL 426
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ + G+ DVF+ +ALI M+ + V E LF+ M +R++V W SII + ++G S
Sbjct: 427 SELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSS 486
Query: 283 CESFDLLIKMMGCE-----EGFIPDVITVVTVL 310
++ +GC EG + + T+VT L
Sbjct: 487 DDA-------LGCTRLMRLEGLMGNDFTLVTAL 512
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D TF ++ C + + G VH D V NA I MYGKC VE+ V +F
Sbjct: 1 DRGTFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVF 60
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + + VSWNS++ F+ +G ++F + +M +G PD IT VTVL
Sbjct: 61 QSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMK--LQGLAPDRITFVTVL 110
>gi|255586231|ref|XP_002533770.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526307|gb|EEF28615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 617
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 81 NKALSLLQE-NLHNADLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
N+A+ L +E N T ++L +C + +E GK+VH +S F D + +
Sbjct: 399 NEAIKLFREMQFQNVKPDRTTLAIILSSCAGMELLEAGKQVHA-ISQKAAFHEDIYVASG 457
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI MYS CG + +F + ++ WN++++G + N L + L+ F ++ + + P
Sbjct: 458 LIGMYSKCGKMDIADCIFKKISKQDTVCWNSMIAGLSLNSLDNEALAFFQQMRQ-SGMSP 516
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
F++ ++ C ++ + G +H AK G + DV+V +AL+ MY KC V E + F
Sbjct: 517 TQFSYATILSCCAKLSSLIHGKQIHAQIAKEGFVNDVYVGSALVDMYCKCGEVGEARQFF 576
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
++M +N V+WN +I G+++NG E+ L M+
Sbjct: 577 DIMSSKNTVTWNEMIHGYAQNGHGHEAVCLYRDMI 611
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 96/172 (55%), Gaps = 3/172 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
++T Y G ++ R+F + RN+ WN L+S + L L ++ E+ + L P
Sbjct: 78 ILTEYCKAGNLQNAHRLFSEMPERNIVSWNNLISALVRGRLEQQALDVYNEMIWEG-LMP 136
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+FT ++ ACG + ++ G H + K+GL +V+VSNAL+++Y KC V + V+LF
Sbjct: 137 THFTLASILSACGTLLNMESGRKCHTLIVKIGLDNNVYVSNALLSVYSKCGLVRDAVRLF 196
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E M E N V++ +++ GF++ E+ ++ M C +G D +++ +VL
Sbjct: 197 EEMQEPNEVTYTAMMSGFTQTDRVVEALEMFRLM--CRQGICIDSVSLSSVL 246
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 114/219 (52%), Gaps = 15/219 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG ++E G++ H L+ N+ ++ L+++YS CG D+ R+F+ ++
Sbjct: 144 ILSACGTLLNMESGRKCHTLI-VKIGLDNNVYVSNALLSVYSKCGLVRDAVRLFEEMQEP 202
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADV---- 216
N + A++SGFT+ + + L +F L + D+ + V+ C GG +
Sbjct: 203 NEVTYTAMMSGFTQTDRVVEALEMF-RLMCRQGICIDSVSLSSVLGVCTKGGCGESDQSD 261
Query: 217 -----GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
G HG+A K+G D+ + N+L+ MY K ++ ++F +PE ++VSWN
Sbjct: 262 GSLRNALGKLAHGLAIKLGFESDLHLCNSLLDMYAKDGDMDSAEEVFANLPEMSVVSWNV 321
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+I G+ + S ++ + L +M C GF PD +T + +L
Sbjct: 322 MIAGYGQKCKSGKAIEYLQRMQSC--GFEPDEVTYINML 358
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 8/206 (3%)
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNL 164
Q C K IE +R+ S F D + ++T G R++FD + +
Sbjct: 328 QKCKSGKAIEYLQRMQ-----SCGFEPDEVTYINMLTACVRSGDIEIGRQIFDCMACPGV 382
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
WN ++SG+ + E + + + +F E+ +KPD T ++ +C G+ + G VH
Sbjct: 383 SSWNGMLSGYFQIENHNEAIKLFREMQFQN-VKPDRTTLAIILSSCAGMELLEAGKQVHA 441
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCE 284
++ K D++V++ LI MY KC ++ +F+ + +++ V WNS+I G S N E
Sbjct: 442 ISQKAAFHEDIYVASGLIGMYSKCGKMDIADCIFKKISKQDTVCWNSMIAGLSLNSLDNE 501
Query: 285 SFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +M + G P + T+L
Sbjct: 502 ALAFFQQMR--QSGMSPTQFSYATIL 525
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 18/126 (14%)
Query: 188 VELSSDTEL--KPDNFTFPCVIKACGGIADVGFGSGV-HGMAAKMGLIGDVFVSNALIAM 244
+ LS+DT L + F F C ++G+ + H M K +++ NA++
Sbjct: 35 IGLSTDTFLLNRLIEFYFKC--------KNMGYAHNLFHQMPHK-----NIYSWNAILTE 81
Query: 245 YGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVI 304
Y K ++ +LF MPERN+VSWN++I ++ D+ +M+ EG +P
Sbjct: 82 YCKAGNLQNAHRLFSEMPERNIVSWNNLISALVRGRLEQQALDVYNEMIW--EGLMPTHF 139
Query: 305 TVVTVL 310
T+ ++L
Sbjct: 140 TLASIL 145
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G +H ++GL D F+ N LI Y KC + LF MP +N+ SWN+I+ + +
Sbjct: 25 GKLLHARIFRIGLSTDTFLLNRLIEFYFKCKNMGYAHNLFHQMPHKNIYSWNAILTEYCK 84
Query: 279 NG 280
G
Sbjct: 85 AG 86
>gi|413943774|gb|AFW76423.1| hypothetical protein ZEAMMB73_944105 [Zea mays]
Length = 446
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 120/245 (48%), Gaps = 40/245 (16%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC G++VH + + +D ++N L+ MY+ CG ++R +FDS+ +R
Sbjct: 16 VMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSR 75
Query: 163 -------------------------------NLFQWNALVSGFTKNELYTDVLSIFVELS 191
N+ WN L++ + +N + + +FV+L
Sbjct: 76 SVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLK 135
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVH------GMAAKMGLIGDVFVSNALIAMY 245
D+ + P ++T+ V+ ACG IA + G H G G DVFV N+L+ MY
Sbjct: 136 RDS-IWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMY 194
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
K +++ K+FE M R+ VSWN++I G+++NG + ++ L +M+ E PD +T
Sbjct: 195 LKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNEN--PDSVT 252
Query: 306 VVTVL 310
++ VL
Sbjct: 253 MIGVL 257
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
PD T V+ AC G+A G VH M + L D+ ++NAL+ MY KC E
Sbjct: 8 PDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARC 67
Query: 257 LFEVMPERNLVSWNSIICGFSENG 280
+F+ MP R++VS SI+ G++++
Sbjct: 68 IFDSMPSRSVVSETSILAGYAKSA 91
>gi|302796767|ref|XP_002980145.1| hypothetical protein SELMODRAFT_112044 [Selaginella moellendorffii]
gi|300152372|gb|EFJ19015.1| hypothetical protein SELMODRAFT_112044 [Selaginella moellendorffii]
Length = 434
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 112/205 (54%), Gaps = 4/205 (1%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
+C + ++ G+ H AS F D + L+ MYS CG ++R+VFDS+ R
Sbjct: 123 SCSWQGNLGTGRLFHRRAIASG-FHTDESLKNSLVNMYSKCGSVEEARQVFDSIAPRTAI 181
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
+ +++ +N Y + L ++ E+ + L+ +N TF +++A + +G G +H
Sbjct: 182 SCSVMITTLAQNGFYREALELYREMQEEG-LESNNMTFLSLLEASANLTALGQGRRIHAS 240
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
GL D+ + AL+ MYGKCA ++E ++FE M +N+V+W SII +S++G ES
Sbjct: 241 IIDYGLARDLLIQTALMYMYGKCAGLDEAREVFESMERKNVVAWTSIIAAYSQHGHCEES 300
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
+L +M +G +P+ +T T+L
Sbjct: 301 LELFRRM--ALDGVMPNEVTYGTLL 323
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 109/209 (52%), Gaps = 5/209 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + + + + E ++A+ D ++ T +++ Y+ CG +R VFD++ RN
Sbjct: 17 LSACAAPELLAQARSIVEKITAAG-MDRDVLVATAVVSAYARCGAIASAREVFDAMPARN 75
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKA--CGGIADVGFGSG 221
+ WNA++ + ++ D +++F L + + + TF +I+A C ++G G
Sbjct: 76 IVSWNAMIEAYAQHGRGADAIAVFRLLELEGTFQANKITFLALIEACSCSWQGNLGTGRL 135
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
H A G D + N+L+ MY KC VEE ++F+ + R +S + +I ++NGF
Sbjct: 136 FHRRAIASGFHTDESLKNSLVNMYSKCGSVEEARQVFDSIAPRTAISCSVMITTLAQNGF 195
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L +M EEG + +T +++L
Sbjct: 196 YREALELYREMQ--EEGLESNNMTFLSLL 222
>gi|357487403|ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
gi|355515324|gb|AES96947.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
Length = 828
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 131/246 (53%), Gaps = 12/246 (4%)
Query: 65 HFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVS 124
H +E+ +L + L+ L+ + ++ TGV ++ +G+++H +
Sbjct: 78 HLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGV--------GELIVGRKLHGRIL 129
Query: 125 ASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVL 184
S F D +I T L+ MY F D+++VFD + R+L W++++S + +N +Y + L
Sbjct: 130 KSG-FCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYREGL 188
Query: 185 SIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAM 244
+F + + ++PD+ V +ACG I + VHG + G++GD +SN+LI M
Sbjct: 189 EMFRSMICEG-IRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVM 247
Query: 245 YGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVI 304
Y +C ++ +LFE + +R+ W S+I +++N E+ D+ IKM E P+ +
Sbjct: 248 YSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSE--VEPNDV 305
Query: 305 TVVTVL 310
T+++VL
Sbjct: 306 TMISVL 311
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 108/198 (54%), Gaps = 5/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
I+ G+++H V F ++F+ N+ L+ MYS CGF + +F+ +K +++ WN ++
Sbjct: 422 IQFGQQIHGHV-MKRGFFDEFVQNS-LMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMIC 479
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
GF++N + + LS+F E+ + L+ + TF I+AC + + G +H G
Sbjct: 480 GFSQNGISVEALSLFDEMFKN-RLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQ 538
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
D+++ AL+ MY KC ++ K+F+ + E+++VSW+++I +G + L KM
Sbjct: 539 NDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQINAATSLFHKM 598
Query: 293 MGCEEGFIPDVITVVTVL 310
+ P+ +T + +L
Sbjct: 599 V--LSNIKPNEVTFMNIL 614
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 104/200 (52%), Gaps = 7/200 (3%)
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNL 164
+ACG + + K VH V + + N+ LI MYS CG+ ++R+F+ + R+
Sbjct: 211 EACGKIGCLRLAKSVHGYVMREGMVGDGSLSNS-LIVMYSQCGYLCRAKRLFECIDDRST 269
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
W +++S + +NE + + L +F+++ D+E++P++ T V+ +C + + G VH
Sbjct: 270 SCWTSMISAYNQNECFEEALDVFIKMQ-DSEVEPNDVTMISVLNSCARLGRLKEGKSVHC 328
Query: 225 MAAK--MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ MG+ G + + ALI Y C + KL + N+VSWN++I ++ G +
Sbjct: 329 FVLRNAMGVTG-LDLGPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLN 387
Query: 283 CESFDLLIKMMGCEEGFIPD 302
E+ M+ +G +PD
Sbjct: 388 DEAMAFFACMVA--KGIMPD 405
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 2/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +C ++ GK VH V + + LI YS C ++ S+
Sbjct: 310 VLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNE 369
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN L+S + + L + ++ F + + + PD+F+ I A + FG +
Sbjct: 370 NIVSWNTLISFYAREGLNDEAMAFFACMVAKG-IMPDSFSLASSISASASSGSIQFGQQI 428
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K G D FV N+L+ MY KC F +F + +++V+WN +ICGFS+NG S
Sbjct: 429 HGHVMKRGFF-DEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGIS 487
Query: 283 CESFDLLIKM 292
E+ L +M
Sbjct: 488 VEALSLFDEM 497
>gi|115438899|ref|NP_001043729.1| Os01g0651100 [Oryza sativa Japonica Group]
gi|113533260|dbj|BAF05643.1| Os01g0651100, partial [Oryza sativa Japonica Group]
Length = 503
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 104/188 (55%), Gaps = 3/188 (1%)
Query: 123 VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTD 182
+SA T F+ D + + ++ MY+ CG D+RR+FD + RN+ W+AL+ G+ +++
Sbjct: 56 LSAKTPFAGDVFVGSSVLDMYAKCGHLADARRLFDEMPKRNVVSWSALICGYADAGMHSA 115
Query: 183 VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALI 242
+ IF L+ + + ++FT C+++ C G+ VH + K L FV ++L+
Sbjct: 116 AMEIF-RLALEEAVPVNDFTVSCILRVCAAATLFELGAQVHARSIKTALNASPFVGSSLV 174
Query: 243 AMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
++Y KC VE ++F PERNL WN+ + +++G + +F + M GF P+
Sbjct: 175 SLYSKCGLVECAYQVFGEAPERNLGIWNAGLNASAQHGHTTAAFQRFMDMQNA--GFRPN 232
Query: 303 VITVVTVL 310
IT ++++
Sbjct: 233 SITFLSLI 240
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG++AK GDVFV ++++ MY KC + + +LF+ MP+RN+VSW+++ICG+++ G
Sbjct: 52 ALHGLSAKTPFAGDVFVGSSVLDMYAKCGHLADARRLFDEMPKRNVVSWSALICGYADAG 111
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ + EE + TV +L
Sbjct: 112 MHSAAMEIF--RLALEEAVPVNDFTVSCIL 139
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 110/207 (53%), Gaps = 3/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+ CG + + GK+VH + A F D + LI MY+ C +VFD + RN
Sbjct: 283 LRVCGALRSRDGGKQVHSKLIACG-FKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERN 341
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WN+++S + + D L +F+ + ++ K + F ++ A G+AD+G G +H
Sbjct: 342 QVTWNSIISAEAQFGHFNDALVLFLRMQ-ESGYKSNRFNLGSILMASAGLADIGKGRELH 400
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G + L D+ + +AL+ MY KC VEE ++F + ERN VS+N+++ G+ + G +
Sbjct: 401 GHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAE 460
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L M E+G PD T T+L
Sbjct: 461 EALELYHDMQS-EDGIQPDQFTFTTLL 486
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 108/210 (51%), Gaps = 3/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L A DI G+ +H + ++D I+ + L+ MYS CG ++ +VF SL
Sbjct: 381 GSILMASAGLADIGKGRELHGHL-VRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLL 439
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN +NAL++G+ + + L ++ ++ S+ ++PD FTF ++ C + G
Sbjct: 440 ERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGR 499
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H + + ++ V L+ MY +C + ++F M ERN SWNS+I G+ +NG
Sbjct: 500 QIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNG 559
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ L +M G PD ++ ++L
Sbjct: 560 ETQEALRLFKQMQ--LNGIKPDCFSLSSML 587
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 117/241 (48%), Gaps = 37/241 (15%)
Query: 102 VLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
LL C ++++ G+++H L+ A+ + + I+ T L+ MYS CG ++ +F+ +
Sbjct: 484 TLLTLCANQRNDNQGRQIHAHLIRAN--ITKNIIVETELVHMYSECGRLNYAKEIFNRMA 541
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN + WN+++ G+ +N + L +F ++ + +KPD F+ ++ +C ++D G
Sbjct: 542 ERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNG-IKPDCFSLSSMLSSCVSLSDSQKGR 600
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKC--------------------------AFV--- 251
+H + + + + L+ MY KC AFV
Sbjct: 601 ELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSG 660
Query: 252 --EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
+ LF+ M +RN WNSI+ G++ G ESF+ ++M+ E DV+T+VT+
Sbjct: 661 RANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEML--ESDIEYDVLTMVTI 718
Query: 310 L 310
+
Sbjct: 719 V 719
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 92/183 (50%), Gaps = 11/183 (6%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ + L+ Y+ G+ D+ D ++ ++ WNA+++G+ K + + IF
Sbjct: 209 NLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIF---- 264
Query: 192 SDTELK----PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
D LK PDNFTF ++ CG + G VH G GD FV NALI MY K
Sbjct: 265 -DRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAK 323
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
C E +K+F+ M ERN V+WNSII ++ G ++ L ++M E G+ + +
Sbjct: 324 CDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQ--ESGYKSNRFNLG 381
Query: 308 TVL 310
++L
Sbjct: 382 SIL 384
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 98/181 (54%), Gaps = 6/181 (3%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE-L 190
D I+N +++ + G D++ +FD ++ RN WN++++G+ L + + F+E L
Sbjct: 645 DVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEML 704
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG-DVFVSNALIAMYGKCA 249
SD E D T ++ C + + G +H + K G + V + AL+ MY KC
Sbjct: 705 ESDIEY--DVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCG 762
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
+ + +F+ M +N+VSWN++I G+S++G S E+ L +M ++G P+ +T + +
Sbjct: 763 AITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEM--PKKGMYPNEVTFLAI 820
Query: 310 L 310
L
Sbjct: 821 L 821
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 107/211 (50%), Gaps = 7/211 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLD---SRRVFDSL 159
L+Q C + GK +H + S ++ D + T+++ +Y+ G D +R++F+ +
Sbjct: 77 LIQDCIDSNSFQRGKSIHTQM-ISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEM 135
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
RNL WN ++ + + + Y +VL ++ + D FTFP VIKAC + D+G
Sbjct: 136 PERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNF-SDKFTFPSVIKACIAMEDMGGV 194
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+ K GL ++FV AL+ Y + ++++ V + + ++V+WN++I G+ +
Sbjct: 195 RQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKI 254
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E++ + +M+ G PD T + L
Sbjct: 255 LSWEEAWGIFDRMLKI--GVCPDNFTFASAL 283
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 94/200 (47%), Gaps = 5/200 (2%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
+ +S N L +L+ ++ L T ++ C +E G ++H L+ + ++
Sbjct: 693 KKESFNHFLEMLESDIEYDVLTMVT--IVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVL 750
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
T L+ MYS CG +R VFD++ +N+ WNA++SG++K+ + L ++ E+
Sbjct: 751 ETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKG- 809
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVH-GMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+ P+ TF ++ AC V G + M + ++ + G+ +E+
Sbjct: 810 MYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDA 869
Query: 255 VKLFEVMP-ERNLVSWNSII 273
+ E MP E + +W +++
Sbjct: 870 KEFVEKMPIEPEVSTWGALL 889
>gi|356536685|ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Glycine max]
Length = 723
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 113/214 (52%), Gaps = 4/214 (1%)
Query: 96 LKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV 155
L G LL AC H K + GK++H V S + I+ +RL+ Y+ +D++ V
Sbjct: 80 LLHPIGSLLLACTHFKSLSQGKQLHAQV-ISLGLDQNPILVSRLVNFYTNVNLLVDAQFV 138
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
+S T + WN L+S + +N + + L ++ + + +++PD +T+P V+KACG D
Sbjct: 139 TESSNTLDPLHWNLLISAYVRNGFFVEALCVYKNML-NKKIEPDEYTYPSVLKACGESLD 197
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
G VH + +FV NAL++MYG+ +E LF+ MP R+ VSWN+II
Sbjct: 198 FNSGLEVHRSIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISC 257
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
++ G E+F L M EEG +VI T+
Sbjct: 258 YASRGIWKEAFQLFGSMQ--EEGVEMNVIIWNTI 289
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 7/272 (2%)
Query: 41 RSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEAT 100
R I+KE L S + + I C S + AL L+ + + L
Sbjct: 261 RGIWKEAFQLFGSMQEEGVEMNVI-IWNTIAGGCLHSGNFRGALQLISQMRTSIHLDAIA 319
Query: 101 GVL-LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
V+ L AC H I++GK +H + T F + LITMYS C + +F
Sbjct: 320 MVVGLNACSHIGAIKLGKEIHGH-AVRTCFDVFDNVKNALITMYSRCRDLGHAFILFHRT 378
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+ + L WNA++SG+ + Y +V +F E+ + ++P+ T V+ C IA++ G
Sbjct: 379 EEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQEG-MEPNYVTIASVLPLCARIANLQHG 437
Query: 220 SGVHGMAAKMGLIGD-VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
H K + + + NAL+ MY + V E K+F+ + +R+ V++ S+I G+
Sbjct: 438 KEFHCYIMKHKQFEEYLLLWNALVDMYSRSGRVLEARKVFDSLTKRDEVTYTSMILGYGM 497
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + L +M C+ PD +T+V VL
Sbjct: 498 KGEGETTLKLFEEM--CKLEIKPDHVTMVAVL 527
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 105/244 (43%), Gaps = 40/244 (16%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG D G VH + AS+ + F+ N L++MY G +R +FD++ R
Sbjct: 188 VLKACGESLDFNSGLEVHRSIEASSMEWSLFVHNA-LVSMYGRFGKLEIARHLFDNMPRR 246
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSD----------------------------- 193
+ WN ++S + ++ + +F + +
Sbjct: 247 DSVSWNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLI 306
Query: 194 ----TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF--VSNALIAMYGK 247
T + D + AC I + G +HG A + DVF V NALI MY +
Sbjct: 307 SQMRTSIHLDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTCF--DVFDNVKNALITMYSR 364
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
C + LF E+ L++WN+++ G++ E L +M+ +EG P+ +T+
Sbjct: 365 CRDLGHAFILFHRTEEKGLITWNAMLSGYAHMDRYEEVTFLFREML--QEGMEPNYVTIA 422
Query: 308 TVLP 311
+VLP
Sbjct: 423 SVLP 426
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 86 LLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSL 145
+LQE + + A+ +L C +++ GK H + QF ++ L+ MYS
Sbjct: 409 MLQEGMEPNYVTIAS--VLPLCARIANLQHGKEFHCYIMKHKQFEEYLLLWNALVDMYSR 466
Query: 146 CGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPC 205
G L++R+VFDSL R+ + +++ G+ L +F E+ E+KPD+ T
Sbjct: 467 SGRVLEARKVFDSLTKRDEVTYTSMILGYGMKGEGETTLKLFEEMCK-LEIKPDHVTMVA 525
Query: 206 VIKACGGIADVGFGS-------GVHGMAAKM---GLIGDVFVSNALI 242
V+ AC V G VHG+ ++ + D+F L+
Sbjct: 526 VLTACSHSGLVAQGQVLFKRMIDVHGIVPRLEHYACMADLFGRAGLL 572
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 107/198 (54%), Gaps = 4/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+ +GK+ H L+ F + + L+ MY+ CG D++ FD L ++ W A+VS
Sbjct: 337 LAVGKQAHGLM-VKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVS 395
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G +N + + L+++ + + + P T ++AC GIA + G +H K GL
Sbjct: 396 GHVQNGEHEEALTLYARMDKEG-IIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLG 454
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
V +AL MY KC +E+ + +F +P+R++++WNSII GFS+NG + DL +M
Sbjct: 455 LGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEM 514
Query: 293 MGCEEGFIPDVITVVTVL 310
EG IPD IT + +L
Sbjct: 515 K--MEGTIPDNITFINIL 530
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 103/197 (52%), Gaps = 6/197 (3%)
Query: 115 IGKRVHELVSASTQFSNDFI-INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
+G+++H L+ DF+ + L+TMY+ G + VF+S + RN W+A+++G
Sbjct: 238 MGEQMHGLIVKDGLL--DFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITG 295
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
+ +N +S+F ++ + P FTF V+ A + + G HG+ K+G
Sbjct: 296 YAQNGEADSAVSMFSQMHA-AGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEV 354
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
++V +AL+ MY KC + + + F+ + E ++V W +++ G +NG E+ L +M
Sbjct: 355 QIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMD 414
Query: 294 GCEEGFIPDVITVVTVL 310
+EG IP T+ + L
Sbjct: 415 --KEGIIPSKSTIASGL 429
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 2/191 (1%)
Query: 120 HELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNEL 179
H L ++ + T L+ MY G D+RR+FD + RN F W+ +V+G+ +
Sbjct: 140 HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKC 199
Query: 180 YTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSN 239
+ +F + + + F V+ A + G +HG+ K GL+ V V N
Sbjct: 200 SEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVEN 259
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
+L+ MY K + +FE ERN ++W+++I G+++NG + + + +M GF
Sbjct: 260 SLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAA--GF 317
Query: 300 IPDVITVVTVL 310
P T V VL
Sbjct: 318 TPTEFTFVGVL 328
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 109/198 (55%), Gaps = 4/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E G++VH VS F D + + LI MYS CG ++R+FD + ++ WN++++
Sbjct: 435 LEGGRQVHA-VSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMA 493
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G + N L + + F ++ + + P F++ V+ C ++ + G VH A+ G +
Sbjct: 494 GLSLNSLDKEAFTFFKKMR-EKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYM 552
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
D FV +ALI MY KC V+ +F++M +N V+WN +I G+++NG E+ L M
Sbjct: 553 NDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDM 612
Query: 293 MGCEEGFIPDVITVVTVL 310
+G E PD IT V VL
Sbjct: 613 IGSGEK--PDGITFVAVL 628
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 33/222 (14%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ C +K GK +H + S + S+D ++ RLI Y+ C SRR+FD + R
Sbjct: 11 LLQTCIDKKAHLAGKLIHAHMLRS-RLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKR 69
Query: 163 NLFQWNA-------------------------------LVSGFTKNELYTDVLSIFVELS 191
+++ WNA L+S T+N L ++ +S
Sbjct: 70 DIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMS 129
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ P +FT V+ ACG + DV G HG++ K+GL +++V NAL+ MY KC +
Sbjct: 130 REG-FVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCI 188
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
+ ++ F +PE N VS+ +++ G +++ E+F L M+
Sbjct: 189 GDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLML 230
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 88/158 (55%), Gaps = 3/158 (1%)
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
R++FD + + +L WN ++SG+++NE + + + +F E+ + + PD T ++ + G
Sbjct: 373 RQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRS-VHPDRTTLAIILSSLAG 431
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
+ + G VH ++ K D+++++ LI MY KC VE ++F+ + E ++V WNS+
Sbjct: 432 MMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSM 491
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ G S N E+F KM E+G P + TVL
Sbjct: 492 MAGLSLNSLDKEAFTFFKKMR--EKGMFPSQFSYATVL 527
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG D+E G+R H +S N+ + L+ MY+ C D+ + F +
Sbjct: 143 VLSACGALVDVECGRRCHG-ISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEP 201
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGF-- 218
N + A++ G ++ + +F L + D+ + V+ C GG + G
Sbjct: 202 NEVSFTAMMGGLADSDQVNEAFRLF-RLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHD 260
Query: 219 ----------GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS 268
G VH + K G D+ ++N+L+ MY K ++ +F MPE ++VS
Sbjct: 261 SNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVS 320
Query: 269 WNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
WN +I G+ + S ++ + L +M GF PD IT V +L
Sbjct: 321 WNVMIAGYGQKSQSSKAIEYLQRMQ--YHGFEPDEITYVNML 360
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C + G++VH + A + ND + + LI MYS CG +R VFD + +
Sbjct: 526 VLSCCAKLSSLSQGRQVHSQI-AREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGK 584
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
N WN ++ G+ +N + + ++ ++ E KPD TF V+ AC G+ D G
Sbjct: 585 NTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGE-KPDGITFVAVLTACSHSGLVDTGIKI 643
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ M + G+ V +I G+ + E L + MP
Sbjct: 644 -FNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMP 684
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
D++ NA++ Y K + +E+ LF MPERN+VSWN++I + NGF ++ + +M
Sbjct: 70 DIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRM- 128
Query: 294 GCEEGFIPDVITVVTVL 310
EGF+P T+ +VL
Sbjct: 129 -SREGFVPTHFTLASVL 144
>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Brachypodium distachyon]
Length = 682
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 114/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C K++ +G +VH + + + + + L+ MY C D+ F+ L +
Sbjct: 215 VLGHCASTKELLLGCQVHAQ-ALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEK 273
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A+++ +T+NE + D L +F++L + ++P+ FT+ + +C G+A + G+ +
Sbjct: 274 NVVSWTAVMTAYTQNERFEDALQLFLDLEIEG-VRPNEFTYAVALNSCAGLAALKNGNAL 332
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
A K G G + V NAL+ MY K + + ++F MP R++VSWNS+I G++ +G +
Sbjct: 333 SASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLA 392
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + M+ E +P +T V VL
Sbjct: 393 REAMCVFHDMLLAE--IVPSYVTFVGVL 418
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 104/207 (50%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L A H + +G++ H S + ++ N ++ MY C D+ +VF+++ +
Sbjct: 115 LSAAAHVRSYGMGRQCHGYAVKSGLQEHPYVCNA-VLHMYCQCAHVEDAVKVFENVSGFD 173
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+F +N++++GF + + I + + E + D+ ++ V+ C ++ G VH
Sbjct: 174 IFAFNSMINGFLDLGEFDGSIRIVRSMVGEVE-QWDHVSYVAVLGHCASTKELLLGCQVH 232
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
A K L +V+V +AL+ MYGKC + FEV+PE+N+VSW +++ +++N
Sbjct: 233 AQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSWTAVMTAYTQNERFE 292
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L + + EG P+ T L
Sbjct: 293 DALQLFLDLE--IEGVRPNEFTYAVAL 317
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 8/195 (4%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK +H + + F D I + LI Y CG +R++FD++ +RN N L+SG+
Sbjct: 30 GKAIHAQMIRAAHF--DVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYA 87
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
++D L++ + + + + A + G G HG A K GL
Sbjct: 88 SAGRHSDALALL----KAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHP 143
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+V NA++ MY +CA VE+ VK+FE + ++ ++NS+I GF + G S ++ M+G
Sbjct: 144 YVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGE 203
Query: 296 EEGFIPDVITVVTVL 310
E + D ++ V VL
Sbjct: 204 VEQW--DHVSYVAVL 216
>gi|356534169|ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Glycine max]
Length = 595
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 115/208 (55%), Gaps = 7/208 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L++C I ++ H VS T D + L+ +YS+CG + + +VF+ + R
Sbjct: 115 VLKSCAKFSGIGEVRQFHS-VSVKTGLWCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVR 173
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W L+SG+ K L+ + +S+F+ ++ ++P+ TF ++ ACG + + G G+
Sbjct: 174 DVVSWTGLISGYVKTGLFNEAISLFLRMN----VEPNVGTFVSILGACGKLGRLNLGKGI 229
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ K ++ V NA++ MY KC V + K+F+ MPE++++SW S+I G +
Sbjct: 230 HGLVFKCLYGEELVVCNAVLDMYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSP 289
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
ES DL +M GF PD + + +VL
Sbjct: 290 RESLDLFSQMQA--SGFEPDGVILTSVL 315
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG + +GK +H LV + + ++ ++ MY C D+R++FD + +
Sbjct: 213 ILGACGKLGRLNLGKGIHGLVFKCL-YGEELVVCNAVLDMYMKCDSVTDARKMFDEMPEK 271
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +++ G + + + L +F ++ + + +PD V+ AC + + G V
Sbjct: 272 DIISWTSMIGGLVQCQSPRESLDLFSQMQA-SGFEPDGVILTSVLSACASLGLLDCGRWV 330
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + DV + L+ MY KC ++ ++F MP +N+ +WN+ I G + NG+
Sbjct: 331 HEYIDCHRIKWDVHIGTTLVDMYAKCGCIDMAQRIFNGMPSKNIRTWNAYIGGLAINGYG 390
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ ++ E G P+ +T + V
Sbjct: 391 KEALKQFEDLV--ESGTRPNEVTFLAVF 416
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 13/213 (6%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR---LITMYSLCGFPLDSRRVFD- 157
VLL D+ K++H + S +ND ++ L + +P + + FD
Sbjct: 11 VLLDLIHKCNDLRSFKQIHAHLLTSALVTNDLVVTKAANFLGKHITDVHYPCNFLKQFDW 70
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
SL + F N L+SG+ +L + I+ + PD +TFP V+K+C + +G
Sbjct: 71 SLSS---FPCNLLISGYASGQLPWLAILIY-RWTVRNGFVPDVYTFPAVLKSCAKFSGIG 126
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
H ++ K GL D++V N L+ +Y C K+FE M R++VSW +I G+
Sbjct: 127 EVRQFHSVSVKTGLWCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGYV 186
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ G E+ L ++M P+V T V++L
Sbjct: 187 KTGLFNEAISLFLRM-----NVEPNVGTFVSIL 214
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 100/176 (56%), Gaps = 3/176 (1%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ LI+MY+ G D+R+ FD L +NL +NA+V G+ KN + +F E++ DT
Sbjct: 61 VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIA-DT 119
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+ FTF ++ I +G G +HG K G + + NALI+MY +C +E
Sbjct: 120 GIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAA 179
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F M +RN++SW S+I GF+++GF+ + ++ KM+ E G P+ IT V VL
Sbjct: 180 FQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKML--ETGTKPNEITYVAVL 233
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 75/148 (50%), Gaps = 3/148 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+++H + SN I N LI+MYS CG + +VF+ ++ RN+ W ++++GF
Sbjct: 144 GEQIHGRLLKGGYKSNQCICNA-LISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 202
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG-VHGMAAKMGLIGD 234
K+ T L +F ++ +T KP+ T+ V+ AC + + G + M + G++
Sbjct: 203 KHGFATRALEMFHKML-ETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR 261
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ ++ + G+ + E ++ MP
Sbjct: 262 MEHYACMVDLLGRSGLLVEAMEFINSMP 289
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 6/55 (10%)
Query: 244 MYGKCAF---VEEMVKLFEVMPERNLVSWNSIICGFSENGFSC--ESFDLLIKMM 293
MY KCA V++ K+FE MPE N++SW +II + ++G C E+ +L KM+
Sbjct: 1 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSG-ECDKEAIELFCKMI 54
>gi|255539985|ref|XP_002511057.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550172|gb|EEF51659.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 543
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 109/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ +AC + GK H + F +D + L+ MY+ CG D R++FD + +
Sbjct: 146 IFKACASNSLLLQGKVAHG-DAVKADFDSDVYVKAALVDMYAKCGQFCDGRKIFDEMPVK 204
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L W A+++ + + E + L I + L PD T V A G + D + V
Sbjct: 205 DLVCWTAMITAYEQGEKPDEAL-ILLRKMQQHGLFPDEVTMVSVASAIGQLWDAKWAQSV 263
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A + + ++FV+N+++AM+ KC +E+ +F++M ERN++SWNS++ G+++NG +
Sbjct: 264 HAYAIRRSFLKEIFVANSILAMHTKCGNMEKSCLIFDMMDERNVISWNSMLSGYTQNGQA 323
Query: 283 CESFDLLIKMM--GCEEGFIPDVITVVT 308
E+ L KM GCE + +I V
Sbjct: 324 SEALFLFDKMRDSGCEPNSVTALIMVAA 351
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 125/245 (51%), Gaps = 8/245 (3%)
Query: 70 ITTLCEESKSLNKALSLLQE-NLHNADLKEATGV-LLQACGHEKDIEIGKRVHELVSAST 127
+ T E+ + ++AL LL++ H E T V + A G D + + VH +
Sbjct: 212 MITAYEQGEKPDEALILLRKMQQHGLFPDEVTMVSVASAIGQLWDAKWAQSVHAYAIRRS 271
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
F+ N+ ++ M++ CG S +FD + RN+ WN+++SG+T+N ++ L +F
Sbjct: 272 FLKEIFVANS-ILAMHTKCGNMEKSCLIFDMMDERNVISWNSMLSGYTQNGQASEALFLF 330
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
++ D+ +P++ T ++ AC + G H + D+ + NAL+ MY K
Sbjct: 331 DKMR-DSGCEPNSVTALIMVAACAYLGSRHLGGKFHDFILDSKMKIDMNLRNALMDMYAK 389
Query: 248 CAFVEEMVKLF-EVMP-ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
C ++ V++F +V P ERN+ SWN +I G+ +G E+ L +M EE P+ IT
Sbjct: 390 CGDLKTAVEMFNDVHPSERNVSSWNVLISGYGMHGHGKEALRLYSRMQ--EESVEPNHIT 447
Query: 306 VVTVL 310
++L
Sbjct: 448 FTSIL 452
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 100/197 (50%), Gaps = 7/197 (3%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK----TRNLFQWNALVS 172
K++H ++ ++ + + ++I Y+ G+ +R +FD + R+ F WN ++
Sbjct: 54 KQIHSALTTNSLITKSPHLAAQIIIKYAKFGYLNCARSLFDGINIRGDNRSSFLWNTMIR 113
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
+ L + L +++ L + +N+TFP + KAC + + G HG A K
Sbjct: 114 AYANAGLCFETLELYM-LMRRAGVSSNNYTFPFIFKACASNSLLLQGKVAHGDAVKADFD 172
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
DV+V AL+ MY KC + K+F+ MP ++LV W ++I + + E+ LL KM
Sbjct: 173 SDVYVKAALVDMYAKCGQFCDGRKIFDEMPVKDLVCWTAMITAYEQGEKPDEALILLRKM 232
Query: 293 MGCEEGFIPDVITVVTV 309
+ G PD +T+V+V
Sbjct: 233 Q--QHGLFPDEVTMVSV 247
>gi|125545042|gb|EAY91181.1| hypothetical protein OsI_12790 [Oryza sativa Indica Group]
Length = 885
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 110/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL ACG + + +GK +H + ++ ++ I + L+ Y CG + R+ +++ R
Sbjct: 657 LLSACGSLQSLYLGKELHAQIIKNS-MEDNLQIGSTLVWFYCKCGEYTYAARILEAMPDR 715
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W AL+SG+ + L ++ D +KP+ +T+ +KAC + + +G +
Sbjct: 716 DAISWTALISGYNNLGHNVEALKSLDDMLWDG-VKPNTYTYSSALKACAKLEALQYGRKI 774
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K +VFV ++LI MY +C V+E ++F+ MPE NLV+W II GF++NG
Sbjct: 775 HGFVNKTQDFSNVFVGSSLIDMYMRCGKVDEARRVFDAMPEHNLVTWKVIITGFAQNGLC 834
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + M +EG D + TVL
Sbjct: 835 EEALKYMYLMQ--QEGHEVDDFVLSTVL 860
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 104/190 (54%), Gaps = 3/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL++CG D ++G++VH + +SN I+++ + Y+ CG + +FD + +R
Sbjct: 456 LLKSCGERCDAKLGQQVHCCI-VKGGWSN-VIVDSAIAHFYAQCGDVASASAIFDKMASR 513
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +++ + ++ L +F E+ S+ +P+ FT V+KAC V FG +
Sbjct: 514 DVISWTTMITAYVQHGHGGQALRMFSEMVSEG-FRPNEFTVCSVLKACAEEKAVRFGKQL 572
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K D+ + +AL+ MY +C V + +F++MP RN ++W S+I G++++G
Sbjct: 573 HCAVLKKMYKNDIHIGSALVTMYARCGEVFDAQAVFDMMPRRNTITWTSMISGYAQSGHG 632
Query: 283 CESFDLLIKM 292
++ L KM
Sbjct: 633 EKAIFLFRKM 642
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 106/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC EK + GK++H V + ND I + L+TMY+ CG D++ VFD + R
Sbjct: 556 VLKACAEEKAVRFGKQLHCAV-LKKMYKNDIHIGSALVTMYARCGEVFDAQAVFDMMPRR 614
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N W +++SG+ ++ + +F ++ + +N T ++ ACG + + G +
Sbjct: 615 NTITWTSMISGYAQSGHGEKAIFLFRKMKM-RRVFVNNLTIVGLLSACGSLQSLYLGKEL 673
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K + ++ + + L+ Y KC ++ E MP+R+ +SW ++I G++ G +
Sbjct: 674 HAQIIKNSMEDNLQIGSTLVWFYCKCGEYTYAARILEAMPDRDAISWTALISGYNNLGHN 733
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M+ +G P+ T + L
Sbjct: 734 VEALKSLDDMLW--DGVKPNTYTYSSAL 759
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 8/213 (3%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
EA L+ CG + +RVH + S F+ N LI+ Y+ D+R+VFD
Sbjct: 353 EALASSLRDCGGADGV---RRVHAVAVRSLDSLGTFVANN-LISAYARFDEVSDARKVFD 408
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
+ R++ W A+++ + K Y +V+ +F ++ + ++ ++ TF C++K+CG D
Sbjct: 409 EMPERSVVSWTAMMNAYLKLGHYGEVVRLFFDMVG-SGVQGNSLTFVCLLKSCGERCDAK 467
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G VH K G +V V +A+ Y +C V +F+ M R+++SW ++I +
Sbjct: 468 LGQQVHCCIVKGGW-SNVIVDSAIAHFYAQCGDVASASAIFDKMASRDVISWTTMITAYV 526
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++G ++ + +M+ EGF P+ TV +VL
Sbjct: 527 QHGHGGQALRMFSEMV--SEGFRPNEFTVCSVL 557
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
PD ++ CGG V VH +A + FV+N LI+ Y + V + K+
Sbjct: 350 PDAEALASSLRDCGGADGV---RRVHAVAVRSLDSLGTFVANNLISAYARFDEVSDARKV 406
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
F+ MPER++VSW +++ + + G E L M+G
Sbjct: 407 FDEMPERSVVSWTAMMNAYLKLGHYGEVVRLFFDMVG 443
>gi|357127969|ref|XP_003565649.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37320-like [Brachypodium distachyon]
Length = 567
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 113/204 (55%), Gaps = 4/204 (1%)
Query: 107 CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQ 166
C ++ I G ++H L+ + + T LI++Y+ C ++ +VF ++ RN+
Sbjct: 190 CAVKQSIRGGGQLHALL-VKVGYDLAVLSGTSLISLYARCYQLENAYQVFQNMPVRNVVS 248
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
W AL+SG+ ++ L +F +L + +P++ TF + C A +G G VHG+
Sbjct: 249 WTALISGYAQDNQVEPCLQVF-QLMRQSACRPNDITFATIFSVCTNHALLGLGRSVHGLE 307
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
+MG V + NALI+MY KC ++E +F+ + ++LVSWNS+I G+S+ G +
Sbjct: 308 LRMGFDLCVHILNALISMYAKCGSIDEAQFIFQSIACKDLVSWNSMIFGYSQYGLAEHCL 367
Query: 287 DLLIKMMGCEEGFIPDVITVVTVL 310
LL +M +E +PDVI+ + +L
Sbjct: 368 KLLKEME--KEHIVPDVISFLGIL 389
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 81/176 (46%), Gaps = 7/176 (3%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN--TRLITMYSLCGFPLDSRRVFDS 158
+ C + + +G+ VH L + D ++ LI+MY+ CG +++ +F S
Sbjct: 285 ATIFSVCTNHALLGLGRSVHGL---ELRMGFDLCVHILNALISMYAKCGSIDEAQFIFQS 341
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ ++L WN+++ G+++ L L + E+ + + PD +F ++ +C V
Sbjct: 342 IACKDLVSWNSMIFGYSQYGLAEHCLKLLKEMEKE-HIVPDVISFLGILSSCRHACLVEE 400
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
G K+G+ ++ + ++ + G+ ++E L M N V W S++
Sbjct: 401 GRRCFKAMLKLGIEPELDHYSCMVDLLGRAGLLDEACDLIHTMSMTPNAVIWGSLL 456
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
+ D F I C + G +H + K+G V +LI++Y +C +E
Sbjct: 176 ISADVSIFASAISFCAVKQSIRGGGQLHALLVKVGYDLAVLSGTSLISLYARCYQLENAY 235
Query: 256 KLFEVMPERNLVSWNSIICGFSENGF--SCESFDLLIKMMGCEEGFIPDVITVVTV 309
++F+ MP RN+VSW ++I G++++ C L++ C P+ IT T+
Sbjct: 236 QVFQNMPVRNVVSWTALISGYAQDNQVEPCLQVFQLMRQSACR----PNDITFATI 287
>gi|356531824|ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Glycine max]
Length = 682
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 144/291 (49%), Gaps = 15/291 (5%)
Query: 26 PQFPATVIQRNKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALS 85
P+F R K F EK + S +N + + ++I ++K L +AL+
Sbjct: 45 PRFTTPRKHRTKKP--KPFTEKDAFPSSLPLHNKNP--IFIFKDIKRFARQNK-LKEALT 99
Query: 86 LLQENLHNADLKEAT--GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMY 143
+L +AT ++ AC K + G+ VH + + +N F+ T+L+ MY
Sbjct: 100 ILDYVDQRGIPVDATTFSSVVAACIRAKSLPQGREVHTHIRINGLENNSFL-RTKLVHMY 158
Query: 144 SLCGFPLDSRRVFDSLKTRNLFQWNALVSG--FTKNELYTDVLSIFVELSS-DTELKPDN 200
+ CG D++++FD L +++ WNAL+ G + Y DVL + E+ + EL +
Sbjct: 159 TACGSLEDAQKLFDGLPCESVYPWNALLRGTVVSGKRQYIDVLKTYTEMRALGVEL--NV 216
Query: 201 FTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV 260
++F VIK+ G G HG+ K GL+ + + +LI MY KC V ++FE
Sbjct: 217 YSFSNVIKSFAGARAFSQGLKTHGLLIKNGLVDNYILRTSLIDMYFKCGKVRLACRVFEE 276
Query: 261 MPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+PER++V W +++ GF+ N E + + M+ EEG P+ + + V+P
Sbjct: 277 IPERDVVVWGAMLAGFAHNRLQREVLEYVRWMV--EEGVKPNSVVMTIVIP 325
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 3/197 (1%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
+G+ H V + +S + + LI MY CG + +RRVF K RN+ W AL+SG
Sbjct: 334 RLGQEFHAYVVKTKSYSKLVPVQSSLIDMYCKCGDMISARRVFYGSKERNVVCWTALMSG 393
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
+ N L + + + +PD T V+ C + + G +H A K +
Sbjct: 394 YAANGKLEQALRSTIWMQQEG-FRPDVVTLATVLPVCAQLRALEQGKQIHAYALKHWFLP 452
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
+V V+++L+ MY KC VE +LF+ M +RN++SW ++I + ENG+ CE+ ++ M
Sbjct: 453 NVSVASSLMTMYSKCGVVEYSRRLFDNMEQRNVISWTAMIDSYIENGYLCEALGVIRSMQ 512
Query: 294 GCEEGFIPDVITVVTVL 310
+ PD + + +L
Sbjct: 513 LSKHR--PDSVAIGRML 527
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 94/182 (51%), Gaps = 4/182 (2%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
+++I+ T LI MY CG + RVF+ + R++ W A+++GF N L +VL +V
Sbjct: 249 DNYILRTSLIDMYFKCGKVRLACRVFEEIPERDVVVWGAMLAGFAHNRLQREVLE-YVRW 307
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD-VFVSNALIAMYGKCA 249
+ +KP++ VI G + G H K V V ++LI MY KC
Sbjct: 308 MVEEGVKPNSVVMTIVIPVIGEVCARRLGQEFHAYVVKTKSYSKLVPVQSSLIDMYCKCG 367
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
+ ++F ERN+V W +++ G++ NG ++ I M +EGF PDV+T+ TV
Sbjct: 368 DMISARRVFYGSKERNVVCWTALMSGYAANGKLEQALRSTIWMQ--QEGFRPDVVTLATV 425
Query: 310 LP 311
LP
Sbjct: 426 LP 427
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 4/227 (1%)
Query: 78 KSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
++L + + QE + AT +L C + +E GK++H + F + + +
Sbjct: 402 QALRSTIWMQQEGFRPDVVTLAT--VLPVCAQLRALEQGKQIHAY-ALKHWFLPNVSVAS 458
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L+TMYS CG SRR+FD+++ RN+ W A++ + +N + L + + ++ +
Sbjct: 459 SLMTMYSKCGVVEYSRRLFDNMEQRNVISWTAMIDSYIENGYLCEALGVIRSMQL-SKHR 517
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
PD+ ++ CG V G +HG K FVS LI MYG + + +
Sbjct: 518 PDSVAIGRMLSVCGERKLVKLGKEIHGQILKRDFTSVHFVSAELINMYGFFGDINKANLV 577
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVI 304
F +P + ++W ++I + N ++ +L +M F + I
Sbjct: 578 FNAVPVKGSMTWTALIRAYGYNELYQDAVNLFDQMRYSPNHFTFEAI 624
>gi|297824663|ref|XP_002880214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326053|gb|EFH56473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 585
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 113/209 (54%), Gaps = 8/209 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L++ C ++E G ++H L+ SN F+ +T L+ Y CG ++R+VF+++ R
Sbjct: 148 LIRLCTDSTNVEAGNQLHSLIVKQGLESNCFL-STSLVDFYGKCGLIGEARQVFEAVLVR 206
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTE-LKPDNFTFPCVIKACGGIADVGFGSG 221
+L WNALVS + N + + + +SS+ D+FT ++ ACG + G
Sbjct: 207 DLVLWNALVSSYVLNGMIDEAFGLLKLMSSEKNGFTGDDFTLSSLLSACG----IKQGKQ 262
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H + K+ + D+ V+ AL+ MY K + + K FE M RN+VSWN++I GF +NG
Sbjct: 263 IHAIVFKLSYLFDIPVATALVNMYAKSNHMSDAHKCFESMVVRNIVSWNAMIVGFGQNGE 322
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M+ E PD +T +VL
Sbjct: 323 GREAMRLFGQML--RENLQPDELTFASVL 349
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 107/208 (51%), Gaps = 9/208 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL ACG I+ GK++H +V + D + T L+ MY+ D+ + F+S+ R
Sbjct: 251 LLSACG----IKQGKQIHAIV-FKLSYLFDIPVATALVNMYAKSNHMSDAHKCFESMVVR 305
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WNA++ GF +N + + +F ++ + L+PD TF V+ +C + + V
Sbjct: 306 NIVSWNAMIVGFGQNGEGREAMRLFGQMLREN-LQPDELTFASVLCSCTKFSAIWEIKQV 364
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
M K G + V+N+LI+ Y + + E + F + E +LVSW S+I + +GF+
Sbjct: 365 QAMVTKKGSAEFLSVANSLISSYSRTGNLSEALLCFHSIREPDLVSWTSVIGALASHGFA 424
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
ES + M+ + PD IT + VL
Sbjct: 425 EESLRIFESML---QKLQPDKITFLEVL 449
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 94/184 (51%), Gaps = 4/184 (2%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS----I 186
N +L+ Y+ D+ ++FD + RN+ WN L+ G + T+ +
Sbjct: 69 NSLFFQNKLLQAYTKIREFDDADKLFDEMLVRNIVTWNILIHGVIHRDGDTNHRAHLGFC 128
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
++ S +E+ D+ +F +I+ C +V G+ +H + K GL + F+S +L+ YG
Sbjct: 129 YLSRSLLSEVILDHVSFIGLIRLCTDSTNVEAGNQLHSLIVKQGLESNCFLSTSLVDFYG 188
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
KC + E ++FE + R+LV WN+++ + NG E+F LL M + GF D T+
Sbjct: 189 KCGLIGEARQVFEAVLVRDLVLWNALVSSYVLNGMIDEAFGLLKLMSSEKNGFTGDDFTL 248
Query: 307 VTVL 310
++L
Sbjct: 249 SSLL 252
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 10/180 (5%)
Query: 86 LLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFI-INTRLITMYS 144
+L+ENL +L A+ +L +C I K+V +V+ S +F+ + LI+ YS
Sbjct: 333 MLRENLQPDELTFAS--VLCSCTKFSAIWEIKQVQAMVTKKG--SAEFLSVANSLISSYS 388
Query: 145 LCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFP 204
G ++ F S++ +L W +++ + + L IF + +L+PD TF
Sbjct: 389 RTGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLRIFESMLQ--KLQPDKITFL 446
Query: 205 CVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
V+ AC GG+ G M + + LI + G+ F++E + + MP
Sbjct: 447 EVLSACSHGGLVQEGLRC-FKRMTEVYKIEPEEEHYTCLIDLLGRAGFIDEAFDVLKSMP 505
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
HG K G +F N L+ Y K ++ KLF+ M RN+V+WN +I G
Sbjct: 59 HGFMVKQGTYNSLFFQNKLLQAYTKIREFDDADKLFDEMLVRNIVTWNILIHG 111
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 135/268 (50%), Gaps = 8/268 (2%)
Query: 48 SSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQ--ENLHNADLKEATGVLLQ 105
+++ L K S +++ ++ S N AL L + + LH + +
Sbjct: 75 NAILLLEKNVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFK 134
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNL- 164
ACG + E+G +H V SN F+ N +I+MY C + +R+VFD L R +
Sbjct: 135 ACGEISNFELGASIHGCVIRLGFESNVFVCNA-VISMYGKCKAVVHARKVFDELCYRGIC 193
Query: 165 --FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
WN++VS ++ + +S+F E++ + PD ++ CG + G V
Sbjct: 194 DSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQV 253
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + GL+ DVFV NAL+ MY KC +E+ K+FE M +++V+WN+++ G+S+NG
Sbjct: 254 HGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRF 313
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L KM EE DV+T +V+
Sbjct: 314 EDALSLFGKMR--EEKIESDVVTWSSVI 339
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 13/219 (5%)
Query: 103 LLQACGHEKDIEIGKRVH------ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
LL AC + GK H L ++D + LI MY+ C +R +F
Sbjct: 373 LLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMF 432
Query: 157 DSL--KTRNLFQWNALVSGFTKNELYTDVLSIFVEL-SSDTELKPDNFTFPCVIKACGGI 213
D + K R++ W ++ G+ ++ L +F E+ D + P++FT CV+ AC +
Sbjct: 433 DEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARL 492
Query: 214 ADVGFGSGVHGMAAKMGLIGD--VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
A + FG +H + I +FV+N LI MY K V+ +F+ M +RN VSW S
Sbjct: 493 AALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTS 552
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ G+ +G S ++F + +M +E + D IT + VL
Sbjct: 553 LLTGYGMHGRSEDAFRVFDEMR--KEALVLDGITFLVVL 589
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 108/228 (47%), Gaps = 11/228 (4%)
Query: 90 NLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFP 149
N HN L ++ + Q C K + K +H+ + N + T LI Y
Sbjct: 17 NTHNLLLYHSSTISKQQC---KTLTQAKLLHQQYIINGHLLNSYTNVTNLIYTYISSNSI 73
Query: 150 LDSRRVFDSLKT---RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCV 206
++ + + T +++ WN L+ L +F + + PD++TFP V
Sbjct: 74 TNAILLLEKNVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKT-LHWTPDHYTFPFV 132
Query: 207 IKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNL 266
KACG I++ G+ +HG ++G +VFV NA+I+MYGKC V K+F+ + R +
Sbjct: 133 FKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGI 192
Query: 267 ---VSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
V+WNSI+ +S + F L + M G +PD + VV +LP
Sbjct: 193 CDSVTWNSIVSVYS-HCFVPNVAVSLFREMTVGYGILPDTVGVVNILP 239
>gi|218188763|gb|EEC71190.1| hypothetical protein OsI_03082 [Oryza sativa Indica Group]
Length = 486
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 104/188 (55%), Gaps = 3/188 (1%)
Query: 123 VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTD 182
+SA T F+ D + + ++ MY+ CG D+RR+FD + RN+ W+AL+ G+ +++
Sbjct: 39 LSAKTPFAGDVFVGSSVLDMYAKCGHLADARRLFDEMPERNVVSWSALICGYADAGMHSA 98
Query: 183 VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALI 242
+ IF L+ + + ++FT C+++ C G+ VH + K L FV ++L+
Sbjct: 99 AMEIF-RLALEEAVPVNDFTVSCILRVCAAATLFELGAQVHARSIKTALNASPFVGSSLV 157
Query: 243 AMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
++Y KC VE ++F PERNL WN+ + +++G + +F + M GF P+
Sbjct: 158 SLYSKCGLVECAYQVFGEAPERNLGIWNAGLNASAQHGHTTAAFQRFMDMQNA--GFRPN 215
Query: 303 VITVVTVL 310
IT ++++
Sbjct: 216 SITFLSLI 223
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG++AK GDVFV ++++ MY KC + + +LF+ MPERN+VSW+++ICG+++ G
Sbjct: 35 ALHGLSAKTPFAGDVFVGSSVLDMYAKCGHLADARRLFDEMPERNVVSWSALICGYADAG 94
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ + EE + TV +L
Sbjct: 95 MHSAAMEIF--RLALEEAVPVNDFTVSCIL 122
>gi|449447755|ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Cucumis sativus]
Length = 696
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 147/295 (49%), Gaps = 21/295 (7%)
Query: 26 PQFPATVIQRNKHSLRSIFKEK----SSLSLSAKTNNASTQGLHFLQEITTLCEESKSLN 81
P ++ + ++ R F EK SSL L K +A +++ ++K L
Sbjct: 44 PPSKIKIVSKFRNRKRPTFAEKDAFPSSLPLHTKNPHA------IYEDVQRFARQNK-LK 96
Query: 82 KALSLLQENLHNADLKEAT--GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
+AL+++ AT L+ AC K + K++H + + +N+FI TRL
Sbjct: 97 EALTIMDYVDQQGIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGLENNEFI-RTRL 155
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG--FTKNELYTDVLSIFVELSS-DTEL 196
+ MY+ CG +++++FD +++++ WNAL+ G Y +LS + E+ EL
Sbjct: 156 VHMYTACGSLEEAQKLFDESSSKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVEL 215
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
+ ++F +IK+ G + G HG+ K GLIG + L+ MY KC ++ +
Sbjct: 216 --NVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQ 273
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+F + ER++V W SII GF+ N E+ + +M+ ++G P+ + + T+LP
Sbjct: 274 MFGEITERDVVVWGSIIAGFAHNRLQREALEYTRRMI--DDGIRPNSVILTTILP 326
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
+G+ VH V + +S I + LI MY CG R VF + RN W AL+SG
Sbjct: 335 RLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSG 394
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
+ N + + + + +PD T ++ C + + G +H A K +
Sbjct: 395 YALNGRLEQAVRSVIWMQQEG-FRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLP 453
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
+V + ++L+ MY KC ++ +KLF M +RN++ W ++I + EN E+ D+ M
Sbjct: 454 NVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQ 513
Query: 294 GCEEGFIPDVITVVTVL 310
+ PD +T+ +L
Sbjct: 514 LSKHR--PDTVTMSRIL 528
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L C + + GK +H + N I+++ L+ MYS CG + ++F+ ++
Sbjct: 424 ATILPVCAQLRALRPGKEIHAYAMKNCFLPNVSIVSS-LMVMYSKCGVMDYTLKLFNGME 482
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN+ W A++ + +N+ + + IF + ++ +PD T ++ C + G
Sbjct: 483 QRNVILWTAMIDSYIENQCPHEAIDIFRAMQL-SKHRPDTVTMSRILYICSEQKMLKMGK 541
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG K FVS L+ +YGKC V+ +FE +P + ++W +II + E+G
Sbjct: 542 EIHGQVLKRKFEPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEAYGESG 601
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL +M G P+ T VL
Sbjct: 602 EFQEAIDLFDRMRS--RGISPNHFTFKVVL 629
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 4/179 (2%)
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
++ T L+ MY CG +R++F + R++ W ++++GF N L + L + D
Sbjct: 253 LLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFAHNRLQREALE-YTRRMID 311
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM-GLIGDVFVSNALIAMYGKCAFVE 252
++P++ ++ G I G VH K +F+ +ALI MY KC +
Sbjct: 312 DGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIG 371
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+F ERN + W +++ G++ NG ++ +I M +EGF PD++TV T+LP
Sbjct: 372 SGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQ--QEGFRPDIVTVATILP 428
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 113/221 (51%), Gaps = 12/221 (5%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
K A +L AC ++ G+ +H ++ S F ++ ++ ++TMY CG ++R+VF
Sbjct: 160 KSAMVTILSACSSPALVQDGRMIHSCIALSG-FESELLVANAVMTMYGRCGAVEEARKVF 218
Query: 157 DSLKT--RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
D++ R++ WN ++S + N+ D + ++ + +L+PD T+ ++ AC
Sbjct: 219 DAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRM----QLRPDKVTYVSLLSACSSAE 274
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
DVG G +H L +V V NAL++MY KC E +F+ M +R+++SW +II
Sbjct: 275 DVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIIS 334
Query: 275 GFSENGFSCESFDLLIKMM-----GCEEGFIPDVITVVTVL 310
+ E+ L +M+ G + PD + VT+L
Sbjct: 335 AYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTIL 375
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 113/215 (52%), Gaps = 10/215 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC +D+ +G+ +H+ + + + + I+ L++MY+ CG ++R VFD ++ R
Sbjct: 266 LLSACSSAEDVGLGRVLHKQI-VNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQR 324
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVEL------SSDTELKPDNFTFPCVIKACGGIADV 216
++ W ++S + + L + +F ++ S +KPD F ++ AC ++ +
Sbjct: 325 SIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSAL 384
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS-WNSIICG 275
G V AA GL D V A++ +YGKC +EE ++F+ + R V WN++I
Sbjct: 385 EQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAV 444
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+++ G S E+ L +M EG PD + V++L
Sbjct: 445 YAQFGQSHEALKLFWRME--MEGVRPDSFSFVSIL 477
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 10/210 (4%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL-KTR 162
L +CG + + G R+H++V ++ D ++ L+ MY CG ++RVF + +TR
Sbjct: 65 LGSCGDPESLRDGIRIHQMV-VDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTR 123
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W+ + + + L F +K ++ AC A V G +
Sbjct: 124 NVISWSIMAGAHALHGNVWEALRHF-RFMLLLGIKATKSAMVTILSACSSPALVQDGRMI 182
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE--RNLVSWNSIICGFSENG 280
H A G ++ V+NA++ MYG+C VEE K+F+ M E R++VSWN ++ + N
Sbjct: 183 HSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHND 242
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M PD +T V++L
Sbjct: 243 RGKDAIQLYQRMQ-----LRPDKVTYVSLL 267
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 3/135 (2%)
Query: 142 MYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF 201
MY+ C P D++ FD+L+ RNL+ W LV+ F + + L + D ++PD
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDG-VRPDAV 59
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
TF + +CG + G +H M L D VSNAL+ MY KC + ++F M
Sbjct: 60 TFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKM 119
Query: 262 PE-RNLVSWNSIICG 275
RN++SW SI+ G
Sbjct: 120 ERTRNVISW-SIMAG 133
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 22/185 (11%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E GK V E +AS S+D + T ++ +Y CG ++RR+FD++ +R
Sbjct: 374 ILNACADVSALEQGKMVSEQ-AASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSR 432
Query: 163 NLFQ-WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVG-- 217
Q WNA+++ + + + L +F + + ++PD+F+F ++ AC G+ D G
Sbjct: 433 PDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEG-VRPDSFSFVSILLACSHTGLEDQGKS 491
Query: 218 -FGS------GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
F S V G + D L+ G+ EE ++ V P + V+W
Sbjct: 492 YFTSMTTEYRNVTRTIQHFGCVAD------LLGRGGRLKEAEEFLEKLPVKP--DAVAWT 543
Query: 271 SIICG 275
S++
Sbjct: 544 SLLAA 548
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 244 MYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
MY C + F+ + +RNL SW ++ F+ +G S E+ L +M ++G PD
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMR--QDGVRPDA 58
Query: 304 ITVVTVL 310
+T +T L
Sbjct: 59 VTFITAL 65
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 109/211 (51%), Gaps = 6/211 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC + GK+VH + F D +N LI +Y CG +R+VFD + R
Sbjct: 157 VLKACAYIFGFSEGKQVHCQI-VKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPER 215
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN+++ + Y L +F E+ E PD +T V+ AC G+ + G+
Sbjct: 216 SLVSWNSMIDALVRFGEYDSALQLFREMQRSFE--PDGYTMQSVLSACAGLGSLSLGTWA 273
Query: 223 HGMAAK---MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
H + + + DV V N+LI MY KC + ++F+ M +R+L SWN++I GF+ +
Sbjct: 274 HAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATH 333
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + E+ + +M+ E P+ +T V +L
Sbjct: 334 GRAEEAMNFFDRMVDKRENVRPNSVTFVGLL 364
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 82/158 (51%), Gaps = 4/158 (2%)
Query: 154 RVFDSLKTRNLFQWNALVSGFTKN-ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
RVFDS++ + F WN L+ + + ++ ++ E PD TFP V+KAC
Sbjct: 104 RVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAY 163
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
I G VH K G GDV+V+N LI +YG C ++ K+F+ MPER+LVSWNS+
Sbjct: 164 IFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSM 223
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I G + L +M + F PD T+ +VL
Sbjct: 224 IDALVRFGEYDSALQLFREM---QRSFEPDGYTMQSVL 258
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 109/211 (51%), Gaps = 6/211 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC + GK+VH + F D +N LI +Y CG +R+VFD + R
Sbjct: 148 VLKACAYIFGFSEGKQVHCQI-VKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPER 206
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN+++ + Y L +F E+ E PD +T V+ AC G+ + G+
Sbjct: 207 SLVSWNSMIDALVRFGEYDSALQLFREMQRSFE--PDGYTMQSVLSACAGLGSLSLGTWA 264
Query: 223 HGMAAK---MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
H + + + DV V N+LI MY KC + ++F+ M +R+L SWN++I GF+ +
Sbjct: 265 HAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATH 324
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + E+ + +M+ E P+ +T V +L
Sbjct: 325 GRAEEAMNFFDRMVDKRENVRPNSVTFVGLL 355
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 82/158 (51%), Gaps = 4/158 (2%)
Query: 154 RVFDSLKTRNLFQWNALVSGFTKN-ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
RVFDS++ + F WN L+ + + ++ ++ E PD TFP V+KAC
Sbjct: 95 RVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAY 154
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
I G VH K G GDV+V+N LI +YG C ++ K+F+ MPER+LVSWNS+
Sbjct: 155 IFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSM 214
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I G + L +M + F PD T+ +VL
Sbjct: 215 IDALVRFGEYDSALQLFREM---QRSFEPDGYTMQSVL 249
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 111/212 (52%), Gaps = 8/212 (3%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+AC + GK+VH ++V F D +N LI +Y CG +R+VFD +
Sbjct: 134 VLKACAYIFGFSEGKQVHCQIVKHG--FGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPE 191
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R+L WN+++ + Y L +F E+ E PD +T V+ AC G+ + G+
Sbjct: 192 RSLVSWNSMIDALVRFGEYDSALQLFREMQRSFE--PDGYTMQSVLSACAGLGSLSLGTW 249
Query: 222 VHGMAAK---MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
H + + + DV V N+LI MY KC + ++F+ M +R+L SWN++I GF+
Sbjct: 250 AHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFAT 309
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+G + E+ + +M+ E P+ +T V +L
Sbjct: 310 HGRAEEAMNFFDRMVDKRENVRPNSVTFVGLL 341
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 82/158 (51%), Gaps = 4/158 (2%)
Query: 154 RVFDSLKTRNLFQWNALVSGFTKN-ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
RVFDS++ + F WN L+ + + ++ ++ E PD TFP V+KAC
Sbjct: 81 RVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAY 140
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
I G VH K G GDV+V+N LI +YG C ++ K+F+ MPER+LVSWNS+
Sbjct: 141 IFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSM 200
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I G + L +M + F PD T+ +VL
Sbjct: 201 IDALVRFGEYDSALQLFREM---QRSFEPDGYTMQSVL 235
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 113/199 (56%), Gaps = 4/199 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
+++IG+++H + S + ++ L+ MY+ CG ++ R+F L ++ W A++
Sbjct: 415 NLDIGRQIHSQTIVTDAIS-EILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMI 473
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
S + + L+ D L +FVE+ ++ D T+ +++AC +A + G +H G
Sbjct: 474 SSYVQKGLHEDGLKLFVEMQR-AKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGY 532
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
I +VF +AL+ MY KC +++ +++F+ MP RN VSWN++I +++NG + L +
Sbjct: 533 ISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEE 592
Query: 292 MMGCEEGFIPDVITVVTVL 310
M+ G PD ++++++L
Sbjct: 593 MV--RSGLQPDSVSLLSIL 609
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 89/180 (49%), Gaps = 4/180 (2%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
N F NT +I Y G ++R +FDS+ R W L+ G+ +N + + +F+E+
Sbjct: 131 NIFSTNT-MIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEM 189
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
+ PD+ + ++ V VH K+G + VSN+L+ Y K
Sbjct: 190 GRHG-IDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRS 248
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +LF +PER+ V++N+++ G+S+ GF+ E+ +L KM E G+ P T +L
Sbjct: 249 LGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQ--EVGYRPTEFTFAAIL 306
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 77/136 (56%), Gaps = 1/136 (0%)
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
++F+ + R+ +NAL++G++K + +++F ++ + +P FTF ++ A +
Sbjct: 254 QLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQ-EVGYRPTEFTFAAILTAGIQL 312
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
D+ FG VHG K + +VFV+NAL+ Y K V E KLF MPE + +S+N ++
Sbjct: 313 DDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLV 372
Query: 274 CGFSENGFSCESFDLL 289
++ NG ES +L
Sbjct: 373 TCYAWNGRVKESLELF 388
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 4/199 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
DIE G++VH V N F+ N L+ YS +++ ++F + + +N LV
Sbjct: 314 DIEFGQQVHGFVVKCNFVWNVFVANA-LLDFYSKHDRVVEASKLFYEMPEVDGISYNVLV 372
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
+ + N + L +F EL T NF F ++ ++ G +H
Sbjct: 373 TCYAWNGRVKESLELFKELQF-TGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDA 431
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
I ++ V N+L+ MY KC E ++F + ++ V W ++I + + G + L ++
Sbjct: 432 ISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVE 491
Query: 292 MMGCEEGFIPDVITVVTVL 310
M + G D T +++
Sbjct: 492 MQRAKIG--ADAATYASIV 508
>gi|302798571|ref|XP_002981045.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
gi|300151099|gb|EFJ17746.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
Length = 833
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 3/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + + G+ +H LV D ++ T L+TMY CG +R +F + RN
Sbjct: 208 LNACIGSRSLSNGRLIHALV-LERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPERN 266
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WNA+V+ T N + + + +F + + ++P +F V+ A + G +H
Sbjct: 267 VVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTPEALAEGRRIH 326
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
M + L+ + V+NAL+ MYG+C V + ++F M R+LVSWN++I ++++G +
Sbjct: 327 AMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAMERRDLVSWNAMISAYAQSGLAR 386
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E +L +M E PD IT + L
Sbjct: 387 EVVNLFHRMRA--ERVPPDRITFLMAL 411
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 111/209 (53%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L++ACG +E G+RVH V + F N RL+ MY C ++R+VFD ++ R
Sbjct: 4 LMRACGISGALEQGRRVHGHVQRHADDRSLFFGN-RLVNMYRRCSSLDEARKVFDRMRER 62
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W A++S + + L +F E++ + L P+ TF +++AC + G +
Sbjct: 63 DVVSWTAMISAYAQTGHQRQALDLFTEMAG-SSLDPNRVTFLALLEACDSPEFLEDGKQI 121
Query: 223 HGMAAKMGLI-GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
H + + L+ DV V+NA++ MY KC + + +F M ER+L+SWN+ I +E+G
Sbjct: 122 HARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESGD 181
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ LL M EG PD +T V+ L
Sbjct: 182 YTFTLALLKSMQ--LEGMAPDKVTFVSAL 208
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 108/208 (51%), Gaps = 2/208 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+AC + +E GK++H VSA +D + ++ MY C + VF ++ R
Sbjct: 105 LLEACDSPEFLEDGKQIHARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRER 164
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN ++ ++ YT L++ + + + PD TF + AC G + G +
Sbjct: 165 DLISWNNAIAANAESGDYTFTLALLKSMQLEG-MAPDKVTFVSALNACIGSRSLSNGRLI 223
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + + G+ GDV + AL+ MYG+C +E ++F MPERN+VSWN+++ + N
Sbjct: 224 HALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHF 283
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L +M+ P ++ +TVL
Sbjct: 284 AEAIELFKRMVAVAM-VEPTRVSFITVL 310
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL C + G+ +H +++ + + S+D I+ ++ MY CG +R +F+
Sbjct: 519 LLSVCDSRAFLRQGETIHRRVINQTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSH 578
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
RNL WN+++S + + + + + L PD TF ++ AC V G
Sbjct: 579 RNLASWNSMISAYALHGRAEQAFDLSERMRREGVL-PDRVTFITLLNACVAGGAVRHGKM 637
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H GL D V+NAL+ Y KC ++ LF + R++VSWN II GF+ NG
Sbjct: 638 IHARIIDSGLEKDTVVANALVNFYSKCGNLDTATSLFGALDYRDVVSWNGIIAGFAHNGH 697
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ + M ++G PD IT +T+L
Sbjct: 698 AREALKSMWLMQ--QDGVRPDAITFLTIL 724
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 110/203 (54%), Gaps = 12/203 (5%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+R+H ++ S + N L+TMY CG D+ RVF +++ R+L WNA++S +
Sbjct: 322 GRRIHAMIQERQLLSQIEVANA-LVTMYGRCGGVGDAERVFSAMERRDLVSWNAMISAYA 380
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
++ L +V+++F + ++ + PD TF + AC I D+ G VH ++ + G +
Sbjct: 381 QSGLAREVVNLFHRMRAE-RVPPDRITFLMALDACAEIRDLDSGRTVHHLSVESGFGSCI 439
Query: 236 FVSNALIAMY--------GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFD 287
V+NA + +Y + +E + +FE M R+++SWN++I G+ + G S +
Sbjct: 440 SVANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAARDVISWNTMITGYVQAGDSFSALS 499
Query: 288 LLIKMMGCEEGFIPDVITVVTVL 310
+ +M+ EG + +T +++L
Sbjct: 500 IFKRML--LEGIRGNQVTFMSLL 520
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 107/217 (49%), Gaps = 14/217 (6%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRR--------V 155
L AC +D++ G+ VH L S + F + + + +YS C S +
Sbjct: 411 LDACAEIRDLDSGRTVHHL-SVESGFGSCISVANATMHLYSSCSSSSSSSSSLMEVVAGI 469
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
F+S+ R++ WN +++G+ + LSIF + + ++ + TF ++ C A
Sbjct: 470 FESMAARDVISWNTMITGYVQAGDSFSALSIFKRMLLEG-IRGNQVTFMSLLSVCDSRAF 528
Query: 216 VGFGSGVHGMAAKMG--LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
+ G +H L D V+ A++ MYGKC ++ LFE RNL SWNS+I
Sbjct: 529 LRQGETIHRRVINQTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHRNLASWNSMI 588
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +G + ++FDL +M EG +PD +T +T+L
Sbjct: 589 SAYALHGRAEQAFDLSERMR--REGVLPDRVTFITLL 623
>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
Length = 799
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 102/179 (56%), Gaps = 3/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + + ++ MY CG +++++ D + + + WNA++SGF+ N+ F E+
Sbjct: 422 DAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEML 481
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
D LKPD+FTF V+ C +A + G +HG K ++ D ++S+ L+ MY KC +
Sbjct: 482 -DMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDM 540
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + +FE + +R+ VSWN++ICG++ +G E+ + +M +E +P+ T V VL
Sbjct: 541 PDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQ--KENVVPNHATFVAVL 597
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 87/154 (56%), Gaps = 1/154 (0%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
++T YS G + +FD + ++ WNALVSG+ + ++ + + +FVE++ + P
Sbjct: 89 MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRG-VSP 147
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D TF ++K+C + ++ G VH +A K GL DV +AL+ MYGKC +++ + F
Sbjct: 148 DRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFF 207
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
MPERN VSW S I G +N +L I+M
Sbjct: 208 YGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEM 241
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 104/214 (48%), Gaps = 11/214 (5%)
Query: 72 TLCEESKSLNKALS-LLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFS 130
+L +ES++ K S +L L AT +L C + IE+GK++H +
Sbjct: 465 SLNKESEAAQKFFSEMLDMGLKPDHFTFAT--VLDTCANLATIELGKQIHGQIIKQEMLD 522
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
+++I +T L+ MY+ CG DS VF+ ++ R+ WNA++ G+ + L + L +F +
Sbjct: 523 DEYISST-LVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERM 581
Query: 191 SSDTELKPDNFTFPCVIKACG--GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
+ + P++ TF V++AC G+ D G H M L + ++ + G+
Sbjct: 582 QKEN-VVPNHATFVAVLRACSHVGLFDDGC-RYFHLMTTHYKLEPQLEHFACMVDILGRS 639
Query: 249 AFVEEMVKLFEVMP-ERNLVSWNSI--ICGFSEN 279
+E VK MP + + V W ++ IC ++
Sbjct: 640 KGPQEAVKFINSMPFQADAVIWKTLLSICKIRQD 673
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 80/176 (45%), Gaps = 2/176 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
VLL++C +++ +G +VH L + T D + L+ MY C D+ F +
Sbjct: 153 AVLLKSCSALEELSLGVQVHAL-AVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMP 211
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN W + ++G +NE Y L +F+E+ L ++ ++C ++ + G
Sbjct: 212 ERNWVSWGSAIAGCVQNEQYVRGLELFIEMQR-LGLGVSQPSYASAFRSCAAMSCLNTGR 270
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
+H A K D V A++ +Y K + + + F +P + + N+++ G
Sbjct: 271 QLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGL 326
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 27/177 (15%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
++C + G+++H + +FS+D ++ T ++ +Y+ D+RR F L
Sbjct: 257 FRSCAAMSCLNTGRQLHAH-AIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHT 315
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ NA++ G +F+ SS ++ D + V AC G VH
Sbjct: 316 VETSNAMMVG------------LFMIRSS---IRFDVVSLSGVFSACAETKGYFPGQQVH 360
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+A K +++ +YGKC + E +F+ M +++ VSWN+II +NG
Sbjct: 361 CLAIK-----------SVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNG 406
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
D N ++ Y + V LF+ MP+ ++VSWN+++ G+ + G ES DL ++M
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEM- 140
Query: 294 GCEEGFIPDVITVVTVL 310
G PD T +L
Sbjct: 141 -ARRGVSPDRTTFAVLL 156
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
G + FVSN L+ MY +CA ++F+ MP R+ VSWN+++ +S G
Sbjct: 47 GFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAG 97
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 109/205 (53%), Gaps = 4/205 (1%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
ACG D +G+ + E + + T L+ MY+ CG +RR+FD + +R++
Sbjct: 281 ACGRLGDANLGQWIAEYAEEKGMLRSRNLA-TALVDMYAKCGELDKARRLFDRMHSRDVV 339
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
W+A++SG+T+++ + L+IF E+ TE+ P++ T V+ AC + + G VH
Sbjct: 340 AWSAMISGYTQSDRCREALAIFNEMQG-TEVNPNDVTMVSVLSACAVLGALETGKWVHSY 398
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
+ L V + AL+ Y KC +++ VK FE MP RN +W ++I G + NG S E+
Sbjct: 399 IRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREA 458
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
+L M+ E P +T + VL
Sbjct: 459 LELFSSML--EANIEPTDVTFIGVL 481
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 113/207 (54%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+++C D+ +G+ V + F++N+ LI MY+ CG + + +F +++ +
Sbjct: 178 VKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNS-LIHMYASCGDVVAAHVLFHTVQVKG 236
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WNA+++G+ KN + +V+ +F + + D T V ACG + D G +
Sbjct: 237 VIAWNAMIAGYVKNGDWKEVVEMFKGML-EVRAPFDEVTLLSVATACGRLGDANLGQWIA 295
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
A + G++ ++ AL+ MY KC +++ +LF+ M R++V+W+++I G++++
Sbjct: 296 EYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCR 355
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + +M G E P+ +T+V+VL
Sbjct: 356 EALAIFNEMQGTEVN--PNDVTMVSVL 380
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 2/148 (1%)
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R+ +N L+ F + D L +FVE+ DT + PD T +K+C + D+ G G
Sbjct: 133 RSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRG 192
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
V A K G + D FV N+LI MY C V LF + + +++WN++I G+ +NG
Sbjct: 193 VQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGD 252
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTV 309
E ++ M+ F D +T+++V
Sbjct: 253 WKEVVEMFKGMLEVRAPF--DEVTLLSV 278
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+AC K + K++H+ +T ++ +++ +L +Y C + +RR+FD +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLH-KLTRLYLSCNQVVLARRLFDEIPNP 72
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN ++ + N + + ++ + ++P+ +T+P V+KAC G+ + G +
Sbjct: 73 SVILWNQIIRAYAWNGPFDGAIDLYHSMLH-LGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A GL DVFV AL+ Y KC + E +LF M R++V+WN++I G S G
Sbjct: 132 HSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ L+++M EEG P+ T+V VLP
Sbjct: 192 DDAVQLIMQMQ--EEGICPNSSTIVGVLP 218
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 111/209 (53%), Gaps = 3/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L G K + GK +H F N ++ T L+ MY+ C L +R++FD + R
Sbjct: 216 VLPTVGEAKALGHGKALHGY-CVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVR 274
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N W+A++ G+ ++ + L +F ++ + P T V++AC + D+ G +
Sbjct: 275 NEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKL 334
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K+G + D+ + N L++MY KC +++ ++ F+ M ++ VS+++I+ G +NG +
Sbjct: 335 HCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNA 394
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ + +MM G PD+ T++ VLP
Sbjct: 395 AVALSIF-RMMQL-SGIDPDLTTMLGVLP 421
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 104/210 (49%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L+AC D+ G+++H + D ++ L++MY+ CG D+ R FD +
Sbjct: 316 GSVLRACAKLTDLSRGRKLHCYI-IKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMN 374
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
++ ++A+VSG +N LSIF + + + PD T V+ AC +A + G
Sbjct: 375 PKDSVSFSAIVSGCVQNGNAAVALSIF-RMMQLSGIDPDLTTMLGVLPACSHLAALQHGF 433
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
HG G D + NALI MY KC + ++F M ++VSWN++I G+ +G
Sbjct: 434 CSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHG 493
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L ++ G PD IT + +L
Sbjct: 494 LGMEALGLFHDLLAL--GLKPDDITFICLL 521
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 109/210 (51%), Gaps = 7/210 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFS--NDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L+AC IE G +H S + F +D + T L+ Y+ CG ++++R+F S+
Sbjct: 115 VLKACSGLLAIEDGVEIH---SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS 171
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ WNA+++G + L D + + +++ + + P++ T V+ G +G G
Sbjct: 172 HRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEG-ICPNSSTIVGVLPTVGEAKALGHGK 230
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG + V V L+ MY KC + K+F+VM RN VSW+++I G+ +
Sbjct: 231 ALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSD 290
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L +M+ ++ P +T+ +VL
Sbjct: 291 CMKEALELFDQMI-LKDAMDPTPVTLGSVL 319
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 70 ITTLCEESKSLNKALS---LLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSAS 126
I + C ++ + ALS ++Q + + DL GVL AC H ++ G H +
Sbjct: 384 IVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVL-PACSHLAALQHGFCSHGYLIVR 442
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
F+ D +I LI MYS CG +R VF+ + ++ WNA++ G+ + L + L +
Sbjct: 443 G-FATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGL 501
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGS-GVHGMAAKMGLIGDVFVSNALIAMY 245
F +L + LKPD+ TF C++ +C V G M+ ++ + ++ +
Sbjct: 502 FHDLLA-LGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDIL 560
Query: 246 GKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
G+ ++E MP E ++ W++++
Sbjct: 561 GRAGLIDEAHHFIRNMPFEPDVRIWSALL 589
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 114/209 (54%), Gaps = 7/209 (3%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V+L+AC ++ G++VH V+ F D + L+ YS+CG + RVFD +
Sbjct: 110 VVLKACTKFLGVQEGEQVHG-VAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLV 168
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ W L+SG+ + L+ + +++F+++ ++ P+ TF V+ ACG + + G G
Sbjct: 169 RDVVSWTGLISGYVRTGLFDEAINLFLKM----DVVPNVATFVSVLVACGRMGYLSMGKG 224
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VHG+ K + V NAL+ MY KC + E KLF+ +P+R++VSW SII G +
Sbjct: 225 VHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQ 284
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+S +L M G PD I + +VL
Sbjct: 285 PKDSLELFYDMQ--ISGVEPDRIILTSVL 311
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 106/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG + +GK VH LV F ++ L+ MY C ++R++FD L R
Sbjct: 209 VLVACGRMGYLSMGKGVHGLVYKRA-FGIGLVVGNALVDMYVKCECLCEARKLFDELPDR 267
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +++SG + + D L +F ++ + ++PD V+ AC + + +G V
Sbjct: 268 DIVSWTSIISGLVQCKQPKDSLELFYDMQI-SGVEPDRIILTSVLSACASLGALDYGRWV 326
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ G+ D+ + AL+ MY KC +E + +F +P RN+ +WN+++ G + +G
Sbjct: 327 QEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHG 386
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ M+G G P+ +T + +L
Sbjct: 387 HEALKHFELMIGA--GIRPNEVTFLAIL 412
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL + K I K++H + AS ++F+++ GF FD L
Sbjct: 8 LLNSIHRCKTIRSLKQIHAHLIASGLLHDEFVLSKVSEFFGKHIGF---VDYAFDFLNQT 64
Query: 163 NL----FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+L +N L++ + + ++ + + PD +TFP V+KAC V
Sbjct: 65 DLHVGTLPYNTLIAAYASSCTPKAAFLVYGRIVGNG-FVPDMYTFPVVLKACTKFLGVQE 123
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G VHG+A KMG + D++V N+L+ Y C ++F+ M R++VSW +I G+
Sbjct: 124 GEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVR 183
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ +L +KM +P+V T V+VL
Sbjct: 184 TGLFDEAINLFLKM-----DVVPNVATFVSVL 210
>gi|449447569|ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
gi|449481506|ref|XP_004156203.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
Length = 712
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 128/233 (54%), Gaps = 13/233 (5%)
Query: 67 LQEITTLCEESKSLNKALSLLQENLHNAD----LKEATGVLLQACGHEKDIEIGKRVHEL 122
L++ + + SKS +A SL+Q D + ++ +LL +C + GK++H
Sbjct: 46 LKDFASHGQLSKSF-EAFSLIQLRTSYNDSFDLILQSISILLVSCTKSSSLPPGKQLHGH 104
Query: 123 VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQ---WNALVSGFTKNEL 179
+ +S + F++ ++L+ YS F ++ + ++T NLF+ WN L++ + K++L
Sbjct: 105 IISSGLVEDSFLV-SKLVMFYSSLEFLPEAHTL---VETSNLFRPCSWNILITSYVKHKL 160
Query: 180 YTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSN 239
Y + + ++ S ++PDNFTFP ++KACG ++ FG VH +FV N
Sbjct: 161 YEAAILAYKQMVSKG-VRPDNFTFPSILKACGETQNLKFGLEVHKSINSWSTPWSLFVHN 219
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
ALI+MYG+C V+ LF+ M ER+ VSWNS+I +S G E+F+L M
Sbjct: 220 ALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYSSRGMWREAFELFESM 272
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 43/246 (17%)
Query: 103 LLQACGHEKDIEIGKRVHELV-SASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+ACG ++++ G VH+ + S ST +S ++ LI+MY CG +R +FD++
Sbjct: 186 ILKACGETQNLKFGLEVHKSINSWSTPWS--LFVHNALISMYGRCGEVDTARNLFDNMLE 243
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE--------------LKPDNFT----- 202
R+ WN+++S ++ ++ + +F + S L+ NFT
Sbjct: 244 RDAVSWNSMISCYSSRGMWREAFELFESMQSKCLEINVVTWNIIAGGCLRVGNFTQALKL 303
Query: 203 ---------------FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+ AC I + G +HG + V NAL+ MY +
Sbjct: 304 LSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHYHHMLSTVQNALVTMYAR 363
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM--GCEEGFIPDVIT 305
C + LF + +++ ++WNS++ G + G E+ L +++ G E PD +T
Sbjct: 364 CKDIRHAYMLFRLNDDKSRITWNSMLSGLTHLGRVEEALCLFRELLLFGVE----PDYVT 419
Query: 306 VVTVLP 311
++LP
Sbjct: 420 FASILP 425
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 109/242 (45%), Gaps = 11/242 (4%)
Query: 74 CEESKSLNKALSLLQE----NLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQF 129
C + +AL LL + +H D+ G L AC H I +GK +H
Sbjct: 291 CLRVGNFTQALKLLSQMRNFGIHLDDVAMIIG--LGACSHIGAIRLGKEIHGFTIRHYHH 348
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE 189
+ N L+TMY+ C + +F ++ WN+++SG T + L +F E
Sbjct: 349 MLSTVQNA-LVTMYARCKDIRHAYMLFRLNDDKSRITWNSMLSGLTHLGRVEEALCLFRE 407
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD-VFVSNALIAMYGKC 248
L ++PD TF ++ C +AD+ G H K D + + NAL+ MY +
Sbjct: 408 LLL-FGVEPDYVTFASILPLCARVADLQHGREFHCYITKHRDFRDHLLLWNALVDMYARA 466
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
V E ++F + +++ V++ S+I G+ G ++ L +M + PD IT++
Sbjct: 467 GKVSEAKRIFYSLSKKDEVTYTSLIAGYGMQGEGGKAVRLFEEMKRFQ--IKPDHITMIA 524
Query: 309 VL 310
VL
Sbjct: 525 VL 526
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 84/179 (46%), Gaps = 15/179 (8%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C D++ G+ H ++ F + ++ L+ MY+ G +++R+F SL +
Sbjct: 423 ILPLCARVADLQHGREFHCYITKHRDFRDHLLLWNALVDMYARAGKVSEAKRIFYSLSKK 482
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGI---ADVG 217
+ + +L++G+ + +F E+ ++KPD+ T V+ AC G+ A++
Sbjct: 483 DEVTYTSLIAGYGMQGEGGKAVRLFEEMKR-FQIKPDHITMIAVLSACSHSGLVNQAELL 541
Query: 218 FG--SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS-WNSII 273
F VHG++ ++ + ++G+ + + ++ MP R + W ++I
Sbjct: 542 FAEMQSVHGLSPRLEHYA------CMADLFGRVGLLNKAKEIITRMPYRPTSAIWATLI 594
>gi|297740128|emb|CBI30310.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 106/178 (59%), Gaps = 5/178 (2%)
Query: 135 INTRLITMYSLCGFPLDSRRVFD-SLKTRNL-FQWNALVSGFTKNELYTDVLSIFVELSS 192
+ T LI+MY C +R+VFD + +RNL +NAL++G++ N ++D + +F ++
Sbjct: 93 VQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRK 152
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ + + T +I C G +GFG+ +H + + GL GD+ V N L+ MY +C V+
Sbjct: 153 EG-VSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVD 211
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
KLF+ MPE+ L++WN++I G+++NG + DL KM G +PD +T+V VL
Sbjct: 212 FARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKME--FTGIVPDPVTLVGVL 267
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ C + G +H S D + L+TMY CG +R++FD + +
Sbjct: 165 LIPVCAGPIHLGFGTSLHA-CSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEK 223
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
L WNA++SG+ +N L VL ++ ++ T + PD T V+ +C + G V
Sbjct: 224 GLITWNAMISGYAQNGLAGHVLDLYRKMEF-TGIVPDPVTLVGVLSSCAHLGAHAAGREV 282
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
G + F+ NALI MY +C + + +F+ M E+N++SW +II G+ +G
Sbjct: 283 EQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQG 342
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L +M+ +E +PD V+VL
Sbjct: 343 ELAVQLFDEMISSDE--LPDGAAFVSVL 368
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 79/147 (53%), Gaps = 5/147 (3%)
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
WNA + + + + L+++ ++ + + P+ FTFP K+C ++ GS +HG
Sbjct: 24 WNARLRELARQRHFQEALNLYCQMLASGD-SPNAFTFPFAFKSCASLSLPLAGSQLHGHV 82
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF-EVMPERNL-VSWNSIICGFSENGFSCE 284
K G + FV +LI+MY KC+ + K+F E RNL V +N++I G+S N +
Sbjct: 83 IKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSD 142
Query: 285 SFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ L +M +EG + +T++ ++P
Sbjct: 143 AVLLFRQMR--KEGVSVNAVTMLGLIP 167
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 107/198 (54%), Gaps = 4/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+ +GK+ H L+ F + + L+ MY+ CG D++ FD L ++ W A+VS
Sbjct: 231 LAVGKQAHGLM-VKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVS 289
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G +N + + L+++ + + + P T ++AC GIA + G +H K GL
Sbjct: 290 GHVQNGEHEEALTLYARMDKEG-IIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLG 348
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
V +AL MY KC +E+ + +F +P+R++++WNSII GFS+NG + DL +M
Sbjct: 349 LGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEM 408
Query: 293 MGCEEGFIPDVITVVTVL 310
EG IPD IT + +L
Sbjct: 409 K--MEGTIPDNITFINIL 424
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 103/197 (52%), Gaps = 6/197 (3%)
Query: 115 IGKRVHELVSASTQFSNDFI-INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
+G+++H L+ DF+ + L+TMY+ G + VF+S + RN W+A+++G
Sbjct: 132 MGEQMHGLIVKDGLL--DFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITG 189
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
+ +N +S+F ++ + P FTF V+ A + + G HG+ K+G
Sbjct: 190 YAQNGEADSAVSMFSQMHA-AGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEV 248
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
++V +AL+ MY KC + + + F+ + E ++V W +++ G +NG E+ L +M
Sbjct: 249 QIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMD 308
Query: 294 GCEEGFIPDVITVVTVL 310
+EG IP T+ + L
Sbjct: 309 --KEGIIPSKSTIASGL 323
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 2/191 (1%)
Query: 120 HELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNEL 179
H L ++ + T L+ MY G D+RRVFD + RN F W+ +V+G+ +
Sbjct: 34 HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKC 93
Query: 180 YTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSN 239
+ +F + + + F V+ A + G +HG+ K GL+ V V N
Sbjct: 94 SEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVEN 153
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
+L+ MY K + +FE ERN ++W+++I G+++NG + + + +M GF
Sbjct: 154 SLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAA--GF 211
Query: 300 IPDVITVVTVL 310
P T V VL
Sbjct: 212 TPTEFTFVGVL 222
>gi|15240665|ref|NP_199850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171167|sp|Q9FK33.1|PP427_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g50390, chloroplastic; Flags: Precursor
gi|9758921|dbj|BAB09458.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008555|gb|AED95938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 701
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 109/193 (56%), Gaps = 8/193 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L++AC K I KRV+ + ++ +++N R++ M+ CG +D+RR+FD + R
Sbjct: 129 LVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMN-RILLMHVKCGMIIDARRLFDEIPER 187
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFV---ELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
NL+ + +++SGF Y + +F E SD E TF +++A G+ + G
Sbjct: 188 NLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCE----THTFAVMLRASAGLGSIYVG 243
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H A K+G++ + FVS LI MY KC +E+ FE MPE+ V+WN++I G++ +
Sbjct: 244 KQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALH 303
Query: 280 GFSCESFDLLIKM 292
G+S E+ LL M
Sbjct: 304 GYSEEALCLLYDM 316
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 101/210 (48%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
V+L+A I +GK++H N F+ + LI MYS CG D+R F+ +
Sbjct: 228 AVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFV-SCGLIDMYSKCGDIEDARCAFECMP 286
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ WN +++G+ + + L + ++ D+ + D FT +I+ +A +
Sbjct: 287 EKTTVAWNNVIAGYALHGYSEEALCLLYDMR-DSGVSIDQFTLSIMIRISTKLAKLELTK 345
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H + G ++ + AL+ Y K V+ +F+ +P +N++SWN+++ G++ +G
Sbjct: 346 QAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHG 405
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L KM+ P+ +T + VL
Sbjct: 406 RGTDAVKLFEKMIAA--NVAPNHVTFLAVL 433
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
T+ +++AC + + V+G G + ++ N ++ M+ KC + + +LF+ +
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
PERNL S+ SII GF G E+F+L KMM
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELF-KMM 215
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+AC K + K++H+ +T ++ +++ +L +Y C + +RR+FD +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLH-KLTRLYLSCNQVVLARRLFDEIPNP 72
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN ++ + N + + ++ + ++P+ +T+P V+KAC G+ + G +
Sbjct: 73 SVILWNQIIRAYAWNGPFDGAIDLYHSMLH-LGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A GL DVFV AL+ Y KC + E +LF M R++V+WN++I G S G
Sbjct: 132 HSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ L+++M EEG P+ T+V VLP
Sbjct: 192 DDAVQLIMQMQ--EEGICPNSSTIVGVLP 218
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 111/209 (53%), Gaps = 3/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L G K + GK +H F N ++ T L+ MY+ C L +R++FD + R
Sbjct: 216 VLPTVGEAKALGHGKALHGYC-VRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVR 274
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N W+A++ G+ ++ + L +F ++ + P T V++AC + D+ G +
Sbjct: 275 NEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKL 334
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K+G + D+ + N L++MY KC +++ ++ F+ M ++ VS+++I+ G +NG +
Sbjct: 335 HCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNA 394
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ + +MM G PD+ T++ VLP
Sbjct: 395 AVALSIF-RMMQL-SGIDPDLTTMLGVLP 421
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 6/211 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
G +L+AC D+ G+++H ++ + D ++ L++MY+ CG D+ R FD +
Sbjct: 316 GSVLRACAKLTDLSRGRKLHCYIIKLGSVL--DILLGNTLLSMYAKCGVIDDAIRFFDEM 373
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
++ ++A+VSG +N LSIF + + + PD T V+ AC +A + G
Sbjct: 374 NPKDSVSFSAIVSGCVQNGNAAVALSIF-RMMQLSGIDPDLTTMLGVLPACSHLAALQHG 432
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
HG G D + NALI MY KC + ++F M ++VSWN++I G+ +
Sbjct: 433 FCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIH 492
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ L ++ G PD IT + +L
Sbjct: 493 GLGMEALGLFHDLLAL--GLKPDDITFICLL 521
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 109/210 (51%), Gaps = 7/210 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFS--NDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L+AC IE G +H S + F +D + T L+ Y+ CG ++++R+F S+
Sbjct: 115 VLKACSGLLAIEDGVEIH---SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS 171
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ WNA+++G + L D + + +++ + + P++ T V+ G +G G
Sbjct: 172 HRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEG-ICPNSSTIVGVLPTVGEAKALGHGK 230
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG + V V L+ MY KC + K+F+VM RN VSW+++I G+ +
Sbjct: 231 ALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASD 290
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L +M+ ++ P +T+ +VL
Sbjct: 291 CMKEALELFDQMI-LKDAMDPTPVTLGSVL 319
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 70 ITTLCEESKSLNKALS---LLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSAS 126
I + C ++ + ALS ++Q + + DL GVL AC H ++ G H +
Sbjct: 384 IVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVL-PACSHLAALQHGFCSHGYLIVR 442
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
F+ D +I LI MYS CG +R VF+ + ++ WNA++ G+ + L + L +
Sbjct: 443 G-FATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGL 501
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGS-GVHGMAAKMGLIGDVFVSNALIAMY 245
F +L + LKPD+ TF C++ +C V G M+ ++ + ++ +
Sbjct: 502 FHDLLA-LGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDIL 560
Query: 246 GKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
G+ ++E MP E ++ W++++
Sbjct: 561 GRAGLIDEAHHFIRNMPFEPDVRIWSALL 589
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 109/211 (51%), Gaps = 6/211 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC + GK+VH + F D +N LI +Y CG +R+VFD + R
Sbjct: 214 VLKACAYIFGFSEGKQVHCQI-VKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPER 272
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN+++ + Y L +F E+ E PD +T V+ AC G+ + G+
Sbjct: 273 SLVSWNSMIDALVRFGEYDSALQLFREMQRSFE--PDGYTMQSVLSACAGLGSLSLGTWA 330
Query: 223 HGMAAK---MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
H + + + DV V N+LI MY KC + ++F+ M +R+L SWN++I GF+ +
Sbjct: 331 HAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATH 390
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + E+ + +M+ E P+ +T V +L
Sbjct: 391 GRAEEAMNFFDRMVDKRENVRPNSVTFVGLL 421
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 82/158 (51%), Gaps = 4/158 (2%)
Query: 154 RVFDSLKTRNLFQWNALVSGFTKN-ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
RVFDS++ + F WN L+ + + ++ ++ E PD TFP V+KAC
Sbjct: 161 RVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAY 220
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
I G VH K G GDV+V+N LI +YG C ++ K+F+ MPER+LVSWNS+
Sbjct: 221 IFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSM 280
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I G + L +M + F PD T+ +VL
Sbjct: 281 IDALVRFGEYDSALQLFREM---QRSFEPDGYTMQSVL 315
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 112/225 (49%), Gaps = 16/225 (7%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + + IG+ +H + + + T L+ MY C P R VFD + R
Sbjct: 540 VLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRR 599
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNAL++G+ +NE L +FVE+ S++E P+ TF V+ AC G+
Sbjct: 600 TVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGI 659
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K G D +V NAL+ MY + VE +F M +R++VSWN++I G G
Sbjct: 660 HGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRY 719
Query: 283 CESFDLLIKMM--GCEEG--------------FIPDVITVVTVLP 311
++ +LL +M E+G F P+ +T++TVLP
Sbjct: 720 DDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLP 764
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 124/249 (49%), Gaps = 15/249 (6%)
Query: 70 ITTLC---EESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKD-IEIGKRVHELVSA 125
I TLC E SL+ +L EN+ + + AC H + + +GK+VH A
Sbjct: 405 IATLCRFEEWELSLHLFRLMLSENVDPTSFTLVS--VAHACSHVRGGVRLGKQVH----A 458
Query: 126 STQFSNDF--IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDV 183
T + D N L+TMY+ G D++ +F ++L WN ++S ++N+ + +
Sbjct: 459 YTLRNGDLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEA 518
Query: 184 LSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG-LIGDVFVSNALI 242
L ++V L ++PD T V+ AC + + G +H A + G LI + FV AL+
Sbjct: 519 L-MYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALV 577
Query: 243 AMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
MY C ++ +F+ + R + WN+++ G++ N F ++ L ++M+ E F P+
Sbjct: 578 DMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMIS-ESEFCPN 636
Query: 303 VITVVTVLP 311
T +VLP
Sbjct: 637 ATTFASVLP 645
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 21/203 (10%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F D + L+ MYS G S+ +F + R++ WN +++G Y D L++
Sbjct: 668 FGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLH 727
Query: 189 EL-------SSDT----------ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
E+ SDT KP++ T V+ C +A +G G +H A K L
Sbjct: 728 EMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKL 787
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
DV V +AL+ MY KC + ++F+ MP RN+++WN +I + +G E+ +L
Sbjct: 788 AMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRI 847
Query: 292 MMGC----EEGFIPDVITVVTVL 310
M E P+ +T + +
Sbjct: 848 MTAGGGSNREVIRPNEVTYIAIF 870
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 119/256 (46%), Gaps = 24/256 (9%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATG------------------VLLQACGHEKDIEIGK 117
E +S ++ + LL+ H++ ++A +L+A D+ +GK
Sbjct: 291 ERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGK 350
Query: 118 RVHELV-SASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
++H V + + L+ MY CG +R+VFD + R+ WN++++ +
Sbjct: 351 QIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCR 410
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI-ADVGFGSGVHGMAAKMGLIGDV 235
E + L +F + S+ + P +FT V AC + V G VH + G +
Sbjct: 411 FEEWELSLHLFRLMLSEN-VDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDL-RT 468
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+ +NAL+ MY + V + LF V ++LVSWN++I S+N E+ + M+
Sbjct: 469 YTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMI-- 526
Query: 296 EEGFIPDVITVVTVLP 311
+G PD +T+ +VLP
Sbjct: 527 VDGVRPDGVTLASVLP 542
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
++ R+ QW L+ T + + D +S + + + DNF FP V+KA + D+
Sbjct: 290 VERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPP-DNFAFPAVLKAAAAVHDLCL 348
Query: 219 GSGVHGMAAKMGLI--GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII--- 273
G +H K G V V+N+L+ MYGKC + ++F+ +P+R+ VSWNS+I
Sbjct: 349 GKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATL 408
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
C F E S F L++ E P T+V+V
Sbjct: 409 CRFEEWELSLHLFRLML-----SENVDPTSFTLVSV 439
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C + GK +H + + + D + + L+ MY+ CG + RVFD + R
Sbjct: 762 VLPGCAALAALGKGKEIHAY-AVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIR 820
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELS----SDTE-LKPDNFTFPCVIKAC--GGIAD 215
N+ WN L+ + + + L +F ++ S+ E ++P+ T+ + AC G+ D
Sbjct: 821 NVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVD 880
Query: 216 VGFGSGVHGMAAKMGL--IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE--RNLVSWNS 271
G H M A G+ GD + L+ + G+ V+E +L MP + +W+S
Sbjct: 881 EGL-HLFHTMKASHGVEPRGDHYA--CLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSS 937
Query: 272 II 273
++
Sbjct: 938 LL 939
>gi|297741134|emb|CBI31865.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 114/209 (54%), Gaps = 7/209 (3%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V+L+AC ++ G++VH V+ F D + L+ YS+CG + RVFD +
Sbjct: 110 VVLKACTKFLGVQEGEQVHG-VAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLV 168
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ W L+SG+ + L+ + +++F+++ ++ P+ TF V+ ACG + + G G
Sbjct: 169 RDVVSWTGLISGYVRTGLFDEAINLFLKM----DVVPNVATFVSVLVACGRMGYLSMGKG 224
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VHG+ K + V NAL+ MY KC + E KLF+ +P+R++VSW SII G +
Sbjct: 225 VHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQ 284
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+S +L M G PD I + +VL
Sbjct: 285 PKDSLELFYDMQ--ISGVEPDRIILTSVL 311
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 106/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG + +GK VH LV F ++ L+ MY C ++R++FD L R
Sbjct: 209 VLVACGRMGYLSMGKGVHGLVYKRA-FGIGLVVGNALVDMYVKCECLCEARKLFDELPDR 267
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +++SG + + D L +F ++ + ++PD V+ AC + + +G V
Sbjct: 268 DIVSWTSIISGLVQCKQPKDSLELFYDMQI-SGVEPDRIILTSVLSACASLGALDYGRWV 326
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ G+ D+ + AL+ MY KC +E + +F +P RN+ +WN+++ G + +G
Sbjct: 327 QEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHG 386
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ M+G G P+ +T + +L
Sbjct: 387 HEALKHFELMIGA--GIRPNEVTFLAIL 412
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL + K I K++H + AS ++F+++ GF FD L
Sbjct: 8 LLNSIHRCKTIRSLKQIHAHLIASGLLHDEFVLSKVSEFFGKHIGF---VDYAFDFLNQT 64
Query: 163 NL----FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+L +N L++ + + ++ + + PD +TFP V+KAC V
Sbjct: 65 DLHVGTLPYNTLIAAYASSCTPKAAFLVYGRIVGNG-FVPDMYTFPVVLKACTKFLGVQE 123
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G VHG+A KMG + D++V N+L+ Y C ++F+ M R++VSW +I G+
Sbjct: 124 GEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVR 183
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ +L +KM +P+V T V+VL
Sbjct: 184 TGLFDEAINLFLKM-----DVVPNVATFVSVL 210
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 106/178 (59%), Gaps = 5/178 (2%)
Query: 135 INTRLITMYSLCGFPLDSRRVFD-SLKTRNL-FQWNALVSGFTKNELYTDVLSIFVELSS 192
+ T LI+MY C +R+VFD + +RNL +NAL++G++ N ++D + +F ++
Sbjct: 93 VQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRK 152
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ + + T +I C G +GFG+ +H + + GL GD+ V N L+ MY +C V+
Sbjct: 153 EG-VSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVD 211
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
KLF+ MPE+ L++WN++I G+++NG + DL KM G +PD +T+V VL
Sbjct: 212 FARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKME--FTGIVPDPVTLVGVL 267
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ C + G +H S D + L+TMY CG +R++FD + +
Sbjct: 165 LIPVCAGPIHLGFGTSLHA-CSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEK 223
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
L WNA++SG+ +N L VL ++ ++ T + PD T V+ +C + G V
Sbjct: 224 GLITWNAMISGYAQNGLAGHVLDLYRKMEF-TGIVPDPVTLVGVLSSCAHLGAHAAGREV 282
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
G + F+ NALI MY +C + + +F+ M E+N++SW +II G+ +G
Sbjct: 283 EQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQG 342
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L +M+ +E +PD V+VL
Sbjct: 343 ELAVQLFDEMISSDE--LPDGAAFVSVL 368
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 79/147 (53%), Gaps = 5/147 (3%)
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
WNA + + + + L+++ ++ + + P+ FTFP K+C ++ GS +HG
Sbjct: 24 WNARLRELARQRHFQEALNLYCQMLASGD-SPNAFTFPFAFKSCASLSLPLAGSQLHGHV 82
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF-EVMPERNL-VSWNSIICGFSENGFSCE 284
K G + FV +LI+MY KC+ + K+F E RNL V +N++I G+S N +
Sbjct: 83 IKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSD 142
Query: 285 SFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ L +M +EG + +T++ ++P
Sbjct: 143 AVLLFRQMR--KEGVSVNAVTMLGLIP 167
>gi|449482323|ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Cucumis sativus]
Length = 716
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 147/295 (49%), Gaps = 21/295 (7%)
Query: 26 PQFPATVIQRNKHSLRSIFKEK----SSLSLSAKTNNASTQGLHFLQEITTLCEESKSLN 81
P ++ + ++ R F EK SSL L K +A +++ ++K L
Sbjct: 44 PPSKIKIVSKFRNRKRPTFAEKDAFPSSLPLHTKNPHA------IYEDVQRFARQNK-LK 96
Query: 82 KALSLLQENLHNADLKEAT--GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
+AL+++ AT L+ AC K + K++H + + +N+FI TRL
Sbjct: 97 EALTIMDYVDQQGIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGLENNEFI-RTRL 155
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG--FTKNELYTDVLSIFVELSS-DTEL 196
+ MY+ CG +++++FD +++++ WNAL+ G Y +LS + E+ EL
Sbjct: 156 VHMYTACGSLEEAQKLFDESSSKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVEL 215
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
+ ++F +IK+ G + G HG+ K GLIG + L+ MY KC ++ +
Sbjct: 216 --NVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQ 273
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+F + ER++V W SII GF+ N E+ + +M+ ++G P+ + + T+LP
Sbjct: 274 MFGEITERDVVVWGSIIAGFAHNRLQREALEYTRRMI--DDGIRPNSVILTTILP 326
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
+G+ VH V + +S I + LI MY CG R VF + RN W AL+SG
Sbjct: 335 RLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSG 394
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
+ N + + + + +PD T ++ C + + G +H A K +
Sbjct: 395 YALNGRLEQAVRSVIWMQQEG-FRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLP 453
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
+V + ++L+ MY KC ++ +KLF M +RN++ W ++I + EN E+ D+ M
Sbjct: 454 NVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQ 513
Query: 294 GCEEGFIPDVITVVTVL 310
+ PD +T+ +L
Sbjct: 514 LSKHR--PDTVTMSRIL 528
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L C + + GK +H + N I+++ L+ MYS CG + ++F+ ++
Sbjct: 424 ATILPVCAQLRALRPGKEIHAYAMKNCFLPNVSIVSS-LMVMYSKCGVMDYTLKLFNGME 482
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN+ W A++ + +N+ + + IF + ++ +PD T ++ C + G
Sbjct: 483 QRNVILWTAMIDSYIENQCPHEAIDIFRAMQL-SKHRPDTVTMSRILYICSEQKMLKMGK 541
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG K FVS L+ +YGKC V+ +FE +P + ++W +II + E+G
Sbjct: 542 EIHGQVLKRKFEPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEAYGESG 601
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL +M G P+ T VL
Sbjct: 602 EFQEAIDLFDRMRS--RGISPNHFTFKVVL 629
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 4/179 (2%)
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
++ T L+ MY CG +R++F + R++ W ++++GF N L + L + D
Sbjct: 253 LLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFAHNRLQREALE-YTRRMID 311
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM-GLIGDVFVSNALIAMYGKCAFVE 252
++P++ ++ G I G VH K +F+ +ALI MY KC +
Sbjct: 312 DGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIG 371
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+F ERN + W +++ G++ NG ++ +I M +EGF PD++TV T+LP
Sbjct: 372 SGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQ--QEGFRPDIVTVATILP 428
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 109/195 (55%), Gaps = 8/195 (4%)
Query: 119 VHELVSASTQFSNDFIIN-TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKN 177
++E ++ +N ++ T ++MY CG + +VF + TRN+ WN +++G+ +N
Sbjct: 415 IYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQN 474
Query: 178 ELYTDVLSIFVELSS--DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
D++ +F LSS +PD T +++ACG +A + G VH A K+GL D
Sbjct: 475 ---GDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDT 531
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
V+ +LI MY KC V E +F+ M R+ V+WN+++ G+ ++G E+ DL +M+
Sbjct: 532 VVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRML-- 589
Query: 296 EEGFIPDVITVVTVL 310
+E P+ IT+ V+
Sbjct: 590 KERVSPNEITLTAVI 604
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 116/213 (54%), Gaps = 9/213 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC + +E G+++H +V A D + T LITMYS CG + VF + R
Sbjct: 163 ILKACNNYSILEKGRKIHTIVKA-MGMETDVAVATALITMYSKCGEISVACEVFHKMTER 221
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A++ ++ + ++ ++ + P+ TF ++ +C + G +
Sbjct: 222 NVVSWTAIIQANAQHRKLNEAFELYEQMLQ-AGISPNAVTFVSLLNSCNTPEALNRGRRI 280
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H ++ GL D+ V+NALI MY KC V+E ++F+ M +R+++SW+++I G++++G+
Sbjct: 281 HSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYK 340
Query: 283 -----CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E F LL +M EG P+ +T +++L
Sbjct: 341 DKESIDEVFQLLERMR--REGVFPNKVTFMSIL 371
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 42/273 (15%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
+ + LN+A L ++ L A LL +C + + G+R+H +S D
Sbjct: 235 QHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHIS-ERGLETDM 293
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI-----FV 188
I+ LITMY C ++R +FD + R++ W+A+++G+ ++ Y D SI +
Sbjct: 294 IVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSG-YKDKESIDEVFQLL 352
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
E + P+ TF +++AC + G +H +K+G D + A+ MY KC
Sbjct: 353 ERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKC 412
Query: 249 AFVEEMVKLFEVMPERNL-------------------------------VSWNSIICGFS 277
+ E ++F M +N+ VSWN +I G++
Sbjct: 413 GSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYA 472
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+NG + F+LL M EGF PD +TV+T+L
Sbjct: 473 QNGDIVKVFELLSSMKA--EGFQPDRVTVITIL 503
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +++ C + E GK VH+ + D + LI YS + +VF +
Sbjct: 60 GCVIEHCAKARRFEDGKMVHKQLD-ELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMT 118
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ W+++++ + N F E +D ++P+ TF ++KAC + + G
Sbjct: 119 LRDVVTWSSMIAAYAGNNHPAKAFDTF-ERMTDANIEPNRITFLSILKACNNYSILEKGR 177
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H + MG+ DV V+ ALI MY KC + ++F M ERN+VSW +II +++
Sbjct: 178 KIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHR 237
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F+L +M+ + G P+ +T V++L
Sbjct: 238 KLNEAFELYEQML--QAGISPNAVTFVSLL 265
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 8/175 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG +E GK VH + +D ++ T LI MYS CG ++R VFD + R
Sbjct: 502 ILEACGALAGLERGKLVH-AEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNR 560
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA+++G+ ++ + + +F + + + P+ T VI AC V G +
Sbjct: 561 DTVAWNAMLAGYGQHGDGLEAVDLFKRMLKE-RVSPNEITLTAVISACSRAGLVQEGREI 619
Query: 223 HGMAA---KMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
M KM + ++ + G+ ++E + + MP E ++ W++++
Sbjct: 620 FRMMQEDFKMTPRKQHY--GCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALL 672
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC K + G+ +H +S S+D I LI+MY+ CG +R +F+++ R
Sbjct: 391 VLNACSTSKALGAGELIHSHIS-EVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKR 449
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WNA+++G+ + E + + ++ ++ S+ +KP TF ++ AC + G +
Sbjct: 450 DLISWNAIIAGYARREDRGEAMKLYKQMQSEG-VKPGRVTFLHLLSACTNSSAYSDGKMI 508
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G+ + ++NAL+ MY +C + E +FE R+++SWNS+I G +++G
Sbjct: 509 HEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSY 568
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L ++M +EG PD IT +VL
Sbjct: 569 EAAYKLFLEMK--KEGLEPDKITFASVL 594
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 113/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + GK +HE + S SN + N L+ MY CG ++++ VF+ + R
Sbjct: 492 LLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANA-LMNMYRRCGSIMEAQNVFEGTRAR 550
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN++++G ++ Y +F+E+ + L+PD TF V+ C + G +
Sbjct: 551 DIISWNSMIAGHAQHGSYEAAYKLFLEMKKEG-LEPDKITFASVLVGCKNPEALELGRQI 609
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + + GL DV + NALI MY +C +++ ++F + RN++SW ++I GF++ G
Sbjct: 610 HMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGED 669
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F+L +M +GF P T ++L
Sbjct: 670 RKAFELFWQMQ--NDGFKPVKSTFSSIL 695
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 113/210 (53%), Gaps = 8/210 (3%)
Query: 103 LLQACGHEKDIEIGKRV--HELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L+AC ++ GK+V H L S + D + LI+ YS G D+R+VFD +
Sbjct: 694 ILKACMSSACLDEGKKVIAHILNSG---YELDTGVGNALISAYSKSGSMTDARKVFDKMP 750
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ WN +++G+ +N L L ++ + + + F+F ++ AC + + G
Sbjct: 751 NRDIMSWNKMIAGYAQNGLGGTALQFAYQMQ-EQGVVLNKFSFVSILNACSSFSALEEGK 809
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH K + GDV V ALI+MY KC +EE ++F+ E+N+V+WN++I ++++G
Sbjct: 810 RVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHG 869
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ D M +EG PD T ++L
Sbjct: 870 LASKALDFFNCMD--KEGIKPDGSTFTSIL 897
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C + + +E+G+++H L+ S D + LI MY CG D+ VF SL+ R
Sbjct: 593 VLVGCKNPEALELGRQIHMLIIESG-LQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHR 651
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A++ GF +F ++ +D KP TF ++KAC A + G V
Sbjct: 652 NVMSWTAMIGGFADQGEDRKAFELFWQMQNDG-FKPVKSTFSSILKACMSSACLDEGKKV 710
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
G D V NALI+ Y K + + K+F+ MP R+++SWN +I G+++NG
Sbjct: 711 IAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLG 770
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +M E+G + + + V++L
Sbjct: 771 GTALQFAYQMQ--EQGVVLNKFSFVSIL 796
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 107/198 (54%), Gaps = 4/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
++ GKR+H+L + + ++D + T L TM+ CG +++ ++ R++ +NAL++
Sbjct: 300 LDEGKRIHKL-AVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIA 358
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
++ Y + + ++ SD + + T+ V+ AC +G G +H +++G
Sbjct: 359 ALAQHGHYEEAFEQYYQMRSDGVVM-NRTTYLSVLNACSTSKALGAGELIHSHISEVGHS 417
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
DV + N+LI+MY +C + +LF MP+R+L+SWN+II G++ E+ L +M
Sbjct: 418 SDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQM 477
Query: 293 MGCEEGFIPDVITVVTVL 310
EG P +T + +L
Sbjct: 478 Q--SEGVKPGRVTFLHLL 493
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
L+Q C ++ + KR+H ++V A D ++ LI MY C D+ +VF +
Sbjct: 88 LVQNCTRKRSLAEAKRIHAQMVEAGV--GPDIFLSNLLINMYVKCRSVSDAHQVFLKMPR 145
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ WN+L+S + + +F E+ + P T+ ++ AC A++ +G
Sbjct: 146 RDVISWNSLISCYAQQGFKKKAFQLFEEMQT-AGFIPSKITYISILTACCSPAELEYGKK 204
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H + G D V N+L+ MYGKC + ++F + R++VS+N+++ +++ +
Sbjct: 205 IHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAY 264
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E L +M EG PD +T + +L
Sbjct: 265 VEECIGLFGQM--SSEGIPPDKVTYINLL 291
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 106/209 (50%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L AC ++E GK++H +++ A Q D + L+ MY C +R+VF +
Sbjct: 189 ILTACCSPAELEYGKKIHSKIIEAGYQ--RDPRVQNSLLNMYGKCEDLPSARQVFSGIYR 246
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ +N ++ + + + + +F ++SS+ + PD T+ ++ A + + G
Sbjct: 247 RDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEG-IPPDKVTYINLLDAFTTPSMLDEGKR 305
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H +A GL D+ V AL M+ +C V + E +R++V +N++I +++G
Sbjct: 306 IHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGH 365
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F+ +M +G + + T ++VL
Sbjct: 366 YEEAFEQYYQMR--SDGVVMNRTTYLSVL 392
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 5/162 (3%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L AC +E GKRVH E+V Q D + LI+MY+ CG +++ VFD+
Sbjct: 795 ILNACSSFSALEEGKRVHAEIVKRKMQ--GDVRVGAALISMYAKCGSLEEAQEVFDNFTE 852
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N+ WNA+++ + ++ L + L F + + +KPD TF ++ AC V G+
Sbjct: 853 KNVVTWNAMINAYAQHGLASKALDFFNCMDKEG-IKPDGSTFTSILSACNHSGLVMEGNR 911
Query: 222 V-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ + ++ GL + L+ + G+ +E L MP
Sbjct: 912 IFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMP 953
>gi|297841909|ref|XP_002888836.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334677|gb|EFH65095.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 744
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 120/238 (50%), Gaps = 12/238 (5%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHE-LVSASTQFSNDFI 134
S L +ALSL + A L QAC ++++ G +H ++S +S + I
Sbjct: 38 RSGDLRRALSLFYCAPVELQSQHAYAALFQACADQRNLRDGINLHHHMLSHPYCYSQNVI 97
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ LITMY+ CG L +R+VFD++ RN+ W AL++G+ + D +F + +
Sbjct: 98 LANYLITMYAKCGNILYARQVFDTMPERNVVSWTALITGYAQAGNEQDGFCLFSSMLA-- 155
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC---AFV 251
P+ F V+ C G VHG+A K+GL ++V+NALI+MYG+C
Sbjct: 156 HCCPNEFALSSVLTLC----RYEPGKQVHGLALKLGLYCSIYVANALISMYGRCHDGTAA 211
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
E +FE M +NLV+WNS+I F ++ + ++M GF D TV+ +
Sbjct: 212 YEAWTVFEAMEFKNLVTWNSMIAAFQCCNLGKQAIGVFMRMHSDGVGF--DRATVLNI 267
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 135 INTRLITMYS-LCGFPLDSRRVFDSL-KTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
+ T L+ +YS + G D ++F + R++ W +++ F + +L +F +L
Sbjct: 304 VATALVKVYSEILGEFTDCYKLFMEMSHCRDIVAWTGIITAFAVYDPERAIL-LFGQLRH 362
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ +L PD +TF V+KAC G+ +H K G D V+N+LI Y KC ++
Sbjct: 363 E-KLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFATDTVVNNSLIHAYAKCGSLD 421
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENG 280
++F+ M R++VSWNS++ +S +G
Sbjct: 422 LCKRVFDDMDSRDVVSWNSLLKAYSLHG 449
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F+ D ++N LI Y+ CG +RVFD + +R++ WN+L+ ++ + +L +F
Sbjct: 400 FATDTVVNNSLIHAYAKCGSLDLCKRVFDDMDSRDVVSWNSLLKAYSLHGQVDSILPVFQ 459
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV-HGMAAKMGLIGDVFVSNALIAMYGK 247
++ ++KPD+ TF ++ AC V G + M K + + +I M G+
Sbjct: 460 KM----DIKPDSATFIALLSACSHAGRVKEGLRIFRSMFEKPETLPQLNHYACVIDMLGR 515
Query: 248 C---AFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
A EE++K + P+ V W++++ ++G
Sbjct: 516 AERFAEAEEVIKQMPMGPD--AVVWSTLLGSCRKHG 549
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 42/221 (19%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCG---FPLDSRRVFDSLKTRNLFQWNAL 170
E GK+VH L + + ++ N LI+MY C ++ VF++++ +NL WN++
Sbjct: 174 EPGKQVHGLALKLGLYCSIYVANA-LISMYGRCHDGTAAYEAWTVFEAMEFKNLVTWNSM 232
Query: 171 VSGFTKNELYTDVLSIFVELSSD-------------------TELKPDNFTFPCVIKACG 211
++ F L + +F+ + SD ++L PD + C+
Sbjct: 233 IAAFQCCNLGKQAIGVFMRMHSDGVGFDRATVLNICTTLYKSSDLDPDQVSKCCL----- 287
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC-AFVEEMVKLFEVMPE-RNLVSW 269
+H + K GL+ V+ AL+ +Y + + KLF M R++V+W
Sbjct: 288 ---------QLHSLTVKSGLVTQTEVATALVKVYSEILGEFTDCYKLFMEMSHCRDIVAW 338
Query: 270 NSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
II F+ + E LL + E PD T +VL
Sbjct: 339 TGIITAFAV--YDPERAILLFGQLR-HEKLSPDWYTFSSVL 376
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
+V ++N LI MY KC + ++F+ MPERN+VSW ++I G+++ G + F L M+
Sbjct: 95 NVILANYLITMYAKCGNILYARQVFDTMPERNVVSWTALITGYAQAGNEQDGFCLFSSML 154
Query: 294 G--CEEGF-IPDVITVVTVLP 311
C F + V+T+ P
Sbjct: 155 AHCCPNEFALSSVLTLCRYEP 175
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 97/183 (53%), Gaps = 8/183 (4%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
D ++ + L MY+ CG D+RRVFD + R+ W A+V + + +F+ +
Sbjct: 200 GDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHM 259
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
++P+ FT+ V++AC A FG VHG AK G F +AL+ MY KC
Sbjct: 260 LRTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGD 319
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES---FDLLIKMMGCEEGFIPDVITVV 307
+ V++FE M + +LVSW ++I G+++NG E+ FD+ ++ G PD +T V
Sbjct: 320 MGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLR-----SGIKPDHVTFV 374
Query: 308 TVL 310
VL
Sbjct: 375 GVL 377
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL-------SSDTELKPDNFTFP 204
+R +FD + R+ F W+ALVSG+T++ L+++ + +D E +
Sbjct: 114 ARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYRRMQEEPGNDGADNEFTASSALAA 173
Query: 205 CVIKACGGIADVGFGSGVHGMAAKMGLI---GDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
CG G +H + G+ GD + +AL MY KC V++ ++F+ M
Sbjct: 174 AAAARCGRA-----GRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRM 228
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
P R+ VSW +++ + + G E F L + M+ G P+ T VL
Sbjct: 229 PVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRT-RGVRPNEFTYAGVL 276
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC G++VH ++ S + F + L+ MYS CG + RVF+++
Sbjct: 275 VLRACAQFAVESFGRQVHGRMAKSGTGDSCFA-ESALLRMYSKCGDMGSAVRVFEAMAKP 333
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGF 218
+L W A++SG+ +N + L F ++ + +KPD+ TF V+ AC G+ D G
Sbjct: 334 DLVSWTAVISGYAQNGQPEEALRYF-DMFLRSGIKPDHVTFVGVLSACAHAGLVDKGL 390
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L +A D+ +G+ +H +V + S F+ N+ L+ MYS+ G + +VF+ + R
Sbjct: 142 LFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNS-LVHMYSVLGSLXSAYQVFEIMSYR 200
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN++++GF N + + L+++ E+ S+ ++PD FT ++ AC + + G V
Sbjct: 201 DRVAWNSVINGFALNGMPNEALTLYREMGSEG-VEPDGFTMVSLLSACVELGALALGERV 259
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K+GL+ + SNAL+ +Y KC + K+F+ M ER++VSW S+I G + NG
Sbjct: 260 HMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLG 319
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L ++ +G P IT V VL
Sbjct: 320 NEALKLFGELE--RQGLKPSEITFVGVL 345
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 89/157 (56%), Gaps = 2/157 (1%)
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
++F+ ++ N+F WN ++ GF ++E + + +F ++ + + + PD TFP + KA +
Sbjct: 90 QIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKL 149
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
DV G G+H + + G FV N+L+ MY + ++FE+M R+ V+WNS+I
Sbjct: 150 MDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVI 209
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
GF+ NG E+ L +M EG PD T+V++L
Sbjct: 210 NGFALNGMPNEALTLYREM--GSEGVEPDGFTMVSLL 244
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 119/238 (50%), Gaps = 12/238 (5%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
E K+L+ + +LQ + + G +L+AC + + G +H + S + D +
Sbjct: 458 EEKTLSLFVWMLQSGMEPDEF--TYGSVLKACAGWQALNCGMEIHNRIIKS-RLGLDSFV 514
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT---KNELYTDVLSIFVELSS 192
LI MYS CG + ++ D L + + WNA++SGF+ ++E S +E+
Sbjct: 515 GIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGV 574
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
D PDNFT+ ++ C + V G +H K L D ++S+ L+ MY KC ++
Sbjct: 575 D----PDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQ 630
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +FE P R+ V+WN+++CG++++G E+ + M E P+ T + VL
Sbjct: 631 DFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQ--LENVKPNHATFLAVL 686
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 8/244 (3%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADL---KEATGVLLQACGHEKDIEIGKRVHELVSAS 126
I C ++ L L L +E + A + + + ++C + +G ++H +
Sbjct: 246 IIAGCVQNDDLRGGLELFKE-MQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGH-ALK 303
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
T F D +I T + MY C D++++F+SL NL +NA++ G+ +++ + L +
Sbjct: 304 TDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGM 363
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
F L + L D + +AC I G VHG++ K ++ V+NA++ MYG
Sbjct: 364 F-RLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYG 422
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
KC + E +FE M R+ VSWN+II +NG ++ L + M+ + G PD T
Sbjct: 423 KCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWML--QSGMEPDEFTY 480
Query: 307 VTVL 310
+VL
Sbjct: 481 GSVL 484
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC-----------GFPLD 151
+ Q C K + GK+ H + T+F + LI MY C G P
Sbjct: 48 IFQECSDRKALCPGKQAHARM-ILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQR 106
Query: 152 --------------------SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
++++FD++ R++ WN+L+SG+ N + V+ +F+++
Sbjct: 107 DTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMG 166
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ D TF V+K+C + D G G +HG+A KMG DV +AL+ MY KC +
Sbjct: 167 RMGTV-FDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKL 225
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSEN 279
+ ++ F MPE+N VSW++II G +N
Sbjct: 226 DCSIQFFHSMPEKNWVSWSAIIAGCVQN 253
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 20/223 (8%)
Query: 85 SLLQENLHNADLKEATGVLLQ------------------ACGHEKDIEIGKRVHELVSAS 126
SL+ LHN D ++ V LQ +C +D G ++H L +
Sbjct: 144 SLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGL-AVK 202
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
F D + + L+ MY+ C S + F S+ +N W+A+++G +N+ L +
Sbjct: 203 MGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLEL 262
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
F E+ + TF V ++C G++ + GS +HG A K DV + A + MY
Sbjct: 263 FKEMQK-AGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYM 321
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL 289
KC + + KLF +P NL S+N+II G++ + E+ +
Sbjct: 322 KCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMF 364
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 107/206 (51%), Gaps = 9/206 (4%)
Query: 72 TLCEESKSLNKALS-LLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFS 130
+L ++S+ K S +L+ + + AT +L C + +E+GK++H + +
Sbjct: 554 SLQKQSEEAQKTFSKMLEMGVDPDNFTYAT--ILDTCANLVTVELGKQIHAQI-IKKELQ 610
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
+D I++ L+ MYS CG D + +F+ R+ WNA+V G+ ++ L + L IF E
Sbjct: 611 SDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIF-EY 669
Query: 191 SSDTELKPDNFTFPCVIKACG--GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
+KP++ TF V++ACG G+ + G H M + GL + + ++ + G+
Sbjct: 670 MQLENVKPNHATFLAVLRACGHMGLVEKGLHY-FHSMLSNYGLDPQLEHYSCVVDIMGRS 728
Query: 249 AFVEEMVKLFEVMP-ERNLVSWNSII 273
V + ++L E MP E + V W +++
Sbjct: 729 GQVSKALELIEGMPFEADAVIWRTLL 754
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
TE KP F C+I+ +D+ F V GM + D NA++ Y +
Sbjct: 71 TEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQR-----DTVSWNAMLFGYAGRGDIG 125
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
KLF+ MPER++VSWNS+I G+ NG + D+ ++M G + D T VL
Sbjct: 126 VAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQM--GRMGTVFDRTTFAVVL 181
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
TF + + C + G H VFV+N LI MY KC+ +E K+F+ M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 262 PERNLVSWNSIICGFSENG 280
P+R+ VSWN+++ G++ G
Sbjct: 104 PQRDTVSWNAMLFGYAGRG 122
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 114/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+A + + K++H L+ + D + LI +YS C DSR VFD +K +
Sbjct: 460 LLRASASLTSLGLSKQIHGLM-FKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVK 518
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN++ SG+ + + L++F+EL + +PD FTF ++ A G +A + G
Sbjct: 519 DLVIWNSMFSGYVQQSENEEALNLFLELQLSRD-RPDEFTFVDMVTAAGNLASLQLGQEF 577
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K GL + +++NAL+ MY KC E+ K F+ R++V WNS+I ++ +G
Sbjct: 578 HCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEG 637
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L KMM C EG P+ IT V VL
Sbjct: 638 RKALQMLEKMM-C-EGIEPNYITFVGVL 663
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 112/216 (51%), Gaps = 9/216 (4%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A +L +C +E G +VH + ND + LI MY+ C ++R+VFD
Sbjct: 352 ACSSILTSCASLHALEFGTQVHA-YTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDI 410
Query: 159 LKTRNLFQWNALVSGF----TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
++ +NA++ G+ T+ EL+ D L+IF ++ ++P TF +++A +
Sbjct: 411 FAADDVVLFNAMIEGYSRLGTQWELH-DALNIFHDMRFRL-IRPSLLTFVSLLRASASLT 468
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+G +HG+ K GL D+F +ALIA+Y C +++ +F+ M ++LV WNS+
Sbjct: 469 SLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFS 528
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G+ + + E+ +L +++ + PD T V ++
Sbjct: 529 GYVQQSENEEALNLFLELQLSRDR--PDEFTFVDMV 562
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
++F D + T LI Y G +R VFD+L ++ W ++SG K L +
Sbjct: 177 SRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQL 236
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
F +L + + PD + V+ AC + + G +H + G D + N LI Y
Sbjct: 237 FYQLM-EGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYV 295
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
KC V KLF+ MP +N++SW +++ G+ +N E+ +L M + G PD+
Sbjct: 296 KCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSM--PKFGLKPDMFAC 353
Query: 307 VTVL 310
++L
Sbjct: 354 SSIL 357
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 89/185 (48%), Gaps = 12/185 (6%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D ++ L+ +YS G + +R+VF+ + RNL W+ +VS + Y + L +F++
Sbjct: 78 DTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFW 137
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSG------VHGMAAKMGLIGDVFVSNALIAMY 245
+ P+ + I+AC G+ GSG + K DV+V LI Y
Sbjct: 138 RTRKNSPNEYILSSFIQACSGLD----GSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFY 193
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
K ++ +F+ +PE++ V+W ++I G + G S S L ++M E +PD
Sbjct: 194 LKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM--EGNVVPDGYI 251
Query: 306 VVTVL 310
+ TVL
Sbjct: 252 LSTVL 256
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 87/179 (48%), Gaps = 3/179 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ A G+ +++G+ H + N +I N L+ MY+ CG P D+ + FDS +R
Sbjct: 561 MVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNA-LLDMYAKCGSPEDAHKAFDSAASR 619
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+++S + + L + ++ + ++P+ TF V+ AC V G
Sbjct: 620 DVVCWNSVISSYANHGEGRKALQMLEKMMCEG-IEPNYITFVGVLSACSHAGLVEDGLKQ 678
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSENG 280
+ + G+ + ++++ G+ + E +L E MP + + W S++ G ++ G
Sbjct: 679 FELMLRFGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAG 737
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VHG GL D ++SN L+ +Y + + K+FE MPERNLV+W++++ + +GF
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125
Query: 282 SCESF 286
ES
Sbjct: 126 YEESL 130
>gi|302754546|ref|XP_002960697.1| hypothetical protein SELMODRAFT_73641 [Selaginella moellendorffii]
gi|300171636|gb|EFJ38236.1| hypothetical protein SELMODRAFT_73641 [Selaginella moellendorffii]
Length = 462
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 104/185 (56%), Gaps = 2/185 (1%)
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
S F + F+ N+ L+ MY+ CG +DSRRVFD ++ ++ WN+L+SG+ N+ L
Sbjct: 159 SLTFWDLFVANS-LVDMYAKCGSMVDSRRVFDGMRRHDVVSWNSLISGYADNDQGEAALE 217
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
+FV + + D+ TF +KACG + + G +HG ++GL DV ++ +L+ Y
Sbjct: 218 LFVPMELEG-CAHDSRTFLASLKACGCVGALDIGRTLHGKIRELGLDSDVVIATSLVDFY 276
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
GKC + + ++F + +++V+WN+++ G+S G + F +MM PD +T
Sbjct: 277 GKCGSMVDAEQVFSSIVTKDIVAWNALLTGYSRQGDTEALFQAFDRMMASRPRVRPDGVT 336
Query: 306 VVTVL 310
+ VL
Sbjct: 337 FLCVL 341
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 92/174 (52%), Gaps = 6/174 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+ACG ++IG+ +H + +D +I T L+ Y CG +D+ +VF S+ T++
Sbjct: 238 LKACGCVGALDIGRTLHGKIR-ELGLDSDVVIATSLVDFYGKCGSMVDAEQVFSSIVTKD 296
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVE-LSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
+ WNAL++G+++ + F ++S ++PD TF CV+ AC G+ + G
Sbjct: 297 IVAWNALLTGYSRQGDTEALFQAFDRMMASRPRVRPDGVTFLCVLTACSHSGLVEQG-KR 355
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
M + GL + + L+ + G+ +EE V + + MP N+VSW +++
Sbjct: 356 YFEAMKSIHGLDPGMEHYHCLVDILGRSNRLEEAVAMVKEMPVVANIVSWTTVL 409
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 36/192 (18%)
Query: 104 LQACGHEKDIEIGKR---VHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
L+AC E K+ +H + + S++FI NT L+ Y+ CG DS+RVFD +
Sbjct: 64 LKACSSLAAREEAKKTMAIHSRAARAKHDSDNFIANT-LVDAYAKCGSLPDSQRVFDRIS 122
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ W AL+ G +++ L +F L + ++ TF
Sbjct: 123 RRDVVSWTALILGHAESDHPQVALELFSGLE---DCYVNSLTF----------------- 162
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
D+FV+N+L+ MY KC + + ++F+ M ++VSWNS+I G+++N
Sbjct: 163 ------------WDLFVANSLVDMYAKCGSMVDSRRVFDGMRRHDVVSWNSLISGYADND 210
Query: 281 FSCESFDLLIKM 292
+ +L + M
Sbjct: 211 QGEAALELFVPM 222
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 79/157 (50%), Gaps = 5/157 (3%)
Query: 142 MYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF 201
MY CG D+R++FD ++ ++ +LV G+ +N + L +F + E P+
Sbjct: 1 MYGKCGSMADARKIFDRMQRPDVVSLTSLVLGYAENGEAQEALRLFQLMKGGCE--PNAR 58
Query: 202 TFPCVIKACGGIA---DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
TF +KAC +A + +H AA+ D F++N L+ Y KC + + ++F
Sbjct: 59 TFVAGLKACSSLAAREEAKKTMAIHSRAARAKHDSDNFIANTLVDAYAKCGSLPDSQRVF 118
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+ + R++VSW ++I G +E+ + +L + C
Sbjct: 119 DRISRRDVVSWTALILGHAESDHPQVALELFSGLEDC 155
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 108/210 (51%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +CG + + + +H V F D ++ T L+TMY CG +S VF+++ R
Sbjct: 243 ILSSCGDHSSLPLARSIHARVE-ELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVR 301
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
N WNA+++ F + + +I+ + + +P+ TF +KA D+G +
Sbjct: 302 NHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEG-FRPNKITFVTALKAACSSSSQDLGESA 360
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG A GL GDV V AL+ MYG ++ F+ +P +N+VSWN+++ + +NG
Sbjct: 361 ALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNG 420
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ +L M + P+ ++ + VL
Sbjct: 421 RAREAMELFAAMK--RQSLAPNKVSYLAVL 448
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 3/192 (1%)
Query: 119 VHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNE 178
VH+ + S D + T L+ Y CG + VF ++ +L WNA + N+
Sbjct: 157 VHDDIRGS-DLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGND 215
Query: 179 LYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVS 238
D + V L P+ +F ++ +CG + + +H ++G +GDV V+
Sbjct: 216 ERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVA 275
Query: 239 NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEG 298
AL+ MYG+C V+E + +FE M RN VSWN++I F++ G +F + +M +EG
Sbjct: 276 TALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQ--QEG 333
Query: 299 FIPDVITVVTVL 310
F P+ IT VT L
Sbjct: 334 FRPNKITFVTAL 345
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 102/204 (50%), Gaps = 6/204 (2%)
Query: 111 KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNAL 170
+D+ + +H V + F+ + I ++ M++ G ++ FD+ ++ WN
Sbjct: 452 EDVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTK 511
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV-HGMAAKM 229
V+ + E ++ F + + +PD FT V+ C + + G + ++A +
Sbjct: 512 VAALSAREDLHGAITAFYTMQHEG-FRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAI 570
Query: 230 GLIGDVFVSNALIAMYGKC-AFVEEMVKLFEVMPE--RNLVSWNSIICGFSENGFSCESF 286
+ DV V++A++ M KC + V+E +LF MP+ ++LV+WN++I ++++G ++
Sbjct: 571 EVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKAL 630
Query: 287 DLLIKMMGCEEGFIPDVITVVTVL 310
L ++M PD T V+VL
Sbjct: 631 KLF-RIMQQRSSVRPDSSTFVSVL 653
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 7/187 (3%)
Query: 125 ASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVL 184
A D ++ T L+TMY G +R FD++ +N+ WNA+++ + N + +
Sbjct: 367 ACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAM 426
Query: 185 SIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG-DVFVSNALIA 243
+F + + L P+ ++ V+ C DV +H GL + ++N ++
Sbjct: 427 ELFAAMKRQS-LAPNKVSYLAVLGCC---EDVSEARSIHAEVVGNGLFAQESSIANGVVR 482
Query: 244 MYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
M+ + +EE V F+ ++ VSWN+ + S + M EGF PD
Sbjct: 483 MFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQ--HEGFRPDK 540
Query: 304 ITVVTVL 310
T+V+V+
Sbjct: 541 FTLVSVV 547
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 19/226 (8%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
E LL+ C + D+ G+++H + ND + N L+ MYS C D+ F
Sbjct: 25 ETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNY-LVQMYSKCRSLDDANAAFS 83
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA--- 214
+L++R + WN L++ + D L ++L E +P+ T +I G IA
Sbjct: 84 ALRSRGIATWNTLIAAQSSPAAVFD-LYTRMKLEERAENRPNKLT---IIAVLGAIASGD 139
Query: 215 ----------DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
+ VH L D+FV+ AL+ YGKC VE +++F +
Sbjct: 140 PSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVP 199
Query: 265 NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+L+ WN+ I + N + LL++ M EG +P+ + V +L
Sbjct: 200 DLICWNAAIMACAGNDERPDRALLLVRRMWL-EGLLPNRASFVAIL 244
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 85/188 (45%), Gaps = 14/188 (7%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDS-RRVFDSL-- 159
++ C +E+G+ + + +SA+ + D ++ + ++ M + CG +D R+F +
Sbjct: 546 VVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPD 605
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVG 217
++L WN +++ + ++ L +F + + ++PD+ TF V+ C G+ +
Sbjct: 606 DRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVE-- 663
Query: 218 FGSGVHGMAAKMGLIG----DVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSI 272
G+H ++G V L+ + G+ ++ E MP + V W S+
Sbjct: 664 --DGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSL 721
Query: 273 ICGFSENG 280
+ S G
Sbjct: 722 LGACSSYG 729
>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
Length = 1008
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 110/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ C K ++IGK +H V S FS+D + LI+MY+ G +R +FDS +
Sbjct: 262 IIPLCTRMKCLDIGKSIHGFVVKSG-FSSDEFLTPALISMYAGGGNLFIARDLFDSAAEK 320
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN+++S + +N+ ++ +F ++ ++P+ TF +I C A+ +G +
Sbjct: 321 NVVIWNSMISAYAQNQKSSEAFKMFQQMLK-ANMQPNVVTFVSIIPCCENSANFWYGKSL 379
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K L + V+ AL++MY K + +F MP RNL+SWNS+I G+ NG
Sbjct: 380 HAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLW 439
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
S D M EGF PD I++V +L
Sbjct: 440 EASMDAFCDMQF--EGFDPDAISIVNIL 465
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC + I + VH +V T F + +I T L+ Y+ G + +R V D +
Sbjct: 161 VIKACTALGAVWIAEGVHCIV-LRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQP 219
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WNAL+SG++ N +V + +++ + LKP+ TF +I C + + G +
Sbjct: 220 DLVTWNALISGYSLNGFDKEVFEVLRQIN-EMGLKPNVSTFASIIPLCTRMKCLDIGKSI 278
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K G D F++ ALI+MY + LF+ E+N+V WNS+I +++N S
Sbjct: 279 HGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKS 338
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+F + +M+ + P+V+T V+++P
Sbjct: 339 SEAFKMFQQML--KANMQPNVVTFVSIIP 365
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + I +GK H S +F ++ I+ L+ YS CG S ++F + R
Sbjct: 464 ILSACSKLEAILLGKAAHAF-SFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLR 522
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WN L+SG N +++ ++ + +++ D T +I C ++ G +
Sbjct: 523 NAISWNTLISGCVHNGDTKKAVALLHKMQQE-KMELDLVTLISIIPICRVAENLIQGMTL 581
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A K G DV + NALI+MY C + LFEVMP R++VSWN++I G+ +
Sbjct: 582 HGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQ 641
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E +M+ EG P+ +T++ +LP
Sbjct: 642 NEVMASFCQMI--REGQKPNYVTLLNLLP 668
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 106/209 (50%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ C + + GK +H V + + + T L++MY+ G + +F + R
Sbjct: 363 IIPCCENSANFWYGKSLHAHV-MKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRR 421
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL WN+++SG+ N L+ + F ++ + PD + ++ AC + + G
Sbjct: 422 NLLSWNSMISGYGHNGLWEASMDAFCDMQFEG-FDPDAISIVNILSACSKLEAILLGKAA 480
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + + ++ +SNAL+A Y C + KLF+ MP RN +SWN++I G NG +
Sbjct: 481 HAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDT 540
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ LL KM +E D++T+++++P
Sbjct: 541 KKAVALLHKMQ--QEKMELDLVTLISIIP 567
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 106/201 (52%), Gaps = 4/201 (1%)
Query: 111 KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNAL 170
++IE K + ++ +++++ +I+ + L G P + F++++ ++F N +
Sbjct: 68 RNIENLKPLGSVLIVRDLMRDEYVVAEFIISCFHL-GAPELALSAFEAIEKPSVFLQNLM 126
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
+ + L+ DVL ++++ D+FTFP VIKAC + V GVH + +
Sbjct: 127 IRRLCDHGLFEDVLCVYLKCRV-LGCPSDDFTFPFVIKACTALGAVWIAEGVHCIVLRTS 185
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
++ + AL+ Y K + + + + + + +LV+WN++I G+S NGF E F++L
Sbjct: 186 FEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLR 245
Query: 291 KMMGCEEGFIPDVITVVTVLP 311
++ E G P+V T +++P
Sbjct: 246 QIN--EMGLKPNVSTFASIIP 264
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 4/195 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK +H + II T LI+MY+ +F+ ++ WNA++S +
Sbjct: 676 GKSIHAFAVRTGVIVETPII-TSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYV 734
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+ + + ++ F EL ++PD TF +I AC ++ + + V + G +
Sbjct: 735 QTKNAKESVTFFCELL-HARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHI 793
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+SNALI ++ +C + K+FE + ++ VSW+++I G+ +G S + LL +M
Sbjct: 794 VISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMR-- 851
Query: 296 EEGFIPDVITVVTVL 310
G PD IT +VL
Sbjct: 852 LSGMKPDGITYASVL 866
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ AC + + V V F +I+ LI +++ CG ++++F+ L ++
Sbjct: 764 LISACVQLSSLNLSNSVMAYV-IQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSK 822
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGF 218
+ W+ +++G+ + L++ ++ + +KPD T+ V+ AC GG D G+
Sbjct: 823 DAVSWSTMINGYGLHGDSEAALALLSQMRL-SGMKPDGITYASVLSACSHGGFIDQGW 879
>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
Length = 706
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 129/247 (52%), Gaps = 10/247 (4%)
Query: 68 QEITTLCEESKSLNK---ALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVS 124
+ ++TL + + L + A+ LQ+ +ADLKE V+ Q+C + G+R+H+L+
Sbjct: 4 RRLSTLLSKRQQLGQIAAAIDALQKR-KDADLKECVRVI-QSCARLGALAEGRRIHQLIR 61
Query: 125 ASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVL 184
+D ++ L+ MY CG ++R VF++ +N+F W L++ ++ + L
Sbjct: 62 -RVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEAL 120
Query: 185 SIFVELSSDTELKPDNFTFPCVIKAC-GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIA 243
++F E+ ++P + +F I AC G + G +H + + G V + +L++
Sbjct: 121 ALFYEMLKQG-IQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVS 179
Query: 244 MYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
MY KC +EE VK FE M E N VSWN++I F+E+ E+ L KM EG
Sbjct: 180 MYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEALRTLQKMF--LEGIRACS 237
Query: 304 ITVVTVL 310
+T +T++
Sbjct: 238 VTYITLM 244
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 139/283 (49%), Gaps = 27/283 (9%)
Query: 39 SLRSIFKEKSSLSLSAKTNNASTQ--GLHFLQEITTLCEESKSLNKALSLLQ----ENLH 92
SL S++ + SL S KT + T+ + + I E + L +AL LQ E +
Sbjct: 176 SLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGL-EALRTLQKMFLEGIR 234
Query: 93 NADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDS 152
+ T L+ A ++ + +H+ + T F D ++N ++ MY CG D+
Sbjct: 235 ACSVTYIT--LMSAYDQPSQLKSARYIHDCI-LRTGFDQD-VVNV-ILNMYGKCGCLQDA 289
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
+F S+ ++ WN +++ ++++ ++ L F EL + + PD++T+ VI AC
Sbjct: 290 EAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALR-FYELMQEEGVVPDDYTYVSVIDACAT 348
Query: 213 IADVGFGSGVHGMAAKMGLIGD-----VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLV 267
+ D+ G VH +GD ++N+L+ MYGKC ++ +F+ + V
Sbjct: 349 LGDMEVGKQVHRR------LGDRAFQVTELANSLVNMYGKCGILDVARSIFD-KTAKGSV 401
Query: 268 SWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+WN++I ++++ ++F+L + M +G P IT ++VL
Sbjct: 402 TWNAMIGAYAQHSHEQQAFELFLLMR--LDGEEPSYITFMSVL 442
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 119/244 (48%), Gaps = 9/244 (3%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADLKEATG--VLLQACGHEKD-IEIGKRVHELVSAS 126
+ T+C + +AL+L E L + + AC + + G+ +H L+
Sbjct: 106 LITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLR-R 164
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
F + + T L++MYS CG +S + F+S+ N WNA+++ F ++ + L
Sbjct: 165 YGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEALRT 224
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
++ + ++ + T+ ++ A + + +H + G DV N ++ MYG
Sbjct: 225 LQKMFLEG-IRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQDVV--NVILNMYG 281
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
KC +++ +F+ M + ++++WN++I +S++G + E+ M EEG +PD T
Sbjct: 282 KCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQ--EEGVVPDDYTY 339
Query: 307 VTVL 310
V+V+
Sbjct: 340 VSVI 343
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 112/210 (53%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L E ++ +G++ H +T S + + L+ MY+ C D+ R+F +L
Sbjct: 349 ATMLSVAAIELNLSMGRQTHAQAVVTTAVS-EVQVGNALVDMYAKCEKFEDANRIFANLA 407
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN W A++S + + + + L +F E++ + + D TF +KA +A V G
Sbjct: 408 YRNSVPWTAIISIYVQKGFHEEALKMFKEMNREN-VHGDQATFASTLKASANLASVSLGK 466
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H ++GL+ VF + L+ MY C +++ +++F+ MP+RN+V WN++I +S+NG
Sbjct: 467 QLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNG 526
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +F M+ E G PD ++ ++VL
Sbjct: 527 DAEATFSSFADMI--ESGLYPDSVSFLSVL 554
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 94/167 (56%), Gaps = 3/167 (1%)
Query: 129 FSNDFIINTRLITMY-SLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
FS I+ L+ Y C + S+ +F + T++ +N +++G+TK + L +F
Sbjct: 174 FSASLIVFNSLVDSYCKTCCLDIASQ-LFSEMPTKDSVSFNVMITGYTKYGFREEALKLF 232
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+++ + + +P FTF ++ G DV FG +HG+A K + D+FV+NAL+ Y K
Sbjct: 233 MQMR-NMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSK 291
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
+++ LF+ MPE + VS+N II G++ NG +SFDL ++ G
Sbjct: 292 HDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQG 338
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 8/215 (3%)
Query: 82 KALSLLQENLHNADLKEA----TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
+AL L + + N D + + +L + G E D+ G+++H L + T + D +
Sbjct: 227 EALKLFMQ-MRNMDFQPSGFTFAAMLGMSVGSE-DVIFGQQIHGL-AIKTSYVWDIFVAN 283
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L+ YS + ++ +FD + + +N +++G+ N Y +F L T
Sbjct: 284 ALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQG-TSFD 342
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
NF F ++ ++ G H A + +V V NAL+ MY KC E+ ++
Sbjct: 343 RKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRI 402
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
F + RN V W +II + + GF E+ + +M
Sbjct: 403 FANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEM 437
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 80/159 (50%), Gaps = 3/159 (1%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+R +F+S+ +RN W ++ G+++N + +++ E+ + +KPD+ TF ++
Sbjct: 96 ARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCR-SGVKPDHITFATLLSGFD 154
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
+ +H + G + V N+L+ Y K ++ +LF MP ++ VS+N
Sbjct: 155 DTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNV 214
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+I G+++ GF E+ L ++M + F P T +L
Sbjct: 215 MITGYTKYGFREEALKLFMQMRNMD--FQPSGFTFAAML 251
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 239 NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEG 298
N +++ Y K + +LFE M RN VSW +I G+S+N E+F+L +M C G
Sbjct: 81 NMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEM--CRSG 138
Query: 299 FIPDVITVVTVL 310
PD IT T+L
Sbjct: 139 VKPDHITFATLL 150
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 122/239 (51%), Gaps = 8/239 (3%)
Query: 76 ESKSLNKALSLLQENLH-NADLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
E+ +AL L +E + N E+T V +L AC H IE+G++VH V SN
Sbjct: 173 ETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLK 232
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
I+N LI +YS CG + +F L +++ WN L+ G+T LY + L +F E+
Sbjct: 233 IVNA-LIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 291
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM--GLIGDVFVSNALIAMYGKCAFV 251
E P++ T V+ AC + + G +H K G+ + +LI MY KC +
Sbjct: 292 GE-TPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDI 350
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E ++F M ++L SWN++I GF+ +G + SFDL +M G PD IT V +L
Sbjct: 351 EAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKI--GIEPDDITFVGLL 407
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 97/181 (53%), Gaps = 3/181 (1%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
D + T LIT Y+ G ++++FD + +++ WNA++SG+ + Y + L +F E+
Sbjct: 128 RDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEM 187
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
++PD T+ V+ AC + G VH G ++ + NALI +Y KC
Sbjct: 188 MK-MNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGE 246
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
VE LF+ + ++++SWN++I G++ E+ L +M+ G P+ +T+++VL
Sbjct: 247 VETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEML--RSGETPNDVTMLSVL 304
Query: 311 P 311
P
Sbjct: 305 P 305
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 35/195 (17%)
Query: 147 GFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCV 206
G P + VF++++ N WN ++ G + L+++V + S L P+++TFP +
Sbjct: 13 GLPY-ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVS-LGLLPNSYTFPFL 70
Query: 207 IKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV----------- 255
+K+C G +HG K+G D++V +LI+MY + +E+
Sbjct: 71 LKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDV 130
Query: 256 --------------------KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
KLF+ +P +++VSWN++I G++E G E+ +L +MM
Sbjct: 131 VSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMM-- 188
Query: 296 EEGFIPDVITVVTVL 310
+ PD T VTVL
Sbjct: 189 KMNVRPDESTYVTVL 203
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 108/210 (51%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +CG + + + +H V F D ++ T L+TMY CG +S VF+++ R
Sbjct: 239 ILSSCGDHSSLPLARSIHARVE-ELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVR 297
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
N WNA+++ F + + +I+ + + +P+ TF +KA D+G +
Sbjct: 298 NHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEG-FRPNKITFVTALKAACSSSSQDLGESA 356
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG A GL GDV V AL+ MYG ++ F+ +P +N+VSWN+++ + +NG
Sbjct: 357 ALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNG 416
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ +L M + P+ ++ + VL
Sbjct: 417 RAREAMELFAAMK--RQSLAPNKVSYLAVL 444
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 3/192 (1%)
Query: 119 VHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNE 178
VH+ + S D + T L+ Y CG + VF ++ +L WNA + N+
Sbjct: 153 VHDDIRGS-DLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGND 211
Query: 179 LYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVS 238
D + V L P+ +F ++ +CG + + +H ++G +GDV V+
Sbjct: 212 ERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVA 271
Query: 239 NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEG 298
AL+ MYG+C V+E + +FE M RN VSWN++I F++ G +F + +M +EG
Sbjct: 272 TALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQ--QEG 329
Query: 299 FIPDVITVVTVL 310
F P+ IT VT L
Sbjct: 330 FRPNKITFVTAL 341
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 101/204 (49%), Gaps = 6/204 (2%)
Query: 111 KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNAL 170
+D+ + +H V + F+ + I ++ M++ G ++ FD+ ++ WN
Sbjct: 448 EDVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTK 507
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV-HGMAAKM 229
V+ + E ++ F + + +PD FT V+ C + + G + ++A +
Sbjct: 508 VAALSAREDLHGAITAFYTMQHEG-FRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAI 566
Query: 230 GLIGDVFVSNALIAMYGKC-AFVEEMVKLFEVMPE--RNLVSWNSIICGFSENGFSCESF 286
+ DV V +A++ M KC + V+E +LF MP+ ++LV+WN++I ++++G ++
Sbjct: 567 EVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKAL 626
Query: 287 DLLIKMMGCEEGFIPDVITVVTVL 310
L ++M PD T V+VL
Sbjct: 627 KLF-RIMQQRSSVRPDSSTFVSVL 649
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 15/222 (6%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
E LL+ C + D+ G+++H + ND + N L+ MYS C D+ F
Sbjct: 25 ETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNY-LVQMYSKCRSLDDANAAFS 83
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD-- 215
+L++R + WN L++ + D L ++L E +P+ T +I G IA
Sbjct: 84 ALRSRGIATWNTLIAAQSSPAAVFD-LYTRMKLEERAENRPNRLT---IIAVLGAIASGD 139
Query: 216 -------VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS 268
VH L D+FV+ AL+ YGKC VE +++F + +L+
Sbjct: 140 PSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLIC 199
Query: 269 WNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
WN+ I + N + LL++ M EG +P+ + V +L
Sbjct: 200 WNAAIMACAGNDERPDRALLLVRRMWL-EGLLPNRASFVAIL 240
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 85/188 (45%), Gaps = 14/188 (7%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDS-RRVFDSL-- 159
++ C +E+G+ + + +SA+ + D ++ + ++ M + CG +D R+F +
Sbjct: 542 VVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPD 601
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVG 217
++L WN +++ + ++ L +F + + ++PD+ TF V+ C G+ +
Sbjct: 602 DRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVE-- 659
Query: 218 FGSGVHGMAAKMGLIG----DVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSI 272
G+H ++G V L+ + G+ ++ E MP + V W S+
Sbjct: 660 --DGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSL 717
Query: 273 ICGFSENG 280
+ S G
Sbjct: 718 LGACSSYG 725
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 109/198 (55%), Gaps = 4/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E+ K++H L+ S D + LI +YS C + D+R VF+ + +++ WNA+
Sbjct: 356 LELSKQIHGLI-IKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFF 414
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G+T++ + L ++ L + KP+ FTF +I A +A + G H KMGL
Sbjct: 415 GYTQHLENEEALKLYSTLQFSRQ-KPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLD 473
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
FV+NAL+ MY KC +EE K+F R++V WNS+I +++G + E+ + +M
Sbjct: 474 FCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREM 533
Query: 293 MGCEEGFIPDVITVVTVL 310
M +EG P+ +T V VL
Sbjct: 534 M--KEGIQPNYVTFVAVL 549
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 108/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + +E GK++H V + ++N LI Y+ C R++FD + +
Sbjct: 144 VLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNV-LIDFYTKCNRVKAGRKLFDQMVVK 202
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W ++SG+ +N + + +F E++ KPD F V+ +CG + + G V
Sbjct: 203 NIISWTTMISGYMQNSFDWEAMKLFGEMNR-LGWKPDGFACTSVLTSCGSLEALEQGRQV 261
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K L + FV N LI MY K + + K+F+VM E+N++S+N++I G+S
Sbjct: 262 HAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKL 321
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L +M F P ++T V++L
Sbjct: 322 SEALELFHEMR--VRLFPPSLLTFVSLL 347
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +CG + +E G++VH + SN+F+ N LI MY+ D+++VFD + +
Sbjct: 245 VLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNG-LIDMYAKSNLLXDAKKVFDVMAEQ 303
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ +NA++ G++ E ++ L +F E+ P TF ++ + + +
Sbjct: 304 NVISYNAMIEGYSSQEKLSEALELFHEMRVRL-FPPSLLTFVSLLGVSASLFALELSKQI 362
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
HG+ K G+ D+F +ALI +Y KC++V++ +FE M E+++V WN++ G++++
Sbjct: 363 HGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQH 419
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC +E G ++H V S F D + T LI YS G +R VFD L +
Sbjct: 43 VIRACTQLGVVEKGAQLHGFVVRSG-FDQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEK 101
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
W +++G+TK L +F ++ +T + PD + V+ AC + + G +
Sbjct: 102 TAVTWTTIIAGYTKCGRSXVSLELFAQMR-ETNVVPDRYVVSSVLSACSMLEFLEGGKQI 160
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G DV V N LI Y KC V+ KLF+ M +N++SW ++I G+ +N F
Sbjct: 161 HAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFD 220
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M G+ PD +VL
Sbjct: 221 WEAMKLFGEMNRL--GWKPDGFACTSVL 246
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 176 KNELYTD-VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
++E Y++ L +FV+L + P+ F VI+AC + V G+ +HG + G D
Sbjct: 12 EDEGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQD 71
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
V+V +LI Y K +E +F+ + E+ V+W +II G+++ G S S +L +M
Sbjct: 72 VYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMR- 130
Query: 295 CEEGFIPDVITVVTVL 310
E +PD V +VL
Sbjct: 131 -ETNVVPDRYVVSSVL 145
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 99/176 (56%), Gaps = 3/176 (1%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
++T L T+YS +R++FD ++L WNA++SG+T+N L D +S+F E+ +
Sbjct: 356 VSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQK-S 414
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
E P+ T C++ AC + + G VH + ++VS ALI MY KC + E
Sbjct: 415 EFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEA 474
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+LF++M ++N V+WN++I G+ +G E+ ++ +M+ G P +T + VL
Sbjct: 475 RRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN--SGITPTPVTFLCVL 528
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 1/183 (0%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F ND + T+L S G +R +F S++ ++F +N L+ GF+ NE LS+F
Sbjct: 48 FRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFA 107
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
L T+LKP++ T+ I A G D G +HG A G ++ + + ++ MY K
Sbjct: 108 HLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKF 167
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
VE+ K+F+ MPE++ + WN++I G+ +N ES + ++ E D T++
Sbjct: 168 WRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLIN-ESCTRLDTTTLLD 226
Query: 309 VLP 311
+LP
Sbjct: 227 ILP 229
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 89/163 (54%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
++ ++ + ++ MY D+R+VFD + ++ WN ++SG+ KNE+Y + + +F +L
Sbjct: 152 SELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL 211
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
+++ + D T ++ A + ++ G +H +A K G +V I++Y KC
Sbjct: 212 INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
++ LF + ++V++N++I G++ NG + S L ++M
Sbjct: 272 IKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELM 314
>gi|39546235|emb|CAE04244.3| OSJNBa0089N06.5 [Oryza sativa Japonica Group]
gi|125549842|gb|EAY95664.1| hypothetical protein OsI_17530 [Oryza sativa Indica Group]
gi|215686910|dbj|BAG90780.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 559
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ C GK VH V+A++ D ++T+L+ Y+ G +R+VFD + R
Sbjct: 17 LLQCCISSCAFRQGKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVAAARKVFDGMPHR 76
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W A+VSG+ +N + L +F L + +P+ FT+ AC G G V
Sbjct: 77 SVVSWTAMVSGYARNGRPREALELFA-LMRASGARPNQFTYGSAASACAGAGCARSGEQV 135
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H AAK GD+FV +AL+ M+ +C VE+ +LF M ++++VSWN++I GF E G
Sbjct: 136 HACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVVSWNALIRGFVERGHD 195
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L M+ +E IPD T+ + L
Sbjct: 196 GDALGLFSSML--KEAMIPDHYTLGSAL 221
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 117/251 (46%), Gaps = 26/251 (10%)
Query: 79 SLNKALSLLQENLHNAD--------LKEAT-------GVLLQACG---HEKDIEIGKRVH 120
S N + E H+ D LKEA G L+ACG ++E+ +H
Sbjct: 181 SWNALIRGFVERGHDGDALGLFSSMLKEAMIPDHYTLGSALKACGIVGVAVNVEL---IH 237
Query: 121 ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELY 180
+ + +I + LI Y+ C +R ++DS+ +L AL+SG+T + Y
Sbjct: 238 SCIIKLGYWDEKVVIGS-LINSYAKCRSMSSARVIYDSISEPDLVSSTALISGYTMDRNY 296
Query: 181 T-DVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSN 239
+ D + +F ++ L D V+ C +A FG+ +H K +GD+ + N
Sbjct: 297 SEDAMELFCKIHRKG-LWIDGVLLSSVLCLCASVASARFGTQIHAYMCKKQPMGDIALDN 355
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
AL+ MY K + + F+ MP RN++SW S+I NG ++ L +M+ E+G
Sbjct: 356 ALVDMYAKAGEFSDAKRAFDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMV--EDGV 413
Query: 300 IPDVITVVTVL 310
P+ +T +++L
Sbjct: 414 RPNDVTFLSLL 424
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 114/208 (54%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +C ++G+++H LV T F + + + L+ MY+ G ++RRVFD L R
Sbjct: 584 VLTSCTSSSGFQLGRQIHSLV-IKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPER 642
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ A++SG+ + L + L +F L + ++ + T+ V+ A G+A + G V
Sbjct: 643 DVVSCTAIISGYAQLGLDEEALDLFRRLQREG-MRSNYVTYASVLTALSGLAALDHGRQV 701
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + L V + N+LI MY KC + ++F+ MPER ++SWN+++ G+S++G
Sbjct: 702 HSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLG 761
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L K+M E PD +T + VL
Sbjct: 762 REAVELF-KLMKEENKVKPDSVTFLAVL 788
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 130/244 (53%), Gaps = 10/244 (4%)
Query: 69 EITTLCEESKSLNKALSLLQENLHNADLK-EATGVLLQACGHEKDIEIGKRVHELVSAST 127
++ TLC ++ L +AL L+ + +++ + +L C + I G+RVH + T
Sbjct: 451 DLKTLCS-NRQLKEAL--LEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHM-IKT 506
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
+ + TRLI +Y+ C D+RRV D + RN+ W A++SG+++ ++ L +F
Sbjct: 507 CYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLF 566
Query: 188 VE-LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
VE L S T P+ FTF V+ +C + G +H + K +FV ++L+ MY
Sbjct: 567 VEMLMSGT--APNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYA 624
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
K + E ++F+ +PER++VS +II G+++ G E+ DL ++ EG + +T
Sbjct: 625 KAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQ--REGMRSNYVTY 682
Query: 307 VTVL 310
+VL
Sbjct: 683 ASVL 686
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 86/165 (52%), Gaps = 6/165 (3%)
Query: 113 IEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
++ G++VH ++ A F ++ LI MYS CG SRR+FDS+ R + WNA++
Sbjct: 695 LDHGRQVHSHVLRAKLPFY--VVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAML 752
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKM 229
G++K+ L + + +F + + ++KPD+ TF V+ C GG+ D G + K
Sbjct: 753 VGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKD 812
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
G ++ ++ ++G+ VEE + + MP E W S++
Sbjct: 813 GFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLL 857
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 113/210 (53%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L + +++G++VH +T S + N+ L+ MY+ C ++ +F SL
Sbjct: 349 ATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNS-LVDMYAKCEMFDEAELIFKSLS 407
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R+ W AL+SG+ + L+ L +F ++ L+ D TF V+KA G A + G
Sbjct: 408 QRSTVSWTALISGYVQKGLHGAGLKLFTKMRG-ANLRADQSTFATVLKASAGFASLLLGK 466
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H + G + +VF + L+ MY KC +++ V++FE MP+RN VSWN++I +++NG
Sbjct: 467 QLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNG 526
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ KM+ + G PD ++++ VL
Sbjct: 527 DGEAAIGAFTKMI--QSGLQPDSVSILGVL 554
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 5/211 (2%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
+GVL G D +G+++H L S +T FS D + +++ YS L++R +F+ +
Sbjct: 248 SGVLKAVVGLH-DFALGQQLHGL-SVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEM 305
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+ +N ++S +++ E Y + L++F E+ NF F ++ ++ + G
Sbjct: 306 PELDFVSYNVVISSYSQAEQYEESLNLFREMQC-MGFDRRNFPFATMLSIAANLSSLQVG 364
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
VH A + V N+L+ MY KC +E +F+ + +R+ VSW ++I G+ +
Sbjct: 365 RQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQK 424
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G L KM G D T TVL
Sbjct: 425 GLHGAGLKLFTKMRGAN--LRADQSTFATVL 453
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
+F+ + ++ +N L++G+ K+ LYT+ + +F+++ KP +FTF V+KA G+
Sbjct: 200 LFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGH-KPSDFTFSGVLKAVVGLH 258
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
D G +HG++ G D V N ++ Y K V E LF MPE + VS+N +I
Sbjct: 259 DFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVIS 318
Query: 275 GFSENGFSCESFDLLIKM--MGCEEGFIP 301
+S+ ES +L +M MG + P
Sbjct: 319 SYSQAEQYEESLNLFREMQCMGFDRRNFP 347
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 5/174 (2%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+I+ Y G +R +FD++ R + W L+ + N + + +F ++ L P
Sbjct: 81 MISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTL-P 139
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF--VSNALIAMYGKCAFVEEMVK 256
D TF ++ C VH A K+G ++F V N L+ Y + ++
Sbjct: 140 DYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACV 199
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
LFE + +++ V++N++I G+ ++G E+ L +KM + G P T VL
Sbjct: 200 LFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMR--QSGHKPSDFTFSGVL 251
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 238 SNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEE 297
+N +I+ Y K + LF+ MP+R +V+W ++ ++ N E+F L +M C
Sbjct: 78 TNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQM--CRS 135
Query: 298 GFIPDVITVVTVLP 311
+PD +T T+LP
Sbjct: 136 CTLPDYVTFTTLLP 149
>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 720
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 127/236 (53%), Gaps = 6/236 (2%)
Query: 75 EESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFI 134
E+++++ S+L E + + A+ +L +CG+ KDI GK +H L+ S F +
Sbjct: 229 EDTEAVKAFQSMLVEKVQPNEYTYAS--VLISCGNLKDIGNGKLIHGLMVKSG-FESALA 285
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
T L+TMY C DS VF +K N W +L+SG +N L F ++ D+
Sbjct: 286 SQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMRDS 345
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+KP++FT ++ C +A G VHG+ +K G D + + LI +YGKC +
Sbjct: 346 -VKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDMA 404
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ + E +++S N++I +++NGF E+ +L +M+ G P+ +TV++VL
Sbjct: 405 RLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINL--GLQPNDVTVLSVL 458
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 89/175 (50%), Gaps = 4/175 (2%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
++L+ CG +R++FD + R++ WN++++ + K+ + + ++ + S+ L
Sbjct: 85 SKLVDASLKCGEIGYARQLFDGMPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVL 144
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL-IGDVFVSNALIAMYGKCAFVEEMV 255
PD +T V KA ++ HG+A +GL + +VFV +AL+ MY K E
Sbjct: 145 -PDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAK 203
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + + E+++V ++I G+S+ G E+ M+ E P+ T +VL
Sbjct: 204 LVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSML--VEKVQPNEYTYASVL 256
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 6/172 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+ C + E G++VH +VS F D + LI +Y CG +R VFD+L +
Sbjct: 357 LRGCSNLAMFEEGRQVHGIVS-KYGFDRDKYAGSGLIELYGKCGCSDMARLVFDTLSEVD 415
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGSG 221
+ N ++ + +N + L +F E + L+P++ T V+ AC G+ + G
Sbjct: 416 VISLNTMIYSYAQNGFGREALELF-ERMINLGLQPNDVTVLSVLLACNNSGLVEEGCELF 474
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
K+ L D + ++ M G+ +EE L + +LV W +++
Sbjct: 475 DSFRKDKIMLTNDHYA--CMVDMLGRAGRLEEAEMLITEVTNPDLVLWRTLL 524
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKM-------GLIGDVFVSNALIAMYGKCAFVEEM 254
TF +++ C D SG+ + A+M L G V +L KC +
Sbjct: 49 TFSQLLRQC---IDERSISGIKNIQAQMLKSGFPVELSGSKLVDASL-----KCGEIGYA 100
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
+LF+ MPER++V+WNSII + ++ S E+ ++ M+ +PD T+ +V
Sbjct: 101 RQLFDGMPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMIS--NNVLPDEYTLSSV 153
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 127/238 (53%), Gaps = 8/238 (3%)
Query: 76 ESKSLNKALSLLQENLHNADLK--EATGV-LLQACGHEKDIEIGKRVHELVSASTQFSND 132
+S +KAL L ++H + ++ E T V ++ AC GK+VH+ + F +
Sbjct: 287 QSGDSDKALKLFS-SMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYL-LKLGFESQ 344
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
+ T L+ MY+ C +D+R+ FD L+ ++ W +++ G+ +N D LS++ +
Sbjct: 345 IYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEM 404
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ L P+ T V+KAC +A + G +H K G +V + +AL MY KC ++
Sbjct: 405 EGIL-PNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLK 463
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +F MP R+++SWN++I G S+NG E+ +L +M EG PD +T V +L
Sbjct: 464 DGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQ--LEGTKPDYVTFVNIL 519
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 3/195 (1%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G R+ V+ D + + L+ MY G ++R+VFD++ RN W ++SG+
Sbjct: 126 GGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYA 185
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+L + L +F L E + F F V+ A V G +H +A K GL+ V
Sbjct: 186 SQKLAAEALGLF-RLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIV 244
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
V NAL+ MY KC +++ ++ FE ++N ++W+++I G++++G S ++ L M
Sbjct: 245 SVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMH-- 302
Query: 296 EEGFIPDVITVVTVL 310
G P T V V+
Sbjct: 303 LSGIRPSEFTFVGVI 317
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 101/192 (52%), Gaps = 5/192 (2%)
Query: 109 HEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWN 168
H + ++ GK +H + S+ S+ I L+ +Y+ C +++ VF+ ++ +++ WN
Sbjct: 18 HNRSLQKGKALHAQIIKSS--SSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWN 75
Query: 169 ALVSGFTKN--ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
+++G++++ + V+ +F + ++ P+ TF V A + D G H +A
Sbjct: 76 CIINGYSQHGPSGSSHVMELFQRMRAENT-APNAHTFAGVFTAASTLVDAAGGRLAHAVA 134
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
KM DVFV ++L+ MY K E K+F+ MPERN VSW ++I G++ + E+
Sbjct: 135 IKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEAL 194
Query: 287 DLLIKMMGCEEG 298
L M EEG
Sbjct: 195 GLFRLMRREEEG 206
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 4/119 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC +E GK++H + F + I + L TMY+ CG D VF + R
Sbjct: 417 VLKACSSLAALEQGKQIHAR-TVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPAR 475
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFG 219
++ WNA++SG ++N + L +F E+ + KPD TF ++ AC G+ + G+G
Sbjct: 476 DVISWNAMISGLSQNGCGKEALELFEEMQLEGT-KPDYVTFVNILSACSHMGLVERGWG 533
>gi|224125246|ref|XP_002319538.1| predicted protein [Populus trichocarpa]
gi|222857914|gb|EEE95461.1| predicted protein [Populus trichocarpa]
Length = 577
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 110/199 (55%), Gaps = 3/199 (1%)
Query: 96 LKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRR 154
L +AT +L AC + + K VH L + F + + LIT Y CGF +
Sbjct: 57 LDQATLTTILSACDRPELGFVNKMVHCL-AVLNGFQREISVGNALITSYFKCGFSSSGMQ 115
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VFD + RN+ W A++SG ++ELY D L +FVE+++ ++P++ T+ + AC G+
Sbjct: 116 VFDEMLERNVITWTAIISGLVQSELYRDSLRLFVEMTNGL-VEPNSLTYLSSLMACSGLQ 174
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+ G +HG K+GL D V +AL+ MY KC + + +++FE + + VS I+
Sbjct: 175 ALREGCQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILA 234
Query: 275 GFSENGFSCESFDLLIKMM 293
GF++NGF E+ +KM+
Sbjct: 235 GFAQNGFEEEAMQFFVKML 253
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 6/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + + G ++H V +DF + + L+ MYS CG D+ ++F+S +
Sbjct: 167 LMACSGLQALREGCQIHGRV-WKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLD 225
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVE-LSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+++GF +N + + FV+ L + TE+ D+ V+ G +G G +
Sbjct: 226 KVSMTIILAGFAQNGFEEEAMQFFVKMLEAGTEI--DSNMVSAVLGVFGADTSLGLGQQI 283
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + K + FV N LI MY KC +E+ K+F MP N VSWNS+I F+ +G
Sbjct: 284 HSLVIKRSFGSNPFVGNGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARHGDG 343
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L +M +G P +T +++L
Sbjct: 344 SRALQLYKEMR--LKGVEPTDVTFLSLL 369
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 2/152 (1%)
Query: 142 MYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF 201
MY+ G D+ ++FD + R+ WN ++SGF K+ + F ++ S + D
Sbjct: 1 MYAKNGVLTDAAKLFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQA 60
Query: 202 TFPCVIKACGGIADVGF-GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV 260
T ++ AC ++GF VH +A G ++ V NALI Y KC F +++F+
Sbjct: 61 TLTTILSACDR-PELGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQVFDE 119
Query: 261 MPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
M ERN+++W +II G ++ +S L ++M
Sbjct: 120 MLERNVITWTAIISGLVQSELYRDSLRLFVEM 151
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 87/183 (47%), Gaps = 18/183 (9%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L G + + +G+++H LV + SN F+ N LI MYS CG DS +VF +
Sbjct: 267 VLGVFGADTSLGLGQQIHSLVIKRSFGSNPFVGNG-LINMYSKCGDLEDSTKVFSRMPCM 325
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG--- 219
N WN++++ F ++ + L ++ E+ ++P + TF ++ AC + V G
Sbjct: 326 NSVSWNSMIAAFARHGDGSRALQLYKEMRLKG-VEPTDVTFLSLLHACSHVGLVEKGMEF 384
Query: 220 ----SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSII- 273
+ VH + +M V + M G+ + E E +P + +++ W +++
Sbjct: 385 LKSMTEVHKLTPRMEHYACV------VDMLGRAGLLNEAKTFIEGLPIKPDVLVWQALLG 438
Query: 274 -CG 275
CG
Sbjct: 439 ACG 441
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 110/195 (56%), Gaps = 4/195 (2%)
Query: 118 RVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKN 177
+VH L+ F +D N L+ +YS CG+ + R+F+ + +++ W ++ GF ++
Sbjct: 265 QVHSLI-IERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQS 323
Query: 178 ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG-DVF 236
+ + +F ++ +++P++FTF ++ AC G HG+ K GL+G DV
Sbjct: 324 GHMEEAMWLFYQMQLG-DIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVV 382
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM-MGC 295
V +A++ MY KC + + ++ F+ MPER++ SWN IICG+++NG ++ L +M +
Sbjct: 383 VGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLG 442
Query: 296 EEGFIPDVITVVTVL 310
G P+ +T V VL
Sbjct: 443 PSGIAPNEVTFVGVL 457
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 97/182 (53%), Gaps = 4/182 (2%)
Query: 112 DIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNAL 170
D+ G++VH ++V + D I T L+ MY+ G D+R+VFD + +R L WNA+
Sbjct: 158 DLGFGQQVHADIVKVCSDL--DAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAM 215
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
+S ++K + +F +L + + D +T+ V+ V VH + + G
Sbjct: 216 ISCYSKYGRGDKSIGLFRQLXREG-ISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERG 274
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
D F +NAL+ +Y KC +V +LFE +P++++VSW II GF ++G E+ L
Sbjct: 275 FCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFY 334
Query: 291 KM 292
+M
Sbjct: 335 QM 336
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 7/172 (4%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+++ Y G ++ ++FD R+ WN ++SG KN + L+ F+++ + ++P
Sbjct: 87 ILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSS-VRP 145
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
DNFT+ +I C D+GFG VH K+ D F+ L+ MY + + + K+F
Sbjct: 146 DNFTYAIIIPCC----DLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVF 201
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ MP R LV+WN++I +S+ G +S L ++ EG D T VL
Sbjct: 202 DGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLX--REGISADEYTYAIVL 251
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 6/178 (3%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G LL AC + G+ H LV D ++ + ++ MYS CG D+ R F +
Sbjct: 349 GGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMP 408
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVE--LSSDTELKPDNFTFPCVIKACG--GIADV 216
R++ WN ++ G+ +N L ++ E L + + P+ TF V+ AC G+
Sbjct: 409 ERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKE 468
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSII 273
G+ S M K + ++ + G+ ++E L +P + + V W +++
Sbjct: 469 GY-SYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALILALPIKPDNVMWGALL 525
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K GLI V+ N L+ Y + + KL MP+ ++VS+N+I+ G+ + G
Sbjct: 37 LHASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILSGYFKFGL 96
Query: 282 SCESFDLL 289
E+ L
Sbjct: 97 VSEAIKLF 104
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 114/203 (56%), Gaps = 7/203 (3%)
Query: 111 KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC-GFPLDSRRVFDSLKTRNLFQWNA 169
KD+ G++ H ++ S F + + + LI +YS C G ++ R+VF+ + +L WN
Sbjct: 257 KDLVGGRQFHGMMIKSG-FHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNT 315
Query: 170 LVSGFTKNE-LYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK 228
++SGF+ E L D L F E+ + +PD+ +F CV AC ++ G VH +A K
Sbjct: 316 MISGFSLYEDLSEDGLWCFREMQRNG-FRPDDCSFVCVTSACSNLSSPSLGKQVHALAIK 374
Query: 229 MGL-IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFD 287
+ V V+NAL+AMY KC V + ++F+ MPE N VS NS+I G++++G ES
Sbjct: 375 SDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLR 434
Query: 288 LLIKMMGCEEGFIPDVITVVTVL 310
L M+ E+ P+ IT + VL
Sbjct: 435 LFELML--EKDIAPNSITFIAVL 455
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 25/219 (11%)
Query: 103 LLQACGHEKDIEIGKRVH--ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
++ ACG D+ + +++H +V +++ +N ++ YS GF ++RRVF +
Sbjct: 147 VITACG--DDVGLVRQLHCFVVVCGHDCYAS---VNNAVLACYSRKGFLSEARRVFREMG 201
Query: 161 T---RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
R+ WNA++ ++ + + +F E+ LK D FT V+ A + D+
Sbjct: 202 EGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRG-LKVDMFTMASVLTAFTCVKDLV 260
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA-FVEEMVKLFEVMPERNLVSWNSIICGF 276
G HGM K G G+ V + LI +Y KCA + E K+FE + +LV WN++I GF
Sbjct: 261 GGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGF 320
Query: 277 ------SENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
SE+G C F + + GF PD + V V
Sbjct: 321 SLYEDLSEDGLWC--FREMQR-----NGFRPDDCSFVCV 352
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 104/242 (42%), Gaps = 40/242 (16%)
Query: 103 LLQACGHEKDIEIGKRVHELVSAS-------------------------------TQFSN 131
LL+AC ++D+ GK +H L S TQ+ N
Sbjct: 15 LLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLTQYPN 74
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
F NT LI Y+ +RRVFD + ++ +N L++ + L +F E+
Sbjct: 75 VFSYNT-LINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVR 133
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ L D FT VI ACG DVG +H G V+NA++A Y + F+
Sbjct: 134 -ELRLGLDGFTLSGVITACGD--DVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFL 190
Query: 252 EEMVKLFEVMPE---RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
E ++F M E R+ VSWN++I ++ E+ L +M+ G D+ T+ +
Sbjct: 191 SEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMV--RRGLKVDMFTMAS 248
Query: 309 VL 310
VL
Sbjct: 249 VL 250
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 87/177 (49%), Gaps = 3/177 (1%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC + +GK+VH L S N +N L+ MYS CG D+RRVFD++ N
Sbjct: 355 ACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTV 414
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
N++++G+ ++ + + L +F EL + ++ P++ TF V+ AC V G M
Sbjct: 415 SLNSMIAGYAQHGVEVESLRLF-ELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNM 473
Query: 226 AAKMGLI-GDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENG 280
+ I + + +I + G+ ++E ++ E MP + W +++ ++G
Sbjct: 474 MKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHG 530
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 120/241 (49%), Gaps = 39/241 (16%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCG-----------FP-- 149
LLQ+C E + +GK++H L+ S S+ FI N L+ +YS CG P
Sbjct: 58 LLQSCISENSLSLGKQLHSLIITSGCSSDKFISN-HLLNLYSKCGQLDTAITLFGVMPRK 116
Query: 150 ------------------LDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ +R++FD + RN+ WNA+V+G + E + L +F ++
Sbjct: 117 NIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMN 176
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ PD F V++ C G+ + G VHG K G ++ V ++L MY KC +
Sbjct: 177 -ELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSL 235
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL--LIKMMGCEEGFIPDVITVVTV 309
E +L MP +N+V+WN++I G ++NG+ E D ++KM GF PD IT V+V
Sbjct: 236 GEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKM----AGFRPDKITFVSV 291
Query: 310 L 310
+
Sbjct: 292 I 292
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 98/194 (50%), Gaps = 2/194 (1%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A G +L+ C + + G++VH V F + ++ + L MY CG + R+ +
Sbjct: 186 ALGSVLRGCAGLRALVAGRQVHGYVR-KCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRA 244
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ ++N+ WN L++G +N +VL + + +PD TF VI +C +A +G
Sbjct: 245 MPSQNVVAWNTLIAGRAQNGYPEEVLDQY-NMMKMAGFRPDKITFVSVISSCSELATLGQ 303
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G +H K G V V ++LI+MY +C +E +K+F ++V W+S+I +
Sbjct: 304 GQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGF 363
Query: 279 NGFSCESFDLLIKM 292
+G E+ DL +M
Sbjct: 364 HGRGVEAIDLFNQM 377
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 35/155 (22%)
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
F SS +P F+ ++++C + G +H + G D F+SN L+ +Y
Sbjct: 41 FDRFSSHIWSEPSLFSH--LLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYS 98
Query: 247 KCAFVEEMV-------------------------------KLFEVMPERNLVSWNSIICG 275
KC ++ + K+F+ MPERN+ +WN+++ G
Sbjct: 99 KCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAG 158
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ F+ E L +M E GF+PD + +VL
Sbjct: 159 LIQFEFNEEGLGLFSRMN--ELGFLPDEFALGSVL 191
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 86/175 (49%), Gaps = 8/175 (4%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++ +C + G+++H E++ A I + LI+MYS CG S +VF +
Sbjct: 291 VISSCSELATLGQGQQIHAEVIKAGASLIVSVI--SSLISMYSRCGCLEYSLKVFLECEN 348
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFG 219
++ W+++++ + + + + +F ++ + +L+ ++ TF ++ AC G+ + G
Sbjct: 349 GDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQE-KLEANDVTFLSLLYACSHCGLKEKGI- 406
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSII 273
M K G+ + ++ + G+ VEE L MP + ++++W +++
Sbjct: 407 KFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLL 461
>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
Length = 654
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 127/238 (53%), Gaps = 8/238 (3%)
Query: 76 ESKSLNKALSLLQENLHNADLK--EATGV-LLQACGHEKDIEIGKRVHELVSASTQFSND 132
+S +KAL L ++H + ++ E T V ++ AC GK+VH+ + F +
Sbjct: 287 QSGDSDKALKLFS-SMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYL-LKLGFESQ 344
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
+ T L+ MY+ C +D+R+ FD L+ ++ W +++ G+ +N D LS++ +
Sbjct: 345 IYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEM 404
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ L P+ T V+KAC +A + G +H K G +V + +AL MY KC ++
Sbjct: 405 EGIL-PNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLK 463
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +F MP R+++SWN++I G S+NG E+ +L +M EG PD +T V +L
Sbjct: 464 DGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQ--LEGTKPDYVTFVNIL 519
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 101/192 (52%), Gaps = 5/192 (2%)
Query: 109 HEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWN 168
H + ++ GK +H + S+ S+ I L+ +Y+ C +++ VF+ ++ +++ WN
Sbjct: 18 HNRSLQKGKALHAQIIKSS--SSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWN 75
Query: 169 ALVSGFTKN--ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
+++G++++ + V+ +F + ++ P+ TF V A + D G H +A
Sbjct: 76 CIINGYSQHGPSGSSHVMELFQRMRAENT-APNAHTFAGVFTAASTLVDAAGGRLAHAVA 134
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
KM DVFV ++L+ MY K E K+F+ MPERN VSW ++I G++ + E+
Sbjct: 135 IKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEAL 194
Query: 287 DLLIKMMGCEEG 298
L M EEG
Sbjct: 195 GLFRLMRREEEG 206
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 3/195 (1%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G R+ V+ D + + L+ MY G ++R+VFD++ RN W ++SG+
Sbjct: 126 GGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYA 185
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+L + L +F L E + F F V+ A V G +H +A K GL+ V
Sbjct: 186 SQKLAAEALGLF-RLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIV 244
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
V NAL+ MY KC +++ ++ FE ++N ++W+++I G +++G S ++ L M
Sbjct: 245 SVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMH-- 302
Query: 296 EEGFIPDVITVVTVL 310
G P T V V+
Sbjct: 303 LSGIRPSEFTFVGVI 317
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 4/119 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC +E GK++H + F + I + L TMY+ CG D VF + R
Sbjct: 417 VLKACSSLAALEQGKQIHAR-TVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPAR 475
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFG 219
++ WNA++SG ++N + L +F E+ + KPD TF ++ AC G+ + G+G
Sbjct: 476 DVISWNAMISGLSQNGCGKEALELFEEMQLEGT-KPDYVTFVNILSACSHMGLVERGWG 533
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 111/210 (52%), Gaps = 3/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
L+ AC KD+ +G ++H + ++ + L+ MY+ CG +R+VFD L
Sbjct: 184 ATLVSACAELKDLGVGMKLHSHIR-EMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLS 242
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
++++ W+AL+ G+ KN T+ L +F E++ + ++P+ T VI AC + D+ G
Sbjct: 243 DKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGR 302
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH + V ++N+LI M+ KC ++ ++F+ M ++L+SWNS++ G + +G
Sbjct: 303 WVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHG 362
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ M + PD IT + VL
Sbjct: 363 LGREALAQFHLMQTTD--LQPDEITFIGVL 390
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 109/208 (52%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C + ++GK +H V +D I T L+ MY+ CG +R +F+ + R
Sbjct: 85 LLKGCALLLEFKVGKVLHGQV-VKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHR 143
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N W +++SG+ KN + L ++ ++ D PD T ++ AC + D+G G +
Sbjct: 144 NKVVWTSMISGYMKNHCPNEALLLYKKMEEDG-FSPDEVTMATLVSACAELKDLGVGMKL 202
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +M + + +AL+ MY KC ++ ++F+ + ++++ +W+++I G+ +N S
Sbjct: 203 HSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRS 262
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L ++ G P+ +T++ V+
Sbjct: 263 TEALQLFREVAG-GSNMRPNEVTILAVI 289
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 2/156 (1%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VF + ++ WN+++ F + + L + E+ + PD FTFP ++K C +
Sbjct: 34 VFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLL 93
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+ G +HG K L D+++ L+ MY C ++ LFE M RN V W S+I
Sbjct: 94 EFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMIS 153
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G+ +N E+ L KM E+GF PD +T+ T++
Sbjct: 154 GYMKNHCPNEALLLYKKME--EDGFSPDEVTMATLV 187
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Query: 82 KALSLLQENLHNADLK--EATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
+AL L +E ++++ E T + ++ AC D+E G+ VH+ ++ TQ + +N
Sbjct: 264 EALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYIT-RTQKGHSVSLNNS 322
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI M+S CG ++R+FDS+ ++L WN++V+G + L + L+ F L T+L+P
Sbjct: 323 LIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQF-HLMQTTDLQP 381
Query: 199 DNFTFPCVIKACGGIADVGFGS----------GVHGMAAKMGLIGDVFVSNALIAMYGKC 248
D TF V+ AC V G GV + G + D+ L+A
Sbjct: 382 DEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAE---- 437
Query: 249 AFVEEMVKLFEVMPERNLVSWNSII 273
E +++ + P+ + W S++
Sbjct: 438 --AREFIRVMPLQPDGAI--WGSML 458
>gi|255565124|ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537116|gb|EEF38749.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 611
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 116/210 (55%), Gaps = 8/210 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQ C + K + GK++H+ ++ S + F++ T+LI MY+ C ++R+FD +
Sbjct: 1 MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFML-TKLIQMYADCDHLFSAQRLFDKMPQP 59
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N++ W A+ + ++ +Y + + + +++ PDN+ FP V++AC + G +
Sbjct: 60 NVYAWTAIFGFYLRHGMYDKCVQNYGFMKY-SDVLPDNYVFPKVLRACTQLLWFEGGIWI 118
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G ++ V N+LI MY KC +FE M ER+L SWNS+I G+ NG +
Sbjct: 119 HKDVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSNGLA 178
Query: 283 CESFDLLIKMMGCE--EGFIPDVITVVTVL 310
DL ++++ C +GF PDV+T T++
Sbjct: 179 ----DLAVELLNCMRLDGFEPDVVTWNTLM 204
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 14/240 (5%)
Query: 75 EESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHEL---VSASTQFSN 131
E SL ++ + + DL VL+ +C H + GK +H + +T F +
Sbjct: 243 EHDMSLRVFQDMIIREVVSPDLDCLCSVLV-SCRHIGALRSGKEIHGYGTKMETNTVFYS 301
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
L+TMY+ CG D+ VF+ + ++ WNA++ GF + +L + F E+
Sbjct: 302 S--AGAALLTMYAKCGRIQDAINVFELMDKSDIVTWNAMILGFVELDLGKQAIECFREMQ 359
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK-MGLIGDVFVSNALIAMYGKCAF 250
++K D T ++ C D+ +G+ +H K + L V V NA+I MY KC
Sbjct: 360 R-MDIKNDQTTISTILPVC----DLQYGNPIHAYVRKSITLSSVVTVWNAVIHMYCKCGC 414
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
V +F MP +++VSWN++I GF +G + LL +M+ G P+ T +VL
Sbjct: 415 VRSAYTIFCSMPNKDVVSWNTMIGGFGMHGHGQAALKLLKEMI--LSGIFPNSTTFTSVL 472
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 6/186 (3%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F D + L+ Y G ++ V ++ N+ W L+S ++K + L +F
Sbjct: 193 FEPDVVTWNTLMDAYCQMGRFDEAWEVLKQIEQPNIISWTTLISSYSKIGEHDMSLRVFQ 252
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSN---ALIAMY 245
++ + PD V+ +C I + G +HG KM VF S+ AL+ MY
Sbjct: 253 DMIIREVVSPDLDCLCSVLVSCRHIGALRSGKEIHGYGTKME-TNTVFYSSAGAALLTMY 311
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
KC +++ + +FE+M + ++V+WN++I GF E ++ + +M + D T
Sbjct: 312 AKCGRIQDAINVFELMDKSDIVTWNAMILGFVELDLGKQAIECFREMQRMD--IKNDQTT 369
Query: 306 VVTVLP 311
+ T+LP
Sbjct: 370 ISTILP 375
>gi|302143464|emb|CBI22025.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 120/241 (49%), Gaps = 39/241 (16%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCG-----------FP-- 149
LLQ+C E + +GK++H L+ S S+ FI N L+ +YS CG P
Sbjct: 58 LLQSCISENSLSLGKQLHSLIITSGCSSDKFISN-HLLNLYSKCGQLDTAITLFGVMPRK 116
Query: 150 ------------------LDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ +R++FD + RN+ WNA+V+G + E + L +F ++
Sbjct: 117 NIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMN 176
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ PD F V++ C G+ + G VHG K G ++ V ++L MY KC +
Sbjct: 177 -ELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSL 235
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL--LIKMMGCEEGFIPDVITVVTV 309
E +L MP +N+V+WN++I G ++NG+ E D ++KM GF PD IT V+V
Sbjct: 236 GEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKM----AGFRPDKITFVSV 291
Query: 310 L 310
+
Sbjct: 292 I 292
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 98/194 (50%), Gaps = 2/194 (1%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A G +L+ C + + G++VH V F + ++ + L MY CG + R+ +
Sbjct: 186 ALGSVLRGCAGLRALVAGRQVHGYVR-KCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRA 244
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ ++N+ WN L++G +N +VL + + +PD TF VI +C +A +G
Sbjct: 245 MPSQNVVAWNTLIAGRAQNGYPEEVLDQY-NMMKMAGFRPDKITFVSVISSCSELATLGQ 303
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G +H K G V V ++LI+MY +C +E +K+F ++V W+S+I +
Sbjct: 304 GQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGF 363
Query: 279 NGFSCESFDLLIKM 292
+G E+ DL +M
Sbjct: 364 HGRGVEAIDLFNQM 377
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 35/155 (22%)
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
F SS +P F+ ++++C + G +H + G D F+SN L+ +Y
Sbjct: 41 FDRFSSHIWSEPSLFSH--LLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYS 98
Query: 247 KCAFVEEMV-------------------------------KLFEVMPERNLVSWNSIICG 275
KC ++ + K+F+ MPERN+ +WN+++ G
Sbjct: 99 KCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAG 158
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ F+ E L +M E GF+PD + +VL
Sbjct: 159 LIQFEFNEEGLGLFSRMN--ELGFLPDEFALGSVL 191
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 86/175 (49%), Gaps = 8/175 (4%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++ +C + G+++H E++ A I + LI+MYS CG S +VF +
Sbjct: 291 VISSCSELATLGQGQQIHAEVIKAGASLIVSVI--SSLISMYSRCGCLEYSLKVFLECEN 348
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFG 219
++ W+++++ + + + + +F ++ + +L+ ++ TF ++ AC G+ + G
Sbjct: 349 GDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQE-KLEANDVTFLSLLYACSHCGLKEKGI- 406
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSII 273
M K G+ + ++ + G+ VEE L MP + ++++W +++
Sbjct: 407 KFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLL 461
>gi|326490736|dbj|BAJ90035.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511421|dbj|BAJ87724.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 801
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 101/190 (53%), Gaps = 3/190 (1%)
Query: 122 LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYT 181
L+ ++ ND + + I M+S +R VFD +N+ WN +++G+ +N ++
Sbjct: 233 LIKHGVEYVNDLFVVSSAIGMFSEISDVQSARMVFDRAGKKNIEVWNTMITGYVQNGQFS 292
Query: 182 DVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK-MGLIGDVFVSNA 240
+ +F+++ E+ D TF + A DV G +HG K M V + NA
Sbjct: 293 QAMDLFIQILGSKEVPSDVVTFLSAVTAASQSQDVRLGQQLHGYLMKGMHSTLPVILGNA 352
Query: 241 LIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI 300
L+ MY +C V+ +LF+ +PE+++VSWN++I F +N F E L+ +M + GFI
Sbjct: 353 LVVMYSRCGNVQTAFELFDRLPEKDIVSWNTMITAFVQNDFDLEGLLLVYQMQ--KSGFI 410
Query: 301 PDVITVVTVL 310
PD +T+ VL
Sbjct: 411 PDTVTLTAVL 420
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 102/207 (49%), Gaps = 5/207 (2%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
A +D+ +G+++H + + I+ L+ MYS CG + +FD L +++
Sbjct: 320 AASQSQDVRLGQQLHGYLMKGMHSTLPVILGNALVVMYSRCGNVQTAFELFDRLPEKDIV 379
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
WN +++ F +N+ + L + ++ + PD T V+ A D+ G HG
Sbjct: 380 SWNTMITAFVQNDFDLEGLLLVYQMQK-SGFIPDTVTLTAVLSAASNTGDLQIGKQSHGY 438
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENGFSCE 284
+ G+ G+ S LI MY K ++ ++F+ +R+ V+WN++I G++++G E
Sbjct: 439 LIRHGIEGEGLESY-LIDMYSKSGRIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSG-QPE 496
Query: 285 SFDLLIKMMGCEEGFIPDVITVVTVLP 311
L + M E G P +T+ +VLP
Sbjct: 497 QAVLQFRAM-IEAGVEPTSVTLASVLP 522
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 9/212 (4%)
Query: 102 VLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL- 159
+L A + D++IGK+ H L+ + + + LI MYS G ++RVFD
Sbjct: 418 AVLSAASNTGDLQIGKQSHGYLIRHGIEGEG---LESYLIDMYSKSGRIDMAQRVFDGYG 474
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD-VGF 218
R+ WNA+++G+T++ + F + + ++P + T V+ AC + V
Sbjct: 475 NDRDEVTWNAMIAGYTQSGQPEQAVLQFRAMI-EAGVEPTSVTLASVLPACDPVGGGVCA 533
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G +H A + L +VFV AL+ MY KC + +F M E++ V++ ++I G +
Sbjct: 534 GKQIHSFALRHSLDTNVFVGTALVDMYSKCGEISAAENVFGGMTEKSTVTYTTMISGLGQ 593
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+GF + L M ++G PD +T + +
Sbjct: 594 HGFGERALSLFYSMR--DKGLKPDAVTFLAAI 623
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 111/216 (51%), Gaps = 13/216 (6%)
Query: 104 LQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDS-----RRVFD 157
L AC + + +G+ VH L+ + + ++ L+ +Y+ C RR+FD
Sbjct: 107 LTACARSRRLRLGRSVHAHLLRRARSLPDTAVLRNSLLNLYASCARHRRGGVDVVRRLFD 166
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
++ +N+ WN L + K + L +F + D ++P +F V A G D
Sbjct: 167 AMPKKNVVSWNTLFGWYVKTGRPDEALEMFARMLEDG-VRPTPVSFVNVFPAAGS-GDPS 224
Query: 218 FGSGVHGMAAKMGL--IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
+ ++G+ K G+ + D+FV ++ I M+ + + V+ +F+ ++N+ WN++I G
Sbjct: 225 WPFLLYGLLIKHGVEYVNDLFVVSSAIGMFSEISDVQSARMVFDRAGKKNIEVWNTMITG 284
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIP-DVITVVTVL 310
+ +NG ++ DL I+++G +E +P DV+T ++ +
Sbjct: 285 YVQNGQFSQAMDLFIQILGSKE--VPSDVVTFLSAV 318
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 168 NALVSGFTKNELYTDVLSIFVELSSDTELKP--DNFTFPCVIKACGGIADVGFGSGVHG- 224
N L+ + L L ++ L+ P D++T+ C + AC + G VH
Sbjct: 66 NVLLIAYVAGALPDHALRLYALLNHAARPAPRSDHYTYSCALTACARSRRLRLGRSVHAH 125
Query: 225 -MAAKMGLIGDVFVSNALIAMYGKCAF-----VEEMVKLFEVMPERNLVSWNSIICGFSE 278
+ L + N+L+ +Y CA V+ + +LF+ MP++N+VSWN++ + +
Sbjct: 126 LLRRARSLPDTAVLRNSLLNLYASCARHRRGGVDVVRRLFDAMPKKNVVSWNTLFGWYVK 185
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G E+ ++ +M+ E+G P ++ V V P
Sbjct: 186 TGRPDEALEMFARML--EDGVRPTPVSFVNVFP 216
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 4/167 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK++H + +N F+ T L+ MYS CG + VF + ++ + ++SG
Sbjct: 534 GKQIHSFALRHSLDTNVFV-GTALVDMYSKCGEISAAENVFGGMTEKSTVTYTTMISGLG 592
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
++ LS+F + D LKPD TF I AC V G ++ GL
Sbjct: 593 QHGFGERALSLFYSMR-DKGLKPDAVTFLAAISACNYSGLVDEGLSLYRSMETFGLAATP 651
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVS-WNSIICGFSENG 280
++ + K V+E E + E N ++ W S++ G
Sbjct: 652 QHHCCIVDLLAKAGRVDEAYDFVESLGEDGNFIAIWGSLLASCKAQG 698
>gi|225216882|gb|ACN85180.1| EMB2261 putative [Oryza nivara]
gi|225216899|gb|ACN85196.1| EMB2261 putative [Oryza rufipogon]
Length = 615
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 113/210 (53%), Gaps = 6/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G ++ A G+ K G++ H V + + I+ + + MY+ CG +++ +VFD ++
Sbjct: 249 GSMMTALGNSKRGSQGRQAHAQV-VTRGLCGNVIVESSTLDMYAKCGLMVEAHKVFDRMQ 307
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN AL+ G+ +N Y V+++F E+ + D ++ V++AC G++ V G
Sbjct: 308 VRNEVSRCALLGGYCQNGEYEKVIALFREMDKE---DGDWYSLGTVLRACAGLSSVKPGK 364
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H +M DV V +AL+ +Y KC V+ +FE RN ++WN++I GF++NG
Sbjct: 365 EIHCRFLRMAGWRDVVVESALVDLYAKCGAVDYAYSVFEASTVRNTITWNAMIGGFAQNG 424
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L +M+ EG PD I+ + VL
Sbjct: 425 HGERAINLFNRMV--REGPRPDYISFIGVL 452
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 113/235 (48%), Gaps = 10/235 (4%)
Query: 81 NKALSLLQENLHNADLK-----EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
+AL+ L++ L AD A ++AC +D G +H V F +D ++
Sbjct: 122 RRALASLRDMLAGADDDVSPNAHALSAAVKACAVLRDRNAGACLHGSVLVRG-FGDDGVV 180
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
+ L+ MY P D+R+VF+ ++ + + +L+S F +N+ + + + F +
Sbjct: 181 LSSLVDMYGHVAAPGDARKVFEEMRAPDGICYTSLISAFVRNDWFEEAVRWFRSMLMMNG 240
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
++PD TF ++ A G G H GL G+V V ++ + MY KC + E
Sbjct: 241 VRPDGCTFGSMMTALGNSKRGSQGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGLMVEAH 300
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F+ M RN VS +++ G+ +NG E L + M E+G D ++ TVL
Sbjct: 301 KVFDRMQVRNEVSRCALLGGYCQNG-EYEKVIALFREMDKEDG---DWYSLGTVL 351
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA-FVEEMVKLFEVMPERNLVSWNSIICGF 276
G +HG AA+ GL+ D +++NAL+A Y + + ++ F+ +P R++V+ +SI+ F
Sbjct: 56 LGCCLHGRAARAGLLADRYLANALLAFYVRLPRHLPHALRAFDDLPRRDVVAHSSILAAF 115
Query: 277 SENGFSCESFDLLIKMM-GCEEGFIPDV 303
G + L M+ G ++ P+
Sbjct: 116 LRAGMPRRALASLRDMLAGADDDVSPNA 143
>gi|356502573|ref|XP_003520093.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 503
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 2/195 (1%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
K+ H V + FI RLI YS +R+VFD+L ++F N ++ +
Sbjct: 37 KKAHAQVVVRGHEQDPFIA-ARLIDKYSHFSNLDHARKVFDNLSEPDVFCCNVVIKVYAN 95
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF 236
+ + + L ++ + + P+ +T+P V+KACG G +HG A K G+ D+F
Sbjct: 96 ADPFGEALKVYDAMRW-RGITPNYYTYPFVLKACGAEGASKKGRVIHGHAVKCGMDLDLF 154
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCE 296
V NAL+A Y KC VE K+F+ +P R++VSWNS+I G++ NG+ ++ L M+ E
Sbjct: 155 VGNALVAFYAKCQDVEVSRKVFDEIPHRDIVSWNSMISGYTVNGYVDDAILLFYDMLRDE 214
Query: 297 EGFIPDVITVVTVLP 311
PD T VTVLP
Sbjct: 215 SVGGPDHATFVTVLP 229
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG E + G+ +H + D + L+ Y+ C SR+VFD + R
Sbjct: 124 VLKACGAEGASKKGRVIHGH-AVKCGMDLDLFVGNALVAFYAKCQDVEVSRKVFDEIPHR 182
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK-PDNFTFPCVIKACGGIADVGFGSG 221
++ WN+++SG+T N D + +F ++ D + PD+ TF V+ A AD+ G
Sbjct: 183 DIVSWNSMISGYTVNGYVDDAILLFYDMLRDESVGGPDHATFVTVLPAFAQAADIHAGYW 242
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K + D V LI++Y C +V +F+ + +R+++ W++II + +G
Sbjct: 243 IHCYIVKTRMGLDSAVGTGLISLYSNCGYVRMARAIFDRISDRSVIVWSAIIRCYGTHGL 302
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ L +++G G PD + + +L
Sbjct: 303 AQEALALFRQLVGA--GLRPDGVVFLCLL 329
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 2/160 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L A DI G +H + T+ D + T LI++YS CG+ +R +FD + R
Sbjct: 227 VLPAFAQAADIHAGYWIHCYI-VKTRMGLDSAVGTGLISLYSNCGYVRMARAIFDRISDR 285
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+A++ + + L + L++F +L L+PD F C++ AC + G +
Sbjct: 286 SVIVWSAIIRCYGTHGLAQEALALFRQLVG-AGLRPDGVVFLCLLSACSHAGLLEQGWHL 344
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
G+ ++ + G+ +E+ V+ + MP
Sbjct: 345 FNAMETYGVAKSEAHYACIVDLLGRAGDLEKAVEFIQSMP 384
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 119/238 (50%), Gaps = 12/238 (5%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
E K+L+ + +LQ + + G +L+AC + + G +H + S + D +
Sbjct: 395 EEKTLSLFVWMLQSGMEPDEF--TYGSVLKACAGWQALNCGMEIHNRIIKS-RMGLDSFV 451
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT---KNELYTDVLSIFVELSS 192
LI MYS CG + ++ D L + + WNA++SGF+ ++E S +E+
Sbjct: 452 GIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGV 511
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
D PDNFT+ ++ C + V G +H K L D ++S+ L+ MY KC ++
Sbjct: 512 D----PDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQ 567
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +FE P R+ V+WN+++CG++++G E+ + M E P+ T + VL
Sbjct: 568 DFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQ--LENVKPNHATFLAVL 623
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 24/249 (9%)
Query: 63 GLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHEL 122
G L C ++ L L L +E +++A LQ GH
Sbjct: 196 GSALLDMYAKCCVQNDDLRGGLELFKE------MQKAGVGALQLHGH------------- 236
Query: 123 VSASTQFSNDFIINTRLITMYSLCGFPLD-SRRVFDSLKTRNLFQWNALVSGFTKNELYT 181
+ T F D +I T + MY C D S ++F+SL NL +NA++ G+ +++
Sbjct: 237 -ALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGI 295
Query: 182 DVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNAL 241
+ L +F L + L D + +AC I G VHG++ K ++ V+NA+
Sbjct: 296 EALGMF-RLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAI 354
Query: 242 IAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIP 301
+ MYGKC + E +FE M R+ VSWN+II +NG ++ L + M+ + G P
Sbjct: 355 LDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWML--QSGMEP 412
Query: 302 DVITVVTVL 310
D T +VL
Sbjct: 413 DEFTYGSVL 421
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 107/206 (51%), Gaps = 9/206 (4%)
Query: 72 TLCEESKSLNKALS-LLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFS 130
+L ++S+ K S +L+ + + AT +L C + +E+GK++H + +
Sbjct: 491 SLQKQSEEAQKTFSKMLEMGVDPDNFTYAT--ILDTCANLVTVELGKQIHAQI-IKKELQ 547
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
+D I++ L+ MYS CG D + +F+ R+ WNA+V G+ ++ L + L IF E
Sbjct: 548 SDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIF-EY 606
Query: 191 SSDTELKPDNFTFPCVIKACG--GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
+KP++ TF V++ACG G+ + G H M + GL + + ++ + G+
Sbjct: 607 MQLENVKPNHATFLAVLRACGHMGLVEKGLHY-FHSMLSNYGLDPQLEHYSCVVDIMGRS 665
Query: 249 AFVEEMVKLFEVMP-ERNLVSWNSII 273
V + ++L E MP E + V W +++
Sbjct: 666 GQVSKALELIEGMPFEADAVIWRTLL 691
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC---GFPLDSRRVFDSL 159
+ Q C K + GK+ H + T+F + LI MY C GF +VFD +
Sbjct: 48 IFQECSDRKALCPGKQAHARM-ILTEFKPTVFVTNCLIQMYIKCSDLGFAF---KVFDGM 103
Query: 160 KTRNLFQWNALVSGFT-------KNELYT-------DVLSIFVELSSDTELKPDNFTFPC 205
R+ WNA++ G+ +L+ V+ +F D TF
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAV 163
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
V+K+C + D G G +HG+A KMG DV +AL+ MY KC
Sbjct: 164 VLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKC 206
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%)
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
TF + + C + G H VFV+N LI MY KC+ + K+F+ M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103
Query: 262 PERNLVSWNSIICGFSENG 280
P+R+ VSWN+++ G++ G
Sbjct: 104 PQRDTVSWNAMLFGYAGRG 122
>gi|356561520|ref|XP_003549029.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Glycine max]
Length = 506
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 100/174 (57%), Gaps = 3/174 (1%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
T LI Y G D+ RVF + RN+ WNA+V G ++ + ++ F+ + + +
Sbjct: 151 TTLICGYLKRGRFEDALRVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIGMLREGFI 210
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
P+ TFPCVI A IA +G G H A K D FV N+LI+ Y KC +E+ +
Sbjct: 211 -PNESTFPCVICAAANIASLGIGKSFHACAIKFLGKVDQFVGNSLISFYAKCGSMEDSLL 269
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ + +RN+VSWN++ICG+++NG E+ +M C EG+ P+ +T++ +L
Sbjct: 270 MFDKLFKRNIVSWNAMICGYAQNGRGAEAISFFERM--CSEGYKPNYVTLLGLL 321
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 71/127 (55%), Gaps = 1/127 (0%)
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
++F+ + + ++ GF K + D + +F ++ + ++++P+ FTF +I + +
Sbjct: 36 QLFEEMSDLTVASATTMIQGFVKRHCHEDAIYLFSKMLA-SKIRPNEFTFGTLINSSAAL 94
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
+V G +H A K+GL VFV ++L+ +Y K + +E+ K F N+VS+ ++I
Sbjct: 95 GNVVVGKQLHACAMKIGLSCHVFVGSSLLDLYFKQSTIEDAQKAFGDTQHPNVVSYTTLI 154
Query: 274 CGFSENG 280
CG+ + G
Sbjct: 155 CGYLKRG 161
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 8/165 (4%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
IGK H + F+ N+ LI+ Y+ CG DS +FD L RN+ WNA++ G+
Sbjct: 231 IGKSFHACAIKFLGKVDQFVGNS-LISFYAKCGSMEDSLLMFDKLFKRNIVSWNAMICGY 289
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLI 232
+N + +S F + S+ KP+ T ++ AC G+ D G+ GL+
Sbjct: 290 AQNGRGAEAISFFERMCSEG-YKPNYVTLLGLLWACNHAGLVDEGYSYFNRARLESPGLL 348
Query: 233 GDVFVSNA--LIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
+ L+A G+ A E+ ++ P L W +++ G
Sbjct: 349 KSEHYACMVNLLARSGRFAEAEDFLQSVPFDP--GLGFWKALLAG 391
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 111/212 (52%), Gaps = 6/212 (2%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
T +L AC + +G+ VH L S D L+ MY+ C D+R VF+++
Sbjct: 342 TSSVLSACAQTGSLNMGRSVHCL--GIKLGSEDATFENALVDMYAKCHMIGDARYVFETV 399
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+++ WN+++SG+T+N + L +F ++ SD+ + PD T V+ AC + G
Sbjct: 400 FDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDS-VYPDAITLVSVLSACASVGAYRVG 458
Query: 220 SGVHGMAAKMGLI-GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
S +HG A K GL+ G V+V AL+ Y KC E +F+ M E+N ++W+++I G+
Sbjct: 459 SSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMIGGYGI 518
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G S +L M+ +E P+ + T+L
Sbjct: 519 QGDCSRSLELFGDML--KEKLEPNEVIFTTIL 548
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 111/210 (52%), Gaps = 5/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G L+ AC + GK VH V S N F++ T L+ +Y CG D+ VFD L
Sbjct: 242 GSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLV-TPLLDLYFKCGDIRDAFSVFDELS 300
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
T +L W A++ G+ + + L +F + +L P+ T V+ AC + G
Sbjct: 301 TIDLVSWTAMIVGYAQRGYPREALKLFTD-ERWKDLLPNTVTTSSVLSACAQTGSLNMGR 359
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH + K+G D NAL+ MY KC + + +FE + ++++++WNSII G+++NG
Sbjct: 360 SVHCLGIKLG-SEDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNG 418
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ E+ +L +M + PD IT+V+VL
Sbjct: 419 YAYEALELFDQMR--SDSVYPDAITLVSVL 446
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 110/210 (52%), Gaps = 7/210 (3%)
Query: 102 VLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
++L+AC ++ + G+++H ++V S D + T L+ MY+ C DSRRVFD +
Sbjct: 143 IVLKACSELRETDEGRKLHCQIVKVG---SPDSFVLTGLVDMYAKCREVEDSRRVFDEIL 199
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN+ W +++ G+ +N+ + L +F + ++ + +T ++ AC + + G
Sbjct: 200 DRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGL-VEGNQYTLGSLVTACTKLGALHQGK 258
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VHG K G + F+ L+ +Y KC + + +F+ + +LVSW ++I G+++ G
Sbjct: 259 WVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRG 318
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ L + +P+ +T +VL
Sbjct: 319 YPREALKLFTDERW--KDLLPNTVTTSSVL 346
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 96/189 (50%), Gaps = 15/189 (7%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
+++H L+ S D + T+L+++Y G +R +FD ++ +L+ W ++ +
Sbjct: 56 RKIHALLVVHG-LSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYFL 114
Query: 177 NELYTDVLSIFVELSSDTELKP-----DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
N+ Y++++ + +T L+ DN F V+KAC + + G +H K+G
Sbjct: 115 NDSYSEIVQFY-----NTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVG- 168
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
D FV L+ MY KC VE+ ++F+ + +RN+V W S+I G+ +N E L +
Sbjct: 169 SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNR 228
Query: 292 MMGCEEGFI 300
M EG +
Sbjct: 229 M---REGLV 234
>gi|218192399|gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indica Group]
Length = 703
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 97/183 (53%), Gaps = 8/183 (4%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
D ++ + L MY+ CG D+RRVFD + R+ W A+V + + +F+ +
Sbjct: 200 GDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHM 259
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
++P+ FT+ V++AC A FG VHG AK G F +AL+ MY KC
Sbjct: 260 LRTRGVRPNEFTYAGVLRACAEFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGD 319
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES---FDLLIKMMGCEEGFIPDVITVV 307
+ V++FE M + +LVSW ++I G+++NG E+ FD+ ++ G PD +T V
Sbjct: 320 MGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLR-----SGIKPDHVTFV 374
Query: 308 TVL 310
VL
Sbjct: 375 GVL 377
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 16/169 (9%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL-------SSDTELKPDNFTFP 204
+R +FD + R+ F W+ALVSG+ ++ L+++ + +D E +
Sbjct: 114 ARELFDRMPQRDHFAWSALVSGYARHGQPEAALALYRRMQEEPGNDGADNEFTASSALAA 173
Query: 205 CVIKACGGIADVGFGSGVHGMAAKMGLI---GDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
CG G +H + G+ GD + +AL MY KC V++ ++F+ M
Sbjct: 174 AAAARCGRA-----GRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRM 228
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
P R+ VSW +++ + + G E F L + M+ G P+ T VL
Sbjct: 229 PVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRT-RGVRPNEFTYAGVL 276
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC G++VH ++ S + F + L+ MYS CG + RVF+++
Sbjct: 275 VLRACAEFAVESFGRQVHGRMAKSGTGDSCFA-ESALLRMYSKCGDMGSAVRVFEAMAKP 333
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGF 218
+L W A++SG+ +N + L F ++ + +KPD+ TF V+ AC G+ D G
Sbjct: 334 DLVSWTAVISGYAQNGQPEEALRYF-DMFLRSGIKPDHVTFVGVLSACAHAGLVDKGL 390
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 116/211 (54%), Gaps = 8/211 (3%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQF--SNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
V+L +C +++G +VH SAS +F ND + + L+ MYS CG +R +F+ +
Sbjct: 421 VILSSCSRLGILDLGTQVH---SASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRM 477
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
R++ WN+++SG + L + F ++ + + P ++ +I +C ++ V G
Sbjct: 478 TERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNG-MMPTESSYASMINSCARLSSVPQG 536
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H K G +V+V +ALI MY KC +++ F+ M +N+V+WN +I G+++N
Sbjct: 537 RQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQN 596
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
GF ++ DL M+ E+ PD +T + VL
Sbjct: 597 GFGEKAVDLFEYMLTTEQR--PDGVTFIAVL 625
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 35/212 (16%)
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVF-------------------------------DS 158
++ F+IN RL+ +YS+ G P D+ R F D
Sbjct: 41 ADTFLIN-RLVELYSVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAARALLDE 99
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ RN+ WN +++ ++E + L ++ + + L P +FT V+ ACG +A +
Sbjct: 100 MPDRNVVSWNTVIAALARSERAGEALELYEGMLREG-LVPTHFTLASVLSACGAVAALDD 158
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G HG+A K+GL ++FV NAL+ MY KC VE+ V+LF+ M N VS+ +++ G +
Sbjct: 159 GRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQ 218
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G ++ L +M C G D + V +VL
Sbjct: 219 AGSVDDALRLFARM--CRSGVRVDPVAVSSVL 248
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 83/152 (54%), Gaps = 3/152 (1%)
Query: 150 LDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKA 209
L +R +FD + ++ WN L+SG+ + EL+ D + +F + ++PD T ++ +
Sbjct: 367 LSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQN-VQPDRTTLAVILSS 425
Query: 210 CGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSW 269
C + + G+ VH + + L D+FV++ L+ MY KC + +F M ER++V W
Sbjct: 426 CSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCW 485
Query: 270 NSIICGFSENGFSCESFDLLIKMMGCEEGFIP 301
NS+I G + + + E+FD +M G G +P
Sbjct: 486 NSMISGLAIHSLNEEAFDFFKQMRG--NGMMP 515
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 12/216 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG ++ G+R H L N F+ N L+ MY+ CG D+ R+FD + +
Sbjct: 146 VLSACGAVAALDDGRRCHGLAVKVGLDENLFVENA-LLGMYTKCGGVEDAVRLFDGMASP 204
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVI----KACGGIADV-- 216
N + A++ G + D L +F + + ++ D V+ +AC DV
Sbjct: 205 NEVSFTAMMGGLVQAGSVDDALRLFARMCR-SGVRVDPVAVSSVLGSCAQACASEFDVVR 263
Query: 217 --GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
G +H + + G D V N+LI MY KC ++E VK+F+ +P + VSWN +I
Sbjct: 264 AFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILIT 323
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
GF + G ++ ++L M E G P+ +T +L
Sbjct: 324 GFGQAGSYAKALEVLNLME--ESGSEPNEVTYSNML 357
>gi|357464861|ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
gi|355491760|gb|AES72963.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
Length = 867
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 123/250 (49%), Gaps = 14/250 (5%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADL----KEATGVLLQACGHEKDIEIGKRVHELVSA 125
I +LC +S+ N+ALS L ++ E +L++C +GK +H V
Sbjct: 7 IRSLCVDSRH-NEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLHSYVVK 65
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT---KNELYTD 182
S + + L+ MY+ CG D ++FD + WN ++SG++ KN+ D
Sbjct: 66 QGHVSCH-VTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKND--AD 122
Query: 183 VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALI 242
V+ +F + S E+ P + T V+ C ++ G VHG K G D F NAL+
Sbjct: 123 VMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALV 182
Query: 243 AMYGKCAFVE-EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIP 301
+MY KC V + +F+ + +++VSWN++I G +ENG E+F L MM + P
Sbjct: 183 SMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMM--KGSVKP 240
Query: 302 DVITVVTVLP 311
+ TV +LP
Sbjct: 241 NYATVANILP 250
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 3/196 (1%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+++H V + S D + L++ Y G ++ +F ++ R+L WN +++G+
Sbjct: 264 GRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYA 323
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG-LIGD 234
N + L +F L S L D+ T ++ AC + ++ G VH + L D
Sbjct: 324 LNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFED 383
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
NAL++ Y KC ++EE F ++ ++L+SWNSI+ F E LL M+
Sbjct: 384 TSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLK 443
Query: 295 CEEGFIPDVITVVTVL 310
+ PD +T++T++
Sbjct: 444 LD--IRPDSVTILTII 457
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 112/244 (45%), Gaps = 38/244 (15%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +++ GK+VH + D L++ Y+ CG+ ++ F + +
Sbjct: 354 ILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRK 413
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN+++ F + ++ LS+ + + +++PD+ T +I C + V +
Sbjct: 414 DLISWNSILDAFGEKRHHSRFLSL-LHVMLKLDIRPDSVTILTIIHFCASLLRVKKVKEI 472
Query: 223 HGMAAKMGLI---GDVFVSNALIAMYGKCAFVEEMVKLFEVMPE-RNLVSWNSIICG--- 275
HG + + G + V NA++ Y KC +E K+F+ + E RNLV+ NS+I G
Sbjct: 473 HGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVG 532
Query: 276 ----------------------------FSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
++EN ++ +L +K+ +G PDV+T++
Sbjct: 533 LGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQ--TQGMKPDVVTIM 590
Query: 308 TVLP 311
+++P
Sbjct: 591 SLIP 594
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Query: 167 WNALVSGFTKNELYTDVLSIFVE-LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
W + + + + + LS F L KPD+ ++K+C + G +H
Sbjct: 3 WASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLHSY 62
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
K G + S AL+ MY KC +++ KLF+ + V WN ++ G+S +G +
Sbjct: 63 VVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDAD 122
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVLP 311
+ + M +P +T+ TVLP
Sbjct: 123 VMKVFRAMHSSGEVMPSSVTIATVLP 148
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 81/172 (47%), Gaps = 4/172 (2%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI+ Y G D+ +F + +L WN +V + +N+ L +F++L + +KP
Sbjct: 526 LISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQG-MKP 584
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D T +I C +A V HG + D+ + L+ Y KC + K+F
Sbjct: 585 DVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSF-EDLHLKGTLLDAYAKCGIIGYAYKIF 643
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +++LV + ++I G++ +G S ++ + M+ G PD + ++L
Sbjct: 644 QSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHML--NMGIKPDHVIFTSIL 693
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/130 (20%), Positives = 55/130 (42%), Gaps = 10/130 (7%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ C + + ++ H + S+ D + L+ Y+ CG + ++F S +
Sbjct: 592 LIPVCTQMASVHLLRQCHGYIIRSS--FEDLHLKGTLLDAYAKCGIIGYAYKIFQSSVDK 649
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG--- 219
+L + A++ G+ + + L F + + +KPD+ F ++ AC + G
Sbjct: 650 DLVMFTAMIGGYAMHGMSEKALETFSHM-LNMGIKPDHVIFTSILSACSHAGRIAEGLKI 708
Query: 220 ----SGVHGM 225
+HGM
Sbjct: 709 FDSIEKIHGM 718
>gi|218186652|gb|EEC69079.1| hypothetical protein OsI_37958 [Oryza sativa Indica Group]
Length = 459
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 112/208 (53%), Gaps = 8/208 (3%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIIN--TRLITMYSLCGFPLDSRRVFDSLKTRN 163
ACG E++ + G +H L + + + ++N L+ MY G S RVFD + +N
Sbjct: 231 ACGMEQEEKFGLSIHAL---AVKVGLNTMVNLANALVDMYGKFGDVEASMRVFDGMLEQN 287
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WN+ + F LY DVL +F ++S + + P + T ++ A + + G VH
Sbjct: 288 EVSWNSAIGCFLNAGLYGDVLRMFRKMS-EHNVMPGSITLSSLLPALVELGSIDLGREVH 346
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G + K + D+FV+N+L+ MY K +E+ +FE M +RN+VSWN++I +NG
Sbjct: 347 GYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAET 406
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+F L+ M + G P+ IT+V VLP
Sbjct: 407 EAFRLVTDMQ--KSGECPNSITLVNVLP 432
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 101/196 (51%), Gaps = 4/196 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G +H ++ F NT L+ Y+ CG D+RRVFD + R++ WN+LVS F
Sbjct: 140 GLELHASALRRGHLADVFTGNT-LLAFYAACGKACDARRVFDEMPARDVVSWNSLVSAFL 198
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
N ++ D V + + + + V+ ACG + FG +H +A K+GL V
Sbjct: 199 VNGMFHDTRRALVSMMR-SGFPLNVASLVSVVPACGMEQEEKFGLSIHALAVKVGLNTMV 257
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
++NAL+ MYGK VE +++F+ M E+N VSWNS I F G + + KM
Sbjct: 258 NLANALVDMYGKFGDVEASMRVFDGMLEQNEVSWNSAIGCFLNAGLYGDVLRMFRKM--S 315
Query: 296 EEGFIPDVITVVTVLP 311
E +P IT+ ++LP
Sbjct: 316 EHNVMPGSITLSSLLP 331
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 5/155 (3%)
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
L+ R+ F WN+L + L ++ L ++ L + ++PD+ TFP + A
Sbjct: 79 LRLRSAFLWNSLSRALSSASLPSEALRVY-NLMLRSAVRPDDRTFPFALHAAAAAVAFAE 137
Query: 219 GSGV--HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G+ H A + G + DVF N L+A Y C + ++F+ MP R++VSWNS++ F
Sbjct: 138 DKGLELHASALRRGHLADVFTGNTLLAFYAACGKACDARRVFDEMPARDVVSWNSLVSAF 197
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
NG ++ L+ MM GF +V ++V+V+P
Sbjct: 198 LVNGMFHDTRRALVSMM--RSGFPLNVASLVSVVP 230
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 3/212 (1%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A G ++AC D+ G++VH S + S D I+ L+TMYS G D +F+
Sbjct: 137 ALGSAVRACTELGDVGTGRQVHAHALKSERGS-DLIVQNALVTMYSKNGLVDDGFMLFER 195
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+K ++L W ++++GF + + L +F E+ + P+ F F +ACG + +
Sbjct: 196 IKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEY 255
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G +HG++ K L D++V +L MY +C ++ F + +LVSWNSI+ +S
Sbjct: 256 GEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSV 315
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ L +M + G PD ITV +L
Sbjct: 316 EGLLSEALVLFSEMR--DSGLRPDGITVRGLL 345
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 26/200 (13%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSAST------QFSNDFIINTRLITMYSLCGFPLDSRR 154
L+ AC + + G+RVH + AS+ Q + + ++ LITMY
Sbjct: 48 AALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYG---------- 97
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE-LSSDTELKPDNFTFPCVIKACGGI 213
RN W ++++ +N D L +F L S T D F ++AC +
Sbjct: 98 -------RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGT--AADQFALGSAVRACTEL 148
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
DVG G VH A K D+ V NAL+ MY K V++ LFE + +++L+SW SII
Sbjct: 149 GDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSII 208
Query: 274 CGFSENGFSCESFDLLIKMM 293
GF++ GF E+ + +M+
Sbjct: 209 AGFAQQGFEMEALQVFREMI 228
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 102/190 (53%), Gaps = 4/190 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV-FDSL 159
G +ACG E G+++H L S + D + L MY+ C LDS RV F +
Sbjct: 241 GSAFRACGAVGSWEYGEQIHGL-SIKYRLDRDLYVGCSLSDMYARCK-NLDSARVAFYRI 298
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+ +L WN++V+ ++ L ++ L +F E+ D+ L+PD T ++ AC G + G
Sbjct: 299 EAPDLVSWNSIVNAYSVEGLLSEALVLFSEMR-DSGLRPDGITVRGLLCACVGRDALYHG 357
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H K+GL GDV V N+L++MY +C+ + + +F + ++++V+WNSI+ +++
Sbjct: 358 RLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQH 417
Query: 280 GFSCESFDLL 289
E L
Sbjct: 418 NHPEEVLKLF 427
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + G+ +H + D + L++MY+ C + VF +K +
Sbjct: 344 LLCACVGRDALYHGRLIHSYL-VKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQ 402
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN++++ ++ +VL +F L + +E D + V+ A + V
Sbjct: 403 DVVTWNSILTACAQHNHPEEVLKLF-SLLNKSEPSLDRISLNNVLSASAELGYFEMVKQV 461
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENGF 281
H A K GL+ D +SN LI Y KC +++ ++LFE+M R++ SW+S+I G+++ G+
Sbjct: 462 HAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGY 521
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+FDL +M G P+ +T + VL
Sbjct: 522 AKEAFDLFSRMRSL--GIRPNHVTFIGVL 548
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 109/201 (54%), Gaps = 4/201 (1%)
Query: 111 KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNAL 170
KD++ +++H + S N F+ N+ L+ Y CG D++++F +N+ W L
Sbjct: 35 KDLKPLQQIHAQIITSGLTHNTFLSNS-LMNAYVYCGLLADAKQIFHHTPYKNVVSWTIL 93
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
+SG KN+ + + + +F E+ KP+ T V+ A + + VH + G
Sbjct: 94 ISGLAKNDCFVEAIDVFREMIMGN-FKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGG 152
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
G+VFV AL+ MY K + +LFE M ERN+V+WN+I+ G+S++GFS E+ DL
Sbjct: 153 FEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFN 212
Query: 291 KMMGCEEGFIPDVITVVTVLP 311
M +G + D T+++++P
Sbjct: 213 LMR--RKGLLVDFYTIMSLIP 231
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 3/198 (1%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+++G +H + T + ND I T L+ +Y D+ RVF + +++ W +++
Sbjct: 239 LQVGTGIHGFI-IRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLT 297
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
GF+ + + F ++ LK D+ ++ +C + G VH +A K
Sbjct: 298 GFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFA 357
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
++FV +A+I MY C +E+ + F M E+++V WN++I G NG+ ++ DL ++M
Sbjct: 358 NNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQM 417
Query: 293 MGCEEGFIPDVITVVTVL 310
G G PD T V+VL
Sbjct: 418 KG--SGLDPDESTFVSVL 433
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 2/184 (1%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
I I K VH F + + T L+ MYS G +R++F+S+ RN+ WNA+VS
Sbjct: 138 IRIAKSVH-CFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVS 196
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G++ + + + +F L L D +T +I A + + G+G+HG + G
Sbjct: 197 GYSDHGFSEEAIDLF-NLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYE 255
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
D + AL+ +Y V++ ++F M +++ +W ++ GFS + KM
Sbjct: 256 NDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKM 315
Query: 293 MGCE 296
+G +
Sbjct: 316 LGIQ 319
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +C H ++ G+RVH L + T F+N+ + + +I MY+ CG D++R F + +
Sbjct: 331 ILSSCSHSGALQQGRRVHAL-AIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEK 389
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
++ WNA+++G N TD + +F+++ + L PD TF V+ AC
Sbjct: 390 DVVCWNAMIAGNGMNGYGTDAIDLFLQMKG-SGLDPDESTFVSVLYAC 436
>gi|356495279|ref|XP_003516506.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial-like [Glycine max]
Length = 944
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 116/211 (54%), Gaps = 5/211 (2%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+++ A H K+ + G+ +H VS + D + L+ MY+ CG S +++ ++
Sbjct: 197 LIVSASLHMKNFDQGRAIH-CVSIKSGMLVDISLGNALVDMYAKCGDLSSSECLYEEIEC 255
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ WN+++ G N L F +S E DN + C I A + ++ FG
Sbjct: 256 KDAVSWNSIMRGSLYNRHPEKALCYFKRMSFSEE-TADNVSLCCAISASSSLGELSFGQS 314
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VHG+ K+G V V+N+LI++Y +C ++ LF + +++VSWN+++ GF+ NG
Sbjct: 315 VHGLGIKLGYKSHVSVANSLISLYSQCEDIKAAETLFREIALKDIVSWNAMMEGFASNGK 374
Query: 282 SCESFDLLIKMMGCEEGFI-PDVITVVTVLP 311
E FDLL++M + GF PD++T++T+LP
Sbjct: 375 IKEVFDLLVQMQ--KVGFFQPDIVTLITLLP 403
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 2/183 (1%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
++ G+ VH L + + + LI++YS C + +F + +++ WNA++
Sbjct: 308 ELSFGQSVHGL-GIKLGYKSHVSVANSLISLYSQCEDIKAAETLFREIALKDIVSWNAMM 366
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
GF N +V + V++ +PD T ++ C + G +HG A + +
Sbjct: 367 EGFASNGKIKEVFDLLVQMQKVGFFQPDIVTLITLLPLCAELMLSREGRTIHGYAIRRQM 426
Query: 232 IGD-VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
I D V + N+LI MY KC VE+ LF E++ VSWN++I G+S N +S E+ +L
Sbjct: 427 ISDHVMLLNSLIGMYSKCNLVEKAELLFNSTAEKDTVSWNAMISGYSHNRYSEEAQNLFT 486
Query: 291 KMM 293
+M+
Sbjct: 487 EML 489
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 7/207 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + + +GK +H L + + +D + LITMY C ++ VF T N
Sbjct: 609 LSACANLELFNLGKSLHGL-TVKSPLGSDTRVQNSLITMYDRCRDINSAKVVFKFFSTPN 667
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L WN ++S + N + L +F+ L + +P+ T V+ AC I + G VH
Sbjct: 668 LCSWNCMISALSHNRESREALELFLNL----QFEPNEITIIGVLSACTQIGVLRHGKQVH 723
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ + + F+S ALI +Y C ++ +++F E++ +WNS+I + +G
Sbjct: 724 AHVFRTCIQDNSFISAALIDLYSNCGRLDTALQVFRHAKEKSESAWNSMISAYGYHGKGE 783
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M CE G T V++L
Sbjct: 784 KAIKLFHEM--CESGARVSKSTFVSLL 808
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 7/199 (3%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF-DSLKTRNLFQWNALV 171
I GK VH + F N ++ L+ MY CG S + ++ ++ WN L+
Sbjct: 515 IHFGKSVH-CWQLKSGFLNHILLINILMHMYINCGDLTASFSILHENSALADIASWNTLI 573
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
G + + + + L F + + L D+ T + AC + G +HG+ K L
Sbjct: 574 VGCVRCDHFREALETFNLMRQEPPLNYDSITLVSALSACANLELFNLGKSLHGLTVKSPL 633
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
D V N+LI MY +C + +F+ NL SWN +I S N S E+ +L +
Sbjct: 634 GSDTRVQNSLITMYDRCRDINSAKVVFKFFSTPNLCSWNCMISALSHNRESREALELFLN 693
Query: 292 MMGCEEGFIPDVITVVTVL 310
+ F P+ IT++ VL
Sbjct: 694 LQ-----FEPNEITIIGVL 707
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 76/140 (54%), Gaps = 1/140 (0%)
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
+T L+T+YS G S+ +FD ++ R+ WNA+V+ +N+ Y + F ++ +
Sbjct: 129 STSLLTIYSKAGDFTSSKGLFDEIQNRDAIAWNAIVAASLENKCYRIAMDFFDKMI-KAQ 187
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
D+ T ++ A + + G +H ++ K G++ D+ + NAL+ MY KC +
Sbjct: 188 TGFDSTTLLLIVSASLHMKNFDQGRAIHCVSIKSGMLVDISLGNALVDMYAKCGDLSSSE 247
Query: 256 KLFEVMPERNLVSWNSIICG 275
L+E + ++ VSWNSI+ G
Sbjct: 248 CLYEEIECKDAVSWNSIMRG 267
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 44/100 (44%)
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
+F IK C + + H A K+G + + S +L+ +Y K LF+
Sbjct: 91 HFELVDYIKLCLKKPKIVTATVAHCAALKIGALAHLPTSTSLLTIYSKAGDFTSSKGLFD 150
Query: 260 VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
+ R+ ++WN+I+ EN + D KM+ + GF
Sbjct: 151 EIQNRDAIAWNAIVAASLENKCYRIAMDFFDKMIKAQTGF 190
>gi|255559020|ref|XP_002520533.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540375|gb|EEF41946.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 547
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 127/277 (45%), Gaps = 71/277 (25%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACGH D++ GK +H ++ F +D ++NT LI MYS C +R+VFD ++ +
Sbjct: 136 VLRACGHVFDLQTGKILHSVILRHL-FESDVVVNTALIDMYSRCRHVEKARKVFDGMQEK 194
Query: 163 -----------------------------------NLFQWNALVSGFTK-------NELY 180
NL WN L+SGF + EL+
Sbjct: 195 DLVALNAMVLGYAQNGFAKEGFLLVEQMQMLDIKPNLVTWNTLISGFAQAGDKVMVQELF 254
Query: 181 ---------------TDVLSIFVELSSDTEL------------KPDNFTFPCVIKACGGI 213
T V+S FV+ S + P++ T ++ AC +
Sbjct: 255 GLMSMHGFEPDVISWTSVISRFVQNSHNEAAFAAFKQMLQHGAYPNSATISSLLPACASL 314
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
A+V G +HG A +G+ D++V +A++ MY KC + E LF MPER+ V+WNS+I
Sbjct: 315 ANVRHGRELHGYAFAIGVEEDIYVRSAIVDMYSKCGLISEARMLFSKMPERHTVTWNSMI 374
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G++ +G+ E+ +L +M E I D ++ VL
Sbjct: 375 FGYANHGYCDEAIELFNQMEKTEAKKI-DHLSFTAVL 410
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 120/209 (57%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
L++ + + GK +H L+ + SN+F ++LI+ Y+ R++FD +
Sbjct: 35 LIKTYTRDHALNQGKHLHARLIVSGLASSNNFA--SKLISFYTETRQLSIVRKLFDRIPK 92
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
N +Q L+ ++++ Y DVL +F E+ ++ L+P+ F P V++ACG + D+ G
Sbjct: 93 PNFYQRTVLIGAYSRHGFYQDVLDVFSEMQNE-RLRPNKFVIPSVLRACGHVFDLQTGKI 151
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H + + DV V+ ALI MY +C VE+ K+F+ M E++LV+ N+++ G+++NGF
Sbjct: 152 LHSVILRHLFESDVVVNTALIDMYSRCRHVEKARKVFDGMQEKDLVALNAMVLGYAQNGF 211
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E F L+ +M + P+++T T++
Sbjct: 212 AKEGFLLVEQMQMLD--IKPNLVTWNTLI 238
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 81/180 (45%), Gaps = 3/180 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC ++ G+ +H A D + + ++ MYS CG ++R +F + R
Sbjct: 307 LLPACASLANVRHGRELHGYAFA-IGVEEDIYVRSAIVDMYSKCGLISEARMLFSKMPER 365
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN+++ G+ + + + +F ++ K D+ +F V+ AC V G +
Sbjct: 366 HTVTWNSMIFGYANHGYCDEAIELFNQMEKTEAKKIDHLSFTAVLTACSHGRLVELGQSL 425
Query: 223 H-GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENG 280
M K ++ + +I + G+ + E + + MP E +L W +++ ++G
Sbjct: 426 FLLMHEKYKIVPRLEHYACMIDLLGRAGKLSEAYDMIKTMPVEPDLFVWGALLGACRQHG 485
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 98/179 (54%), Gaps = 3/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + ++ Y+ G + ++F+ +K +N+ WN+L+SG T+N Y D L F+ +
Sbjct: 387 DIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMG 446
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ + KPD TF C + +C +A + G +H + K G D+FVSNALI MY KC +
Sbjct: 447 HEGQ-KPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSI 505
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
LF+ + ++VSWNS+I ++ NG E+ L KM EG PD +T V +L
Sbjct: 506 SSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKME--VEGVAPDEVTFVGIL 562
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 13/170 (7%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
T +I Y G ++R++ + + RN+ A++SG+ +N+ D IF ++S +
Sbjct: 299 TTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVV 358
Query: 197 KPDNFTFPCVIKACGGIADVG-FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
C G + G +H K + D+ N ++A Y + ++ +
Sbjct: 359 --------CWNTMIAGYSQCGRMDEALHLF--KQMVKKDIVSWNTMVASYAQVGQMDAAI 408
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
K+FE M E+N+VSWNS+I G ++NG ++ + +MG EG PD T
Sbjct: 409 KIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFM-LMG-HEGQKPDQST 456
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L +C H +++GK++H+LV S ++ D ++ LITMY+ CG + +F + +
Sbjct: 461 LSSCAHLAALQVGKQLHQLVMKSG-YATDLFVSNALITMYAKCGSISSAELLFKDIDHFD 519
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGF 218
+ WN+L++ + N + L +F ++ + + PD TF ++ AC G+ D G
Sbjct: 520 VVSWNSLIAAYALNGNGREALKLFHKMEVEG-VAPDEVTFVGILSACSHVGLIDQGL 575
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 83/159 (52%), Gaps = 16/159 (10%)
Query: 140 ITMYSLCGFP-----LDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+TM LCGF ++RR+FD + RN+ WNA+++ + +N + +S+F+E+
Sbjct: 237 VTM--LCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMP--- 291
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+ ++ ++ VI G +G + +M +V A+I+ Y + +++
Sbjct: 292 --EKNSISWTTVI---NGYVRMGKLDEARQLLNQMPY-RNVAAQTAMISGYVQNKRMDDA 345
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
++F + R++V WN++I G+S+ G E+ L +M+
Sbjct: 346 RQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMV 384
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE 189
+ D + ++T Y+ G + F+ + R++ WN +V GF + F +
Sbjct: 168 AKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEK 227
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
+ P+ T V C G A G + + +M I +V NA+IA Y +
Sbjct: 228 I-------PNPNTVSWVTMLC-GFARFGKIAEARRLFDQMP-IRNVVAWNAMIAAYVQNC 278
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
V+E + LF MPE+N +SW ++I G+ G E+ LL +M
Sbjct: 279 HVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQM 321
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 39/130 (30%)
Query: 151 DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
++R++FD + TR+L+ W +++ +T+N ++F L P + C
Sbjct: 95 EARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLF-------NLLPYKWNPVCC---- 143
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
NA++A Y K +E +LF+ MP ++LVSWN
Sbjct: 144 ----------------------------NAMVAGYAKNRQFDEARRLFDAMPAKDLVSWN 175
Query: 271 SIICGFSENG 280
S++ G++ NG
Sbjct: 176 SMLTGYTRNG 185
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 239 NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
N++I+ + K + + +LF+ MP+RN+VSWNS+I + N E+ L KM
Sbjct: 50 NSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKM 103
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VF N I GK ++E +K+F+ M +N V+ NS+I F++NG
Sbjct: 15 VFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNG 60
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 19/280 (6%)
Query: 35 RNKHSLRSIFK---EKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENL 91
R KH L S K +K L + +N+ +H T L E L+ AL L N
Sbjct: 3 RTKHVLSSTHKAIFQKPRLLSTFPSNSHHVLNIHIHD--TRLRE--ALLHMALRGLDTNF 58
Query: 92 HNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLD 151
+ + +L C ++ I G+RVH + T + + TRLI Y C D
Sbjct: 59 QDYN------TVLNECLRKRAIREGQRVHAHM-IKTHYLPCVYLRTRLIVFYVKCDSLRD 111
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE-LSSDTELKPDNFTFPCVIKAC 210
+R VFD + RN+ W A++S +++ + LS+FV+ L S TE P+ FTF V+ +C
Sbjct: 112 ARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTE--PNEFTFATVLTSC 169
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
G + G +H K+ V+V ++L+ MY K + E +F+ +PER++VS
Sbjct: 170 IGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCT 229
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+II G+++ G E+ +L ++ EG + +T +VL
Sbjct: 230 AIISGYAQLGLDEEALELFRRLQ--REGMQSNYVTYTSVL 267
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 118/232 (50%), Gaps = 5/232 (2%)
Query: 81 NKALSLLQENLHNA-DLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
++ALSL + L + + E T +L +C +G+++H + + + +
Sbjct: 141 SQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHI-IKLNYEAHVYVGSS 199
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+ MY+ G ++R +F L R++ A++SG+ + L + L +F L + ++
Sbjct: 200 LLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREG-MQS 258
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ T+ V+ A G+A + G VH + + V + N+LI MY KC + ++F
Sbjct: 259 NYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIF 318
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + ER ++SWN+++ G+S++G E +L +M E PD +TV+ VL
Sbjct: 319 DTLHERTVISWNAMLVGYSKHGEGREVLELF-NLMIDENKVKPDSVTVLAVL 369
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
++ GK+VH + S + + ++ LI MYS CG +RR+FD+L R + WNA++
Sbjct: 276 LDHGKQVHNHLLRS-EVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLV 334
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMG 230
G++K+ +VL +F + + ++KPD+ T V+ C GG+ D G + K+
Sbjct: 335 GYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKIS 394
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ D ++ M G+ VE + + MP
Sbjct: 395 VQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMP 426
>gi|297736355|emb|CBI25078.3| unnamed protein product [Vitis vinifera]
Length = 494
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 113/196 (57%), Gaps = 4/196 (2%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
+ KR+H L+ S + ++FI + RL+ +Y+ G SR FD ++ ++++ WN+++S +
Sbjct: 65 LAKRLHALLVVSGKIQSNFI-SIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAY 123
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG-IADVGFGSGVHGMAAKMGLIG 233
+N + + + F +L T+ + D +TFP V+KAC + D+ + +H K GL
Sbjct: 124 VRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLLGDISTATLIHLYVIKHGLEF 183
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
++FVSNALI MY K + + K+F+ M R++VSWNSII + +N + KM
Sbjct: 184 ELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQ 243
Query: 294 GCEEGFIPDVITVVTV 309
G PD++T+V++
Sbjct: 244 --LNGLEPDLLTLVSL 257
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 75/137 (54%), Gaps = 3/137 (2%)
Query: 144 SLCGFPL---DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDN 200
S+ GF + + +VF+ + +++ WN L+SG+T+N L ++ + ++ + E+K +
Sbjct: 272 SVHGFIMRRDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQ 331
Query: 201 FTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV 260
T+ ++ A + + G +HG K L DVFV LI +YGKC + + + LF
Sbjct: 332 GTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQ 391
Query: 261 MPERNLVSWNSIICGFS 277
+P + V WN+II +S
Sbjct: 392 VPRESSVPWNAIISYYS 408
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 75/166 (45%), Gaps = 23/166 (13%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ ++ LI MY+ G D+++VF + R++ WN++++ + +N+ F ++
Sbjct: 184 ELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQ 243
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ L+PD T + D VHG +
Sbjct: 244 LNG-LEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRR---------------------- 280
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEE 297
+ K+F ++P +++VSWN++I G+++NG + E+ ++ M C E
Sbjct: 281 DSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECRE 326
>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25970
gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 701
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 122/229 (53%), Gaps = 12/229 (5%)
Query: 87 LQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC 146
+Q + D+ TG LL AC E+ GK +H +V N LI+MY
Sbjct: 296 MQRHWVETDIYTYTG-LLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNA-LISMY--I 351
Query: 147 GFPL----DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFT 202
FP D+ +F+SLK+++L WN++++GF + L D + F L S +E+K D++
Sbjct: 352 QFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRS-SEIKVDDYA 410
Query: 203 FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF-EVM 261
F ++++C +A + G +H +A K G + + FV ++LI MY KC +E K F ++
Sbjct: 411 FSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQIS 470
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + V+WN++I G++++G S DL +M C + D +T +L
Sbjct: 471 SKHSTVAWNAMILGYAQHGLGQVSLDLFSQM--CNQNVKLDHVTFTAIL 517
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
+D ++ R++ Y GF + +FD + R+ WN ++SG+T D +F +
Sbjct: 33 SDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCM 92
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
D ++F ++K + G VHG+ K G +V+V ++L+ MY KC
Sbjct: 93 KRSGS-DVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCER 151
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGF 276
VE+ + F+ + E N VSWN++I GF
Sbjct: 152 VEDAFEAFKEISEPNSVSWNALIAGF 177
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 2/191 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ K ++G++VH LV N ++ + L+ MY+ C D+ F +
Sbjct: 107 LLKGIASVKRFDLGEQVHGLVIKGGYECNVYV-GSSLVDMYAKCERVEDAFEAFKEISEP 165
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WNAL++GF + + + + D TF ++ V
Sbjct: 166 NSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQV 225
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENGF 281
H K+GL ++ + NA+I+ Y C V + ++F+ + ++L+SWNS+I GFS++
Sbjct: 226 HAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHEL 285
Query: 282 SCESFDLLIKM 292
+F+L I+M
Sbjct: 286 KESAFELFIQM 296
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H A K G I D++VSN ++ Y K F+ LF+ MP+R+ VSWN++I G++ G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 117/221 (52%), Gaps = 17/221 (7%)
Query: 81 NKALSLLQENLHNADLKE---------------ATGVLLQACGHEKDIEIGKRVHELVSA 125
+K +SL ++NLH LK L+ AC + +E G+++H +
Sbjct: 67 DKIISLCKKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHM-L 125
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
+ + D I+ +++MY CG ++R +FDS+ +N+ W +++SG+++ + ++
Sbjct: 126 TCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAIT 185
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
++V++ + PD+FTF ++K+C G+ D +H K D+ NALI+MY
Sbjct: 186 LYVQMLRSGHI-PDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMY 244
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
K + + + + +F + ++L+SW S+I GFS+ G+ E+
Sbjct: 245 TKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEAL 285
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 120/232 (51%), Gaps = 5/232 (2%)
Query: 81 NKALSLLQENLHNADLKE--ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
+ A++L + L + + + G ++++C D ++ +++H V S +F D I
Sbjct: 181 DNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKS-EFGADLIAQNA 239
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI+MY+ D+ VF + ++L W ++++GF++ + L F E+ S + +P
Sbjct: 240 LISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQP 299
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ F F AC + + G +HG+ K GL D+F +L MY KC F+E +F
Sbjct: 300 NEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVF 359
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + +LV+WN+II GF+ + ES +M G +P+ +TV+++L
Sbjct: 360 YHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMR--HTGLVPNDVTVLSLL 409
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + G +VH + F+ D + L++MYS C D+ +VF+ + +
Sbjct: 408 LLCACSEPVMLNHGIQVHSYI-VKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNK 466
Query: 163 -NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ WN L++ + +VL + +L + +KPD+ T V+ + G IA GS
Sbjct: 467 ADIVSWNTLLTACLQQNQAGEVLRL-TKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQ 525
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K GL D+ VSNALI MY KC +E K+F+ + +++SW+S+I G+++ G
Sbjct: 526 IHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGC 585
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F+L M G G P+ IT V +L
Sbjct: 586 GKEAFELFRTMRGL--GVKPNEITFVGIL 612
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 5/211 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G AC + + G+++H L +D L MY+ CGF +R VF ++
Sbjct: 305 GSAFSACSKLLEPDCGRQIHGLC-IKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIE 363
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+L WNA+++GF + S F ++ T L P++ T ++ AC + G
Sbjct: 364 KPDLVAWNAIIAGFASVSNAKESSSFFSQMR-HTGLVPNDVTVLSLLCACSEPVMLNHGI 422
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSEN 279
VH KMG D+ V N+L++MY KC+ + + +++FE + + ++VSWN+++ +
Sbjct: 423 QVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQ 482
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E L M PD +T+ VL
Sbjct: 483 NQAGEVLRLTKLMFASR--IKPDHVTLTNVL 511
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 6/137 (4%)
Query: 176 KNELYTDVLSIF--VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
K L+ + L F + S + LK + T+ +I AC + + G +H
Sbjct: 74 KKNLHREALKAFDIFQKCSSSPLK--SVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQP 131
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
D+ + N +++MYGKC ++E +F+ MP +N+VSW S+I G+S G + L ++M+
Sbjct: 132 DMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQML 191
Query: 294 GCEEGFIPDVITVVTVL 310
G IPD T +++
Sbjct: 192 --RSGHIPDHFTFGSIV 206
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
T VL+ + G E+G ++H + S + D ++ LI MY+ CG +R++FDS+
Sbjct: 508 TNVLVSS-GQIASYEVGSQIHCFIMKSG-LNLDISVSNALINMYTKCGSLECARKMFDSI 565
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
++ W++L+ G+ + + +F + +KP+ TF ++ AC I V G
Sbjct: 566 GNPDIISWSSLIVGYAQAGCGKEAFELFRTMRG-LGVKPNEITFVGILTACSHIGMVEEG 624
>gi|225460139|ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Vitis vinifera]
Length = 725
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 147/301 (48%), Gaps = 29/301 (9%)
Query: 22 KKSQPQFPATVIQRNKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLN 81
+ +Q QF R K + F EK + +S + + + +I + K L
Sbjct: 81 RPTQTQFRT----RLKSPKKKPFSEKDAFPMSLPLHTKNPHAI--FSDIQRFARQGK-LK 133
Query: 82 KALSLLQENLHNADLKEATGV---------LLQACGHEKDIEIGKRVHELVSASTQFSND 132
+AL++L D + G+ LL+AC K + GK++H + + +N+
Sbjct: 134 EALTIL-------DYCDQQGIPVNPTTFSSLLRACVESKSLTHGKQIHVHIRINGLENNE 186
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG--FTKNELYTDVLSIFVEL 190
F+ T+L+ MY+ CG D+R VFD + +++++ WNAL+ G + Y + LS + E+
Sbjct: 187 FL-RTKLVHMYTSCGSLEDARGVFDGVSSKSVYTWNALLRGNVISGRRHYREALSTYSEM 245
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
+ ++ + ++F C+IK+ G G H + K GL+ + +LI MY KC
Sbjct: 246 R-ELGVELNVYSFSCMIKSFAGATAFRQGLKAHALLIKNGLVDSSILRTSLIDMYFKCGK 304
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +FE + ER++V W ++I GF N E+ + L M EG P+ + + T+L
Sbjct: 305 IKLARLMFEEIVERDVVVWGAMIAGFGHNRLQREALEYLRWMR--REGICPNSVIMTTIL 362
Query: 311 P 311
P
Sbjct: 363 P 363
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L G ++G+ VH V + +S I + LI MY CG R+VF + R
Sbjct: 361 ILPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQSALIDMYCKCGDMASGRQVFYASTER 420
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N W AL+SG+ N L + + +PD T V+ C + + G +
Sbjct: 421 NAVSWTALMSGYVSNGRLDQALRSIAWMQQEG-FRPDVVTVATVLPVCAELRALRQGKEI 479
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K G + +V ++ +L+ MY KC ++ KLF+ M RN++SW ++I + ENG
Sbjct: 480 HSYAVKNGFLPNVSIATSLMVMYSKCGNLDYSFKLFDGMDARNVISWTAMIDSYVENGCL 539
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + M + PD + + +L
Sbjct: 540 HEAVGVFRSMQLSKHR--PDSVAMARIL 565
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 4/179 (2%)
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
I+ T LI MY CG +R +F+ + R++ W A+++GF N L + L ++
Sbjct: 290 ILRTSLIDMYFKCGKIKLARLMFEEIVERDVVVWGAMIAGFGHNRLQREALE-YLRWMRR 348
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM-GLIGDVFVSNALIAMYGKCAFVE 252
+ P++ ++ G + G VH K VF+ +ALI MY KC +
Sbjct: 349 EGICPNSVIMTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQSALIDMYCKCGDMA 408
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++F ERN VSW +++ G+ NG ++ + M +EGF PDV+TV TVLP
Sbjct: 409 SGRQVFYASTERNAVSWTALMSGYVSNGRLDQALRSIAWMQ--QEGFRPDVVTVATVLP 465
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 5/229 (2%)
Query: 82 KALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLIT 141
++++ +Q+ D+ VL C + + GK +H + F + I T L+
Sbjct: 443 RSIAWMQQEGFRPDVVTVATVL-PVCAELRALRQGKEIHSY-AVKNGFLPNVSIATSLMV 500
Query: 142 MYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF 201
MYS CG S ++FD + RN+ W A++ + +N + + +F + ++ +PD+
Sbjct: 501 MYSKCGNLDYSFKLFDGMDARNVISWTAMIDSYVENGCLHEAVGVFRSMQL-SKHRPDSV 559
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
++ CG + + G +HG K FVS +I MYGK + + F+ +
Sbjct: 560 AMARILSICGELRVLKLGKEIHGQILKKDFESIPFVSAEIIKMYGKFGAISKAKLAFKAI 619
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
P + ++W +II + N ++ +L +M +GFIP+ T VL
Sbjct: 620 PAKGSMAWTAIIEAYGYNDLYQDAINLFHQMQS--DGFIPNHYTFKAVL 666
>gi|356532922|ref|XP_003535018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Glycine max]
Length = 611
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 111/210 (52%), Gaps = 7/210 (3%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G LL ACG+ + +G+ VH V N F+ + L+ MY CG +R VFD L+
Sbjct: 263 GTLLNACGNLGWLRMGREVHGKVVTLGMKGNVFV-ESSLLDMYGKCGEVGCARVVFDGLE 321
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+N A++ + N VL + E S D ++F +I+AC G+A V G+
Sbjct: 322 EKNEVALTAMLGVYCHNGECGSVLGLVREWRSMV----DVYSFGTIIRACSGLAAVRQGN 377
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH + G DV V +AL+ +Y KC V+ +LF M RNL++WN++I GF++NG
Sbjct: 378 EVHCQYVRRGGWRDVVVESALVDLYAKCGSVDFAYRLFSRMEARNLITWNAMIGGFAQNG 437
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E +L +M+ +EG PD I+ V VL
Sbjct: 438 RGQEGVELFEEMV--KEGVRPDWISFVNVL 465
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 102/190 (53%), Gaps = 2/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC +++ +GK +H +V SN+ ++ LI MY D+R+VFD L
Sbjct: 161 ILKACSQLENLHLGKTLHAVVFIRGFHSNNNVVACALIDMYGRSRVVDDARKVFDELPEP 220
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVEL-SSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+ W A++S +N+ + + + +F + L+ D FTF ++ ACG + + G
Sbjct: 221 DYVCWTAVISTLARNDRFREAVRVFFAMHDGGLGLEVDGFTFGTLLNACGNLGWLRMGRE 280
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VHG +G+ G+VFV ++L+ MYGKC V +F+ + E+N V+ +++ + NG
Sbjct: 281 VHGKVVTLGMKGNVFVESSLLDMYGKCGEVGCARVVFDGLEEKNEVALTAMLGVYCHNG- 339
Query: 282 SCESFDLLIK 291
C S L++
Sbjct: 340 ECGSVLGLVR 349
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 109/234 (46%), Gaps = 3/234 (1%)
Query: 79 SLNKALSLLQENLHNADLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
+L KAL LL+ LK LLQAC +G +H V S ++ F+ N+
Sbjct: 34 ALPKALILLKAQAQAQALKPVVYASLLQACRKAHSFPLGTHLHAHVLKSGFLADRFVANS 93
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L L +R +FD+L +++ W +++SG + + +F+++ ++
Sbjct: 94 LLSLYSKLSPHFSQARALFDALPFKDVIAWTSIISGHVQKAQPKTAVHLFLQMLGQA-IE 152
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL-IGDVFVSNALIAMYGKCAFVEEMVK 256
P+ FT ++KAC + ++ G +H + G + V+ ALI MYG+ V++ K
Sbjct: 153 PNAFTLSSILKACSQLENLHLGKTLHAVVFIRGFHSNNNVVACALIDMYGRSRVVDDARK 212
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ +PE + V W ++I + N E+ + M G D T T+L
Sbjct: 213 VFDELPEPDYVCWTAVISTLARNDRFREAVRVFFAMHDGGLGLEVDGFTFGTLL 266
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 115/210 (54%), Gaps = 10/210 (4%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC +E GK VH + + + ++ L+ MYS CG + +RRVFD L ++
Sbjct: 556 LTACSALHSLEKGKEVHGY-ALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKD 614
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
F ++LVSG+ +N D L +F E+ +L D+FT VI A + + G+ +H
Sbjct: 615 QFSCSSLVSGYAQNGYIEDALLLFHEIRM-ADLWIDSFTVSSVIGAVAILNSLDIGTQLH 673
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
KMGL +V V ++L+ MY KC ++E K+FE + + +L+SW ++I ++++G
Sbjct: 674 ACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQHGKGA 733
Query: 284 ES---FDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +DL+ K EG PD +T V VL
Sbjct: 734 EALKVYDLMRK-----EGTKPDSVTFVGVL 758
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 102/207 (49%), Gaps = 2/207 (0%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L AC G+ V+ L + FSN ++ + LC F D+ RVF +
Sbjct: 151 GSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFE-DALRVFQDVL 209
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
N+ WNA++SG KN L +F ++ P++FTF ++ AC + ++ FG
Sbjct: 210 CENVVCWNAIISGAVKNRENWVALDLFCQMCCRF-FMPNSFTFSSILTACAALEELEFGR 268
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
GV G K G DVFV A+I +Y KC +++ VK F MP RN+VSW +II GF +
Sbjct: 269 GVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKD 328
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVV 307
S +F +M E IT V
Sbjct: 329 DSISAFHFFKEMRKVGEKINNYTITSV 355
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 112/222 (50%), Gaps = 3/222 (1%)
Query: 60 STQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRV 119
ST+ L + + +S S +A+ L Q L L+ + +G+ +
Sbjct: 412 STKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEG-LRPDKFCSSSVLSIIDSLSLGRLI 470
Query: 120 HELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNEL 179
H + F+ D + + L TMYS CG +S VF+ + ++ W ++++GF++++
Sbjct: 471 HCYILKIGLFT-DISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDH 529
Query: 180 YTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSN 239
+ +F E+ + E++PD T + AC + + G VHG A + + +V V
Sbjct: 530 AEQAVQLFREMLLE-EIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGG 588
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
AL+ MY KC + ++F+++P+++ S +S++ G+++NG+
Sbjct: 589 ALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGY 630
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 8/209 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-T 161
+L AC I+ ++H + T F D +++ LI MYS G S RVF ++ T
Sbjct: 355 VLTACTEPVMIKEAVQLHSWI-FKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMEST 413
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+NL W ++S F ++ + +F + + L+PD F V+ I + G
Sbjct: 414 KNLAMWAVMISAFAQSGSTGRAVELFQRMLQEG-LRPDKFCSSSVLSI---IDSLSLGRL 469
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K+GL D+ V ++L MY KC +EE +FE MP+++ VSW S+I GFSE+
Sbjct: 470 IHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDH 529
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ L +M+ E PD +T+ L
Sbjct: 530 AEQAVQLFREML--LEEIRPDQMTLTAAL 556
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 96/193 (49%), Gaps = 5/193 (2%)
Query: 118 RVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKN 177
H L +A Q SN F+ N+ L+ Y + + R+FD N+ WN L+SG +N
Sbjct: 68 HAHFLKTAILQ-SNTFMTNS-LMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQN 125
Query: 178 ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFV 237
+ D F ++ + P+ FT+ V+ AC + +G V+ +A K G + +V
Sbjct: 126 FSFEDSWRNFCKMRF-SGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYV 184
Query: 238 SNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEE 297
+I ++ K E+ +++F+ + N+V WN+II G +N + + DL +M C
Sbjct: 185 RAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQM--CCR 242
Query: 298 GFIPDVITVVTVL 310
F+P+ T ++L
Sbjct: 243 FFMPNSFTFSSIL 255
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 86/171 (50%), Gaps = 6/171 (3%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
++IG ++H V+ + + + + L+TMYS CG + +VF+ ++ +L W A++
Sbjct: 666 LDIGTQLHACVT-KMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIV 724
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGSGVHGMAAKMG 230
+ ++ + L ++ +L KPD+ TF V+ AC G+ + G+ S ++ MA + G
Sbjct: 725 SYAQHGKGAEALKVY-DLMRKEGTKPDSVTFVGVLSACSHNGMVEEGY-SHLNSMAKEYG 782
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENG 280
+ + ++ + G+ ++E + MP E + + W ++ +G
Sbjct: 783 IEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAACKVHG 833
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 109/198 (55%), Gaps = 4/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E+ K++H L+ S D + LI +YS C + D+R VF+ + +++ WNA+
Sbjct: 448 LELSKQIHGLI-IKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFF 506
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G+T++ + L ++ L + KP+ FTF +I A +A + G H KMGL
Sbjct: 507 GYTQHLENEEALKLYSTLQFSRQ-KPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLD 565
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
FV+NAL+ MY KC +EE K+F R++V WNS+I +++G + E+ + +M
Sbjct: 566 FCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREM 625
Query: 293 MGCEEGFIPDVITVVTVL 310
M +EG P+ +T V VL
Sbjct: 626 M--KEGIQPNYVTFVAVL 641
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 107/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + +E GK++H V + ++N LI Y+ C R++FD + +
Sbjct: 236 VLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNV-LIDFYTKCNRVKAGRKLFDQMVVK 294
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W ++SG+ +N + + +F E++ KPD F V+ +CG + G V
Sbjct: 295 NIISWTTMISGYMQNSFDWEAMKLFGEMNR-LGWKPDGFACTSVLTSCGSREALEQGRQV 353
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K L D FV N LI MY K + + K+F+VM E+N++S+N++I G+S
Sbjct: 354 HAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKL 413
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L +M F P ++T V++L
Sbjct: 414 SEALELFHEMR--VRLFPPSLLTFVSLL 439
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 101/177 (57%), Gaps = 2/177 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +CG + +E G++VH + S++F+ N LI MY+ +D+++VFD + +
Sbjct: 337 VLTSCGSREALEQGRQVHAYTIKANLESDEFVKNG-LIDMYAKSNLLIDAKKVFDVMAEQ 395
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ +NA++ G++ E ++ L +F E+ P TF ++ + + +
Sbjct: 396 NVISYNAMIEGYSSQEKLSEALELFHEMRVRL-FPPSLLTFVSLLGVSASLFALELSKQI 454
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
HG+ K G+ D+F +ALI +Y KC++V++ +FE M E+++V WN++ G++++
Sbjct: 455 HGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQH 511
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC +E G ++H V S F D + T LI YS G ++R VFD L +
Sbjct: 135 VIRACTQLGVVEKGAQLHGFVVRSG-FDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEK 193
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
W +++G+TK L +F ++ +T + PD + V+ AC + + G +
Sbjct: 194 TAVTWTTIIAGYTKCGRSAVSLELFAQMR-ETNVVPDRYVVSSVLSACSMLEFLEGGKQI 252
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G DV V N LI Y KC V+ KLF+ M +N++SW ++I G+ +N F
Sbjct: 253 HAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFD 312
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M G+ PD +VL
Sbjct: 313 WEAMKLFGEMNRL--GWKPDGFACTSVL 338
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 3/194 (1%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
K +H + S S+ F+ N LI + S ++R VFD + +NL W+++VS +++
Sbjct: 47 KIIHGQIIVSGLQSDTFLANI-LINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQ 105
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF 236
+ L +FV+L + P+ F VI+AC + V G+ +HG + G DV+
Sbjct: 106 QGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVY 165
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCE 296
V +LI Y K +EE +F+ + E+ V+W +II G+++ G S S +L +M E
Sbjct: 166 VGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMR--E 223
Query: 297 EGFIPDVITVVTVL 310
+PD V +VL
Sbjct: 224 TNVVPDRYVVSSVL 237
>gi|125571124|gb|EAZ12639.1| hypothetical protein OsJ_02552 [Oryza sativa Japonica Group]
Length = 607
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 96/160 (60%), Gaps = 3/160 (1%)
Query: 151 DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
D+ R F +L +N F W A++ +++ L+ L+ + + + + DNF P V+KAC
Sbjct: 121 DAERAFSALPAKNAFAWAAVIGMWSRAGLHGKALAGYAAML-EAGVPADNFVVPNVLKAC 179
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
G+ +G G VHG A K G+ V+V ++L+ YGKC V++ ++F+VMPER +VSWN
Sbjct: 180 AGLGLLGPGRAVHGYAWKAGVGNCVYVMSSLVDFYGKCGEVDDAREVFDVMPERTVVSWN 239
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S++ G+ NG E+ DL +M EG +P ++V++ L
Sbjct: 240 SMLMGYIHNGRIDEAADLFYEMR--VEGVLPTRVSVLSFL 277
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 18/225 (8%)
Query: 85 SLLQENLHNADLKEAT---------GVL------LQACGHEKDIEI--GKRVHELVSAST 127
S+L +HN + EA GVL L D+E+ G R V+ S+
Sbjct: 240 SMLMGYIHNGRIDEAADLFYEMRVEGVLPTRVSVLSFLSASADLEVLDGGRQGHAVAVSS 299
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
D I+ + +I Y G + +F+ + R++ WN ++SG+ ++ L+
Sbjct: 300 GLEMDLILGSSMINFYCKVGLVEAAEVIFEQMVERDIVTWNLMISGYLQDGQTDKALTTC 359
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+ ++ LK D T VI AC + G H A + L D V +LI +Y
Sbjct: 360 HRML-ESGLKFDCVTLASVIMACVKSYRMEVGGAAHAYAVRNNLESDKTVFCSLIELYSS 418
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+E+M ++F+ + R++ +W ++IC ++++G E+ LL +M
Sbjct: 419 SGRIEQMRRVFDSIRRRDIATWKAMICAYADHGMGSEALKLLYQM 463
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC + G+ VH + N + + L+ Y CG D+R VFD + R
Sbjct: 175 VLKACAGLGLLGPGRAVHGY-AWKAGVGNCVYVMSSLVDFYGKCGEVDDAREVFDVMPER 233
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN+++ G+ N + +F E+ + L P + + A + + G
Sbjct: 234 TVVSWNSMLMGYIHNGRIDEAADLFYEMRVEGVL-PTRVSVLSFLSASADLEVLDGGRQG 292
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A GL D+ + +++I Y K VE +FE M ER++V+WN +I G+ ++G +
Sbjct: 293 HAVAVSSGLEMDLILGSSMINFYCKVGLVEAAEVIFEQMVERDIVTWNLMISGYLQDGQT 352
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +M+ E G D +T+ +V+
Sbjct: 353 DKALTTCHRML--ESGLKFDCVTLASVI 378
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL W+ L+SG ++N ++ +V+++ ++ + E P F + A A V +G +
Sbjct: 506 NLRTWSLLISGLSRNGMHPEVMNLCCKMQ-EVEPAPSPTIFSAALLAVKSAASVQYGKAM 564
Query: 223 HGMAAKMGLIGDVFVSNALIAMYG 246
H K GL+ V +L+ MYG
Sbjct: 565 HACIVKKGLLLSKSVVQSLLNMYG 588
>gi|334186610|ref|NP_193380.3| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|223635634|sp|O23491.2|PP315_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g16470
gi|332658358|gb|AEE83758.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 501
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 113/213 (53%), Gaps = 4/213 (1%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
E VLLQ C K+ GKR+H + F+ + + +L+ +Y+L G + +F
Sbjct: 109 ETYAVLLQECKQRKEYTKGKRIHAQMFV-VGFALNEYLKVKLLILYALSGDLQTAGILFR 167
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
SLK R+L WNA++SG+ + L + L I+ ++ + + PD +TF V +AC + +
Sbjct: 168 SLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQN-RIVPDQYTFASVFRACSALDRLE 226
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G H + K + ++ V +AL+ MY KC+ + ++F+ + RN+++W S+I G+
Sbjct: 227 HGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYG 286
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+G E KM EEG P+ +T + VL
Sbjct: 287 YHGKVSEVLKCFEKMK--EEGCRPNPVTFLVVL 317
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 126/253 (49%), Gaps = 12/253 (4%)
Query: 70 ITTLCEESKSLNKALSLLQEN-LHNADLKEAT-GVLLQACGHEKDIEIGKRVHELVSAST 127
+++LC+ + L +AL L+E L + E T +L AC H + + GK +H +
Sbjct: 274 LSSLCQNEQLL-EALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
+ + + L+ MY C L RRVFD + R + WNA+++G+++NE + L +F
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+ + L ++ T V+ AC +HG K GL D FV N L+ MY +
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSR 452
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEE---------G 298
++ +++F M +R+LV+WN++I G+ + ++ LL KM E
Sbjct: 453 LGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS 512
Query: 299 FIPDVITVVTVLP 311
P+ IT++T+LP
Sbjct: 513 LKPNSITLMTILP 525
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 112/218 (51%), Gaps = 13/218 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC + +H V + F+ NT L+ MYS G + R+F ++ R
Sbjct: 411 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT-LMDMYSRLGKIDIAMRIFGKMEDR 469
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVEL----------SSDTELKPDNFTFPCVIKACGG 212
+L WN +++G+ +E + D L + ++ +S LKP++ T ++ +C
Sbjct: 470 DLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAA 529
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
++ + G +H A K L DV V +AL+ MY KC ++ K+F+ +P++N+++WN I
Sbjct: 530 LSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVI 589
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I + +G E+ DLL MM +G P+ +T ++V
Sbjct: 590 IMAYGMHGNGQEAIDLLRMMM--VQGVKPNEVTFISVF 625
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 7/212 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+A +D+E+GK++H V + + L+ +Y CG +VFD + R
Sbjct: 103 LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER 162
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA---DVGFG 219
N WN+L+S E + L F D ++P +FT V+ AC + + G
Sbjct: 163 NQVSWNSLISSLCSFEKWEMALEAF-RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMG 221
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
VH + G + + F+ N L+AMYGK + L R+LV+WN+++ +N
Sbjct: 222 KQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN 280
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ + L +M+ EG PD T+ +VLP
Sbjct: 281 EQLLEALEYLREMV--LEGVEPDEFTISSVLP 310
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
++R+ W L+ ++ L + + +V++ +KPDN+ FP ++KA + D+ G
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIV-LGIKPDNYAFPALLKAVADLQDMELG 116
Query: 220 SGVHGMAAKMGL-IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII---CG 275
+H K G + V V+N L+ +Y KC + K+F+ + ERN VSWNS+I C
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 176
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F + + E+F ++ +E P T+V+V+
Sbjct: 177 FEKWEMALEAFRCML-----DENVEPSSFTLVSVV 206
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 117/221 (52%), Gaps = 17/221 (7%)
Query: 81 NKALSLLQENLHNADLKE---------------ATGVLLQACGHEKDIEIGKRVHELVSA 125
+K +SL ++NLH LK L+ AC + +E G+++H +
Sbjct: 67 DKIISLCKKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHM-L 125
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
+ + D I+ +++MY CG ++R +FDS+ +N+ W +++SG+++ + ++
Sbjct: 126 TCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAIT 185
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
++V++ + PD+FTF ++K+C G+ D +H K D+ NALI+MY
Sbjct: 186 LYVQMLRSGHI-PDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMY 244
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
K + + + + +F + ++L+SW S+I GFS+ G+ E+
Sbjct: 245 TKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEAL 285
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 120/232 (51%), Gaps = 5/232 (2%)
Query: 81 NKALSLLQENLHNADLKE--ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
+ A++L + L + + + G ++++C D ++ +++H V S +F D I
Sbjct: 181 DNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKS-EFGADLIAQNA 239
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI+MY+ D+ VF + ++L W ++++GF++ + L F E+ S + +P
Sbjct: 240 LISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQP 299
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ F F AC + + G +HG+ K GL D+F +L MY KC F+E +F
Sbjct: 300 NEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVF 359
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + +LV+WN+II GF+ + ES +M G +P+ +TV+++L
Sbjct: 360 YHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMR--HTGLVPNDVTVLSLL 409
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + G +VH + F+ D + L++MYS C D+ +VF+ + +
Sbjct: 408 LLCACSEPVMLNHGIQVHSYI-VKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNK 466
Query: 163 -NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ WN L++ + +VL + +L + +KPD+ T V+ + G IA GS
Sbjct: 467 ADIVSWNTLLTACLQQNQAGEVLRL-TKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQ 525
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K GL D+ VSNALI MY KC +E K+F+ + +++SW+S+I G+++ G
Sbjct: 526 IHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGC 585
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F+L M G G P+ IT V +L
Sbjct: 586 GKEAFELFRTMRGL--GVKPNEITFVGIL 612
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 5/211 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G AC + + G+++H L +D L MY+ CGF +R VF ++
Sbjct: 305 GSAFSACSKLLEPDCGRQIHGLC-IKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIE 363
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+L WNA+++GF + S F ++ T L P++ T ++ AC + G
Sbjct: 364 KPDLVAWNAIIAGFASVSNAKESSSFFSQMR-HTGLVPNDVTVLSLLCACSEPVMLNHGI 422
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSEN 279
VH KMG D+ V N+L++MY KC+ + + +++FE + + ++VSWN+++ +
Sbjct: 423 QVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQ 482
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E L M PD +T+ VL
Sbjct: 483 NQAGEVLRLTKLMFASR--IKPDHVTLTNVL 511
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 6/137 (4%)
Query: 176 KNELYTDVLSIF--VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
K L+ + L F + S + LK + T+ +I AC + + G +H
Sbjct: 74 KKNLHREALKAFDIFQKCSSSPLK--SVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQP 131
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
D+ + N +++MYGKC ++E +F+ MP +N+VSW S+I G+S G + L ++M+
Sbjct: 132 DMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQML 191
Query: 294 GCEEGFIPDVITVVTVL 310
G IPD T +++
Sbjct: 192 --RSGHIPDHFTFGSIV 206
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
T VL+ + G E+G ++H + S + D ++ LI MY+ CG +R++FDS+
Sbjct: 508 TNVLVSS-GQIASYEVGSQIHCFIMKSG-LNLDISVSNALINMYTKCGSLECARKMFDSI 565
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
++ W++L+ G+ + + +F + +KP+ TF ++ AC I V G
Sbjct: 566 GNPDIISWSSLIVGYAQAGCGKEAFELFRTMRG-LGVKPNEITFVGILTACSHIGMVEEG 624
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 102/185 (55%), Gaps = 2/185 (1%)
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
S+ D + T ++T YS G +R FD + TRN+ WNA++ + ++ D L
Sbjct: 454 SSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLK 513
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
++ + ++ ++ PD T+ + + C + G + G K+GLI D V NA+I MY
Sbjct: 514 MYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMY 573
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
KC + E K+F+ + ++LVSWN++I G+S++G ++ ++ M+ ++G PD I+
Sbjct: 574 SKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDML--KKGAKPDYIS 631
Query: 306 VVTVL 310
V VL
Sbjct: 632 YVAVL 636
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 93/177 (52%), Gaps = 2/177 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + GK++H V S + ++ + ++ +Y+ CG ++RRVF SL+ RN
Sbjct: 301 LTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASA-MVELYAKCGCFKEARRVFSSLRDRN 359
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
W L+ GF + +++ L +F ++ ++ + D F +I C D+ +H
Sbjct: 360 TVSWTVLIGGFLQYGCFSESLELFNQMRAEL-MTVDQFALATIISGCSNRMDMCLARQLH 418
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
++ K G V +SN+LI+MY KC ++ +F M ER++VSW ++ +S+ G
Sbjct: 419 SLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVG 475
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 31/192 (16%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ I + ++ Y+ G D+ +F + R++ WN L+SG+ ++ + D + FV +
Sbjct: 94 NVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMR 153
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD----------------- 234
+ P+ FTF C +K+CG + + G+ K G GD
Sbjct: 154 RSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAV 213
Query: 235 --------------VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VF N+++A Y K V+ ++LFE MPER++VSWN ++ S++G
Sbjct: 214 DFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSG 273
Query: 281 FSCESFDLLIKM 292
+ E+ + + M
Sbjct: 274 RAREALSVAVDM 285
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 78/138 (56%), Gaps = 1/138 (0%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
+F+S+ R++ WN +VS +++ + LS+ V++ + ++ D+ T+ + AC ++
Sbjct: 250 LFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMH-NRGVRLDSTTYTSSLTACAKLS 308
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+G+G +H + D +V++A++ +Y KC +E ++F + +RN VSW +I
Sbjct: 309 SLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIG 368
Query: 275 GFSENGFSCESFDLLIKM 292
GF + G ES +L +M
Sbjct: 369 GFLQYGCFSESLELFNQM 386
>gi|255543589|ref|XP_002512857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547868|gb|EEF49360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 454
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 119/216 (55%), Gaps = 12/216 (5%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
++AC D+ GK+ H+ + F +D +++ L+ MYS CG D+R +FD + RN
Sbjct: 89 IKACSSLLDLHWGKQTHQQ-ALVFGFESDLFVSSALVDMYSKCGRLSDARILFDEITHRN 147
Query: 164 LFQWNALVSGFTKNELYTDVLSIF----VELSSDTELKP----DNFTFPCVIKACGGIAD 215
+ W ++++G+ +N+ + L +F +E S E K D+ V+ AC I+
Sbjct: 148 IVIWTSMITGYIQNDHAHEALLLFKQFLIEESERNEEKDEVLMDSVAMVSVLSACSRISG 207
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
G GVHG K GL DV + N L+ Y KC V ++F+ + E++ +SWNS+I
Sbjct: 208 KGMTKGVHGFVVKKGLDEDVGIENTLLDAYAKCGEVGVSRQVFDEIVEKDAISWNSMIAV 267
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIP-DVITVVTVL 310
+++NG S E+F++ M+ + G++ + +T+ T+L
Sbjct: 268 YAQNGLSSEAFEVFHGMI--KYGYVKYNAVTLSTLL 301
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 3/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + K VH V D I L+ Y+ CG SR+VFD + +
Sbjct: 198 VLSACSRISGKGMTKGVHGFV-VKKGLDEDVGIENTLLDAYAKCGEVGVSRQVFDEIVEK 256
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN++++ + +N L ++ +F + +K + T ++ AC + G +
Sbjct: 257 DAISWNSMIAVYAQNGLSSEAFEVFHGMIKYGYVKYNAVTLSTLLLACAHSGALQTGKCI 316
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +MGL +V V +LI MY KC V+ K F+ M E+N+ SW +++ G+ +G +
Sbjct: 317 HDQVIRMGLDDNVIVGTSLIDMYCKCGRVQMARKTFDGMKEKNVKSWTAMVAGYGMHGCA 376
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ ++ KM+ G P+ IT V+VL
Sbjct: 377 REALNIFYKMI--RSGVKPNYITFVSVLA 403
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 10/157 (6%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+F WN+L++ ++ + L F + LKP+ TFPC IKAC + D+ +G
Sbjct: 46 NVFSWNSLIADLARSGDSIESLRAFYSMRK-LNLKPNRSTFPCAIKACSSLLDLHWGKQT 104
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A G D+FVS+AL+ MY KC + + LF+ + RN+V W S+I G+ +N +
Sbjct: 105 HQQALVFGFESDLFVSSALVDMYSKCGRLSDARILFDEITHRNIVIWTSMITGYIQNDHA 164
Query: 283 CESFDLLIKMMGCEEG--------FIPDVITVVTVLP 311
E+ LL K EE + D + +V+VL
Sbjct: 165 HEAL-LLFKQFLIEESERNEEKDEVLMDSVAMVSVLS 200
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 107/204 (52%), Gaps = 4/204 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQ+C + G+++H + S D +++T+L+ +Y+ CG +RR+FD + R
Sbjct: 68 ILQSCVASGSLRAGRQLHGRLLVSG-LGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKR 126
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+F WN L+ + + + ++ + + ++PDNFT+P V+KAC + D+ G V
Sbjct: 127 NVFLWNVLIRAYAREGPREAAVRLYRGMV-EHGVEPDNFTYPLVLKACAALLDLETGREV 185
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + DVFV ++ MY KC V++ +F+ + R+ V WNS+I + +NG
Sbjct: 186 HQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRP 245
Query: 283 CESFDLLIKMMGCEEGFIPDVITV 306
E+ L M G P + T+
Sbjct: 246 MEALALCRDM--AANGIGPTIATL 267
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 112/209 (53%), Gaps = 3/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++L+AC D+E G+ VH+ VS T++ D + ++ MY+ CG D+R VFD +
Sbjct: 168 LVLKACAALLDLETGREVHQRVSG-TRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAV 226
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R+ WN++++ + +N + L++ +++++ + P T + A A + G
Sbjct: 227 RDAVVWNSMIAAYGQNGRPMEALALCRDMAANG-IGPTIATLVSAVSAAADAAALPRGRE 285
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG + G + +L+ MY K +V+ LFE + +R LVSWN++ICG+ +G
Sbjct: 286 LHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGH 345
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ L KM G + PD IT V VL
Sbjct: 346 ADEALALFNKMKG-DAQVTPDNITFVGVL 373
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ T L+ MY+ G+ +R +F+ L R L WNA++ G+ + + L++F ++ D
Sbjct: 301 LKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDA 360
Query: 195 ELKPDNFTFPCVIKAC--GGIAD 215
++ PDN TF V+ AC GG+ +
Sbjct: 361 QVTPDNITFVGVLSACNHGGMVE 383
>gi|357440905|ref|XP_003590730.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479778|gb|AES60981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 627
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 111/187 (59%), Gaps = 7/187 (3%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
FS + + TRLI+ Y+ G + S+ VFDS+ T+N++ WN+L++G+ KN + + + +F
Sbjct: 57 FSQNAFLTTRLISAYATFGDSIMSKLVFDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFR 116
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
++ L PD++T + K G I D+ G +HG + ++G + D+ V N++++MY +C
Sbjct: 117 QMGR--CLLPDDYTLATISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRC 174
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF--DL--LIKMMGCEEGFIPDVI 304
+ +K+F+ MP+RN+ S+N II G + G S DL + M C +G+ D
Sbjct: 175 REFGDAMKVFDEMPQRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQC-QGYNADAF 233
Query: 305 TVVTVLP 311
TV ++LP
Sbjct: 234 TVASLLP 240
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 115/223 (51%), Gaps = 6/223 (2%)
Query: 92 HNADLKEATGVLLQACGHEKDIEIGKRVHELV---SASTQFSNDFIINTRLITMYSLCGF 148
+NAD +L C + + G+ +H + + +D + + LI MYS
Sbjct: 228 YNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNK 287
Query: 149 PLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIK 208
+ SRRVFD +K+RN++ W A+++G+ +N L +F E+ ++P+ + V+
Sbjct: 288 LVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRIRPNRVSLVSVLP 347
Query: 209 ACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLV 267
ACG + + G VH + KM + + NALI MY KC ++ ++F+ ++ +
Sbjct: 348 ACGLLVGLMGGKQVHAFSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDNGSYSKDAI 407
Query: 268 SWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+W+SII + +G E+ +M+ ++G PD+ITVV VL
Sbjct: 408 TWSSIISAYGLHGKGQEALTTYYEML--QQGIKPDMITVVGVL 448
>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
Length = 822
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 2/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL +C K + G+++H + S F I+ +L+T YS +D+ + ++
Sbjct: 180 LLSSCTDVKSLAEGRQLHGHI-ISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNIL 238
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ F WN L+S + +N LS + ++ ++PDNFT+P V+KACG D+GFG V
Sbjct: 239 HPFPWNLLISSYVRNGFCQKALSAYKQMVKKG-IRPDNFTYPSVLKACGEELDLGFGKEV 297
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + + V NALI+MYGKC V LF+ +PER+ VSWNS+I ++ G
Sbjct: 298 HESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMW 357
Query: 283 CESFDLLIKM 292
E+F+L M
Sbjct: 358 NEAFELFGSM 367
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 114/244 (46%), Gaps = 39/244 (15%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG E D+ GK VHE ++AS + I++ LI+MY CG +R +FD + R
Sbjct: 281 VLKACGEELDLGFGKEVHESINAS-RIKWSLIVHNALISMYGKCGKVGIARDLFDKIPER 339
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVEL-SSDTELKP----------------------- 198
+ WN+++S + ++ + +F + + D EL
Sbjct: 340 DAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELL 399
Query: 199 ----------DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV-FVSNALIAMYGK 247
D+ + AC I D G +H A + G+V V N+LI MY +
Sbjct: 400 SQMRKXGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIR-SCFGEVDTVKNSLITMYSR 458
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
C ++ LF++M ++L+SWNSII G S E+ LL +M+ G P+ +T+
Sbjct: 459 CKDLKHAYLLFQLMEAKSLISWNSIISGCCHMDRSEEASFLLREML--LSGIEPNYVTIA 516
Query: 308 TVLP 311
+VLP
Sbjct: 517 SVLP 520
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 102/208 (49%), Gaps = 5/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC H D ++GK +H S D + N+ LITMYS C + +F ++ ++
Sbjct: 418 LGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNS-LITMYSRCKDLKHAYLLFQLMEAKS 476
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L WN+++SG + + + E+ + ++P+ T V+ C +A++ G H
Sbjct: 477 LISWNSIISGCCHMDRSEEASFLLREMLL-SGIEPNYVTIASVLPLCARVANLQHGKEFH 535
Query: 224 -GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
M + + + NAL+ MY + V E ++F+++ ER+ +++ S+I G+ G
Sbjct: 536 CYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEG 595
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L +M + PD IT++ VL
Sbjct: 596 QAALKLFEEMNNFQ--IKPDHITMIAVL 621
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 82/173 (47%), Gaps = 3/173 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C +++ GK H ++ F + ++ L+ MY+ G L++RRVFD L R
Sbjct: 518 VLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGER 577
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ + ++++G+ L +F E+ ++ ++KPD+ T V+ AC V G +
Sbjct: 578 DKMTYTSMIAGYGMQGEGQAALKLFEEM-NNFQIKPDHITMIAVLSACSHSGLVTQGQLL 636
Query: 223 -HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS-WNSII 273
M + GL + + ++G+ + + ++ MP + + W ++I
Sbjct: 637 FEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLI 689
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 126/253 (49%), Gaps = 12/253 (4%)
Query: 70 ITTLCEESKSLNKALSLLQEN-LHNADLKEAT-GVLLQACGHEKDIEIGKRVHELVSAST 127
+++LC+ + L +AL L+E L + E T +L AC H + + GK +H +
Sbjct: 274 LSSLCQNEQLL-EALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
+ + + L+ MY C L RRVFD + R + WNA+++G+++NE + L +F
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+ + L ++ T V+ AC +HG K GL D FV N L+ MY +
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSR 452
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEE---------G 298
++ +++F M +R+LV+WN++I G+ + ++ LL KM E
Sbjct: 453 LGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS 512
Query: 299 FIPDVITVVTVLP 311
P+ IT++T+LP
Sbjct: 513 LKPNSITLMTILP 525
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 112/217 (51%), Gaps = 13/217 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC + +H V + F+ NT L+ MYS G + R+F ++ R
Sbjct: 411 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT-LMDMYSRLGKIDIAMRIFGKMEDR 469
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVEL----------SSDTELKPDNFTFPCVIKACGG 212
+L WN +++G+ +E + D L + ++ +S LKP++ T ++ +C
Sbjct: 470 DLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAA 529
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
++ + G +H A K L DV V +AL+ MY KC ++ K+F+ +P++N+++WN I
Sbjct: 530 LSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVI 589
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
I + +G E+ DLL MM +G P+ +T ++V
Sbjct: 590 IMAYGMHGNGQEAIDLLRMMM--VQGVKPNEVTFISV 624
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 7/212 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+A +D+E+GK++H V + + L+ +Y CG +VFD + R
Sbjct: 103 LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER 162
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA---DVGFG 219
N WN+L+S E + L F D ++P +FT V+ AC + + G
Sbjct: 163 NQVSWNSLISSLCSFEKWEMALEAF-RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMG 221
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
VH + G + + F+ N L+AMYGK + L R+LV+WN+++ +N
Sbjct: 222 KQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN 280
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ + L +M+ EG PD T+ +VLP
Sbjct: 281 EQLLEALEYLREMV--LEGVEPDEFTISSVLP 310
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
++R+ W L+ ++ L + + +V++ +KPDN+ FP ++KA + D+ G
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIV-LGIKPDNYAFPALLKAVADLQDMELG 116
Query: 220 SGVHGMAAKMGL-IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII---CG 275
+H K G + V V+N L+ +Y KC + K+F+ + ERN VSWNS+I C
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 176
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F + + E+F ++ +E P T+V+V+
Sbjct: 177 FEKWEMALEAFRCML-----DENVEPSSFTLVSVV 206
>gi|302761274|ref|XP_002964059.1| hypothetical protein SELMODRAFT_81625 [Selaginella moellendorffii]
gi|300167788|gb|EFJ34392.1| hypothetical protein SELMODRAFT_81625 [Selaginella moellendorffii]
Length = 474
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 113/228 (49%), Gaps = 13/228 (5%)
Query: 89 ENLHNADLK-----EATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITM 142
EN +LK E T V +L AC + G+ +HE V + D ++ T LI M
Sbjct: 44 ENFQKMELKLVAPNEVTFVAVLNACADSAALRTGRMIHEYV----RCDPDLVVRTALINM 99
Query: 143 YSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFT 202
Y CG DS RVF ++ +RNL WN + + + + ++ + + +KPD T
Sbjct: 100 YGKCGALEDSERVFYNMSSRNLVSWNTMFGVYADAKCSSQAFRLYQRIQLEG-VKPDGIT 158
Query: 203 FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
F ++ + + G VH AA+ GL DV V+N+L+ MYGKC + + LFE M
Sbjct: 159 FMSLLNSFASEEALEAGKVVHAHAAEAGLEDDVCVANSLLDMYGKCGSLGDTRLLFEKME 218
Query: 263 ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
RN +SW S+I + G E+ + +M+ E +PD +T TVL
Sbjct: 219 LRNFISWTSMITACFKQGKDREALHVYHRML--LEAVVPDRLTFATVL 264
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 106/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL + E+ +E GK VH +A +D + L+ MY CG D+R +F+ ++ R
Sbjct: 162 LLNSFASEEALEAGKVVHAH-AAEAGLEDDVCVANSLLDMYGKCGSLGDTRLLFEKMELR 220
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N W ++++ K + L ++ + + + PD TF V+ AC + + G V
Sbjct: 221 NFISWTSMITACFKQGKDREALHVYHRMLLEA-VVPDRLTFATVLNACASLPSLKDGKAV 279
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + GL ++ + AL++MYGK + E FE+M ER+ +WNS++ ++++G +
Sbjct: 280 HGCVRERGLAIELSLGTALVSMYGKGGSLMEAQAAFELMAERDTAAWNSMLAAYAQHGKA 339
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +M +E PD IT V VL
Sbjct: 340 RGTILAFRRMQ--QEDVKPDAITYVIVL 365
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 12/172 (6%)
Query: 142 MYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK---P 198
M+ CG +R FD ++ + + W AL++ + + Y L F ++ ELK P
Sbjct: 1 MFGKCGDVDAARETFDVVRQKTVISWTALITAYANHGFYDQALENFQKM----ELKLVAP 56
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ TF V+ AC A + G +H + D+ V ALI MYGKC +E+ ++F
Sbjct: 57 NEVTFVAVLNACADSAALRTGRMIH---EYVRCDPDLVVRTALINMYGKCGALEDSERVF 113
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
M RNLVSWN++ +++ S ++F L ++ EG PD IT +++L
Sbjct: 114 YNMSSRNLVSWNTMFGVYADAKCSSQAFRLYQRIQ--LEGVKPDGITFMSLL 163
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 72/158 (45%), Gaps = 5/158 (3%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L AC ++ GK VH V + + + T L++MY G ++++ F+ +
Sbjct: 261 ATVLNACASLPSLKDGKAVHGCVR-ERGLAIELSLGTALVSMYGKGGSLMEAQAAFELMA 319
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGF 218
R+ WN++++ + ++ + F + + ++KPD T+ V+ AC G+ +
Sbjct: 320 ERDTAAWNSMLAAYAQHGKARGTILAFRRMQQE-DVKPDAITYVIVLSACRHAGLLEEAL 378
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
M + GL+ +LI + G+ +EE K
Sbjct: 379 -ECFTSMTREHGLLPTSEHYGSLIDLVGRTGRLEEAEK 415
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 116/222 (52%), Gaps = 9/222 (4%)
Query: 94 ADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSR 153
ADL+E T LLQ+C D+ GKR HEL+ A+ + LI MY CG ++
Sbjct: 23 ADLQEYTA-LLQSCVDSNDLAKGKRAHELI-ANAGLEQHLFLGNCLINMYVRCGSLEEAH 80
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
+F ++ RN+ W AL+S ++ + ++F + ++ P+++T ++ AC
Sbjct: 81 AIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANS 140
Query: 214 ADVGFGSGVHGMAAKMGLIGD----VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSW 269
D+ G +H M ++GL + V NA+I MY KC E+ + +F +PE+++VSW
Sbjct: 141 RDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSW 200
Query: 270 NSIICGFS-ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ ++ E F ++ + +M+ + P+VIT +T L
Sbjct: 201 TAMAGAYAQERRFYPDALRIFREML--LQPLAPNVITFITAL 240
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L C + +GK +H V+ D + L+ MYS CG ++ F+++K R+
Sbjct: 645 LDTCLDSTTLGLGKIIHACVT-EIGLEADIAVENALLNMYSNCGDWREALSFFETMKARD 703
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L WN + + + + L + + +F + + +KPD TF + GG A V G H
Sbjct: 704 LVSWNIMSAAYAQAGLAKEAVLLFRHMQLEG-VKPDKLTFSTTLNVSGGSALVSDGKLFH 762
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G+AA+ GL DV V+ L+ +Y KC ++E + LF + +V N+II +++GFS
Sbjct: 763 GLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSE 822
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + KM +EG PDV T+V+++
Sbjct: 823 EAVKMFWKMQ--QEGVRPDVATLVSII 847
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 13/216 (6%)
Query: 102 VLLQACGHEKDIEIGKRVHELV---SASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
+L AC + +D+ IG+ +H ++ + + ++ +I MY+ CG P D+ VF +
Sbjct: 132 AMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLT 191
Query: 159 LKTRNLFQWNALVSGFTK-NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
+ +++ W A+ + + Y D L IF E+ L P+ TF + AC + D
Sbjct: 192 IPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQP-LAPNVITFITALGACTSLRD-- 248
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER---NLVSWNSIIC 274
G+ +H + + GL D NALI MYGKC E +F+ M R +LVSWN++I
Sbjct: 249 -GTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMIS 307
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E G ++ + ++ EG P+ +T++T+L
Sbjct: 308 ASVEAGRHGDAMAIFRRLR--LEGMRPNSVTLITIL 341
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 3/176 (1%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ T LI+M+ C +R VFD + ++ W A+VS +N + +V +F + +
Sbjct: 574 LETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEG 633
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+ PD FT + C +G G +H ++GL D+ V NAL+ MY C E
Sbjct: 634 VI-PDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREA 692
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ FE M R+LVSWN + +++ G + E+ LL + M EG PD +T T L
Sbjct: 693 LSFFETMKARDLVSWNIMSAAYAQAGLAKEAV-LLFRHMQL-EGVKPDKLTFSTTL 746
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 17/215 (7%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS--L 159
+L AC + + ++ G+++H L+ + + + T L++MY CG ++ VF L
Sbjct: 442 AILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPL 501
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+R+L WN ++ + +N+ + +E+ L PD +F V+ +C
Sbjct: 502 PSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVL-PDALSFTSVLSSC--------Y 552
Query: 220 SGVHGMAAKMGLIGDVFVS----NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
+M ++ + S ALI+M+G+C +E+ +F+ M ++VSW +++
Sbjct: 553 CSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSA 612
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+EN E L +M EG IPD T+ T L
Sbjct: 613 TAENRDFKEVHHLFRRMQ--LEGVIPDKFTLATTL 645
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 11/181 (6%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR- 162
L AC +D G +H L+ + D + LI MY CG + VF ++ +R
Sbjct: 240 LGACTSLRD---GTWLHSLLHEAG-LGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQ 295
Query: 163 --NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA-DVGFG 219
+L WNA++S + + D ++IF L + ++P++ T ++ A D G
Sbjct: 296 ELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEG-MRPNSVTLITILNALAASGVDFGAA 354
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSE 278
HG + G + DV V NA+I+MY KC F +F + + +++SWN+++ G SE
Sbjct: 355 RKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTML-GASE 413
Query: 279 N 279
+
Sbjct: 414 D 414
>gi|225460143|ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Vitis vinifera]
Length = 748
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 2/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL +C K + G+++H + S F I+ +L+T YS +D+ + ++
Sbjct: 106 LLSSCTDVKSLAEGRQLHGHI-ISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNIL 164
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ F WN L+S + +N LS + ++ ++PDNFT+P V+KACG D+GFG V
Sbjct: 165 HPFPWNLLISSYVRNGFCQKALSAYKQMVKKG-IRPDNFTYPSVLKACGEELDLGFGKEV 223
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + + V NALI+MYGKC V LF+ +PER+ VSWNS+I ++ G
Sbjct: 224 HESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMW 283
Query: 283 CESFDLLIKM 292
E+F+L M
Sbjct: 284 NEAFELFGSM 293
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 114/244 (46%), Gaps = 39/244 (15%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG E D+ GK VHE ++AS + I++ LI+MY CG +R +FD + R
Sbjct: 207 VLKACGEELDLGFGKEVHESINAS-RIKWSLIVHNALISMYGKCGKVGIARDLFDKIPER 265
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVEL-SSDTELKP----------------------- 198
+ WN+++S + ++ + +F + + D EL
Sbjct: 266 DAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELL 325
Query: 199 ----------DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV-FVSNALIAMYGK 247
D+ + AC I D G +H A + G+V V NALI MY +
Sbjct: 326 SQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIR-SCFGEVDTVKNALITMYSR 384
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
C ++ LF++M ++L++WNSII G S E+ LL +M+ G P+ +T+
Sbjct: 385 CKDLKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLF--GIEPNYVTIA 442
Query: 308 TVLP 311
+VLP
Sbjct: 443 SVLP 446
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 5/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC H D ++GK +H S D + N LITMYS C + +F ++ ++
Sbjct: 344 LGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNA-LITMYSRCKDLKHAYLLFQLMEAKS 402
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L WN+++SG + + + E+ ++P+ T V+ C +A++ G H
Sbjct: 403 LITWNSIISGCCHMDRSEEASFLLREMLL-FGIEPNYVTIASVLPLCARVANLQHGKEFH 461
Query: 224 -GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
M + + + NAL+ MY + V E ++F+++ ER+ +++ S+I G+ G
Sbjct: 462 CYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEG 521
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L +M + PD IT++ VL
Sbjct: 522 QAALKLFEEMNNFQ--IKPDHITMIAVL 547
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 82/173 (47%), Gaps = 3/173 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C +++ GK H ++ F + ++ L+ MY+ G L++RRVFD L R
Sbjct: 444 VLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGER 503
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ + ++++G+ L +F E+ ++ ++KPD+ T V+ AC V G +
Sbjct: 504 DKMTYTSMIAGYGMQGEGQAALKLFEEM-NNFQIKPDHITMIAVLSACSHSGLVTQGQLL 562
Query: 223 -HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS-WNSII 273
M + GL + + ++G+ + + ++ MP + + W ++I
Sbjct: 563 FEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLI 615
>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC + +G VH V S SN F+ L+T Y+ P +R+VFD + R
Sbjct: 114 VIKACADLSLLRLGTIVHSHVFVSGYASNSFV-QAALVTFYAKSCTPRVARKVFDEMPQR 172
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+++SG+ +N L ++ + +F ++ ++ +PD+ TF V+ AC + + G +
Sbjct: 173 SIIAWNSMISGYEQNGLASEAVEVFNKMR-ESGGEPDSATFVSVLSACSQLGSLDLGCWL 231
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G+ +V ++ +L+ M+ +C V +F+ M E N+VSW ++I G+ +G+
Sbjct: 232 HECIVGTGIRMNVVLATSLVNMFSRCGDVGRARAVFDSMNEGNVVSWTAMISGYGMHGYG 291
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ ++ +M C G +P+ +T V VL
Sbjct: 292 VEAMEVFHRMKAC--GVVPNRVTYVAVL 317
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 3/174 (1%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
T+L+T+ G +RR+F S+ + F +N+L+ + D + F + +
Sbjct: 46 TKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSNFGFSLDAV-FFYRRMLHSRI 104
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
P +TF VIKAC ++ + G+ VH G + FV AL+ Y K K
Sbjct: 105 VPSTYTFTSVIKACADLSLLRLGTIVHSHVFVSGYASNSFVQAALVTFYAKSCTPRVARK 164
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ MP+R++++WNS+I G+ +NG + E+ ++ KM E G PD T V+VL
Sbjct: 165 VFDEMPQRSIIAWNSMISGYEQNGLASEAVEVFNKMR--ESGGEPDSATFVSVL 216
>gi|255580465|ref|XP_002531058.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529353|gb|EEF31319.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 341
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 109/199 (54%), Gaps = 4/199 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+A ++ +G+++H +S F + + L+ MY+ CG + ++F+ + R
Sbjct: 146 LLKAVSKMVNVRVGEKIHS-ISIRNGFESLVFVQNSLMHMYAACGQYESAHKLFEFMPDR 204
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN +SGF N + L +++E+ + ++PD FT ++ AC + + G +
Sbjct: 205 DLVAWNTAISGFALNGKPNEALKLYMEMGLEG-VEPDGFTLVSLLSACAELGALALGRRI 263
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K+GL ++ +N+LI +Y KC + + ++F+ M RN+VSW S+I G + NGF
Sbjct: 264 HAYMVKVGLDENLHANNSLIDLYAKCGRIRDAQQVFDEMELRNVVSWTSLIVGLAVNGFG 323
Query: 283 CESFDLLIKMMGCEEGFIP 301
E+ + +M ++G +P
Sbjct: 324 MEAIEHFKEME--KQGLVP 340
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 91/159 (57%), Gaps = 3/159 (1%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+ +F ++ N+F WN ++ G ++E + ++ L ++ ++PD T+P ++KA
Sbjct: 93 AHNIFTLIQNPNIFTWNTMIRGHAESENPKPAIELYHRLHFNS-IEPDTHTYPFLLKAVS 151
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
+ +V G +H ++ + G VFV N+L+ MY C E KLFE MP+R+LV+WN+
Sbjct: 152 KMVNVRVGEKIHSISIRNGFESLVFVQNSLMHMYAACGQYESAHKLFEFMPDRDLVAWNT 211
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I GF+ NG E+ L ++M EG PD T+V++L
Sbjct: 212 AISGFALNGKPNEALKLYMEM--GLEGVEPDGFTLVSLL 248
>gi|116312013|emb|CAJ86370.1| OSIGBa0117N13.14 [Oryza sativa Indica Group]
gi|116312056|emb|CAJ86420.1| H0303G06.9 [Oryza sativa Indica Group]
Length = 559
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ C GK VH V+A++ D ++T+LI Y+ G +R++FD + R
Sbjct: 17 LLQCCISSCAFRQGKSVHGRVAAASASPPDLHLSTKLIIFYARFGDVAAARKMFDGMPHR 76
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W A+VSG+ +N + L +F L + +P+ FT+ AC G G V
Sbjct: 77 SVVSWTAMVSGYARNGRPREALELFA-LMRASGARPNQFTYGSAASACAGAGCARSGEQV 135
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H AAK GD+FV +AL+ M+ +C VE+ +LF M ++++VSWN++I GF E G
Sbjct: 136 HACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVVSWNALIRGFVERGHD 195
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L M+ +E IPD T+ + L
Sbjct: 196 GDALGLFSSML--KEAMIPDHYTLGSAL 221
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 117/251 (46%), Gaps = 26/251 (10%)
Query: 79 SLNKALSLLQENLHNAD--------LKEAT-------GVLLQACG---HEKDIEIGKRVH 120
S N + E H+ D LKEA G L+ACG ++E+ +H
Sbjct: 181 SWNALIRGFVERGHDGDALGLFSSMLKEAMIPDHYTLGSALKACGIVGVAVNVEL---IH 237
Query: 121 ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELY 180
+ + +I + LI Y+ C +R ++DS+ +L AL+SG+T + Y
Sbjct: 238 SCIIKLGYWDEKVVIGS-LINSYAKCRSMSSARVIYDSISEPDLVSSTALISGYTMDRNY 296
Query: 181 T-DVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSN 239
+ D + +F ++ L D V+ C +A FG+ +H K +GD+ + N
Sbjct: 297 SEDAMELFCKIHRKG-LWIDGVLLSSVLCLCASVASARFGTQIHAYMCKKQSMGDIALDN 355
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
AL+ MY K + + F+ MP RN++SW S+I NG ++ L +M+ E+G
Sbjct: 356 ALVDMYAKAGEFSDAKRAFDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMV--EDGV 413
Query: 300 IPDVITVVTVL 310
P+ +T +++L
Sbjct: 414 RPNDVTFLSLL 424
>gi|302801760|ref|XP_002982636.1| hypothetical protein SELMODRAFT_116842 [Selaginella moellendorffii]
gi|300149735|gb|EFJ16389.1| hypothetical protein SELMODRAFT_116842 [Selaginella moellendorffii]
Length = 567
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 108/212 (50%), Gaps = 7/212 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL--K 160
LL+ CG + +E G+RVH + ++ Q N F+ N L+ MY CG ++RR FD +
Sbjct: 55 LLRRCGRARALEDGRRVHAHIVSTGQSQNPFLGNL-LVQMYGKCGSLGEARRAFDGIPES 113
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL--KPDNFTFPCVIKACGGIADVGF 218
RN++ W ++S + ++ + + +F + + K D V+ +C D+
Sbjct: 114 KRNVYSWGLMISAYAQSGHHKQAIDLFQTMQETKTMVVKADCVILASVLGSCAASGDLQT 173
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G +H + L ++ V AL+ MY KC V E F+ M ER+++SWN+++ +++
Sbjct: 174 GKAIHEKISSGCLDSNLVVETALLDMYAKCGKVAEARGTFDRMKERDVISWNAMLAAYAQ 233
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + + +L M C EG PD T T++
Sbjct: 234 TGHNTHAINLYHGM--CCEGVFPDEFTFSTIV 263
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 12/208 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +C D++ GK +HE +S+ SN ++ T L+ MY+ CG ++R FD +K R
Sbjct: 161 VLGSCAASGDLQTGKAIHEKISSGCLDSN-LVVETALLDMYAKCGKVAEARGTFDRMKER 219
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA+++ + + T ++++ + + PD FTF ++ +C + + V
Sbjct: 220 DVISWNAMLAAYAQTGHNTHAINLYHGMCCEGVF-PDEFTFSTIVTSCSSLRLLNL---V 275
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + + G+ D + LI Y K +EE ++F R+ V WN++I G +
Sbjct: 276 HAVIVESGMQHDDGIYCGLIKSYAKLNQIEESERIF-----RDPVYWNALIAAHGLYGHT 330
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
L M EG PD +T +VL
Sbjct: 331 PRVLRLFSAMQ--LEGLAPDEVTFTSVL 356
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 67/160 (41%), Gaps = 10/160 (6%)
Query: 119 VHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNE 178
VH ++ S +D I LI Y+ +S R+F R+ WNAL++
Sbjct: 275 VHAVIVESGMQHDDGIY-CGLIKSYAKLNQIEESERIF-----RDPVYWNALIAAHGLYG 328
Query: 179 LYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV-HGMAAKMGLIGDVFV 237
VL +F + + L PD TF V+ CG G GV M + G+ +
Sbjct: 329 HTPRVLRLFSAMQLEG-LAPDEVTFTSVLATCGRSRVARCGRGVFQAMISDYGMRPSLAH 387
Query: 238 SNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGF 276
LI ++G+ + +L E M E V W S++ GF
Sbjct: 388 YRCLIHLFGRGGHLGAAKELIESMEYEPGDVEWTSLL-GF 426
>gi|297823557|ref|XP_002879661.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325500|gb|EFH55920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 500
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 114/207 (55%), Gaps = 3/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+++CG +D G H L + F +D + + L+ +Y G ++ +VF + N
Sbjct: 127 VRSCGSNRDFRTGSGFHCL-ALKGGFISDVYLGSSLVVLYRDSGEVENAHKVFAEMPDNN 185
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W A++SGF + + ++ E+ + T P+++TF ++ AC G +G G VH
Sbjct: 186 VVSWTAMISGFAQEWRVDICMKLYSEMRNSTS-DPNDYTFTALLSACTGSGALGQGRSVH 244
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+MGL + +SN+LI+MY KC +++ ++F+ +++VSWNS+I G+++ G +
Sbjct: 245 CQTLQMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQYGLAT 304
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L MM + G PD IT + +L
Sbjct: 305 QAIELFELMMP-KSGIKPDAITYLGLL 330
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 10/201 (4%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL AC + G+ VH + + I+ LI+MY CG D+ R+FD
Sbjct: 226 ALLSACTGSGALGQGRSVH-CQTLQMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSN 284
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+++ WN++++G+ + L T + +F + + +KPD T+ ++ +C V G
Sbjct: 285 KDVVSWNSMIAGYAQYGLATQAIELFELMMPKSGIKPDAITYLGLLSSCRHAGLVIEGRK 344
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSENG 280
+ A+ GL ++ + L+ + G+ ++E ++L E MP + N V W S++
Sbjct: 345 FFNLMAERGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL------- 397
Query: 281 FSCESF-DLLIKMMGCEEGFI 300
FSC D+ + + EE I
Sbjct: 398 FSCRVHGDVWMGIRAAEERLI 418
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 6/109 (5%)
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPC-----VIKACGGIADVGFGSGVHGMAAKM 229
TKN + + + + +E SS + +K D ++F +++CG D GSG H +A K
Sbjct: 91 TKNGVSSVLEEVMLEDSS-SSVKRDGWSFDAYGLSSAVRSCGSNRDFRTGSGFHCLALKG 149
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G I DV++ ++L+ +Y VE K+F MP+ N+VSW ++I GF++
Sbjct: 150 GFISDVYLGSSLVVLYRDSGEVENAHKVFAEMPDNNVVSWTAMISGFAQ 198
>gi|87240913|gb|ABD32771.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 497
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 133/310 (42%), Gaps = 43/310 (13%)
Query: 8 SACLWSPLF-PSLRQKKSQPQFPATVIQRNKHSLRSIFKEKSSLSLSAKTNNASTQGLHF 66
+ C+ +P P ++ Q P+T N + + +LSL K N S Q + +
Sbjct: 4 TTCIATPTHHPDPPKQPPQIHPPSTFSPPNNPN------KNQTLSLKHKPN--SNQTVSW 55
Query: 67 LQEITTLCEESKSLNKALSLLQENLHNADLKEATGV-LLQACGH---EKDIEIGKRVHEL 122
I+ C+ + L A +Q + T + LL AC H + I G +H
Sbjct: 56 TSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPSKTSITFGAALHTH 115
Query: 123 VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTD 182
ND ++ T LI MY+ CG +R VFD + RNL WN ++ G+ KN D
Sbjct: 116 AFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGDVDD 175
Query: 183 VLSIFVELSSDTELK------------------------------PDNFTFPCVIKACGG 212
L +F +L + PD T +I AC
Sbjct: 176 ALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAIISACAN 235
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
+ +G G VH + K +V V N+LI MY +C +E ++F+ M +RNLVSWNSI
Sbjct: 236 LGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGMSQRNLVSWNSI 295
Query: 273 ICGFSENGFS 282
I GF+ NG +
Sbjct: 296 IVGFAVNGLA 305
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG---GIADVGFGSGVH 223
W + +S KN + S F+++ + E++P++ T ++ AC + FG+ +H
Sbjct: 55 WTSSISHHCKNNNFLKAASEFIQML-EAEVEPNHITLITLLSACAHSPSKTSITFGAALH 113
Query: 224 GMAAKMGL-IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
A K G + DV V ALI MY KC ++ +F+ M RNLVSWN++I G+ +NG
Sbjct: 114 THAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGDV 173
Query: 283 CESFDLLIKM 292
++ L K+
Sbjct: 174 DDALKLFDKL 183
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC + + +G VH LV +F ++ + LI MY+ CG +R+VFD + R
Sbjct: 229 IISACANLGALGLGLWVHRLV-MKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGMSQR 287
Query: 163 NLFQWNALVSGFTKNELYTDVLSIF 187
NL WN+++ GF N L LS F
Sbjct: 288 NLVSWNSIIVGFAVNGLADKALSFF 312
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 122/230 (53%), Gaps = 6/230 (2%)
Query: 83 ALSLLQE-NLHNADLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLI 140
A+ + +E L N + + T G +L ACG ++ GK+VH + T + ++ + + L+
Sbjct: 259 AIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYI-IRTDYKDNIFVASALV 317
Query: 141 TMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDN 200
MY C + VF + +N+ W A++ G+ +N + + F ++ ++PD+
Sbjct: 318 DMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQK-YGIEPDD 376
Query: 201 FTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV 260
FT VI +C +A + G+ H A GLI + VSNAL+ +YGKC +E+ +LF
Sbjct: 377 FTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNE 436
Query: 261 MPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ V+W +++ G+++ G + E+ L M+ G PD +T + VL
Sbjct: 437 ISFKDEVTWTALVSGYAQFGKANETIGLFESMLA--HGLKPDKVTFIGVL 484
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 100/179 (55%), Gaps = 3/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ ++ LI CG DS+R+F ++ R+ W ++++GFT+N L D + IF E+
Sbjct: 208 NVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMK 267
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ L+ D +TF V+ ACGG+ + G VH + ++FV++AL+ MY KC +
Sbjct: 268 LEN-LQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNI 326
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +F+ M +N+VSW +++ G+ +NG+S E+ M + G PD T+ +V+
Sbjct: 327 KSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQ--KYGIEPDDFTLGSVI 383
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNEL-YTDVLSIFVELSSDTELK 197
+++ YS G + +FD++ R+ WN+L+SG+ L Y V + + L +D
Sbjct: 81 ILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFN 140
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
+ TF ++ V G +HG K G + VFV + L+ MY K + K+
Sbjct: 141 LNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKV 200
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
F+ +PE+N+V +N++I G G +S L +M
Sbjct: 201 FDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEM 235
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 98/254 (38%), Gaps = 64/254 (25%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL+ C + K +H + + + F++N LI+ Y+ G + +VFD +
Sbjct: 14 ALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNN-LISSYAKLGSIPYACKVFDQMPH 72
Query: 162 RNLFQWNALVSGFTK----------------------NEL----------YTDVLSIFVE 189
NL+ WN ++S ++K N L Y V + +
Sbjct: 73 PNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLM 132
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK-- 247
L +D + TF ++ V G +HG K G + VFV + L+ MY K
Sbjct: 133 LKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMG 192
Query: 248 -----------------------------CAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
C VE+ +LF M ER+ +SW S+I GF++
Sbjct: 193 MISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQ 252
Query: 279 NGFSCESFDLLIKM 292
NG ++ D+ +M
Sbjct: 253 NGLDRDAIDIFREM 266
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 8/184 (4%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFI-INTRLITMYSLCGFPLDSRRVFDSL 159
G ++ +C + +E G + H S S FI ++ L+T+Y CG DS R+F+ +
Sbjct: 380 GSVISSCANLASLEEGAQFHARALTSGLIS--FITVSNALVTLYGKCGSIEDSHRLFNEI 437
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
++ W ALVSG+ + + + +F + + LKPD TF V+ AC V G
Sbjct: 438 SFKDEVTWTALVSGYAQFGKANETIGLFESMLAHG-LKPDKVTFIGVLSACSRAGLVEKG 496
Query: 220 SGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII--CG 275
+ + M + G++ +I ++ + +EE MP + +SW +++ C
Sbjct: 497 NQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCR 556
Query: 276 FSEN 279
F N
Sbjct: 557 FYGN 560
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF---SCESFDLLI 290
+++ N +++ Y K V EM LF+ MP R+ VSWNS+I G++ G S ++++L++
Sbjct: 74 NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 133
Query: 291 KMMGCEEGFIPDVITVVTVL 310
K G F + IT T+L
Sbjct: 134 KNDG---SFNLNRITFSTLL 150
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 104/189 (55%), Gaps = 1/189 (0%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L C + G+ +H+ + AS + D ++ L+ MY C +++R+VF+ +K RN
Sbjct: 138 LGGCASVAGLADGRAIHQRILAS-KVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARN 196
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ + A++S + + + + L +F +S ++P+ +TF ++ A G+ ++ G VH
Sbjct: 197 VRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVH 256
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
A G +V V NAL+ MYGKC E K+F+ M RN++SW S+I ++++G
Sbjct: 257 RHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQ 316
Query: 284 ESFDLLIKM 292
E+ +L +M
Sbjct: 317 EALNLFKRM 325
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 109/199 (54%), Gaps = 8/199 (4%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
++E G++VH + AS F + ++ L+TMY CG P+++R+VFDS+ RN+ W +++
Sbjct: 248 NLEKGRKVHRHL-ASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMI 306
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
+ + ++ + L++F + +++P +F + AC + + G +H + L
Sbjct: 307 AAYAQHGNPQEALNLFKRM----DVEPSGVSFSSALNACALLGALDEGREIHHRVVEANL 362
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
+ +L++MY +C +++ ++F M R+ S N++I F+++G ++ + K
Sbjct: 363 ASPQ-METSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRK 421
Query: 292 MMGCEEGFIPDVITVVTVL 310
M +EG D IT V+VL
Sbjct: 422 ME--QEGIPADGITFVSVL 438
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 110/208 (52%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ AC + +E G+R+HE + T F D + T L+ MY+ CG D++RVF+ ++ +
Sbjct: 36 LVAACTKLQALEEGRRLHEHLII-TGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIK 94
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+LF W+++++ + + + ++ + ++ ++P+ TF C + C +A + G +
Sbjct: 95 DLFAWSSIIAAYARAGRGEMAVVLYRRMIAEG-VEPNVVTFACALGGCASVAGLADGRAI 153
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + D + ++L+ MY KC + E K+FE M RN+ S+ ++I + + G
Sbjct: 154 HQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEH 213
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L +M E P+ T T+L
Sbjct: 214 AEALELFSRMSKV-EAIEPNAYTFATIL 240
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 89/179 (49%), Gaps = 5/179 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC ++ G+ +H V + S + T L++MY+ CG D+RRVF+ +KTR+
Sbjct: 338 LNACALLGALDEGREIHHRVVEANLASPQ--METSLLSMYARCGSLDDARRVFNRMKTRD 395
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG-V 222
F NA+++ FT++ L I+ ++ + + D TF V+ AC + V +
Sbjct: 396 AFSCNAMIAAFTQHGRKKQALRIYRKMEQEG-IPADGITFVSVLVACSHTSLVADCRDFL 454
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENG 280
+ G++ V ++ + G+ + + +L E MP + + V+W +++ G +G
Sbjct: 455 QSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHG 513
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D F ++ AC + + G +H G D+ + AL+ MY KC +++ ++F
Sbjct: 29 DKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVF 88
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E M ++L +W+SII ++ G + L +M+ EG P+V+T L
Sbjct: 89 EGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIA--EGVEPNVVTFACAL 138
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 2/185 (1%)
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
S+ D + T +IT YS G + +R FD + TRN WNA++ + ++ D L
Sbjct: 420 SSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLK 479
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
++ + S ++ PD T+ + + C I G + G K GLI +V V+NA I MY
Sbjct: 480 MYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMY 539
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
KC + E KLF+++ +++VSWN++I G+S++G ++ M+ +G PD I+
Sbjct: 540 SKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDML--SKGAKPDYIS 597
Query: 306 VVTVL 310
V VL
Sbjct: 598 YVAVL 602
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 6/208 (2%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVL---LQACGHEKDIEIGKRVHELVSASTQFSND 132
+S + +AL L+ E +H ++ + L AC + GK++H V S +
Sbjct: 237 QSGRVREALGLVVE-MHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 295
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
++ + LI +Y+ CG +++RVF+SL+ RN W L+ G + E ++ + +F ++ +
Sbjct: 296 YVASA-LIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRA 354
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ + D F +I C D+ G +H + K G + VSN+LI++Y KC ++
Sbjct: 355 EL-MAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQ 413
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENG 280
+F M ER++VSW S+I +S+ G
Sbjct: 414 NAEFVFSSMSERDIVSWTSMITAYSQIG 441
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
F+ + R++ WN +++ +++ + L + VE+ ++ D+ T+ + AC +
Sbjct: 217 FEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKG-VRLDSTTYTSSLTACARLFS 275
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
+G+G +H + D +V++ALI +Y KC +E ++F + +RN VSW +I G
Sbjct: 276 LGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGG 335
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 97/234 (41%), Gaps = 38/234 (16%)
Query: 96 LKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV 155
+ +A L++CG + + +H + S F+ NT L+ Y CG D+RR+
Sbjct: 19 VTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNT-LLHAYLSCGALSDARRL 77
Query: 156 FDS-LKTRNLFQWNALVSGFTKNELYTDVLSIF-----VELSSDTELKPDNFTFPCVIKA 209
+ +K N+ N +++G+ K +D +F +++S L D +
Sbjct: 78 LRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMS 137
Query: 210 CGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV------------------ 251
CG + + G+ K GD V AL+ M+ +C +V
Sbjct: 138 CGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCR 197
Query: 252 -------------EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ ++ FE M ER++VSWN +I S++G E+ L+++M
Sbjct: 198 NSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEM 251
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 103/179 (57%), Gaps = 2/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I+ T +++ Y G + F ++ RNL WNA+V+G+ KN D L +F +
Sbjct: 170 DAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMV 229
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
D+ ++P+ T V+ C ++ +GFG VH K+ L +V V +L++MY KC +
Sbjct: 230 EDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDL 289
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ K+F+ M +++V+WN++I G++++G ++ L KM +EG +PD IT++ VL
Sbjct: 290 NDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMK--DEGVVPDWITLLAVL 346
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + L++ + CG +RRVF ++ +++ WN +VSG +KN + ++F
Sbjct: 76 DTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMF---- 131
Query: 192 SDTELKP--DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
+ P + ++ ++ A D+G + A + D + A+++ Y
Sbjct: 132 ---RIMPVRNAVSWNAMVAALACSGDMGAAEDLFRNAPEK---TDAILWTAMVSGYMDTG 185
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI-PDVITVVT 308
V++ ++ F MP RNLVSWN+++ G+ +N + ++ + M+ E+ + P+ T+ +
Sbjct: 186 NVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMV--EDSIVQPNASTLSS 243
Query: 309 VL 310
VL
Sbjct: 244 VL 245
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
Query: 85 SLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYS 144
+++++++ + + VLL C + + G++VH+ S + + T L++MY
Sbjct: 227 TMVEDSIVQPNASTLSSVLL-GCSNLSALGFGRQVHQWC-MKLPLSRNVTVGTSLLSMYC 284
Query: 145 LCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFP 204
CG D+ +VFD + T+++ WNA++SG+ ++ + +F E D + PD T
Sbjct: 285 KCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLF-EKMKDEGVVPDWITLL 343
Query: 205 CVIKAC--GGIADVGF 218
V+ AC G+ D G
Sbjct: 344 AVLTACIHTGLCDFGI 359
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 115/203 (56%), Gaps = 9/203 (4%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
++ K++H L+ + S + +++T+LI +Y G SR FD + +N+F WN+++
Sbjct: 34 NVNATKKLHALLLVFGK-SQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSII 92
Query: 172 SGFTKNELYTDVLSIFVELSS---DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK 228
S + + Y + ++ +L S L+PD +TFP ++KAC + D G VH K
Sbjct: 93 SAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFK 149
Query: 229 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
MG DVFV+ +L+ +Y + ++ K+F MP +++ SWN++I GF +NG + + +
Sbjct: 150 MGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGV 209
Query: 289 LIKMMGCEEGFIPDVITVVTVLP 311
L +M G EG D ITV ++LP
Sbjct: 210 LNRMKG--EGVKMDTITVASILP 230
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 105/208 (50%), Gaps = 9/208 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC D GK+VH V F +D + L+ +YS G + +VF + +
Sbjct: 130 ILKACVSLVD---GKKVHCCV-FKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVK 185
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA++SGF +N L + + + +K D T ++ C DV G +
Sbjct: 186 DVGSWNAMISGFCQNGNAAGALGVLNRMKGEG-VKMDTITVASILPVCAQSDDVINGVLI 244
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K GL DVFVSNALI MY K +++ +F+ M R+LVSWNSII + +N
Sbjct: 245 HLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDP 304
Query: 283 CESFDLLIKM-MGCEEGFIPDVITVVTV 309
+ M +G G PD++TVV++
Sbjct: 305 STALRFFKGMQLG---GIRPDLLTVVSL 329
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 2/199 (1%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
D I + + V D +I L+ MY+ G+ + VFD L ++ WN LV
Sbjct: 338 DQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLV 397
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
+G+T+N L ++ + + + + P+ T+ +I A + + G +H K L
Sbjct: 398 TGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSL 457
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
DVFV+ LI +YGKC +E+ + LF +P V WN+II +G E+ L
Sbjct: 458 YLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKD 517
Query: 292 MMGCEEGFIPDVITVVTVL 310
M+ E D IT V++L
Sbjct: 518 MLA--ERVKADHITFVSLL 534
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 122/232 (52%), Gaps = 6/232 (2%)
Query: 81 NKALSLLQENLHNADLKEATGVL--LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
+KAL+ ++ L + G+ + AC + ++ G+++H S FS+D
Sbjct: 533 DKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG-FSSDLPFQNA 591
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+T+YS CG +S F+ + + WNALVSGF ++ + L +FV ++ + +
Sbjct: 592 LVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG-IDN 650
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+NFTF +KA A++ G VH + K G + V NALI+MY KC + + K F
Sbjct: 651 NNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQF 710
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +N VSWN+II +S++GF E+ D +M+ P+ +T+V VL
Sbjct: 711 LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMI--HSNVRPNHVTLVGVL 760
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 111/209 (53%), Gaps = 5/209 (2%)
Query: 103 LLQAC-GHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+AC G ++ +++H + + + N LI +YS GF +RRVFD L+
Sbjct: 152 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNP-LIDLYSRNGFVDLARRVFDGLRL 210
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ W A++SG +KNE + + +F ++ + P + F V+ AC I + G
Sbjct: 211 KDHSSWVAMISGLSKNECEAEAIRLFCDMYV-LGIMPTPYAFSSVLSACKKIESLEIGEQ 269
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG+ K+G D +V NAL+++Y + +F M +R+ V++N++I G S+ G+
Sbjct: 270 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 329
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L +M +G PD T+ +++
Sbjct: 330 GEKAMELFKRMH--LDGLEPDSNTLASLV 356
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + +EIG+++H LV FS+D + L+++Y G + + +F ++ R
Sbjct: 254 VLSACKKIESLEIGEQLHGLV-LKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR 312
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ +N L++G ++ + +F + D L+PD+ T ++ AC + G +
Sbjct: 313 DAVTYNTLINGLSQCGYGEKAMELFKRMHLDG-LEPDSNTLASLVVACSADGTLFRGQQL 371
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K+G + + AL+ +Y KCA +E + F N+V WN ++ +
Sbjct: 372 HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDL 431
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
SF + + M EE +P+ T ++L
Sbjct: 432 RNSFRIF-RQMQIEE-IVPNQYTYPSIL 457
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 4/192 (2%)
Query: 103 LLQAC-GHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL+ C ++ G+++H + SN ++ +L Y G + +VFD +
Sbjct: 50 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNG-CLSEKLFDFYLFKGDLYGAFKVFDEMPE 108
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC-GGIADVGFGS 220
R +F WN ++ L +V +FV + S+ + P+ TF V++AC GG
Sbjct: 109 RTIFTWNKMIKELASRNLIGEVFGLFVRMVSEN-VTPNEGTFSGVLEACRGGSVAFDVVE 167
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H GL V N LI +Y + FV+ ++F+ + ++ SW ++I G S+N
Sbjct: 168 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 227
Query: 281 FSCESFDLLIKM 292
E+ L M
Sbjct: 228 CEAEAIRLFCDM 239
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 90/191 (47%), Gaps = 2/191 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ AC + + G+++H + F+++ I L+ +Y+ C + F +
Sbjct: 355 LVVACSADGTLFRGQQLHAYTT-KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE 413
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN ++ + + + IF ++ + E+ P+ +T+P ++K C + D+ G +
Sbjct: 414 NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE-EIVPNQYTYPSILKTCIRLGDLELGEQI 472
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K + +V + LI MY K ++ + +++VSW ++I G+++ F
Sbjct: 473 HSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFD 532
Query: 283 CESFDLLIKMM 293
++ +M+
Sbjct: 533 DKALTTFRQML 543
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 9/119 (7%)
Query: 196 LKPDNFTFPCVIKAC----GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
++P++ T +++ C G + + G +H K+GL + +S L Y +
Sbjct: 40 IRPNHQTLKWLLEGCLKTNGSLDE---GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 96
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F+ MPER + +WN +I + E F L ++M+ E P+ T VL
Sbjct: 97 YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVS--ENVTPNEGTFSGVL 153
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 108/208 (51%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + I + VH + F D + L+ Y+ CG SRRVFD + R
Sbjct: 267 VLSACSRVSEKSITEGVHGFL-IKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAER 325
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN++++ + +N + T+ + IF + D E+ + T V+ AC G +
Sbjct: 326 DVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCI 385
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H KMGL +VFV ++I MY KC VE K F+ M E+N+ SW++++ G+ +G +
Sbjct: 386 HDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHA 445
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ ++ +M G P+ IT V+VL
Sbjct: 446 KEALEVFYEMN--MAGVKPNYITFVSVL 471
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 105/197 (53%), Gaps = 8/197 (4%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+++C D+ G++ H+ + F D +++ L+ MYS CG D+R +FD + RN
Sbjct: 159 IKSCSALLDLHSGRQAHQQ-ALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRN 217
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVEL-------SSDTELKPDNFTFPCVIKACGGIADV 216
+ W ++++G+ +N+ L +F E D E+ D V+ AC +++
Sbjct: 218 IVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEK 277
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
GVHG K G GD+ V N L+ Y KC + ++F+ M ER+++SWNSII +
Sbjct: 278 SITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVY 337
Query: 277 SENGFSCESFDLLIKMM 293
++NG S ES ++ +M+
Sbjct: 338 AQNGMSTESMEIFHRMV 354
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+F WN++++ ++ + L F + LKP+ TFPC IK+C + D+ G
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRK-LSLKPNRSTFPCAIKSCSALLDLHSGRQA 174
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
H A G D+FVS+AL+ MY KC + + LF+ + RN+VSW S+I G+ +N
Sbjct: 175 HQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQN 231
>gi|302793025|ref|XP_002978278.1| hypothetical protein SELMODRAFT_108052 [Selaginella moellendorffii]
gi|300154299|gb|EFJ20935.1| hypothetical protein SELMODRAFT_108052 [Selaginella moellendorffii]
Length = 337
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ AC D+ G RVHE + A F D I + L+ MY CG +R VF+ +
Sbjct: 16 LIDACSCLGDLRQGMRVHERLHAGG-FDIDNSIASGLVNMYRKCGSLTGARSVFNKMDRN 74
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WNAL++G+ + + L +F ++ + +K D TF V++AC + + G V
Sbjct: 75 DLLSWNALIAGYAEQGDSHEALQVFRWMACEG-MKSDRVTFLSVLEACSSLTALEQGRAV 133
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H GL D + N+LI +YGKC +++ LF+ M R+LV+WNS+I +S +G
Sbjct: 134 HASIVSRGLDSDTGLKNSLINLYGKCGSLKDAESLFDCMRCRDLVTWNSMITTYSHHGRD 193
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
S ++ ++M +G P+ +T V++L
Sbjct: 194 EISLEVFMQMK--LDGIQPNDVTFVSML 219
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
+KPD F +I AC + D+ G VH G D +++ L+ MY KC +
Sbjct: 6 IKPDKIVFVSLIDACSCLGDLRQGMRVHERLHAGGFDIDNSIASGLVNMYRKCGSLTGAR 65
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F M +L+SWN++I G++E G S E+ + + M C EG D +T ++VL
Sbjct: 66 SVFNKMDRNDLLSWNALIAGYAEQGDSHEALQVF-RWMAC-EGMKSDRVTFLSVL 118
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 87/176 (49%), Gaps = 11/176 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC +E G+ VH + S +D + LI +Y CG D+ +FD ++ R
Sbjct: 117 VLEACSSLTALEQGRAVHASI-VSRGLDSDTGLKNSLINLYGKCGSLKDAESLFDCMRCR 175
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVG--- 217
+L WN++++ ++ + L +F+++ D ++P++ TF ++ C G+ + G
Sbjct: 176 DLVTWNSMITTYSHHGRDEISLEVFMQMKLDG-IQPNDVTFVSMLFVCSHAGLFEDGCKC 234
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
FGS + A + V N +I + G+ ++E L +PE V W +++
Sbjct: 235 FGS----ITADYSMELTVDHYNCVIDLLGRAGNLDEAEILVANLPEPCSVDWMTLL 286
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 104/189 (55%), Gaps = 1/189 (0%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L C + G+ +H+ + AS + D ++ L+ MY C +++R+VF+ +K RN
Sbjct: 118 LGGCASVAGLADGRAIHQRILAS-KVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARN 176
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ + A++S + + + + L +F +S ++P+ +TF ++ A G+ ++ G VH
Sbjct: 177 VRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVH 236
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
A G +V V NAL+ MYGKC E K+F+ M RN++SW S+I ++++G
Sbjct: 237 RHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQ 296
Query: 284 ESFDLLIKM 292
E+ +L +M
Sbjct: 297 EALNLFKRM 305
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 110/208 (52%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ AC + +E G+R+HE + T F D + T L+ MY+ CG D++RVF+ ++ +
Sbjct: 16 LVAACTKLQALEEGRRLHEHLII-TGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIK 74
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+LF W++++S + + + ++ + ++ ++P+ TF C + C +A + G +
Sbjct: 75 DLFAWSSIISAYARAGRGEMAVVLYRRMIAEG-VEPNVVTFACALGGCASVAGLADGRAI 133
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + D + ++L+ MY KC + E K+FE M RN+ S+ ++I + + G
Sbjct: 134 HQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEH 193
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L +M E P+ T T+L
Sbjct: 194 AEALELFSRMSKV-EAIEPNAYTFATIL 220
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 17/185 (9%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC ++ G+ +H V + S + T L++MY+ CG D+RRVF+ +KTR+
Sbjct: 318 LNACALLGALDEGREIHHRVVEAHLASPQ--METSLLSMYARCGSLDDARRVFNRMKTRD 375
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG-----F 218
F NA+++ FT++ L I+ + + + D TF V+ AC + V F
Sbjct: 376 AFSCNAMIAAFTQHGRKKQALRIYRRMEQEG-IPADGITFVSVLVACSHTSLVADCRDFF 434
Query: 219 GSGV--HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICG 275
S V HG+ + L+ ++ G+ EE+V E MP + + V+W +++ G
Sbjct: 435 QSLVMDHGV---VPLVEHYLCMVDVLGRSGRLGDAEELV---ETMPYQTDAVAWMTLLSG 488
Query: 276 FSENG 280
+G
Sbjct: 489 CKRHG 493
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D F ++ AC + + G +H G D+ + AL+ MY KC +++ ++F
Sbjct: 9 DKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVF 68
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E M ++L +W+SII ++ G + L +M+ EG P+V+T L
Sbjct: 69 EGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIA--EGVEPNVVTFACAL 118
>gi|255579519|ref|XP_002530602.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529850|gb|EEF31782.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 567
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 126/235 (53%), Gaps = 11/235 (4%)
Query: 82 KALSLLQENLH---NADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
KAL L QE H + D+ VL E D+ G + H + T F + + +
Sbjct: 224 KALKLFQEMTHRGIDVDMYTLASVLTAFTCLE-DLFGGFQFHANL-IKTGFYRNCHVGSG 281
Query: 139 LITMYSLCGFP-LDSRRVFDSLKTRNLFQWNALVSGFT-KNELYTDVLSIFVELSSDTEL 196
L+ +Y+ CG LD R++F ++ +L WN ++S ++ EL + L F +
Sbjct: 282 LVDLYAKCGGGMLDCRKIFVEIREPDLVLWNTMISAYSLDEELSEETLDCFRRMQR-AGF 340
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD-VFVSNALIAMYGKCAFVEEMV 255
+PD+ +F CVI+AC ++ G +H M K + + + V+NAL+AMY KC +++
Sbjct: 341 RPDDCSFVCVIRACSNLSSPSQGKQIHAMTVKSEIPSNQISVNNALVAMYSKCGNLQDAR 400
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+LF+ MPE N VS+NSII G++++G ES L +M+ E G P IT ++VL
Sbjct: 401 RLFDRMPEHNTVSFNSIIAGYAQHGIKTESLCLFEQML--EIGIAPTRITFISVL 453
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 102/246 (41%), Gaps = 49/246 (19%)
Query: 103 LLQACGHEKDIEIGKRVH-----ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
LL+ C KD+ IGK ++ L+ ST SN FII +YS C + F+
Sbjct: 14 LLKECIANKDLLIGKSLYTLYLKSLLPPSTYLSNHFII------LYSKCNRLTLAHHAFN 67
Query: 158 SLKTRNLFQWNALVSGFTKNEL-------------------------YTD------VLSI 186
N+F +N L+ + K L Y D L +
Sbjct: 68 QNHEPNVFSFNVLLDAYAKKSLTHIARGLFDQIPQPDAISYNTLITAYADCGDSLNALYL 127
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
F E+ +T + D +T VI AC DV +H +A GL V V N+ + YG
Sbjct: 128 FREMR-ETGIDMDGYTLSGVITACCN--DVNLIRQLHCLAGNYGLDSYVSVKNSFVTYYG 184
Query: 247 KCAFVEEMVKLFE--VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVI 304
K F+EE ++F + R+ VSWN++I + ++ L +M G D+
Sbjct: 185 KNGFLEEAERVFYGIEIENRDQVSWNTMIVAYGRQREGFKALKLFQEMT--HRGIDVDMY 242
Query: 305 TVVTVL 310
T+ +VL
Sbjct: 243 TLASVL 248
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC + GK++H + S SN +N L+ MYS CG D+RR+FD +
Sbjct: 350 VIRACSNLSSPSQGKQIHAMTVKSEIPSNQISVNNALVAMYSKCGNLQDARRLFDRMPEH 409
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
N +N++++G+ ++ + T+ L +F ++ + + P TF V+ AC V G
Sbjct: 410 NTVSFNSIIAGYAQHGIKTESLCLFEQM-LEIGIAPTRITFISVLSACAHTGKVEEG 465
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
DI K++H V + + +L+ +Y+ CG P +R +FD + +N+ +N ++
Sbjct: 33 DINTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMI 92
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
+ N LY D L ++ + + PD +T+PCV+KA + G +HG K+GL
Sbjct: 93 RSYVNNHLYKDALLVYKTMYTQG-FVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGL 151
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
+++V N LIAMYGKC ++E ++ + +P R++VSWNS++ +++NG ++ +L +
Sbjct: 152 DLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCRE 211
Query: 292 MMGCEEGFIPDVITVVTVLP 311
M P+ T+ ++LP
Sbjct: 212 MEAL--NLKPNDCTMASLLP 229
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
+ +F L +++ WN +++ + N + + + ++ ++ ++ ++PD + V+ A G
Sbjct: 243 KEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANG-VEPDVVSIVSVLPAYGD 301
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
++ + G VH A + L+ ++ + NALI MY KC + + +F M R++VSW SI
Sbjct: 302 LSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSI 361
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I + + G ++ + +M G PD I V+VL
Sbjct: 362 ISAYGKCGQGRDAVAVFAEMR--NSGLNPDSIAFVSVL 397
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L A G + +G+RVH+ N ++ LI MY+ CG D+R VF+ ++ R
Sbjct: 295 VLPAYGDLSALSLGRRVHKFAERKKLLPN-LLLENALIDMYAKCGCLRDARAVFNQMQFR 353
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +++S + K D +++F E+ ++ L PD+ F V+ AC + G
Sbjct: 354 DVVSWTSIISAYGKCGQGRDAVAVFAEM-RNSGLNPDSIAFVSVLAACSHAGLLDDGRYY 412
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ A+ G+ + ++ + G+ ++E MP
Sbjct: 413 FNLMAECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMP 452
>gi|7406390|emb|CAB85500.1| putative protein [Arabidopsis thaliana]
Length = 837
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 118/214 (55%), Gaps = 13/214 (6%)
Query: 103 LLQACGHEKDIEIGKRVH----ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
LL+ D+E+ K VH +L T+ N LI+ Y GFP ++ VF S
Sbjct: 86 LLRLSAQYHDVEVTKAVHASFLKLREEKTRLGN------ALISTYLKLGFPREAILVFVS 139
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
L + + + AL+SGF++ L + L +F + ++P+ +TF ++ AC ++
Sbjct: 140 LSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSL 199
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGK--CAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G +HG+ K G + VFVSN+L+++Y K + ++++KLF+ +P+R++ SWN+++
Sbjct: 200 GIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSL 259
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ G S ++FDL +M EGF D T+ T+L
Sbjct: 260 VKEGKSHKAFDLFYEMNRV-EGFGVDSFTLSTLL 292
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 112/237 (47%), Gaps = 11/237 (4%)
Query: 78 KSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHEL-VSASTQFSNDFIIN 136
K+L +LQ + D + V ACG + ++ +++H + T F+ I
Sbjct: 400 KALKLFTDMLQRGVELTDFSLTSAV--DACGLVSEKKVSEQIHGFCIKFGTAFNP--CIQ 455
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNA---LVSGFTKNELYTDVLSIFVELSSD 193
T L+ M + C D+ +FD + NL A ++ G+ +N L +S+F +
Sbjct: 456 TALLDMCTRCERMADAEEMFDQWPS-NLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCE 514
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+L D + ++ CG + G +H A K G D+ + N+LI+MY KC ++
Sbjct: 515 QKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDD 574
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+K+F M E +++SWNS+I + E+ L +M E+ PD+IT+ V+
Sbjct: 575 AIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMN--EKEIKPDIITLTLVI 629
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 40/227 (17%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMY-----SLCGFPLDSRRVFD 157
+L AC +G ++H L+ S F N ++ L+++Y S C D ++FD
Sbjct: 187 ILTACVRVSRFSLGIQIHGLIVKS-GFLNSVFVSNSLMSLYDKDSGSSCD---DVLKLFD 242
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
+ R++ WN +VS K +F E++ D+FT ++ +C + +
Sbjct: 243 EIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLL 302
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGK------------------------------ 247
G +HG A ++GL+ ++ V+NALI Y K
Sbjct: 303 RGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYM 362
Query: 248 -CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
V+ V++F + E+N +++N+++ GF NG ++ L M+
Sbjct: 363 SFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDML 409
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 20/191 (10%)
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKN-------ELYTD 182
+ D + T +IT Y G + +F ++ +N +NAL++GF +N +L+TD
Sbjct: 348 AQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTD 407
Query: 183 VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALI 242
+L VEL+ +F+ + ACG +++ +HG K G + + AL+
Sbjct: 408 MLQRGVELT--------DFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALL 459
Query: 243 AMYGKCAFVEEMVKLFEVMPERNLVS---WNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
M +C + + ++F+ P NL S SII G++ NG ++ L + + CE+
Sbjct: 460 DMCTRCERMADAEEMFDQWPS-NLDSSKATTSIIGGYARNGLPDKAVSLFHRTL-CEQKL 517
Query: 300 IPDVITVVTVL 310
D +++ +L
Sbjct: 518 FLDEVSLTLIL 528
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 113/209 (54%), Gaps = 8/209 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQ--FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
L+AC D E+G E++S++ + + + + +I+ G +++RVFD +
Sbjct: 137 LKACASSLDYEMGM---EIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPN 193
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+++ WN+++ G+ + + +F E+ + +KP T +I+ACGGI ++ G
Sbjct: 194 KDVVCWNSIIGGYVQAGCFDVAFQLFFEMHG-SGIKPSPITMTSLIQACGGIGNLKLGKC 252
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG +GL D+ V + + MY K +E +F MP RNLVSWN++I G NG
Sbjct: 253 MHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGL 312
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
ESFDL +++ GF D+ T+V++L
Sbjct: 313 VGESFDLFHRLVRSSGGF--DLTTIVSLL 339
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 111/208 (53%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+QACG ++++GK +H V ND ++ T + MYS G +R VF + TR
Sbjct: 237 LIQACGGIGNLKLGKCMHGYV-LGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTR 295
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL WNA++SG +N L + +F L + D T +++ C A + G +
Sbjct: 296 NLVSWNAMISGCVRNGLVGESFDLFHRLVRSSG-GFDLTTIVSLLQGCSQTASLATGKIL 354
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A + ++ +S A++ +Y KC +++ +F M +RN+++W +++ G ++NG +
Sbjct: 355 HGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHA 413
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M EEG + +T V+++
Sbjct: 414 EDALRLFAQMQ--EEGIAANSVTFVSLV 439
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 107/209 (51%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ C + GK +H A F ++ I++T ++ +YS CG + VF+ +K R
Sbjct: 338 LLQGCSQTASLATGKILHG--CAIRSFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDR 395
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A++ G +N D L +F ++ + + ++ TF ++ +C + + G +
Sbjct: 396 NVITWTAMLVGLAQNGHAEDALRLFAQMQEEG-IAANSVTFVSLVHSCAHLGSLKRGRSI 454
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENGF 281
HG ++G D+ AL+ MY KC + ++F +++V WNS+I G+ +G
Sbjct: 455 HGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGH 514
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ + KM+ EEG P+ T +++L
Sbjct: 515 GYQAVGIYHKMI--EEGLKPNQTTFLSLL 541
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 3/185 (1%)
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
+ S D + T+L+ YS +R VFD NA++ G+ ++ Y + L
Sbjct: 57 TNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLE 116
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
+F L L+ D+ + +KAC D G + A + G+ + FV +++I+
Sbjct: 117 LF-GLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFL 175
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
K + E ++F+ MP +++V WNSII G+ + G +F L +M G G P IT
Sbjct: 176 VKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHG--SGIKPSPIT 233
Query: 306 VVTVL 310
+ +++
Sbjct: 234 MTSLI 238
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 122/232 (52%), Gaps = 6/232 (2%)
Query: 81 NKALSLLQENLHNADLKEATGVL--LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
+KAL+ ++ L + G+ + AC + ++ G+++H S FS+D
Sbjct: 573 DKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG-FSSDLPFQNA 631
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+T+YS CG +S F+ + + WNALVSGF ++ + L +FV ++ + +
Sbjct: 632 LVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG-IDN 690
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+NFTF +KA A++ G VH + K G + V NALI+MY KC + + K F
Sbjct: 691 NNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQF 750
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +N VSWN+II +S++GF E+ D +M+ P+ +T+V VL
Sbjct: 751 LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMI--HSNVRPNHVTLVGVL 800
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 111/209 (53%), Gaps = 5/209 (2%)
Query: 103 LLQAC-GHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+AC G ++ +++H + + + N LI +YS GF +RRVFD L+
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNP-LIDLYSRNGFVDLARRVFDGLRL 250
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ W A++SG +KNE + + +F ++ + P + F V+ AC I + G
Sbjct: 251 KDHSSWVAMISGLSKNECEAEAIRLFCDMYV-LGIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG+ K+G D +V NAL+++Y + +F M +R+ V++N++I G S+ G+
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 369
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L +M +G PD T+ +++
Sbjct: 370 GEKAMELFKRMH--LDGLEPDSNTLASLV 396
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + +EIG+++H LV FS+D + L+++Y G + + +F ++ R
Sbjct: 294 VLSACKKIESLEIGEQLHGLV-LKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR 352
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ +N L++G ++ + +F + D L+PD+ T ++ AC + G +
Sbjct: 353 DAVTYNTLINGLSQCGYGEKAMELFKRMHLDG-LEPDSNTLASLVVACSADGTLFRGQQL 411
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K+G + + AL+ +Y KCA +E + F N+V WN ++ +
Sbjct: 412 HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDL 471
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
SF + + M EE +P+ T ++L
Sbjct: 472 RNSFRIF-RQMQIEE-IVPNQYTYPSIL 497
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 4/192 (2%)
Query: 103 LLQAC-GHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL+ C ++ G+++H + SN ++ +L Y G + +VFD +
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNG-CLSEKLFDFYLFKGDLYGAFKVFDEMPE 148
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC-GGIADVGFGS 220
R +F WN ++ L +V +FV + S+ + P+ TF V++AC GG
Sbjct: 149 RTIFTWNKMIKELASRNLIGEVFGLFVRMVSEN-VTPNEGTFSGVLEACRGGSVAFDVVE 207
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H GL V N LI +Y + FV+ ++F+ + ++ SW ++I G S+N
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 267
Query: 281 FSCESFDLLIKM 292
E+ L M
Sbjct: 268 CEAEAIRLFCDM 279
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 90/191 (47%), Gaps = 2/191 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ AC + + G+++H + F+++ I L+ +Y+ C + F +
Sbjct: 395 LVVACSADGTLFRGQQLHAYTT-KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE 453
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN ++ + + + IF ++ + E+ P+ +T+P ++K C + D+ G +
Sbjct: 454 NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE-EIVPNQYTYPSILKTCIRLGDLELGEQI 512
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K + +V + LI MY K ++ + +++VSW ++I G+++ F
Sbjct: 513 HSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFD 572
Query: 283 CESFDLLIKMM 293
++ +M+
Sbjct: 573 DKALTTFRQML 583
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 147 GFP--LDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFP 204
G P L +R VF +L + A+ +++E + + VE + ++P++ T
Sbjct: 32 GVPRKLKTRTVFPTLCGTRRASFAAISVYISEDESFQEKRIDSVE---NRGIRPNHQTLK 88
Query: 205 CVIKAC----GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV 260
+++ C G + + G +H K+GL + +S L Y + K+F+
Sbjct: 89 WLLEGCLKTNGSLDE---GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDE 145
Query: 261 MPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
MPER + +WN +I + E F L ++M+ E P+ T VL
Sbjct: 146 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVS--ENVTPNEGTFSGVL 193
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 115/203 (56%), Gaps = 9/203 (4%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
++ K++H L+ + S + +++T+LI +Y G SR FD + +N+F WN+++
Sbjct: 34 NVNATKKLHALLLVFGK-SQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSII 92
Query: 172 SGFTKNELYTDVLSIFVELSS---DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK 228
S + + Y + ++ +L S L+PD +TFP ++KAC + D G VH K
Sbjct: 93 SAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFK 149
Query: 229 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
MG DVFV+ +L+ +Y + ++ K+F MP +++ SWN++I GF +NG + + +
Sbjct: 150 MGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGV 209
Query: 289 LIKMMGCEEGFIPDVITVVTVLP 311
L +M G EG D ITV ++LP
Sbjct: 210 LNRMKG--EGVKMDTITVASILP 230
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 105/208 (50%), Gaps = 9/208 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC D GK+VH V F +D + L+ +YS G + +VF + +
Sbjct: 130 ILKACVSLVD---GKKVHCCV-FKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVK 185
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA++SGF +N L + + + +K D T ++ C DV G +
Sbjct: 186 DVGSWNAMISGFCQNGNAAGALGVLNRMKGEG-VKMDTITVASILPVCAQSDDVINGVLI 244
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K GL DVFVSNALI MY K +++ +F+ M R+LVSWNSII + +N
Sbjct: 245 HLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDP 304
Query: 283 CESFDLLIKM-MGCEEGFIPDVITVVTV 309
+ M +G G PD++TVV++
Sbjct: 305 STALRFFKGMQLG---GIRPDLLTVVSL 329
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 2/199 (1%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
D I + + V D +I L+ MY+ G+ + VFD L ++ WN LV
Sbjct: 338 DQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLV 397
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
+G+T+N L ++ + + + + P+ T+ +I A + + G +H K L
Sbjct: 398 TGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSL 457
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
DVFV+ LI +YGKC +E+ + LF +P V WN+II +G E+ L
Sbjct: 458 YLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKD 517
Query: 292 MMGCEEGFIPDVITVVTVL 310
M+ E D IT V++L
Sbjct: 518 MLA--ERVKADHITFVSLL 534
>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
Length = 834
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 115/210 (54%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L+AC + +E G VH + + D +++ ++ MY CG ++ ++ D +
Sbjct: 436 GSVLKACAGLQSLEYGLVVHG-KAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIG 494
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ L WN++++GF+ N+ + F E+ D +KPD+FT+ V+ +C +A + G
Sbjct: 495 GQELVSWNSIIAGFSLNKQSEEAQKFFSEML-DMGVKPDHFTYATVLDSCANLATIELGK 553
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG K ++GD F+S+ L+ MY KC + + +FE + + + VSWN++ICG++ +G
Sbjct: 554 QIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKLDFVSWNAMICGYALHG 613
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ ++ + + P+ T V VL
Sbjct: 614 QGFEALEMFERTQ--KANVAPNHATFVAVL 641
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 100/182 (54%), Gaps = 3/182 (1%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F D + ++ +Y C +++ VF ++ R+ WN +++ +NE Y D +
Sbjct: 362 FDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLN 421
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
E+ + ++ D+FT+ V+KAC G+ + +G VHG A K GL D FVS+ ++ MY KC
Sbjct: 422 EMLR-SGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKC 480
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
+ E +KL + + + LVSWNSII GFS N S E+ +M+ + G PD T T
Sbjct: 481 GMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEML--DMGVKPDHFTYAT 538
Query: 309 VL 310
VL
Sbjct: 539 VL 540
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 34/220 (15%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L + GH + G+ H + S F+ N L+ MY+ CG + VFD++ R
Sbjct: 38 LCASAGHSA-LATGQAAHARMLVSGFVPTMFVSNC-LLQMYARCGGAAHAHGVFDTMPHR 95
Query: 163 N-------------------------------LFQWNALVSGFTKNELYTDVLSIFVELS 191
+ + WNAL+SG+ + ++ D++ + +E++
Sbjct: 96 DTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGLSIEMA 155
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ PD T ++KACGG+ D+ G +H +A K GL DV +AL+ MYGKC +
Sbjct: 156 R-CGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSL 214
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
E+ + F M ERN VSW ++I G +N +LL +
Sbjct: 215 EDALHFFHGMGERNSVSWGAVIAGCVQNEQYMRGLELLCR 254
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 67/244 (27%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
VLL+ACG D+ +G ++H L + T D + L+ MY C D+ F +
Sbjct: 168 VLLKACGGLDDLALGVQIHAL-AVKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGE 226
Query: 162 RNLFQWNALVSGFTKNELY--------------------------------------TDV 183
RN W A+++G +NE Y T +
Sbjct: 227 RNSVSWGAVIAGCVQNEQYMRGLELLCRCKAITCLSTARQLHAHAIKNKFSSDRVVGTAI 286
Query: 184 LSIFVELSSDTELKPDNFTFP-CVIKACGGI----------------------ADVGFG- 219
+ ++ + S + + F P ++ C + + +GFG
Sbjct: 287 VDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGV 346
Query: 220 ---SGVHGMAAKM-GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
SGV A++ G DV V NA++ +YGKC + E +F+ M +R+ VSWN+II
Sbjct: 347 VSLSGVFSACAEVKGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAA 406
Query: 276 FSEN 279
+N
Sbjct: 407 LEQN 410
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 202 TFPCVIKACG--GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
TF V + C G + + G H G + +FVSN L+ MY +C +F+
Sbjct: 31 TFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFD 90
Query: 260 VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
MP R+ VSWN+++ ++ G + + LL M PDV++
Sbjct: 91 TMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPD------PDVVS 130
>gi|255562460|ref|XP_002522236.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538489|gb|EEF40094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 93/173 (53%), Gaps = 3/173 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +EIGK VH+ V D I+ L+ MY+ CG D+ VF + +
Sbjct: 408 VLHACACSGSLEIGKDVHDYVK-ENNMQKDRIVCNSLMDMYAKCGSMEDANLVFLEMPNK 466
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN ++ G++KN + L +FV + ELKPD T C++ AC +A + G +
Sbjct: 467 DIVSWNTMIGGYSKNGRPNETLHLFVAMVQ--ELKPDGRTMACILPACASLAALDRGREI 524
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
HG + G D+ V+NALI MY KC + F+++P ++L+SW +I G
Sbjct: 525 HGYIQRNGCFDDLHVANALIDMYAKCGALALARLFFDMIPVKDLISWTVMIAG 577
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + + +G+ +H + Q L+ MYS CG ++ RVF + R
Sbjct: 307 VLAACANSGNFPLGRVLHAF-AIKAQLDQRMTFVNTLLDMYSKCGDLNNAIRVFQKMGER 365
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +L++G+ + L + + +F E+ + ++PDNFT V+ AC + G V
Sbjct: 366 SVVSWTSLIAGYAREGLSGEGIRLFHEMEREG-VRPDNFTVTAVLHACACSGSLEIGKDV 424
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + + D V N+L+ MY KC +E+ +F MP +++VSWN++I G+S+NG
Sbjct: 425 HDYVKENNMQKDRIVCNSLMDMYAKCGSMEDANLVFLEMPNKDIVSWNTMIGGYSKNGRP 484
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ L + M+ + PD T+ +LP
Sbjct: 485 NETLHLFVAMV---QELKPDGRTMACILP 510
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 133/272 (48%), Gaps = 7/272 (2%)
Query: 39 SLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKE 98
SL S + S S AK + F ++I LCE SL A+ LL +
Sbjct: 44 SLHSSYATLSIFSSPAKEEDFKIA--DFNRKICELCEVG-SLKNAIELLDMYPKSNIDSN 100
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
+LQ C ++ GK+VH +S+S F D ++ T+L+ MY CG + R +FD
Sbjct: 101 TYCSILQLCAELNSLQEGKKVHSFISSSGIFV-DGLLGTKLVFMYVNCGDIREGRVIFDK 159
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ +F WN ++SG+ K + + + +F ++ D ++ ++ T C++K + V
Sbjct: 160 IANEKVFLWNLMLSGYAKIGAFEESVYLFRKML-DLGIQVNSHTVSCILKCFAALGSVKE 218
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G VHG K+G V N+LI+ Y K +E ++F+ + R++VSWNS+I G
Sbjct: 219 GEWVHGYLLKLGFGSYNTVVNSLISFYFKTRKIEAAYEVFDELKNRDIVSWNSMISGTVA 278
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
N + + +M+ F D++T+V VL
Sbjct: 279 NDLPEKGIQVFKEMLYLGVSF--DLVTLVNVL 308
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 85/173 (49%), Gaps = 9/173 (5%)
Query: 144 SLCGFPLDSRR------VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
SL F +R+ VFD LK R++ WN+++SG N+L + +F E+ +
Sbjct: 240 SLISFYFKTRKIEAAYEVFDELKNRDIVSWNSMISGTVANDLPEKGIQVFKEMLY-LGVS 298
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
D T V+ AC + G +H A K L + N L+ MY KC + +++
Sbjct: 299 FDLVTLVNVLAACANSGNFPLGRVLHAFAIKAQLDQRMTFVNTLLDMYSKCGDLNNAIRV 358
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ M ER++VSW S+I G++ G S E L +M EG PD TV VL
Sbjct: 359 FQKMGERSVVSWTSLIAGYAREGLSGEGIRLFHEME--REGVRPDNFTVTAVL 409
>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Glycine max]
Length = 650
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 137/254 (53%), Gaps = 12/254 (4%)
Query: 66 FLQEITTLCEESKSLNKALSLLQEN----LHNADLKEATGVLLQACGHEKDIEIGKRVH- 120
F + +LC+ +L+KAL L++ + + + +E+ + L AC + +E G+++H
Sbjct: 36 FNSTLKSLCKWG-NLDKALRLIESSKPTPIEEEEEEESISLFLHACISRRSLEHGRKLHL 94
Query: 121 ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF--DSLKTRNLFQWNALVSGFTKNE 178
L+ + + + + T+LIT+YS+CG ++RRVF D K W A+ G+++N
Sbjct: 95 HLLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQIDDEKPPEEPVWVAMAIGYSRNG 154
Query: 179 LYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL-IGDVFV 237
+ L ++ ++ S +KP NF F +KAC + + G +H K + D V
Sbjct: 155 FSHEALLLYRDMLSCC-VKPGNFAFSMALKACSDLDNALVGRAIHAQIVKHDVGEADQVV 213
Query: 238 SNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEE 297
+NAL+ +Y + +E++K+FE MP+RN+VSWN++I GF+ G E+ M E
Sbjct: 214 NNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAGFAGQGRVFETLSAFRVMQ--RE 271
Query: 298 GFIPDVITVVTVLP 311
G IT+ T+LP
Sbjct: 272 GMGFSWITLTTMLP 285
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 3/212 (1%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A + L+AC + +G+ +H + D ++N L+ +Y G + +VF+
Sbjct: 177 AFSMALKACSDLDNALVGRAIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEE 236
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ RN+ WN L++GF + LS F + + + T ++ C + +
Sbjct: 237 MPQRNVVSWNTLIAGFAGQGRVFETLSAFRVMQREG-MGFSWITLTTMLPVCAQVTALHS 295
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G +HG K DV + N+L+ MY KC + K+F+ M ++L SWN+++ GFS
Sbjct: 296 GKEIHGQILKSRKNADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSI 355
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
NG E+ L +M+ G P+ IT V +L
Sbjct: 356 NGQIHEALCLFDEMI--RYGIEPNGITFVALL 385
>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
Length = 792
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 123/241 (51%), Gaps = 14/241 (5%)
Query: 74 CEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
C ++L+ + E +H + T L AC ++ GK +H V F F
Sbjct: 323 CHYREALDLYGRMDHEGVHADGVTYVTA--LGACASLGALKEGKAIHSRV-----FECGF 375
Query: 134 ---IINTRLITMYSLCGFPLDSRRVFDSLKT-RNLFQWNALVSGFTKNELYTDVLSIFVE 189
+++T L+TMY+ CG +R VF+ ++ RN++ W A++S + + + L ++ +
Sbjct: 376 QSLVVHTALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQ 435
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
+ ++ +P+ +TF V+ AC D+ G +HG L +V V NAL+ MY KC
Sbjct: 436 MVAEGT-RPNEYTFSNVLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCG 494
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
+E FE ++LVSWN++I ++++G E+ DL M +G +PD +T+ +
Sbjct: 495 SLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMT--SQGVLPDEVTIASS 552
Query: 310 L 310
L
Sbjct: 553 L 553
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 116/235 (49%), Gaps = 9/235 (3%)
Query: 79 SLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
S++ AL L + H E LLQ CG + GK VH + + N F+ N
Sbjct: 26 SVSDALEQLDQRRHG--YVELYDELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNL- 82
Query: 139 LITMYSLCGFPLDSRRVFDSLKT-RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
LI MY CG +R F + + + + +N ++S + KN L+ L ++ + + +
Sbjct: 83 LIQMYGNCGEIHLARAAFQNFASIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGP-E 141
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHG--MAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
PD T+ V+ +C + + +H + A + ++ + NAL+ MYGKC VEE
Sbjct: 142 PDKITYFIVLGSCSAVGSLREAREIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEAR 201
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F+ + R+ VSW S+I ++ NGF E+ DL +M +G PD IT + L
Sbjct: 202 KVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDA--DGIQPDSITFTSAL 254
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC D+E G ++H V S SN + N L+TMY+ CG ++ F++ +
Sbjct: 451 VLAACSSSGDLEAGMKIHGHVENSELASNVAVQNA-LVTMYAKCGSLELAKSAFEASGRK 509
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WNA++ + ++ L + L ++ ++S L PD T + AC + G +
Sbjct: 510 DLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVL-PDEVTIASSLSACAISGSLQLGREI 568
Query: 223 HGMAAK-MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
H K + V AL+ MYG+C +E +FE M +R+++SW ++ +++ G
Sbjct: 569 HSRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGH 628
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + DL ++M+ G P+ IT ++L
Sbjct: 629 ADQVLDLYLEMV--LHGIRPNEITFTSIL 655
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 103/210 (49%), Gaps = 8/210 (3%)
Query: 102 VLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
++L +C + + +H ++ A ++ + L+ MY CG ++R+VFD +K
Sbjct: 149 IVLGSCSAVGSLREAREIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIK 208
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R+ W +++S + N + L ++ ++ +D ++PD+ TF + AC + D G
Sbjct: 209 NRDAVSWTSMISSYANNGFCDEALDLYQQMDADG-IQPDSITFTSALLACTKLVD---GK 264
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H + D FV +ALI MY +C V + FE + +++V W S++ + +
Sbjct: 265 AIHARIVSSNMESD-FVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTC 323
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL +M EG D +T VT L
Sbjct: 324 HYREALDLYGRMD--HEGVHADGVTYVTAL 351
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC +++G+ +H V + F + ++ T L+ MY CG +R +F+ + R+
Sbjct: 553 LSACAISGSLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRD 612
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
+ W A+ S + + VL +++E+ ++P+ TF ++ C
Sbjct: 613 VLSWTAMTSAYAQQGHADQVLDLYLEMVLHG-IRPNEITFTSILVGC 658
>gi|296084954|emb|CBI28363.3| unnamed protein product [Vitis vinifera]
Length = 930
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 105/193 (54%), Gaps = 2/193 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
V+L+ACG + + G+ VH LV + + F+ N L++MY CG D+ VF +
Sbjct: 125 AVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENA-LVSMYGSCGALEDAAVVFGGID 183
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+L W++++SG+ KN L + L IF ++ S ++PD F F V+ AC + FG+
Sbjct: 184 KPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGG-IEPDAFAFSMVLGACTNLECWDFGT 242
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H KMG +++ N+L+ Y KC +E M ++F M E+NLVSWN+ I G+ N
Sbjct: 243 QAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYVHNF 302
Query: 281 FSCESFDLLIKMM 293
E+ + +M
Sbjct: 303 HYLEALRIFQILM 315
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 102/187 (54%), Gaps = 9/187 (4%)
Query: 131 NDFIINTRL----ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
N+ TRL + MY G ++R++FD + R+L W ++SG+ ++ ++VL +
Sbjct: 45 NEIHARTRLFNLYLRMYVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMM 104
Query: 187 FVEL---SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIA 243
F ++ S L+PD+F F V++ACG + + +G GVHG+ K + D FV NAL++
Sbjct: 105 FWDMLCGSGGGLLRPDSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVS 164
Query: 244 MYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
MYG C +E+ +F + + +LV W+SI+ G+ +NG E + M+ G PD
Sbjct: 165 MYGSCGALEDAAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVS--GGIEPDA 222
Query: 304 ITVVTVL 310
VL
Sbjct: 223 FAFSMVL 229
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A ++L AC + + + G + H + F + + L+ Y+ CG RRVF
Sbjct: 224 AFSMVLGACTNLECWDFGTQAHCYI-IKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSH 282
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ +NL WN ++G+ N Y + L IF L + + D+F+ ++KA G+ +
Sbjct: 283 MSEKNLVSWNTFINGYVHNFHYLEALRIFQILMEEVS-QCDDFSLLSILKAVSGLGHLDH 341
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV 260
G +HG + G+ + +V ++L+ MY C E + EV
Sbjct: 342 GKEIHGYILRAGIETNRYVVSSLLDMYIGCIDHESLYPRVEV 383
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 89/205 (43%), Gaps = 28/205 (13%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYS----------LCGFP 149
T V+L AC +++ GK +H + S SN ++NT LI +YS LC
Sbjct: 468 TSVIL-ACLALENLRKGKELHCKILRSGYESNFSVVNT-LINLYSELWQHKQALKLCSMI 525
Query: 150 LDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS-SDTELKPDNFTFPC-VI 207
DS WN L+ E Y + + + S L P C +
Sbjct: 526 PDSE-----------ISWNFLIRACLGAEDYEIIHKLLWRIQVSHGNLDP---VSACDIF 571
Query: 208 KACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLV 267
+C + G+ H K GLI +SN+LI MY C +E V+ F +MPE++
Sbjct: 572 ASCSSPVLLNVGTQAHAYMTKRGLISHPTISNSLIQMYSACGKFDEAVQAFNLMPEKDTC 631
Query: 268 SWNSIICGFSENGFSCESFDLLIKM 292
SW SI+ E+G E+ +L+ +M
Sbjct: 632 SWTSILSARVEHGHPSEALNLISQM 656
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 2/142 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I T L+ SL ++RVF ++ + W+AL+SG + N + + L +F ++
Sbjct: 397 DEFIMTSLLKWCSLESSLETAKRVFTRVEQPDTAPWSALISGHSWNGCFAEALKLFRKMQ 456
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
D +K + FTF VI AC + ++ G +H + G + V N LI +Y +
Sbjct: 457 FDG-IKANEFTFTSVILACLALENLRKGKELHCKILRSGYESNFSVVNTLINLYSELWQH 515
Query: 252 EEMVKLFEVMPERNLVSWNSII 273
++ +KL ++P+ +SWN +I
Sbjct: 516 KQALKLCSMIPDSE-ISWNFLI 536
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 114/208 (54%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++++C + IGK VH + + F D + L+T YS CG +R+VFD + +
Sbjct: 113 VIKSCADLSALRIGKGVH-CHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEK 171
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+LVSGF +N L + + +F ++ ++ +PD+ TF ++ AC V GS V
Sbjct: 172 SIVAWNSLVSGFEQNGLADEAIQVFYQMR-ESGFEPDSATFVSLLSACAQTGAVSLGSWV 230
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H GL +V + ALI +Y +C V + ++F+ M E N+ +W ++I + +G+
Sbjct: 231 HQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYG 290
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L KM + G IP+ +T V VL
Sbjct: 291 QQAVELFNKMED-DCGPIPNNVTFVAVL 317
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 110/216 (50%), Gaps = 8/216 (3%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSAS-----TQFSNDFIINTRLITMYSLCGFPLDSRR 154
T V + +E + G RV +L T + + T+LIT+ +
Sbjct: 3 TKVAANSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHL 62
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
+F S+ + F +N+++ +K L ++ + + S + + P N+TF VIK+C ++
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLS-SNVSPSNYTFTSVIKSCADLS 121
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+ G GVH A G D +V AL+ Y KC +E ++F+ MPE+++V+WNS++
Sbjct: 122 ALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVS 181
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
GF +NG + E+ + +M E GF PD T V++L
Sbjct: 182 GFEQNGLADEAIQVFYQMR--ESGFEPDSATFVSLL 215
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 2/158 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + +G VH+ + S + + T LI +YS CG +R VFD +K
Sbjct: 214 LLSACAQTGAVSLGSWVHQYI-ISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKET 272
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A++S + + + +F ++ D P+N TF V+ AC V G V
Sbjct: 273 NVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSV 332
Query: 223 HG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
+ M LI V ++ M G+ F++E K
Sbjct: 333 YKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIH 370
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 99/179 (55%), Gaps = 2/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + T +IT YS G +R FD + TRN+ WNA++ + ++ D L ++ ++
Sbjct: 457 DIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDML 516
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
++ ++ PD T+ + + C I G + G K+GLI D V NA+I MY KC +
Sbjct: 517 TEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRI 576
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E K F+ + ++LVSWN++I G+S++G ++ ++ ++ +G PD I+ V VL
Sbjct: 577 SEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDIL--NKGAKPDYISYVAVL 633
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC +E GK++H V + + ++ + ++ +Y+ CG +++RVF SL+ RN
Sbjct: 298 LTACARLSSLEWGKQLHVQVIRNLPHIDPYVASA-MVELYAKCGCFKEAKRVFSSLRDRN 356
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
W L+ GF + +++ + +F ++ ++ + D F +I C D+ GS +H
Sbjct: 357 SVSWTVLIGGFLQYGCFSESVELFNQMRAEL-MAVDQFALATLISGCCNTMDICLGSQLH 415
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+ K G V VSN+LI+MY KC ++ +F M ER++VSW +I +S+ G
Sbjct: 416 SLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVG 472
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 33/210 (15%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ I + ++ Y+ G D+ +F + TR++ WN ++SG+ ++ + + L IFV +
Sbjct: 91 NVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMR 150
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAM------- 244
+ P+ FTF CV+K+CG + + G+ +K D V AL+ M
Sbjct: 151 QTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAM 210
Query: 245 ------------------------YGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
Y K V+ +++F+ MPER++VSWN +I S++G
Sbjct: 211 DFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSG 270
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ D+++ M G +G PD T + L
Sbjct: 271 RVREALDMVVDMHG--KGVRPDSTTYTSSL 298
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 86/172 (50%), Gaps = 5/172 (2%)
Query: 125 ASTQFSN----DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELY 180
AS QFS I ++ Y+ + +F S+ R++ WN ++S +K+
Sbjct: 213 ASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRV 272
Query: 181 TDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNA 240
+ L + V++ ++PD+ T+ + AC ++ + +G +H + D +V++A
Sbjct: 273 REALDMVVDMHGKG-VRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASA 331
Query: 241 LIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
++ +Y KC +E ++F + +RN VSW +I GF + G ES +L +M
Sbjct: 332 MVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQM 383
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 121/241 (50%), Gaps = 6/241 (2%)
Query: 69 EITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQ 128
E+ LC + L +AL LL+ + D ++A L + C + +E G R
Sbjct: 68 ELRALCSHGQ-LAQALWLLESSAEPPD-EDAYVALFRLCEWRRAVEPGLRACAHADDRHA 125
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
+ + +++M G + RVF + R++F WN +V G+ K L + L ++
Sbjct: 126 WFG-LRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYH 184
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
+ ++PD +TFPCV+++CGG+ D G VH + G +V V NAL+ MY KC
Sbjct: 185 RMMW-AGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKC 243
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
V K+F+ M + +SWN++I G ENG +L + M+ ++ P+++T+ +
Sbjct: 244 GDVVAARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTML--QDEVQPNLMTITS 301
Query: 309 V 309
V
Sbjct: 302 V 302
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 4/211 (1%)
Query: 84 LSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMY 143
L++LQ+ + +L T V + A G DI K +H L + F+ D LI MY
Sbjct: 285 LTMLQDEV-QPNLMTITSVTV-ASGLLSDITFAKEMHGL-AVKRGFATDVAFCNSLIQMY 341
Query: 144 SLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTF 203
+ G +R VF + TR+ W A++SG+ KN L ++ L + PD+ T
Sbjct: 342 ASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYA-LMEVNNVSPDDITI 400
Query: 204 PCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 263
+ AC + + G +H +A G + V V+NAL+ MY K +++ +++F+ MPE
Sbjct: 401 ASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPE 460
Query: 264 RNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
+++VSW+S+I GF N + E+ M+
Sbjct: 461 KDVVSWSSMIAGFCFNHRNFEALYYFRHMLA 491
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 99/201 (49%), Gaps = 11/201 (5%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+++G ++HEL + S F + ++ L+ MY+ + VF + +++ W+++++
Sbjct: 413 LDVGVKLHEL-AESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIA 471
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
GF N + L F + +D +KP++ TF + AC + G +H + G+
Sbjct: 472 GFCFNHRNFEALYYFRHMLAD--VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIA 529
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG---FSCESFDLL 289
+ ++ NALI +Y KC F +++VSWN +I GF +G + F+ +
Sbjct: 530 YEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQM 589
Query: 290 IKMMGCEEGFIPDVITVVTVL 310
+K+ C PD +T V +L
Sbjct: 590 VKIGEC-----PDEVTFVALL 605
>gi|15223858|ref|NP_177842.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215262|sp|Q3ECB8.1|PP128_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g77170
gi|332197823|gb|AEE35944.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 467
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 113/211 (53%), Gaps = 6/211 (2%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++++A D +GK +H V+ F D + IT+Y G ++R+VFD
Sbjct: 122 IVIKAAVQIHDFTLGKELHS-VAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPE 180
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R L WNA++ G + + +FV++ + L+PD+FT V +CGG+ D+
Sbjct: 181 RKLGSWNAIIGGLNHAGRANEAVEMFVDMKR-SGLEPDDFTMVSVTASCGGLGDLSLAFQ 239
Query: 222 VHG--MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H + AK D+ + N+LI MYGKC ++ +FE M +RN+VSW+S+I G++ N
Sbjct: 240 LHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAAN 299
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + E+ + +M E G P+ IT V VL
Sbjct: 300 GNTLEALECFRQMR--EFGVRPNKITFVGVL 328
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 10/181 (5%)
Query: 136 NTRLITMYSLCGFPLDSRRVF-DSLKTRNL------FQWNALVSGFTKNELYTDVLSIFV 188
N L T+ S C RR+ D ++R L F WN ++ + ++E D + +++
Sbjct: 47 NKLLATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYL 106
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
+ T L PD ++ P VIKA I D G +H +A ++G +GD F + I +Y K
Sbjct: 107 GMVRSTVL-PDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKA 165
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
E K+F+ PER L SWN+II G + G + E+ ++ + M G PD T+V+
Sbjct: 166 GEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMK--RSGLEPDDFTMVS 223
Query: 309 V 309
V
Sbjct: 224 V 224
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 120/239 (50%), Gaps = 7/239 (2%)
Query: 76 ESKSLNKALSLLQENLH-NADLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
E+ +AL L +E + N E T V +L AC IE+G+ +H LV F +
Sbjct: 192 ENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSL 251
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
I I +YS CG + +F+ L +++ WN L+ G+T LY + L +F E+
Sbjct: 252 KIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRS 311
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM--GLIGDVFVSNALIAMYGKCAFV 251
E P++ T V+ AC + + G +H K G+ + +LI MY KC +
Sbjct: 312 GE-SPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDI 370
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E ++F M ++L SWN++I GF+ +G + +FDL +M + G PD IT+V +L
Sbjct: 371 EAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMR--KNGIEPDDITLVGLL 427
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 8/216 (3%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFS----NDFIINTRLITMYSLCGFPLDSRRVF 156
G L H I + R L A F D + T LIT Y+ G +R+VF
Sbjct: 113 GCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVF 172
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
D + R++ WNA+++G+ +N Y + L +F E+ T ++PD T V+ AC +
Sbjct: 173 DXITERDVVSWNAMITGYVENCGYEEALELFKEMMR-TNVRPDEGTLVSVLSACAQSGSI 231
Query: 217 GFGSGVHGMA-AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
G +H + G + + NA I +Y KC VE LFE + +++VSWN++I G
Sbjct: 232 ELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGG 291
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ E+ L +M+ G P+ +T+++VLP
Sbjct: 292 YTHMNLYKEALLLFQEML--RSGESPNDVTMLSVLP 325
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 34/187 (18%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VF++ + NL WN ++ G + L ++V + S + P+ +TFP ++K+C
Sbjct: 39 VFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHV-PNAYTFPFLLKSCAKSK 97
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE--------------------- 253
G +H K+G D + +LI+MY + +E+
Sbjct: 98 TFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALIT 157
Query: 254 ----------MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
K+F+ + ER++VSWN++I G+ EN E+ +L +MM PD
Sbjct: 158 GYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMM--RTNVRPDE 215
Query: 304 ITVVTVL 310
T+V+VL
Sbjct: 216 GTLVSVL 222
>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Brachypodium distachyon]
Length = 689
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 120/226 (53%), Gaps = 17/226 (7%)
Query: 96 LKEATGV--------LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCG 147
L+EA G+ AC + +G++ H V + F D ++ ++ Y C
Sbjct: 206 LREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFV-VTCGFDMDVSVSNAMVDFYGKCR 264
Query: 148 FPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVI 207
+R VFD ++ RN W +++ + ++ D L++++ + +T +P +F V+
Sbjct: 265 CAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMG-ARNTGEEPTDFMVSSVL 323
Query: 208 KACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLV 267
C G+ + FG +H +A + + ++FV++AL+ MYGKC VE+ ++F MPERNLV
Sbjct: 324 TTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLV 383
Query: 268 SWNSIICGFSENGFSCES---FDLLIKMMGCEEGFIPDVITVVTVL 310
+WN++I G++ G + + FD +I+ G P+ IT+V V+
Sbjct: 384 TWNAMIGGYAHIGDAQNALAVFDAMIRSGGTS----PNHITLVNVI 425
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 3/232 (1%)
Query: 79 SLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
+L+ ++L+ L D + AC + +G ++H L D ++
Sbjct: 95 ALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYLPGDPFVSCA 154
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+ MY G +RR+F+ + RN+ WNA+++ + + + L + P
Sbjct: 155 AMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGLREAGGM-P 213
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ + AC G + G HG G DV VSNA++ YGKC + +F
Sbjct: 214 NVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVF 273
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ M RN VSW S+I ++++G E L + M G P V +VL
Sbjct: 274 DGMRVRNSVSWCSMIVAYAQHG--AEEDALAVYMGARNTGEEPTDFMVSSVL 323
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKA--CGGIADVGFGSGVHG 224
+ A +SG ++ LS F + L+P++FTFP KA C G +H
Sbjct: 79 FTAFISGAAQHARPLAALSAFAAMLR-VGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHA 137
Query: 225 MAAKMG-LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+A + G L GD FVS A + MY K + +LFE MP RN+++WN+++ +G
Sbjct: 138 LALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPL 197
Query: 284 ESFDLLIKMMGCEEGFIPDVITV 306
E+F + E G +P+V++V
Sbjct: 198 ETFKAYFGLR--EAGGMPNVVSV 218
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 5/174 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C + G+ +H + S +N F+ + L+ MY CG D+ +VF + R
Sbjct: 322 VLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASA-LVDMYGKCGGVEDAEQVFLDMPER 380
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
NL WNA++ G+ + L++F + P++ T VI AC GG+ G+
Sbjct: 381 NLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGY-E 439
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS-WNSII 273
M + G+ ++ + G+ E ++ + MP R +S W +++
Sbjct: 440 LFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALL 493
>gi|15232821|ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g47530
gi|6522536|emb|CAB61979.1| putative protein [Arabidopsis thaliana]
gi|62320272|dbj|BAD94558.1| hypothetical protein [Arabidopsis thaliana]
gi|332644772|gb|AEE78293.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 116/209 (55%), Gaps = 5/209 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+ C D+ G ++H + S F +D ++ T L+ +YS C D+ +VFD + R+
Sbjct: 120 LKCCIKSGDLLGGLQIHGKI-FSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRD 178
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTE--LKPDNFTFPCVIKACGGIADVGFGSG 221
WN L S + +N+ DVL +F ++ +D + +KPD T ++AC + + FG
Sbjct: 179 TVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQ 238
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH + GL G + +SN L++MY +C +++ ++F M ERN+VSW ++I G + NGF
Sbjct: 239 VHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGF 298
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + +M+ + G P+ T+ +L
Sbjct: 299 GKEAIEAFNEML--KFGISPEEQTLTGLL 325
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 5/198 (2%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLD---SRRVFDSLKTRNLFQWNALVSG 173
+++H L+ ++ N + + ++ +L P D S RVF L N ++
Sbjct: 28 RQIHALLLRTSLIRNSDVFH-HFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRA 86
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
F+ ++ + +F L ++ L + + +K C D+ G +HG G +
Sbjct: 87 FSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLS 146
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
D + L+ +Y C + K+F+ +P+R+ VSWN + + N + + L KM
Sbjct: 147 DSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMK 206
Query: 294 GCEEGFI-PDVITVVTVL 310
+G + PD +T + L
Sbjct: 207 NDVDGCVKPDGVTCLLAL 224
>gi|79506598|ref|NP_196000.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170265|sp|Q9FFN1.1|PP363_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g03800; AltName: Full=Protein EMBRYO DEFECTIVE 175
gi|9758009|dbj|BAB08606.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|26449508|dbj|BAC41880.1| unknown protein [Arabidopsis thaliana]
gi|58013014|gb|AAW62960.1| embryo-defective 175 [Arabidopsis thaliana]
gi|58013016|gb|AAW62961.1| embryo-defective 175 [Arabidopsis thaliana]
gi|332003273|gb|AED90656.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 896
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 118/214 (55%), Gaps = 13/214 (6%)
Query: 103 LLQACGHEKDIEIGKRVH----ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
LL+ D+E+ K VH +L T+ N LI+ Y GFP ++ VF S
Sbjct: 86 LLRLSAQYHDVEVTKAVHASFLKLREEKTRLGN------ALISTYLKLGFPREAILVFVS 139
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
L + + + AL+SGF++ L + L +F + ++P+ +TF ++ AC ++
Sbjct: 140 LSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSL 199
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGK--CAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G +HG+ K G + VFVSN+L+++Y K + ++++KLF+ +P+R++ SWN+++
Sbjct: 200 GIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSL 259
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ G S ++FDL +M EGF D T+ T+L
Sbjct: 260 VKEGKSHKAFDLFYEMNRV-EGFGVDSFTLSTLL 292
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 112/237 (47%), Gaps = 11/237 (4%)
Query: 78 KSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHEL-VSASTQFSNDFIIN 136
K+L +LQ + D + V ACG + ++ +++H + T F+ I
Sbjct: 400 KALKLFTDMLQRGVELTDFSLTSAV--DACGLVSEKKVSEQIHGFCIKFGTAFNP--CIQ 455
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNA---LVSGFTKNELYTDVLSIFVELSSD 193
T L+ M + C D+ +FD + NL A ++ G+ +N L +S+F +
Sbjct: 456 TALLDMCTRCERMADAEEMFDQWPS-NLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCE 514
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+L D + ++ CG + G +H A K G D+ + N+LI+MY KC ++
Sbjct: 515 QKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDD 574
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+K+F M E +++SWNS+I + E+ L +M E+ PD+IT+ V+
Sbjct: 575 AIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMN--EKEIKPDIITLTLVI 629
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 40/227 (17%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMY-----SLCGFPLDSRRVFD 157
+L AC +G ++H L+ S F N ++ L+++Y S C D ++FD
Sbjct: 187 ILTACVRVSRFSLGIQIHGLIVKSG-FLNSVFVSNSLMSLYDKDSGSSCD---DVLKLFD 242
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
+ R++ WN +VS K +F E++ D+FT ++ +C + +
Sbjct: 243 EIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLL 302
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGK------------------------------ 247
G +HG A ++GL+ ++ V+NALI Y K
Sbjct: 303 RGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYM 362
Query: 248 -CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
V+ V++F + E+N +++N+++ GF NG ++ L M+
Sbjct: 363 SFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDML 409
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 20/191 (10%)
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKN-------ELYTD 182
+ D + T +IT Y G + +F ++ +N +NAL++GF +N +L+TD
Sbjct: 348 AQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTD 407
Query: 183 VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALI 242
+L VEL+ +F+ + ACG +++ +HG K G + + AL+
Sbjct: 408 MLQRGVELT--------DFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALL 459
Query: 243 AMYGKCAFVEEMVKLFEVMPERNLVS---WNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
M +C + + ++F+ P NL S SII G++ NG ++ L + + CE+
Sbjct: 460 DMCTRCERMADAEEMFDQWPS-NLDSSKATTSIIGGYARNGLPDKAVSLFHRTL-CEQKL 517
Query: 300 IPDVITVVTVL 310
D +++ +L
Sbjct: 518 FLDEVSLTLIL 528
>gi|297741541|emb|CBI32673.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 95/160 (59%), Gaps = 3/160 (1%)
Query: 151 DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
D+ +F + RN+ WNA++SG+++ + +++FV + + L P+ TFPC I A
Sbjct: 476 DALALFRKMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGTL-PNERTFPCAISAV 534
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
IA +G G HG A K DVF+ N+L++ Y KC +EE + +F +P++N+VSWN
Sbjct: 535 ANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVSFYAKCGSMEESLLVFNTLPKKNIVSWN 594
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ICG++ +G E+ KM + G P+ +T++ +L
Sbjct: 595 ALICGYANHGRGMEAIYFFEKMQ--DTGLRPNSVTLLGLL 632
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 34/203 (16%)
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
I+ ++ YS D+ ++FD + ++ A + F + + + + F + +
Sbjct: 327 ILEPDIVCSYSASKALWDACKLFDEVPNWDVVSATATIGCFARYHHHEEAIYFFSRMLA- 385
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+KP+ F+F VI + + D+ G +H A KMGL +VFV +A++ Y K + E
Sbjct: 386 LNIKPNQFSFGTVIPSSTALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYAKLTSINE 445
Query: 254 MVK-------------------------------LFEVMPERNLVSWNSIICGFSENGFS 282
K LF MPERN+VSWN++I G+S+ G++
Sbjct: 446 AQKAFEDTHEPNVVSYTTLIRGYLKKERFDDALALFRKMPERNVVSWNAMISGYSQMGYN 505
Query: 283 CESFDLLIKMMGCEEGFIPDVIT 305
E+ +L + M+ EG +P+ T
Sbjct: 506 EEAVNLFVVML--REGTLPNERT 526
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I L++ Y+ CG +S VF++L +N+ WNAL+ G+ + + + F E
Sbjct: 558 DVFIGNSLVSFYAKCGSMEESLLVFNTLPKKNIVSWNALICGYANHGRGMEAI-YFFEKM 616
Query: 192 SDTELKPDNFTFPCVIKAC--GGIADVGF 218
DT L+P++ T ++ AC G+ D G+
Sbjct: 617 QDTGLRPNSVTLLGLLLACNHSGLVDKGY 645
>gi|357475145|ref|XP_003607858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508913|gb|AES90055.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 708
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 120/243 (49%), Gaps = 6/243 (2%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADLKEATGVL--LQACGHEKDIEIGKRVHELVSAST 127
I T C + ++AL LL + L + + L+ACG K + G ++H +
Sbjct: 322 IITACSQHGLGHEALLLLSQMLVDGFFPNEYTICAALKACGENKAFKCGTQLHGAIVKKI 381
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
S D I T LI MY+ CG + S++VFD +K RN W +++SG+ +N + L+ F
Sbjct: 382 CKS-DVFIGTSLIDMYAKCGEIVSSKKVFDRMKVRNTATWTSIISGYARNGFGEEALNFF 440
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
L ++ + T CV+ ACG I G VH K ++ ++++ L+ Y +
Sbjct: 441 -RLMKRKKVYVNKSTLVCVMTACGTIKASLIGREVHAQKIKSVILTNMYIETTLVWFYCR 499
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
C + + +P R++VSW +II G + G E+ + L +MM EEG +P+ T
Sbjct: 500 CKDYSHAFNVLKYIPLRDVVSWTAIISGCARLGLETEALEFLREMM--EEGVLPNSYTYS 557
Query: 308 TVL 310
+ L
Sbjct: 558 SAL 560
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ ACG K IG+ VH S +N +I T L+ Y C + V + R
Sbjct: 458 VMTACGTIKASLIGREVHAQKIKSVILTNMYI-ETTLVWFYCRCKDYSHAFNVLKYIPLR 516
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W A++SG + L T+ L E+ + L P+++T+ +KAC +
Sbjct: 517 DVVSWTAIISGCARLGLETEALEFLREMMEEGVL-PNSYTYSSALKACAKL--------- 566
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ + +VFV++ALI MY KC ++ + ++F+ MPERNLVSW ++I G++ NG
Sbjct: 567 -----ETPALSNVFVNSALIYMYAKCGYIADAFQVFDNMPERNLVSWKAMILGYARNGHC 621
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L+ +M EGF+ D + TVL
Sbjct: 622 RKALQLMYRMRA--EGFVVDDYILTTVL 647
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 94/190 (49%), Gaps = 3/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ C D+ +GK++H + S + I+++ ++ YS CG + R FD + R
Sbjct: 257 FMNLCCKRVDLALGKQIHARILKSNW--RNLIVDSAVVNFYSKCGKISSAFRTFDRMAKR 314
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +++ +++ L + L + ++ D P+ +T +KACG G+ +
Sbjct: 315 DVVCWTTIITACSQHGLGHEALLLLSQMLVDGFF-PNEYTICAALKACGENKAFKCGTQL 373
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K DVF+ +LI MY KC + K+F+ M RN +W SII G++ NGF
Sbjct: 374 HGAIVKKICKSDVFIGTSLIDMYAKCGEIVSSKKVFDRMKVRNTATWTSIISGYARNGFG 433
Query: 283 CESFDLLIKM 292
E+ + M
Sbjct: 434 EEALNFFRLM 443
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 97/199 (48%), Gaps = 5/199 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
D+E RVH + + S+ ++ N LI Y G +R+VFD + RN W A++
Sbjct: 165 DVEEVGRVHTIALKCFRGSSTYVDNN-LICSYLRLGKLAQARKVFDGMSRRNTVTWTAII 223
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
G+ K +L + +F S ++P++ F C + C D+ G +H K
Sbjct: 224 DGYLKYDLDDEAFKLF-HGSIKHGVQPNSKMFVCFMNLCCKRVDLALGKQIHARILKSNW 282
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
++ V +A++ Y KC + + F+ M +R++V W +II S++G E+ LL +
Sbjct: 283 -RNLIVDSAVVNFYSKCGKISSAFRTFDRMAKRDVVCWTTIITACSQHGLGHEALLLLSQ 341
Query: 292 MMGCEEGFIPDVITVVTVL 310
M+ +GF P+ T+ L
Sbjct: 342 ML--VDGFFPNEYTICAAL 358
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
SN F+ N+ LI MY+ CG+ D+ +VFD++ RNL W A++ G+ +N L +
Sbjct: 571 LSNVFV-NSALIYMYAKCGYIADAFQVFDNMPERNLVSWKAMILGYARNGHCRKALQLMY 629
Query: 189 ELSSDTELKPDNFTFPCVIKACGGI 213
+ ++ D++ V+ ACGGI
Sbjct: 630 RMRAEG-FVVDDYILTTVLTACGGI 653
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 2/185 (1%)
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
S+ D + T +IT YS G + +R FD + TRN WNA++ + ++ D L
Sbjct: 430 SSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLK 489
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
++ + S ++ PD T+ + + C I G + G K GLI +V V+NA I MY
Sbjct: 490 MYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMY 549
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
KC + E KLF+++ +++VSWN++I G+S++G ++ M+ +G PD I+
Sbjct: 550 SKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDML--SKGAKPDYIS 607
Query: 306 VVTVL 310
V VL
Sbjct: 608 YVAVL 612
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 6/208 (2%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVL---LQACGHEKDIEIGKRVHELVSASTQFSND 132
+S + +AL L+ E +H ++ + L AC + GK++H V S +
Sbjct: 247 QSGRVREALGLVVE-MHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 305
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
++ + LI +Y+ CG +++RVF+SL+ RN W L+ G + E ++ + +F ++ +
Sbjct: 306 YVASA-LIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRA 364
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ + D F +I C D+ G +H + K G + VSN+LI++Y KC ++
Sbjct: 365 EL-MAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQ 423
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENG 280
+F M ER++VSW S+I +S+ G
Sbjct: 424 NAEFVFSSMSERDIVSWTSMITAYSQIG 451
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 31/192 (16%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ I + ++ Y+ G D+ +FD + R++ WN L+SG+ + + D L FV +
Sbjct: 70 NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ P+ FTF CV+K+CG + + G+ K GD V AL+ M+ +C +V
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV 189
Query: 252 -------------------------------EEMVKLFEVMPERNLVSWNSIICGFSENG 280
+ ++ FE M ER++VSWN +I S++G
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249
Query: 281 FSCESFDLLIKM 292
E+ L+++M
Sbjct: 250 RVREALGLVVEM 261
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
F+ + R++ WN +++ +++ + L + VE+ ++ D+ T+ + AC +
Sbjct: 227 FEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKG-VRLDSTTYTSSLTACARLFS 285
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
+G+G +H + D +V++ALI +Y KC +E ++F + +RN VSW +I G
Sbjct: 286 LGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGG 345
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV-MPER 264
+++CG + +HG +GL VF+ N L+ Y C + + +L + E
Sbjct: 10 ALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEP 69
Query: 265 NLVSWNSIICGFSENGFSCESFDLLIKM 292
N+++ N ++ G+++ G ++ +L +M
Sbjct: 70 NVITHNIMMNGYAKQGSLSDAEELFDRM 97
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 2/185 (1%)
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
S+ D + T +IT YS G + +R FD + TRN WNA++ + ++ D L
Sbjct: 430 SSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLK 489
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
++ + S ++ PD T+ + + C I G + G K GLI +V V+NA I MY
Sbjct: 490 MYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMY 549
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
KC + E KLF+++ +++VSWN++I G+S++G ++ M+ +G PD I+
Sbjct: 550 SKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDML--SKGAKPDYIS 607
Query: 306 VVTVL 310
V VL
Sbjct: 608 YVAVL 612
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 6/208 (2%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVL---LQACGHEKDIEIGKRVHELVSASTQFSND 132
+S + +AL L+ E +H ++ + L AC + GK++H V S +
Sbjct: 247 QSGRVREALGLVVE-MHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 305
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
++ + LI +Y+ CG +++RVF+SL+ RN W L+ G + E ++ + +F ++ +
Sbjct: 306 YVASA-LIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRA 364
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ + D F +I C D+ G +H + K G + VSN+LI++Y KC ++
Sbjct: 365 EL-MAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQ 423
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENG 280
+F M ER++VSW S+I +S+ G
Sbjct: 424 NAEFVFSSMSERDIVSWTSMITAYSQIG 451
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 31/192 (16%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ I + ++ Y+ G D+ +FD + R++ WN L+SG+ + + D L FV +
Sbjct: 70 NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ P+ FTF CV+K+CG + + G+ K GD V AL+ M+ +C +V
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV 189
Query: 252 -------------------------------EEMVKLFEVMPERNLVSWNSIICGFSENG 280
+ ++ FE M ER++VSWN +I S++G
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249
Query: 281 FSCESFDLLIKM 292
E+ L+++M
Sbjct: 250 RVREALGLVVEM 261
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
F+ + R++ WN +++ +++ + L + VE+ ++ D+ T+ + AC +
Sbjct: 227 FEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKG-VRLDSTTYTSSLTACARLFS 285
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
+G+G +H + D +V++ALI +Y KC +E ++F + +RN VSW +I G
Sbjct: 286 LGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGG 345
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV-MPER 264
+++CG + +HG +GL VF+ N L+ Y C + + +L + E
Sbjct: 10 ALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEP 69
Query: 265 NLVSWNSIICGFSENGFSCESFDLLIKM 292
N+++ N ++ G+++ G ++ +L +M
Sbjct: 70 NVITHNIMMNGYAKQGSLSDAEELFDRM 97
>gi|147859488|emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera]
Length = 795
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 95/160 (59%), Gaps = 3/160 (1%)
Query: 151 DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
D+ +F + RN+ WNA++SG+++ + +++FV + + L P+ TFPC I A
Sbjct: 452 DALALFRXMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGXL-PNERTFPCAISAV 510
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
IA +G G HG A K DVF+ N+L++ Y KC +EE + +F +P++N+VSWN
Sbjct: 511 ANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVSFYAKCGSMEESLLVFNTLPKKNIVSWN 570
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ICG++ +G E+ KM + G P+ +T++ +L
Sbjct: 571 ALICGYANHGRGMEAIYFFEKMQ--DTGLRPNSVTLLGLL 608
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 34/203 (16%)
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
I+ ++ YS D+ ++FD + ++ A + F + + + + F + +
Sbjct: 303 ILEPDIVCSYSASKELWDACKLFDEVPNWDVVSATATIGCFARYHHHEEAIYFFSRMLA- 361
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+KP+ F+F VI + + D+ G +H A KMGL +VFV +A++ Y K + E
Sbjct: 362 LNIKPNQFSFGTVIPSATALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYAKLTSINE 421
Query: 254 MVK-------------------------------LFEVMPERNLVSWNSIICGFSENGFS 282
K LF MPERN+VSWN++I G+S+ G++
Sbjct: 422 AQKAFEDTHEPNVVSYTTLIRGYLKKERFDDALALFRXMPERNVVSWNAMISGYSQMGYN 481
Query: 283 CESFDLLIKMMGCEEGFIPDVIT 305
E+ +L + M+ EG +P+ T
Sbjct: 482 EEAVNLFVVML--REGXLPNERT 502
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I L++ Y+ CG +S VF++L +N+ WNAL+ G+ + + + F E
Sbjct: 534 DVFIGNSLVSFYAKCGSMEESLLVFNTLPKKNIVSWNALICGYANHGRGMEAI-YFFEKM 592
Query: 192 SDTELKPDNFTFPCVIKACG--GIADVGF 218
DT L+P++ T ++ AC G+ D G+
Sbjct: 593 QDTGLRPNSVTLLGLLLACNHSGLVDKGY 621
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 128/237 (54%), Gaps = 13/237 (5%)
Query: 81 NKALSLLQENLH---NADLKEATGVLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIIN 136
+KAL L QE + N D+ VL E D+ G + H +L+ T F + +
Sbjct: 222 SKALGLFQEMVRRGLNVDMFTLASVLTAFTCLE-DLSGGLQFHGQLIK--TGFHQNSHVG 278
Query: 137 TRLITMYSLCGFPL-DSRRVFDSLKTRNLFQWNALVSGFTKNELY-TDVLSIFVELSSDT 194
+ LI +YS CG + D R+VF+ + +L WN +VSG+++NE + D L F ++
Sbjct: 279 SGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQG-I 337
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD-VFVSNALIAMYGKCAFVEE 253
+P++ +F CVI AC ++ G +H +A K + + + V NALIAMY KC +++
Sbjct: 338 GYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQD 397
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+LF+ M E N VS NS+I G++++G ES L M+ E P IT ++VL
Sbjct: 398 ARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWML--ERQIAPTSITFISVL 452
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 46/244 (18%)
Query: 103 LLQACGHEKDIEIGKRVHEL-----VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
LL+ C E+D+ GK +H L + ST FSN FI+ +YS CG +R+ F
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFIL------LYSKCGRLAWARKAFQ 67
Query: 158 SLKTRNLFQWNALVSGFTKNEL------------------YTDVLSIFVELSS------- 192
+ N+F +NA+++ + K Y ++S + +
Sbjct: 68 DISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGL 127
Query: 193 -----DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+ L D FT VI AC DVG +H +A G V V+NAL+ YGK
Sbjct: 128 FSGMREMGLDMDXFTLSAVITAC--CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGK 185
Query: 248 CAFVEEMVKLFEVMPE-RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
+++ ++F M R+ VSWNS+I + ++ ++ L +M+ G D+ T+
Sbjct: 186 NGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMV--RRGLNVDMFTL 243
Query: 307 VTVL 310
+VL
Sbjct: 244 ASVL 247
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 3/180 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC + GK++H L S SN ++ LI MYS CG D+RR+FD +
Sbjct: 349 VISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEH 408
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N N++++G+ ++ + + L +F + + ++ P + TF V+ AC V G
Sbjct: 409 NTVSLNSMIAGYAQHGIEMESLHLF-QWMLERQIAPTSITFISVLSACAHTGRVEEGWNY 467
Query: 223 HG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENG 280
M K + + + +I + G+ + E L MP + W S++ +G
Sbjct: 468 FNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHG 527
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%)
Query: 203 FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
F ++K C D+ G +H + K + + SN I +Y KC + K F+ +
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 263 ERNLVSWNSIICGFSE 278
+ N+ S+N+II +++
Sbjct: 71 DPNVFSFNAIIAAYAK 86
>gi|302816264|ref|XP_002989811.1| hypothetical protein SELMODRAFT_130525 [Selaginella moellendorffii]
gi|300142377|gb|EFJ09078.1| hypothetical protein SELMODRAFT_130525 [Selaginella moellendorffii]
Length = 756
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 111/212 (52%), Gaps = 7/212 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL C D+ G++VH+ AS + N ++ MY C ++RRVF+SLK +
Sbjct: 134 LLDCCASFADLRRGRQVHQCAVASGMDLLPTVANC-VVNMYGKCDDLEEARRVFESLKRK 192
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTE-LKPDNFTFPCVIKACGGIADVGFGSG 221
N W++LV+ + +N T+ + +F + D E LKPD T V+ ACG + S
Sbjct: 193 NEISWSSLVAAYAQNNQATEAMKLFQHM--DLEGLKPDRVTLISVLDACGDLRASKQSSQ 250
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE--RNLVSWNSIICGFSEN 279
+H + L DV V+NAL++MYGK +E+ +FE M E R++++WN++I ++
Sbjct: 251 IHARVLEADLERDVVVANALVSMYGKLGRLEQATVIFETMGEKSRDVIAWNAMISAYAHT 310
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G +F + ++M E P T+ +L
Sbjct: 311 GHHTRAFGIF-RIMLLEAAVTPSAATISAILA 341
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 34/239 (14%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C +E GKR+H N F+ N LI MY CG ++R++ D ++
Sbjct: 1 MLDWCVRLGALEAGKRIHRHSVECGMGKNRFVENL-LINMYGKCGALEEARKILDGMEDS 59
Query: 163 NLFQWNALVSGFTKNELYT------------DVLSIFVELSS------------------ 192
N+F W +++ + +N L + DV+S LS+
Sbjct: 60 NVFSWTIMLAAYAQNGLDSAKRVFDLSHAKRDVVSWNSMLSTCSQNEQGIQGTWELFQQM 119
Query: 193 DTE-LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
D E +PD TF ++ C AD+ G VH A G+ V+N ++ MYGKC +
Sbjct: 120 DLEGFQPDRVTFVTLLDCCASFADLRRGRQVHQCAVASGMDLLPTVANCVVNMYGKCDDL 179
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
EE ++FE + +N +SW+S++ +++N + E+ L M EG PD +T+++VL
Sbjct: 180 EEARRVFESLKRKNEISWSSLVAAYAQNNQATEAMKLFQHMD--LEGLKPDRVTLISVL 236
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 114/219 (52%), Gaps = 27/219 (12%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYS-------------------LCGFPLDS 152
D+++G+R+H + A+ + ++ I++T L+ MYS CG D+
Sbjct: 441 DLDLGRRLHAGI-ATARLASRLIVDTALVGMYSRCGSLGDAAAVFEGMEDRDTCGSLGDA 499
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
+ VFD + ++ WN+++S + + Y D ++ + + + +PD T + A
Sbjct: 500 KLVFDRIPDKDAVSWNSMISAYAHHGRYKDAIATYRAM----DCRPDEATIVSALAAASA 555
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
+AD+ G+ +H A ++G I V + L +M+ KC ++ + LFE E++LVSWN++
Sbjct: 556 LADLDEGAAIHARALELG-IATPAVESTLASMHAKCGSLDAAMALFEKNREKDLVSWNAM 614
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ ++++G E+ L+ +M EG P+ +T+ VL
Sbjct: 615 VAAYAQHGDGSEALALIHRME--LEGISPNGVTLSGVLA 651
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 12/212 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL--K 160
+L ACG + + ++H V D ++ L++MY G + +F+++ K
Sbjct: 235 VLDACGDLRASKQSSQIHARV-LEADLERDVVVANALVSMYGKLGRLEQATVIFETMGEK 293
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+R++ WNA++S + +T IF + + + P T ++ AC D+G G
Sbjct: 294 SRDVIAWNAMISAYAHTGHHTRAFGIFRIMLLEAAVTPSAATISAILAAC---LDLGSGR 350
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKC-AFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H +AA +G+ V+ +L+ MY +C + + LF M ++LV+WN++I ++
Sbjct: 351 RIHCLAASIGVESHPSVAISLLGMYSRCSSSITSARALFLGMERKSLVAWNTMIAACAQR 410
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G + E+ +L K M E PD T ++L
Sbjct: 411 GLAAEAQELF-KAMDVE----PDGFTFASLLA 437
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 126/253 (49%), Gaps = 12/253 (4%)
Query: 70 ITTLCEESKSLNKALSLLQEN-LHNADLKEAT-GVLLQACGHEKDIEIGKRVHELVSAST 127
+++LC+ + L +AL L+E L + E T +L AC H + + GK +H +
Sbjct: 187 LSSLCQNEQLL-EALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 245
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
+ + + L+ MY C L RRVFD + R + WNA+++G+++NE + L +F
Sbjct: 246 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 305
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+ + L ++ T V+ AC +HG K GL D FV N L+ MY +
Sbjct: 306 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSR 365
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEE---------G 298
++ +++F M +R+LV+WN++I G+ + ++ LL KM E
Sbjct: 366 LGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS 425
Query: 299 FIPDVITVVTVLP 311
P+ IT++T+LP
Sbjct: 426 LKPNSITLMTILP 438
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 119 VHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNE 178
+H V + F+ NT L+ MYS G + R+F ++ R+L WN +++G+ +E
Sbjct: 340 IHGFVVKRGLDRDRFVQNT-LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSE 398
Query: 179 LYTDVLSIFVEL----------SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK 228
+ D L + ++ +S LKP++ T ++ +C ++ + G +H A K
Sbjct: 399 HHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK 458
Query: 229 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
L DV V +AL+ MY KC ++ K+F+ +P++N+++WN II + +G E+ DL
Sbjct: 459 NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDL 518
Query: 289 LIKMMGCEEGFIPDVITVVTV 309
L MM +G P+ +T ++V
Sbjct: 519 LRMMM--VQGVKPNEVTFISV 537
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 7/212 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+A +D+E+GK++H V + + L+ +Y CG +VFD + R
Sbjct: 16 LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER 75
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI---ADVGFG 219
N WN+L+S E + L F D ++P +FT V+ AC + + G
Sbjct: 76 NQVSWNSLISSLCSFEKWEMALEAF-RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMG 134
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
VH + G + + F+ N L+AMYGK + L R+LV+WN+++ +N
Sbjct: 135 KQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN 193
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ + L +M+ EG PD T+ +VLP
Sbjct: 194 EQLLEALEYLREMV--LEGVEPDEFTISSVLP 223
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 9/119 (7%)
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL-IGDVFVSNALIAMYGKCAFVEEM 254
+KPDN+ FP ++KA + D+ G +H K G + V V+N L+ +Y KC +
Sbjct: 6 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 65
Query: 255 VKLFEVMPERNLVSWNSII---CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F+ + ERN VSWNS+I C F + + E+F ++ +E P T+V+V+
Sbjct: 66 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML-----DENVEPSSFTLVSVV 119
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 128/237 (54%), Gaps = 13/237 (5%)
Query: 81 NKALSLLQENLH---NADLKEATGVLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIIN 136
+KAL L QE + N D+ VL E D+ G + H +L+ T F + +
Sbjct: 222 SKALGLFQEMVRRGLNVDMFTLASVLTAFTCLE-DLSGGLQFHGQLIK--TGFHQNSHVG 278
Query: 137 TRLITMYSLCGFPL-DSRRVFDSLKTRNLFQWNALVSGFTKNELY-TDVLSIFVELSSDT 194
+ LI +YS CG + D R+VF+ + +L WN +VSG+++NE + D L F ++
Sbjct: 279 SGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQG-I 337
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD-VFVSNALIAMYGKCAFVEE 253
+P++ +F CVI AC ++ G +H +A K + + + V NALIAMY KC +++
Sbjct: 338 GYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQD 397
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+LF+ M E N VS NS+I G++++G ES L M+ E P IT ++VL
Sbjct: 398 ARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWML--ERQIAPTSITFISVL 452
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 46/244 (18%)
Query: 103 LLQACGHEKDIEIGKRVHEL-----VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
LL+ C E+D+ GK +H L + ST FSN FI+ +YS CG +R+ F
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFIL------LYSKCGRLAWARKAFQ 67
Query: 158 SLKTRNLFQWNALVSGFTKNEL------------------YTDVLSIFVELSS------- 192
+ N+F +NA+++ + K Y ++S + +
Sbjct: 68 DISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGL 127
Query: 193 -----DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+ L D FT VI AC DVG +H +A G V V+NAL+ YGK
Sbjct: 128 FSGMREMGLDMDGFTLSAVITAC--CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGK 185
Query: 248 CAFVEEMVKLFEVMPE-RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
+++ ++F M R+ VSWNS+I + ++ ++ L +M+ G D+ T+
Sbjct: 186 NGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMV--RRGLNVDMFTL 243
Query: 307 VTVL 310
+VL
Sbjct: 244 ASVL 247
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 3/180 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC + GK++H L S SN ++ LI MYS CG D+RR+FD +
Sbjct: 349 VISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEH 408
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N N++++G+ ++ + + L +F + + ++ P + TF V+ AC V G
Sbjct: 409 NTVSLNSMIAGYAQHGIEMESLHLF-QWMLERQIAPTSITFISVLSACAHTGRVEEGWNY 467
Query: 223 HG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENG 280
M K + + + +I + G+ + E L MP + W S++ +G
Sbjct: 468 FNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHG 527
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%)
Query: 203 FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
F ++K C D+ G +H + K + + SN I +Y KC + K F+ +
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 263 ERNLVSWNSIICGFSE 278
+ N+ S+N+II +++
Sbjct: 71 DPNVFSFNAIIAAYAK 86
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 109/209 (52%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC + + G+ VH S+ ++ NT L+ MY++C +R+VFD+ R
Sbjct: 131 VLKACAESRAVREGEEVHGQAIKMGLASDVYVSNT-LMRMYAVCDVIRSARKVFDTSPQR 189
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L W ++ G+ K + + +F E+ + L+ D T V+ +C + D+ G +
Sbjct: 190 DLVSWTTMIQGYVKMGFAREGVGLFFEMCGEN-LQADGMTLVIVLSSCARLGDLRLGRKL 248
Query: 223 HGMAAKMGLIG-DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
H + + DVFV NAL+ MY KC K+F+ MP +N+VSWNS+I G ++ G
Sbjct: 249 HRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQ 308
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
ES + KM G PD +T+V VL
Sbjct: 309 FKESLYMFRKMQ--RLGVKPDDVTLVAVL 335
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 112/211 (53%), Gaps = 7/211 (3%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++L +C D+ +G+++H + ++ + D + L+ MY CG +R+VF +
Sbjct: 231 IVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPV 290
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N+ WN+++SG + + + L +F ++ +KPD+ T V+ +C + + G
Sbjct: 291 KNVVSWNSMISGLAQKGQFKESLYMFRKMQR-LGVKPDDVTLVAVLNSCANLGVLELGKW 349
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH + + D F+ NAL+ MY KC +++ +F+ M +++ S+ ++I G + +G
Sbjct: 350 VHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQ 409
Query: 282 SCESFDLLIKM--MGCEEGFIPDVITVVTVL 310
++ DL +M MG E PD +T V VL
Sbjct: 410 GGKALDLFSEMPKMGIE----PDEVTFVGVL 436
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 112/214 (52%), Gaps = 16/214 (7%)
Query: 104 LQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCG--FPLDSRRVFD--- 157
LQ C K I+ K++H ++ I+TRL +LC P+D R
Sbjct: 29 LQTC---KSIKGLKQIHASIIKTMPSPDAQLTISTRL---SALCAQSLPIDPRYALSLLA 82
Query: 158 SLKTRNLFQWNALVSGF-TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
L+T NL +NA++ G T N + L ++ ++ S + PDN+T P V+KAC V
Sbjct: 83 QLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKG-IVPDNYTIPFVLKACAESRAV 141
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G VHG A KMGL DV+VSN L+ MY C + K+F+ P+R+LVSW ++I G+
Sbjct: 142 REGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGY 201
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ GF+ E L +M C E D +T+V VL
Sbjct: 202 VKMGFAREGVGLFFEM--CGENLQADGMTLVIVL 233
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 3/161 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +C + +E+GK VH + Q D I L+ MY+ CG + VF ++ +
Sbjct: 334 VLNSCANLGVLELGKWVHAYLD-RNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRK 392
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+++ + A++ G + L +F E+ ++PD TF V+ AC + V G
Sbjct: 393 DVYSYTAMIVGLAMHGQGGKALDLFSEMPK-MGIEPDEVTFVGVLTACSHVGLVEEGRKY 451
Query: 223 -HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
M+ L + ++ + G+ + E + MP
Sbjct: 452 FEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMP 492
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 97/170 (57%), Gaps = 4/170 (2%)
Query: 142 MYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF 201
MY CG LD+ +FD + R++F WNA++ G+ N L ++ E+ + D++
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRH-LGVSFDSY 59
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
TFP ++KACG + D+ G+ +HG+A K G VFV N+L+A+Y KC + KLF+ M
Sbjct: 60 TFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRM 119
Query: 262 PERN-LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
RN +VSWNSII +S NG E+ L +M+ + G + + T L
Sbjct: 120 YVRNDVVSWNSIISAYSGNGMCTEALCLFSEML--KAGVVTNTYTFAAAL 167
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 117/210 (55%), Gaps = 5/210 (2%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
VLL+ACG +D+ G +H L S F++N+ L+ +Y+ C +R++FD +
Sbjct: 63 VLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNS-LVALYAKCNDINGARKLFDRMYV 121
Query: 162 RN-LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN + WN+++S ++ N + T+ L +F E+ + + +TF ++AC + + G
Sbjct: 122 RNDVVSWNSIISAYSGNGMCTEALCLFSEMLK-AGVVTNTYTFAAALQACEDSSFIKLGM 180
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H K G + DV+V+NAL+AMY + + E +F + +++V+WNS++ GF +NG
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + + + PD +++++++
Sbjct: 241 LYSEALEFFYDLQNAD--LKPDQVSIISII 268
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 112/207 (54%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
LQAC I++G ++H + S + + ++ N L+ MY G ++ +F +L+ ++
Sbjct: 167 LQACEDSSFIKLGMQIHAAILKSGRVLDVYVANA-LVAMYVRFGKMPEAAVIFGNLEGKD 225
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN++++GF +N LY++ L F +L + +LKPD + +I A G + + G +H
Sbjct: 226 IVTWNSMLTGFIQNGLYSEALEFFYDLQ-NADLKPDQVSIISIIVASGRLGYLLNGKEIH 284
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
A K G ++ V N LI MY KC + + F++M ++L+SW + G+++N
Sbjct: 285 AYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYL 344
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +LL ++ EG D + ++L
Sbjct: 345 QALELLRQLQ--MEGMDVDATMIGSIL 369
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 123/238 (51%), Gaps = 9/238 (3%)
Query: 76 ESKSLNKALSLLQE-NLHNADLKEA-TGVLLQACGHEKDIEIGKRVHELVSASTQFS-ND 132
++K +AL LL++ + D+ G +L AC + + ++ E+ + + +D
Sbjct: 339 QNKCYLQALELLRQLQMEGMDVDATMIGSILLAC---RGLNCLGKIKEIHGYTIRGGLSD 395
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
++ +I +Y CG + R+F+S++ +++ W +++S + N L L +F +
Sbjct: 396 PVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMK- 454
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+T L+PD T ++ A ++ + G +HG + G I + +SN L+ MY +C VE
Sbjct: 455 ETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVE 514
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ K+F RNL+ W ++I + +G+ + +L ++M +E IPD IT + +L
Sbjct: 515 DAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMK--DEKIIPDHITFLALL 570
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK +H + I NT L+ MY+ CG D+ ++F K RNL W A++S +
Sbjct: 481 GKEIHGFIIRKGFILEGSISNT-LVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYG 539
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
+ + +F+ + D ++ PD+ TF ++ AC
Sbjct: 540 MHGYGEAAVELFMRMK-DEKIIPDHITFLALLYAC 573
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 95/168 (56%), Gaps = 2/168 (1%)
Query: 143 YSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFT 202
Y+ G + R+F+ + RN+F WNAL+ G+T+N +++VLS F + D + P++ T
Sbjct: 189 YASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDAT 248
Query: 203 FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
V+ AC + + G VH A G G+V+V NAL+ MY KC VE + +F+ M
Sbjct: 249 LVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMD 308
Query: 263 ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++L+SWN+II G + +G ++ +L M E PD IT + +L
Sbjct: 309 NKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGEN--PDGITFIGIL 354
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
Query: 151 DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
++ +VFD + N WNA+ G+++NE + DV+ +F ++ ++ P+ FTFP ++K+C
Sbjct: 3 NAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKG-LDVMPNCFTFPVILKSC 61
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
I + G VH K G + FV+ LI MY + ++F M ERN+++W
Sbjct: 62 VKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWT 121
Query: 271 SIICGF 276
++I G+
Sbjct: 122 AMINGY 127
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 11/209 (5%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V+L++C ++ G+ VH V S +N F+ T LI MY+ G + RVF +
Sbjct: 56 VILKSCVKINALKEGEEVHCFVIKSGFRANPFVATT-LIDMYASGGAIHAAYRVFGEMIE 114
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
RN+ W A+++G+ +F +L+ + ++ N I+A I
Sbjct: 115 RNVIAWTAMINGYITCCDLVTARRLF-DLAPERDIVLWNTMISGYIEAKDVIR------- 166
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+ KM DV N ++ Y V +LFE MPERN+ SWN++I G++ NG
Sbjct: 167 ARELFDKMP-NKDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGC 225
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E +M+ + +P+ T+V VL
Sbjct: 226 FSEVLSAFKRML-VDGTVVPNDATLVNVL 253
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 6/174 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +++GK VH + + S + + + L+ MY+ CG + VF S+ +
Sbjct: 252 VLSACARLGALDLGKWVH-VYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMDNK 310
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGS 220
+L WN ++ G + D L++F + E PD TF ++ AC G+ + GF S
Sbjct: 311 DLISWNTIIGGLAVHGHGADALNLFSHMKIAGE-NPDGITFIGILCACTHMGLVEDGF-S 368
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
M ++ + ++ + G+ + V MP E + V W +++
Sbjct: 369 YFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALL 422
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 15/224 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC H + +++GK +H V + + + + L+ MY C RRVFD + R
Sbjct: 303 VLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGR 362
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA++SG+ +N L L +F+E+ L P+ T V+ AC +
Sbjct: 363 RIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESI 422
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A K+G D +V NAL+ MY + ++ +F+ M R+ VSWN++I G+ +G
Sbjct: 423 HGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRY 482
Query: 283 CESFDLLIKMMGCEEG---------------FIPDVITVVTVLP 311
+ LL +M E + P+ IT++TVLP
Sbjct: 483 SNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLP 526
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 7/213 (3%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+A +D++ G+++H S+ + L+ MY CG D +VFD +
Sbjct: 97 AVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITD 156
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC---GGIADVGF 218
R+ WN+ ++ + E + L F + + ++ +FT V AC G + +
Sbjct: 157 RDQVSWNSFIAALCRFEKWEQALEAFRAMQMEN-MELSSFTLVSVALACSNLGVMHGLRL 215
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G +HG + ++G F +NAL+AMY K V++ LFE +R++VSWN++I FS+
Sbjct: 216 GKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQ 274
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ E+ M+ EG D +T+ +VLP
Sbjct: 275 SDRFSEALAFFRLMV--LEGVELDGVTIASVLP 305
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 111/252 (44%), Gaps = 25/252 (9%)
Query: 82 KALSLLQENLHNADLKEATGVL---LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
KAL L E + A L T + + AC H + + +H + F D +
Sbjct: 382 KALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGY-AVKLGFKEDRYVQNA 440
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS------ 192
L+ MYS G S +FDS++ R+ WN +++G+ + Y++ L + E+
Sbjct: 441 LMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKD 500
Query: 193 ----------DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALI 242
KP+ T V+ C +A + G +H A + L D+ V +AL+
Sbjct: 501 VKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALV 560
Query: 243 AMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEG---- 298
MY KC + ++F MP +N+++WN +I +G E+ +L K M E G
Sbjct: 561 DMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELF-KNMVAEAGRGGE 619
Query: 299 FIPDVITVVTVL 310
P+ +T +TV
Sbjct: 620 AKPNEVTFITVF 631
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 74/130 (56%), Gaps = 5/130 (3%)
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+R+ W + T++ + + +S ++E++ + +PDNF FP V+KA G+ D+ G
Sbjct: 54 SRSTASWVDALRSRTRSNDFREAISTYIEMTV-SGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 221 GVHGMAAKMGL-IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII---CGF 276
+H A K G V V+N L+ MYGKC + ++ K+F+ + +R+ VSWNS I C F
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172
Query: 277 SENGFSCESF 286
+ + E+F
Sbjct: 173 EKWEQALEAF 182
>gi|326499065|dbj|BAK06023.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 572
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 116/228 (50%), Gaps = 9/228 (3%)
Query: 86 LLQENLHNADLKEATGVLLQA---CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITM 142
LL LH + +L A C ++ I G +L+ + + T LI +
Sbjct: 163 LLLVELHRRGISADISILAYAMSFCAVKQSIRGGA---QLLMVKIGYELSVLSGTSLIIL 219
Query: 143 YSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFT 202
Y+ CG ++ RVF + +N W L+SG+ ++ L +F +L + +P++ T
Sbjct: 220 YARCGQLGNACRVFQDMPIKNTVSWTTLISGYARDNQVEPCLRVF-QLMRQSVCRPNDIT 278
Query: 203 FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
FP + C A + G +HG+ +MG V VSNALI+MY KC + E +FE +
Sbjct: 279 FPTIFSVCTNHALLALGKSIHGLELRMGFDLCVHVSNALISMYVKCGNIIEAQSIFESIV 338
Query: 263 ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++LVSWNS+I G+S++G LL +M EE +PDVI+ + +L
Sbjct: 339 CKDLVSWNSMIFGYSQHGLVECCLSLLKEMD--EEQIVPDVISFLGIL 384
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 87/179 (48%), Gaps = 3/179 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ C + + +GK +H L F ++ LI+MY CG ++++ +F+S+ +
Sbjct: 282 IFSVCTNHALLALGKSIHGL-ELRMGFDLCVHVSNALISMYVKCGNIIEAQSIFESIVCK 340
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN+++ G++++ L LS+ E+ + ++ PD +F ++ +C V G
Sbjct: 341 DLVSWNSMIFGYSQHGLVECCLSLLKEMDEE-QIVPDVISFLGILSSCRHACLVEEGRCC 399
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE-RNLVSWNSIICGFSENG 280
K+G+ ++ + ++ + G+ F++E L M N V W S++ +G
Sbjct: 400 FNAMIKLGIEPELEHYSCMVDLLGRVGFLDEAWDLIHTMSTPPNAVIWGSLLAACRMHG 458
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1724
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 129/246 (52%), Gaps = 14/246 (5%)
Query: 69 EITTLCEESKSLNKALSLLQENLHNAD----LKEATGVLLQACGHEKDIEIGKRVHELVS 124
+I + C + L +AL LL N D LK +LQ C +K + G +H +
Sbjct: 4 KIQSACNLGR-LAEALKLLSSNPTRLDPSLYLK-----ILQLCIDKKAKKQGHLIHTHL- 56
Query: 125 ASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVL 184
+ F +D +NT+LI Y G + +R VFD + R++ W A+VSG+++N +
Sbjct: 57 ITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAF 116
Query: 185 SIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAM 244
+F ++ +K + FT+ ++AC + + G V G K + ++FV +AL+
Sbjct: 117 VLFSDMRH-CGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDF 175
Query: 245 YGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVI 304
+ KC +E+ LF M ER++VSWN++I G++ GF+ +SF + M+ G +PD
Sbjct: 176 HSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSML--RGGLVPDCY 233
Query: 305 TVVTVL 310
T+ +VL
Sbjct: 234 TLGSVL 239
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 105/197 (53%), Gaps = 9/197 (4%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK +H + F NT LI MYS G +R VFD ++ RN W+ ++SG+
Sbjct: 763 GKALHAFCIVGSVNLGIFQTNT-LINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYV 821
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC---GGIADVGFGSGVHGMAAKMGLI 232
+ LY + + +F ++ ++P+ F +I AC G +AD GF VHG K G++
Sbjct: 822 RVGLYEEAVGLFCQMWG-LGVEPNGFMVASLITACSRSGYMADEGFQ--VHGFVVKTGIL 878
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
GDV+V AL+ YG V KLFE MP+ N+VSW S++ G+S++G E ++ +M
Sbjct: 879 GDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRM 938
Query: 293 MGCEEGFIPDVITVVTV 309
+EG + T TV
Sbjct: 939 R--QEGVSGNQNTFATV 953
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 123/240 (51%), Gaps = 12/240 (5%)
Query: 75 EESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDI-EIGKRVHELVSASTQFSNDF 133
EE KA L++E A+ VL AC D+ + G +H + + S+D+
Sbjct: 1229 EEPNEAVKAYKLIREKGIPANYITMVSVL-GACSAPDDLLKHGMPIHAHIVLTGFESDDY 1287
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
+ N+ LITMY+ CG S +FD L ++ WNA+V+ + + L IF E+ +
Sbjct: 1288 VKNS-LITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMR-N 1345
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+ D F+F + A +A + G +HG+ K+G D+ V+NA + MYGKC + +
Sbjct: 1346 VGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHD 1405
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGF---SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++K+ R+ +SWN +I F+ +G + E+F ++K+ G PD +T V++L
Sbjct: 1406 VLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKL-----GPKPDHVTFVSLL 1460
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 109/211 (51%), Gaps = 5/211 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L+A + I ++H +++ S D I+ LI Y+ G ++ + +
Sbjct: 236 GSVLRASAEGGGLIIANQIHGIITQLGYGSYD-IVTGLLINAYAKNGSLRSAKDLRKGML 294
Query: 161 TRNLFQWNALVSGFTKNELYT-DVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
++LF AL++G+ +Y+ D L +F E++ + D+ ++ C +A G
Sbjct: 295 KKDLFSSTALITGYAHEGIYSVDALDLFKEMNQ-MNIGMDDVILCSMLNICANLASFALG 353
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+ +H A K DV + NALI MY K +E+ + F+ M E+N++SW S+I G++++
Sbjct: 354 TQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKH 413
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G+ + L KM +GF P+ +T +++L
Sbjct: 414 GYGHMAVSLYKKME--SKGFKPNDVTFLSLL 442
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 104/201 (51%), Gaps = 8/201 (3%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
+++ G+ +H LV SN I NT L+T+YS G D+ VF ++ R+L WN+++
Sbjct: 1063 NLKWGRGIHGLVVKLGLDSNVCICNT-LLTLYSEAGRSEDAELVFQAMTERDLISWNSMM 1121
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
+ + ++ D L I EL ++ ++ TF + AC + VH + G
Sbjct: 1122 ACYVQDGKCLDGLKILAELLQMGKVM-NHVTFASALAACSNPECLIESKIVHALIIVAGF 1180
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL--L 289
+ V NAL+ MYGK + E K+ + MP+ + V+WN++I G +EN E+ L
Sbjct: 1181 HDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKL 1240
Query: 290 IKMMGCEEGFIPDVITVVTVL 310
I+ E+G + IT+V+VL
Sbjct: 1241 IR----EKGIPANYITMVSVL 1257
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 93/185 (50%), Gaps = 3/185 (1%)
Query: 103 LLQACGHEKDI-EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
L+ AC + + G +VH V T D + T L+ Y G +++++F+ +
Sbjct: 851 LITACSRSGYMADEGFQVHGFV-VKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPD 909
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
N+ W +L+ G++ + +VL+++ + + N TF V +CG + D G
Sbjct: 910 HNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQN-TFATVTSSCGLLEDQVLGYQ 968
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
V G + G V V+N+LI+M+ + VEE +F+ M E +++SWN++I ++ +G
Sbjct: 969 VLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGL 1028
Query: 282 SCESF 286
ES
Sbjct: 1029 CRESL 1033
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 104/205 (50%), Gaps = 4/205 (1%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
+CG +D +G +V + F + + LI+M+S ++ VFD + ++
Sbjct: 956 SCGLLEDQVLGYQVLGHI-IQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDII 1014
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
WNA++S + + L + L F + ++ T ++ C + ++ +G G+HG+
Sbjct: 1015 SWNAMISAYAHHGLCRESLRCF-HWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGL 1073
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
K+GL +V + N L+ +Y + E+ +F+ M ER+L+SWNS++ + ++G +
Sbjct: 1074 VVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDG 1133
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
+L +++ + G + + +T + L
Sbjct: 1134 LKILAELL--QMGKVMNHVTFASAL 1156
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 92/193 (47%), Gaps = 3/193 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G L+AC + +++G +V + +F + + + L+ +S CG D+ +F ++
Sbjct: 135 GSALRACTSLRCLDMGIQVQGCIQKG-RFVENLFVKSALVDFHSKCGKMEDASYLFGTMM 193
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ WNA++ G+ D +F + L PD +T V++A + +
Sbjct: 194 ERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGG-LVPDCYTLGSVLRASAEGGGLIIAN 252
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG+ ++G V+ LI Y K + L + M +++L S ++I G++ G
Sbjct: 253 QIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEG 312
Query: 281 -FSCESFDLLIKM 292
+S ++ DL +M
Sbjct: 313 IYSVDALDLFKEM 325
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 6/164 (3%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E G+++H LV F +D + + MY CG D ++ R+ WN L+S
Sbjct: 1368 LEEGQQLHGLV-IKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILIS 1426
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMG 230
F ++ + F E+ KPD+ TF ++ AC GG+ D G M + G
Sbjct: 1427 AFARHGCFQKARETFHEMLK-LGPKPDHVTFVSLLSACNHGGLVDEGLAY-YDSMTREFG 1484
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
+ + +I + G+ + + MP N ++W S++
Sbjct: 1485 VFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLL 1528
>gi|225436291|ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 906
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 105/193 (54%), Gaps = 2/193 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
V+L+ACG + + G+ VH LV + + F+ N L++MY CG D+ VF +
Sbjct: 66 AVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENA-LVSMYGSCGALEDAAVVFGGID 124
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+L W++++SG+ KN L + L IF ++ S ++PD F F V+ AC + FG+
Sbjct: 125 KPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGG-IEPDAFAFSMVLGACTNLECWDFGT 183
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H KMG +++ N+L+ Y KC +E M ++F M E+NLVSWN+ I G+ N
Sbjct: 184 QAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYVHNF 243
Query: 281 FSCESFDLLIKMM 293
E+ + +M
Sbjct: 244 HYLEALRIFQILM 256
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 96/172 (55%), Gaps = 5/172 (2%)
Query: 142 MYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL---SSDTELKP 198
MY G ++R++FD + R+L W ++SG+ ++ ++VL +F ++ S L+P
Sbjct: 1 MYVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSGGGLLRP 60
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D+F F V++ACG + + +G GVHG+ K + D FV NAL++MYG C +E+ +F
Sbjct: 61 DSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAAVVF 120
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + +LV W+SI+ G+ +NG E + M+ G PD VL
Sbjct: 121 GGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMV--SGGIEPDAFAFSMVL 170
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 92/171 (53%), Gaps = 3/171 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C E +E GK H L+ S+ +++++ LI MYS CG ++RVF ++
Sbjct: 345 LLKWCSLESSLESGKMFHSLIIKLDLKSDSYVLSS-LIDMYSKCGIWEAAKRVFTRVEQP 403
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W+AL+SG + N + + L +F ++ D +K + FTF VI AC + ++ G +
Sbjct: 404 DTAPWSALISGHSWNGCFAEALKLFRKMQFDG-IKANEFTFTSVILACLALENLRKGKEL 462
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
H + G + V N LI +Y + ++ +KL ++P+ +SWN +I
Sbjct: 463 HCKILRSGYESNFSVVNTLINLYSELWQHKQALKLCSMIPDSE-ISWNFLI 512
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A ++L AC + + + G + H + F + + L+ Y+ CG RRVF
Sbjct: 165 AFSMVLGACTNLECWDFGTQAHCYI-IKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSH 223
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ +NL WN ++G+ N Y + L IF L + + D+F+ ++KA G+ +
Sbjct: 224 MSEKNLVSWNTFINGYVHNFHYLEALRIFQILMEEVS-QCDDFSLLSILKAVSGLGHLDH 282
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV 260
G +HG + G+ + +V ++L+ MY C E + EV
Sbjct: 283 GKEIHGYILRAGIETNRYVVSSLLDMYIGCIDHESLYPRVEV 324
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 89/205 (43%), Gaps = 28/205 (13%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYS----------LCGFP 149
T V+L AC +++ GK +H + S SN ++NT LI +YS LC
Sbjct: 444 TSVIL-ACLALENLRKGKELHCKILRSGYESNFSVVNT-LINLYSELWQHKQALKLCSMI 501
Query: 150 LDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS-SDTELKPDNFTFPC-VI 207
DS WN L+ E Y + + + S L P C +
Sbjct: 502 PDSE-----------ISWNFLIRACLGAEDYEIIHKLLWRIQVSHGNLDP---VSACDIF 547
Query: 208 KACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLV 267
+C + G+ H K GLI +SN+LI MY C +E V+ F +MPE++
Sbjct: 548 ASCSSPVLLNVGTQAHAYMTKRGLISHPTISNSLIQMYSACGKFDEAVQAFNLMPEKDTC 607
Query: 268 SWNSIICGFSENGFSCESFDLLIKM 292
SW SI+ E+G E+ +L+ +M
Sbjct: 608 SWTSILSARVEHGHPSEALNLISQM 632
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%)
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D F ++K C + + G H + K+ L D +V ++LI MY KC E ++F
Sbjct: 338 DEFIMTSLLKWCSLESSLESGKMFHSLIIKLDLKSDSYVLSSLIDMYSKCGIWEAAKRVF 397
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ + + W+++I G S NG E+ L KM
Sbjct: 398 TRVEQPDTAPWSALISGHSWNGCFAEALKLFRKM 431
>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
Length = 635
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 113/211 (53%), Gaps = 6/211 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL A ++ G+ +H ++ ++ F+ N LI MY+ C D+ VF+SL +R
Sbjct: 164 LLGAVAALSWLDRGRALHRRIACCGFLADIFVANC-LINMYAKCRSLADACSVFESLTSR 222
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W ALV+ + N + D L +F+ ++ D ++P TF V+ C IA G G V
Sbjct: 223 SVIAWTALVAAYALNGFFRDALKVFLLMTLDG-VEPTEVTFVTVVDVCADIAVFGIGREV 281
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ +V V NALI MYGKCA +E K+F+ M +++++WNS+I + +NG+
Sbjct: 282 HGVIDARSE-ANVCVGNALINMYGKCASPDEARKVFDAMQRKDIITWNSMIAVYGQNGYG 340
Query: 283 CESFDLLIKMMGCEE---GFIPDVITVVTVL 310
++ ++ +M G D IT + VL
Sbjct: 341 FQALEIYKRMQESRMTILGITHDDITFIGVL 371
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 123/243 (50%), Gaps = 7/243 (2%)
Query: 68 QEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSAST 127
Q+I L E L A+ LL E+ + E L+ CG E I GKR+H +
Sbjct: 31 QQIDRL--ERLDLRDAVQLL-EDRSVSPSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCG 87
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
S+ ++ N L+ MY CG ++ VF RN+F W +V+ F N Y D L++
Sbjct: 88 FKSSRYLCNL-LVEMYGKCGSLQAAKSVFHITPRRNVFSWTIMVAAFAHNGHYMDALNL- 145
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+E+ + P++ TF ++ A ++ + G +H A G + D+FV+N LI MY K
Sbjct: 146 LEIMDLEGISPNSITFIELLGAVAALSWLDRGRALHRRIACCGFLADIFVANCLINMYAK 205
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
C + + +FE + R++++W +++ ++ NGF ++ + + M +G P +T V
Sbjct: 206 CRSLADACSVFESLTSRSVIAWTALVAAYALNGFFRDALKVFLLMT--LDGVEPTEVTFV 263
Query: 308 TVL 310
TV+
Sbjct: 264 TVV 266
>gi|224059226|ref|XP_002299777.1| predicted protein [Populus trichocarpa]
gi|222847035|gb|EEE84582.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 103/212 (48%), Gaps = 38/212 (17%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ ++ T L+ MY+ CG SR FD LK +N F WN ++ GF +N + + +F E+
Sbjct: 47 NLMVGTALVDMYAKCGHVELSRLCFDELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEMP 106
Query: 192 SD------------------------------TELKPDNFTFPCVIKACGGIADVGFGSG 221
++++PD T V+ AC + +G G
Sbjct: 107 ERGVISWTVLINGFVKMGLFEEALEWFRKMQVSKVEPDRVTIVTVLSACANLGALGLGLW 166
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH A K GL +V + N+LI +Y +C +E ++FE M ER LVSWNSII G + NGF
Sbjct: 167 VHRYALKKGLRDNVKICNSLIDLYSRCGAIELARQVFEKMGERTLVSWNSIIGGLAANGF 226
Query: 282 S---CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E FDL+ K +GF P+ ++ L
Sbjct: 227 TEEALEHFDLMQK-----QGFKPNDVSFTGAL 253
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 195 ELKPDNFTFPCVIKACGGIADVG--FGSGVHGMAAKMGL-IGDVFVSNALIAMYGKCAFV 251
E+ P++ TF ++ C + G G +H K+GL ++ V AL+ MY KC V
Sbjct: 5 EIDPNHVTFITLLSGCADLPSQGNSLGPLLHAYTRKLGLDTCNLMVGTALVDMYAKCGHV 64
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
E F+ + +N SWN++I GF NG E+ ++ +M
Sbjct: 65 ELSRLCFDELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEM 105
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 114/203 (56%), Gaps = 7/203 (3%)
Query: 111 KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC-GFPLDSRRVFDSLKTRNLFQWNA 169
KD+ G + H ++ S F + + + LI +YS C G ++ R+VF+ + +L WN
Sbjct: 257 KDLVGGMQFHGMMIKSG-FHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNT 315
Query: 170 LVSGFTKNE-LYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK 228
++SGF++ E L D + F E+ + PD+ +F CV AC ++ G VH +A K
Sbjct: 316 MISGFSQYEDLSEDGIWCFREMQHNG-FHPDDCSFVCVTSACSNLSSPSVGKQVHALAIK 374
Query: 229 MGL-IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFD 287
+ V V+NAL+AMY KC V + ++F+ MPE N+VS NS+I G++++G ES
Sbjct: 375 SDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLR 434
Query: 288 LLIKMMGCEEGFIPDVITVVTVL 310
L M+ ++ P+ IT + VL
Sbjct: 435 LFELML--QKDIAPNTITFIAVL 455
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 104/214 (48%), Gaps = 10/214 (4%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
+GV++ ACG D+ + +++H V + +N ++ YS GF ++RRVF +
Sbjct: 145 SGVII-ACG--DDVGLVRQLHCFVVVCG-YDCYASVNNAVLACYSRKGFLNEARRVFREM 200
Query: 160 KT---RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
R+ WNA++ ++ + + +F E+ LK D FT V+ A + D+
Sbjct: 201 GEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRG-LKVDMFTMASVLTAFTCVKDL 259
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA-FVEEMVKLFEVMPERNLVSWNSIICG 275
G HGM K G G+ V + LI +Y KCA + E K+FE + +LV WN++I G
Sbjct: 260 VGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISG 319
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
FS+ E + M GF PD + V V
Sbjct: 320 FSQYEDLSEDGIWCFREMQ-HNGFHPDDCSFVCV 352
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC + +GK+VH L S N +N L+ MYS CG D+RRVFD++ N+
Sbjct: 355 ACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMV 414
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG- 224
N++++G+ ++ + + L +F EL ++ P+ TF V+ AC V G
Sbjct: 415 SLNSMIAGYAQHGVEVESLRLF-ELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNM 473
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENG 280
M + + + + +I + G+ ++E ++ E MP + W +++ ++G
Sbjct: 474 MKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHG 530
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 104/242 (42%), Gaps = 40/242 (16%)
Query: 103 LLQACGHEKDIEIGKRVHELVSAS-------------------------------TQFSN 131
LL+AC ++D+ GK +H L S TQ+ N
Sbjct: 15 LLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLTQYPN 74
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
F NT LI Y+ +R+VFD + ++ +N L++ + L +F E+
Sbjct: 75 VFSYNT-LINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEV- 132
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ D FT VI ACG DVG +H G V+NA++A Y + F+
Sbjct: 133 RELRFGLDGFTLSGVIIACGD--DVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFL 190
Query: 252 EEMVKLFEVMPE---RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
E ++F M E R+ VSWN++I ++ E+ +L +M+ G D+ T+ +
Sbjct: 191 NEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMV--RRGLKVDMFTMAS 248
Query: 309 VL 310
VL
Sbjct: 249 VL 250
>gi|255584555|ref|XP_002533004.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527215|gb|EEF29379.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 98/174 (56%), Gaps = 3/174 (1%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
T LI Y G D+ ++F + RN+ WNA+V GF++ + +S+F+E+ +
Sbjct: 169 TTLIHGYLKKGKIDDALQLFQEMPERNVVSWNAMVGGFSQMGHNEEAVSLFIEMLREG-F 227
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
P+ TFPC I + +A +G G H A K DVFV N+L++ Y KC +E+ +
Sbjct: 228 MPNQSTFPCAITSAANMASLGMGKSFHACAVKSLCTSDVFVCNSLVSFYAKCGSMEDSLL 287
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F +P+RN VSWN++ICGF++NG ++ +M G P+ +T++ +L
Sbjct: 288 VFNELPDRNTVSWNAVICGFAQNGRGEDAVIFFERMRAA--GLRPNSVTLLGLL 339
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
+ +++H L S + + + S +D +FD + ++ L+ F
Sbjct: 15 VRRKIHSLASGHAHKAECSPVPVDIKVCRSKSNIRMDVDELFDEMPELDVLSVTTLIGRF 74
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
+ Y + + +F + +KP+ FTF VI + G+ ++ G +H KMGL
Sbjct: 75 ARQHRYEEAMCLFSRMLL-LNIKPNEFTFATVIHSSTGLKNIYLGKQLHARTMKMGLNTI 133
Query: 235 VFVSNALIAMYGK-CAF------------------------------VEEMVKLFEVMPE 263
VFV +A++ Y K C+F +++ ++LF+ MPE
Sbjct: 134 VFVGSAMLDFYAKLCSFEEARNAFEDIQKPNVVSYTTLIHGYLKKGKIDDALQLFQEMPE 193
Query: 264 RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
RN+VSWN+++ GFS+ G + E+ L I+M+ EGF+P+ T
Sbjct: 194 RNVVSWNAMVGGFSQMGHNEEAVSLFIEML--REGFMPNQST 233
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
+GK H S S+ F+ N+ L++ Y+ CG DS VF+ L RN WNA++ GF
Sbjct: 249 MGKSFHACAVKSLCTSDVFVCNS-LVSFYAKCGSMEDSLLVFNELPDRNTVSWNAVICGF 307
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGF 218
+N D + IF E L+P++ T ++ AC G+ + G+
Sbjct: 308 AQNGRGEDAV-IFFERMRAAGLRPNSVTLLGLLCACNHAGLVEKGY 352
>gi|222618959|gb|EEE55091.1| hypothetical protein OsJ_02835 [Oryza sativa Japonica Group]
Length = 575
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 101/184 (54%), Gaps = 3/184 (1%)
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
T F+ D + + ++ MY+ CG D+RR+FD + RN+ W+AL+ G+ +++ + I
Sbjct: 132 TPFAGDVFVGSSVLDMYAKCGHLADARRLFDEMPKRNVVSWSALICGYADAGMHSAAMEI 191
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
F L+ + + ++FT C+++ C G+ VH + K L FV ++L+++Y
Sbjct: 192 F-RLALEEAVPVNDFTVSCILRVCAAATLFELGAQVHARSIKTALNASPFVGSSLVSLYS 250
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
KC VE ++F PERNL WN+ + +++G + +F + M GF P+ IT
Sbjct: 251 KCGLVECAYQVFGEAPERNLGIWNAGLNASAQHGHTTAAFQRFMDMQ--NAGFRPNSITF 308
Query: 307 VTVL 310
++++
Sbjct: 309 LSLI 312
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 3/172 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C E+G +VH S T + + + L+++YS CG + +VF R
Sbjct: 210 ILRVCAAATLFELGAQVHAR-SIKTALNASPFVGSSLVSLYSKCGLVECAYQVFGEAPER 268
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL WNA ++ ++ T F+++ + +P++ TF +I AC V G
Sbjct: 269 NLGIWNAGLNASAQHGHTTAAFQRFMDM-QNAGFRPNSITFLSLITACSHAGLVDEGKRY 327
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
+ + + A++ + G+ + E + L E MP E W +++
Sbjct: 328 FSLMKEYRIEPQAEHYAAMVDLLGRVGRISEALGLIESMPMEPPEYVWGALL 379
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIA-----MYGKCAFVEEMVKLFEVMPER-NLVSWNSI 272
G +HG K G + S+A IA Y +CA + + F +P + +W+S+
Sbjct: 34 GQQLHGHLLKAGHLPATASSHAPIAHHLLTFYARCALPGDSLCAFLDLPAPPSPAAWSSL 93
Query: 273 ICGFSENGFSCESFDLLIKMMG 294
I FS+NG +FD +M+
Sbjct: 94 ISSFSQNGLPAAAFDAFRRMLA 115
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 103/197 (52%), Gaps = 4/197 (2%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
+G++ H LV + F D ++T L+ MY G D +VF + RN + W+ +VSG+
Sbjct: 136 VGRQAHALVVKMSSF-GDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGY 194
Query: 175 TKNELYTDVLSIF-VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
+ + +F + L E ++ F V+ + VG G +H + K GL+G
Sbjct: 195 ATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLG 254
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
V +SNAL+ MY KC + E K+F+ +RN ++W++++ G+S+NG S E+ L +M
Sbjct: 255 FVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMF 314
Query: 294 GCEEGFIPDVITVVTVL 310
G P T+V VL
Sbjct: 315 SA--GIKPSEYTIVGVL 329
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 111/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E GK++H + F T L+ MY+ G D+R+ FD L+ R
Sbjct: 328 VLNACSDICYLEEGKQLHSFL-LKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQER 386
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +L+SG+ +N + L ++ + + + P++ T V+KAC +A + G V
Sbjct: 387 DVALWTSLISGYVQNSDNEEALILYRRMKT-AGIIPNDPTMASVLKACSSLATLELGKQV 445
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K G +V + +AL MY KC +E+ +F P +++VSWN++I G S NG
Sbjct: 446 HGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQG 505
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L +M+ EG PD +T V ++
Sbjct: 506 DEALELFEEMLA--EGMEPDDVTFVNII 531
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 116/223 (52%), Gaps = 21/223 (9%)
Query: 95 DLKEATGVLLQACGH---EKDIEIGKRVHELV---SASTQFSNDFIINTRLITMYSLCGF 148
+L T LL+ H ++++ G+ VH + AST + + L+ Y+ CG
Sbjct: 9 ELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANV----LVNFYAKCGK 64
Query: 149 PLDSRRVFDSLKTRNLFQWNALVSGFTKN----ELYTDVLSIFVELSSDTELKPDNFTFP 204
+ +F+++ +++ WN+L++G+++N YT V+ +F E+ + ++ P+ +T
Sbjct: 65 LAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYT-VMQLFREMRAQ-DILPNAYTLA 122
Query: 205 CVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
+ KA + G H + KM GD++V +L+ MY K VE+ +K+F MPER
Sbjct: 123 GIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER 182
Query: 265 NLVSWNSIICGFSENGFSCES---FDLLIKMMGCEEGFIPDVI 304
N +W++++ G++ G E+ F+L ++ EEG D +
Sbjct: 183 NTYTWSTMVSGYATRGRVEEAIKVFNLFLREK--EEGSDSDYV 223
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 103/198 (52%), Gaps = 4/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+ +G+++H ++ ++ L+TMYS C ++ ++FDS RN W+A+V+
Sbjct: 237 VGLGRQIH-CITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVT 295
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G+++N + + +F + S +KP +T V+ AC I + G +H K+G
Sbjct: 296 GYSQNGESLEAVKLFSRMFS-AGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE 354
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+F + AL+ MY K + + K F+ + ER++ W S+I G+ +N + E+ L +M
Sbjct: 355 RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 414
Query: 293 MGCEEGFIPDVITVVTVL 310
G IP+ T+ +VL
Sbjct: 415 K--TAGIIPNDPTMASVL 430
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC +E+GK+VH + F + I + L TMYS CG D VF +
Sbjct: 429 VLKACSSLATLELGKQVHGH-TIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNK 487
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
++ WNA++SG + N + L +F E+ ++ ++PD+ TF +I AC
Sbjct: 488 DVVSWNAMISGLSHNGQGDEALELFEEMLAEG-MEPDDVTFVNIISAC 534
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
TEL P T + ++ G VHG + G + +N L+ Y KC + +
Sbjct: 8 TELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAK 67
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL--LIKMMGCEEGFIPDVITVVTVL 310
+F + +++VSWNS+I G+S+NG S+ + L + M ++ +P+ T+ +
Sbjct: 68 AHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQD-ILPNAYTLAGIF 125
>gi|357153087|ref|XP_003576334.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Brachypodium distachyon]
Length = 531
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 93/171 (54%), Gaps = 6/171 (3%)
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
IT ++ G + RVF + R+ WN+L+ G+TK Y L +F E+ D+ ++P
Sbjct: 229 ITRHARVGDMEAAARVFREMPGRDAVSWNSLIGGYTKLGRYVQALEVFREMQ-DSGVEPT 287
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
T V+ AC I ++ G GVHG G++ D +V NAL+ MY KC +E +LFE
Sbjct: 288 ELTLVSVLGACAEIGELELGKGVHGYIGSKGVVADGYVGNALVDMYAKCGSLELARQLFE 347
Query: 260 VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
M R++ WN++I GFS +G+S ++ +L M PD +T + VL
Sbjct: 348 SMSTRDITCWNAMIVGFSVHGYSRKALELFDAMR-----VEPDHVTFLGVL 393
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 21/216 (9%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC ++E+GK VH + + ++ ++ N L+ MY+ CG +R++F+S+ TR
Sbjct: 294 VLGACAEIGELELGKGVHGYIGSKGVVADGYVGNA-LVDMYAKCGSLELARQLFESMSTR 352
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVG--- 217
++ WNA++ GF+ + L +F + ++PD+ TF V+ AC GG+ D G
Sbjct: 353 DITCWNAMIVGFSVHGYSRKALELFDAM----RVEPDHVTFLGVLIACSHGGLVDEGRVY 408
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGF 276
F S M ++ V ++ M +C V E ++ MP + N V W ++
Sbjct: 409 FRS----MTEDYKIVPGVKHYGCMVDMLCRCGKVAEAYQMINHMPVKANCVLWKMVLAAC 464
Query: 277 SENG---FSCESFDLLIKMMGCEEGFIPDVITVVTV 309
+G + ++F L ++M ++G DVITV V
Sbjct: 465 RVHGHIDLANKAFHELHQLMPIDDG---DVITVSNV 497
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 12/91 (13%)
Query: 202 TFPCVIKAC------------GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
FP ++K+C GG V G +HG K+G GD +V NAL++MYGK
Sbjct: 115 AFPALLKSCARAFGLCAAADGGGEGFVSKGMELHGRVLKLGCGGDRYVQNALVSMYGKLG 174
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+ + K+F+ MP RN VSWN+++ G
Sbjct: 175 RLGDARKVFDGMPARNAVSWNALVAAHGATG 205
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 51/202 (25%)
Query: 111 KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNAL 170
K +E+ RV +L D + L++MY G D+R+VFD + RN WNAL
Sbjct: 143 KGMELHGRVLKL-----GCGGDRYVQNALVSMYGKLGRLGDARKVFDGMPARNAVSWNAL 197
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
V+ A G D+ HG+
Sbjct: 198 VA------------------------------------AHGATGDL------HGVELLSR 215
Query: 231 LIGDVFVS--NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
+ + VS NA I + + +E ++F MP R+ VSWNS+I G+++ G ++ ++
Sbjct: 216 EMPERSVSWWNAEITRHARVGDMEAAARVFREMPGRDAVSWNSLIGGYTKLGRYVQALEV 275
Query: 289 LIKMMGCEEGFIPDVITVVTVL 310
+M + G P +T+V+VL
Sbjct: 276 FREMQ--DSGVEPTELTLVSVL 295
>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 110/214 (51%), Gaps = 4/214 (1%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
++ G L+ A + + +GK VH + D I T LI MY CG + R+F
Sbjct: 247 QQTFGSLVSAAAMQSKLGVGKMVHGHI-LRAGLEQDSHIETSLIGMYLKCGNVNSAFRIF 305
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
+ + +++ W A++SG +N+ +++F + + + P T V+ AC +
Sbjct: 306 EGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLK-SRVMPSTATIASVLAACAELGSF 364
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G+ VHG + + D+ N+L+ MY KC +E+ +F+ M R++VSWN+I+ G
Sbjct: 365 PLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGH 424
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++NG C++ L +M + PD ITVV++L
Sbjct: 425 AQNGHLCKALLLFNEMRKARQR--PDSITVVSLL 456
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 89/178 (50%), Gaps = 2/178 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +G VH + + D L+TMY+ CG S VFD + R
Sbjct: 354 VLAACAELGSFPLGTSVHGYI-LRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRR 412
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA+VSG +N L +F E+ + +PD+ T +++AC I + G +
Sbjct: 413 DIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQ-RPDSITVVSLLQACASIGALHQGKWI 471
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H K L + + AL+ MY KC + K F+ MP+++LVSW+SII G+ +G
Sbjct: 472 HNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHG 529
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 97/182 (53%), Gaps = 3/182 (1%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F +D + ++ +Y CG D++ +F+ + R++ WN+LVSG+ + +VL + +
Sbjct: 177 FGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLI 236
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
+ +D ++PD TF ++ A + +G G VHG + GL D + +LI MY KC
Sbjct: 237 RMKTDG-IEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKC 295
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
V ++FE M ++++SW ++I G +N + + + +M+ + +P T+ +
Sbjct: 296 GNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRML--KSRVMPSTATIAS 353
Query: 309 VL 310
VL
Sbjct: 354 VL 355
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L++AC G H+ V +S+D I T LI YS G +R+VFD++ R
Sbjct: 54 LVKACTSLDLFSHGLSFHQRVIVDG-YSSDSYIATSLINFYSKFGHNQSARKVFDTMDDR 112
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W ++ +T+ + S++ + ++P + T ++ G+ ++ +
Sbjct: 113 NVVPWTTMIGCYTRAGEHDVAFSMY-NIMRRQGIQPSSVT---MLGLLSGVLELVHLQCL 168
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G DV ++N+++ +Y KC VE+ LFE+M R+++SWNS++ G+++ G
Sbjct: 169 HACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNI 228
Query: 283 CESFDLLIKMMGCEEGFIPD 302
E LLI+M +G PD
Sbjct: 229 REVLQLLIRMK--TDGIEPD 246
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
+NA+++ + + DVL + + S T+ PD TFP ++KAC + G H
Sbjct: 16 YNAIINRLSTAGAFCDVLLTYSSMLS-TDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
G D +++ +LI Y K + K+F+ M +RN+V W ++I ++ G +F
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134
Query: 287 DLLIKMMGCEEGFIPDVITVVTVL 310
+ M +G P +T++ +L
Sbjct: 135 SMYNIMR--RQGIQPSSVTMLGLL 156
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 103/197 (52%), Gaps = 4/197 (2%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
E+GK +H + F ++ ++T L+ MY C D+R+VFD + RN+ WNAL++G
Sbjct: 159 ELGKAIHCCI-IQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITG 217
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
+ N ++ V+ +F E+ KP T V+ AC + + G + L
Sbjct: 218 YNHNRMFRKVIDVFREMQI-AGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRL 276
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
+VFV ALI MY KC V+E K+F+ M +N+ +WN +I G++ NG + +M+
Sbjct: 277 NVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMI 336
Query: 294 GCEEGFIPDVITVVTVL 310
E F PD +T + VL
Sbjct: 337 --MEKFKPDEVTFLGVL 351
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 26/252 (10%)
Query: 78 KSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
KS +A S L + HN ++ ++ L C + I K H S S + ++ +
Sbjct: 6 KSFLQARSNLSQWTHNLTIRPSSTSALTLCENPPQITESKHSHLTKSISNHAHMNQML-S 64
Query: 138 RLITMYSLCGFPLDS---RRVFDSLKTRNLFQWNALV----SGFTKNEL-------YTD- 182
++I Y P+D ++ D + + F +AL+ GF ++L YTD
Sbjct: 65 QMIMNY----IPIDHLNLMKLIDFSVSSHGFAASALLFTQFYGFIDSDLCNSMIRCYTDS 120
Query: 183 ---VLSIFVELSS-DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVS 238
+ S+F+ + PD+ TFP V+K+ + G +H +MG +V+VS
Sbjct: 121 NKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVS 180
Query: 239 NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEG 298
AL+ MYG C+ V + ++F+ +P+RN+VSWN++I G++ N + D+ +M G
Sbjct: 181 TALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIA--G 238
Query: 299 FIPDVITVVTVL 310
P +T+V VL
Sbjct: 239 AKPVEVTMVGVL 250
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 107/198 (54%), Gaps = 6/198 (3%)
Query: 114 EIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
++G+ +H E+V Q S I + L+TMYS G + +F ++K R++ W +++S
Sbjct: 359 DLGRLIHTEIVKRPLQSS--ITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVIS 416
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
GF +N Y + L F + +D +KPD+ +I AC G+ V G +HG K GL
Sbjct: 417 GFCQNRKYKEALDFFRAMEADL-VKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQ 475
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
DVFV+++L+ MY K F E +F MP +NLV+WNSII + N S +L ++
Sbjct: 476 LDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQV 535
Query: 293 MGCEEGFIPDVITVVTVL 310
+ PD ++ +VL
Sbjct: 536 L--RNDLYPDSVSFTSVL 551
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 112/208 (53%), Gaps = 9/208 (4%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR- 162
+Q+ G+++ GK++H + + D + T LI Y CG P ++R +F LK R
Sbjct: 150 MQSSGYKE----GKQIHSYI-VRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRS 204
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN ++ GF +N L+ + L ++ L+ +K + +F C + ACG V FG V
Sbjct: 205 NIVAWNVMIGGFGENGLWENSLEYYL-LAKTENVKVVSSSFTCTLSACGQGEFVSFGKQV 263
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K+G D +V +L+ MYGKC +E K+F +P++ + WN++I + NG++
Sbjct: 264 HCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYA 323
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ + +M C + D T++ VL
Sbjct: 324 YDALRIYKQMKLCT--VLSDSFTILNVL 349
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 114/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC + +++G +H V S D + + L+ MYS GFP + +F + +
Sbjct: 449 IISACTGLEKVDLGCTIHGFVIKSG-LQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLK 507
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL WN+++S + +N L +++F ++ + +L PD+ +F V+ A +A + G V
Sbjct: 508 NLVAWNSIISCYCRNNLPDLSINLFSQVLRN-DLYPDSVSFTSVLAAISSVAALLKGKSV 566
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG ++ + D+ V N LI MY KC ++ +FE + E+NLV+WNS+I G+ +G
Sbjct: 567 HGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGEC 626
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L +M G PD +T +++L
Sbjct: 627 SKAIELFDEMR--SSGIKPDDVTFLSLL 652
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 2/189 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L ACG + + GK+VH + F +D ++T L+TMY C + +VF+ + +
Sbjct: 248 LSACGQGEFVSFGKQVH-CDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKE 306
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WNAL+S + N D L I+ ++ T L D+FT V+ + G +H
Sbjct: 307 IELWNALISAYVGNGYAYDALRIYKQMKLCTVLS-DSFTILNVLTSSSMAGLYDLGRLIH 365
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
K L + + +AL+ MY K +F M ER++V+W S+I GF +N
Sbjct: 366 TEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYK 425
Query: 284 ESFDLLIKM 292
E+ D M
Sbjct: 426 EALDFFRAM 434
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 32/187 (17%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL--- 159
LL+AC +++ GK +H + +T +D I + LI +Y CG D+ +VFD L
Sbjct: 59 LLKACASLSNLQYGKTIHSSI-ITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQLPKS 117
Query: 160 --KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
++ WN+++ G+ + F +L + G + G
Sbjct: 118 GVSVDDVTIWNSIIDGYFR----------FGQLEEG-------------MVQFGRMQSSG 154
Query: 218 FGSG--VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIIC 274
+ G +H + L D F+ ALI Y KC E LF+ + +R N+V+WN +I
Sbjct: 155 YKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIG 214
Query: 275 GFSENGF 281
GF ENG
Sbjct: 215 GFGENGL 221
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
++L + + + FT+P ++KAC ++++ +G +H GL D +++++LI +Y K
Sbjct: 41 LKLYTKSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVK 100
Query: 248 CAFVEEMVKLFEVMPER-----NLVSWNSIICGFSENG 280
C + VK+F+ +P+ ++ WNSII G+ G
Sbjct: 101 CGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFG 138
>gi|224084768|ref|XP_002307403.1| predicted protein [Populus trichocarpa]
gi|222856852|gb|EEE94399.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 123/245 (50%), Gaps = 8/245 (3%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADLKE---ATGVLLQACGHEKDIEIGKRVHELVSAS 126
+ T C + +A + + L+ L A+G+L +ACG EK ++ GK++H +
Sbjct: 112 MITACSQQGRCGEAFGMFTQMLNGGFLPNGFTASGIL-KACGEEKALKFGKQIHGAI-VK 169
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
+ +D + T L+ MY+ CG DS +VF+ ++ RN W ++++G+ + L + + +
Sbjct: 170 KMYKDDVFVGTSLVDMYAKCGEVSDSSKVFNGMRRRNTVTWTSIIAGYARKGLGEEAICL 229
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
F L + +N T +++ACG I + G VH K + ++ + L+ Y
Sbjct: 230 F-RLMMRRRVVSNNLTIVSMLRACGLIGALLAGREVHAQIIKNCSQSNEYLGSTLVWFYC 288
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
KC K+ + MP R++VSW +II G + G E+ + L +MM EEG P+ T
Sbjct: 289 KCGESRTASKVLQQMPFRDVVSWTAIISGHACLGHESEALEFLKEMM--EEGVEPNSFTY 346
Query: 307 VTVLP 311
+ L
Sbjct: 347 SSALK 351
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 110/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG + G+ VH + + SN+++ +T L+ Y CG + +V + R
Sbjct: 248 MLRACGLIGALLAGREVHAQIIKNCSQSNEYLGST-LVWFYCKCGESRTASKVLQQMPFR 306
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W A++SG ++ L E+ + ++P++FT+ +KAC + V G +
Sbjct: 307 DVVSWTAIISGHACLGHESEALEFLKEMMEEG-VEPNSFTYSSALKACANLETVLQGKLI 365
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K +VFV +ALI MY +C +V E +++F+ MPERNLV+W ++I G+ NG
Sbjct: 366 HSSANKTPASSNVFVGSALIHMYARCGYVSEAIQVFDSMPERNLVTWRAMIMGYVRNGLC 425
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L+ +M EG D VL
Sbjct: 426 QEALKLMYRMQA--EGIQVDDYISAKVL 451
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C D E+G++VH V + I+++ ++ Y CG + VFD + R
Sbjct: 47 VLNLCSRRLDFELGRQVHARVVKGNW--RNLIVDSAVVYFYVQCGDLKSAFCVFDRMVER 104
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +++ ++ + +F ++ + L P+ FT ++KACG + FG +
Sbjct: 105 DVVSWTTMITACSQQGRCGEAFGMFTQMLNGGFL-PNGFTASGILKACGEEKALKFGKQI 163
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K DVFV +L+ MY KC V + K+F M RN V+W SII G++ G
Sbjct: 164 HGAIVKKMYKDDVFVGTSLVDMYAKCGEVSDSSKVFNGMRRRNTVTWTSIIAGYARKGLG 223
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L MM + + +T+V++L
Sbjct: 224 EEAICLFRLMM--RRRVVSNNLTIVSML 249
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 4/150 (2%)
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
RN+ W A+++G+ K L + LS F + D + P++ TF CV+ C D G
Sbjct: 4 RNVVSWTAMINGYFKFGLDDEALSYFSQAIKDG-VVPNSKTFVCVLNLCSRRLDFELGRQ 62
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH K G ++ V +A++ Y +C ++ +F+ M ER++VSW ++I S+ G
Sbjct: 63 VHARVVK-GNWRNLIVDSAVVYFYVQCGDLKSAFCVFDRMVERDVVSWTTMITACSQQGR 121
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+F + +M+ GF+P+ T +L
Sbjct: 122 CGEAFGMFTQML--NGGFLPNGFTASGILK 149
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 79/149 (53%), Gaps = 5/149 (3%)
Query: 73 LCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSND 132
L ES++L +++E + ++ L+AC + + + GK +H + + SN
Sbjct: 321 LGHESEALEFLKEMMEEGVEPNSFTYSSA--LKACANLETVLQGKLIHSSANKTPASSNV 378
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
F+ + LI MY+ CG+ ++ +VFDS+ RNL W A++ G+ +N L + L + + +
Sbjct: 379 FV-GSALIHMYARCGYVSEAIQVFDSMPERNLVTWRAMIMGYVRNGLCQEALKLMYRMQA 437
Query: 193 DTELKPDNFTFPCVIKACGGIA-DVGFGS 220
+ ++ D++ V+ ACG I D G S
Sbjct: 438 EG-IQVDDYISAKVLGACGEIEWDAGHSS 465
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 121/241 (50%), Gaps = 38/241 (15%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRR-------- 154
+L AC + + + IG+++H + +T F I+ LI+MYS CG +RR
Sbjct: 285 VLSACANLEKLCIGEQIHSHI-VTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTK 343
Query: 155 -------------------------VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE 189
+FDSLK R++ W A++ G+ ++ LY + +++F
Sbjct: 344 DLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRS 403
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
+ + E +P+++T ++ +A +G G +HG A K G I V VSNALI MY K
Sbjct: 404 MVGE-EQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAG 462
Query: 250 FVEEMVKLFEVMP-ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
+ + F+++ ER+ VSW S+I +++G + E+ +L M+ EG PD IT V
Sbjct: 463 SITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML--MEGLRPDHITYVG 520
Query: 309 V 309
V
Sbjct: 521 V 521
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 107/262 (40%), Gaps = 67/262 (25%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD--------------- 157
+E GK+VH + + ++ L+ MY+ CG P+ ++ VFD
Sbjct: 162 LETGKKVHSFI-VKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIA 220
Query: 158 ----------------SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF 201
+ R++ WN+++SG+ + L +F ++ D+ L PD F
Sbjct: 221 LHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRF 280
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE--------- 252
T V+ AC + + G +H G V NALI+MY +C VE
Sbjct: 281 TLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQR 340
Query: 253 ------------------------EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
E +F+ + +R++V+W ++I G+ ++G E+ +L
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINL 400
Query: 289 LIKMMGCEEGFIPDVITVVTVL 310
M+G E+ P+ T+ +L
Sbjct: 401 FRSMVGEEQR--PNSYTLAAML 420
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 101/240 (42%), Gaps = 65/240 (27%)
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNE-------------- 178
+++N L+ +YS G+ L +R++FD + R F WN ++S + K
Sbjct: 50 YLMNN-LMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQ 108
Query: 179 -----------------LYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
Y + I E+ + ++P FT V+ + + G
Sbjct: 109 RDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREG-IEPSQFTLTNVLASVAATRCLETGKK 167
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCA--------FVEEMVK----------------- 256
VH K+GL G+V VSN+L+ MY KC F +VK
Sbjct: 168 VHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQ 227
Query: 257 ------LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
FE M ER++V+WNS+I G+++ G+ + D+ KM+ + PD T+ +VL
Sbjct: 228 MDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLR-DSMLSPDRFTLASVL 286
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-TR 162
L + GH GK++H S + + + N LITMY+ G + R FD ++ R
Sbjct: 426 LASLGH------GKQIHGSAVKSGEIYSVSVSNA-LITMYAKAGSITSASRAFDLIRCER 478
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W +++ ++ + L +F + + L+PD+ T+ V AC V G
Sbjct: 479 DTVSWTSMIIALAQHGHAEEALELFETMLMEG-LRPDHITYVGVFSACTHAGLVNQGRQY 537
Query: 223 HGMAAKMGLIGDVFVSNA-LIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
M + I A ++ ++G+ ++E + E MP E ++V+W S++
Sbjct: 538 FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLL 590
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG- 280
VH K GL+ V++ N L+ +Y K + KLF+ MP R SWN+++ +++ G
Sbjct: 36 VHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGD 95
Query: 281 --FSCESFDLL 289
SCE FD L
Sbjct: 96 MDSSCEFFDRL 106
>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g47840
gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 706
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 101/191 (52%), Gaps = 2/191 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V+L+ACG +I G+ +H ++ S+ ++ + L+ MY G S RVF +
Sbjct: 113 VVLKACGQSSNIAYGESLHAYAVKTSLLSSVYV-GSSLLDMYKRVGKIDKSCRVFSEMPF 171
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
RN W A+++G Y + L+ F E+S EL D +TF +KAC G+ V +G
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEEL-SDTYTFAIALKACAGLRQVKYGKA 230
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H G + + V+N+L MY +C +++ + LFE M ER++VSW S+I + G
Sbjct: 231 IHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQ 290
Query: 282 SCESFDLLIKM 292
++ + IKM
Sbjct: 291 EVKAVETFIKM 301
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 95/186 (51%), Gaps = 2/186 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+ L+AC + ++ GK +H V F + L TMY+ CG D +F+++
Sbjct: 213 AIALKACAGLRQVKYGKAIHTHVIVRG-FVTTLCVANSLATMYTECGEMQDGLCLFENMS 271
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ W +L+ + + + F+++ ++++ P+ TF + AC ++ + +G
Sbjct: 272 ERDVVSWTSLIVAYKRIGQEVKAVETFIKMR-NSQVPPNEQTFASMFSACASLSRLVWGE 330
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H +GL + VSN+++ MY C + LF+ M R+++SW++II G+ + G
Sbjct: 331 QLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAG 390
Query: 281 FSCESF 286
F E F
Sbjct: 391 FGEEGF 396
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ AC + G+++H V S ++ ++ ++ MYS CG + + +F ++ R
Sbjct: 316 MFSACASLSRLVWGEQLHCNV-LSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCR 374
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+ ++ G+ + + F + + KP +F ++ G +A + G V
Sbjct: 375 DIISWSTIIGGYCQAGFGEEGFKYFSWMR-QSGTKPTDFALASLLSVSGNMAVIEGGRQV 433
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A GL + V ++LI MY KC ++E +F ++VS ++I G++E+G S
Sbjct: 434 HALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKS 493
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL K + + GF PD +T ++VL
Sbjct: 494 KEAIDLFEKSL--KVGFRPDSVTFISVL 519
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 4/190 (2%)
Query: 122 LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYT 181
+V S Q F N+ L ++ + G +R+VFD + ++ W +++ +
Sbjct: 30 IVRISNQVMVKFDPNSHLRSLIN-AGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSD 88
Query: 182 DVLSIFVELSS-DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNA 240
+ L +F + D + PD V+KACG +++ +G +H A K L+ V+V ++
Sbjct: 89 EALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSS 148
Query: 241 LIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI 300
L+ MY + +++ ++F MP RN V+W +II G G E +M EE +
Sbjct: 149 LLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEE--L 206
Query: 301 PDVITVVTVL 310
D T L
Sbjct: 207 SDTYTFAIAL 216
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A LL G+ IE G++VH L + + + + LI MYS CG ++ +F
Sbjct: 413 ALASLLSVSGNMAVIEGGRQVHAL-ALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGE 471
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADV 216
++ A+++G+ ++ + + +F E S +PD+ TF V+ AC G D+
Sbjct: 472 TDRDDIVSLTAMINGYAEHGKSKEAIDLF-EKSLKVGFRPDSVTFISVLTACTHSGQLDL 530
Query: 217 GF 218
GF
Sbjct: 531 GF 532
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 140/291 (48%), Gaps = 24/291 (8%)
Query: 39 SLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNK---------------- 82
S+ SI+ + L+L AKTN+ S L I ++ S N
Sbjct: 42 SISSIYVTNTFLNLYAKTNHLS-HALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSF 100
Query: 83 ALSLLQENLHNADLKEATGVL---LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
A+SL + + ++ L A + D+ GK+ H V+ T S D + + L
Sbjct: 101 AISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHS-VAVKTGCSGDVYVGSSL 159
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
+ MY GF D+R++FD + RN W ++SG+ +++ + +F + + E++ +
Sbjct: 160 LNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQ-N 218
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
F V+ A V G VH +A K GL+ V V+NAL+ MY KC +++ V+ FE
Sbjct: 219 EFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFE 278
Query: 260 VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++N ++W++++ G+++ G S ++ L KM G +P T+V V+
Sbjct: 279 FSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMH--SSGVLPSEFTLVGVI 327
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 114/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC + GK++H + F + + ++ MY+ CG D+R+ F+ ++
Sbjct: 326 VINACSDLCAVVEGKQMHSF-AFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQP 384
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W ++++G+ +N Y L+++ ++ + + P+ T V++AC +A + G +
Sbjct: 385 DVVLWTSIITGYVQNGDYEGGLNLYGKMQME-RVIPNELTMASVLRACSSLAALDQGKQM 443
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G +V + +AL AMY KC +++ +F MP R+++SWN++I G S+NG
Sbjct: 444 HARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHG 503
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L KM+ EG PD +T V +L
Sbjct: 504 NKALELFEKML--LEGIKPDPVTFVNLL 529
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 103/196 (52%), Gaps = 6/196 (3%)
Query: 107 CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT--RNL 164
C H K+I G+ +H + + S+ ++ NT + +Y+ + +FDS+ ++
Sbjct: 21 CTHNKNILKGRTLHARILKTGSISSIYVTNT-FLNLYAKTNHLSHALTLFDSINDNDKDD 79
Query: 165 FQWNALVSGFTKNELYTD---VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
WN+L++ F++N + +S+F + + P+ T V A ++DV G
Sbjct: 80 VSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQ 139
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
H +A K G GDV+V ++L+ MY K FV + KLF+ MPERN VSW ++I G++ +
Sbjct: 140 AHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDI 199
Query: 282 SCESFDLLIKMMGCEE 297
+ ++ ++ M EE
Sbjct: 200 ADKAVEVFELMRREEE 215
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 112/221 (50%), Gaps = 12/221 (5%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
K A +L AC ++ G+ +H ++ S F ++ ++ ++TMY CG ++R+VF
Sbjct: 247 KSAMVTILSACSSPALVQDGRLIHSCIALSG-FESELLVANAVMTMYGRCGAVEEARKVF 305
Query: 157 DSLKT--RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
D++ R++ WN ++S + N+ D + ++ + +L+ D T+ ++ AC
Sbjct: 306 DAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRM----QLRADKVTYVSLLSACSSAE 361
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
DVG G +H L +V V NAL++MY KC E +F+ M +R+++SW +II
Sbjct: 362 DVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIIS 421
Query: 275 GFSENGFSCESFDLLIKMM-----GCEEGFIPDVITVVTVL 310
+ E+ L +M+ G + PD + VT+L
Sbjct: 422 AYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTIL 462
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 113/215 (52%), Gaps = 10/215 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC +D+ +G+ +H+ + + + + I+ L++MY+ CG ++R VFD ++ R
Sbjct: 353 LLSACSSAEDVGLGRVLHKQI-VNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQR 411
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVEL------SSDTELKPDNFTFPCVIKACGGIADV 216
++ W ++S + + L + +F ++ S +KPD F ++ AC ++ +
Sbjct: 412 SIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSAL 471
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS-WNSIICG 275
G V AA GL D V A++ +YGKC +EE ++F+ + R V WN++I
Sbjct: 472 EQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAV 531
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+++ G S E+ L +M EG PD + V++L
Sbjct: 532 YAQFGQSHEALKLFWRME--MEGVRPDSFSFVSIL 564
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 3/174 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ C + + G+++H L + I+ +++MY+ C P D++ FD+L+ R
Sbjct: 49 LLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDALEQR 108
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL+ W LV+ F + + L + D ++PD TF + +CG + G +
Sbjct: 109 NLYSWTGLVAAFAISGQSKETLRALERMRQDG-VRPDAVTFITALGSCGDPESLRDGIRI 167
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE-RNLVSWNSIICG 275
H M L D VSNAL+ MY KC + ++F M RN++SW SI+ G
Sbjct: 168 HQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISW-SIMAG 220
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 69/131 (52%), Gaps = 4/131 (3%)
Query: 181 TDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI-GDVFVSN 239
+D+ S ++L ++ +N T+ +++ C + G +H +A K L+ G++ + N
Sbjct: 25 SDIASAVLDLEKQA-VRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGN 83
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
+++MY C + F+ + +RNL SW ++ F+ +G S E+ L +M ++G
Sbjct: 84 HIVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMR--QDGV 141
Query: 300 IPDVITVVTVL 310
PD +T +T L
Sbjct: 142 RPDAVTFITAL 152
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 22/185 (11%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E GK V E +AS S+D + T ++ +Y CG + RR+FD + +R
Sbjct: 461 ILNACADVSALEQGKMVSEQ-AASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSR 519
Query: 163 NLFQ-WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVG-- 217
Q WNA+++ + + + L +F + + ++PD+F+F ++ AC G+ D G
Sbjct: 520 PDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEG-VRPDSFSFVSILLACSHTGLEDQGKS 578
Query: 218 -FGS------GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
F S V G + D L+ G+ EE ++ V P + V+W
Sbjct: 579 YFTSMTTEYRNVTRTIQHFGCVAD------LLGRGGRLKEAEEFLEKLPVKP--DAVAWT 630
Query: 271 SIICG 275
S++
Sbjct: 631 SLLAA 635
>gi|359481504|ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Vitis vinifera]
Length = 538
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 95/160 (59%), Gaps = 3/160 (1%)
Query: 151 DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
D+ +F + RN+ WNA++SG+++ + +++FV + + L P+ TFPC I A
Sbjct: 195 DALALFRKMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGTL-PNERTFPCAISAV 253
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
IA +G G HG A K DVF+ N+L++ Y KC +EE + +F +P++N+VSWN
Sbjct: 254 ANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVSFYAKCGSMEESLLVFNTLPKKNIVSWN 313
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ICG++ +G E+ KM + G P+ +T++ +L
Sbjct: 314 ALICGYANHGRGMEAIYFFEKMQ--DTGLRPNSVTLLGLL 351
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 34/200 (17%)
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
I+ ++ YS D+ ++FD + ++ A + F + + + + F + +
Sbjct: 46 ILEPDIVCSYSASKALWDACKLFDEVPNWDVVSATATIGCFARYHHHEEAIYFFSRMLA- 104
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+KP+ F+F VI + + D+ G +H A KMGL +VFV +A++ Y K + E
Sbjct: 105 LNIKPNQFSFGTVIPSSTALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYAKLTSINE 164
Query: 254 MVK-------------------------------LFEVMPERNLVSWNSIICGFSENGFS 282
K LF MPERN+VSWN++I G+S+ G++
Sbjct: 165 AQKAFEDTHEPNVVSYTTLIRGYLKKERFDDALALFRKMPERNVVSWNAMISGYSQMGYN 224
Query: 283 CESFDLLIKMMGCEEGFIPD 302
E+ +L + M+ EG +P+
Sbjct: 225 EEAVNLFVVML--REGTLPN 242
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I L++ Y+ CG +S VF++L +N+ WNAL+ G+ + + + F E
Sbjct: 277 DVFIGNSLVSFYAKCGSMEESLLVFNTLPKKNIVSWNALICGYANHGRGMEAIYFF-EKM 335
Query: 192 SDTELKPDNFTFPCVIKACG--GIADVGF 218
DT L+P++ T ++ AC G+ D G+
Sbjct: 336 QDTGLRPNSVTLLGLLLACNHSGLVDKGY 364
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 118/209 (56%), Gaps = 7/209 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++ACG D+ GK++H LV F D + L+ MYS G D+R++FD + R
Sbjct: 3 VVKACG---DLLDGKKIHCLV-LKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPAR 58
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA++SG+ +N + L I E+ + +K D T V+ C + D+ G +
Sbjct: 59 DRGSWNAMISGYCQNGNAAEALDIADEMRLEG-VKMDAITVASVLPVCAQVGDILSGKLI 117
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K GL ++FVSNALI MY K + K+F ++ +++VSWN++I G+++NG +
Sbjct: 118 HLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNGLA 176
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ ++ + M EE IP+ T V++LP
Sbjct: 177 SEAIEVYLLMEEHEE-IIPNQGTWVSILP 204
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 110/209 (52%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L C DI GK +H ++ +F + ++ LI MY+ G +++VF L
Sbjct: 101 VLPVCAQVGDILSGKLIHLYVIKHGLEF--ELFVSNALINMYAKFGSLGHAQKVF-GLLI 157
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+++ WN L++G+ +N L ++ + +++ + E+ P+ T+ ++ A + + G
Sbjct: 158 KDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMR 217
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG K L DVFV LI MYGKC +++ + LF +P +N V WN++I + +G
Sbjct: 218 IHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGD 277
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L +M E PD IT V++L
Sbjct: 278 GEKALELFREMKA--ERVKPDHITFVSLL 304
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 65/108 (60%), Gaps = 5/108 (4%)
Query: 204 PCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 263
P V+KACG + D G +H + K+G DVFV+ +L+ MY + V + KLF+ MP
Sbjct: 1 PPVVKACGDLLD---GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPA 57
Query: 264 RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
R+ SWN++I G+ +NG + E+ D+ +M EG D ITV +VLP
Sbjct: 58 RDRGSWNAMISGYCQNGNAAEALDIADEMR--LEGVKMDAITVASVLP 103
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 85/175 (48%), Gaps = 8/175 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L A H ++ G R+H V + +S D + T LI MY CG D+ +F + +
Sbjct: 202 ILPAYSHVGALQQGMRIHGQVIKNCLYS-DVFVGTCLIDMYGKCGKLDDAISLFYQVPRK 260
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC---GGIADVGFG 219
N WNA++S + + L +F E+ ++ +KPD+ TF ++ AC G ++D +
Sbjct: 261 NSVPWNAMISCYGVHGDGEKALELFREMKAE-RVKPDHITFVSLLSACSHSGLVSDAQWC 319
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
+ M + G+ + ++ ++G+ +E + MP + + +W +++
Sbjct: 320 FNM--MEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALL 372
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 102/183 (55%), Gaps = 3/183 (1%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F+ D + + LI +Y+ G D+RR+FD + ++ WN +++GF K + +F
Sbjct: 3 FNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFE 62
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
++ + + KP++ TF V+ C A FG+ +HG+ G D V+NAL+AMY K
Sbjct: 63 DMR-NCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
+ + +KLF MP+ N+V+WN +I GF +NGF E+ L +M+ G PD IT +
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMI--SAGVSPDSITFAS 179
Query: 309 VLP 311
LP
Sbjct: 180 FLP 182
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 109/209 (52%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C E E G ++H LV S F D ++ L+ MYS G D+ ++F+++
Sbjct: 79 VLSICASEALSEFGNQLHGLV-ISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDT 137
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN +++GF +N + +F E+ S + PD+ TF + + A + G +
Sbjct: 138 NVVTWNGMIAGFVQNGFMDEASLLFSEMIS-AGVSPDSITFASFLPSVTESASLKQGKEI 196
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + G+ DVF+ +ALI +Y KC V K+F+ ++V +II G+ NG +
Sbjct: 197 HGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLN 256
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ ++ ++ EE P+ +T+ +VLP
Sbjct: 257 NDALEIFRWLL--EEKMSPNAVTLASVLP 283
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + +GK +H + + + ++ MY+ CG + ++F + +
Sbjct: 281 VLPACAGLATLNLGKELHANI-LKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEK 339
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA+++ ++N + + +F ++ + L D + + AC + + G +
Sbjct: 340 DAVCWNAIITNCSQNGKPQEAIDLFRQMGREG-LSYDCVSISAALSACANLPALHHGKAI 398
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K +VF +ALI MYGKC + +F++M E+N VSWNSII + +G
Sbjct: 399 HSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHL 458
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
S L KM+ E+G PD +T +T+L
Sbjct: 459 EVSLALFHKML--EDGIQPDHVTFLTIL 484
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 4/195 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK +H + + D + + LI +Y C + ++F ++ A++SG+
Sbjct: 193 GKEIHGYI-LRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYV 251
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
N L D L IF L + ++ P+ T V+ AC G+A + G +H K GL
Sbjct: 252 LNGLNNDALEIFRWLLEE-KMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERR 310
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
V +A++ MY KC ++ ++F MPE++ V WN+II S+NG E+ DL + MG
Sbjct: 311 HVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLF-RQMG- 368
Query: 296 EEGFIPDVITVVTVL 310
EG D +++ L
Sbjct: 369 REGLSYDCVSISAAL 383
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 3/160 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + + GK +H + F ++ + LI MY CG +R VFD ++ +N
Sbjct: 383 LSACANLPALHHGKAIHSFMIKGA-FDSEVFAESALIDMYGKCGNLSVARCVFDMMREKN 441
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG-SGV 222
WN++++ + + L++F ++ D ++PD+ TF ++ ACG V G
Sbjct: 442 EVSWNSIIAAYGSHGHLEVSLALFHKMLEDG-IQPDHVTFLTILSACGHAGQVDKGIQYF 500
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
M + G+ + ++ ++G+ + E + + MP
Sbjct: 501 RCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMP 540
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 229 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
MG D FV ++LI +Y + +E+ +LF+ MP ++ V WN ++ GF + G + +
Sbjct: 1 MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60
Query: 289 LIKMMGCEEGFIPDVITVVTVL 310
M C+ P+ IT +VL
Sbjct: 61 FEDMRNCQTK--PNSITFASVL 80
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 129/242 (53%), Gaps = 11/242 (4%)
Query: 65 HFLQEITTLCEESKSLNKALSL-LQENLHNADLKEATGV---LLQACGHEKDIEIGKRVH 120
H++ + T L S + N L + + ++N L+ + LL+ C ++ GK VH
Sbjct: 55 HYIIDDTNLLRPSLNPNSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVH 114
Query: 121 ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELY 180
+ +++F ND +I ++ MY+ CG +R+VFD + +++ W ++++G++++
Sbjct: 115 THL-MNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYA 173
Query: 181 ---TDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFV 237
T L +F+E+ D L+P+ F ++K CG + G +HG K G +VFV
Sbjct: 174 SSATTALVLFLEMVRDG-LRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFV 232
Query: 238 SNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEE 297
++L+ MY +C + E +F+ + +N VSWN++I GF+ G E+ L +KM E
Sbjct: 233 GSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQ--RE 290
Query: 298 GF 299
GF
Sbjct: 291 GF 292
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 111/214 (51%), Gaps = 7/214 (3%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A L++ CG GK++H F + + + L+ MY+ CG +SR VFD
Sbjct: 197 ALSSLVKCCGFLGSCVDGKQIHG-CCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDE 255
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
L+++N WNAL+SGF + + L +FV++ + FT+ ++ + +
Sbjct: 256 LESKNEVSWNALISGFARKGEGEEALGLFVKMQREG-FGATEFTYSALLCSSSTTGSLEQ 314
Query: 219 GSGVHGMAAKMG--LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G +H K G L+G +V N L+ MY K + + K+F+ + + ++VS NS++ G+
Sbjct: 315 GKWLHAHMMKSGKKLVG--YVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGY 372
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+++G E+ +L +MM E P+ IT ++VL
Sbjct: 373 AQHGLGKEAVELFEEMMLWVE-IEPNDITFLSVL 405
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E GK +H + S + ++ NT L+ MY+ G D+++VFD L ++ N+++
Sbjct: 312 LEQGKWLHAHMMKSGKKLVGYVGNT-LLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLI 370
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G+ ++ L + + +F E+ E++P++ TF V+ AC + G + K GL
Sbjct: 371 GYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLE 430
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
+ ++ ++G+ +++ E MP E N W +++
Sbjct: 431 PKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALL 472
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 97/187 (51%), Gaps = 1/187 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++ CG D +GK++H L D + T L+ MY LD R+VF+ + R
Sbjct: 61 IIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKR 120
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W +L++G+ + + DV+S+F + ++ + P+ FTF V+ V G V
Sbjct: 121 NVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEG-VWPNPFTFSSVLSMVASQGMVDLGQHV 179
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + K G VFV N+L+ MY KC VEE +F M R++VSWN+++ G NG
Sbjct: 180 HAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRD 239
Query: 283 CESFDLL 289
E+ L
Sbjct: 240 LEALQLF 246
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 103/202 (50%), Gaps = 11/202 (5%)
Query: 113 IEIGKRVHELVSASTQF---SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNA 169
+++G+ VH + S +F S F+ N+ L+ MY+ CG ++R VF ++TR++ WN
Sbjct: 173 VDLGQHVH---AQSIKFGCCSTVFVCNS-LMNMYAKCGLVEEARVVFCRMETRDMVSWNT 228
Query: 170 LVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM 229
L++G N + L +F + S + ++ T+ VI C + +G +H K
Sbjct: 229 LMAGLVLNGRDLEALQLFHDSRSSITMLTES-TYSTVINLCANLKHLGLARQLHSSVLKH 287
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENGFSCESFDL 288
G V AL+ Y K +++ + +F +M +N+VSW ++I G +NG + L
Sbjct: 288 GFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAAL 347
Query: 289 LIKMMGCEEGFIPDVITVVTVL 310
+M E+G P+ +T T+L
Sbjct: 348 FSRMR--EDGVAPNDLTYSTIL 367
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 94/177 (53%), Gaps = 4/177 (2%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ T L+ YS ++ +F + +++ W+A+++ + + + F++++
Sbjct: 393 VGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHG 452
Query: 195 ELKPDNFTFPCVIKACGG-IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
LKP+ FT I AC A V G H ++ K + VS+AL++MY + +E
Sbjct: 453 -LKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIEN 511
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+FE +R+L+SWNS++ G++++G+S ++ D+ +M EG D +T ++V+
Sbjct: 512 AQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQME--VEGIDMDGLTFLSVI 566
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGL-IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
+IK CG + D G +H + + G GD+ V +L+ MY V + K+FE M +R
Sbjct: 61 IIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKR 120
Query: 265 NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
N+V+W S++ G+ + G + L +M EG P+ T +VL
Sbjct: 121 NVVTWTSLLTGYIQAGVLLDVMSLFFRMRA--EGVWPNPFTFSSVL 164
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 101/217 (46%), Gaps = 10/217 (4%)
Query: 96 LKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRR 154
L E+T ++ C + K + + +++H V F + + T L+ Y+ G +
Sbjct: 256 LTESTYSTVINLCANLKHLGLARQLHSSV-LKHGFHSYGNVMTALMDAYNKAGQLDKALD 314
Query: 155 VFDSLK-TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
VF + ++N+ W A++ G +N ++F + D + P++ T+ ++ +
Sbjct: 315 VFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDG-VAPNDLTYSTILT----V 369
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
++ F +H K V AL+ Y K EE + +F+++ ++++VSW++++
Sbjct: 370 SEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAML 429
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+++ G + + IKM G P+ T+ + +
Sbjct: 430 TCYAQAGDCNGATNAFIKMT--MHGLKPNEFTISSAI 464
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+++G++ H +S + + +++ L++MY+ G +++ VF+ R+L WN+++S
Sbjct: 474 VDLGRQFHA-ISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLS 532
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG-MAAKMGL 231
G+ ++ L +F ++ + + D TF VI C V G M G+
Sbjct: 533 GYAQHGYSQKALDVFRQMEVEG-IDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGI 591
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ ++ +Y + ++E + L E MP
Sbjct: 592 TPTMDHYACMVDLYSRAGKLDETMSLIEGMP 622
>gi|302776722|ref|XP_002971510.1| hypothetical protein SELMODRAFT_172234 [Selaginella moellendorffii]
gi|300160642|gb|EFJ27259.1| hypothetical protein SELMODRAFT_172234 [Selaginella moellendorffii]
Length = 357
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
S +D ++ T L+ MY+ CG + +R FD+L ++N+ WNA+++G+ + + L
Sbjct: 65 SRGLESDTVVGTALVNMYARCGDVVTARTNFDNLCSKNIVSWNAMIAGYVQAGSSQEALL 124
Query: 186 IFVELSSDTELKP--DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIA 243
++ ++ D E KP D TF V+ AC + ++ G +H A D+ V NAL+
Sbjct: 125 LYEKMQQD-EAKPKADGLTFASVLAACSNLGEISRGRKLHDDVAASDFAEDLIVQNALVD 183
Query: 244 MYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
MYGKC + E +FE + R+++SW S++ ++ +G E+ +L+ +M EG D
Sbjct: 184 MYGKCGNLVESRNVFEGIKSRSVISWTSMVTAYARHGHGAEAVELVWRM--SLEGVEADD 241
Query: 304 ITVVTVL 310
+T+ ++L
Sbjct: 242 VTLTSIL 248
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 103/201 (51%), Gaps = 20/201 (9%)
Query: 86 LLQENLHNADLK-EATGV----LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLI 140
LL E + + K +A G+ +L AC + +I G+++H+ V+AS F+ D I+ L+
Sbjct: 124 LLYEKMQQDEAKPKADGLTFASVLAACSNLGEISRGRKLHDDVAAS-DFAEDLIVQNALV 182
Query: 141 TMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDN 200
MY CG ++SR VF+ +K+R++ W ++V+ + ++ + + + +S + ++ D+
Sbjct: 183 DMYGKCGNLVESRNVFEGIKSRSVISWTSMVTAYARHGHGAEAVELVWRMSLEG-VEADD 241
Query: 201 FTFPCVIKAC--GGIADVG---FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
T +++AC G+ D FG+ V ++ + + L+ + G+ ++EE
Sbjct: 242 VTLTSILQACSHSGLVDAAGSVFGTVVRDQGMELSIEHKL----CLMDLLGRTGWIEEAE 297
Query: 256 KLF---EVMPERNLVSWNSII 273
+ E + R SW S +
Sbjct: 298 EFLASSEDLKAR-AASWTSFL 317
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 32/146 (21%)
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
+PD FTF + AC + + G +H K L+ D+ + NAL+ MY KC + ++ K
Sbjct: 4 EPDVFTFSTLFSACSNLRSLDAGRAIHKRLGK-SLVSDLILQNALLNMYSKCGSLADVRK 62
Query: 257 L-------------------------------FEVMPERNLVSWNSIICGFSENGFSCES 285
+ F+ + +N+VSWN++I G+ + G S E+
Sbjct: 63 IISRGLESDTVVGTALVNMYARCGDVVTARTNFDNLCSKNIVSWNAMIAGYVQAGSSQEA 122
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVLP 311
L KM E D +T +VL
Sbjct: 123 LLLYEKMQQDEAKPKADGLTFASVLA 148
>gi|449459276|ref|XP_004147372.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 502
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L++C I K+ H + F + T L+ +Y CGF D+R VFD + R
Sbjct: 13 VLRSCAQSYAIAQAKQAHAQILIH-GFLPHLTLLTDLLLVYCKCGFLHDARNVFDKMAHR 71
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN L++ + N Y D L++F E L PD++T P + KA GI D G +
Sbjct: 72 NMHSWNILIASYVHNSFYFDALNVFNEFRHLGFL-PDHYTLPQMFKASVGIGDAYLGKRL 130
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K+G +G V V + ++ Y KC V + K+F+ M ++ VSWNS+I G+ G
Sbjct: 131 HCWTIKLGFVGYVVVGSTVLDFYAKCGIVGDARKVFDDMIFKDTVSWNSMISGYGRAGVY 190
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ D +M+ EG D +T+ +VL
Sbjct: 191 MDALDCFKRML--LEGANMDFMTIPSVL 216
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 5/200 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
D +GKR+H + F ++ + ++ Y+ CG D+R+VFD + ++ WN+++
Sbjct: 123 DAYLGKRLH-CWTIKLGFVGYVVVGSTVLDFYAKCGIVGDARKVFDDMIFKDTVSWNSMI 181
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
SG+ + +Y D L F + + D T P V+ ACGG D+ G +H + K +
Sbjct: 182 SGYGRAGVYMDALDCFKRMLLEGA-NMDFMTIPSVLNACGGEGDLRKGKEIHCLVLKSPV 240
Query: 232 IG-DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
DV V N+LI MY KC + K+F M N+V+W ++I + +G +S L
Sbjct: 241 FAADVAVGNSLIDMYSKCGSLLNSEKVFWNMSRLNIVTWTTMISCYGAHGKGEKSLVLFN 300
Query: 291 KMMGCEEGFIPDVITVVTVL 310
KM C G P+ +T+ +L
Sbjct: 301 KMKDC--GIQPNSVTLTAIL 318
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG E D+ GK +H LV S F+ D + LI MYS CG L+S +VF ++
Sbjct: 215 VLNACGGEGDLRKGKEIHCLVLKSPVFAADVAVGNSLIDMYSKCGSLLNSEKVFWNMSRL 274
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
N+ W ++S + + L +F ++ D ++P++ T ++ +C
Sbjct: 275 NIVTWTTMISCYGAHGKGEKSLVLFNKM-KDCGIQPNSVTLTAILASC 321
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 203 FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
F V+++C + H G + + + L+ +Y KC F+ + +F+ M
Sbjct: 10 FSFVLRSCAQSYAIAQAKQAHAQILIHGFLPHLTLLTDLLLVYCKCGFLHDARNVFDKMA 69
Query: 263 ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
RN+ SWN +I + N F ++ ++ + GF+PD T+
Sbjct: 70 HRNMHSWNILIASYVHNSFYFDALNVFNEFR--HLGFLPDHYTL 111
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 121/241 (50%), Gaps = 6/241 (2%)
Query: 69 EITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQ 128
E+ LC + L +AL LL+ + D ++A L + C + +E G R
Sbjct: 62 ELRALCSHGQ-LAQALWLLESSAEPPD-EDAYVALFRLCEWRRAVEPGLRACAHADDRHA 119
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
+ + +++M G + RVF + R++F WN +V G+ K+ L + L ++
Sbjct: 120 WFG-LRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYH 178
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
+ ++PD +TFPCV+++CGG+ D G VH + G +V V NAL+ MY KC
Sbjct: 179 RMMW-AGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKC 237
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
V K+F+ M + +SWN++I G ENG +L + M+ + P+++T+ +
Sbjct: 238 GDVMAARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTML--HDEVQPNLMTITS 295
Query: 309 V 309
V
Sbjct: 296 V 296
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 108/204 (52%), Gaps = 4/204 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L++CG D +G+ VH V F + + L+TMY+ CG + +R+VFDS+
Sbjct: 195 VLRSCGGVPDWRMGREVHAHV-LRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVM 253
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA+++G +N L +F+ + D E++P+ T V A G ++DV F +
Sbjct: 254 DCISWNAMIAGHFENGECNAGLELFLTMLHD-EVQPNLMTITSVTVASGLLSDVTFAKEM 312
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+A K G GDV N+LI MY + + +F M R+ ++W ++I G+ +NGF
Sbjct: 313 HGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFP 372
Query: 283 CESFDLLIKMMGCEEGFIPDVITV 306
++ ++ M PD IT+
Sbjct: 373 DKALEVYALME--VNNVSPDDITI 394
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 6/222 (2%)
Query: 76 ESKSLNKALSLLQENLHN---ADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSND 132
E+ N L L LH+ +L T V + A G D+ K +H L + F+ D
Sbjct: 267 ENGECNAGLELFLTMLHDEVQPNLMTITSVTV-ASGLLSDVTFAKEMHGL-AVKRGFAGD 324
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
LI MY+ G +R VF + TR+ W A++SG+ KN L ++ L
Sbjct: 325 VAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYA-LME 383
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ PD+ T + AC + + G +H +A G I + V+NA++ MY K ++
Sbjct: 384 VNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRID 443
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
+ +++F+ M E+++VSW+S+I GF N + E+ M+
Sbjct: 444 KAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLA 485
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 97/198 (48%), Gaps = 5/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+++G ++HEL + S F + ++ ++ MY+ + VF + +++ W+++++
Sbjct: 407 LDVGVKLHEL-AESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIA 465
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
GF N + L F + +D +KP++ TF + AC + G +H + G+
Sbjct: 466 GFCFNHRNFEALYYFRHMLAD--VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIE 523
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ ++ NALI +Y KC F +++VSWN +I GF +G + +M
Sbjct: 524 YEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQM 583
Query: 293 MGCEEGFIPDVITVVTVL 310
+ + G PD +T V +L
Sbjct: 584 V--KIGECPDEVTFVALL 599
>gi|302817567|ref|XP_002990459.1| hypothetical protein SELMODRAFT_131642 [Selaginella moellendorffii]
gi|300141844|gb|EFJ08552.1| hypothetical protein SELMODRAFT_131642 [Selaginella moellendorffii]
Length = 830
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 113/209 (54%), Gaps = 9/209 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS-LKT 161
++ AC + G+RVH + S F + T L+ MY+ CG ++RRVFD+ L
Sbjct: 115 VINACSESGSLAEGRRVHRRIQGS-DFEWSVDVGTALVRMYAKCGSVDEARRVFDNRLLR 173
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N+ W +VS + + L++F+E+ + + P+ T+ V+ AC D+ G
Sbjct: 174 KNIVSWTTMVSAYVERGCLEQALTLFIEMLQEG-VAPNEITYVSVLNAC----DLDAGRK 228
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH + + GL D FV NALI MY +C +E+ +F+ + +RNL+ WNS+I G++
Sbjct: 229 VHRLIEQSGLDSDAFVGNALIKMYRRCGSLEDASLVFDGIADRNLLVWNSMIAGYASLNE 288
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + + KM+ +G+ D T++TVL
Sbjct: 289 AQGTLEFFRKML--LDGWKGDKHTLLTVL 315
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 14/213 (6%)
Query: 103 LLQAC---GHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
+L AC G +E GK+ HE + + D ++ T L+ MY+ CG D++ VF+ +
Sbjct: 417 ILSACTATGSSLGLETGKKTHEEI-LEQGYRLDAVLGTALVRMYAACGRLDDAKLVFEKM 475
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIF--VELSSDTELKPDNFTFPCVIKACGGIADVG 217
++R+L W ++ +T+ L + F ++L T PD + AC ++
Sbjct: 476 ESRDLISWTTMLGAYTQARLLDEASITFRRIQLEGHT---PDRVALIAALGACTNLSS-- 530
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
H ++G D V+NAL+ +Y C +E+ + F+ + E +++SWN +I +
Sbjct: 531 -ARDFHERIRQLGWEKDPLVANALLEVYSACGSLEDANETFDGIGEPSVISWNLLIAAHT 589
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G +FDLL M +G PD +T+ TV+
Sbjct: 590 RLGHPDRAFDLLRAME--LQGHNPDSVTLATVI 620
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 5/196 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK +H + S + + ++ MY +C ++R+VFD + +R+ W +++ +
Sbjct: 27 GKELHAQI-VSDGLDKNLHLANGIVHMYLVCKSVDNARKVFDKMASRDAGLWAPMMAAYA 85
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+ + +F + D + PD T VI AC + G VH V
Sbjct: 86 RVGHLQEATGLFHRML-DEGVVPDRVTLLTVINACSESGSLAEGRRVHRRIQGSDFEWSV 144
Query: 236 FVSNALIAMYGKCAFVEEMVKLFE-VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
V AL+ MY KC V+E ++F+ + +N+VSW +++ + E G ++ L I+M+
Sbjct: 145 DVGTALVRMYAKCGSVDEARRVFDNRLLRKNIVSWTTMVSAYVERGCLEQALTLFIEML- 203
Query: 295 CEEGFIPDVITVVTVL 310
+EG P+ IT V+VL
Sbjct: 204 -QEGVAPNEITYVSVL 218
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 103/213 (48%), Gaps = 9/213 (4%)
Query: 103 LLQACGHEKDIEIG--KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L AC ++ + +H+L + + +D ++ T L+ + S G ++ VFDSL+
Sbjct: 314 VLDACAKSSTLQASSLQTIHDL-AVESGLDSDTLVGTALVKIKSEQGDRKSAKMVFDSLR 372
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC---GGIADVG 217
++L WN + S + K+ D + + ++ D +++PD TF ++ AC G +
Sbjct: 373 AKDLAAWNCMFSAYAKHGRLRDAMELQEQMKLD-QVRPDKVTFVSILSACTATGSSLGLE 431
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G H + G D + AL+ MY C +++ +FE M R+L+SW +++ ++
Sbjct: 432 TGKKTHEEILEQGYRLDAVLGTALVRMYAACGRLDDAKLVFEKMESRDLISWTTMLGAYT 491
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ ++ EG PD + ++ L
Sbjct: 492 QARLLDEASITFRRIQ--LEGHTPDRVALIAAL 522
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ A G ++ + HE + + D ++ L+ +YS CG D+ FD +
Sbjct: 518 LIAALGACTNLSSARDFHERIR-QLGWEKDPLVANALLEVYSACGSLEDANETFDGIGEP 576
Query: 163 NLFQWNALVSGFTK---NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
++ WN L++ T+ + D+L +EL PD+ T VI + + G
Sbjct: 577 SVISWNLLIAAHTRLGHPDRAFDLLRA-MELQGH---NPDSVTLATVINSRASLQLFRKG 632
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE-VMPERNLVSWNSIICGFSE 278
+H + G+ D V+ AL+ YGKC +F+ V N+V+WNS + +++
Sbjct: 633 KIIHDSILEAGMEIDSVVATALVNFYGKCGDFATARSIFQGVGAADNVVTWNSTLAAYAQ 692
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+G + E+ +L +M+ ++G P +T V+VL
Sbjct: 693 SGHASEALHVLAEMV--QQGVAPTAVTFVSVL 722
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 104/209 (49%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C + G +VH + + F D I+N LI MY C + VFD + R
Sbjct: 10 LLRNCSKNGLFDQGLQVHA-AAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLER 68
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W AL+ G+ + L++ E+ + +KP+ FTF +KACG + V G +
Sbjct: 69 NVVSWTALMCGYLQEGNAKGSLALLCEMGY-SGVKPNEFTFSTSLKACGALGVVENGMQI 127
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HGM K G V NA I MY KC + ++F MP RNLVSWN++I G + G
Sbjct: 128 HGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNG 187
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+S L +M G +G +PD T + L
Sbjct: 188 RKSLVLFQRMQG--QGEVPDEFTFTSTLK 214
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 103/191 (53%), Gaps = 4/191 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+ACG +E G ++H + S F ++ I MYS CG + +VF+ + RN
Sbjct: 112 LKACGALGVVENGMQIHGMCVKSG-FEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRN 170
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L WNA+++G T L +F + E+ PD FTF +KACG + + G+ +H
Sbjct: 171 LVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEV-PDEFTFTSTLKACGALGAIRGGTQIH 229
Query: 224 GMAAKMGLIGDV--FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
G + +++A++ +Y KC ++ E K+F+ + ++NL+SW+++I GF++ G
Sbjct: 230 ASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGN 289
Query: 282 SCESFDLLIKM 292
E+ DL ++
Sbjct: 290 LLEAMDLFRQL 300
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 99/190 (52%), Gaps = 2/190 (1%)
Query: 104 LQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ACG I G ++H L++ S II + ++ +Y+ CG+ ++++VFD ++ +
Sbjct: 213 LKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQK 272
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL W+AL+ GF + + + +F +L D F ++ +A V G +
Sbjct: 273 NLISWSALIQGFAQEGNLLEAMDLFRQLRESVS-NVDGFVLSIMMGVFADLALVEQGKQM 331
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K+ D+ V+N++I MY KC EE +LF M RN+VSW +I G+ ++G
Sbjct: 332 HCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLG 391
Query: 283 CESFDLLIKM 292
++ L +M
Sbjct: 392 EKAIHLFNRM 401
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E GK++H + D + +I MY CG ++ R+F ++ RN+ W +++
Sbjct: 325 VEQGKQMHCYI-LKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMIT 383
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
G+ K+ L + +F + D ++ D + ++ AC
Sbjct: 384 GYGKHGLGEKAIHLFNRMQLDG-IELDEVAYLALLSAC 420
>gi|6729034|gb|AAF27030.1|AC009177_20 hypothetical protein [Arabidopsis thaliana]
Length = 548
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 123/236 (52%), Gaps = 15/236 (6%)
Query: 77 SKSLNKALSLLQENLHNADLKE--ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFI 134
S + +KAL QE L + +L+AC +DI+ G VH V T F +
Sbjct: 85 SPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFV-VKTGFEVNMY 143
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
++T L+ MY CG RVF+ + N+ W +L+SGF N ++D + F E+ S+
Sbjct: 144 VSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNG 203
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+K + ++ ACG D F S K+G +V ++ +LI MY KC +
Sbjct: 204 -VKANETIMVDLLVACGRCFDPYFQS-------KVGF--NVILATSLIDMYAKCGDLRTA 253
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
LF+ MPER LVSWNSII G+S+NG + E+ + + M+ + G PD +T ++V+
Sbjct: 254 RYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDML--DLGIAPDKVTFLSVI 307
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 93/165 (56%), Gaps = 5/165 (3%)
Query: 118 RVHELVSASTQFSNDFIINTRLITMYSLCGFPLD---SRRVFDSLKTRNLFQWNALVSGF 174
++H L+ S+ N I +RLI + C ++ +R VF+S+ +++ WN+++ G+
Sbjct: 24 QLHGLMIKSSVIRN-VIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGY 82
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
+ N D IF + PD FTFP V+KAC G+ D+ FGS VHG K G +
Sbjct: 83 S-NSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVN 141
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
++VS L+ MY C V +++FE +P+ N+V+W S+I GF N
Sbjct: 142 MYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNN 186
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 94/180 (52%), Gaps = 4/180 (2%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ I+ T LI MY+ CG +R +FD + R L WN++++G+++N + L +F+++
Sbjct: 233 NVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDML 292
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
D + PD TF VI+A G +H +K G + D + AL+ MY K
Sbjct: 293 -DLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDA 351
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEG-FIPDVITVVTVL 310
E K FE + +++ ++W +I G + +G E+ + +M E+G PD IT + VL
Sbjct: 352 ESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQ--EKGNATPDGITYLGVL 409
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 10/181 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++Q C ++G+ +H VS T F D I L+ MY+ G +++ F+ L+ +
Sbjct: 311 MIQGCS-----QLGQSIHAYVS-KTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKK 364
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W ++ G + + LSIF + PD T+ V+ AC I V G
Sbjct: 365 DTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRY 424
Query: 223 HG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSII--CGFSE 278
M GL V ++ + + EE +L + MP + N+ W +++ C E
Sbjct: 425 FAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHE 484
Query: 279 N 279
N
Sbjct: 485 N 485
>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
Length = 712
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 114/207 (55%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + IG ++H L+ + N++I + LI+ Y+ C ++ +F+ +RN
Sbjct: 246 LTACANICTPFIGVQIHGLIVKTGYCFNEYI-SASLISFYANCKLIDNASSIFNDNVSRN 304
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W AL++G+ N +TD L +F + + L P+ + + +C G+ V G VH
Sbjct: 305 VVVWTALLTGYGLNCRHTDALQVFKGMMRMSVL-PNQSSLTSALNSCCGLEAVDRGREVH 363
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+A K+GL D+FVSN+L+ MY KC + + + +F M +N+VSWNSII G +++GF
Sbjct: 364 AVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGR 423
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L +M+ PD IT+ +L
Sbjct: 424 WALTLFAQMI--RTRVDPDEITLAGLL 448
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 5/139 (3%)
Query: 151 DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
D+ +F+ + RN+ W +++ G N + L +F ++ + K + T C + AC
Sbjct: 192 DAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKMLAS--FKATSSTLACALTAC 249
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
I G +HG+ K G + ++S +LI+ Y C ++ +F RN+V W
Sbjct: 250 ANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLIDNASSIFNDNVSRNVVVWT 309
Query: 271 SIICGFSENGFSCESFDLL 289
+++ G+ G +C D L
Sbjct: 310 ALLTGY---GLNCRHTDAL 325
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 9/178 (5%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
T L CG E ++ G+ VH V+ +D ++ L+ MY+ CG D VF +
Sbjct: 344 TSALNSCCGLEA-VDRGREVHA-VAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRM 401
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVG 217
+N+ WN+++ G ++ L++F ++ T + PD T ++ ACG G+ G
Sbjct: 402 SRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIR-TRVDPDEITLAGLLSACGHSGMLTKG 460
Query: 218 FGSGVH-GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSII 273
H G + + + + S ++ + G+ +EE L +MP + N + W +++
Sbjct: 461 RCFFKHFGKNFGIEMTNEHYSS--MVDLLGRYGQLEEAEALIHIMPGKANYMVWLALL 516
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
T +I Y+ G D+ ++F + ++L WN+++ G K T ++F ++S
Sbjct: 85 TMMIGGYADEGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLTMACNMFDKMS----- 139
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
+ + ++ +I G+ + G + M DV N+++ + VE+ ++
Sbjct: 140 ERNVVSWTTIIN---GLLEFGRVEVAECLFRVMP-TKDVTAWNSMVHGFFSNGRVEDAIE 195
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
LFE MP RN++SW S+I G NG S E+ + KM+
Sbjct: 196 LFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKMLA 233
>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
Length = 716
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 118/223 (52%), Gaps = 6/223 (2%)
Query: 88 QENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCG 147
Q+N+ ++ AT ++ AC + G+ +H V SN FI + L+ MY CG
Sbjct: 259 QDNVPPSEYTIAT--VITACSALFGLHQGRWMHGSVIKQGLMSNSFI-SAALLDMYVKCG 315
Query: 148 FPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVI 207
+R VFD L +L W ++ G+T+N D L +F++ + P++ T V+
Sbjct: 316 ELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLD-KRFANIAPNSVTTATVL 374
Query: 208 KACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLV 267
A + D+ G +HG+A K+GL+ V NAL+ MY KC V E ++F + +++V
Sbjct: 375 SASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVV 434
Query: 268 SWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+WNS+I G++EN ++ +L K M +G PD I+VV L
Sbjct: 435 AWNSMISGYAENNMGDDAL-MLFKQMSL-QGSSPDAISVVNAL 475
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 108/211 (51%), Gaps = 4/211 (1%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
T +L A +D+ +GK +H L + ++ L+ MY+ C ++ R+F +
Sbjct: 370 TATVLSASAQLRDLSLGKSIHGL-AVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRI 428
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+++ WN+++SG+ +N + D L +F ++S PD + + A + D+ G
Sbjct: 429 SNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGS-SPDAISVVNALSASVCLGDLLIG 487
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+HG A K + +++V AL+ +Y KC + ++F+ M +RN V+W ++I G+
Sbjct: 488 KSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQ 547
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G S S L +M+ ++G P+ I ++L
Sbjct: 548 GDSAGSIHLFGEML--KDGVYPNDIAFTSIL 576
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 91/176 (51%), Gaps = 5/176 (2%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
T+L++ Y+ G +R VFD + + + A++ + E + D +++ ++
Sbjct: 101 TKLLSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPC 160
Query: 197 --KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
D+F +KAC A+ +G +H A K+G D FV N+L+ MY K +E
Sbjct: 161 PEAQDDFVLSLALKACIRSAEYSYGRSLHCDAIKVG-GADGFVMNSLVDMYAKAEDLECA 219
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+FE +P+RN+VSW S+I G +NGF+ + L KM ++ P T+ TV+
Sbjct: 220 RKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMR--QDNVPPSEYTIATVI 273
>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
Length = 683
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 118/223 (52%), Gaps = 6/223 (2%)
Query: 88 QENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCG 147
Q+N+ ++ AT ++ AC + G+ +H V SN FI + L+ MY CG
Sbjct: 226 QDNVPPSEYTIAT--VITACSALIGLHQGRWMHGSVIKQGLMSNSFI-SAALLDMYVKCG 282
Query: 148 FPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVI 207
D++ VFD L +L W ++ G+T+N D L +F++ + P++ T V+
Sbjct: 283 ELEDAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLD-KKFANIVPNSVTIATVL 341
Query: 208 KACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLV 267
A + D+ G +HG+A K+GL+ V NAL+ MY KC V E ++F + +++V
Sbjct: 342 SASAQLRDLSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVV 401
Query: 268 SWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+WNS++ G++EN C +L K M +G PD I+VV L
Sbjct: 402 AWNSMLSGYAENNM-CNDALMLFKQMSL-KGPSPDAISVVHAL 442
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 109/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L A +D+ +G+ +H + ++N L+ MY+ C ++ R+F S+ +
Sbjct: 340 VLSASAQLRDLSLGRSIHGIAVKLGLVEYTVVVNA-LVDMYAKCQAVSEANRIFGSISNK 398
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+++SG+ +N + D L +F ++S PD + + A + D+ G
Sbjct: 399 DVVAWNSMLSGYAENNMCNDALMLFKQMSLKGP-SPDAISVVHALSASVCLGDLLIGKSF 457
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A K + +++VS AL+ +Y KC + ++F+ M +RN V+W ++I G+ G S
Sbjct: 458 HGYAVKHAFLSNIYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDS 517
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
S DL +M+ ++G P+ + ++L
Sbjct: 518 AGSIDLFGEML--KDGVHPNDVAFTSIL 543
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 10/212 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQ--FSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
LL +CG + + +H + TQ T+L++ Y+ G +R VFD
Sbjct: 35 LLPSCGTLPSLRV---LHARLLTHTQGLLLGSLRARTKLLSCYAALGDLASARMVFDGTP 91
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL--KPDNFTFPCVIKACGGIADVGF 218
+ + + ++ + E + + +++ ++ D+F +KAC AD G+
Sbjct: 92 RPDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRPCPEAQDDFVLSLALKACIRSADYGY 151
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G+ +H A K+G D FV N+L+ MY K +E K+FE +P RN+VSW S++ G +
Sbjct: 152 GTRLHCDAVKVG-GADGFVMNSLVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQ 210
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
NGF+ + L KM ++ P T+ TV+
Sbjct: 211 NGFAADGLLLFNKMR--QDNVPPSEYTIATVI 240
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 112/208 (53%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+A G +D+ G+ VH L + + D I + L+ MY C D+++VFD + +R
Sbjct: 210 VLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSR 269
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W AL++G+ ++ + + +F E+ +++ P+ T V+ AC + + G V
Sbjct: 270 NVVTWTALIAGYVQSRCFDKGMLVFEEMLK-SDVAPNEKTLSSVLSACAHVGALHRGRRV 328
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K + + LI +Y KC +EE + +FE + E+N+ +W ++I GF+ +G++
Sbjct: 329 HCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYA 388
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++FDL M+ P+ +T + VL
Sbjct: 389 RDAFDLFYTMLSSHVS--PNEVTFMAVL 414
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 92/151 (60%), Gaps = 3/151 (1%)
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE 189
S+ F+ N+ LI+ YS G + R+FD + +++ W A++ GF +N ++ + FVE
Sbjct: 136 SDPFVRNS-LISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVE 194
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG-DVFVSNALIAMYGKC 248
+ T + + T V+KA G + DV FG VHG+ + G + DVF+ ++L+ MYGKC
Sbjct: 195 MKK-TGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKC 253
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+ ++ K+F+ MP RN+V+W ++I G+ ++
Sbjct: 254 SCYDDAQKVFDEMPSRNVVTWTALIAGYVQS 284
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 26/229 (11%)
Query: 85 SLLQENLHNADLKEATGVLLQA--CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITM 142
+LL LH LK+ +LL + +D+ + + + +A+TQF
Sbjct: 6 TLLDLPLHFLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRY----------- 54
Query: 143 YSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV-ELSSDTELKPDNF 201
+RR+ L+T ++ W++L+ F+ LS + P
Sbjct: 55 ---------ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRH 105
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
TFP ++KA + D H K GL D FV N+LI+ Y + +LF+
Sbjct: 106 TFPPLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGA 164
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++++V+W ++I GF NG + E+ ++M + G + +TVV+VL
Sbjct: 165 EDKDVVTWTAMIDGFVRNGSASEAMVYFVEMK--KTGVAANEMTVVSVL 211
>gi|356541211|ref|XP_003539074.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Glycine max]
Length = 548
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 117/211 (55%), Gaps = 8/211 (3%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
E+ L+ ++ + GK++H + + F+ ++ + L++ Y+ CG +R++FD
Sbjct: 28 ESYAELIDMYARDRALHAGKKLHAHL-VTNGFARFNVVASNLVSFYTCCGQLSHARKLFD 86
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDN-FTFPCVIKACGGIADV 216
+ T N+ +W AL+ + Y L++F E+ + L P+ F P V+KACG + D
Sbjct: 87 KIPTTNVRRWIALIGSCARCGFYDHALAVFSEMQAVQGLTPNYVFVIPSVLKACGHVGDR 146
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G +HG K D FVS++LI MY KCA VE+ K+F+ M ++ V+ N+++ G+
Sbjct: 147 ITGEKIHGFILKCSFELDSFVSSSLIVMYSKCAKVEDARKVFDGMTVKDTVALNAVVAGY 206
Query: 277 SENGFSCESFDLL--IKMMGCEEGFIPDVIT 305
+ G + E+ L+ +K+MG + P+V+T
Sbjct: 207 VQQGAANEALGLVESMKLMGLK----PNVVT 233
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 117/259 (45%), Gaps = 70/259 (27%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACGH D G+++H + F D +++ LI MYS C D+R+VFD + +
Sbjct: 136 VLKACGHVGDRITGEKIHGFI-LKCSFELDSFVSSSLIVMYSKCAKVEDARKVFDGMTVK 194
Query: 163 -----------------------------------NLFQWNALVSGFTK-------NELY 180
N+ WN+L+SGF++ +E++
Sbjct: 195 DTVALNAVVAGYVQQGAANEALGLVESMKLMGLKPNVVTWNSLISGFSQKGDQGRVSEIF 254
Query: 181 ---------------TDVLSIFVELSSDTE------------LKPDNFTFPCVIKACGGI 213
T V+S FV+ + E P + T ++ AC
Sbjct: 255 RLMIADGVEPDVVSWTSVISGFVQNFRNKEAFDTFKQMLSHGFHPTSATISALLPACATA 314
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
A V G +HG A G+ GD++V +AL+ MY KC F+ E LF MPE+N V+WNSII
Sbjct: 315 ARVSVGREIHGYALVTGVEGDIYVRSALVDMYAKCGFISEARNLFSRMPEKNTVTWNSII 374
Query: 274 CGFSENGFSCESFDLLIKM 292
GF+ +G+ E+ +L +M
Sbjct: 375 FGFANHGYCEEAIELFNQM 393
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 80/175 (45%), Gaps = 3/175 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + +G+ +H + T D + + L+ MY+ CGF ++R +F + +
Sbjct: 307 LLPACATAARVSVGREIHGY-ALVTGVEGDIYVRSALVDMYAKCGFISEARNLFSRMPEK 365
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WN+++ GF + + + +F ++ + K D+ TF + AC + D G +
Sbjct: 366 NTVTWNSIIFGFANHGYCEEAIELFNQMEKEGVAKLDHLTFTAALTACSHVGDFELGQRL 425
Query: 223 HG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICG 275
M K + + ++ + G+ + E + + MP E +L W +++
Sbjct: 426 FKIMQEKYSIEPRLEHYACMVDLLGRAGKLHEAYCMIKTMPIEPDLFVWGALLAA 480
>gi|242091425|ref|XP_002441545.1| hypothetical protein SORBIDRAFT_09g029090 [Sorghum bicolor]
gi|241946830|gb|EES19975.1| hypothetical protein SORBIDRAFT_09g029090 [Sorghum bicolor]
Length = 501
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 111/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C KD +G +VH + + + + + L+ MY C ++ F+ L +
Sbjct: 215 VLGHCASMKDFVLGIQVHAQ-ALKKRLELNVYVGSALVDMYGKCDHAHEANHAFEVLPEK 273
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A+++ + +NELY D L +F+++ + ++P+ FT+ V+ +C G+A + G+ +
Sbjct: 274 NVVSWTAVMTAYNQNELYEDALQLFLDMEMEG-VQPNEFTYAVVLNSCAGLAALRTGNTL 332
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
K G + VSN L+ MY K +E+ ++F MP R++VSWN II G++ +G +
Sbjct: 333 GACTMKSGHWDHLLVSNGLLNMYSKSGSIEDAHRVFISMPFRDVVSWNLIITGYAHHGLA 392
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + M+ +P +T V VL
Sbjct: 393 KEAMEAFHSML--SAAVVPSYVTFVGVL 418
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 104/207 (50%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ A + + ++G++ H + ++ N ++ MY C D+ +VF+++ +
Sbjct: 115 VSATANVRSYDMGRQCHGYAVKAGLAEQRYVFNA-VLYMYCQCAHMEDAAKVFENVSGFD 173
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
F +N++++GF L I +++ + E K D ++ V+ C + D G VH
Sbjct: 174 AFAFNSMINGFLDRGLLDGSFGIVRKMTEEVE-KWDYVSYVAVLGHCASMKDFVLGIQVH 232
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
A K L +V+V +AL+ MYGKC E FEV+PE+N+VSW +++ +++N
Sbjct: 233 AQALKKRLELNVYVGSALVDMYGKCDHAHEANHAFEVLPEKNVVSWTAVMTAYNQNELYE 292
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L + M EG P+ T VL
Sbjct: 293 DALQLFLDME--MEGVQPNEFTYAVVL 317
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 8/214 (3%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
+ A +L+ D+ GK +H + + F D +++ LI+ Y+ CG +R+VF
Sbjct: 11 RHAAVAVLRTAAAAGDLSKGKALHARLITAAHF--DVVLHNNLISFYAKCGRVGLARKVF 68
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
D++ RN N L+S + + D L++ + D + + + A +
Sbjct: 69 DAMPFRNAVSGNLLMSAYASLGRHKDSLALLRVVDFDL----NEYVLSAAVSATANVRSY 124
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G HG A K GL +V NA++ MY +CA +E+ K+FE + + ++NS+I GF
Sbjct: 125 DMGRQCHGYAVKAGLAEQRYVFNAVLYMYCQCAHMEDAAKVFENVSGFDAFAFNSMINGF 184
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ G SF ++ KM EE D ++ V VL
Sbjct: 185 LDRGLLDGSFGIVRKMT--EEVEKWDYVSYVAVL 216
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 111/206 (53%), Gaps = 4/206 (1%)
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNL 164
+AC ++GK VH LV T + D + + L+ MY+ CG ++R VFD + RN+
Sbjct: 163 KACAILGRCDVGKSVHCLV-IKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNV 221
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
W+ ++ G+T+ + + + +F E + L ++FT VI+ CG + G +HG
Sbjct: 222 VSWSGMIYGYTQLGEHEEAMRLFKEALLEG-LDVNDFTLSSVIRVCGSATLLELGKQIHG 280
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCE 284
+ K FV ++LI++Y KC +E ++F+ +P +NL WN+++ +++ + E
Sbjct: 281 LCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKE 340
Query: 285 SFDLLIKMMGCEEGFIPDVITVVTVL 310
+FDL KM G P+ IT + VL
Sbjct: 341 AFDLFTKMENA--GMRPNFITFLCVL 364
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI YS PL S +VF+ + ++ W++++S F +NE + F + + L P
Sbjct: 95 LINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQNEEPVLAIQYFCRMIGEN-LCP 153
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D+ FP KAC + G VH + K G DVFV ++L+ MY KC ++E +F
Sbjct: 154 DDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVF 213
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLL 289
+ MP RN+VSW+ +I G+++ G E+ L
Sbjct: 214 DEMPHRNVVSWSGMIYGYTQLGEHEEAMRLF 244
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 96/202 (47%), Gaps = 5/202 (2%)
Query: 82 KALSLLQENL-HNADLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
+A+ L +E L D+ + T +++ CG +E+GK++H L T + + + L
Sbjct: 239 EAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLC-FKTSYDLSGFVGSSL 297
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
I++YS CG + RVFD + +NL WNA++ ++ + +F ++ + ++P+
Sbjct: 298 ISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKM-ENAGMRPN 356
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
TF CV+ AC V G + K + +++ + G+ ++E + + +
Sbjct: 357 FITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIK 416
Query: 260 VMPERNLVS-WNSIICGFSENG 280
MP S W + I G +G
Sbjct: 417 GMPTEPTESVWGAFITGCRIHG 438
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 122/237 (51%), Gaps = 7/237 (2%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
+ K +ALSL + +AT +L A E+ +E K VH + D
Sbjct: 413 QQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLV--DL 470
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
+ L+ MY+ CG + +++VFD + RN+ W ++SG ++ + S+F+++ +
Sbjct: 471 RVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLRE 530
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+ PD T+ ++ AC + + VH A GL+ D+ V NAL+ MY KC V++
Sbjct: 531 G-IVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDD 589
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F+ M ER++ SW +I G +++G ++ DL +KM EGF P+ + V VL
Sbjct: 590 ARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMK--LEGFKPNGYSFVAVL 644
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 113/211 (53%), Gaps = 8/211 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L A +E K VH + + + D + L+ MY+ G D+R VFD + R
Sbjct: 137 ILNANASAGALEWVKEVHSH-AVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVER 195
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG---FG 219
++F W ++ G ++ + S+F+++ L P+ T+ ++ A I G +
Sbjct: 196 DIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCL-PNLTTYLSILNASA-ITSTGALEWV 253
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
VH A K G I D+ V NALI MY KC +++ +F+ M +R+++SWN++I G ++N
Sbjct: 254 KEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQN 313
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+F + +KM +EGF+PD T +++L
Sbjct: 314 GCGHEAFTIFLKMQ--QEGFVPDSTTYLSLL 342
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 104/198 (52%), Gaps = 4/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E K VH+ + F +D + LI MY+ CG D+R VFD + R++ WNA++
Sbjct: 250 LEWVKEVHKH-AGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIG 308
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G +N + +IF+++ + PD+ T+ ++ + VH A ++GL+
Sbjct: 309 GLAQNGCGHEAFTIFLKMQQEG-FVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLV 367
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
D+ V +A + MY +C +++ +F+ + RN+ +WN++I G ++ E+ L ++M
Sbjct: 368 SDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQM 427
Query: 293 MGCEEGFIPDVITVVTVL 310
EGF PD T V +L
Sbjct: 428 R--REGFFPDATTFVNIL 443
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 109/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC ++ GK++H + S F +D + T L+ MY CG D++ +FD + R
Sbjct: 36 ILKACCSPVSLKWGKKIHAHIIQSG-FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVER 94
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W ++ G + F+++ + + P+++T+ ++ A + + V
Sbjct: 95 NVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFI-PNSYTYVSILNANASAGALEWVKEV 153
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A GL D+ V NAL+ MY K +++ +F+ M ER++ SW +I G +++G
Sbjct: 154 HSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRG 213
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F L ++M G +P++ T +++L
Sbjct: 214 QEAFSLFLQME--RGGCLPNLTTYLSIL 239
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 170 LVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM 229
++ G+ + D + ++ ++ + +P+ T+ ++KAC + +G +H +
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGG-QPNEITYLSILKACCSPVSLKWGKKIHAHIIQS 59
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL 289
G DV V AL+ MY KC +++ +F+ M ERN++SW +I G + G E+F
Sbjct: 60 GFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRF 119
Query: 290 IKMMGCEEGFIPDVITVVTVL 310
++M EGFIP+ T V++L
Sbjct: 120 LQMQ--REGFIPNSYTYVSIL 138
>gi|110738388|dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana]
Length = 596
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 112/208 (53%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+A G +D+ G+ VH L + + D I + L+ MY C D+++VFD + +R
Sbjct: 210 VLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSR 269
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W AL++G+ ++ + + +F E+ +++ P+ T V+ AC + + G V
Sbjct: 270 NVVTWTALIAGYVQSRCFDKGMLVFEEMLK-SDVAPNEKTLSSVLSACAHVGALHRGRRV 328
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K + + LI +Y KC +EE + +FE + E+N+ +W ++I GF+ +G++
Sbjct: 329 HCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYA 388
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++FDL M+ P+ +T + VL
Sbjct: 389 RDAFDLFYTMLSSHVS--PNEVTFMAVL 414
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 92/151 (60%), Gaps = 3/151 (1%)
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE 189
S+ F+ N+ LI+ YS G + R+FD + +++ W A++ GF +N ++ + FVE
Sbjct: 136 SDPFVRNS-LISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVE 194
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG-DVFVSNALIAMYGKC 248
+ T + + T V+KA G + DV FG VHG+ + G + DVF+ ++L+ MYGKC
Sbjct: 195 MKK-TGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKC 253
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+ ++ K+F+ MP RN+V+W ++I G+ ++
Sbjct: 254 SCYDDAQKVFDEMPSRNVVTWTALIAGYVQS 284
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 26/229 (11%)
Query: 85 SLLQENLHNADLKEATGVLLQA--CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITM 142
+LL LH LK+ +LL + +D+ + + + +A+TQF
Sbjct: 6 TLLDLPLHFLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRY----------- 54
Query: 143 YSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV-ELSSDTELKPDNF 201
+RR+ L+T ++ W++L+ F+ LS + P
Sbjct: 55 ---------ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRH 105
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
TFP ++KA + D H K GL D FV N+LI+ Y + +LF+
Sbjct: 106 TFPPLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGA 164
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++++V+W ++I GF NG + E+ ++M + G + +TVV+VL
Sbjct: 165 EDKDVVTWTAMIDGFVRNGSASEAMVYFVEMK--KTGVAANEMTVVSVL 211
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 102/179 (56%), Gaps = 2/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I+ T +++ Y G + F ++ RNL WNA+V+G+ KN D L +F +
Sbjct: 165 DAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMV 224
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
D ++P+ T V+ C ++ +GFG VH K+ L + V +L++MY KC +
Sbjct: 225 EDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDL 284
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ KLF+ M +++V+WN++I G++++G ++ L KM +EG +PD IT++ VL
Sbjct: 285 DDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMK--DEGVVPDWITLLAVL 341
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 89/180 (49%), Gaps = 11/180 (6%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + L++ + CG + RVF ++ R++ WN +VSG +KN + ++F +
Sbjct: 71 DAVSYNTLLSCHFACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMP 130
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ + ++ ++ A D+G + A + D + A+++ Y V
Sbjct: 131 ARNAV-----SWNAMVAARASSGDMGAAENLFRNAPEK---TDAILWTAMVSGYMDTGNV 182
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI-PDVITVVTVL 310
++ ++ F MP RNLVSWN+++ G+ +N + ++ + M+ E+ + P+ T+ +VL
Sbjct: 183 QKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMV--EDAIVQPNPSTLSSVL 240
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 18/135 (13%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNE---LYTDVLSIFVELSSDTELKPDNFTFPCVIK 208
+ F S + + +N L++G+ K D +F D+ PD ++ ++
Sbjct: 26 AEEAFASTQLKTTTTYNCLLAGYAKASGPGRLADARRLF-----DSIPHPDAVSYNTLLS 80
Query: 209 ---ACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
ACG I G + + M + DV N +++ K +EE +F MP RN
Sbjct: 81 CHFACGDI------DGAWRVFSTMP-VRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARN 133
Query: 266 LVSWNSIICGFSENG 280
VSWN+++ + +G
Sbjct: 134 AVSWNAMVAARASSG 148
>gi|449523774|ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14850-like [Cucumis sativus]
Length = 606
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 112/208 (53%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L AC + + G ++H + S + + ++ LI Y CG S VFD + R
Sbjct: 215 FLNACSDKLGLGPGCQLHGFIIRSG-YGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGER 273
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N W++L++ + +N +F+ + +++P +F V+ AC G++++ FG V
Sbjct: 274 NSVSWSSLIAAYVQNNEEEKASCLFLRARKE-DIEPTDFMVSSVLCACAGLSEIEFGRSV 332
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+A K + ++FV++AL+ MYGKC ++ + F MPERNLVSWN+++ G++ G +
Sbjct: 333 QALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHA 392
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ LL +M G +P ++++ L
Sbjct: 393 NKAVALLEEMTSA-AGIVPSYVSLICAL 419
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 100/196 (51%), Gaps = 3/196 (1%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
+G+ H + + + + L+ MY+ ++ + + R++ W AL++G
Sbjct: 24 LGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGS 83
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
+N + L F ++ SD ++P++FTFPCV+KA G+ G +H +A K GLI D
Sbjct: 84 VQNGCFVSALLHFSDMLSDC-VRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLIND 142
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
VFV ++ MY K F+ + K+F+ MP RNL +WN+ I +G +S I+++
Sbjct: 143 VFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELL- 201
Query: 295 CEEGFIPDVITVVTVL 310
G PD IT L
Sbjct: 202 -RVGGKPDSITFCXFL 216
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 92/184 (50%), Gaps = 10/184 (5%)
Query: 96 LKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV 155
LK +TG+ + GK++H L + ND + + MYS GF D+ +V
Sbjct: 115 LKASTGLRMDT--------TGKQLHAL-AVKEGLINDVFVGCSVFDMYSKLGFLNDAYKV 165
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
FD + RNL WNA +S + D + F+EL KPD+ TF + AC
Sbjct: 166 FDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLR-VGGKPDSITFCXFLNACSDKLG 224
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
+G G +HG + G +V VSN LI YGKC VE +F+ M ERN VSW+S+I
Sbjct: 225 LGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAA 284
Query: 276 FSEN 279
+ +N
Sbjct: 285 YVQN 288
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 5/201 (2%)
Query: 75 EESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFI 134
EE K+ L +E++ D ++ +L AC +IE G+ V L + N F+
Sbjct: 290 EEEKASCLFLRARKEDIEPTDFMVSS--VLCACAGLSEIEFGRSVQALAVKACVEQNIFV 347
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ L+ MY CG ++ + F+++ RNL WNAL+ G+ +++ E++S
Sbjct: 348 ASA-LVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAA 406
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+ P + C + AC D+ G + M + G+ L+ + G+ VE
Sbjct: 407 GIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVEC 466
Query: 254 MVKLFEVMPERNLVS-WNSII 273
+ MP +S W +++
Sbjct: 467 AYDFIKRMPFPPTISIWGALL 487
>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Brachypodium distachyon]
Length = 757
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 107/212 (50%), Gaps = 3/212 (1%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A G ++AC DI +G++VH S S D I+ L+TMYS G D +F
Sbjct: 144 ALGSTVRACAELGDIGVGRQVHAQAMKSENGS-DLIVQNALVTMYSKSGLVADGFLLFGR 202
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
++ ++ W ++++GF + + L IF E+ ++ P+ F F V ACG + + +
Sbjct: 203 MREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEY 262
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G +H ++ K L + + +L MY +C +E ++F + +LVSWNSII S
Sbjct: 263 GEQIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSV 322
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ LL +M G G PD ITV +L
Sbjct: 323 EGLLSEAMVLLSEMRG--SGLRPDGITVRGLL 352
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 88/175 (50%), Gaps = 3/175 (1%)
Query: 120 HELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNEL 179
H L S + ++N LITMY C P +R VFD + +N W ++++ +N
Sbjct: 63 HLLASPDPNLVRNTVLNNHLITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRR 122
Query: 180 YTDVLSIFVE-LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVS 238
TD L +F L S T PD F ++AC + D+G G VH A K D+ V
Sbjct: 123 STDALGLFSSMLRSGT--APDQFALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIVQ 180
Query: 239 NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
NAL+ MY K V + LF M E++ +SW SII GF++ G E+ + +M+
Sbjct: 181 NALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEALQIFREMV 235
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 102/198 (51%), Gaps = 3/198 (1%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
E ++L ++ E +H+ + + G + ACG +E G+++H L S + ++
Sbjct: 224 EMEALQIFREMVAEGMHHPN-EFHFGSVFSACGVLGSLEYGEQIHSL-SVKYRLDHNSYA 281
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
L MY+ C ++RVF + +L WN++++ + L ++ + + E+ +
Sbjct: 282 GCSLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRG-SG 340
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
L+PD T ++ AC G + G +H K+GL GDV V N+L++MY +C +
Sbjct: 341 LRPDGITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAM 400
Query: 256 KLFEVMPERNLVSWNSII 273
+F +R++V+WNSI+
Sbjct: 401 DVFHETRDRDVVTWNSIL 418
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 115/244 (47%), Gaps = 7/244 (2%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSAST 127
I C L++A+ LL E + + V LL AC I+ G+ +H +
Sbjct: 316 IINACSVEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYL-VKL 374
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
D + L++MY+ C + VF + R++ WN++++ +++ V +F
Sbjct: 375 GLDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQHLEVVFKLF 434
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
L + D + V+ A + VH K+GL+ D +SN LI Y K
Sbjct: 435 -NLLQRSLPSLDRISLNNVLSASAELGYFEMVKQVHTCTFKVGLVNDTMLSNGLIDTYAK 493
Query: 248 CAFVEEMVKLFEVM-PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
C +++ VKLFE+M ++ SW+S+I G++++G+ ++ DL +M G P+ +T
Sbjct: 494 CGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNL--GVRPNHVTF 551
Query: 307 VTVL 310
V VL
Sbjct: 552 VGVL 555
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C ++I++G+++H L S T F +D ++ LI MYS G+ +RRV + LK +
Sbjct: 351 ILRTCTCTREIDLGEQIHSL-SVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK 409
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W ++++G+ ++E D L+ F E+ + PDN I C GI + G +
Sbjct: 410 DVVSWTSMIAGYVQHECCKDALAAFKEMQK-CGIWPDNIGLASAISGCAGINAMRQGLQI 468
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G GDV + NAL+ +Y +C + E FE M ++ ++ N ++ GF+++G
Sbjct: 469 HARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLH 528
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + ++M + G +V T V+ L
Sbjct: 529 EEALKVFMRMD--QSGVKHNVFTFVSAL 554
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ C + G ++H + S +S D I L+ +Y+ CG ++ F+ ++ ++
Sbjct: 453 ISGCAGINAMRQGLQIHARIYVSG-YSGDVSIWNALVNLYARCGRIREAFSSFEEMELKD 511
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
N LVSGF ++ L+ + L +F+ + + +K + FTF + A +A++ G +H
Sbjct: 512 GITGNGLVSGFAQSGLHEEALKVFMRMD-QSGVKHNVFTFVSALSASANLAEIKQGKQIH 570
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
K G + V NALI++YGKC E+ F M ERN VSWN+II S++G
Sbjct: 571 ARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGL 630
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL +M +EG P+ +T + VL
Sbjct: 631 EALDLFDQMK--KEGIKPNDVTFIGVL 655
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 110/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC D++ G ++H + + S+D+I+ L+ +Y CG + +F+S
Sbjct: 250 LLAACASLGDLQKGTQLHSYLFKAG-ISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT 308
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN ++ F + +F ++ + ++P+ FT+PC+++ C ++ G +
Sbjct: 309 NVVLWNLMLVAFGQINDLAKSFELFCQMQA-AGIRPNQFTYPCILRTCTCTREIDLGEQI 367
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H ++ K G D++VS LI MY K ++E+ ++ E++ E+++VSW S+I G+ ++
Sbjct: 368 HSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECC 427
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +M C G PD I + + +
Sbjct: 428 KDALAAFKEMQKC--GIWPDNIGLASAI 453
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 105/209 (50%), Gaps = 7/209 (3%)
Query: 104 LQAC-GHEKDIEIGKRVHELVSASTQFSNDF-IINTRLITMYSLCGFPLDSRRVFDSLKT 161
L+AC G+ + ++ +H A T+ + I+ LI +YS G L +RRVF+ L
Sbjct: 48 LRACRGNGRRWQVVPEIH--AKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSA 105
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R+ W A++SG+ +N L + L ++ ++ + P + V+ +C G
Sbjct: 106 RDNVSWVAMLSGYAQNGLGEEALGLYRQMHR-AGVVPTPYVLSSVLSSCTKAELFAQGRL 164
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K G ++FV NA+I +Y +C ++F MP R+ V++N++I G ++ G
Sbjct: 165 IHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGH 224
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ +M G PD +T+ ++L
Sbjct: 225 GEHALEIFEEMQF--SGLSPDCVTISSLL 251
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 8/232 (3%)
Query: 82 KALSLLQENLHNADLKEATGVL---LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
+AL L ++ +H A + VL L +C + G+ +H F ++ +
Sbjct: 126 EALGLYRQ-MHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQ-GYKHGFCSEIFVGNA 183
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+IT+Y CG + RVF + R+ +N L+SG + L IF E+ + L P
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF-SGLSP 242
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D T ++ AC + D+ G+ +H K G+ D + +L+ +Y KC VE + +F
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
N+V WN ++ F + +SF+L +M G P+ T +L
Sbjct: 303 NSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAA--GIRPNQFTYPCIL 352
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 6/142 (4%)
Query: 171 VSGFTKNELYTDVLSIFVELSSD-TELKPDNFTFPCVIKACGGIADV-GFGSGVHGMAAK 228
++GF +E VLS+F + + L P F C ++AC G +H A
Sbjct: 13 LAGFLAHEDPAKVLSLFADKARQHGGLGP--LDFACALRACRGNGRRWQVVPEIHAKAVT 70
Query: 229 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
GL V N LI +Y K V ++FE + R+ VSW +++ G+++NG E+ L
Sbjct: 71 RGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGL 130
Query: 289 LIKMMGCEEGFIPDVITVVTVL 310
+M G +P + +VL
Sbjct: 131 YRQMH--RAGVVPTPYVLSSVL 150
>gi|147797709|emb|CAN61058.1| hypothetical protein VITISV_011618 [Vitis vinifera]
Length = 529
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 111/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++ACG I G+++H + F + II T L++MY L +++FD + R
Sbjct: 85 VIKACGLRPVILEGEQIHGQI-FKLGFEFEVIIQTALLSMYGLFDEDCGLQQIFDEMPQR 143
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WNAL++ + V + ++ S + +KP+ T ++ C + + G V
Sbjct: 144 DLVMWNALIAAYAHGNCPYKVREVSYDMVS-SNVKPNGVTAVSILSVCSSLRALREGKAV 202
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K + DVFV NALI +Y KC + + V++F++MP RN+VSW S+I G+S+N
Sbjct: 203 HGYVTKNLIEXDVFVHNALIDVYSKCGSIRDAVQVFQLMPMRNVVSWTSLINGYSDNNCP 262
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +M E PD ITV+ V+
Sbjct: 263 NEALGFFKQMEA--ENIRPDEITVLGVV 288
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C + + GK VH V+ + D ++ LI +YS CG D+ +VF + R
Sbjct: 186 ILSVCSSLRALREGKAVHGYVTKNL-IEXDVFVHNALIDVYSKCGSIRDAVQVFQLMPMR 244
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W +L++G++ N + L F ++ ++ ++PD T V+ C + G +
Sbjct: 245 NVVSWTSLINGYSDNNCPNEALGFFKQMEAEN-IRPDEITVLGVVCMCSKLRSFELGEWI 303
Query: 223 HGMAAKMGLIGDV-FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
K GL+ + ++N L+ M+ KC ++ ++F+ M E+ +VSW +I G + G
Sbjct: 304 SQYVVKTGLVKESPAIANVLMDMHAKCGNIKRACQIFDGMEEKTIVSWTIMIQGLAMYGH 363
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +M EGF PD + +++L
Sbjct: 364 GLSALVRFCQMQ--REGFKPDSLVFLSLL 390
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 84/161 (52%), Gaps = 7/161 (4%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+RR+ D + + + WN ++ G+ + + + I+ + LK D +T VIKACG
Sbjct: 32 ARRIADQIDGLDTYTWNTIIRGYLEGNDPEEAILIYNHVRKKG-LKVDTYTLVFVIKACG 90
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE--MVKLFEVMPERNLVSW 269
+ G +HG K+G +V + AL++MYG F E+ + ++F+ MP+R+LV W
Sbjct: 91 LRPVILEGEQIHGQIFKLGFEFEVIIQTALLSMYG--LFDEDCGLQQIFDEMPQRDLVMW 148
Query: 270 NSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
N++I ++ + ++ M+ P+ +T V++L
Sbjct: 149 NALIAAYAHGNCPYKVREVSYDMV--SSNVKPNGVTAVSIL 187
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 124/239 (51%), Gaps = 8/239 (3%)
Query: 76 ESKSLNKALSLLQENLH-NADLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
E+ + +AL L +E + N E+T V +L AC IE+G++VH + SN
Sbjct: 212 ETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLK 271
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
I+N LI +Y CG + +F+ L +++ WN L+ G+T LY + L +F E+
Sbjct: 272 IVNA-LIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 330
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM--GLIGDVFVSNALIAMYGKCAFV 251
E P+ T ++ AC + + G +H K G+ + +LI MY KC +
Sbjct: 331 GE-SPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDI 389
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E ++F+ M R+L SWN++I GF+ +G + +FD+ +M ++G PD IT V +L
Sbjct: 390 EAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMR--KDGIEPDDITFVGLL 446
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 98/180 (54%), Gaps = 3/180 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + T LI Y+ G+ ++++FD + +++ WNAL+SG+ + Y + L +F E+
Sbjct: 168 DVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMM 227
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
T +KPD T V+ AC A + G VH G ++ + NALI +Y KC V
Sbjct: 228 K-TNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEV 286
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E LFE + ++++SWN++I G++ E+ L +M+ G P+ +T++++LP
Sbjct: 287 ETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEML--RSGESPNEVTMLSILP 344
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 89/187 (47%), Gaps = 34/187 (18%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VFDS++ NL WN + G + L ++V + S L P+++TFP ++KAC
Sbjct: 59 VFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMIS-LGLVPNSYTFPFLLKACAKSK 117
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK--------------------------- 247
G +HG K+G D++V +LIAMY K
Sbjct: 118 AFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIK 177
Query: 248 ----CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
++ K+F+ +P +++VSWN++I G++E G E+ +L +MM + PD
Sbjct: 178 GYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMM--KTNVKPDE 235
Query: 304 ITVVTVL 310
T+VTVL
Sbjct: 236 STMVTVL 242
>gi|449433319|ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Cucumis sativus]
Length = 606
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 112/209 (53%), Gaps = 3/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
L AC + + G ++H + S + + ++ LI Y CG S VFD +
Sbjct: 214 AFLNACSDKLGLGPGCQLHGFIIRSG-YGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGE 272
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
RN W++L++ + +N +F+ + +++P +F V+ AC G++++ FG
Sbjct: 273 RNSVSWSSLIAAYVQNNEEEKASCLFLRARKE-DIEPTDFMVSSVLCACAGLSEIEFGRS 331
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
V +A K + ++FV++AL+ MYGKC ++ + F MPERNLVSWN+++ G++ G
Sbjct: 332 VQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGH 391
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ LL +M G +P ++++ L
Sbjct: 392 ANKAVALLEEMTSA-AGIVPSYVSLICAL 419
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 92/184 (50%), Gaps = 10/184 (5%)
Query: 96 LKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV 155
LK +TG+ + GK++H L + ND + + MYS GF D+ +V
Sbjct: 115 LKASTGLRMDT--------TGKQLHAL-AVKEGLINDVFVGCSVFDMYSKLGFLNDAYKV 165
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
FD + RNL WNA +S + D + F+EL KPD+ TF + AC
Sbjct: 166 FDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLR-VGGKPDSITFCAFLNACSDKLG 224
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
+G G +HG + G +V VSN LI YGKC VE +F+ M ERN VSW+S+I
Sbjct: 225 LGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAA 284
Query: 276 FSEN 279
+ +N
Sbjct: 285 YVQN 288
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 100/196 (51%), Gaps = 3/196 (1%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
+G+ H + + + + L+ MY+ ++ + + R++ W AL++G
Sbjct: 24 LGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGS 83
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
+N + L F ++ SD ++P++FTFPCV+KA G+ G +H +A K GLI D
Sbjct: 84 VQNGCFVSALLHFSDMLSDC-VRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLIND 142
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
VFV ++ MY K F+ + K+F+ MP RNL +WN+ I +G +S I+++
Sbjct: 143 VFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELL- 201
Query: 295 CEEGFIPDVITVVTVL 310
G PD IT L
Sbjct: 202 -RVGGKPDSITFCAFL 216
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 5/201 (2%)
Query: 75 EESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFI 134
EE K+ L +E++ D ++ +L AC +IE G+ V L + N F+
Sbjct: 290 EEEKASCLFLRARKEDIEPTDFMVSS--VLCACAGLSEIEFGRSVQALAVKACVEQNIFV 347
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ L+ MY CG ++ + F+++ RNL WNAL+ G+ +++ E++S
Sbjct: 348 ASA-LVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAA 406
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+ P + C + AC D+ G + M + G+ L+ + G+ VE
Sbjct: 407 GIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVEC 466
Query: 254 MVKLFEVMPERNLVS-WNSII 273
+ MP +S W +++
Sbjct: 467 AYDFIKRMPFPPTISIWGALL 487
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 114/215 (53%), Gaps = 4/215 (1%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
K V+L ACGH + E+GK + V F ++ + LI MY CG +R +F
Sbjct: 263 KSTMVVVLSACGHTRSGELGKWIGSWVR-DNGFGSNLQLTNALIDMYCKCGETDIARELF 321
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
D ++ +++ WN ++ G++ LY + L++F E+ + +KP++ TF ++ AC + +
Sbjct: 322 DGIEEKDVISWNTMIGGYSYLSLYEEALALF-EVMLRSNVKPNDVTFLGILHACACLGAL 380
Query: 217 GFGSGVHGMAAK-MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
G VH K + + + +LI MY KC +E ++F M RNL SWN+++ G
Sbjct: 381 DLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSG 440
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ +G + + L +M+ + F PD IT V VL
Sbjct: 441 FAMHGHAERALALFSEMVN-KGLFRPDDITFVGVL 474
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 92/179 (51%), Gaps = 3/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + T LIT Y G D+RR+FD + +++ WNA++SG+ ++ + + + F E+
Sbjct: 196 DAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQ 255
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ + P+ T V+ ACG G + G ++ ++NALI MY KC
Sbjct: 256 -EANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGET 314
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +LF+ + E++++SWN++I G+S E+ L M+ P+ +T + +L
Sbjct: 315 DIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVML--RSNVKPNDVTFLGIL 371
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 97/185 (52%), Gaps = 12/185 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +++GK VH + + + S++ + T LI MY+ CG + RVF S+ +R
Sbjct: 370 ILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSR 429
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVG--- 217
NL WNA++SGF + L++F E+ + +PD+ TF V+ AC G+ D+G
Sbjct: 430 NLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQY 489
Query: 218 FGSGV--HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
F S + +G++ K+ G + L+A K E ++K E+ P+ + W S++
Sbjct: 490 FRSMIQDYGISPKLQHYGCMI---DLLARAEKFEEAEILMKNMEMEPDGAI--WGSLLSA 544
Query: 276 FSENG 280
+G
Sbjct: 545 CKAHG 549
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 109/249 (43%), Gaps = 53/249 (21%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITM----------YSLCGFPLDS 152
LL+ C K+I K++H L+ T +N + ++LI Y+L F +
Sbjct: 34 LLEKC---KNINTFKQIHSLI-IKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQ 89
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
+ N+F WN+L+ G++ + L +F + ++P++ TFP + K+C
Sbjct: 90 QH-----HKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLY-YGVQPNSHTFPFLFKSCTK 143
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY---GKCAF------------------- 250
G +H A K+ L + V ++I MY G+ F
Sbjct: 144 AKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTAL 203
Query: 251 ---------VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIP 301
+++ +LF+ +P +++VSWN++I G+ ++G E+ +M E +P
Sbjct: 204 ITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQ--EANVLP 261
Query: 302 DVITVVTVL 310
+ T+V VL
Sbjct: 262 NKSTMVVVL 270
>gi|302798306|ref|XP_002980913.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
gi|300151452|gb|EFJ18098.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
Length = 809
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 113/215 (52%), Gaps = 11/215 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSND-------FIINTRLITMYSLCGFPLDSRRV 155
LL+ CG D+ GKR+H + S +D F+ N L+ MY CG +++R
Sbjct: 20 LLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNC-LVQMYGKCGRTDEAQRA 78
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
FDS+ +N+F W +++ + L+ L F ++ ++PD F + CG +
Sbjct: 79 FDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIK-AGVEPDRLVFLAALNVCGILKR 137
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
+ G+G+H L D+ + NAL++MYGKC ++ +LF+ + +N++SW ++
Sbjct: 138 LEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKNVISWTILVSV 197
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ENG E++ LL M EG PD + ++T+L
Sbjct: 198 FAENGRRRETWGLLRSM--AVEGIKPDKVLLLTLL 230
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 6/207 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC +D G+ +H L+ S F + + L+TMY CG LDS ++F + ++
Sbjct: 335 LGACSSLQD---GRALHLLIDESG-FDREVSVANALVTMYGRCGSLLDSAKLFSEMAEKD 390
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L WN+ ++ + + + + ++ + L+P + T + ACGG+AD VH
Sbjct: 391 LASWNSAIAAHAYHGRSDECIKLLDQMRGEGGLEPSSVTLVTAMSACGGLADPSSSKRVH 450
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
A ++GL + V+N L+ MYGK V+ +F+ RN+ +WN++ + + G +
Sbjct: 451 ERARELGLESETCVANGLVDMYGKAGDVDTARYIFDRALRRNVTTWNAMAGAYRQCGVTR 510
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
L+ M +G+ PD +T V++L
Sbjct: 511 GVLWLVRTMQ--RDGYRPDSVTFVSLL 535
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 8/211 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L CG K +E G +H + +D I L++MY CG ++++FD L+ +N
Sbjct: 129 LNVCGILKRLEDGAGIHRQIQ-DKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKN 187
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV- 222
+ W LVS F +N + + ++ + +KPD ++ C + S +
Sbjct: 188 VISWTILVSVFAENGRRRETWGLLRSMAVEG-IKPDKVLLLTLLNVCSSRGVLDEDSWMA 246
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN---LVSWNSIICGFSEN 279
H GL + V+ AL++M+ +C V++ ++FE + + + + WN++I ++
Sbjct: 247 HDYIVGSGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHR 306
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G S E+ LL + +G P+ IT ++ L
Sbjct: 307 GCSKEALFLLDSLQ--LQGVKPNCITFISSL 335
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ ACG D KRVHE S + N L+ MY G +R +FD RN
Sbjct: 434 MSACGGLADPSSSKRVHERARELGLESETCVANG-LVDMYGKAGDVDTARYIFDRALRRN 492
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+ WNA+ + + + VL + + D +PD+ TF ++ CG
Sbjct: 493 VTTWNAMAGAYRQCGVTRGVLWLVRTMQRDG-YRPDSVTFVSLLSVCG 539
>gi|212722054|ref|NP_001132129.1| uncharacterized protein LOC100193546 [Zea mays]
gi|194693506|gb|ACF80837.1| unknown [Zea mays]
gi|413926460|gb|AFW66392.1| hypothetical protein ZEAMMB73_680096 [Zea mays]
Length = 473
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 95/176 (53%), Gaps = 3/176 (1%)
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL-SSDT 194
T L+ Y CG + RVF+ + +++ W ++VSG+ + +Y + +F E+ +D
Sbjct: 155 QTALLNAYLKCGSVATACRVFEEMPVKDVVAWTSMVSGYVDSRMYLKAVEVFNEMRGADD 214
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+ P+ T + AC G+ + G+H K GL ++ V NAL+ MYGKC +E
Sbjct: 215 LVWPNEATVVSLATACAGLGSLEHAKGLHSYVEKAGLEDELIVRNALVDMYGKCGCIESA 274
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+LF +M E++L SW ++I G S +G E+ L M CEEG +PD T + VL
Sbjct: 275 HRLFCLMREKDLHSWTTMISGLSSHGRGEEAVGLFFSM--CEEGVLPDSTTFIVVL 328
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
Query: 184 LSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIA 243
L +F E+ S + D +T P +I AC + +HG ++G VF AL+
Sbjct: 103 LRLFDEMRSRG-VPTDPYTLPLLISACS-CSGFTLCQSLHGQGFRLGYNCHVFTQTALLN 160
Query: 244 MYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
Y KC V ++FE MP +++V+W S++ G+ ++ ++ ++ +M G ++ P+
Sbjct: 161 AYLKCGSVATACRVFEEMPVKDVVAWTSMVSGYVDSRMYLKAVEVFNEMRGADDLVWPNE 220
Query: 304 ITVVTV 309
TVV++
Sbjct: 221 ATVVSL 226
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 76 ESKSLNKALSLLQENLHNADL---KEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSN 131
+S+ KA+ + E DL EAT V L AC +E K +H V + +
Sbjct: 195 DSRMYLKAVEVFNEMRGADDLVWPNEATVVSLATACAGLGSLEHAKGLHSYVEKA-GLED 253
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ I+ L+ MY CG + R+F ++ ++L W ++SG + + + + +F +
Sbjct: 254 ELIVRNALVDMYGKCGCIESAHRLFCLMREKDLHSWTTMISGLSSHGRGEEAVGLFFSMC 313
Query: 192 SDTELKPDNFTFPCVIKAC--GGIADVGFGSGVH---GMAAKMGLIGDVFVSNALIAMYG 246
+ L PD+ TF V+ AC G+ D G+H M ++ + D ++ ++
Sbjct: 314 EEGVL-PDSTTFIVVLSACSHAGLVD----EGIHIFNSMESEHNVPRDTKHYGCMVDLFS 368
Query: 247 KCAFVEEMVKLFEVMP-ERNL 266
+ V + +MP E NL
Sbjct: 369 RAGLVRRAYEFISMMPFEPNL 389
>gi|302820681|ref|XP_002992007.1| hypothetical protein SELMODRAFT_134551 [Selaginella moellendorffii]
gi|300140249|gb|EFJ06975.1| hypothetical protein SELMODRAFT_134551 [Selaginella moellendorffii]
Length = 947
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 117/213 (54%), Gaps = 7/213 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN--TRLITMYSLCGFPLDSRRVFDSLK 160
+L ACG + + ++H V + + + N T L+ MY+ C D+R+VF +
Sbjct: 437 VLDACGDLRASKQSSQIHARVLEAGLERDVVVANALTALLNMYARCHSLEDARKVFAGMC 496
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSD--TELKPDNFTFPCVIKACGGIADVGF 218
++ WN+L++ + ++ + L IF E+ + +KP++ TF I AC D+
Sbjct: 497 RKDAICWNSLLAAYAQSGSGKEALQIFREMDLEGCKSMKPNDVTFVSTIDACANSMDLAS 556
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF-EVMPERNLVSWNSIICGFS 277
G H AA++G+ +V V+N+LI MYGKC +EE + +F ++ R+LVSWN++I F+
Sbjct: 557 GIVFHRRAAEVGMDSNVVVANSLIKMYGKCKRLEEAMSVFNRILGIRDLVSWNALISAFA 616
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+NG + + M+ EG PD IT ++VL
Sbjct: 617 QNGDGRRALETYWAMI--REGVRPDRITFISVL 647
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC I G+ +H S S D ++ T L+ MY CG +++ F L+ R
Sbjct: 646 VLDACATLGSIAEGREIHRQASEGGFESVDAVLGT-LVNMYGRCGNAMEAELAFGKLQQR 704
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA+ + T+ L I + ++ +KPDN TF ++ C + G
Sbjct: 705 DAIAWNAVAAAITQTGDQRRALGILRGMDNEG-VKPDNVTFITLLDTCADCNALVEGKIF 763
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A ++G D+ + NAL+ MYGKC + E ++F MP RN VSWN++I +++NG
Sbjct: 764 HARAMELGFGFDIILGNALLNMYGKCGSLREANRVFAAMPVRNSVSWNTLIVAYAQNGHV 823
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L M EG +P+ ++ +++
Sbjct: 824 KLAIGLFRDMD--LEGIVPNQVSFLSIF 849
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ A G K G+ H + +D +I L+++Y C +R VFD + +
Sbjct: 133 IISALGCCKSFSRGQWFHSRIKQEGFLPDDVMIQNALVSLYGRCCEVDQARSVFDEICNK 192
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L W A++S F +N + F + +D +KP TF +++A D +
Sbjct: 193 DLVSWTAMISAFVQNGHPDRAMVCFWSMQADG-VKPCRVTFITILEAVMETRDARVCEEI 251
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + GL D + N L+ YGKC +E+M + FE + E+N+VSW+ I FS+NG+
Sbjct: 252 HLQIIETGLEKDDKLLNLLVRSYGKCGDMEKMKESFEKLDEKNVVSWSGTIAAFSQNGYF 311
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L KM EG + +T V++L
Sbjct: 312 WEAIRQLQKMD--LEGVQANEVTFVSIL 337
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 111/233 (47%), Gaps = 11/233 (4%)
Query: 80 LNKALSLLQENLHNADLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
L +A+ L++ H D +T ++L C +E GKR+H N F+ N
Sbjct: 13 LEQAVEDLEQ--HQRDANPSTYALMLDWCVRLGALEAGKRIHRHSVECGMGKNRFVENL- 69
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI MY CG ++R++ D ++ N+F W +++ + +N D L F ++ EL+
Sbjct: 70 LINMYGKCGALEEARKILDRMEDSNVFSWTIMLAAYAQNGHLDDALECFWKM----ELEG 125
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI-GDVFVSNALIAMYGKCAFVEEMVKL 257
+I A G G H + G + DV + NAL+++YG+C V++ +
Sbjct: 126 VRANRVTIISALGCCKSFSRGQWFHSRIKQEGFLPDDVMIQNALVSLYGRCCEVDQARSV 185
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ + ++LVSW ++I F +NG + M +G P +T +T+L
Sbjct: 186 FDEICNKDLVSWTAMISAFVQNGHPDRAMVCFWSMQA--DGVKPCRVTFITIL 236
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 119/235 (50%), Gaps = 9/235 (3%)
Query: 82 KALSLLQE-NLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLI 140
+A+ LQ+ +L E T V + ++IE G+ + + S SN + N+ L+
Sbjct: 313 EAIRQLQKMDLEGVQANEVTFVSILDASVWEEIEEGEFLRSRIIESGYGSNVAVCNS-LV 371
Query: 141 TMYSLCGFPLDSRRVFDSLKTR-NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
MY C +++ VF S++ R N W++LV+ + +N T+ + +F + + LKPD
Sbjct: 372 NMYGKCHSLGNAKEVFWSMEERKNEISWSSLVAAYAQNNQATEAMKLFQHMDLEG-LKPD 430
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIA---MYGKCAFVEEMVK 256
T V+ ACG + S +H + GL DV V+NAL A MY +C +E+ K
Sbjct: 431 RVTLISVLDACGDLRASKQSSQIHARVLEAGLERDVVVANALTALLNMYARCHSLEDARK 490
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM--MGCEEGFIPDVITVVTV 309
+F M ++ + WNS++ ++++G E+ + +M GC+ DV V T+
Sbjct: 491 VFAGMCRKDAICWNSLLAAYAQSGSGKEALQIFREMDLEGCKSMKPNDVTFVSTI 545
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 5/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS-LKTR 162
+ AC + D+ G H + SN + N+ LI MY C ++ VF+ L R
Sbjct: 545 IDACANSMDLASGIVFHRRAAEVGMDSNVVVANS-LIKMYGKCKRLEEAMSVFNRILGIR 603
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WNAL+S F +N L + + + ++PD TF V+ AC + + G +
Sbjct: 604 DLVSWNALISAFAQNGDGRRALETYWAMIREG-VRPDRITFISVLDACATLGSIAEGREI 662
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A++ G V L+ MYG+C E F + +R+ ++WN++ ++ G
Sbjct: 663 HRQASEGGFESVDAVLGTLVNMYGRCGNAMEAELAFGKLQQRDAIAWNAVAAAITQTGDQ 722
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L M EG PD +T +T+L
Sbjct: 723 RRALGILRGMD--NEGVKPDNVTFITLL 748
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 113/208 (54%), Gaps = 6/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC D+E GK VH+LV + +D + LI+MYS C + +F +L+ +
Sbjct: 239 LHACADLGDLERGKFVHKLVD-QLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKT 297
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L WNA++ G+ +N + L+ F E+ S +KPD+FT VI A ++ +H
Sbjct: 298 LVSWNAMILGYAQNGCVNEALNAFCEMQS-RNIKPDSFTMVSVIPALAELSIPRQAKWIH 356
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G+ + L +VFV AL+ MY KC + KLF++M R++++WN++I G+ +G
Sbjct: 357 GLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGK 416
Query: 284 ESFDLLIKMMGCEEGFI-PDVITVVTVL 310
S +L +M ++G I P+ IT + L
Sbjct: 417 TSVELFKEM---KKGTIKPNDITFLCAL 441
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 110/209 (52%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L A + + IG VH V F + ++T L+ MYS CG +R +FD + R
Sbjct: 137 ILPAVADTRLLRIGMAVHGYV-LRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHR 195
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN+++ G+ ++ + IF ++ D ++P N T + AC + D+ G V
Sbjct: 196 TVVSWNSMIDGYVQSGDAEGAMLIFQKML-DEGVQPTNVTVMGALHACADLGDLERGKFV 254
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + ++ L DV V N+LI+MY KC V+ +F+ + + LVSWN++I G+++NG
Sbjct: 255 HKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCV 314
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ + +M PD T+V+V+P
Sbjct: 315 NEALNAFCEMQ--SRNIKPDSFTMVSVIP 341
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 119/237 (50%), Gaps = 6/237 (2%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATG--VLLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
+S SL+ ALS H++ LL+ CG D++ GK +H V ++ FS +
Sbjct: 7 KSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSV-ITSGFSWNL 65
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
T ++ MY+ C D+ +FD + R+L WN ++SG+ +N L + + +S +
Sbjct: 66 FAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEE 125
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+PD+ T ++ A + G VHG + G V VS AL+ MY KC V
Sbjct: 126 GH-RPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSI 184
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ M R +VSWNS+I G+ ++G + + + KM+ +EG P +TV+ L
Sbjct: 185 ARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKML--DEGVQPTNVTVMGAL 239
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 83/142 (58%), Gaps = 3/142 (2%)
Query: 170 LVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM 229
++ G+ K+ LS F + D+ ++P + F ++K CG +D+ G +HG
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDS-VRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITS 59
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL 289
G ++F ++ MY KC + + +F+ MPER+LV WN++I G+++NGF+ + L+
Sbjct: 60 GFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLV 119
Query: 290 IKMMGCEEGFIPDVITVVTVLP 311
++M EEG PD IT+V++LP
Sbjct: 120 LRM--SEEGHRPDSITIVSILP 139
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
K +H LV N F++ T L+ MY+ CG +R++FD + R++ WNA++ G+
Sbjct: 352 AKWIHGLVIRRFLDKNVFVM-TALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYG 410
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
+ L + +F E+ T +KP++ TF C + AC
Sbjct: 411 THGLGKTSVELFKEMKKGT-IKPNDITFLCALSAC 444
>gi|302756227|ref|XP_002961537.1| hypothetical protein SELMODRAFT_626 [Selaginella moellendorffii]
gi|300170196|gb|EFJ36797.1| hypothetical protein SELMODRAFT_626 [Selaginella moellendorffii]
Length = 675
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 102/180 (56%), Gaps = 5/180 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++ AC + I++G VH E + T+ + + T L++MY C S+ +FD ++
Sbjct: 119 VIDACSSLRRIDLGIAVHVEARESGTEMH--YAVATALVSMYGKCRRLERSKEMFDRMEE 176
Query: 162 RNLFQWNALVSGFTKN-ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN+ W A+++ + +N +L L +F + D ++PD F ++ACG + D+ G
Sbjct: 177 RNMVTWTAMITAYAQNAQLDWAALEVFDAMEGDG-IRPDKCVFVSALEACGALGDLAVGR 235
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H A + ++ V+N LIAMYGKC VEE +F+ P+R+L+SWN +I +++NG
Sbjct: 236 KIHRRIATARMEENLIVANGLIAMYGKCGGVEEARAVFDSTPQRSLLSWNLMIAAYAQNG 295
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 15/224 (6%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
+ VL++ C + + G+RVH +S + F++N L+ M+ G D+ RVFD
Sbjct: 3 DTYAVLIRQCTLARAVPEGRRVHAHIS-KHGCRDSFLLNL-LVQMFGRFGCVADASRVFD 60
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS-SDTEL---------KPDNFTFPCVI 207
S+ RN + WN +V+ F +N F ++ SD L + D TF VI
Sbjct: 61 SIPARNCYSWNIMVAAFAQNGHLQQARITFDQMPPSDRSLFALMDLDGIRADTITFVSVI 120
Query: 208 KACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLV 267
AC + + G VH A + G V+ AL++MYGKC +E ++F+ M ERN+V
Sbjct: 121 DACSSLRRIDLGIAVHVEARESGTEMHYAVATALVSMYGKCRRLERSKEMFDRMEERNMV 180
Query: 268 SWNSIICGFSENG-FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+W ++I +++N + ++ M G +G PD V+ L
Sbjct: 181 TWTAMITAYAQNAQLDWAALEVFDAMEG--DGIRPDKCVFVSAL 222
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 47/234 (20%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+ACG D+ +G+++H + A+ + + I+ LI MY CG ++R VFDS R+
Sbjct: 222 LEACGALGDLAVGRKIHRRI-ATARMEENLIVANGLIAMYGKCGGVEEARAVFDSTPQRS 280
Query: 164 LFQWNALVSGFTKNE--------------LYTDVLSIFVELSSDTELKPDNFTFPCVIKA 209
L WN +++ + +N + L+ F + D ++P+ TF ++ A
Sbjct: 281 LLSWNLMIAAYAQNGHPRHCSIGCPRGIWWAEEALAGFRIMDLDG-IQPNRVTFLSILDA 339
Query: 210 CGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK------------- 256
C +A + FG VH GDV V +L+ M+G+C +E
Sbjct: 340 CSSLASIEFGRVVHACIVDSCFAGDVHVGTSLVTMFGRCEHAQEADAAFHAIVAKNILAW 399
Query: 257 ------------------LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
LF+ MPERN++SW +I ++ +G E+ DL M
Sbjct: 400 TAILSANALSGHLDAARMLFDQMPERNVISWTGMISAYAYSGHRREAHDLFKAM 453
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 36/240 (15%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC---------------- 146
+L AC IE G+ VH + S F+ D + T L+TM+ C
Sbjct: 336 ILDACSSLASIEFGRVVHACIVDSC-FAGDVHVGTSLVTMFGRCEHAQEADAAFHAIVAK 394
Query: 147 ---------------GFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
G +R +FD + RN+ W ++S + + + +F +
Sbjct: 395 NILAWTAILSANALSGHLDAARMLFDQMPERNVISWTGMISAYAYSGHRREAHDLFKAMD 454
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ +P+ T+ ++AC G +H A + G D V+ L+ ++ KC +
Sbjct: 455 LLGQ-RPNKITYLKALEACAGGITAAEARTIHAKAIESGYSSDTQVAVGLLNLFEKCGSL 513
Query: 252 EEMVKLFEVMPER-NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F+ + ER +V+W+ +I ++++G S +L +M+ + G +P ITVV +L
Sbjct: 514 AIAERVFDDLGERKTVVAWSIMISAYAQSGRPWRSLELFTEMV--QSGVMPTEITVVNLL 571
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 88/219 (40%), Gaps = 43/219 (19%)
Query: 75 EESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFI 134
E+ L KA+ LL + + +A L+AC + +H + + +S+D
Sbjct: 444 REAHDLFKAMDLLGQRPNKITYLKA----LEACAGGITAAEARTIHA-KAIESGYSSDTQ 498
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTR-NLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
+ L+ ++ CG + RVFD L R + W+ ++S + ++ L +F E+
Sbjct: 499 VAVGLLNLFEKCGSLAIAERVFDDLGERKTVVAWSIMISAYAQSGRPWRSLELFTEMVQ- 557
Query: 194 TELKPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ + P T ++ AC GG H + ++GD YG C +
Sbjct: 558 SGVMPTEITVVNLLSACSHGGFL-------YHSWLFFVSMVGD----------YGLCPIL 600
Query: 252 EEMVKLFEV----------------MP-ERNLVSWNSII 273
+ V L ++ MP E N ++W S++
Sbjct: 601 DNYVCLVDILGRTGQLLLAQELLEAMPYEPNDIAWTSLL 639
>gi|125562361|gb|EAZ07809.1| hypothetical protein OsI_30067 [Oryza sativa Indica Group]
Length = 642
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 124/232 (53%), Gaps = 5/232 (2%)
Query: 81 NKAL-SLLQENLHNADLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
NKAL S Q L E T + +L AC +++G H LV + F + I +
Sbjct: 90 NKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNG-FEINCYIGSS 148
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L++MY+ CG ++RRVF+ + RN+ W ++++G T++ + + + +F ++ +K
Sbjct: 149 LVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQI-AGVKA 207
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D+ T V+ +CG + + G +H GL ++ V N+LI MY KC V + ++F
Sbjct: 208 DDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIF 267
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +R++ +W +I GF+ NG E+ DL +M G E+ +P+ + + VL
Sbjct: 268 RGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEG-EDKVMPNEVIFLGVL 318
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 108/211 (51%), Gaps = 6/211 (2%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK- 160
+ + A +++G + H L + S+ F++N LI MYS C +P +R V DS
Sbjct: 10 IAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNA-LINMYSSCNYPASARLVLDSAPR 68
Query: 161 -TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
++ WN +++G+ + + L F +++ + +++ D T V+ AC + G
Sbjct: 69 WASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKE-QVRLDEVTLLNVLVACARTGAMKVG 127
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
S H + G + ++ ++L++MY KC VEE ++F MPERN+V W S+I G +++
Sbjct: 128 SLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQS 187
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ DL M G D T+ TV+
Sbjct: 188 GRFKEAVDLFRDMQIA--GVKADDATIATVV 216
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 98/212 (46%), Gaps = 7/212 (3%)
Query: 74 CEESKSLNKALSLLQE-NLHNADLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSN 131
C +S +A+ L ++ + +AT ++ +CG +++G+ +H
Sbjct: 184 CTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHG-LGK 242
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ + LI MYS CG + ++F L R++F W ++ GF N L + L +F ++
Sbjct: 243 ELSVKNSLIDMYSKCGDVNKAYQIFRGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQME 302
Query: 192 SDTELKPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
+ ++ P+ F V+ AC GG+ + G+ H M+ L+ + ++ + G+
Sbjct: 303 GEDKVMPNEVIFLGVLTACSHGGLVEQGY-HHFHRMSKVYNLVPRIEHYGCMVDLLGRAK 361
Query: 250 FVEEMVKLFEVMP-ERNLVSWNSIICGFSENG 280
+ E + + MP ++V W S++ +G
Sbjct: 362 LLAEAEQFIKDMPVAPDVVVWRSLLFACRASG 393
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
DN++ I A + + GS H ++ K+ L D FV NALI MY C + +
Sbjct: 4 DNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVL 63
Query: 259 EVMPE--RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ P ++VSWN+II G+ G ++ +M +E D +T++ VL
Sbjct: 64 DSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQM--AKEQVRLDEVTLLNVL 115
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 109/210 (51%), Gaps = 5/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC ++ G+ VH V F +D + L++ Y CG D+ RVFD + +
Sbjct: 47 VLKACADAFEVRKGREVHGSV-VKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEK 105
Query: 163 NLFQWNALVSGFTKNEL-YTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+L WN ++ F+ N Y D L +F L D LKP++ T + + G
Sbjct: 106 DLVSWNTMIGVFSVNGWHYRDALDMF-RLMIDEGLKPNSITISSFLPVLVELEFFKAGRE 164
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VHG + +MGL D+F++N+LI MY K E +F + +N+VSWN++I F++N F
Sbjct: 165 VHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRF 224
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ L+ +M + G +P+ +T VLP
Sbjct: 225 ELVAVGLVRQMQ--DYGELPNSVTFTNVLP 252
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 86/153 (56%), Gaps = 15/153 (9%)
Query: 165 FQWNALVSGFTKN------ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
F WN L+ G++ E+Y ++ I V +PD+ TFP V+KAC +V
Sbjct: 8 FLWNTLIRGYSIAGVGGGLEVYNQMVRIGV--------RPDDHTFPFVLKACADAFEVRK 59
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G VHG K+G DVFV N L++ YG C + + ++F+ MPE++LVSWN++I FS
Sbjct: 60 GREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSV 119
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
NG+ + ++M +EG P+ IT+ + LP
Sbjct: 120 NGWHYRDALDMFRLM-IDEGLKPNSITISSFLP 151
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 5/184 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+ VH S +D I LI MY+ G ++ VF L +N+ WNA+++ F
Sbjct: 162 GREVHG-SSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFA 220
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+N + + ++ EL P++ TF V+ AC + V G +H + MG D+
Sbjct: 221 QNRFELVAVGLVRQMQDYGEL-PNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDL 279
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL--IKMM 293
FVSNAL MY K ++ +F+ R+ VS+N +I G S+ ES L +++M
Sbjct: 280 FVSNALTDMYAKSGHLKLARNVFDT-SLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLM 338
Query: 294 GCEE 297
G ++
Sbjct: 339 GLKQ 342
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 3/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + GK +H S + D ++ L MY+ G +R VFD+ R
Sbjct: 250 VLPACARMGLVRPGKEIHAR-SIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDT-SLR 307
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ +N L+ G ++ ++ LS+F E+ LK DN +F + AC + + G +
Sbjct: 308 DEVSYNILIVGHSQTSDCSESLSLFSEMQL-MGLKQDNVSFMGALSACANLTAIKQGKEI 366
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + +FV+N+L+ Y KC + +F+ M +++ SWN++I G+ G
Sbjct: 367 HGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGEL 426
Query: 283 CESFDLLIKM 292
+ DL M
Sbjct: 427 DTAIDLFENM 436
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 71 TTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFS 130
T+ C ES SL + L+ N A L AC + I+ GK +H +
Sbjct: 322 TSDCSESLSLFSEMQLMGLKQDNVSFMGA----LSACANLTAIKQGKEIHGFLLRKLFHI 377
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
+ F+ N+ L+ Y+ CG +R +FD + +++ WN ++ G+ + +F +
Sbjct: 378 HLFVANS-LLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENM 436
Query: 191 SSDTELKPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
D +++ D+ +F V+ AC GG+ + G G+ ++ + G+
Sbjct: 437 RKD-DVEYDSVSFIAVLSACSHGGLLEK--GRKYFDELKARGIEPTQMHYACMVDLLGRA 493
Query: 249 AFVE---EMVKLFEVMPERNLVSWNSII 273
+E E++K ++P+ N+ W +++
Sbjct: 494 GLMEEAAELIKGLPIVPDANI--WGALL 519
>gi|302820510|ref|XP_002991922.1| hypothetical protein SELMODRAFT_134446 [Selaginella moellendorffii]
gi|300140308|gb|EFJ07033.1| hypothetical protein SELMODRAFT_134446 [Selaginella moellendorffii]
Length = 690
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 107/206 (51%), Gaps = 12/206 (5%)
Query: 107 CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQ 166
C + + GK +H+ V S D I+ L+TMYS CG +R VF +K +N
Sbjct: 147 CSELQCFQAGKAIHDCVLEQGAES-DVIVANNLVTMYSKCGRIDGARCVFRRIKNKNPIS 205
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
WNA+++ F + + L ++VE PD T KAC + D+ G +H A
Sbjct: 206 WNAMIAAFAQCGDFASALELYVE-----HPVPDKITLILAAKACASLGDLDRGREIHARA 260
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM--PERNLVSWNSIICGFSENGFSCE 284
++GL D+ V+N+LI MYGKC V + +LF+ + R+++SWNSII + G S +
Sbjct: 261 VELGLESDLLVANSLIGMYGKCYCVGDAKRLFDGLEAKNRDVISWNSIIAAYILAGMSSQ 320
Query: 285 SFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L + M E P+ IT + ++
Sbjct: 321 ALELFRERMDVE----PNRITFIALI 342
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 8/205 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C K + G+ +H + AS + F+ N L+ MY CG D++ FD + +
Sbjct: 42 LLRECERSKSLSQGRYIHAHILASGKSGKTFLGNL-LVRMYGKCGSIADAKEAFDQIHRK 100
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+F W ++ F + + I+ + + ++PD F + C + G +
Sbjct: 101 NVFSWTIMLGAFADCGHHRQAIQIYHAMVLEG-VRPDCVAFASIAGICSELQCFQAGKAI 159
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G DV V+N L+ MY KC ++ +F + +N +SWN++I F++ G
Sbjct: 160 HDCVLEQGAESDVIVANNLVTMYSKCGRIDGARCVFRRIKNKNPISWNAMIAAFAQCGDF 219
Query: 283 CESFDLLIKMMGCEEGFIPDVITVV 307
+ +L + E +PD IT++
Sbjct: 220 ASALELYV------EHPVPDKITLI 238
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 123/265 (46%), Gaps = 42/265 (15%)
Query: 81 NKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLI 140
++AL L +E + + L+ AC D+E G+ +HE + S++F+ + + L+
Sbjct: 319 SQALELFRERMDVEPNRITFIALIDACSTLCDLEQGRWIHERIR-SSEFAREVAVENGLL 377
Query: 141 TMYSLCGF---------PLDSRR---------------------VFDSLKTRNLFQWNAL 170
MY+ CG ++ RR VF +++R++ W A+
Sbjct: 378 LMYAKCGSIEEAMAIFESMEGRRTLATSLVIMYCKFGCVADAMAVFSGMRSRDVVAWTAM 437
Query: 171 VSGFTKNELYT-DVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF---GSGVHGMA 226
++ F++ E + + + F ++ D KPD TF V+ G IA +G G VH
Sbjct: 438 ITAFSQQEHTSMEAVDYFCQMDLDGS-KPDEVTFASVL---GSIARLGLLSRGRSVHCDV 493
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM-PERNLVSWNSIICGFSENGFSCES 285
G DV V AL+ MY KC + + + F+ + RNLVSWN++I +++G
Sbjct: 494 LACGFQSDVVVGTALLDMYSKCGSLIDAKRAFDDLGGSRNLVSWNAMIAAMAKHGDWSSG 553
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
F+L M+ EG P+ +T +L
Sbjct: 554 FELYRAMI--LEGVRPNDVTFTNML 576
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 107/239 (44%), Gaps = 39/239 (16%)
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL--KTR 162
+AC D++ G+ +H + +D ++ LI MY C D++R+FD L K R
Sbjct: 242 KACASLGDLDRGREIHAR-AVELGLESDLLVANSLIGMYGKCYCVGDAKRLFDGLEAKNR 300
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN++++ + + + L +F E +++P+ TF +I AC + D+ G +
Sbjct: 301 DVISWNSIIAAYILAGMSSQALELFRE---RMDVEPNRITFIALIDACSTLCDLEQGRWI 357
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-------------------- 262
H +V V N L+ MY KC +EE + +FE M
Sbjct: 358 HERIRSSEFAREVAVENGLLLMYAKCGSIEEAMAIFESMEGRRTLATSLVIMYCKFGCVA 417
Query: 263 ----------ERNLVSWNSIICGFSENGF-SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
R++V+W ++I FS+ S E+ D +M +G PD +T +VL
Sbjct: 418 DAMAVFSGMRSRDVVAWTAMITAFSQQEHTSMEAVDYFCQMD--LDGSKPDEVTFASVL 474
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL-KTRNLFQWNALVSGF 174
G+ VH V A F +D ++ T L+ MYS CG +D++R FD L +RNL WNA+++
Sbjct: 486 GRSVHCDVLA-CGFQSDVVVGTALLDMYSKCGSLIDAKRAFDDLGGSRNLVSWNAMIAAM 544
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIAD 215
K+ ++ ++ + + ++P++ TF ++ C GG D
Sbjct: 545 AKHGDWSSGFELYRAMILEG-VRPNDVTFTNMLFLCSHGGGGD 586
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+L DN + +++ C + G +H G G F+ N L+ MYGKC + +
Sbjct: 31 DLDVDNDVYATLLRECERSKSLSQGRYIHAHILASGKSGKTFLGNLLVRMYGKCGSIADA 90
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
+ F+ + +N+ SW ++ F++ G ++ + M+ EG PD + ++
Sbjct: 91 KEAFDQIHRKNVFSWTIMLGAFADCGHHRQAIQIYHAMV--LEGVRPDCVAFASI 143
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 118/225 (52%), Gaps = 7/225 (3%)
Query: 89 ENLHNADLKEAT---GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSL 145
+N+ A +K G +L A ++ G VH SN ++ + L++MY+
Sbjct: 316 QNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYV-GSSLVSMYAK 374
Query: 146 CGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPC 205
CG +++VFD+L +N+ WNA++ G+ +N +V+ +F + S PD+FT+
Sbjct: 375 CGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKS-CGFYPDDFTYSS 433
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
++ AC + + G +H + K ++FV NAL+ MY K +E+ + FE++ R+
Sbjct: 434 ILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRD 493
Query: 266 LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
VSWN II G+ + E+F L +M G +PD +++ ++L
Sbjct: 494 NVSWNVIIVGYVQEEDEVEAFHLFRRMNLL--GILPDEVSLASIL 536
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 125/235 (53%), Gaps = 7/235 (2%)
Query: 78 KSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
+++N +L E +++ ++ A+ LL AC ++ + +G+++H L+ +D +
Sbjct: 612 QAVNLFRDMLVEGINSTEITFAS--LLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGV 669
Query: 138 RLITMYSLCGFPLDSRRVFDSLKT-RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
L+ MY D+ +F ++ W A++SG ++N+ L ++ E+ S L
Sbjct: 670 SLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVL 729
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
PD TF ++AC ++ + G+ H + G D S+AL+ MY KC V+ ++
Sbjct: 730 -PDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQ 788
Query: 257 LFEVMP-ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ M +++++SWNS+I GF++NG++ ++ + +M + PD +T + VL
Sbjct: 789 VFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMK--QSHVTPDDVTFLGVL 841
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 92/179 (51%), Gaps = 3/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + +I Y G ++ +F + RN+ WN ++SG K + + F +
Sbjct: 260 DQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMR 319
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+K T V+ A +A + FG VH A K GL +V+V ++L++MY KC +
Sbjct: 320 K-AGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKM 378
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E K+F+ + E+N+V WN+++ G+ +NG++ E +L M C GF PD T ++L
Sbjct: 379 EAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSC--GFYPDDFTYSSIL 435
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 96/176 (54%), Gaps = 2/176 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC K +++G ++H ++ +F+++ + L+ MY+ G D+R+ F+ ++ R
Sbjct: 434 ILSACACLKYLDLGHQLHSVI-IKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNR 492
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN ++ G+ + E + +F ++ + PD + ++ AC + + G V
Sbjct: 493 DNVSWNVIIVGYVQEEDEVEAFHLFRRMNL-LGILPDEVSLASILSACASVRGLEQGKQV 551
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
H ++ K G ++ ++LI MY KC ++ K+ MPER++VS N++I G+++
Sbjct: 552 HCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQ 607
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 3/182 (1%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F + ++ ++ +Y+ C + R F L+ +++ WN+++S +K V+ F
Sbjct: 90 FWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYF- 148
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
L ++ + P+ FTF V+ +C + V G VH KMG + ALI MY KC
Sbjct: 149 GLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKC 208
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
F+ + +F+ E + VSW S+I G+ + G E+ + +M + G PD + VT
Sbjct: 209 NFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEME--KVGQEPDQVAFVT 266
Query: 309 VL 310
V+
Sbjct: 267 VI 268
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 13/213 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + +E GK+VH L S T + LI MY+ CG + ++ + R
Sbjct: 535 ILSACASVRGLEQGKQVHCL-SVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPER 593
Query: 163 NLFQWNALVSGFTKNELYTDV---LSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
++ NAL++G+ + L V + VE + TE+ TF ++ AC + G
Sbjct: 594 SVVSMNALIAGYAQINLEQAVNLFRDMLVEGINSTEI-----TFASLLDACHEQQKLNLG 648
Query: 220 SGVHGMAAKMGL-IGDVFVSNALIAMYGKCAFVEEMVKLF-EVMPERNLVSWNSIICGFS 277
+H + KMGL + D F+ +L+ MY + LF E ++ V W ++I G S
Sbjct: 649 RQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLS 708
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+N S + L +M C +PD T V+ L
Sbjct: 709 QNDCSVVALQLYKEMRSCN--VLPDQATFVSAL 739
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 37/192 (19%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
++L +C + ++ G++VH V F + LI MY+ C F D+R +FD
Sbjct: 164 AIVLSSCARLEMVKCGRQVHCNV-VKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAV 222
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ W +++ G+ K L + + +F E+ + +PD F VI A
Sbjct: 223 ELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQ-EPDQVAFVTVINA----------- 270
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
Y ++ LF MP RN+V+WN +I G ++ G
Sbjct: 271 ------------------------YVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGG 306
Query: 281 FSCESFDLLIKM 292
+ E+ + M
Sbjct: 307 YGVEAIEFFQNM 318
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H + K+G + N ++ +Y KCA V+ + F+ + ++++++WNSI+ S+ GF
Sbjct: 81 IHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGF 140
Query: 282 SCESFDLLIKMMGC--EEGFIPDVITVVTVL 310
L++K G G P+ T VL
Sbjct: 141 P----HLVVKYFGLLWNSGVWPNEFTFAIVL 167
>gi|297738048|emb|CBI27249.3| unnamed protein product [Vitis vinifera]
Length = 707
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 111/210 (52%), Gaps = 5/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G L+ AC + GK VH V S N F++ T L+ +Y CG D+ VFD L
Sbjct: 289 GSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLV-TPLLDLYFKCGDIRDAFSVFDELS 347
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
T +L W A++ G+ + + L +F + +L P+ T V+ AC + G
Sbjct: 348 TIDLVSWTAMIVGYAQRGYPREALKLFTD-ERWKDLLPNTVTTSSVLSACAQTGSLNMGR 406
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH + K+G D NAL+ MY KC + + +FE + ++++++WNSII G+++NG
Sbjct: 407 SVHCLGIKLG-SEDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNG 465
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ E+ +L +M + PD IT+V+VL
Sbjct: 466 YAYEALELFDQMR--SDSVYPDAITLVSVL 493
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 110/210 (52%), Gaps = 7/210 (3%)
Query: 102 VLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
++L+AC ++ + G+++H ++V S D + T L+ MY+ C DSRRVFD +
Sbjct: 190 IVLKACSELRETDEGRKLHCQIVKVG---SPDSFVLTGLVDMYAKCREVEDSRRVFDEIL 246
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN+ W +++ G+ +N+ + L +F + ++ + +T ++ AC + + G
Sbjct: 247 DRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGL-VEGNQYTLGSLVTACTKLGALHQGK 305
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VHG K G + F+ L+ +Y KC + + +F+ + +LVSW ++I G+++ G
Sbjct: 306 WVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRG 365
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ L + +P+ +T +VL
Sbjct: 366 YPREALKLFTDERW--KDLLPNTVTTSSVL 393
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 96/189 (50%), Gaps = 15/189 (7%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
+++H L+ S D + T+L+++Y G +R +FD ++ +L+ W ++ +
Sbjct: 103 RKIHALLVVHG-LSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYFL 161
Query: 177 NELYTDVLSIFVELSSDTELKP-----DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
N+ Y++++ + +T L+ DN F V+KAC + + G +H K+G
Sbjct: 162 NDSYSEIVQFY-----NTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVG- 215
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
D FV L+ MY KC VE+ ++F+ + +RN+V W S+I G+ +N E L +
Sbjct: 216 SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNR 275
Query: 292 MMGCEEGFI 300
M EG +
Sbjct: 276 M---REGLV 281
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
T +L AC + +G+ VH L S D L+ MY+ C D+R VF+++
Sbjct: 389 TSSVLSACAQTGSLNMGRSVHCL--GIKLGSEDATFENALVDMYAKCHMIGDARYVFETV 446
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+++ WN+++SG+T+N + L +F ++ SD+ + PD T V+ AC + G
Sbjct: 447 FDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDS-VYPDAITLVSVLSACASVGAYRVG 505
Query: 220 SGVHGMAAKMGLI 232
S +HG A K GL+
Sbjct: 506 SSLHGYAIKAGLL 518
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 119/238 (50%), Gaps = 35/238 (14%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCG---------------- 147
+ CG +D+E+G+R+H V + ++N L+ MY CG
Sbjct: 235 VSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNA-LMDMYIKCGSLEMAKSVFERIEHRT 293
Query: 148 -------------FPL--DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
F L D+R+VFD + R++F WNAL++G+ + + + LS+F E+
Sbjct: 294 VVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQ- 352
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ + PD T ++ AC + + G VH K L+ V + +LI MY KC +E
Sbjct: 353 EASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIE 412
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + +F+ +PE+N ++W ++ICG + +G + E+ + M+ E G PD IT + VL
Sbjct: 413 KAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMI--ELGQKPDEITFIGVL 468
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+AC ++ G V S+ F++N S+ G D+RR+FD R
Sbjct: 131 LLKACARLREWGYGDAALAHVLRLGLDSDVFVVNA-ATHFLSIRGPMEDARRLFDRSPVR 189
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVEL-SSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+L WN L+ G+ + + L +F + + D ++PD T + CG + D+ G
Sbjct: 190 DLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRR 249
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG G+ V + NAL+ MY KC +E +FE + R +VSW ++I GF++ G
Sbjct: 250 LHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGL 309
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 67/127 (52%)
Query: 184 LSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIA 243
L ++ L +PD+ TFP ++KAC + + G+G ++GL DVFV NA
Sbjct: 109 LPLYRALLRSGTARPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDVFVVNAATH 168
Query: 244 MYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
+E+ +LF+ P R+LVSWN++I G+ G E+ +L +M+ + PD
Sbjct: 169 FLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDE 228
Query: 304 ITVVTVL 310
+T++ +
Sbjct: 229 VTMIAAV 235
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 87/210 (41%), Gaps = 24/210 (11%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGV--------LLQACGHEKDIEIGKRVHELVSAST 127
+ K +ALSL E ++EA+ V LL AC +E+G VH +
Sbjct: 337 QCKQCKEALSLFHE------MQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIE-KH 389
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
+ + T LI MY+ CG + +F + +N W A++ G + + + F
Sbjct: 390 RLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHF 449
Query: 188 ---VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG-MAAKMGLIGDVFVSNALIA 243
+EL KPD TF V+ AC V G M K L + + +I
Sbjct: 450 RTMIELGQ----KPDEITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKHYSCMID 505
Query: 244 MYGKCAFVEEMVKLFEVMP-ERNLVSWNSI 272
+ G+ ++E +L MP E + V W +I
Sbjct: 506 LLGRAGHLDEAEQLVNTMPMEPDAVVWGAI 535
>gi|297722397|ref|NP_001173562.1| Os03g0644100 [Oryza sativa Japonica Group]
gi|53749418|gb|AAU90276.1| PPR repeat containing protein [Oryza sativa Japonica Group]
gi|108710059|gb|ABF97854.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|215707171|dbj|BAG93631.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255674740|dbj|BAH92290.1| Os03g0644100 [Oryza sativa Japonica Group]
Length = 616
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 107/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL ACG + +GK +H + ++ N I + L+ Y CG + R+ +++ R
Sbjct: 388 LLSACGSLQSPYLGKELHAQIIKNSMEEN-LQIGSTLVWFYCKCGEYTYAARILEAMPDR 446
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W AL+SG+ + L ++ D +KP+ +T+ +KAC + + +G +
Sbjct: 447 DAISWTALISGYNNLGHNVEALKSLDDMLWDG-VKPNTYTYSSALKACAKLEALQYGRKI 505
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K +VFV ++LI MY +C V+E +F+ MPE NLV+W II GF++NG
Sbjct: 506 HGFVNKTQDFSNVFVGSSLIDMYMRCGKVDEARSVFDAMPEHNLVTWKVIITGFAQNGLC 565
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + M +EG D + TVL
Sbjct: 566 EEALKYMYLMQ--QEGHEVDDFVLSTVL 591
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 112/208 (53%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL++CG D ++G++VH + +SN I+++ + Y+ CG + +FD + R
Sbjct: 187 LLKSCGERCDAKLGQQVHCCI-VKGGWSN-VIVDSAIAHFYAQCGDVASASAIFDKMAYR 244
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +++ + ++ L +F E+ S+ +P+ FT V+KAC V FG +
Sbjct: 245 DVISWTTMITAYVQHGHGGQALRMFSEMVSEG-FRPNEFTVCSVLKACAEEKAVRFGKQL 303
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K D+ + +AL+ MY +C V + +F++MP RN ++W S+I G++++G
Sbjct: 304 HCAVLKKMYKNDIHIGSALVTMYARCGEVFDAQAVFDMMPRRNTITWTSMISGYAQSGHG 363
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E LL + M F+ + +T+V +L
Sbjct: 364 -EKAILLFRKMKMRRVFVNN-LTIVGLL 389
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC EK + GK++H V + ND I + L+TMY+ CG D++ VFD + R
Sbjct: 287 VLKACAEEKAVRFGKQLHCAV-LKKMYKNDIHIGSALVTMYARCGEVFDAQAVFDMMPRR 345
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N W +++SG+ ++ + +F ++ + +N T ++ ACG + G +
Sbjct: 346 NTITWTSMISGYAQSGHGEKAILLFRKMKM-RRVFVNNLTIVGLLSACGSLQSPYLGKEL 404
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K + ++ + + L+ Y KC ++ E MP+R+ +SW ++I G++ G +
Sbjct: 405 HAQIIKNSMEENLQIGSTLVWFYCKCGEYTYAARILEAMPDRDAISWTALISGYNNLGHN 464
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M+ +G P+ T + L
Sbjct: 465 VEALKSLDDMLW--DGVKPNTYTYSSAL 490
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 135/301 (44%), Gaps = 17/301 (5%)
Query: 10 CLWSPLFPSLRQKKSQPQFPATVIQRNKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQE 69
C SP P Q S P F + + + + S SAK + + H
Sbjct: 5 CPASP--PPPIQASSLPPFRTNSLSPTVRGGNAAPRRPLARSFSAKNRSPRARNRHAAAG 62
Query: 70 ITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQF 129
+ + + +L NA EA L+ CG + +RVH + S
Sbjct: 63 DGGGYGSPEQEGRG----ESSLPNA---EALASSLRDCGGADGV---RRVHAVAVRSLDS 112
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE 189
F+ N LI+ Y+ D+R VFD + R++ W A+++ + K Y +V+ +F +
Sbjct: 113 LGTFVANN-LISAYARFDEVSDAREVFDEMPERSVVSWTAMMNVYLKLGHYGEVVRLFFD 171
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
+ + ++ ++ TF C++K+CG D G VH K G +V V +A+ Y +C
Sbjct: 172 MVG-SGVQGNSLTFVCLLKSCGERCDAKLGQQVHCCIVKGGW-SNVIVDSAIAHFYAQCG 229
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
V +F+ M R+++SW ++I + ++G ++ + +M+ EGF P+ TV +V
Sbjct: 230 DVASASAIFDKMAYRDVISWTTMITAYVQHGHGGQALRMFSEMV--SEGFRPNEFTVCSV 287
Query: 310 L 310
L
Sbjct: 288 L 288
>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 974
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 114/214 (53%), Gaps = 4/214 (1%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
+ + G +L A + G VH + ++ + + L+ MY+ C +++VF
Sbjct: 309 RSSLGSVLSAIASLSMLNYGSMVHAQATKEG-LDDNVYVGSALVNMYAKCSKMDAAKQVF 367
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
+SL RN+ WNA++ GF +N L +V+ F + +PD FTF + AC + +
Sbjct: 368 NSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGP-QPDEFTFTSIFSACASLHYL 426
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
FG +H + K ++FV+NAL+ MY K ++E K FE+M + VSWN+II G+
Sbjct: 427 NFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGY 486
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ E+F + +M+ G +PD +++ +++
Sbjct: 487 VQEEYNDEAFFMFRRMV--SNGVLPDEVSLASIV 518
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 122/236 (51%), Gaps = 9/236 (3%)
Query: 80 LNKALSLLQENLHNADLK--EAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
L +A+ L QE + LK E T LL C + +G+++H V S+ ++
Sbjct: 592 LEEAIHLFQE-IQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVC 650
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKT-RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
L+ +Y +DS +F L+ + L W AL+SG+ + + L + + SD
Sbjct: 651 VSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNI 710
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
L PD F V++AC G++ + G +H + G D ++LI MY KC V+ +
Sbjct: 711 L-PDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSL 769
Query: 256 KLFEVMPER-NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F MP R N++SWNS+I G ++NG++ E+ ++ +M ++ IPD +T + VL
Sbjct: 770 QVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQME--QQSIIPDEVTFLGVL 823
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 96/177 (54%), Gaps = 3/177 (1%)
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
++ ++ +Y CG +++ F L+ +++F WN+++S + + L+ V+ FV + +
Sbjct: 77 LLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMW-N 135
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
E++P+ FTF V+ AC G+ DV FG VH K G F LI MY KC ++ +
Sbjct: 136 HEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRD 195
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ + VSW ++I G+ +GF E+ + +M G PD IT+VTV+
Sbjct: 196 ARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQ--RVGHAPDQITLVTVV 250
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 3/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I ++ Y G D+R++F + N+ WN ++SG K + +S F+EL
Sbjct: 242 DQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELK 301
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
T LK + V+ A ++ + +GS VH A K GL +V+V +AL+ MY KC+ +
Sbjct: 302 K-TGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKM 360
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++F + ERN+V WN+++ GF++NG + E + M G PD T ++
Sbjct: 361 DAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMK--RHGPQPDEFTFTSIF 417
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 2/175 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ AC + G ++H ++ + SN F+ N L+ MY+ G ++R+ F+ +K
Sbjct: 416 IFSACASLHYLNFGGQLHTVMIKNKFASNLFVANA-LVDMYAKSGALKEARKQFELMKIH 474
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA++ G+ + E + +F + S+ L PD + ++ AC + ++ G
Sbjct: 475 DNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVL-PDEVSLASIVSACANVQELKRGQQC 533
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
H + K+GL ++LI MY KC V +F MP RN+VS N++I G++
Sbjct: 534 HCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYT 588
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 7/210 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC + ++++ G++ H L+ + LI MY CG L +R VF S+ +R
Sbjct: 517 IVSACANVQELKRGQQCHCLL-VKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSR 575
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ NAL++G+T L + + +F E+ LKP TF ++ C G + G +
Sbjct: 576 NVVSVNALIAGYTMGHL-EEAIHLFQEIQM-VGLKPTEVTFAGLLDGCDGAFMLNLGRQI 633
Query: 223 HGMAAKMGLIGDV-FVSNALIAMY-GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
HG K G + V +L+ +Y FV+ E+ + LV W ++I G+++
Sbjct: 634 HGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQN 693
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ M + +PD +VL
Sbjct: 694 HHEKALQFYQHMR--SDNILPDQAAFASVL 721
>gi|225439799|ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Vitis vinifera]
Length = 667
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 117/215 (54%), Gaps = 5/215 (2%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A G L+Q C + + K++H + S+ ++F+ ++LIT YS ++ +VFD
Sbjct: 36 AFGRLIQHCSDHRLLRQAKQLHARIVLSSLTPDNFLA-SKLITFYSKSNHLYEAHKVFDK 94
Query: 159 LKTRNLFQWNALVSGFTKNEL--YTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI-AD 215
+ +N+F WNA++ G++ + + +T L + S LKPDNFT CV+KA + D
Sbjct: 95 ILDKNIFSWNAMLIGYSIHNMHVHTLNLLSSLLPSYSLTLKPDNFTITCVLKALSVLFPD 154
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
V + G D+FV NALI Y +C LF+ M +R++VSWNS+I G
Sbjct: 155 SILAKEVQCFVLRHGFDSDIFVVNALITYYSRCDEYGIARILFDRMHDRDIVSWNSMIAG 214
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+S+ GF + +L KM+ G P+ +TVV+VL
Sbjct: 215 YSQGGFYEDCKELYRKMLD-STGLRPNGVTVVSVL 248
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 29/212 (13%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F +D + LIT YS C +R +FD + R++ WN++++G+++ Y D ++
Sbjct: 170 FDSDIFVVNALITYYSRCDEYGIARILFDRMHDRDIVSWNSMIAGYSQGGFYEDCKELYR 229
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
++ T L+P+ T V++AC D+ FG VH + + DV N+LI +Y KC
Sbjct: 230 KMLDSTGLRPNGVTVVSVLQACAQTNDLVFGMKVHQFIIERKVEMDVSAHNSLIGLYAKC 289
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM--------------- 293
++ +LF M ++ V++ SI+ G+ +GF ++ DL +M
Sbjct: 290 GSLDYARELFNEMSNKDEVTYGSIVSGYMTHGFVDKAMDLFREMKNPRLSTWNAVISGLV 349
Query: 294 --GCEE------------GFIPDVITVVTVLP 311
C E GF P+ +T+ ++LP
Sbjct: 350 QNNCNEGILELVQEMQEFGFRPNAVTLSSILP 381
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 104/239 (43%), Gaps = 35/239 (14%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL--- 159
+LQAC D+ G +VH+ + + D + LI +Y+ CG +R +F+ +
Sbjct: 247 VLQACAQTNDLVFGMKVHQFI-IERKVEMDVSAHNSLIGLYAKCGSLDYARELFNEMSNK 305
Query: 160 -------------------KTRNLFQ---------WNALVSGFTKNELYTDVLSIFVELS 191
K +LF+ WNA++SG +N +L + E+
Sbjct: 306 DEVTYGSIVSGYMTHGFVDKAMDLFREMKNPRLSTWNAVISGLVQNNCNEGILELVQEMQ 365
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ +P+ T ++ +++ G +H A + G +++V+ ++I Y K F+
Sbjct: 366 -EFGFRPNAVTLSSILPTFSCFSNLKGGKAIHAYAIRNGYAHNIYVATSIIDAYAKLGFL 424
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ +R+L+ W +II +S +G + + L M+ G PD +T VL
Sbjct: 425 RGAQWVFDQSKDRSLIVWTAIISAYSAHGDANAALRLFGDML--SNGTQPDPVTFTAVL 481
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 4/167 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK +H + ++++ + T +I Y+ GF ++ VFD K R+L W A++S ++
Sbjct: 392 GKAIHAY-AIRNGYAHNIYVATSIIDAYAKLGFLRGAQWVFDQSKDRSLIVWTAIISAYS 450
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG-MAAKMGLIGD 234
+ L +F ++ S+ +PD TF V+ AC V + M K G
Sbjct: 451 AHGDANAALRLFGDMLSNGT-QPDPVTFTAVLAACAHSGMVNEAWKIFDEMFLKYGFQPC 509
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENG 280
V ++ + + + E + MP E N W +++ G S +G
Sbjct: 510 VEHYACMVGVLSRAGMLSEAAEFICKMPIEPNAKVWGALLNGVSVSG 556
>gi|125556054|gb|EAZ01660.1| hypothetical protein OsI_23695 [Oryza sativa Indica Group]
Length = 252
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 115/208 (55%), Gaps = 6/208 (2%)
Query: 104 LQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ AC + + G++VH +++A ++ + TRL+TMY CG D+R V D + R
Sbjct: 17 ITACIERRALWEGRKVHARMITA--RYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPER 74
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W ++SG+++ E + + L +F+++ + P+ +T V+ +C G + G V
Sbjct: 75 SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCI-PNEYTLATVLTSCSGPQSIYQGKQV 133
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + K +FV ++L+ MY K ++E ++F+ +PER++VS +II G+++ G
Sbjct: 134 HSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLD 193
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL ++ EG + +T T++
Sbjct: 194 EEALDLFRQLYS--EGMQCNHVTFTTLV 219
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L +C + I GK+VH L+ T F + + + L+ MY+ ++RRVFD+L
Sbjct: 115 ATVLTSCSGPQSIYQGKQVHSLL-VKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 173
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
R++ A++SG+ + L + L +F +L S+ ++ ++ TF ++ A G+A + +G
Sbjct: 174 ERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEG-MQCNHVTFTTLVTALSGLASLDYG 231
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 109/210 (51%), Gaps = 3/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +++AC DI++G+++H V S F + LI+MY+ G + VF +
Sbjct: 264 GSVIKACYIAGDIDLGRQLHAHVIKS-WFGHHLTSQNALISMYTNFGQIEHASNVFTRIP 322
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
T++L W +++G+ + + L +F +L +P+ F F V AC + ++ +G
Sbjct: 323 TKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGK 382
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VHGM K GL +VF +L MY K F+ F + ++VSWN+II F++NG
Sbjct: 383 QVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNG 442
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ D +M+ G PD IT +++L
Sbjct: 443 DANEAIDFFRQMI--HIGLTPDSITYISLL 470
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 103/191 (53%), Gaps = 2/191 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ AC + + ++ K++H+ V S + I+ +I MY CG D+R+VFD+++
Sbjct: 165 LVLACANFRSLDYAKKIHDHVLKSN-YQPSIILQNHMINMYGKCGSMKDARKVFDTMQLP 223
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W +++SG+++N D + ++++++ + PD TF VIKAC D+ G +
Sbjct: 224 NVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQF-PDQLTFGSVIKACYIAGDIDLGRQL 282
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K + NALI+MY +E +F +P ++L+SW ++I G+ + G+
Sbjct: 283 HAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYR 342
Query: 283 CESFDLLIKMM 293
E+ L ++
Sbjct: 343 VEALYLFRDLL 353
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 113/233 (48%), Gaps = 7/233 (3%)
Query: 81 NKALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
N+A+ ++ +H ++ LL CG + G+++H + F + +
Sbjct: 445 NEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYI-VKIGFDKEITVCNS 503
Query: 139 LITMYSLCGFPLDSRRVF-DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L+TMY+ C D+ VF D + NL WNA++S + + + ++ E+ K
Sbjct: 504 LLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGN-K 562
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
PD+ T ++ C + +G G+ VH + K GLI DV V N LI MY KC ++ +
Sbjct: 563 PDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDV 622
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ ++VSW+S+I G+++ G E+ +L M G P+ +T + L
Sbjct: 623 FDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNL--GVQPNEVTYLGAL 673
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Query: 168 NALVSGFTKNELYTDVLSIF-VEL-SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
N+ + K Y + L F L +S++ +P +T ++ AC + + +H
Sbjct: 127 NSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPSTYT--SLVLACANFRSLDYAKKIHDH 184
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
K + + N +I MYGKC +++ K+F+ M N+VSW S+I G+S+NG + ++
Sbjct: 185 VLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDA 244
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
+ I+M G PD +T +V+
Sbjct: 245 IIMYIQMT--RSGQFPDQLTFGSVI 267
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 115/220 (52%), Gaps = 14/220 (6%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
K A ++Q+C +E+GK VH + F+ ++T L+ MY+ G DS VF
Sbjct: 167 KFAYSAIIQSCIGLDSLELGKMVHAQI-VMRGFATHIFVSTSLLNMYAKLGSIEDSYWVF 225
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
+ + N WNA++SG T N L+ + +FV + + P+ +T V KA G + DV
Sbjct: 226 NMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGA-CTPNMYTLVSVSKAVGKLVDV 284
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS------WN 270
G V A+++G+ G+V V ALI MY KC + + +F+ N ++ WN
Sbjct: 285 NMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDT----NFINCGVNTPWN 340
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++I G+S++G S E+ +L ++M C+ G D+ T +V
Sbjct: 341 AMISGYSQSGCSQEALELYVQM--CQNGITSDLYTYCSVF 378
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 106/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDF-IINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+ C + I K VH LV S D ++ +YS C + VFD +
Sbjct: 70 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 129
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
RN+F W ++ G T++ L+ D F E+ ++ + PD F + +I++C G+ + G
Sbjct: 130 RNVFSWTVMIVGSTEHGLFFDGFKFFCEML-NSGILPDKFAYSAIIQSCIGLDSLELGKM 188
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH G +FVS +L+ MY K +E+ +F +M E N VSWN++I G + NG
Sbjct: 189 VHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGL 248
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTV 309
E+FDL ++M P++ T+V+V
Sbjct: 249 HLEAFDLFVRMK--NGACTPNMYTLVSV 274
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 112/209 (53%), Gaps = 7/209 (3%)
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS--LKTR 162
+A G D+ +GK V S + ++ T LI MYS CG D+R VFD+ +
Sbjct: 276 KAVGKLVDVNMGKEVQNCAS-ELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCG 334
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
WNA++SG++++ + L ++V++ + + D +T+ V A + FG V
Sbjct: 335 VNTPWNAMISGYSQSGCSQEALELYVQMCQNG-ITSDLYTYCSVFNAIAASKSLQFGRVV 393
Query: 223 HGMAAKMGL-IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
HGM K GL + V V+NA+ Y KC F+E++ K+F+ M ER++VSW +++ +S++
Sbjct: 394 HGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSL 453
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ M EEGF P+ T +VL
Sbjct: 454 GEEALATFCLMR--EEGFAPNQFTFSSVL 480
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 109/208 (52%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ A K ++ G+ VH +V +N + YS CGF D R+VFD ++ R
Sbjct: 377 VFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEER 436
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W LV+ ++++ L + L+ F L + P+ FTF V+ +C + + +G V
Sbjct: 437 DIVSWTTLVTAYSQSSLGEEALATFC-LMREEGFAPNQFTFSSVLISCASLCFLEYGRQV 495
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ K GL + + +ALI MY KC + E K+F+ + ++VSW +II G++++G
Sbjct: 496 HGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLV 555
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M G + +T++ VL
Sbjct: 556 EDALQLFRRME--LSGIKANAVTLLCVL 581
>gi|357486633|ref|XP_003613604.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514939|gb|AES96562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D ++T L+T YS CG + S +VF++L+ +N+ +NA +SG +N + V +F +++
Sbjct: 170 DVYVSTSLVTAYSKCGVLVSSNKVFENLRVKNVVTYNAFMSGLLQNGFHRVVFDVFKDMT 229
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ E KP+ T V+ AC ++++ G VHG++ K+ V V +L+ MY KC
Sbjct: 230 MNLEEKPNKVTLVSVVSACATLSNIRLGKQVHGLSMKLEACDHVMVVTSLVDMYSKCGCW 289
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
+F +RNL++WNS+I G N S + +L +M+ +EG +PD T
Sbjct: 290 GSAFDVFSRSEKRNLITWNSMIAGMMMNSESERAVELFERMV--DEGILPDSAT 341
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 43/246 (17%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC +I +GK+VH L S + + ++ T L+ MYS CG + VF + R
Sbjct: 244 VVSACATLSNIRLGKQVHGL-SMKLEACDHVMVVTSLVDMYSKCGCWGSAFDVFSRSEKR 302
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTF------------------- 203
NL WN++++G N + +F E D + PD+ T+
Sbjct: 303 NLITWNSMIAGMMMNSESERAVELF-ERMVDEGILPDSATWNSLISGFAQKGVCVEAFKY 361
Query: 204 ----------PCV------IKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
PC+ + CG + +HG A ++ + D F++ AL+ Y K
Sbjct: 362 FSKMQCAGVAPCLKILTSLLSVCGDSCVLRSAKAIHGYALRICVDKDDFLATALVDTYMK 421
Query: 248 C---AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVI 304
C +F + F+V P+ + WN++I G+ NG +F++ +M+ +E P+
Sbjct: 422 CGCVSFARFVFDQFDVKPD-DPAFWNAMIGGYGTNGDYESAFEVFYEML--DEMVQPNSA 478
Query: 305 TVVTVL 310
T V+VL
Sbjct: 479 TFVSVL 484
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 120 HELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNEL 179
H ST + NTR Y+L +FD + + +NA++SG ++N
Sbjct: 67 HSHPHTSTALIASYAANTRSF-HYAL--------ELFDEMPQPTITAFNAVLSGLSRNGP 117
Query: 180 YTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSN 239
+ +F ++ ++P++ T ++ A + + VH +A K+G+ DV+VS
Sbjct: 118 RGQAVWLFRQIGF-WNIRPNSVTIVSLLSA-RDVKNQSHVQQVHCLACKLGVEYDVYVST 175
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM-MGCEEG 298
+L+ Y KC + K+FE + +N+V++N+ + G +NGF FD+ M M EE
Sbjct: 176 SLVTAYSKCGVLVSSNKVFENLRVKNVVTYNAFMSGLLQNGFHRVVFDVFKDMTMNLEEK 235
Query: 299 FIPDVITVVTVL 310
P+ +T+V+V+
Sbjct: 236 --PNKVTLVSVV 245
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD--SLK 160
LL CG + K +H +DF+ T L+ Y CG +R VFD +K
Sbjct: 380 LLSVCGDSCVLRSAKAIHGYALRICVDKDDFLA-TALVDTYMKCGCVSFARFVFDQFDVK 438
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ WNA++ G+ N Y +F E+ D ++P++ TF V+ AC + G
Sbjct: 439 PDDPAFWNAMIGGYGTNGDYESAFEVFYEM-LDEMVQPNSATFVSVLSACSHSGQIERGL 497
Query: 221 GVHGMAAKMGL 231
M K GL
Sbjct: 498 RFFRMIRKYGL 508
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 114/207 (55%), Gaps = 6/207 (2%)
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNL 164
+ACG + ++GK VH L + T + D + + L+ MY+ CG D+R +FD + RN+
Sbjct: 134 KACGFLRRSDVGKSVHCL-AVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNV 192
Query: 165 FQWNALVSGFTKNELYTDVLSIFVE-LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
W+ ++ G+ + + + L++F + L D ++ ++FTF VI+ C + G +H
Sbjct: 193 VSWSGMIYGYAQLDDGVEALTLFKQALIEDVDV--NDFTFSSVIRVCSSSTFLELGKLIH 250
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G+ KM FV +ALI++Y KC +E ++F+ +P RNL WNS++ +++ +
Sbjct: 251 GLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQ 310
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
F L +M G P+ I+ ++VL
Sbjct: 311 RVFGLFEEMGNV--GMKPNFISFLSVL 335
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 7/170 (4%)
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
+++ LI +YS PL S +VFD ++ W++++S F +NE L F + +D
Sbjct: 61 LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND 120
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
++PD+ +P KACG + G VH +A K G DVFV ++L+ MY KC + +
Sbjct: 121 G-VRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGD 179
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
LF+ MPERN+VSW+ +I G+++ E+ L ++ I DV
Sbjct: 180 ARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLF------KQALIEDV 223
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 97/197 (49%), Gaps = 5/197 (2%)
Query: 82 KALSLLQENL-HNADLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
+AL+L ++ L + D+ + T +++ C +E+GK +H L F + + + L
Sbjct: 210 EALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLC-LKMSFDSSSFVGSAL 268
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
I++YS CG + +VFD + TRNL WN+++ ++ V +F E+ + +KP+
Sbjct: 269 ISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMG-NVGMKPN 327
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
+F V+ AC V G + G+ + +L+ + G+ ++E V + +
Sbjct: 328 FISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIK 387
Query: 260 VMPERNLVS-WNSIICG 275
MP R S W +++ G
Sbjct: 388 QMPMRPTESVWGALLTG 404
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G +H K GL VS+ LI +Y K +++F+ P+++ +W+S+I F++
Sbjct: 44 GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ 103
Query: 279 NGFSCESFDLLIKMMGCEEGFIPD 302
N + +M+ +G PD
Sbjct: 104 NEAPLLALQFFRRML--NDGVRPD 125
>gi|414888053|tpg|DAA64067.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 754
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 125/244 (51%), Gaps = 14/244 (5%)
Query: 72 TLCEESKSLNKALSLLQENLHNADLKEAT---GVLLQACGHEKDIEIGKRVHELVSASTQ 128
T+ + + AL+ L D++ V L + + +++H LVS +
Sbjct: 129 TILSATPDPDDALAFAARMLRAGDVRPDAITFTVTLSLAAGRGEGRLVRQLHALVSRAGI 188
Query: 129 FSNDFIINTRLITMYSLCGFPLDS-RRVFDSLKTRNLFQWNALVSGFTKN-ELYTDVLSI 186
++ F+ N L+T Y+ G LD+ R+VF+ + R+L WNALV G ++ E +V+ +
Sbjct: 189 AADVFVGNA-LVTAYAR-GASLDAARKVFEEMPARDLVSWNALVCGLAQDGECPAEVIRV 246
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
F+ + ++PD + VI ACGG + G +HG A K+G+ G V ++N L+AMY
Sbjct: 247 FLRMLKHGGVRPDRISVCSVISACGGEGKLELGRQIHGFAVKLGIEGHVSIANVLVAMYY 306
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
KC +LFE M ER++VSW +++ E+ S L MM +G P+ +T
Sbjct: 307 KCGTPGCARRLFEFMGERDVVSWTTVMSMDREDAVS-----LFNGMM--RDGVAPNEVTF 359
Query: 307 VTVL 310
V +L
Sbjct: 360 VAIL 363
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 10/211 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ ACG E +E+G+++H + I L+ MY CG P +RR+F+ + R
Sbjct: 266 VISACGGEGKLELGRQIHGF-AVKLGIEGHVSIANVLVAMYYKCGTPGCARRLFEFMGER 324
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W ++S + D +S+F + D + P+ TF ++ A G G V
Sbjct: 325 DVVSWTTVMSMDRE-----DAVSLFNGMMRDG-VAPNEVTFVAILSAMPGHCPAREGQMV 378
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF- 281
H + K GL +N+ I MY K +++ +F +MP +++WN++I G+++N
Sbjct: 379 HAVCIKTGLSDKPAAANSFITMYAKLRRMDDAKMIFGLMPHPEVIAWNALISGYAQNEMC 438
Query: 282 --SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+F ++K+ E +++ VT +
Sbjct: 439 QDALEAFLSMVKITKPSETTFASILSAVTAV 469
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 11/199 (5%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+ VH V T S+ ITMY+ D++ +F + + WNAL+SG+
Sbjct: 375 GQMVHA-VCIKTGLSDKPAAANSFITMYAKLRRMDDAKMIFGLMPHPEVIAWNALISGYA 433
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV--GFGSGVHGMAAKMGLIG 233
+NE+ D L F+ + T KP TF ++ A + V +G H K+GL
Sbjct: 434 QNEMCQDALEAFLSMVKIT--KPSETTFASILSAVTAVETVSMAYGQMYHCQTLKLGLGA 491
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
+VS ALI +Y K +EE K F R+L++W +II S++G ++D ++ +
Sbjct: 492 SEYVSGALIDLYAKRGSLEESWKAFGETVHRSLIAWTAIISANSKHG----NYDGVVSLF 547
Query: 294 G--CEEGFIPDVITVVTVL 310
G PD + +++VL
Sbjct: 548 NDMARSGVTPDGVVLLSVL 566
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 5/151 (3%)
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+R+ +N ++S + D L+ + +++PD TF + G +
Sbjct: 121 SRDTSSYNTILSATPDPD---DALAFAARMLRAGDVRPDAITFTVTLSLAAGRGEGRLVR 177
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H + ++ G+ DVFV NAL+ Y + A ++ K+FE MP R+LVSWN+++CG +++G
Sbjct: 178 QLHALVSRAGIAADVFVGNALVTAYARGASLDAARKVFEEMPARDLVSWNALVCGLAQDG 237
Query: 281 -FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E + ++M+ G PD I+V +V+
Sbjct: 238 ECPAEVIRVFLRMLK-HGGVRPDRISVCSVI 267
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 114/241 (47%), Gaps = 35/241 (14%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSND--FIINTRLITMYSLCGFPLDSRRVFDSL 159
+L AC + GK VH +++ F + +N L+T YS CG +RR+FD++
Sbjct: 300 VLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNM 359
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL----------------------- 196
+++ WN ++SG+ ++ + +F E+ EL
Sbjct: 360 TLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFN 419
Query: 197 -------KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
KP ++T+ I ACG + + G +HG ++G G NALI MY +C
Sbjct: 420 KMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCG 479
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
V+E +F VMP + VSWN++I ++G E+ +L +M+ EG PD I+ +TV
Sbjct: 480 AVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVA--EGIYPDRISFLTV 537
Query: 310 L 310
L
Sbjct: 538 L 538
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 5/154 (3%)
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE 189
+ D + T ++ Y G +R VF+ + + WNA++SG+ + + + +F
Sbjct: 225 NKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRR 284
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM--GLIGDVF--VSNALIAMY 245
+ + + D FTF V+ AC + G VHG ++ + + V+NAL+ Y
Sbjct: 285 MVLE-RVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFY 343
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
KC + ++F+ M +++VSWN+I+ G+ E+
Sbjct: 344 SKCGNIAVARRIFDNMTLKDVVSWNTILSGYVES 377
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 13/194 (6%)
Query: 100 TGVLLQACGHE----KDIEIGKRVHELVSASTQFSNDF--IINTRLITMYSLCGFPLDSR 153
T LL A H + I + +L +A+T F D + T L+ Y+ +
Sbjct: 49 TSALLHAPPHPHLTLRLIHLYTLSRDLPAAATLFCADPCPVSATSLVAAYAAADRLPAAV 108
Query: 154 RVFDSL--KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
FD++ R+ NA++S + + +++F L + L+PD+++F ++ A G
Sbjct: 109 SFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGG 168
Query: 212 GIADVGFG--SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE---EMVKLFEVMPERNL 266
+ ++ + +H K G G + V NAL+A+Y KC E + K+ + MP ++
Sbjct: 169 HLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDD 228
Query: 267 VSWNSIICGFSENG 280
++W +++ G+ G
Sbjct: 229 LTWTTMVVGYVRRG 242
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 91/159 (57%), Gaps = 2/159 (1%)
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
++VFD + R++ WN +++GF +N +Y + L + E+ + +LKPD+FT ++
Sbjct: 180 KKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAE 239
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
DV G +HG A + G GDVF+ ++LI MY KC +E ++ F ++P ++ +SWNSI
Sbjct: 240 HVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSI 299
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
I G +NG +M+ +E P ++ +V+P
Sbjct: 300 IAGCVQNGEFDRGLGFFRRML--KENVKPMAVSFSSVIP 336
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 114/232 (49%), Gaps = 7/232 (3%)
Query: 82 KALSLLQENLHNADLKEATGVL---LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
+AL +++E N LK + L L D+ GK +H + F D I +
Sbjct: 209 EALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGY-AVRNGFDGDVFIGSS 267
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI MY+ C S R F L ++ WN++++G +N + L F + + +KP
Sbjct: 268 LIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKEN-VKP 326
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+F VI AC + + G +HG ++G + F++++L+ MY KC ++ +F
Sbjct: 327 MAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVF 386
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + +R++V+W +II G + +G + ++ L M+ E+G P + + VL
Sbjct: 387 DRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENML--EDGVRPCYVAFMAVL 436
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 83/160 (51%), Gaps = 17/160 (10%)
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
W++++ +T + L S F + S + P+ FP ++KA + +H
Sbjct: 78 WSSIIKCYTSHSLLHLSFSSFNSMRS-LSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136
Query: 227 AKMGLIGDVFVSNALIAMYGKC---------------AFVEEMVKLFEVMPERNLVSWNS 271
++GL D++++NALI Y K + ++ + K+F++MP R++VSWN+
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+I GF++NG E+ D +++ MG PD T+ ++LP
Sbjct: 197 VIAGFAQNGMYVEALD-MVREMGKNGKLKPDSFTLSSILP 235
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 111/214 (51%), Gaps = 12/214 (5%)
Query: 102 VLLQACGHEKDIEIGKRV-----HELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
V+L AC D +GK++ H L + D + L+ MY CG P +R++F
Sbjct: 241 VVLSACSQLGDFTLGKKILAYMDHHLFDVHS----DVFLGNALLDMYLKCGQPHLARQLF 296
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
+ +NL WN+++SG L+ + L +F + + LKPD+ T V+ +C + D+
Sbjct: 297 HLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQT-MGLKPDSVTLVGVLNSCANLGDL 355
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G VH K + D +V+NAL+ MY KC +++ +F+ M +++ S+ ++I GF
Sbjct: 356 ELGKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGF 415
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +G + + + +M G PD +T+V VL
Sbjct: 416 AMHGKADRALAIFSEM--PRMGVRPDHVTLVGVL 447
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 9/210 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+AC ++H S T S++ + L+ Y++ GF +VFD
Sbjct: 144 LLKACSQSHAFIEALQIHAH-SIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHW 202
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L W L+ ++K ++ ++ F ++ D T V+ AC + D G +
Sbjct: 203 DLISWTTLIQAYSKMGYPSEAIAAFFRMNCTA----DRMTLVVVLSACSQLGDFTLGKKI 258
Query: 223 HGMAAK--MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+ DVF+ NAL+ MY KC +LF +MP +NLVSWNS+I G + G
Sbjct: 259 LAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQG 318
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + +M G PD +T+V VL
Sbjct: 319 LFKEALHMFRRMQTM--GLKPDSVTLVGVL 346
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 7/148 (4%)
Query: 164 LFQWNALVSGF-TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ +NA++ T N +T + S++ ++ L PD +T P ++KAC +
Sbjct: 102 VYIFNAIIQSLSTSNNTFTHIFSLYRQMLL-IGLSPDTYTLPYLLKACSQSHAFIEALQI 160
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + K GL ++FV N L+ Y F+E + K+F+ P +L+SW ++I +S+ G+
Sbjct: 161 HAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYP 220
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + M C D +T+V VL
Sbjct: 221 SEAIAAFFR-MNCT----ADRMTLVVVL 243
>gi|255562657|ref|XP_002522334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538412|gb|EEF40018.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 10/201 (4%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+ IGK +H + T +D ++ + L MY CG ++R +FD + R++ W A++
Sbjct: 229 LRIGKEIHGYI-MRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVNRDVVTWTAMID 287
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
+ ++ + +F EL + +KP++FTF V+ AC + G G VHG +
Sbjct: 288 RYFEDGRREEGFELFAELLR-SGIKPNDFTFAGVLNACADLGVEGIGKQVHGHMTRADFD 346
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES---FDLL 289
F ++AL+ MY KC + ++F MP+ +LVSW S+I G+++NG E+ F+LL
Sbjct: 347 PFSFAASALVHMYSKCGNMVNAERVFRGMPQPDLVSWTSLIAGYAQNGHPDEALQYFELL 406
Query: 290 IKMMGCEEGFIPDVITVVTVL 310
+K G PD IT V VL
Sbjct: 407 LK-----SGTRPDHITFVGVL 422
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 142/306 (46%), Gaps = 41/306 (13%)
Query: 36 NKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNAD 95
N S R+IFK S S + N F + I LCE+++ L +A+ +L N +
Sbjct: 26 NPLSHRTIFKLSSKDSFIDRLCNEG----RFKEAIALLCEQNR-LKEAIQVL--NQIDRP 78
Query: 96 LKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC--------- 146
L+Q+C + +E+GK+VH+ + S F +I+ RL+ MY+ C
Sbjct: 79 SPSIYSSLIQSCLKNRALEVGKKVHDHIKLSG-FIPGLVISNRLLDMYAKCNDLVDAQKL 137
Query: 147 ----------------------GFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVL 184
G ++R++FD++ R+ F W A++SG+ ++ + L
Sbjct: 138 FEEMGERDLCSWNVLISGCAKMGLLKEARKLFDTMPERDNFSWTAMISGYVRHNRPHEAL 197
Query: 185 SIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAM 244
++ + L + FT V+ A I + G +HG + GL D V +AL M
Sbjct: 198 ELYRLMKKCENLTSNKFTVSSVLAAAAAIPCLRIGKEIHGYIMRTGLDSDEVVWSALSDM 257
Query: 245 YGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVI 304
YGKC +EE +F+ M R++V+W ++I + E+G E F+L +++ G P+
Sbjct: 258 YGKCGSIEEARHIFDKMVNRDVVTWTAMIDRYFEDGRREEGFELFAELL--RSGIKPNDF 315
Query: 305 TVVTVL 310
T VL
Sbjct: 316 TFAGVL 321
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC IGK+VH ++ + F + L+ MYS CG +++ RVF +
Sbjct: 320 VLNACADLGVEGIGKQVHGHMTRA-DFDPFSFAASALVHMYSKCGNMVNAERVFRGMPQP 378
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGF 218
+L W +L++G+ +N + L F EL + +PD+ TF V+ AC G+ D G
Sbjct: 379 DLVSWTSLIAGYAQNGHPDEALQYF-ELLLKSGTRPDHITFVGVLSACAHAGLVDKGL 435
>gi|449450760|ref|XP_004143130.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
gi|449496662|ref|XP_004160192.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
Length = 547
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 116/210 (55%), Gaps = 8/210 (3%)
Query: 103 LLQACGHEKDIEIGKRVHE--LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
L++ CG +D+ G+ +H ++ S + ++ + I Y+ CG D+R +FD +
Sbjct: 34 LIETCGRNRDLNFGRSLHARLIIDGSARLTH---FAAKFIAFYAACGKIKDARILFDKIP 90
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
N +W L+ +++ Y + LS+F EL L+P + P V+KACG +++ G
Sbjct: 91 RTNPRRWIVLIGAYSRCGYYPEALSVFCELQRGG-LRPSEYIIPSVLKACGHLSEKTTGR 149
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H + K L D +V +ALI MY K VE+ ++FE M ++LV+ N+++ G++ +G
Sbjct: 150 KLHTLILKNSLESDAYVCSALIDMYAKSGEVEKARRVFESMAGKDLVALNAMVSGYAHHG 209
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ +L+ +M G P+++T T++
Sbjct: 210 LAEEALNLVEEMQVL--GIKPNLVTWNTLV 237
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 122/277 (44%), Gaps = 71/277 (25%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACGH + G+++H L+ ++ S+ ++ + LI MY+ G +RRVF+S+ +
Sbjct: 135 VLKACGHLSEKTTGRKLHTLILKNSLESDAYVCSA-LIDMYAKSGEVEKARRVFESMAGK 193
Query: 163 -----------------------------------NLFQWNALVSGFTK-------NEL- 179
NL WN LV+GF++ EL
Sbjct: 194 DLVALNAMVSGYAHHGLAEEALNLVEEMQVLGIKPNLVTWNTLVTGFSQIGEEEMVRELF 253
Query: 180 --------------YTDVLSIFVELSSDTE------------LKPDNFTFPCVIKACGGI 213
+T V+S FV+ + E P + T ++ AC +
Sbjct: 254 KEMEANGIEPDVVSWTSVISGFVQNFRNEEAFDTFRRMLNAGFHPTSATISSLLPACASV 313
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
+ G +HG + +G+ DV+V AL+ MY KC + E LF M ERN +WNS+I
Sbjct: 314 GNGRCGKEIHGHSLALGVEKDVYVRTALVDMYAKCGYFYEAKILFWRMSERNSATWNSMI 373
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G++ +G+ E+ +L +M +E + D +T +L
Sbjct: 374 FGYANHGYCNEAIELFHQMKDDDEKKL-DHLTFTAIL 409
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 90/181 (49%), Gaps = 5/181 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + GK +H S + D + T L+ MY+ CG+ +++ +F + R
Sbjct: 306 LLPACASVGNGRCGKEIHGH-SLALGVEKDVYVRTALVDMYAKCGYFYEAKILFWRMSER 364
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
N WN+++ G+ + + + +F ++ D E K D+ TF ++ AC G+ D+G S
Sbjct: 365 NSATWNSMIFGYANHGYCNEAIELFHQMKDDDEKKLDHLTFTAILTACAHAGLVDLG-RS 423
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSEN 279
M +K G++ V ++ ++G+ + E L + MP + +L W +++ ++
Sbjct: 424 LFQLMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYDLIKTMPVKPDLYVWGALLGACRKH 483
Query: 280 G 280
G
Sbjct: 484 G 484
>gi|9279602|dbj|BAB01060.1| unnamed protein product [Arabidopsis thaliana]
Length = 598
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 110/196 (56%), Gaps = 6/196 (3%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-TRNLFQWNALVSGFT 175
K+VH V ++ I +I+ Y+ CG D++RVFD L +++L WN++++GF
Sbjct: 223 KQVHAKV-LKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFA 281
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+ L D + F L S +E+K D++ F ++++C +A + G +H +A K G + +
Sbjct: 282 QKGLSEDAVKFFSYLRS-SEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNE 340
Query: 236 FVSNALIAMYGKCAFVEEMVKLF-EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
FV ++LI MY KC +E K F ++ + + V+WN++I G++++G S DL +M
Sbjct: 341 FVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQM-- 398
Query: 295 CEEGFIPDVITVVTVL 310
C + D +T +L
Sbjct: 399 CNQNVKLDHVTFTAIL 414
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 1/148 (0%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
+D ++ R++ Y GF + +FD + R+ WN ++SG+T D +F +
Sbjct: 33 SDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCM 92
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
D ++F ++K + G VHG+ K G +V+V ++L+ MY KC
Sbjct: 93 KRSGS-DVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCER 151
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSE 278
VE+ + F+ + E N VSWN++I GF +
Sbjct: 152 VEDAFEAFKEISEPNSVSWNALIAGFVQ 179
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 2/181 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ K ++G++VH LV N ++ + L+ MY+ C D+ F +
Sbjct: 107 LLKGIASVKRFDLGEQVHGLVIKGGYECNVYV-GSSLVDMYAKCERVEDAFEAFKEISEP 165
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WNAL++GF + + + + D TF ++ V
Sbjct: 166 NSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQV 225
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM-PERNLVSWNSIICGFSENGF 281
H K+GL ++ + NA+I+ Y C V + ++F+ + ++L+SWNS+I GF++ G
Sbjct: 226 HAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFAQKGL 285
Query: 282 S 282
S
Sbjct: 286 S 286
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 86/172 (50%), Gaps = 16/172 (9%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A LL++C +++G+++H L + S SN+F+I++ LI MYS CG +R+ F
Sbjct: 307 AFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISS-LIVMYSKCGIIESARKCFQQ 365
Query: 159 LKTRN-LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG------ 211
+ +++ WNA++ G+ ++ L L +F ++ + +K D+ TF ++ AC
Sbjct: 366 ISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQM-CNQNVKLDHVTFTAILTACSHTGLIQ 424
Query: 212 -GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
G+ + V+ + +M A + + G+ V + +L E MP
Sbjct: 425 EGLELLNLMEPVYKIQPRMEHYA------AAVDLLGRAGLVNKAKELIESMP 470
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H A K G I D++VSN ++ Y K F+ LF+ MP+R+ VSWN++I G++ G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
>gi|326507168|dbj|BAJ95661.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 122/232 (52%), Gaps = 6/232 (2%)
Query: 81 NKALSLLQENLHNADLKEATGVL--LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
NKAL + + + +L L AC +++GK H L+ + F + + +
Sbjct: 178 NKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALL-VTNGFEINCYMGSS 236
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI+MY+ CG D+RR+FD + RN W +++SG+T+ + + +F ++ +K
Sbjct: 237 LISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQI-AGVKV 295
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D+ T V+ +CG + + G VH GL D+ V N+LI MY KC +++ +F
Sbjct: 296 DDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDIF 355
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
M +R+ SW ++I GF+ NG S E+ DL +M E G +P+ IT + VL
Sbjct: 356 CGMVKRDNFSW-TVIMGFAANGLSGEALDLFAQMEE-EGGVMPNEITFLGVL 405
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 4/182 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK--TRNLFQWNAL 170
+ +G ++H L S+ F++NT LI MYS C +P +R V DS + WN +
Sbjct: 109 VVVGAQLHALSVKLGLSSDTFVLNT-LINMYSSCSYPSTARSVLDSAPKGASDTVSWNTI 167
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
++G+ L L F +++ ++ D+ T + AC + G H + G
Sbjct: 168 IAGYIHAGLPNKALQAFSQMAKG-QVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNG 226
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
+ ++ ++LI+MY KC VE+ ++F+ MP+RN V W S+I G+++ G S E+ L
Sbjct: 227 FEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFR 286
Query: 291 KM 292
M
Sbjct: 287 DM 288
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 81/174 (46%), Gaps = 6/174 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ +CG +++G+ VH D + LI MYS CG + +F + R
Sbjct: 303 VVSSCGQMGALDLGRYVHAYCDIH-GLGKDISVKNSLIDMYSKCGDIKKAYDIFCGMVKR 361
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
+ F W ++ GF N L + L +F ++ + + P+ TF V+ +C GG+ + G+
Sbjct: 362 DNFSWTVIM-GFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGLVEQGY-R 419
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
H M++ G+ + ++ + G+ + E + + MP + V W S++
Sbjct: 420 HFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMWRSLL 473
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 107/211 (50%), Gaps = 4/211 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS--LK 160
LLQ C + K+VH + LI Y+ G P +S +F
Sbjct: 40 LLQLCTLCDTLSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVAY 99
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+R+ F WN L+ + ++ D + + +KPD T+P V+K C +V G
Sbjct: 100 SRSAFLWNTLIRANSIAGVF-DGFGTYNTMVR-AGVKPDECTYPFVLKVCSDFVEVRKGR 157
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VHG+A K+G GDVFV N L+A YG C + +K+F+ MPER+ VSWN++I S +G
Sbjct: 158 EVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHG 217
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
F E+ M+ + G PD++TVV+VLP
Sbjct: 218 FYEEALGFFRVMVAAKPGIQPDLVTVVSVLP 248
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 3/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C +D + + VH + L+ +Y CG S++VFD + R
Sbjct: 246 VLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDER 305
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WNA+++ F+ Y D L +F L D ++P++ T ++ G + G V
Sbjct: 306 NVISWNAIITSFSFRGKYMDALDVF-RLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEV 364
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + KM + DVF+SN+LI MY K +F M RN+VSWN++I F+ N
Sbjct: 365 HGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLE 424
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ +L+ +M +G P+ +T VLP
Sbjct: 425 YEAVELVRQMQA--KGETPNNVTFTNVLP 451
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 110/211 (52%), Gaps = 5/211 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C ++ G+ VH V+ F D + L+ Y CG D+ +VFD + R
Sbjct: 143 VLKVCSDFVEVRKGREVHG-VAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPER 201
Query: 163 NLFQWNALVSGFTKNELYTDVLSIF-VELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+ WN ++ + + Y + L F V +++ ++PD T V+ C D
Sbjct: 202 DKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARI 261
Query: 222 VHGMAAKMGLI-GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH A K+GL+ G V V NAL+ +YGKC + K+F+ + ERN++SWN+II FS G
Sbjct: 262 VHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRG 321
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ D+ M+ +EG P+ +T+ ++LP
Sbjct: 322 KYMDALDVFRLMI--DEGMRPNSVTISSMLP 350
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L G ++G VH S +D I+ LI MY+ G + +F+ + R
Sbjct: 348 MLPVLGELGLFKLGMEVHGF-SLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVR 406
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WNA+++ F +N L + + + ++ + E P+N TF V+ AC + + G +
Sbjct: 407 NIVSWNAMIANFARNRLEYEAVELVRQMQAKGE-TPNNVTFTNVLPACARLGFLNVGKEI 465
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H ++G D+FVSNAL MY KC + +F + R+ VS+N +I G+S S
Sbjct: 466 HARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFNI-SVRDEVSYNILIIGYSRTNDS 524
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
ES L +M G PD+++ + V+
Sbjct: 525 LESLRLFSEMRLL--GMRPDIVSFMGVV 550
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 105/208 (50%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + +GK +H + S D ++ L MYS CG ++ VF+ + R
Sbjct: 449 VLPACARLGFLNVGKEIHARI-IRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN-ISVR 506
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ +N L+ G+++ + L +F E+ ++PD +F V+ AC +A + G +
Sbjct: 507 DEVSYNILIIGYSRTNDSLESLRLFSEMRL-LGMRPDIVSFMGVVSACANLAFIRQGKEI 565
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ + +FV+N+L+ +Y +C ++ K+F + +++ SWN++I G+ G
Sbjct: 566 HGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGEL 625
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L M E+G D ++ V VL
Sbjct: 626 DTAINLFEAMK--EDGVEYDSVSFVAVL 651
>gi|302757275|ref|XP_002962061.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
gi|300170720|gb|EFJ37321.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
Length = 847
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 113/216 (52%), Gaps = 12/216 (5%)
Query: 103 LLQACGHE---KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
LL +C H KD+ G+++H + ST + D ++ T L+ MY CG D++ VFD +
Sbjct: 314 LLFSCSHAGLIKDLARGRKIHAEILKSTAAAGDVVVATALVNMYGRCGSVSDAKTVFDEM 373
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE-LKPDNFTFPCVIKACGGIADVGF 218
+ RN+ WNA++ ++ N+ + L F + + E +KPD TF ACG + D+
Sbjct: 374 QHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAADACGMMGDLSR 433
Query: 219 GSGVHGMAAKMGLIG--DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
+H ++ DV + +ALI MYG C + + ++ + MP N++SW S+I
Sbjct: 434 AVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRRLADAAQVLDQMPRTNVISWTSMILAC 493
Query: 277 SENGFSCESFDLLIKMMGCEE--GFIPDVITVVTVL 310
+N E + I++ + G PD +T+VTV+
Sbjct: 494 EQN----EDNEAAIRVYRAMQLHGHKPDPVTMVTVI 525
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 116/243 (47%), Gaps = 10/243 (4%)
Query: 74 CEESKSLNKALSLLQE-NLHNADLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSN 131
CE+++ A+ + + LH T V +++A + D++ G H +A+ F+
Sbjct: 493 CEQNEDNEAAIRVYRAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIEFHAQ-AAAFGFAT 551
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSL---KTRNLFQWNALVSGFTKNELYTDVLSIFV 188
++ L+T+Y G + VF L ++ WN+++S + +N L L F
Sbjct: 552 STVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNGLPNQALGTFQ 611
Query: 189 ELSSDTELKPDNFTFPCVIKACGGI-ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+ PD TF ++ AC G + + G +H +AA GL D+ V+N L+ MY +
Sbjct: 612 RMLHHGR-HPDKTTFVNILNACAGDPSKLLQGVKIHALAAACGLDSDIDVANTLLHMYSR 670
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
C + K+F + ++N+VSW+++ + NG + + M+ G P+ +T +
Sbjct: 671 CGNLSRARKVFHALTQKNVVSWSAMAAACAHNGDADGALQAFRGML--HGGIQPNAVTFI 728
Query: 308 TVL 310
++L
Sbjct: 729 SIL 731
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 107/218 (49%), Gaps = 14/218 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ G K+++ G+ VH + S + ++ N LI MY C D+ VF ++ +
Sbjct: 1 MLKLHGDAKNLDAGRAVHLQMITSGYHRDRYLCNL-LIQMYGRCRSVHDAIAVFHTVSRK 59
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGS 220
N+F W L+ T N L+ + + +F E+ ++ D FTF +++AC G+A + G
Sbjct: 60 NVFTWTILIVAHTHNGLFFEAVELFREMDVHG-VQSDEFTFSAILEACSNLGLAFLSLGK 118
Query: 221 GVHGMAAKMGLI----GDVFVSNALIAMYGKCAFVEEMVKLFEVMP----ERNLVSWNSI 272
+H + GL V S A+I Y + +E+ ++FE M + +L++W ++
Sbjct: 119 TIHSRIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQVLDPDLIAWTAM 178
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +++ G + E+ L KM +G PD V +
Sbjct: 179 MTAYNQLGHAREALLLFRKM--DLQGLEPDRFAFVAAI 214
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 117/240 (48%), Gaps = 14/240 (5%)
Query: 82 KALSLLQE-NLHNADLKEAT-GVLLQACGHE--KDIEIGKRVHELVSAS--TQFSNDFII 135
+A+ L +E ++H E T +L+AC + + +GK +H + SN +I
Sbjct: 79 EAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGKTIHSRIHQQGLKLTSNPTVI 138
Query: 136 -NTRLITMYSLCGFPLDSRRVFDSLKTR----NLFQWNALVSGFTKNELYTDVLSIFVEL 190
+T +I Y+ G + +F+ ++ + +L W A+++ + + + L +F ++
Sbjct: 139 CSTAMIDAYAQNGHIEQAAEIFERMQLQVLDPDLIAWTAMMTAYNQLGHAREALLLFRKM 198
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
L+PD F F I AC I + G+ +H + D V NAL+ Y K
Sbjct: 199 DLQG-LEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECDGVVGNALLNFYAKAGL 257
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
V E LF M +N+V+W++I+ +++NG + +L +M+ +G P+ +T V++L
Sbjct: 258 VHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREML--LDGVAPNKVTFVSLL 315
>gi|297806919|ref|XP_002871343.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317180|gb|EFH47602.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 104/182 (57%), Gaps = 3/182 (1%)
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE 189
+ D + +IT Y G + +FDS+ +N+ W ++SGF++N Y++ L++F+
Sbjct: 145 NRDVPVWNAMITGYQRRGDMKAAMELFDSMPNKNVTSWTTVISGFSQNGNYSEALTMFLC 204
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
+ D +KP++ T V+ AC + ++ G + G A + G +++V NA + MY KC
Sbjct: 205 MEKDKSVKPNHITLVSVLPACANLGELEIGRRLEGYARENGFFDNIYVRNATLEMYSKCG 264
Query: 250 FVEEMVKLF-EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
++ +LF E+ +RNL+SWNS+I + +G E+ +L +M+ +EG PD +T V
Sbjct: 265 MIDVAKRLFDEIGNQRNLISWNSMIGSLATHGKHDEALELYAQML--QEGERPDAVTFVG 322
Query: 309 VL 310
+L
Sbjct: 323 LL 324
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 19/188 (10%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL-KT 161
+L AC + ++EIG+R+ + F N ++ N L MYS CG ++R+FD +
Sbjct: 221 VLPACANLGELEIGRRLEGYARENGFFDNIYVRNATL-EMYSKCGMIDVAKRLFDEIGNQ 279
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFG 219
RNL WN+++ + + + L ++ ++ + E +PD TF ++ AC GG+ G
Sbjct: 280 RNLISWNSMIGSLATHGKHDEALELYAQMLQEGE-RPDAVTFVGLLLACVHGGMVLKGKE 338
Query: 220 -----SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSII 273
VH ++ K+ G +I + G+ ++E L + MP + + V W +++
Sbjct: 339 LLKSMEEVHKISPKLEHYG------CMIDLLGRVGKLQEACDLIKTMPMKPDAVVWGTLL 392
Query: 274 --CGFSEN 279
C F N
Sbjct: 393 GACSFHGN 400
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+R++FD + +F +N L+ ++ + + + ++ LS D ++P++ TF + A
Sbjct: 35 ARKLFDLHRNPCIFLYNKLIQSYSVHHQPHESIVLYNLLSFDG-IRPNHHTFNFIFAASA 93
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
+ +H + G D F ALI Y K + ++F+ M R++ WN+
Sbjct: 94 SFSSARPLRLLHSQFFRSGFESDSFCCTALITAYAKLGALCCARRVFDEMSNRDVPVWNA 153
Query: 272 IICGFSENG 280
+I G+ G
Sbjct: 154 MITGYQRRG 162
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 107/200 (53%), Gaps = 11/200 (5%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+++C D+ GK++H+ + + +D + + LI MYS CG+ D+R++FD + RN
Sbjct: 93 IKSCSSLYDLCAGKQIHQQ-AFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERN 151
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVE--LSSDTELKP--------DNFTFPCVIKACGGI 213
+ W +++SG+ +NE + + +F E L +T+ D+ CVI AC +
Sbjct: 152 VVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARV 211
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
VHG+A K G G + V N L+ Y KC + K+F+ M E ++ SWNS+I
Sbjct: 212 CVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLI 271
Query: 274 CGFSENGFSCESFDLLIKMM 293
+++NG S E+F L M+
Sbjct: 272 AVYAQNGLSVEAFSLFSDMV 291
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 3/211 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G ++ AC + + VH L + F + L+ Y+ CG SR+VFD ++
Sbjct: 202 GCVISACARVCVKSVTECVHGL-AVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGME 260
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
++ WN+L++ + +N L + S+F ++ E++ + T V+ AC + G
Sbjct: 261 ETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGK 320
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H KM L ++ V +++ MY KC VE K F+ + +N+ SW ++ G+ +G
Sbjct: 321 CIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHG 380
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ + +M+ C G P+ IT V+VL
Sbjct: 381 HGKEAMKVFYEMIRC--GIKPNYITFVSVLA 409
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+++ WN++++ F ++ L F + L P+ TFPC IK+C + D+ G +
Sbjct: 50 SVYSWNSIIADFARSGDSLQALYAFSSMRK-LSLHPNRSTFPCTIKSCSSLYDLCAGKQI 108
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
H A G D+FV++ALI MY KC ++ + KLF+ +PERN+VSW S+I G+ +N
Sbjct: 109 HQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQN 165
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 138/286 (48%), Gaps = 16/286 (5%)
Query: 40 LRSIFKEKSSLSLSAKTNNASTQGLHFL-QEITTLCEESKSLNKALS-LLQENLHNADLK 97
++ + E + L L+A+ + ++ + + FL + LC S A S +L ++L D +
Sbjct: 304 VQRMLSEGAVLKLTARRSKSNMRNVEFLFKNRIKLCAGSSESQTATSFILSDSLTEEDSR 363
Query: 98 EATGVLLQ--------ACGHEK-----DIEIGKRVHELVSASTQFSNDFIINTRLITMYS 144
VLL C +K + G + + T+ + I + LI MY
Sbjct: 364 VLEFVLLTNRNSSWAWVCNIDKLAFYIRVSFGPDYTDDPESETKPWLNLITSNYLIDMYC 423
Query: 145 LCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFP 204
C PL + +VFDS+ RN+ W+AL+SG N LS+F E+ + P+ FTF
Sbjct: 424 KCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQG-IYPNEFTFS 482
Query: 205 CVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
+KACG + + G +HG K+G V V N+L+ MY KC + E K+F + +R
Sbjct: 483 TNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDR 542
Query: 265 NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+L+SWN++I GF G+ ++ D M PD T+ ++L
Sbjct: 543 SLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLL 588
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL+AC I GK++H LV + + I L+ +Y CG+ +R+ FD +K
Sbjct: 587 LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE 646
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+ + W++L+ G+ + + + + +F L + + D+F +I A + G
Sbjct: 647 KTMISWSSLILGYAQEGEFVEAMGLFKRLQ-ELNSQIDSFALSSIIGVFADFALLRQGKQ 705
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+ +A K+ + V N+++ MY KC V+E K F M ++++SW +I G+ ++G
Sbjct: 706 MQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGL 765
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+S + +M+ PD + + VL
Sbjct: 766 GKKSVRIFYEML--RHNIEPDEVCYLAVL 792
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 98/187 (52%), Gaps = 1/187 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ CG D +GK++H L D + T L+ MY +D R+VF+++ R
Sbjct: 109 VLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKR 168
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W +L++G+ ++ +DV+ +F + ++ + P++ TF V+ V G V
Sbjct: 169 NVVTWTSLLTGYIQDGALSDVMELFFRMRAEG-VWPNSVTFASVLSVVASQGMVDLGRRV 227
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + K G VFV N+L+ MY KC VEE +F M R++VSWN+++ G NG
Sbjct: 228 HAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHD 287
Query: 283 CESFDLL 289
E+ L
Sbjct: 288 LEALQLF 294
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 99/185 (53%), Gaps = 4/185 (2%)
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
T + I+ T L+ YS ++ +F + +++ W+A+++ + + +I
Sbjct: 433 TNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNI 492
Query: 187 FVELSSDTELKPDNFTFPCVIKACGG-IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
F++++ LKP+ FT VI AC A V G H ++ K + VS+AL++MY
Sbjct: 493 FIKMTMHG-LKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMY 551
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
+ +E +FE +R+LVSWNS++ G++++G+S ++ D+ +M EG D +T
Sbjct: 552 ARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEA--EGIEMDGVT 609
Query: 306 VVTVL 310
++V+
Sbjct: 610 FLSVI 614
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 11/202 (5%)
Query: 113 IEIGKRVHELVSASTQF---SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNA 169
+++G+RVH + S +F S F+ N+ L+ MY+ CG ++R VF ++TR++ WN
Sbjct: 221 VDLGRRVH---AQSVKFGCCSTVFVCNS-LMNMYAKCGLVEEARVVFCGMETRDMVSWNT 276
Query: 170 LVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM 229
L++G N + L +F + S + + T+ VIK C I +G +H K
Sbjct: 277 LMAGLVLNGHDLEALQLFHDSRSSITMLTQS-TYATVIKLCANIKQLGLARQLHSSVLKR 335
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENGFSCESFDL 288
G V AL+ Y K + + +F +M +N+VSW ++I G +NG + L
Sbjct: 336 GFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAAL 395
Query: 289 LIKMMGCEEGFIPDVITVVTVL 310
+M E+G P+ T T+L
Sbjct: 396 FSRMR--EDGVAPNDFTYSTIL 415
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 15/176 (8%)
Query: 146 CGFPLD----------SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
C PL+ +R+ FD + RN +AL + ++ L F+++
Sbjct: 41 CSVPLENQTNLNDATGARQAFDEIPHRNTLD-HALFDHARRGSVH-QALDHFLDVHRCHG 98
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL-IGDVFVSNALIAMYGKCAFVEEM 254
+ V+K CG + D G +HG+ + G GDV V +L+ MY K V +
Sbjct: 99 GRVGGGALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDG 158
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+FE MP+RN+V+W S++ G+ ++G + +L +M EG P+ +T +VL
Sbjct: 159 RKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRA--EGVWPNSVTFASVL 212
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 103/209 (49%), Gaps = 9/209 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-T 161
+++ C + K + + +++H V F + + T L+ YS G ++ +F + +
Sbjct: 312 VIKLCANIKQLGLARQLHSSV-LKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGS 370
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N+ W A+++G +N ++F + D + P++FT+ ++ A +
Sbjct: 371 QNVVSWTAMINGCIQNGDVPLAAALFSRMREDG-VAPNDFTYSTILTA----SVASLPPQ 425
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K V AL+A Y K EE + +F+++ ++++VSW++++ +++ G
Sbjct: 426 IHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGD 485
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S + ++ IKM G P+ T+ +V+
Sbjct: 486 SDGATNIFIKMT--MHGLKPNEFTISSVI 512
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 80/164 (48%), Gaps = 6/164 (3%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+++G++ H +S + + +++ L++MY+ G ++ +F+ R+L WN+++S
Sbjct: 522 VDLGRQFHA-ISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLS 580
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV-HGMAAKMGL 231
G+ ++ L +F ++ ++ ++ D TF VI C V G MA G+
Sbjct: 581 GYAQHGYSQKALDVFRQMEAEG-IEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGI 639
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVM--PERNLVSWNSII 273
+ ++ +Y + ++E + L E M P +V W +++
Sbjct: 640 TPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMV-WRTLL 682
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
+VFD + RN+F WN L+ G+ KN L+++ L F + + + P++FT V+ AC +
Sbjct: 259 KVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRL 318
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
+ G VH A +G G++FV N LI MY KC +E V +F + ++++SWN+II
Sbjct: 319 GALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTII 378
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + +G + ++ + +M EG PD +T V +L
Sbjct: 379 NGLAIHGHAPDALGMFDRMKS--EGEEPDGVTFVGIL 413
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 91/174 (52%), Gaps = 5/174 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL++C K+ E ++ + NDF+ IT S +R++FD +
Sbjct: 18 LLRSC---KNYERLHQIQAQIVTHGLEHNDFVA-PNFITTCSRFKRIHHARKLFDKIPQP 73
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WNA+ G+ +N + D + +F EL+ + P+ FTFP +IK+CG + V G V
Sbjct: 74 NTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGM-PNCFTFPMIIKSCGKLEGVREGEEV 132
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
H A K G + FV+ +LI MY K VE+ K+F M ERN+V W +II G+
Sbjct: 133 HCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGY 186
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 27/217 (12%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+++++CG + + G+ VH + SN F+ T LI MYS G D+ +VF +
Sbjct: 115 MIIKSCGKLEGVREGEEVHCCATKHGFKSNSFVA-TSLIDMYSKKGCVEDAYKVFGEMHE 173
Query: 162 RNLFQWNALVSGFTKNELYTDVLS---IFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
RN+ W A+++G+ L DV+S +F +L P+ + G I
Sbjct: 174 RNVVVWTAIINGYI---LCGDVVSGRRLF-------DLAPERDVVMWSVLISGYIES--- 220
Query: 219 GSGVHGMAAKMGLIG-----DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
MAA L D NA++ Y VE K+F+ MPERN+ SWN +I
Sbjct: 221 ----KNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLI 276
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G+ +NG E+ + +M+ E IP+ T+V VL
Sbjct: 277 GGYVKNGLFSETLESFKRML-VEGHVIPNDFTLVAVL 312
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 83/174 (47%), Gaps = 6/174 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +++GK VH + + S + + + LI MY+ CG ++ VF+ L +
Sbjct: 311 VLSACSRLGALDMGKWVH-VYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRK 369
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGS 220
++ WN +++G + D L +F + S+ E +PD TF ++ AC G+ GF
Sbjct: 370 DIISWNTIINGLAIHGHAPDALGMFDRMKSEGE-EPDGVTFVGILSACTHMGLVKDGFLY 428
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
M ++ + ++ + G+ +++ + MP E + V W +++
Sbjct: 429 -FKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALL 481
>gi|115477555|ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|50725675|dbj|BAD33141.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113624342|dbj|BAF24287.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|215697775|dbj|BAG91968.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 581
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 124/232 (53%), Gaps = 5/232 (2%)
Query: 81 NKAL-SLLQENLHNADLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
NKAL S Q L E T + +L AC +++G H LV + F + I +
Sbjct: 178 NKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNG-FEINCYIGSS 236
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L++MY+ CG ++RRVF+ + RN+ W ++++G T++ + + + +F ++ +K
Sbjct: 237 LVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQI-AGVKA 295
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D+ T V+ +CG + + G +H GL ++ V N+LI MY KC V + ++F
Sbjct: 296 DDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIF 355
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +R++ +W +I GF+ NG E+ DL +M G E+ +P+ + + VL
Sbjct: 356 HGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEG-EDKVMPNEVIFLGVL 406
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 108/211 (51%), Gaps = 6/211 (2%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK- 160
+ + A +++G + H L + S+ F++N LI MYS C +P +R V DS
Sbjct: 98 IAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNA-LINMYSSCNYPASARLVLDSAPR 156
Query: 161 -TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
++ WN +++G+ + + L F +++ + +++ D T V+ AC + G
Sbjct: 157 WASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKE-QVRLDEVTLLNVLVACARTGAMKVG 215
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
S H + G + ++ ++L++MY KC VEE ++F MPERN+V W S+I G +++
Sbjct: 216 SLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQS 275
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ DL M G D T+ TV+
Sbjct: 276 GRFKEAVDLFRDMQ--IAGVKADDATIATVV 304
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 96/205 (46%), Gaps = 7/205 (3%)
Query: 74 CEESKSLNKALSLLQE-NLHNADLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSN 131
C +S +A+ L ++ + +AT ++ +CG +++G+ +H
Sbjct: 272 CTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHG-LGK 330
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ + LI MYS CG + ++F L R++F W ++ GF N L + L +F ++
Sbjct: 331 ELSVKNSLIDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQME 390
Query: 192 SDTELKPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
+ ++ P+ F V+ AC GG+ + G+ H M+ L+ + ++ + G+
Sbjct: 391 GEDKVMPNEVIFLGVLTACSHGGLVEQGY-HHFHRMSKVYNLVPRIEHYGCMVDLLGRAK 449
Query: 250 FVEEMVKLFEVMP-ERNLVSWNSII 273
+ E + + MP ++V W S++
Sbjct: 450 LLAEAEQFIKDMPVAPDVVVWRSLL 474
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
DN++ I A + + GS H ++ K+ L D FV NALI MY C + +
Sbjct: 92 DNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVL 151
Query: 259 EVMPE--RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ P ++VSWN+II G+ G ++ +M +E D +T++ VL
Sbjct: 152 DSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQM--AKEQVRLDEVTLLNVL 203
>gi|255562850|ref|XP_002522430.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538315|gb|EEF39922.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 556
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 119/210 (56%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+ L+AC + ++ G+++H + ++ F+ NT L TMY+ CG R+F+ +
Sbjct: 220 AIALKACANLGALDHGRQIHCQALKRSLEASSFVANT-LATMYNKCGKLDYGSRLFEKMT 278
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN+ W +++ +T++ + L F+ + + + P++FTF VI C + +G
Sbjct: 279 IRNVVSWTMIITTYTQSGQEENALRAFIRMQ-EIGVSPNDFTFAAVISGCANLGKTEWGE 337
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG +GL+ + V+N++I +Y KC ++ +F+ + R++VSW++II G+S+ G
Sbjct: 338 QLHGHMLCLGLMTFLSVANSVITLYSKCGQLKSASMVFKELTRRDVVSWSTIIAGYSQGG 397
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+F+ L +M EG P+ +T+ +VL
Sbjct: 398 CAEEAFEYLSRMR--REGPKPNELTLASVL 425
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 95/189 (50%), Gaps = 4/189 (2%)
Query: 107 CGHEKDIEIGKRVHELVSASTQFSN---DFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
C +D+ + V +S TQ SN IN++L + G D+R++FD + R+
Sbjct: 20 CTDYRDLSVAYSVPNNLSHKTQPSNLINMLEINSKLKALVK-TGCLQDARQMFDEMPHRD 78
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
W ++SG+ T+ L++F ++ L+ D F +K CG + +G +H
Sbjct: 79 EISWTTIISGYVNAIDTTEALTLFSKMWVVPGLRMDPFILSLALKICGLSLNESYGESLH 138
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G + K + VFV +AL+ MY K +++ ++F MP RN+VSW +II GF G+S
Sbjct: 139 GYSVKSDFVDSVFVGSALVDMYMKFDKIQQGCQIFHAMPIRNVVSWTAIITGFVHAGYSK 198
Query: 284 ESFDLLIKM 292
E +M
Sbjct: 199 EGLVYFSQM 207
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 90/176 (51%), Gaps = 3/176 (1%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ +IT+YS CG + VF L R++ W+ +++G+++ + + +
Sbjct: 354 VANSVITLYSKCGQLKSASMVFKELTRRDVVSWSTIIAGYSQGGCAEEAFEYLSRMRREG 413
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
KP+ T V+ CG +A + G +H A +GL + +ALI MY KC ++E
Sbjct: 414 P-KPNELTLASVLSVCGNMAILEQGKQLHAHALHVGLEQTAMIQSALINMYSKCGSIKEA 472
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F+ ++VSW ++I G++E+G E+ DL K+ G PD +T + VL
Sbjct: 473 SKIFDEAENNDIVSWTAMINGYAEHGCRQEAIDLFEKIP--RIGLKPDPVTFIGVL 526
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+ CG + G+ +H S + F + + + L+ MY ++F ++ RN
Sbjct: 122 LKICGLSLNESYGESLHGY-SVKSDFVDSVFVGSALVDMYMKFDKIQQGCQIFHAMPIRN 180
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W A+++GF + L F ++ +++ D++TF +KAC + + G +H
Sbjct: 181 VVSWTAIITGFVHAGYSKEGLVYFSQMWR-SKVVCDSYTFAIALKACANLGALDHGRQIH 239
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
A K L FV+N L MY KC ++ +LFE M RN+VSW II ++++G
Sbjct: 240 CQALKRSLEASSFVANTLATMYNKCGKLDYGSRLFEKMTIRNVVSWTMIITTYTQSGQEE 299
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ I+M E G P+ T V+
Sbjct: 300 NALRAFIRMQ--EIGVSPNDFTFAAVI 324
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L CG+ +E GK++H + +I + LI MYS CG ++ ++FD +
Sbjct: 424 VLSVCGNMAILEQGKQLHAH-ALHVGLEQTAMIQSALINMYSKCGSIKEASKIFDEAENN 482
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGF 218
++ W A+++G+ ++ + + +F ++ LKPD TF V+ AC G+ D+GF
Sbjct: 483 DIVSWTAMINGYAEHGCRQEAIDLFEKIPR-IGLKPDPVTFIGVLTACSHAGLVDLGF 539
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 110/214 (51%), Gaps = 4/214 (1%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
++ G L+ A + + +GK VH + D I T LI MY CG + R+F
Sbjct: 247 QQTFGSLVSAAAMQSKLGVGKMVHGHI-LRAGLEQDSHIETSLIGMYLKCGNVNSAFRIF 305
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
+ + +++ W A++SG +N+ +++F + + + P T V+ AC +
Sbjct: 306 EGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLK-SRVMPSTATIASVLAACAELGSF 364
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G+ VHG + + D+ N+L+ MY KC +E+ +F+ M R++VSWN+I+ G
Sbjct: 365 PLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGH 424
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++NG C++ L +M + PD ITVV++L
Sbjct: 425 AQNGHLCKALLLFNEMRKARQR--PDSITVVSLL 456
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 89/178 (50%), Gaps = 2/178 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +G VH + + D L+TMY+ CG S VFD + R
Sbjct: 354 VLAACAELGSFPLGTSVHGYI-LRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRR 412
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA+VSG +N L +F E+ + +PD+ T +++AC I + G +
Sbjct: 413 DIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQ-RPDSITVVSLLQACASIGALHQGKWI 471
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H K L + + AL+ MY KC + K F+ MP+++LVSW+SII G+ +G
Sbjct: 472 HNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHG 529
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 97/182 (53%), Gaps = 3/182 (1%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F +D + ++ +Y CG D++ +F+ + R++ WN+LVSG+ + +VL + +
Sbjct: 177 FGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLI 236
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
+ +D ++PD TF ++ A + +G G VHG + GL D + +LI MY KC
Sbjct: 237 RMKTDG-IEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKC 295
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
V ++FE M ++++SW ++I G +N + + + +M+ + +P T+ +
Sbjct: 296 GNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRML--KSRVMPSTATIAS 353
Query: 309 VL 310
VL
Sbjct: 354 VL 355
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L++AC G H+ V +S+D I T LI YS G +R+VFD++ R
Sbjct: 54 LVKACTSLDLFSHGLSFHQRVIVDG-YSSDSYIATSLINFYSKFGHNQSARKVFDTMDDR 112
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W ++ +T+ + S++ + ++P + T ++ G+ ++ +
Sbjct: 113 NVVPWTTMIGCYTRAGEHDVAFSMY-NIMRRQGIQPSSVT---MLGLLSGVLELVHLQCL 168
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G DV ++N+++ +Y KC VE+ LFE+M R+++SWNS++ G+++ G
Sbjct: 169 HACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNI 228
Query: 283 CESFDLLIKMMGCEEGFIPD 302
E LLI+M +G PD
Sbjct: 229 REVLQLLIRMK--TDGIEPD 246
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
+NA+++ + + DVL + + S T+ PD TFP ++KAC + G H
Sbjct: 16 YNAIINRLSTAGAFCDVLLTYSSMLS-TDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
G D +++ +LI Y K + K+F+ M +RN+V W ++I ++ G +F
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134
Query: 287 DLLIKMMGCEEGFIPDVITVVTVL 310
+ M +G P +T++ +L
Sbjct: 135 SMYNIMR--RQGIQPSSVTMLGLL 156
>gi|242090301|ref|XP_002440983.1| hypothetical protein SORBIDRAFT_09g018390 [Sorghum bicolor]
gi|241946268|gb|EES19413.1| hypothetical protein SORBIDRAFT_09g018390 [Sorghum bicolor]
Length = 454
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 134/278 (48%), Gaps = 41/278 (14%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHEL-VSAS 126
++ L ++ + ++L++ + +ATGV L A G + +G+++H V A
Sbjct: 128 VSGLNRSGRARDAVVALVRMHGEGLLRPDATGVSCALSAVGDVGLVSVGEQLHGYAVKAG 187
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
+ D + T LI MY CG + +VFD ++ NAL++G ++N ++ L +
Sbjct: 188 CRL--DACVVTALIDMYGKCGRAAEIVQVFDESSHMDVASCNALIAGLSRNTQVSEALRL 245
Query: 187 FVEL----------------------SSDTE------------LKPDNFTFPCVIKACGG 212
F E D E ++P++ T PCV+ A
Sbjct: 246 FREFVGRGLELNVVSWTSIVACCVQNGKDLEAVELFREMQAQGIEPNSVTIPCVLPAFAN 305
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
+A + G H A + G + DV+VS+AL+ MY KC V++ +F+ MP RN+VSWN++
Sbjct: 306 VAALTHGRSAHSFALRKGFLHDVYVSSALVDMYAKCGRVKDARTIFDAMPSRNVVSWNAM 365
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I G++ +G + + L M+ C++ PD++T VL
Sbjct: 366 IGGYAMHGEAVNAVRLFHSMLLCKQK--PDMVTFTCVL 401
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 65/132 (49%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN LVSG ++ D + V + + L+PD C + A G + V G +
Sbjct: 120 NVITWNGLVSGLNRSGRARDAVVALVRMHGEGLLRPDATGVSCALSAVGDVGLVSVGEQL 179
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A K G D V ALI MYGKC E+V++F+ ++ S N++I G S N
Sbjct: 180 HGYAVKAGCRLDACVVTALIDMYGKCGRAAEIVQVFDESSHMDVASCNALIAGLSRNTQV 239
Query: 283 CESFDLLIKMMG 294
E+ L + +G
Sbjct: 240 SEALRLFREFVG 251
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F +D +++ L+ MY+ CG D+R +FD++ +RN+ WNA++ G+ + + + +F
Sbjct: 324 FLHDVYVSSALVDMYAKCGRVKDARTIFDAMPSRNVVSWNAMIGGYAMHGEAVNAVRLFH 383
Query: 189 ELSSDTELKPDNFTFPCVIKAC 210
+ + KPD TF CV+ AC
Sbjct: 384 SMLLCKQ-KPDMVTFTCVLAAC 404
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
+ PD P K+C + +H A GL+ D FV+++L+ Y + +
Sbjct: 16 IPPDPHLLPTAFKSC---PTLPLARALHAAAEVTGLVRDPFVASSLLHAYLRLGATVDAR 72
Query: 256 KLFEVM--PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
+F+ M P+R +V W++++ + G + ++ LL +M + G P+VIT
Sbjct: 73 AVFDGMPPPQRTVVGWSALVAAHAARGDAGGAWRLLEEMRR-DGGVEPNVIT 123
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 5/210 (2%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++L+AC +++G+ VHE + T+ + + +I M++ CG D+RR+F+ +
Sbjct: 138 LVLKACSSLHALQLGRWVHETMHGKTK--ANVYVQCAVIDMFAKCGSVEDARRMFEEMPD 195
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R+L W AL+ G N + L +F ++ S+ L PD+ ++ ACG + V G
Sbjct: 196 RDLASWTALICGTMWNGECLEALLLFRKMRSEG-LMPDSVIVASILPACGRLEAVKLGMA 254
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+ A + G D++VSNA+I MY KC E ++F M ++VSW+++I G+S+N
Sbjct: 255 LQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCL 314
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
ES+ L I M+ G + I +VLP
Sbjct: 315 YQESYKLYIGMINV--GLATNAIVATSVLP 342
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 115/209 (55%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG + +++G + ++ + + F +D ++ +I MY CG PL++ RVF +
Sbjct: 239 ILPACGRLEAVKLGMAL-QVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYS 297
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+ L++G+++N LY + +++ + + L + V+ A G + + G +
Sbjct: 298 DVVSWSTLIAGYSQNCLYQESYKLYIGMI-NVGLATNAIVATSVLPALGKLELLKQGKEM 356
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K GL+ DV V +ALI MY C ++E +FE +++++ WNS+I G++ G
Sbjct: 357 HNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDF 416
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+F ++ G E P+ ITVV++LP
Sbjct: 417 ESAFFTFRRIWGAEHR--PNFITVVSILP 443
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 6/176 (3%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
++L+ +Y G + F +L + + WNA++ G +T + + + +
Sbjct: 71 SQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHG-V 129
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVH-GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
PDN+T+P V+KAC + + G VH M K +V+V A+I M+ KC VE+
Sbjct: 130 TPDNYTYPLVLKACSSLHALQLGRWVHETMHGKTK--ANVYVQCAVIDMFAKCGSVEDAR 187
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++FE MP+R+L SW ++ICG NG E+ L KM EG +PD + V ++LP
Sbjct: 188 RMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMR--SEGLMPDSVIVASILP 241
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L A G + ++ GK +H V S D ++ + LI MY+ CG ++ +F+ +
Sbjct: 340 VLPALGKLELLKQGKEMHNFVLKEGLMS-DVVVGSALIVMYANCGSIKEAESIFECTSDK 398
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSS--DTELKPDNFTFPCVIKACGGIADVGFGS 220
++ WN+++ G+ L D S F E +P+ T ++ C + + G
Sbjct: 399 DIMVWNSMIVGYN---LVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGK 455
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII--CGFSE 278
+HG K GL +V V N+LI MY KC F+E K+F+ M RN+ ++N++I CG
Sbjct: 456 EIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHG 515
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G +F +K EEG P+ +T +++L
Sbjct: 516 QGEKGLAFYEQMK----EEGNRPNKVTFISLL 543
>gi|125587253|gb|EAZ27917.1| hypothetical protein OsJ_11878 [Oryza sativa Japonica Group]
Length = 583
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 107/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL ACG + +GK +H + ++ N I + L+ Y CG + R+ +++ R
Sbjct: 355 LLSACGSLQSPYLGKELHAQIIKNSMEEN-LQIGSTLVWFYCKCGEYTYAARILEAMPDR 413
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W AL+SG+ + L ++ D +KP+ +T+ +KAC + + +G +
Sbjct: 414 DAISWTALISGYNNLGHNVEALKSLDDMLWDG-VKPNTYTYSSALKACAKLEALQYGRKI 472
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K +VFV ++LI MY +C V+E +F+ MPE NLV+W II GF++NG
Sbjct: 473 HGFVNKTQDFSNVFVGSSLIDMYMRCGKVDEARSVFDAMPEHNLVTWKVIITGFAQNGLC 532
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + M +EG D + TVL
Sbjct: 533 EEALKYMYLMQ--QEGHEVDDFVLSTVL 558
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 112/208 (53%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL++CG D ++G++VH + +SN I+++ + Y+ CG + +FD + R
Sbjct: 154 LLKSCGERCDAKLGQQVHCCI-VKGGWSN-VIVDSAIAHFYAQCGDVASASAIFDKMAYR 211
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +++ + ++ L +F E+ S+ +P+ FT V+KAC V FG +
Sbjct: 212 DVISWTTMITAYVQHGHGGQALRMFSEMVSEG-FRPNEFTVCSVLKACAEEKAVRFGKQL 270
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K D+ + +AL+ MY +C V + +F++MP RN ++W S+I G++++G
Sbjct: 271 HCAVLKKMYKNDIHIGSALVTMYARCGEVFDAQAVFDMMPRRNTITWTSMISGYAQSGHG 330
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E LL + M F+ + +T+V +L
Sbjct: 331 -EKAILLFRKMKMRRVFVNN-LTIVGLL 356
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC EK + GK++H V + ND I + L+TMY+ CG D++ VFD + R
Sbjct: 254 VLKACAEEKAVRFGKQLHCAV-LKKMYKNDIHIGSALVTMYARCGEVFDAQAVFDMMPRR 312
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N W +++SG+ ++ + +F ++ + +N T ++ ACG + G +
Sbjct: 313 NTITWTSMISGYAQSGHGEKAILLFRKMKM-RRVFVNNLTIVGLLSACGSLQSPYLGKEL 371
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K + ++ + + L+ Y KC ++ E MP+R+ +SW ++I G++ G +
Sbjct: 372 HAQIIKNSMEENLQIGSTLVWFYCKCGEYTYAARILEAMPDRDAISWTALISGYNNLGHN 431
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M+ +G P+ T + L
Sbjct: 432 VEALKSLDDMLW--DGVKPNTYTYSSAL 457
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 109/213 (51%), Gaps = 8/213 (3%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
EA L+ CG + +RVH + S F+ N LI+ Y+ D+R VFD
Sbjct: 51 EALASSLRDCGGADGV---RRVHAVAVRSLDSLGTFVANN-LISAYARFDEVSDAREVFD 106
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
+ R++ W A+++ + K Y +V+ +F ++ + ++ ++ TF C++K+CG D
Sbjct: 107 EMPERSVVSWTAMMNVYLKLGHYGEVVRLFFDMVG-SGVQGNSLTFVCLLKSCGERCDAK 165
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G VH K G +V V +A+ Y +C V +F+ M R+++SW ++I +
Sbjct: 166 LGQQVHCCIVKGGW-SNVIVDSAIAHFYAQCGDVASASAIFDKMAYRDVISWTTMITAYV 224
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++G ++ + +M+ EGF P+ TV +VL
Sbjct: 225 QHGHGGQALRMFSEMV--SEGFRPNEFTVCSVL 255
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 4/199 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
D+ GK +H V +D I + L+ MY+ DS RVF L R+ WN+LV
Sbjct: 221 DVLKGKEIHGYV-IRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLV 279
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
+G+ +N Y + L +F ++ S +++P F VI AC +A + G +HG + G
Sbjct: 280 AGYVQNGRYNEALRLFRQMVS-AKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 338
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
++F+++AL+ MY KC ++ K+F+ M + VSW +II G + +G E+ L +
Sbjct: 339 GRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEE 398
Query: 292 MMGCEEGFIPDVITVVTVL 310
M +G P+ + V VL
Sbjct: 399 MK--RQGVKPNQVAFVAVL 415
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 105/173 (60%), Gaps = 3/173 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+I++Y+ ++ VF +L++ + W +++ FT L++ L+ FVE+ + P
Sbjct: 45 VISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRC-P 103
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D+ FP V+K+C + D+ FG VHG ++G+ D++ NAL+ MY K ++ + K+F
Sbjct: 104 DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVF 163
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+MP +++VS+N++I G++++G ++ +++ MG + PD T+ +VLP
Sbjct: 164 ELMPRKDVVSYNTVIAGYAQSGMYEDALR-MVREMGTSD-LKPDAFTLSSVLP 214
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 114/211 (54%), Gaps = 8/211 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYS-LCGFPLDS-RRVFDSLK 160
+L++C D+ G+ VH + D L+ MYS L G +DS R+VF+ +
Sbjct: 111 VLKSCTMMMDLRFGESVHGFI-VRLGMDCDLYTGNALMNMYSKLLG--IDSVRKVFELMP 167
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+++ +N +++G+ ++ +Y D L + E+ + ++LKPD FT V+ DV G
Sbjct: 168 RKDVVSYNTVIAGYAQSGMYEDALRMVREMGT-SDLKPDAFTLSSVLPIFSEYVDVLKGK 226
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG + G+ DV++ ++L+ MY K A +E+ ++F + R+ +SWNS++ G+ +NG
Sbjct: 227 EIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNG 286
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ L +M+ + P + +V+P
Sbjct: 287 RYNEALRLFRQMVSAK--VRPGAVAFSSVIP 315
>gi|147842436|emb|CAN71830.1| hypothetical protein VITISV_033606 [Vitis vinifera]
Length = 799
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 116/210 (55%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
L+++C K G+ +H+ +V+A F ++ ++ MYS G ++ +VF+ +
Sbjct: 60 LIRSCIKFKAFSQGREIHKHMVNAG--FEPSLVLLNNIMIMYSKFGDFGETFKVFEGMDE 117
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
RNLF W ++ +KN + ++ ++ S + +K D F +P V+K+CG + D+ G
Sbjct: 118 RNLFSWTVMIGACSKNGDAEKAIELYGKMIS-SGVKADCFLYPLVLKSCGAVKDLRRGQC 176
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VHG GL+GDV V N+LI MY KC V + ++F+ M R++++W ++I G+ + G
Sbjct: 177 VHGEVLITGLLGDVVVMNSLIDMYMKCEMVGDSERVFDEMDVRDVITWTTMIVGYMQMGR 236
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E +LL +M+ + P T+ VLP
Sbjct: 237 GLEGLELLKEMLSSQ--VRPSSATLAGVLP 264
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 93/188 (49%), Gaps = 2/188 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++L++CG KD+ G+ VH V T D ++ LI MY C DS RVFD +
Sbjct: 160 LVLKSCGAVKDLRRGQCVHGEVLI-TGLLGDVVVMNSLIDMYMKCEMVGDSERVFDEMDV 218
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ W ++ G+ + + L + E+ S ++++P + T V+ + +
Sbjct: 219 RDVITWTTMIVGYMQMGRGLEGLELLKEMLS-SQVRPSSATLAGVLPLFSDLGYLKLAKQ 277
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG+AA G + V AL+ +Y C + +F+ + E+++ WN++I + +
Sbjct: 278 IHGLAAVTGFEYEKHVGTALVDVYANCGGLYFGRLVFDRVKEKDVSCWNTMIKSYVQANL 337
Query: 282 SCESFDLL 289
S E+ LL
Sbjct: 338 SDEAISLL 345
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 105/233 (45%), Gaps = 38/233 (16%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+++ K++H L +A T F + + T L+ +Y+ CG R VFD +K +++ WN ++
Sbjct: 272 LKLAKQIHGL-AAVTGFEYEKHVGTALVDVYANCGGLYFGRLVFDRVKEKDVSCWNTMIK 330
Query: 173 GFTKNELYTDVLSI--FVELSSDTELKPDNFTF--------------------------- 203
+ + L + +S+ F+ L +K + F
Sbjct: 331 SYVQANLSDEAISLLKFMHLDGIHPVKSTWYCFFPHYSKSKFSIHKFLKLIKCLEHAGVK 390
Query: 204 PCVI------KACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
P V+ + + +VG +H + G I + V ++L MY K A +E ++
Sbjct: 391 PGVVPDTLLDQMXENVENVGQVKELHLFFKRSGGISNSSVGSSLXRMYSKFAVLEPAQEI 450
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F + + L WNSI+ ++ NG++ ++ +L KM + G P+V + T++
Sbjct: 451 FSCLGVKELDXWNSILACYAHNGYANKASELFNKMR--KTGIEPNVRSWNTLI 501
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 87/199 (43%), Gaps = 18/199 (9%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
K +H S SN + + L MYS ++ +F L + L WN++++ +
Sbjct: 413 KELHLFFKRSGGISNS-SVGSSLXRMYSKFAVLEPAQEIFSCLGVKELDXWNSILACYAH 471
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF 236
N +F ++ T ++P+ ++ +I G DVG A + ++
Sbjct: 472 NGYANKASELFNKMRK-TGIEPNVRSWNTLI---AGFVDVG------DFEAALETFSEMK 521
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMP----ERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+N Y K F+ E ++F M E N ++W +++ G+++ G ES ++
Sbjct: 522 WTNQR-PNYWKGGFLXEASRIFHEMEVAGIEGNTITWTTLVAGYAQXGLXDESLKHFREL 580
Query: 293 MGCEEGFIPDVITVVTVLP 311
+G P+ IT+ ++LP
Sbjct: 581 Q--LKGLKPNSITIASILP 597
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
F +LSS+T L +I++C G +H G + + N ++ MY
Sbjct: 49 FPQLSSETYLS--------LIRSCIKFKAFSQGREIHKHMVNAGFEPSLVLLNNIMIMYS 100
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
K E K+FE M ERNL SW +I S+NG + ++ +L KM+
Sbjct: 101 KFGDFGETFKVFEGMDERNLFSWTVMIGACSKNGDAEKAIELYGKMI 147
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 143 YSLCGFPLDSRRVFDSLKTR----NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
Y GF ++ R+F ++ N W LV+G+ + L + L F EL LKP
Sbjct: 529 YWKGGFLXEASRIFHEMEVAGIEGNTITWTTLVAGYAQXGLXDESLKHFRELQLKG-LKP 587
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGM 225
++ T ++ AC A + G +HG+
Sbjct: 588 NSITIASILPACAQSATLSHGKSIHGV 614
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 5/198 (2%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL-KTRNLFQWNALVS 172
E+ ++H LV S+D I L++ Y CG + ++F + +TR+ WN+++S
Sbjct: 607 EVSHQIHALVLKYC-LSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMIS 665
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G+ NEL + + V + D+FTF ++ AC +A + G VH + L
Sbjct: 666 GYIHNELLHKAMDL-VWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLE 724
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
DV V +AL+ MY KC ++ + FE+MP RN+ SWNS+I G++ +G ++ L +M
Sbjct: 725 SDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRM 784
Query: 293 MGCEEGFIPDVITVVTVL 310
M +G PD +T V VL
Sbjct: 785 M--LDGQPPDHVTFVGVL 800
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+ VH V + N I L+ MY+ G D+ VF+ + ++ WN+L+SG
Sbjct: 405 GREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLD 464
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+NE D F + + P NFT + +C + + G +H K+GL DV
Sbjct: 465 QNECSEDAAESFHRMRRTGSM-PSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDV 523
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC-ESFDLLIKMMG 294
VSNAL+A+Y + E +K+F +MPE + VSWNS+I S++ S ++ ++MM
Sbjct: 524 SVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMM- 582
Query: 295 CEEGFIPDVITVVTVL 310
G+ +T + +L
Sbjct: 583 -RGGWGLSRVTFINIL 597
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 5/189 (2%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
E + +H L S F + ++ LI +Y G ++++FD + RNL W L+SG
Sbjct: 88 EEARELH-LQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISG 146
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGL 231
+T+N + + F ++ P+++ F ++AC G + G +HG+ +K
Sbjct: 147 YTQNGKPDEACARFRDMVR-AGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRY 205
Query: 232 IGDVFVSNALIAMYGKC-AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
DV V N LI+MYG C + +F+ + RN +SWNSII +S G + ++DL
Sbjct: 206 GSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFS 265
Query: 291 KMMGCEEGF 299
M GF
Sbjct: 266 SMQKEGLGF 274
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 92/186 (49%), Gaps = 9/186 (4%)
Query: 99 ATGVLLQACGHE--KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC-GFPLDSRRV 155
A G L+AC ++G ++H L+S T++ +D ++ LI+MY C D+R V
Sbjct: 174 AFGSALRACQESGPSGCKLGVQIHGLIS-KTRYGSDVVVCNVLISMYGSCLDSANDARSV 232
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT---ELKPDNFTFPCVIKACGG 212
FD + RN WN+++S +++ +F + + KP+ +TF +I
Sbjct: 233 FDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACS 292
Query: 213 IADVGFGSGVHGMA--AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
D G +A K G + D++VS+AL++ + + ++ +FE M RN+VS N
Sbjct: 293 SVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMN 352
Query: 271 SIICGF 276
++ G
Sbjct: 353 GLMVGL 358
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 88/185 (47%), Gaps = 5/185 (2%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F D +++ L++ ++ G D++ +F+ + RN+ N L+ G K + +F
Sbjct: 313 FLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFH 372
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSG--VHGMAAKMGLIGD-VFVSNALIAMY 245
E+ + D++ + + + G G VH + GL + V + N L+ MY
Sbjct: 373 EMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMY 432
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
K + + +FE+M E++ VSWNS+I G +N S ++ + +M G +P T
Sbjct: 433 AKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMR--RTGSMPSNFT 490
Query: 306 VVTVL 310
+++ L
Sbjct: 491 LISTL 495
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 6/176 (3%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L AC +E G VH +D ++ + L+ MYS CG + R F+ +
Sbjct: 696 ATILSACASVATLERGMEVHA-CGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMP 754
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGF 218
RN++ WN+++SG+ ++ L +F + D + PD+ TF V+ AC G + GF
Sbjct: 755 LRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQ-PPDHVTFVGVLSACSHVGFVEEGF 813
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSII 273
M+ L V + ++ + G+ ++E+ MP + N++ W +++
Sbjct: 814 -EHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVL 868
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 113/253 (44%), Gaps = 21/253 (8%)
Query: 75 EESKSLNKALSLLQENLHNADLKEA------TGVL---------LQACGHEKDIEIGKRV 119
++S S N +S L +N + D E+ TG + L +C I +G+++
Sbjct: 451 KDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQI 510
Query: 120 HELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNEL 179
H D ++ L+ +Y+ G + +VF + + WN+++ + +E
Sbjct: 511 H-CDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEA 569
Query: 180 -YTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVS 238
+ + F+++ TF ++ A ++ +H + K L D +
Sbjct: 570 SVSQAVKYFLQMMRGG-WGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIG 628
Query: 239 NALIAMYGKCAFVEEMVKLFEVMPE-RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEE 297
NAL++ YGKC + E K+F M E R+ VSWNS+I G+ N ++ DL+ MM ++
Sbjct: 629 NALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMM--QK 686
Query: 298 GFIPDVITVVTVL 310
G D T T+L
Sbjct: 687 GQRLDSFTFATIL 699
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 8/84 (9%)
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H + K G +G++F+SN LI +Y + + KLF+ M RNLV+W +I G+++NG
Sbjct: 93 LHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGK 152
Query: 282 ---SCESFDLLIKMMGCEEGFIPD 302
+C F +++ GFIP+
Sbjct: 153 PDEACARFRDMVRA-----GFIPN 171
>gi|242051244|ref|XP_002463366.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
gi|241926743|gb|EER99887.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
Length = 745
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 121/247 (48%), Gaps = 12/247 (4%)
Query: 68 QEITTLCEESKSLNKALSLLQENLHNADLKEAT---GVLLQACGHEKDIEIGKRVHELVS 124
+ T+ + + AL+ L D++ V L + + +++H L S
Sbjct: 116 RSYNTILSATPDPDDALAFAARMLRTGDVRPDAVTFTVTLSLAAGRGEAHLVRQLHALAS 175
Query: 125 ASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKN-ELYTDV 183
+ D + L+T YS G +R+VF+ + R+L WNALV G ++ E +V
Sbjct: 176 -RAGIATDVFVGNALVTAYSRGGLMDAARKVFEEMPARDLVSWNALVCGLAQDGECSAEV 234
Query: 184 LSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIA 243
+ +F+ + +++PD + VI ACG + G +HG A K+G+ G V ++N L+A
Sbjct: 235 IRVFLRMLKQGDVRPDRISVCSVIPACGAEGKLELGRQIHGFAVKLGVEGHVSIANVLVA 294
Query: 244 MYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
MY KC +LFE M ER+++SW +++ E+ S F+ + + +G P+
Sbjct: 295 MYYKCGTPGCARRLFEFMGERDVISWTTVMSMDGEDAVSL--FNGMRR-----DGVAPNE 347
Query: 304 ITVVTVL 310
+T V +L
Sbjct: 348 VTFVAML 354
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 97/197 (49%), Gaps = 7/197 (3%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+ +H V T S+ LITMY+ D+R +F + + WNAL+SG+
Sbjct: 366 GQMIHA-VCLKTSLSDKAAAANSLITMYAKLRRMDDARMIFSLMPHSEIIAWNALISGYA 424
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV--GFGSGVHGMAAKMGLIG 233
+NE+ D L F+ + +KP+ TF ++ A + V +G H A K+GL
Sbjct: 425 QNEMCQDALEAFLAMMKI--MKPNETTFASILSAVTAVETVSMAYGQMYHCQALKLGLGA 482
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
+VS ALI MY K +EE K F R+L++W +II S++G L M+
Sbjct: 483 SEYVSGALIDMYAKRGSLEESWKAFGETVHRSLIAWTAIISANSKHGNYDAVVSLFNDMV 542
Query: 294 GCEEGFIPDVITVVTVL 310
G G PD + +++VL
Sbjct: 543 G--SGVAPDGVVLLSVL 557
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 105/211 (49%), Gaps = 10/211 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ ACG E +E+G+++H + I L+ MY CG P +RR+F+ + R
Sbjct: 257 VIPACGAEGKLELGRQIHGF-AVKLGVEGHVSIANVLVAMYYKCGTPGCARRLFEFMGER 315
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W ++S E D +S+F + D + P+ TF ++ + G G +
Sbjct: 316 DVISWTTVMS--MDGE---DAVSLFNGMRRDG-VAPNEVTFVAMLSSMPGDCPAREGQMI 369
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF- 281
H + K L +N+LI MY K +++ +F +MP +++WN++I G+++N
Sbjct: 370 HAVCLKTSLSDKAAAANSLITMYAKLRRMDDARMIFSLMPHSEIIAWNALISGYAQNEMC 429
Query: 282 --SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+F ++K+M E +++ VT +
Sbjct: 430 QDALEAFLAMMKIMKPNETTFASILSAVTAV 460
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 76/132 (57%), Gaps = 4/132 (3%)
Query: 182 DVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNAL 241
D L+ + +++PD TF + G + +H +A++ G+ DVFV NAL
Sbjct: 130 DALAFAARMLRTGDVRPDAVTFTVTLSLAAGRGEAHLVRQLHALASRAGIATDVFVGNAL 189
Query: 242 IAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG-FSCESFDLLIKMMGCEEGFI 300
+ Y + ++ K+FE MP R+LVSWN+++CG +++G S E + ++M+ ++G +
Sbjct: 190 VTAYSRGGLMDAARKVFEEMPARDLVSWNALVCGLAQDGECSAEVIRVFLRML--KQGDV 247
Query: 301 -PDVITVVTVLP 311
PD I+V +V+P
Sbjct: 248 RPDRISVCSVIP 259
>gi|225450928|ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
[Vitis vinifera]
Length = 656
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 116/222 (52%), Gaps = 3/222 (1%)
Query: 86 LLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSL 145
L + ++ D T VL AC + + K +H LV + + + LIT Y
Sbjct: 146 LYESGIYQFDQATLTTVL-TACDKPEFCYVSKMIHSLVFLYG-YEREITVGNALITSYFR 203
Query: 146 CGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPC 205
CG RRVFD + +N+ W A++SG ++ + Y + L +F ++ D + P++ T+
Sbjct: 204 CGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKMR-DGPVDPNSLTYLS 262
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
+ AC G+ + G +HG+ K+G+ D+ + +AL+ MY KC +E+ K+FE E +
Sbjct: 263 SLMACSGLQAIREGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVD 322
Query: 266 LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
VS I+ G ++NGF ES + +KM+ P++I+ +
Sbjct: 323 EVSMTVILVGLAQNGFEEESIQVFVKMVKNGVVIDPNMISAI 364
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 6/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHELV-SASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L AC + I G+++H LV F D I + L+ MYS CG D+ ++F+S +
Sbjct: 264 LMACSGLQAIREGRQIHGLVWKLGVHF--DLCIESALMDMYSKCGSLEDAWKIFESAEEV 321
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ ++ G +N + + +FV++ + + N ++ G + G +
Sbjct: 322 DEVSMTVILVGLAQNGFEEESIQVFVKMVKNGVVIDPNM-ISAILGVFGIDTSLALGKQI 380
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + K + FV+N LI MY KC +++ +K+F MP+RN VSWNS+I F+ +G
Sbjct: 381 HSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNG 440
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L +M EG P +T +++L
Sbjct: 441 SRALQLYEEMR--LEGVWPTDVTFLSLL 466
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 9/199 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQF---------SNDFIINTRLITMYSLCGFPLDSR 153
LL CG E + +G +H + + F N ++ L++MYS CG D+
Sbjct: 50 LLSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSRCGELRDAT 109
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
+VFD + ++ WN+ +SG N +F +L + D T V+ AC
Sbjct: 110 KVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTVLTACDKP 169
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
+H + G ++ V NALI Y +C ++F+ M E+N+V+W ++I
Sbjct: 170 EFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVI 229
Query: 274 CGFSENGFSCESFDLLIKM 292
G S+ F ES L KM
Sbjct: 230 SGLSQGQFYEESLKLFGKM 248
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 4/182 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L G + + +GK++H L+ + F +++ +N LI MYS CG DS ++F + R
Sbjct: 364 ILGVFGIDTSLALGKQIHSLIIKKS-FGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQR 422
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG- 221
N WN++++ F ++ + L ++ E+ + + P + TF ++ AC + V G G
Sbjct: 423 NSVSWNSMIAAFARHGNGSRALQLYEEMRLEG-VWPTDVTFLSLLHACAHVGLVEKGMGF 481
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSENG 280
+ MA G+ + ++ M G+ + E K E +PE+ ++ W +++ S +G
Sbjct: 482 LESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQALLGACSIHG 541
Query: 281 FS 282
S
Sbjct: 542 NS 543
>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Brachypodium distachyon]
Length = 678
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 109/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + G+ +H V SN FI ++ MY CG D+R+VFD L
Sbjct: 234 VLMACTMLGSLHQGRLIHGSVMKHGLVSNHFI-TAAMLDMYVKCGEAEDARQVFDELSFV 292
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L W ++ G+T+N D L +FV+ + P++ T V+ A + ++ G +
Sbjct: 293 DLVLWTTMIVGYTQNGSPLDALLLFVD-DKFMRIVPNSVTIATVLSASAQLRNLSLGRSI 351
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG++ K+G + + V NAL+ MY KC + + +F + +++V+WNS+I G++EN
Sbjct: 352 HGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAGYAENDMG 411
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L M +G +PD I+VV L
Sbjct: 412 SDALMLFSHMR--VQGSLPDAISVVNAL 437
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 113/210 (53%), Gaps = 11/210 (5%)
Query: 104 LQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+A D G+R+H ++V A D + L+ MY+ G ++R+VFD + R
Sbjct: 135 LKAAVRSADFGYGRRLHCDVVKAG---GGDLFVMNNLVDMYAKGGDLKNARKVFDRIPDR 191
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W +++SG +N L + L +F E+ ++ L P +T V+ AC + + G +
Sbjct: 192 NVVSWTSMLSGCLQNGLAKEGLVLFNEMRQESIL-PSEYTMASVLMACTMLGSLHQGRLI 250
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K GL+ + F++ A++ MY KC E+ ++F+ + +LV W ++I G+++NG
Sbjct: 251 HGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQVFDELSFVDLVLWTTMIVGYTQNGSP 310
Query: 283 CESFDLLI--KMMGCEEGFIPDVITVVTVL 310
++ L + K M +P+ +T+ TVL
Sbjct: 311 LDALLLFVDDKFM----RIVPNSVTIATVL 336
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 102/193 (52%), Gaps = 2/193 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L A +++ +G+ +H + ND ++N L+ MY+ C D++ +F +
Sbjct: 333 ATVLSASAQLRNLSLGRSIHGISVKLGAVENDVVMNA-LVDMYAKCKALSDAKGIFGRVL 391
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+++ WN+L++G+ +N++ +D L +F + L PD + + AC + D+ G
Sbjct: 392 NKDVVTWNSLIAGYAENDMGSDALMLFSHMRVQGSL-PDAISVVNALSACVCLGDLLIGK 450
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H A K + +++V+ AL+ +Y KCA + ++F M +RN V+W ++I G+ G
Sbjct: 451 CFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDRNTVTWGAMIGGYGMQG 510
Query: 281 FSCESFDLLIKMM 293
S S DL +M+
Sbjct: 511 DSAGSIDLFNEML 523
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 82/197 (41%), Gaps = 6/197 (3%)
Query: 83 ALSLLQENLHNADLKEATGVL--LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLI 140
AL L L +A V+ L AC D+ IGK H + F ++ +NT L+
Sbjct: 414 ALMLFSHMRVQGSLPDAISVVNALSACVCLGDLLIGKCFHTY-AVKHAFMSNIYVNTALL 472
Query: 141 TMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDN 200
+Y+ C ++RVF + RN W A++ G+ + +F E+ D ++P+
Sbjct: 473 NLYNKCADLPSAQRVFSEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLKD-NIQPNE 531
Query: 201 FTFPCVIKACGGIADVGFGSG-VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
F ++ C V G MA + + ++ + + +EE ++ +
Sbjct: 532 AVFTSILSTCSHTGMVTVGKKCFESMAHYFNITPSMKHYACMVDVLARAGNLEEALEFIQ 591
Query: 260 VMPERNLVS-WNSIICG 275
MP + S W + + G
Sbjct: 592 KMPMQADTSIWQAFLHG 608
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 114/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L CG+ D+ G+ +H LV S + T L+TMYS C DS +VF+ L
Sbjct: 209 ILINCGNLGDLVNGQLIHGLVVKSG-LESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYA 267
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N W + V G +N +SIF E+ + P+ FT +++AC +A + G +
Sbjct: 268 NQVTWTSFVVGLVQNGREEVAVSIFREMIR-CSISPNPFTLSSILQACSSLAMLEVGEQI 326
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + K+GL G+ + ALI +YGKC +++ +F+V+ E ++V+ NS+I +++NGF
Sbjct: 327 HAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFG 386
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L ++ G +P+ +T +++L
Sbjct: 387 HEALELFERLKNM--GLVPNGVTFISIL 412
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 3/198 (1%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
I G+R H L D + + L+ MY+ D+ VF + +++ + AL+
Sbjct: 117 IRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIV 176
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G+ ++ L + L IF ++ + +KP+ +T C++ CG + D+ G +HG+ K GL
Sbjct: 177 GYAQHGLDGEALKIFEDMV-NRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLE 235
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
V +L+ MY +C +E+ +K+F + N V+W S + G +NG + + +M
Sbjct: 236 SVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREM 295
Query: 293 MGCEEGFIPDVITVVTVL 310
+ C P+ T+ ++L
Sbjct: 296 IRCS--ISPNPFTLSSIL 311
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 107/209 (51%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ H K + + VH V S FS F+ +LI Y CG ++R++FD L +R
Sbjct: 7 LIAQSAHTKSLTTLRAVHTNVIKSG-FSYSFL-GHKLIDGYIKCGSLAEARKLFDELPSR 64
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+++S + + + + + + L PD +TF + KA + + G
Sbjct: 65 HIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVL-PDAYTFSAISKAFSQLGLIRHGQRA 123
Query: 223 HGMAAKMGL-IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
HG+A +GL + D FV++AL+ MY K + + +F + E+++V + ++I G++++G
Sbjct: 124 HGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGL 183
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + M+ G P+ T+ +L
Sbjct: 184 DGEALKIFEDMV--NRGVKPNEYTLACIL 210
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 7/174 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQAC +E+G+++H + N + LI +Y CG +R VFD L
Sbjct: 310 ILQACSSLAMLEVGEQIHAITMKLGLDGNKYA-GAALINLYGKCGNMDKARSVFDVLTEL 368
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ N+++ + +N + L +F L + L P+ TF ++ AC V G +
Sbjct: 369 DVVAINSMIYAYAQNGFGHEALELFERLK-NMGLVPNGVTFISILLACNNAGLVEEGCQI 427
Query: 223 HGMAAK---MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
+ L D F +I + G+ +EE L E + ++V W +++
Sbjct: 428 FASIRNNHNIELTIDHF--TCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLL 479
>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 1131
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 113/214 (52%), Gaps = 4/214 (1%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
+ + G +L A + G VH + ++ + + L+ MY+ C +++VF
Sbjct: 309 RSSLGSVLSAIASLSMLNYGSMVHAQ-AIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVF 367
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
+SL RN+ WNA++ GF +N L +V+ F + +PD FTF + AC + +
Sbjct: 368 NSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGP-QPDEFTFTSIFSACASLHYL 426
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
FG +H + K ++FV+NAL+ MY K ++E K FE M + VSWN+II G+
Sbjct: 427 DFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGY 486
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ E+F + +M+ G +PD +++ +++
Sbjct: 487 VQEEYNDEAFFMFRRMV--SNGVLPDEVSLASIV 518
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 122/236 (51%), Gaps = 9/236 (3%)
Query: 80 LNKALSLLQENLHNADLK--EAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
L +A+ L QE + LK E T LL C + +G+++H V S+ ++
Sbjct: 592 LEEAIHLFQE-IQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVC 650
Query: 137 TRLITMYSLCGFPLDSRRVFDSLK-TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
L+ MY DS +F L+ + L W AL+SG+ + + L + + SD
Sbjct: 651 VSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNI 710
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
L PD TF V++AC G++ + G VH + G D ++LI MY KC V+ +
Sbjct: 711 L-PDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSL 769
Query: 256 KLFEVMPERN-LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F MP RN ++SWNS+I G ++NG++ E+ ++ +M ++ IPD +T + VL
Sbjct: 770 QVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQME--QQSIIPDEVTFLGVL 823
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 3/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I +I Y G D+R++F + N+ WN ++SG K + +S F+EL
Sbjct: 242 DQIALVTVINAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELK 301
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
T LK + V+ A ++ + +GS VH A K GL +V+V +AL+ MY KC+ +
Sbjct: 302 K-TGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKM 360
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++F + ERN+V WN+++ GF++NG + E + M G PD T ++
Sbjct: 361 DAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMK--RHGPQPDEFTFTSIF 417
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 95/177 (53%), Gaps = 3/177 (1%)
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
++ ++ +Y CG +++ F L+ +++F WN+++S + + L+ V+ FV + +
Sbjct: 77 LLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNH 136
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
++P+ FTF V+ AC G+ D+ +G VH KMG F LI MY KC + +
Sbjct: 137 G-VRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRD 195
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ + VSW ++I G+ +GF E+ + KM G +PD I +VTV+
Sbjct: 196 ARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQ--RVGHVPDQIALVTVI 250
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 2/175 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ AC ++ G ++H ++ + SN F+ N L+ MY+ G ++R+ F+ +K
Sbjct: 416 IFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANA-LVDMYAKSGALKEARKQFEFMKIH 474
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA++ G+ + E + +F + S+ L PD + ++ AC + + G
Sbjct: 475 DNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVL-PDEVSLASIVSACANVKEFKQGQQC 533
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
H + K+GL ++LI MY KC V +F MP RN+VS N++I G++
Sbjct: 534 HCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYT 588
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 7/210 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC + K+ + G++ H L+ + LI MY CG L +R VF S+ R
Sbjct: 517 IVSACANVKEFKQGQQCHCLL-VKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYR 575
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ NAL++G+T + L + + +F E+ LKP TF ++ C G + G +
Sbjct: 576 NVVSINALIAGYTMSHL-EEAIHLFQEIQM-VGLKPTEVTFAGLLDGCDGAFMLNLGRQI 633
Query: 223 HGMAAKMGLIGDV-FVSNALIAMYGKCAFVEEMVKLF-EVMPERNLVSWNSIICGFSENG 280
HG K G + V +L+ MY + LF E+ + LV W ++I G+++
Sbjct: 634 HGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQN 693
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ M + +PD T +VL
Sbjct: 694 HHEKALQFYQHMR--SDNILPDQATFASVL 721
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 114/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC + DI +G++V+ LV + ++ + LI+MYS CG ++R+ FD L +
Sbjct: 256 VLKACANLSDIWLGEQVYALV-VKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEK 314
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL +N +V+ + K+ + +F E+ + FTF ++ I +G G +
Sbjct: 315 NLVSYNTIVNAYAKSLNSEEAFELFNEIEG-AGTGVNAFTFASLLSGASSIGAIGKGEQI 373
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G ++ + NALI+MY +C +E ++F M + N++SW S+I GF+++GF+
Sbjct: 374 HSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFA 433
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + KM+ E G P+ +T + VL
Sbjct: 434 TRALETFHKML--EAGVSPNEVTYIAVL 459
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 115/200 (57%), Gaps = 6/200 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC---GFPLDSRRVFDSL 159
++ AC + +G++ H LV S D + L+ MY+ C G D+R+VFD +
Sbjct: 151 VVSACAEMGLLSLGRQFHCLVMKSG-LDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRM 209
Query: 160 KTRNLFQWNALVSGFTKNE-LYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
N+ W A+++G+ ++ + + +F+E+ ++KP++FTF V+KAC ++D+
Sbjct: 210 PVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQG-QVKPNHFTFSSVLKACANLSDIWL 268
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G V+ + KM L V N+LI+MY +C +E K F+V+ E+NLVS+N+I+ +++
Sbjct: 269 GEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAK 328
Query: 279 NGFSCESFDLLIKMMGCEEG 298
+ S E+F+L ++ G G
Sbjct: 329 SLNSEEAFELFNEIEGAGTG 348
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 107/200 (53%), Gaps = 9/200 (4%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDS-RRVFDS 158
TGV +AC ++++I +GK + + + F +D + LI M+ L+S +VFD
Sbjct: 46 TGVF-RACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDR 104
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ RN+ W +++ F + D + +F+++ + PD FT V+ AC + +
Sbjct: 105 MPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYV-PDRFTLSGVVSACAEMGLLSL 163
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKC---AFVEEMVKLFEVMPERNLVSWNSIICG 275
G H + K GL DV V +L+ MY KC V++ K+F+ MP N++SW +II G
Sbjct: 164 GRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITG 223
Query: 276 FSENGFSC--ESFDLLIKMM 293
+ ++G C E+ +L ++M+
Sbjct: 224 YVQSG-GCDREAIELFLEMV 242
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 81/151 (53%), Gaps = 5/151 (3%)
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R+L W+AL+S + NE + +S F ++ + P+ + F V +AC ++ G
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDML-ECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 222 VHGMAAKMGLI-GDVFVSNALIAMYGKC-AFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+ G K G DV V ALI M+ K +E K+F+ MP+RN+V+W +I F +
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
GFS ++ DL + M+ G++PD T+ V+
Sbjct: 124 GFSRDAVDLFLDMV--LSGYVPDRFTLSGVV 152
>gi|225436126|ref|XP_002274172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 313
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 113/209 (54%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL +C ++D++ K++H + +DFI +L+ Y+ C + +F R
Sbjct: 13 LLDSCASKRDLQKLKQIHARIITVGISRHDFI-RAKLVASYASCAQMSQASYIFSLTNRR 71
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP-DNFTFPCVIKACGGIADVGFGSG 221
F +N+L+ G++ L++ LSIF ++ KP D +T P V+K+C G++ + G
Sbjct: 72 PTFLYNSLIRGYSSLFLFSQSLSIFCQMLFAH--KPIDCYTLPAVLKSCSGLSALRLGRQ 129
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH GL D+ NALI+MY KC + K+F+ M ERNLV+W++++ G+ +G
Sbjct: 130 VHCAVVANGLASDLATINALISMYSKCGDLAAARKVFDRMTERNLVTWSAMMAGYGVHGV 189
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E F+L M+ + G +PD +T VL
Sbjct: 190 FGEVFELFDGMV--DAGEVPDGVTFTAVL 216
>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 1441
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 114/214 (53%), Gaps = 4/214 (1%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
+ + G +L A + G VH + ++ + + L+ MY+ C +++VF
Sbjct: 309 RSSLGSVLSAIASLSMLNYGSMVHAQATKEG-LDDNVYVGSALVNMYAKCSKMDAAKQVF 367
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
+SL RN+ WNA++ GF +N L +V+ F + +PD FTF + AC + +
Sbjct: 368 NSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGP-QPDEFTFTSIFSACASLHYL 426
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
FG +H + K ++FV+NAL+ MY K ++E K FE+M + VSWN+II G+
Sbjct: 427 NFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGY 486
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ E+F + +M+ G +PD +++ +++
Sbjct: 487 VQEEYNDEAFFMFRRMV--SNGVLPDEVSLASIV 518
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 122/236 (51%), Gaps = 9/236 (3%)
Query: 80 LNKALSLLQENLHNADLK--EAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
L +A+ L QE + LK E T LL C + +G+++H V S+ ++
Sbjct: 592 LEEAIHLFQE-IQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVC 650
Query: 137 TRLITMYSLCGFPLDSRRVFDSLK-TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
L+ +Y +DS +F L+ + L W AL+SG+ + + L + + SD
Sbjct: 651 VSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNI 710
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
L PD F V++AC G++ + G +H + G D ++LI MY KC V+ +
Sbjct: 711 L-PDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSL 769
Query: 256 KLFEVMPER-NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F MP R N++SWNS+I G ++NG++ E+ ++ +M ++ IPD +T + VL
Sbjct: 770 QVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQME--QQSIIPDEVTFLGVL 823
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 96/177 (54%), Gaps = 3/177 (1%)
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
++ ++ +Y CG +++ F L+ +++F WN+++S + + L+ V+ FV + +
Sbjct: 77 LLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMW-N 135
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
E++P+ FTF V+ AC G+ DV FG VH K G F LI MY KC ++ +
Sbjct: 136 HEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRD 195
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ + VSW ++I G+ +GF E+ + +M G PD IT+VTV+
Sbjct: 196 ARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQ--RVGHAPDQITLVTVV 250
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 3/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I ++ Y G D+R++F + N+ WN ++SG K + +S F+EL
Sbjct: 242 DQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELK 301
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
T LK + V+ A ++ + +GS VH A K GL +V+V +AL+ MY KC+ +
Sbjct: 302 K-TGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKM 360
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++F + ERN+V WN+++ GF++NG + E + M G PD T ++
Sbjct: 361 DAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMK--RHGPQPDEFTFTSIF 417
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 2/175 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ AC + G ++H ++ + SN F+ N L+ MY+ G ++R+ F+ +K
Sbjct: 416 IFSACASLHYLNFGGQLHTVMIKNKFASNLFVANA-LVDMYAKSGALKEARKQFELMKIH 474
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA++ G+ + E + +F + S+ L PD + ++ AC + ++ G
Sbjct: 475 DNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVL-PDEVSLASIVSACANVQELKRGQQC 533
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
H + K+GL ++LI MY KC V +F MP RN+VS N++I G++
Sbjct: 534 HCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYT 588
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 7/210 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC + ++++ G++ H L+ + LI MY CG L +R VF S+ +R
Sbjct: 517 IVSACANVQELKRGQQCHCLL-VKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSR 575
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ NAL++G+T L + + +F E+ LKP TF ++ C G + G +
Sbjct: 576 NVVSVNALIAGYTMGHL-EEAIHLFQEIQM-VGLKPTEVTFAGLLDGCDGAFMLNLGRQI 633
Query: 223 HGMAAKMGLIGDV-FVSNALIAMY-GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
HG K G + V +L+ +Y FV+ E+ + LV W ++I G+++
Sbjct: 634 HGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQN 693
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ M + +PD +VL
Sbjct: 694 HHEKALQFYQHMR--SDNILPDQAAFASVL 721
>gi|302142721|emb|CBI19924.3| unnamed protein product [Vitis vinifera]
Length = 912
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 109/218 (50%), Gaps = 7/218 (3%)
Query: 95 DLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSR 153
D+ T G++L C D+E GK+VH + +SN F+ N L+ MY CG +R
Sbjct: 391 DIDHVTVGLILNVCAGLSDVESGKQVHGFIYRHGLYSNLFVGNA-LLHMYGKCGNLRSTR 449
Query: 154 RVFDSLKT-RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
F + R+ WNAL++ ++ L + ++IF E+ +T P FT ++ AC
Sbjct: 450 LWFYQMSHWRDRISWNALLTSHARHGLSEEAMTIFGEMQWET--TPSKFTLGTLLSACAN 507
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
I + G +HG + G DV AL+ MY KC +E +K+F+ P R+L+ WNS+
Sbjct: 508 IFALEQGKQIHGFMIRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEAPSRDLILWNSM 567
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I G NG + L M EEG PD IT +L
Sbjct: 568 ILGCCHNGRGRDVLGLFGLME--EEGVKPDHITFQGIL 603
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 104/190 (54%), Gaps = 2/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +C + + K++H L+ F + I+ + L+ +Y C D+RR+FD ++
Sbjct: 167 VLGSCATVLALFLSKQIHGLI-VKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIENP 225
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WN +V + + + + +F ++ ++P NFTF + AC I+ + G +
Sbjct: 226 NAISWNVIVRRYLEMGNEKEAVVMFFKMIR-ANIRPLNFTFSNALIACSSISALQEGIQI 284
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+A ++G D VS++LI MY KC +E ++FE+ +NL+SW SI+ G++ +G +
Sbjct: 285 HGVAIRIGYDEDEVVSSSLIDMYAKCGDLESACRIFELPSSKNLISWTSIVSGYAMSGQT 344
Query: 283 CESFDLLIKM 292
E+ L +M
Sbjct: 345 REARVLFDEM 354
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 99/191 (51%), Gaps = 10/191 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ CG D+E R+ EL S S + I T +++ Y++ G ++R +FD + R
Sbjct: 306 MYAKCG---DLESACRIFELPS-----SKNLISWTSIVSGYAMSGQTREARVLFDEMPER 357
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA+++G+T + + L FV L D+ T ++ C G++DV G V
Sbjct: 358 SVISWNAMLAGYTHFCQWEEALE-FVFLMRKATQDIDHVTVGLILNVCAGLSDVESGKQV 416
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE-RNLVSWNSIICGFSENGF 281
HG + GL ++FV NAL+ MYGKC + F M R+ +SWN+++ + +G
Sbjct: 417 HGFIYRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRDRISWNALLTSHARHGL 476
Query: 282 SCESFDLLIKM 292
S E+ + +M
Sbjct: 477 SEEAMTIFGEM 487
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 2/191 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L Q C I ++V + + F++N R I Y C D+R +F+ + R
Sbjct: 66 LFQICSSNLAIVEARKVESHLITFSPAPPIFLLN-RAIETYGKCSCLDDARELFEEMPQR 124
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA+++ + + L +F ++ + + TF V+ +C + + +
Sbjct: 125 DGGSWNAMITAYAQGGCAEKALWLFSRMNR-LGIWANEITFASVLGSCATVLALFLSKQI 183
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ K G +V + ++L+ +YGKC + + ++F+ + N +SWN I+ + E G
Sbjct: 184 HGLIVKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIENPNAISWNVIVRRYLEMGNE 243
Query: 283 CESFDLLIKMM 293
E+ + KM+
Sbjct: 244 KEAVVMFFKMI 254
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 4/184 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G LL AC + +E GK++H + + D + L+ MYS C + +VF
Sbjct: 499 GTLLSACANIFALEQGKQIHGFM-IRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEAP 557
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+R+L WN+++ G N DVL +F L + +KPD+ TF ++ C G G+
Sbjct: 558 SRDLILWNSMILGCCHNGRGRDVLGLF-GLMEEEGVKPDHITFQGILLGCICEGLAGLGT 616
Query: 221 GV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSE 278
+ M+ K +I + ++I +YG+ F++E+ + MP E + + SE
Sbjct: 617 EYFNSMSNKYCIIPRLEHYESMIELYGRHGFMDELEDFIKRMPFEPTVAMLTRVFNACSE 676
Query: 279 NGFS 282
+G S
Sbjct: 677 HGHS 680
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 5/198 (2%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL-KTRNLFQWNALVS 172
E+ ++H LV S+D I L++ Y CG + ++F + +TR+ WN+++S
Sbjct: 455 EVSHQIHALVLKYC-LSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMIS 513
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G+ NEL + + V + D+FTF ++ AC +A + G VH + L
Sbjct: 514 GYIHNELLHKAMDL-VWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLE 572
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
DV V +AL+ MY KC ++ + FE+MP RN+ SWNS+I G++ +G ++ L +M
Sbjct: 573 SDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRM 632
Query: 293 MGCEEGFIPDVITVVTVL 310
M +G PD +T V VL
Sbjct: 633 M--LDGQPPDHVTFVGVL 648
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 5/189 (2%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
E + +H L S F + ++ LI +Y G ++++FD + RNL W L+SG
Sbjct: 116 EEARELH-LQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISG 174
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGL 231
+T+N + + F ++ P+++ F ++AC G + G +HG+ +K
Sbjct: 175 YTQNGKPDEACARFRDMVR-AGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRY 233
Query: 232 IGDVFVSNALIAMYGKC-AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
DV V N LI+MYG C + +F+ + RN +SWNSII +S G + ++DL
Sbjct: 234 GSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFS 293
Query: 291 KMMGCEEGF 299
M GF
Sbjct: 294 SMQKEGLGF 302
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 14/189 (7%)
Query: 99 ATGVLLQACGHE--KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC-GFPLDSRRV 155
A G L+AC ++G ++H L+S T++ +D ++ LI+MY C D+R V
Sbjct: 202 AFGSALRACQESGPSGCKLGVQIHGLIS-KTRYGSDVVVCNVLISMYGSCLDSANDARSV 260
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT---ELKP-DNFTFPCVIKACG 211
FD + RN WN+++S +++ +F + + KP D F+ V++
Sbjct: 261 FDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEE-- 318
Query: 212 GIADVGFGSGVHGMAAKMGLIGD-VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
G VH + GL + V + N L+ MY K + + +FE+M E++ VSWN
Sbjct: 319 ---GRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWN 375
Query: 271 SIICGFSEN 279
S+I G +N
Sbjct: 376 SLISGLDQN 384
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 101/233 (43%), Gaps = 34/233 (14%)
Query: 110 EKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNA 169
E+ G+ VH V + N I L+ MY+ G D+ VF+ + ++ WN+
Sbjct: 317 EEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNS 376
Query: 170 LVSGFTKNELYTDVLSIF--------------VELSSDTELKPDNFT--FPCVIKACGGI 213
L+SG +NE D +F + SD+E F +++ G+
Sbjct: 377 LISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGL 436
Query: 214 ADVGF---------------GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ V F +H + K L D + NAL++ YGKC + E K+F
Sbjct: 437 SRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIF 496
Query: 259 EVMPE-RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
M E R+ VSWNS+I G+ N ++ DL+ MM ++G D T T+L
Sbjct: 497 ARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMM--QKGQRLDSFTFATIL 547
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 6/176 (3%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L AC +E G VH +D ++ + L+ MYS CG + R F+ +
Sbjct: 544 ATILSACASVATLERGMEVHA-CGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMP 602
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGF 218
RN++ WN+++SG+ ++ L +F + D + PD+ TF V+ AC G + GF
Sbjct: 603 LRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQ-PPDHVTFVGVLSACSHVGFVEEGF 661
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSII 273
M+ L V + ++ + G+ ++E+ MP + N++ W +++
Sbjct: 662 -EHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVL 716
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 8/84 (9%)
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H + K G +G++F+SN LI +Y + + KLF+ M RNLV+W +I G+++NG
Sbjct: 121 LHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGK 180
Query: 282 ---SCESFDLLIKMMGCEEGFIPD 302
+C F +++ GFIP+
Sbjct: 181 PDEACARFRDMVR-----AGFIPN 199
>gi|255565109|ref|XP_002523547.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537254|gb|EEF38886.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 555
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 109/212 (51%), Gaps = 9/212 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC +++ G +H V F D + L+ Y G+ D+++VFD + R
Sbjct: 16 VLKACADNLNVQKGMEIHGCV-FKLGFDFDVFVGNTLLLFYGNTGYLSDAKKVFDEMLER 74
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN L+ F+ N Y L +F E++ + +P+ T V+ C + D S +
Sbjct: 75 DVVSWNTLLGAFSVNGFYLKALDLFYEMNLRSGFRPNMVTVVSVLPVCAALEDEVVASEI 134
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS---EN 279
H K+GL V + NAL+ +YGKC ++ ++F+ M ERN VSWN+II + N
Sbjct: 135 HCYVVKIGLDSQVTLCNALVDVYGKCGNLKSSRRVFDEMMERNEVSWNAIITSLAYMEHN 194
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ E+F L+I E P+ +T+ ++LP
Sbjct: 195 KDALEAFRLMIN-----EEVKPNSVTIASILP 221
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 113/233 (48%), Gaps = 7/233 (3%)
Query: 82 KALSLLQE-NLHNADLKEATGVL--LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
KAL L E NL + V+ L C +D + +H V + +
Sbjct: 94 KALDLFYEMNLRSGFRPNMVTVVSVLPVCAALEDEVVASEIHCYV-VKIGLDSQVTLCNA 152
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+ +Y CG SRRVFD + RN WNA+++ E D L F L + E+KP
Sbjct: 153 LVDVYGKCGNLKSSRRVFDEMMERNEVSWNAIITSLAYMEHNKDALEAF-RLMINEEVKP 211
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
++ T ++ + G +HG + + G+ DVF+SN+LI MY K + +F
Sbjct: 212 NSVTIASILPVLVELEHFDLGKEIHGFSLRFGIESDVFISNSLIDMYAKSGHSTQASVVF 271
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+M E+N+VSWN+++ F++N F + +L+ +M +G IP+ +T LP
Sbjct: 272 HLMTEKNVVSWNAMVANFAQNRFELAAIELVRQMQ--TDGAIPNPVTFTNALP 322
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
++PD+ TFP V+KAC +V G +HG K+G DVFV N L+ YG ++ +
Sbjct: 6 IRPDDHTFPFVLKACADNLNVQKGMEIHGCVFKLGFDFDVFVGNTLLLFYGNTGYLSDAK 65
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
K+F+ M ER++VSWN+++ FS NGF ++ DL + M GF P+++TVV+VLP
Sbjct: 66 KVFDEMLERDVVSWNTLLGAFSVNGFYLKALDLFYE-MNLRSGFRPNMVTVVSVLP 120
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
++GK +H S +D I+ LI MY+ G + VF + +N+ WNA+V+
Sbjct: 230 DLGKEIHGF-SLRFGIESDVFISNSLIDMYAKSGHSTQASVVFHLMTEKNVVSWNAMVAN 288
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
F +N + + ++ +D + P+ TF + AC + + G +H A +MG
Sbjct: 289 FAQNRFELAAIELVRQMQTDGAI-PNPVTFTNALPACARMGFLRPGKEIHARAFRMGCYF 347
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM- 292
D FVSNAL MY KC F+ +F + R+ VS+N +I G+S+ S ES L ++M
Sbjct: 348 DQFVSNALTDMYAKCGFLNLARNVFNI-SLRDEVSYNILIVGYSQTTNSSESLSLFLEMG 406
Query: 293 -MGCEEGFIPDVITVVTVLP 311
+G E DV++ + V+
Sbjct: 407 LVGMER----DVVSYMGVIA 422
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 103/207 (49%), Gaps = 5/207 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + GK +H + + F+ N L MY+ CGF +R VF+ + R+
Sbjct: 321 LPACARMGFLRPGKEIHARAFRMGCYFDQFVSNA-LTDMYAKCGFLNLARNVFN-ISLRD 378
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+N L+ G+++ ++ LS+F+E+ ++ D ++ VI AC + + G +H
Sbjct: 379 EVSYNILIVGYSQTTNSSESLSLFLEMGL-VGMERDVVSYMGVIAACASLVALKQGEEIH 437
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ + L +F++N+L+ Y KC ++ K+F + E++ SWN+II G G
Sbjct: 438 ALVVRKNLHMHIFIANSLLDFYTKCGKIDLACKIFYRISEKDAASWNTIILGVGMLGELE 497
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L M E+G D ++ + VL
Sbjct: 498 AAINLFEAMR--EDGVEYDSVSYIAVL 522
>gi|302808794|ref|XP_002986091.1| hypothetical protein SELMODRAFT_182148 [Selaginella moellendorffii]
gi|300146239|gb|EFJ12910.1| hypothetical protein SELMODRAFT_182148 [Selaginella moellendorffii]
Length = 604
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 113/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL ACG K++ G+R+H + A+ F+ N LI MY CG D R F +K R
Sbjct: 39 LLLACGRSKNLGNGRRLHARIVATGHQDVMFLANHILI-MYGKCGGMEDLSRAFSGMKRR 97
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WNA++S + +N+ +D + IF+ + D ++P TF V+ A G + V
Sbjct: 98 NIVSWNAVISAYAQNDRSSDAIVIFLRMLLDG-IQPSYVTFTSVLNAFAGPELHRWAKLV 156
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A ++G V+ AL+ MY K ++ ++F+ + +++VSW+++I +++ G
Sbjct: 157 HDLALEVGFGSHPVVATALLNMYSKVGSIDRARQVFDELAIKDVVSWSNMIAAYAQTGHG 216
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ ++ +M EG +VIT VTV+
Sbjct: 217 TEALEMFHRMDA--EGIQANVITFVTVV 242
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 103/195 (52%), Gaps = 4/195 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
K VH+L + F + ++ T L+ MYS G +R+VFD L +++ W+ +++ +
Sbjct: 153 AKLVHDL-ALEVGFGSHPVVATALLNMYSKVGSIDRARQVFDELAIKDVVSWSNMIAAYA 211
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+ T+ L +F + ++ ++ + TF V+ AC +A + +H + GL +
Sbjct: 212 QTGHGTEALEMFHRMDAEG-IQANVITFVTVVHACVLVARITDARTIHCRIIEAGLESNT 270
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+ AL+ MYGKC + E K+F+ + ER++V W++I+ ++ +G + L M
Sbjct: 271 VLGTALLNMYGKCGGLAEAKKIFDKLAERDVVVWSAILEAYARHGHPRVALKLFTLMQ-- 328
Query: 296 EEGFIPDVITVVTVL 310
+EG P+ +T V VL
Sbjct: 329 QEGVRPNDVTFVGVL 343
>gi|359481819|ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vitis vinifera]
Length = 977
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 113/206 (54%), Gaps = 4/206 (1%)
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNL 164
+ACG +IG+ VH + T + D + + ++ MY+ CG D+R++FD + RN+
Sbjct: 18 KACGILSRCDIGQSVHSF-AVKTGYDCDVFVGSSMVDMYAKCGEIGDARKMFDEMPDRNV 76
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
W+ ++ G+++ + L +F + + +L ++FTF V++ CG + G +HG
Sbjct: 77 VSWSGMIYGYSQMGEDEEALRLFKQALIE-DLDVNDFTFSSVVRVCGNSTLLELGKQIHG 135
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCE 284
+ K FV ++LI++Y KC +E+ +F +P RNL WN+++ +++ + +
Sbjct: 136 LCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNLGMWNAMLIACAQHAHTEK 195
Query: 285 SFDLLIKMMGCEEGFIPDVITVVTVL 310
+FDL +M G G P+ IT + VL
Sbjct: 196 AFDLFKQMEGV--GMKPNFITFLCVL 219
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 58/97 (59%)
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
D ++PD+ FP KACG ++ G VH A K G DVFV ++++ MY KC +
Sbjct: 3 DNGVRPDDHIFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIG 62
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL 289
+ K+F+ MP+RN+VSW+ +I G+S+ G E+ L
Sbjct: 63 DARKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLF 99
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 100/202 (49%), Gaps = 5/202 (2%)
Query: 82 KALSLLQENL-HNADLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
+AL L ++ L + D+ + T +++ CG+ +E+GK++H L ++ S+ F + + L
Sbjct: 94 EALRLFKQALIEDLDVNDFTFSSVVRVCGNSTLLELGKQIHGLCLKTSYDSSSF-VGSSL 152
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
I++YS CG D+ VF + RNL WNA++ ++ +F ++ +KP+
Sbjct: 153 ISLYSKCGVIEDAYLVFHEIPIRNLGMWNAMLIACAQHAHTEKAFDLFKQMEG-VGMKPN 211
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
TF CV+ AC V G + + G+ +++ + G+ +++ V + +
Sbjct: 212 FITFLCVLYACSHAGLVEKGQFYFELMKEYGIEPGAQHYASMVDLLGRAGKLKDAVSIIK 271
Query: 260 VMP-ERNLVSWNSIICGFSENG 280
MP E W +++ G +G
Sbjct: 272 KMPMEPTESVWGALLTGCRIHG 293
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 121/242 (50%), Gaps = 10/242 (4%)
Query: 76 ESKSLNKALSLLQENLH-NADLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQ---FS 130
E+ +AL L +E + N E T V ++ AC IE+G++VH V FS
Sbjct: 173 ENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFS 232
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
+ I LI +YS CG + +F+ L +++ WN L+ G+T LY + L +F E+
Sbjct: 233 SSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEM 292
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM--GLIGDVFVSNALIAMYGKC 248
E P++ T V+ AC + + G +H K G+ + + +LI MY KC
Sbjct: 293 LRSGEC-PNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKC 351
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
+E ++F M R+L SWN++I GF+ +G + +FDL +M G PD IT V
Sbjct: 352 GDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRG--NRVEPDDITFVG 409
Query: 309 VL 310
+L
Sbjct: 410 LL 411
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 97/185 (52%), Gaps = 7/185 (3%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
D + T LIT Y+ G +R+VFD + R++ WNA+++G+ +N Y + L +F E+
Sbjct: 128 RDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEM 187
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM----GLIGDVFVSNALIAMYG 246
T ++PD T V+ AC + G VH G + + NALI +Y
Sbjct: 188 MR-TNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYS 246
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
KC VE LFE + +++VSWN++I G++ E+ L +M+ G P+ +T+
Sbjct: 247 KCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEML--RSGECPNDVTL 304
Query: 307 VTVLP 311
++VLP
Sbjct: 305 LSVLP 309
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 34/187 (18%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VF++++ NL WN ++ G + L ++V + S L P++++FP ++K+C
Sbjct: 20 VFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHL-PNSYSFPFLLKSCAKSK 78
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV-------------- 260
G +H K+G D +V +LI+MY + +E+ K+F+
Sbjct: 79 AFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALIT 138
Query: 261 -----------------MPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
+ ER++VSWN++I G+ ENG E+ +L +MM PD
Sbjct: 139 GYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMM--RTNVRPDE 196
Query: 304 ITVVTVL 310
T+V+V+
Sbjct: 197 GTLVSVV 203
>gi|212722152|ref|NP_001132130.1| uncharacterized protein LOC100193547 [Zea mays]
gi|194693508|gb|ACF80838.1| unknown [Zea mays]
gi|413918286|gb|AFW58218.1| hypothetical protein ZEAMMB73_151558 [Zea mays]
Length = 552
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 138/284 (48%), Gaps = 16/284 (5%)
Query: 33 IQRNKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQ--EN 90
+Q H++R + K S + ++ +N A + + + T++C L K +Q E
Sbjct: 86 VQSRLHTMR---RGKESFA-NSNSNQAQPKHGNIVSNNTSVCPSITRLTKEDMFMQIVEL 141
Query: 91 LHNADLKEATGVLLQA---CGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLC 146
+ +L A C EK + G + H +LV + + I + LI+ YS C
Sbjct: 142 HRRGQISSDASILASALSYCADEKTLTTGVQFHAQLVKVG--YVSSIPIGSSLISFYSRC 199
Query: 147 GFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCV 206
+ R+F ++ ++ W AL+SG+ ++ L +F L + KP++ TF +
Sbjct: 200 SQLEIAHRIFQNMTAKSTVTWTALISGYAQDNQVEPCLHLFA-LMRQSVCKPNDITFATI 258
Query: 207 IKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNL 266
+ C A + G V + +MG V VSNALI+MY KC + E +FE + ++L
Sbjct: 259 LSVCTNHAFLVLGKSVQALQMRMGFGSYVHVSNALISMYAKCGSIGEARAVFESITCKDL 318
Query: 267 VSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
VSWNS+I G+S++G + LL +M G IPD I+ + VL
Sbjct: 319 VSWNSLIFGYSQHGLAEHCLYLLREMEG---HIIPDAISFLGVL 359
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 88/181 (48%), Gaps = 4/181 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L C + + +GK V L F + ++ LI+MY+ CG ++R VF+S+
Sbjct: 256 ATILSVCTNHAFLVLGKSVQAL-QMRMGFGSYVHVSNALISMYAKCGSIGEARAVFESIT 314
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
++L WN+L+ G++++ L L + E+ + + PD +F V+ +C V G
Sbjct: 315 CKDLVSWNSLIFGYSQHGLAEHCLYLLREM--EGHIIPDAISFLGVLSSCRHACLVAEGR 372
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSEN 279
+ G+I ++ + ++ ++G+ ++E L + MP N V W S++ +
Sbjct: 373 RCFRAMIEHGVIPEIDHYSCMVDLFGRAGLLDEAWDLIQTMPMPPNGVIWGSLLASCRLH 432
Query: 280 G 280
G
Sbjct: 433 G 433
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL C + I +GK VH + F ++ T L+ MY CG + +F + R
Sbjct: 335 LLPPCAQLEAILLGKSVHGF-AIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNER 393
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL WNA+++ +TKN +++F +L + T LKPD T ++ A +A + +
Sbjct: 394 NLISWNAMIASYTKNGENRKAMTLFQDLCNKT-LKPDATTIASILPAYAELASLREAEQI 452
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K+ L + FVSN+++ MYGKC + ++F+ M ++++SWN++I ++ +GF
Sbjct: 453 HGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFG 512
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
S +L +M E+GF P+ T V++L
Sbjct: 513 RISIELFSEMR--EKGFEPNGSTFVSLL 538
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 112/210 (53%), Gaps = 5/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L AC E + GK +H +++ + + D ++ T L+ MY+ CG + R+FD +
Sbjct: 233 ILGACSLEGFLRNGKEIHCQMMRSRLEL--DVMVQTSLVDMYAKCGRMDYAERLFDQITD 290
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+++ WNA++ G++ N + + ++ +L PD T ++ C + + G
Sbjct: 291 KSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKS 350
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VHG A + G + + + AL+ MYG+C ++ LF M ERNL+SWN++I +++NG
Sbjct: 351 VHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGE 410
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ ++ L + C + PD T+ ++LP
Sbjct: 411 NRKAMTLFQDL--CNKTLKPDATTIASILP 438
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 3/174 (1%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
TR ++ Y G+ ++ +F++++ + F WN ++ GF N L+ D + + + +
Sbjct: 64 TRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGG-V 122
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
+ DNFT+P VIKACGG+ D+ G VHG K GL D+++ N+LI MY K +E
Sbjct: 123 RGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEM 182
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F MP R+LVSWNS+I G+ G S +M G D +V+ +L
Sbjct: 183 VFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQA--SGIKLDRFSVIGIL 234
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 7/211 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++ACG D+ G+RVH V S D I LI MY+ G + VF + R
Sbjct: 132 VIKACGGLYDLAEGERVHGKVIKSG-LDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVR 190
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN+++SG+ LS F E+ + + +K D F+ ++ AC + G +
Sbjct: 191 DLVSWNSMISGYVSVGDGWRSLSCFREMQA-SGIKLDRFSVIGILGACSLEGFLRNGKEI 249
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + L DV V +L+ MY KC ++ +LF+ + ++++V+WN++I G+S N S
Sbjct: 250 HCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQS 309
Query: 283 CESFDLLIKMMGCEEG--FIPDVITVVTVLP 311
ESF + KM +EG PD IT++ +LP
Sbjct: 310 FESFAYVRKM---QEGGKLHPDWITMINLLP 337
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 107/197 (54%), Gaps = 7/197 (3%)
Query: 118 RVHELVSASTQFSN----DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
R +L SA F N + + +I Y+ + +R++FD + ++L W++++SG
Sbjct: 235 RRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISG 294
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
+++ ++D L IF ++ ++KPD V+ +C + + G VH + +
Sbjct: 295 YSQANHFSDALEIFRQMQR-AKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKA 353
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
D + N+LI MY KC +E +++F+ M E++ +SWNSII G + NGF ES +L M+
Sbjct: 354 DTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAML 413
Query: 294 GCEEGFIPDVITVVTVL 310
EGF P+ +T + VL
Sbjct: 414 --TEGFRPNGVTFLGVL 428
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 9/201 (4%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E KR+H S ++ + ++ L + L + + +VFD ++ F WN L+
Sbjct: 1 MEAIKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIR 60
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G +++ D ++ F + + + PDN TFP ++KAC I + G +H K+GL+
Sbjct: 61 GLAQSDAPADAIA-FYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLL 119
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFD---LL 289
D+FVSN+LI +Y C + +F+ M +++VSWNS+ICG+S+ C F L
Sbjct: 120 SDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQ----CNRFKDILAL 175
Query: 290 IKMMGCEEGFIPDVITVVTVL 310
K+M EG D +T++ V+
Sbjct: 176 FKLMQ-NEGVKADKVTMIKVV 195
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 94/176 (53%), Gaps = 2/176 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC + G+++H ++ S+ F+ N+ LI +Y+ CG +R VFD + +
Sbjct: 93 ILKACARINALNEGEQMHNHITKLGLLSDIFVSNS-LIHLYAACGNLCYARSVFDEMVVK 151
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+L+ G+++ + D+L++F +L + +K D T V+ AC + D +
Sbjct: 152 DVVSWNSLICGYSQCNRFKDILALF-KLMQNEGVKADKVTMIKVVSACTRLGDYSMADYM 210
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
+ DV++ N L+ +G+ ++ K+F M RN+V+ N++I +++
Sbjct: 211 VRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAK 266
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ +C H +++GK VHE V D I+ LI MY CG ++ +VF +K +
Sbjct: 326 VVSSCAHLGALDLGKWVHEYVR-RNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEK 384
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+ WN+++ G N + L++F + ++ +P+ TF V+ AC
Sbjct: 385 DTLSWNSIIIGLANNGFEKESLNLFQAMLTEG-FRPNGVTFLGVLIACA 432
>gi|356509350|ref|XP_003523413.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Glycine max]
Length = 678
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 103/179 (57%), Gaps = 3/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I+ +IT+YS CG D++ +F+++ ++ L WN+++ G T+N ++ L+IF +++
Sbjct: 366 DTILLNTMITVYSNCGRIEDAKLIFNTMPSKTLISWNSILVGLTQNACPSEALNIFSQMN 425
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+LK D F+F VI AC + + G V G A +GL D +S +L+ Y KC FV
Sbjct: 426 K-LDLKMDRFSFASVISACACRSSLELGEQVFGKAITIGLESDQIISTSLVDFYCKCGFV 484
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E K+F+ M + + VSWN+++ G++ NG+ E+ L +M G P IT VL
Sbjct: 485 EIGRKVFDGMVKTDEVSWNTMLMGYATNGYGIEALTLFCEMT--YGGVWPSAITFTGVL 541
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 94/221 (42%), Gaps = 40/221 (18%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L CG D++ R+ V +FS + LI+ Y+ G ++R VFDS
Sbjct: 213 LYGKCG---DLDSAARIVSFVRDVDEFSL-----SALISGYANAGRMREARSVFDSKVDP 264
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
WN+++SG+ N + +++F + + ++ D ++ A G+ V +
Sbjct: 265 CAVLWNSIISGYVSNGEEVEAVNLFSAMLRNG-VQGDASAVANILSAASGLLVVELVKQM 323
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGK-------------------------------CAFV 251
H A K G+ D+ V+++L+ Y K C +
Sbjct: 324 HVYACKAGVTHDIVVASSLLDAYSKCQSPCEACKLFSELKEYDTILLNTMITVYSNCGRI 383
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
E+ +F MP + L+SWNSI+ G ++N E+ ++ +M
Sbjct: 384 EDAKLIFNTMPSKTLISWNSILVGLTQNACPSEALNIFSQM 424
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 4/180 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC +E+G++V + + +D II+T L+ Y CGF R+VFD +
Sbjct: 439 VISACACRSSLELGEQVFG-KAITIGLESDQIISTSLVDFYCKCGFVEIGRKVFDGMVKT 497
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN ++ G+ N + L++F E++ + P TF V+ AC V G +
Sbjct: 498 DEVSWNTMLMGYATNGYGIEALTLFCEMTYGG-VWPSAITFTGVLSACDHSGLVEEGRNL 556
Query: 223 -HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENG 280
H M + + + ++ ++ + + EE + L E MP + + W S++ G +G
Sbjct: 557 FHTMKHSYNINPGIEHFSCMVDLFARAGYFEEAMDLIEEMPFQADANMWLSVLRGCIAHG 616
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 83/207 (40%), Gaps = 37/207 (17%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE--L 196
+++ ++ G + +F+++ ++N WN+++ ++++ L +F ++ D +
Sbjct: 104 VVSAFAKSGHLQLAHSLFNAMPSKNHLVWNSIIHSYSRHGHPGKALFLFKSMNLDPSQIV 163
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHG--MAAKMGLIGDVFVSNALIAMYGKC------ 248
D F + AC + G VH MGL D + ++LI +YGKC
Sbjct: 164 YRDAFVLATALGACADSLALNCGKQVHARVFVDGMGLELDRVLCSSLINLYGKCGDLDSA 223
Query: 249 ----AFV---------------------EEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+FV E +F+ + V WNSII G+ NG
Sbjct: 224 ARIVSFVRDVDEFSLSALISGYANAGRMREARSVFDSKVDPCAVLWNSIISGYVSNGEEV 283
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L M+ G D V +L
Sbjct: 284 EAVNLFSAML--RNGVQGDASAVANIL 308
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 219 GSGVHGMAAKMGLIGD-VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G +H K G++ V V+N L+ +Y +C +++ LF+ MP+ N SWN+++
Sbjct: 19 GRQLHVAFLKTGILNSSVAVANRLLQLYSRCRNLQDASHLFDEMPQTNSFSWNTLVQAHL 78
Query: 278 ENGFSCESFDLLIKM 292
+G + + L M
Sbjct: 79 NSGHTHSALHLFNAM 93
>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 803
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 106/208 (50%), Gaps = 6/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC H +GK +H S + D ++ T ++ MYS G + R+F + RN
Sbjct: 234 LGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRN 293
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN L+ + +N TD F ++S L+PD T ++ AC + G +H
Sbjct: 294 IVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAILE----GRTIH 349
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G A + G + + + ALI MYG+ ++ +F+ + E+NL+SWNSII + +NG +
Sbjct: 350 GYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNY 409
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ +L K+ + +PD T+ ++LP
Sbjct: 410 SALELFQKLW--DSSLLPDSTTIASILP 435
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 103/176 (58%), Gaps = 7/176 (3%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
TR + ++ G D+ ++FD + + F WN ++ GFT LY + L ++ + + +
Sbjct: 64 TRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVF-SGV 122
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
K D+FT+P VIK+ GI+ + G +H M K+ + DV+V N+LI++Y K + K
Sbjct: 123 KADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEK 182
Query: 257 LFEVMPERNLVSWNSIICGF--SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+FE MPER++VSWNS+I G+ E+GF S L +M+ + GF PD + ++ L
Sbjct: 183 VFEEMPERDIVSWNSMISGYLALEDGF--RSLMLFKEML--KFGFKPDRFSTMSAL 234
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 106/200 (53%), Gaps = 4/200 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E GK++H +V +F +D + LI++Y G D+ +VF+ + R++ WN+++S
Sbjct: 142 LEEGKKIHAMV-IKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSWNSMIS 200
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL- 231
G+ E L +F E+ KPD F+ + AC + G +H A + +
Sbjct: 201 GYLALEDGFRSLMLFKEMLK-FGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRIE 259
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
GDV V +++ MY K V ++F+ + +RN+V+WN +I ++ N ++F L +
Sbjct: 260 TGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAF-LCFQ 318
Query: 292 MMGCEEGFIPDVITVVTVLP 311
M + G PDVIT++ +LP
Sbjct: 319 KMSEQNGLQPDVITLINLLP 338
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 6/192 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC I G+ +H + F +++T LI MY G + +FD + +
Sbjct: 336 LLPACA----ILEGRTIHGY-AMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEK 390
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL WN++++ + +N L +F +L D+ L PD+ T ++ A + G +
Sbjct: 391 NLISWNSIIAAYVQNGKNYSALELFQKLW-DSSLLPDSTTIASILPAYAESLSLSEGRQI 449
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K + + N+L+ MY C +E+ K F + +++VSWNSII ++ +GF
Sbjct: 450 HAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFG 509
Query: 283 CESFDLLIKMMG 294
S L +M+
Sbjct: 510 RISVCLFSEMIA 521
>gi|255544888|ref|XP_002513505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547413|gb|EEF48908.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 474
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 116/210 (55%), Gaps = 7/210 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL CG E + IG+ +H V + NT L MY CG ++ +F+ R
Sbjct: 256 LLAVCGDETCLNIGRSIHGFV-VKQGIETNLSWNTSLADMYISCGDETTAKYLFEICPDR 314
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WNA+++ F K + L F + S+ E P++ T V+ C +A++ +G +
Sbjct: 315 DLILWNAMIAAFLKKNKNGEALLFFNRMISEEE--PNSVTIINVLSTCSDLANLPYGQCL 372
Query: 223 HGMAAKM--GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H AA+ + ++ ++NA I MY +C ++ K+F+ +P+R+++SWN++I G+ +G
Sbjct: 373 HAYAARRYSPISLNLSLANAFITMYARCGSMQNAEKIFKTLPKRDIISWNTMITGYGTHG 432
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+C++ ++M+ E+GF P+ +T +++L
Sbjct: 433 SACDAILAFMQML--EDGFRPNGVTFLSIL 460
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 106/211 (50%), Gaps = 6/211 (2%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V++QA +++G ++H++ + + D I L+ MY+ G + +FD++ T
Sbjct: 53 VVIQASADFGSLQLGMQIHQM-AIKLSYVGDLFIQNALLNMYAENGSLKLACHLFDNVIT 111
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD-VGFGS 220
R++ WN+++S + Y + S+F + + T + D T ++ C AD + G
Sbjct: 112 RDVALWNSMISAYIDYAYYEEANSLFSTMRTKT--REDERTIAVMLSLCAEAADGLKMGK 169
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H +A K G+ D +NAL+ MY E +K+F M + ++VS+N++I +
Sbjct: 170 SLHALACKNGMRMDNSTANALLRMYADLNCAESALKVFNEMSDVDVVSYNTLILALCSSN 229
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+++L M E P+ T++++L
Sbjct: 230 LRGEAWELFGMMR--ESKVNPNSHTMISLLA 258
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 127/277 (45%), Gaps = 8/277 (2%)
Query: 37 KHSLRSIFKEKSSLSLSAKT-NNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNAD 95
+++L +++ E SL L+ +N T+ + + + + +A SL
Sbjct: 86 QNALLNMYAENGSLKLACHLFDNVITRDVALWNSMISAYIDYAYYEEANSLFSTMRTKTR 145
Query: 96 LKEAT-GVLLQACGHEKD-IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSR 153
E T V+L C D +++GK +H L + ++ N L+ MY+ +
Sbjct: 146 EDERTIAVMLSLCAEAADGLKMGKSLHALACKNGMRMDNSTANA-LLRMYADLNCAESAL 204
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
+VF+ + ++ +N L+ + L + +F + ++++ P++ T ++ CG
Sbjct: 205 KVFNEMSDVDVVSYNTLILALCSSNLRGEAWELF-GMMRESKVNPNSHTMISLLAVCGDE 263
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
+ G +HG K G+ ++ + +L MY C LFE+ P+R+L+ WN++I
Sbjct: 264 TCLNIGRSIHGFVVKQGIETNLSWNTSLADMYISCGDETTAKYLFEICPDRDLILWNAMI 323
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F + + E+ +M+ EE P+ +T++ VL
Sbjct: 324 AAFLKKNKNGEALLFFNRMISEEE---PNSVTIINVL 357
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Query: 178 ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFV 237
E + L +FV + D ++ D T VI+A + G +H MA K+ +GD+F+
Sbjct: 27 EDFVKALELFVHMVKDG-IEFDMITILVVIQASADFGSLQLGMQIHQMAIKLSYVGDLFI 85
Query: 238 SNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
NAL+ MY + ++ LF+ + R++ WNS+I + + + E+ L M
Sbjct: 86 QNALLNMYAENGSLKLACHLFDNVITRDVALWNSMISAYIDYAYYEEANSLFSTM 140
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 125/239 (52%), Gaps = 8/239 (3%)
Query: 76 ESKSLNKALSLLQENLH-NADLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
E+ + +AL L ++ + N E+T V +L AC IE+G++VH ++ N
Sbjct: 212 ETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLK 271
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
I+N LI +YS CG + +F L +++ WN L+ G+T LY + L +F ++
Sbjct: 272 IVNA-LIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRS 330
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM--GLIGDVFVSNALIAMYGKCAFV 251
E KP++ T ++ AC + + G +H K G+ + +LI MY KC +
Sbjct: 331 GE-KPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDI 389
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E ++F+ M R+L SWN++I GF+ +G + +FD+ +M + G PD IT V +L
Sbjct: 390 EAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMR--KNGIEPDDITFVGLL 446
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 93/179 (51%), Gaps = 3/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + T LIT Y+ G + ++FD + +++ WNA +SG+ + Y + L +F ++
Sbjct: 168 DVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMM 227
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
T ++PD T V+ AC + G VH G ++ + NALI +Y KC +
Sbjct: 228 K-TNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGEL 286
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E LF+ + ++++SWN++I G++ E+ L M+ G P+ +T++++L
Sbjct: 287 ETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDML--RSGEKPNDVTMLSIL 343
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 34/187 (18%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VFD+++ L WN + G + L ++V + S L P+++TFP ++K+C
Sbjct: 59 VFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVS-LGLLPNSYTFPFLLKSCAKSX 117
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAM------------------------------ 244
G +HG K G D+++ +LI+M
Sbjct: 118 AFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALIT 177
Query: 245 -YGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
Y +E K+F+ +P +++VSWN+ I G++E G E+ +L KMM + PD
Sbjct: 178 GYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMM--KTNVRPDE 235
Query: 304 ITVVTVL 310
T+VTVL
Sbjct: 236 STMVTVL 242
>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 804
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 92/160 (57%), Gaps = 3/160 (1%)
Query: 151 DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
D+ ++FD + + F WN ++ GFT LY + + + + +K D FT+P VIK+
Sbjct: 82 DALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVF-AGVKADTFTYPFVIKSV 140
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
GI+ + G +H M K+G + DV+V N+LI++Y K + K+FE MPER++VSWN
Sbjct: 141 AGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWN 200
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S+I G+ G S L +M+ C GF PD + ++ L
Sbjct: 201 SMISGYLALGDGFSSLMLFKEMLKC--GFKPDRFSTMSAL 238
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 108/208 (51%), Gaps = 6/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC H ++GK +H S + D ++ T ++ MYS G + R+F+ + RN
Sbjct: 238 LGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRN 297
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN ++ + +N TD F ++S L+PD T ++ A + G +H
Sbjct: 298 IVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIH 353
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G A + G + + + ALI MYG+C ++ +F+ M E+N++SWNSII + +NG +
Sbjct: 354 GYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNY 413
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ +L ++ + +PD T+ ++LP
Sbjct: 414 SALELFQELW--DSSLVPDSTTIASILP 439
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 4/200 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E GK++H +V F +D + LI++Y G D+ +VF+ + R++ WN+++S
Sbjct: 146 LEEGKKIHAMV-IKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMIS 204
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL- 231
G+ L +F E+ KPD F+ + AC + G +H A + +
Sbjct: 205 GYLALGDGFSSLMLFKEMLK-CGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIE 263
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
GDV V +++ MY K V ++F M +RN+V+WN +I ++ NG ++F L +
Sbjct: 264 TGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAF-LCFQ 322
Query: 292 MMGCEEGFIPDVITVVTVLP 311
M + G PDVIT + +LP
Sbjct: 323 KMSEQNGLQPDVITSINLLP 342
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 2/179 (1%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+ +H + F ++ T LI MY CG + +FD + +N+ WN++++ +
Sbjct: 349 GRTIHGY-AMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYV 407
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+N L +F EL D+ L PD+ T ++ A + G +H K +
Sbjct: 408 QNGKNYSALELFQELW-DSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNT 466
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
+ N+L+ MY C +E+ K F + +++VSWNSII ++ +GF S L +M+
Sbjct: 467 IILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIA 525
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 89/184 (48%), Gaps = 7/184 (3%)
Query: 83 ALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLI 140
AL L QE ++ + ++T + +L A + G+ +H + S +SN I+N+ L+
Sbjct: 415 ALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNS-LV 473
Query: 141 TMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDN 200
MY++CG D+R+ F+ + +++ WN+++ + + + +F E+ + + + P+
Sbjct: 474 HMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIA-SRVNPNK 532
Query: 201 FTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
TF ++ AC G+ D G+ M + G+ + ++ + G+ +
Sbjct: 533 STFASLLAACSISGMVDEGW-EYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFL 591
Query: 259 EVMP 262
E MP
Sbjct: 592 EEMP 595
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 102/181 (56%), Gaps = 3/181 (1%)
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE 189
S D + LI +YS C D+R VF+ + R++ WNA+ SG+++ + L ++ +
Sbjct: 489 SLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKD 548
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
L + LKP+ FTF VI A IA + G H KMGL D FV+N+L+ MY KC
Sbjct: 549 LQM-SRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCG 607
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
+EE K F +R++ WNS+I ++++G + ++ ++ +M+ EG P+ +T V +
Sbjct: 608 SIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMI--MEGVKPNYVTFVGL 665
Query: 310 L 310
L
Sbjct: 666 L 666
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 106/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC ++ ++H V F D + T LI Y+ G+ ++R +FD LK +
Sbjct: 160 VVRACTQLGNLSQALQLHGFV-VKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVK 218
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
W A+++G+ K L +F ++ + ++ PD + V+ AC + + G +
Sbjct: 219 TTVTWTAIIAGYAKLGRSEVSLKLFNQMR-EGDVYPDRYVISSVLSACSMLEFLEGGKQI 277
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + G DV V N +I Y KC V+ KLF + ++++VSW ++I G +N F
Sbjct: 278 HGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFH 337
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ DL ++M+ +G+ PD +VL
Sbjct: 338 GDAMDLFVEMV--RKGWKPDAFGCTSVL 363
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 97/190 (51%), Gaps = 2/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + +E GK++H V F D + +I Y C R++F+ L +
Sbjct: 261 VLSACSMLEFLEGGKQIHGYV-LRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDK 319
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +++G +N + D + +FVE+ KPD F V+ +CG + + G V
Sbjct: 320 DVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKG-WKPDAFGCTSVLNSCGSLQALQKGRQV 378
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K+ + D FV N LI MY KC + K+F+++ N+VS+N++I G+S
Sbjct: 379 HAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKL 438
Query: 283 CESFDLLIKM 292
E+ DL +M
Sbjct: 439 VEALDLFREM 448
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 101/195 (51%), Gaps = 4/195 (2%)
Query: 117 KRVHELVSASTQFSND-FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
K++H + +D F++NT L+ YS D++++FD++ RNL W+++VS +T
Sbjct: 71 KKIHAHIVVLGFHQHDVFLVNT-LLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYT 129
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
++ + L +F KP+ + V++AC + ++ +HG K G + DV
Sbjct: 130 QHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDV 189
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+V +LI Y K +V+E +F+ + + V+W +II G+++ G S S L +M
Sbjct: 190 YVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMR-- 247
Query: 296 EEGFIPDVITVVTVL 310
E PD + +VL
Sbjct: 248 EGDVYPDRYVISSVL 262
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 108/217 (49%), Gaps = 4/217 (1%)
Query: 74 CEESKSLNKALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSASTQFSN 131
C ++ A+ L E + +A G +L +CG + ++ G++VH + N
Sbjct: 331 CMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAY-AIKVNIDN 389
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + LI MY+ C ++R+VFD + N+ +NA++ G+++ + + L +F E+
Sbjct: 390 DDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMR 449
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
P TF ++ + + S +H + K G+ D F +ALI +Y KC+ V
Sbjct: 450 LSLS-PPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCV 508
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
+ +FE + +R++V WN++ G+S+ + ES L
Sbjct: 509 GDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKL 545
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G++ H V + F+ N+ L+ MY+ CG +S + F S R++ WN+++S +
Sbjct: 577 GQQFHNQVIKMGLDDDPFVTNS-LVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYA 635
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLIG 233
++ L +F + + +KP+ TF ++ AC G+ D+GF +K G+
Sbjct: 636 QHGDAAKALEVFERMIMEG-VKPNYVTFVGLLSACSHAGLLDLGFHH--FESMSKFGIEP 692
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSII 273
+ ++++ G+ + E + + MP + V W S++
Sbjct: 693 GIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLL 733
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 114/210 (54%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++++C ++GK+VH V Q SN + N+ L+ MY C D+ RVF+ + R
Sbjct: 168 VVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENS-LVEMYVKCDSLDDAHRVFEEMTER 226
Query: 163 N--LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ +F W A+VSG+ + Y D L F + ++PD + V+ C + + G
Sbjct: 227 DATIFSWTAIVSGYARIGCYADALEFFRRMQM-VGIEPDEISLVSVLPDCAQLGALELGK 285
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H A K G + ++ V NALI MY KC +++ +LF+ M ER+++SW+++I G + +G
Sbjct: 286 WIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIVGLANHG 345
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ +L +M + P +IT V +L
Sbjct: 346 RAREAIELFQEMQKAK--IEPSIITFVGLL 373
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 107/201 (53%), Gaps = 9/201 (4%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
K++H + + + F++ T+++ + + G + +F + N F +NA++ +
Sbjct: 76 KKIHAHIVKFSLSQSSFLV-TKMVDVCNHYGETEYANLLFKGVADPNAFLYNAMIRAYKH 134
Query: 177 NELYTDVLSIFVEL----SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
N++Y ++++ ++ + + PD FTFP V+K+C G+ G VHG K G
Sbjct: 135 NKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQK 194
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN--LVSWNSIICGFSENGFSCESFDLLI 290
+ V N+L+ MY KC +++ ++FE M ER+ + SW +I+ G++ G ++ +
Sbjct: 195 SNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDATIFSWTAIVSGYARIGCYADALEFFR 254
Query: 291 KMMGCEEGFIPDVITVVTVLP 311
+M G PD I++V+VLP
Sbjct: 255 RMQMV--GIEPDEISLVSVLP 273
>gi|225457865|ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
[Vitis vinifera]
Length = 711
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 109/218 (50%), Gaps = 7/218 (3%)
Query: 95 DLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSR 153
D+ T G++L C D+E GK+VH + +SN F+ N L+ MY CG +R
Sbjct: 391 DIDHVTVGLILNVCAGLSDVESGKQVHGFIYRHGLYSNLFVGNA-LLHMYGKCGNLRSTR 449
Query: 154 RVFDSLKT-RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
F + R+ WNAL++ ++ L + ++IF E+ +T P FT ++ AC
Sbjct: 450 LWFYQMSHWRDRISWNALLTSHARHGLSEEAMTIFGEMQWET--TPSKFTLGTLLSACAN 507
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
I + G +HG + G DV AL+ MY KC +E +K+F+ P R+L+ WNS+
Sbjct: 508 IFALEQGKQIHGFMIRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEAPSRDLILWNSM 567
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I G NG + L M EEG PD IT +L
Sbjct: 568 ILGCCHNGRGRDVLGLFGLME--EEGVKPDHITFQGIL 603
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 104/190 (54%), Gaps = 2/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +C + + K++H L+ F + I+ + L+ +Y C D+RR+FD ++
Sbjct: 167 VLGSCATVLALFLSKQIHGLI-VKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIENP 225
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WN +V + + + + +F ++ ++P NFTF + AC I+ + G +
Sbjct: 226 NAISWNVIVRRYLEMGNEKEAVVMFFKMIR-ANIRPLNFTFSNALIACSSISALQEGIQI 284
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+A ++G D VS++LI MY KC +E ++FE+ +NL+SW SI+ G++ +G +
Sbjct: 285 HGVAIRIGYDEDEVVSSSLIDMYAKCGDLESACRIFELPSSKNLISWTSIVSGYAMSGQT 344
Query: 283 CESFDLLIKM 292
E+ L +M
Sbjct: 345 REARVLFDEM 354
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 98/187 (52%), Gaps = 10/187 (5%)
Query: 107 CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQ 166
CG D+E R+ EL S S + I T +++ Y++ G ++R +FD + R++
Sbjct: 310 CG---DLESACRIFELPS-----SKNLISWTSIVSGYAMSGQTREARVLFDEMPERSVIS 361
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
WNA+++G+T + + L FV L D+ T ++ C G++DV G VHG
Sbjct: 362 WNAMLAGYTHFCQWEEALE-FVFLMRKATQDIDHVTVGLILNVCAGLSDVESGKQVHGFI 420
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE-RNLVSWNSIICGFSENGFSCES 285
+ GL ++FV NAL+ MYGKC + F M R+ +SWN+++ + +G S E+
Sbjct: 421 YRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRDRISWNALLTSHARHGLSEEA 480
Query: 286 FDLLIKM 292
+ +M
Sbjct: 481 MTIFGEM 487
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 2/191 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L Q C I ++V + + F++N R I Y C D+R +F+ + R
Sbjct: 66 LFQICSSNLAIVEARKVESHLITFSPAPPIFLLN-RAIETYGKCSCLDDARELFEEMPQR 124
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA+++ + + L +F ++ + + TF V+ +C + + +
Sbjct: 125 DGGSWNAMITAYAQGGCAEKALWLFSRMNR-LGIWANEITFASVLGSCATVLALFLSKQI 183
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ K G +V + ++L+ +YGKC + + ++F+ + N +SWN I+ + E G
Sbjct: 184 HGLIVKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIENPNAISWNVIVRRYLEMGNE 243
Query: 283 CESFDLLIKMM 293
E+ + KM+
Sbjct: 244 KEAVVMFFKMI 254
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 4/184 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G LL AC + +E GK++H + + D + L+ MYS C + +VF
Sbjct: 499 GTLLSACANIFALEQGKQIHGFM-IRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEAP 557
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+R+L WN+++ G N DVL +F L + +KPD+ TF ++ C G G+
Sbjct: 558 SRDLILWNSMILGCCHNGRGRDVLGLF-GLMEEEGVKPDHITFQGILLGCICEGLAGLGT 616
Query: 221 GV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSE 278
+ M+ K +I + ++I +YG+ F++E+ + MP E + + SE
Sbjct: 617 EYFNSMSNKYCIIPRLEHYESMIELYGRHGFMDELEDFIKRMPFEPTVAMLTRVFNACSE 676
Query: 279 NGFS 282
+G S
Sbjct: 677 HGHS 680
>gi|225216917|gb|ACN85213.1| EMB2261 putative [Oryza glaberrima]
Length = 615
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 112/210 (53%), Gaps = 6/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G ++ A G+ K ++ H V + + I+ + + MY+ CG +++R+VFD ++
Sbjct: 249 GSMMTALGNSKRGSQARQAHAQV-VTRGLCGNVIVESSTLDMYAKCGLMVEARKVFDRMQ 307
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
N AL+ G+ +N Y V+++F E+ + D ++ V++AC G++ V G
Sbjct: 308 VSNEVSRCALLGGYCQNGEYEKVIALFKEMDKE---DGDWYSLGTVLRACAGLSSVKPGK 364
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H +M DV V +AL+ +Y KC V+ +FE RN ++WN++I GF++NG
Sbjct: 365 EIHCRFLRMAGWRDVVVESALVDLYAKCGAVDYAYSVFEASTVRNTITWNAMIGGFAQNG 424
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L +M+ EG PD I+ + VL
Sbjct: 425 HGERAINLFNRMV--REGPRPDYISFIGVL 452
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 111/235 (47%), Gaps = 10/235 (4%)
Query: 81 NKALSLLQENLHNADLK-----EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
+AL+ L++ L AD A ++AC +D G +H V F +D ++
Sbjct: 122 RRALASLRDMLAGADDDVSPNAHALSAAVKACAVLRDRNAGACLHGSVLVRG-FGDDSVV 180
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
+ L+ MY P D+R+VF+ ++ + + +L+S F +N+ + + + F +
Sbjct: 181 LSSLVDMYGHVAAPGDARKVFEEMRAPDGICYTSLISAFVRNDWFEEAVRWFRSMLMMNG 240
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
++PD TF ++ A G H GL G+V V ++ + MY KC + E
Sbjct: 241 VRPDGCTFGSMMTALGNSKRGSQARQAHAQVVTRGLCGNVIVESSTLDMYAKCGLMVEAR 300
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F+ M N VS +++ G+ +NG E L K M E+G D ++ TVL
Sbjct: 301 KVFDRMQVSNEVSRCALLGGYCQNG-EYEKVIALFKEMDKEDG---DWYSLGTVL 351
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA-FVEEMVKLFEVMPERNLVSWNSIICGF 276
G +HG AA+ GL+ D +++NAL+A Y + + ++ F+ +P R++V+ +SI+ F
Sbjct: 56 LGCCLHGRAARAGLLADRYLANALLAFYVRLPRHLPHALRAFDDLPRRDVVAHSSILAAF 115
Query: 277 SENGFSCESFDLLIKMM-GCEEGFIPDV 303
G + L M+ G ++ P+
Sbjct: 116 LRAGMPRRALASLRDMLAGADDDVSPNA 143
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 130/236 (55%), Gaps = 13/236 (5%)
Query: 82 KALSLLQENLHNA---DLKEATGVLLQ-ACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
KAL+L ++ +H D+ VL +C +D+ G + H + T F+ + + +
Sbjct: 224 KALALYRDMVHRGFEIDMFTLASVLTTFSC--VEDLSGGLQFHA-KAIKTGFNKNRHVGS 280
Query: 138 RLITMYSLCGFPL-DSRRVFDSLKTRNLFQWNALVSGFTKN-ELYTDVLSIFVELSSDTE 195
LI MY+ CG + +SR+VF+ + +L WN ++SG+++N EL + L F ++
Sbjct: 281 GLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQR-AG 339
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD-VFVSNALIAMYGKCAFVEEM 254
PD+ +F C I AC ++ G H +A K + + + V+NAL+ MY KC +++
Sbjct: 340 YWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDA 399
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
KLF+ MP+ N V+ NSII G++++G ES +L +M+ P IT+V++L
Sbjct: 400 RKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAA--SIAPTSITLVSIL 453
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 107/246 (43%), Gaps = 49/246 (19%)
Query: 103 LLQACGHEKDIEIGKRVH-----ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
+L++C KD+ GK +H L+ +ST SN FI+ +YS C + F+
Sbjct: 14 ILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFIL------LYSKCNLLTTAHHAFN 67
Query: 158 SLKTRNLFQWNALVSGFTKNEL-------------------------YTD------VLSI 186
N+F +NAL++ + K L Y D LS+
Sbjct: 68 QTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSL 127
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
F E+ + L D FTF VI AC VG +H +A G V V N+L+ Y
Sbjct: 128 FGEMR-EMGLVMDGFTFSGVITAC--CNHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYS 184
Query: 247 KCAFVEEMVKLFEVMPE--RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVI 304
K +EE +F M E R+ VSWNS+I + ++ ++ L M+ GF D+
Sbjct: 185 KNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMV--HRGFEIDMF 242
Query: 305 TVVTVL 310
T+ +VL
Sbjct: 243 TLASVL 248
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 33/140 (23%)
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC------------- 248
+F ++K+C D+ G +H + K + ++SN I +Y KC
Sbjct: 10 SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69
Query: 249 -------------AFVEEMV-----KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
A+ +E + LF+ +P+ +LVS+N++I +++ G + + L
Sbjct: 70 HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFG 129
Query: 291 KMMGCEEGFIPDVITVVTVL 310
+M E G + D T V+
Sbjct: 130 EMR--EMGLVMDGFTFSGVI 147
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 105/182 (57%), Gaps = 10/182 (5%)
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
I++T +T Y+LCG +R++FD + +L +N ++ + ++ LY D +++F+ + S+
Sbjct: 51 ILSTLSVT-YALCGHIAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSE 109
Query: 194 -TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ PD +T+P V KA G + + G +HG + D +V NAL+AMY VE
Sbjct: 110 GIKCVPDGYTYPFVAKAAGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVE 169
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCES---FDLLIKMMGCEEGFIPDVITVVTV 309
+F+VM R+++SWN++I G+ NG+ ++ FD ++ EG PD T+V++
Sbjct: 170 MARNVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVN-----EGVDPDHATIVSM 224
Query: 310 LP 311
LP
Sbjct: 225 LP 226
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 110/218 (50%), Gaps = 5/218 (2%)
Query: 95 DLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSR 153
D AT V +L CGH K +E+G+ VH+LV + + + L+ MY CG ++R
Sbjct: 215 DPDHATIVSMLPVCGHLKGLEMGRNVHKLVE-EKRLGDKIEVKNALVNMYLKCGRMDEAR 273
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
VF ++ R++ W +++G+ ++ + L + L ++P+ T ++ ACG
Sbjct: 274 FVFGRMERRDVITWTCMINGYIEDGDVENALEL-CRLMQFEGVRPNAVTIASLVSACGDA 332
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
+ G +HG A + + D+ + +LI+MY KC ++ ++F + W++II
Sbjct: 333 LKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAII 392
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G +N ++ DL +M E P++ T+ ++LP
Sbjct: 393 AGCVQNELVRDALDLFKRMR--REDVEPNIATLNSLLP 428
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 4/206 (1%)
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNL 164
+A G K I +G +H + S F D + L+ MY G +R VFD +K R++
Sbjct: 125 KAAGELKSISLGLVIHGRILRS-WFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDV 183
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
WN ++SG+ +N D L +F + + + PD+ T ++ CG + + G VH
Sbjct: 184 ISWNTMISGYYRNGYMNDALMMF-DWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHK 242
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCE 284
+ + L + V NAL+ MY KC ++E +F M R++++W +I G+ E+G E
Sbjct: 243 LVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDG-DVE 301
Query: 285 SFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L ++M EG P+ +T+ +++
Sbjct: 302 NALELCRLMQF-EGVRPNAVTIASLV 326
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 8/212 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ ACG + GK +H + + +D II T LI+MY+ C RVF
Sbjct: 325 LVSACGDALKLNDGKCLHGW-AIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRN 383
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W+A+++G +NEL D L +F + + +++P+ T ++ A +AD+ +
Sbjct: 384 HTGPWSAIIAGCVQNELVRDALDLFKRMRRE-DVEPNIATLNSLLPAYATLADLRQTMNI 442
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE----RNLVSWNSIICGFSE 278
H K G + + + L+ +Y KC +E K+F + E +++V W ++I G+
Sbjct: 443 HCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGM 502
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+G + + ++M+ G P+ IT + L
Sbjct: 503 HGDGHNALQVFMEMV--RSGVTPNEITFTSAL 532
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 12/241 (4%)
Query: 76 ESKSLNKALSLLQENLH-NADLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
E+ S +AL L +E + N E T V +L AC + +E+G++VH + SN
Sbjct: 175 ETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLK 234
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
I+N LI +YS CG + +F+ L +++ WN L+ G+T LY + L +F E+
Sbjct: 235 IVNA-LIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRS 293
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF----VSNALIAMYGKCA 249
E P++ T ++ AC + + G +H K + DV + +LI MY KC
Sbjct: 294 GE-SPNDVTIVSILPACAHLGAIDIGRWIHVYIDKK--LKDVTNAPSLRTSLIDMYAKCG 350
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
+E ++F M ++L SWN++I GF+ +G + FDL +M + G PD IT V +
Sbjct: 351 DIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMR--KNGIEPDDITFVGL 408
Query: 310 L 310
L
Sbjct: 409 L 409
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 113/240 (47%), Gaps = 35/240 (14%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD----- 157
LL++C K E G+++H V + D ++T LI+MY+ G D+ +VFD
Sbjct: 72 LLKSCAKSKAFEEGQQIHGHV-LKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHR 130
Query: 158 --------------------------SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ +++ WNA++SG+ + Y + L +F E+
Sbjct: 131 DVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMM 190
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
T ++PD T V+ AC V G VH G ++ + NALI +Y KC V
Sbjct: 191 K-TNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQV 249
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E LFE + +++VSWN++I G++ E+ L +M+ G P+ +T+V++LP
Sbjct: 250 ETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEML--RSGESPNDVTIVSILP 307
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 35/195 (17%)
Query: 147 GFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCV 206
GFP + VF +++ N WN ++ G+ + L ++V + S L P+++TFP +
Sbjct: 15 GFPY-AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMIS-LGLLPNSYTFPFL 72
Query: 207 IKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK---------- 256
+K+C G +HG K+G D++V +LI+MY + +E+ K
Sbjct: 73 LKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDV 132
Query: 257 ---------------------LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+F+ +P +++VSWN++I G++E G E+ +L +MM
Sbjct: 133 VSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMM-- 190
Query: 296 EEGFIPDVITVVTVL 310
+ PD T+VTVL
Sbjct: 191 KTNVRPDEGTMVTVL 205
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 133/279 (47%), Gaps = 44/279 (15%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADL-KEATGV--LLQACGHEKDIEIGKRVH-ELVSA 125
++ L ++L+ +L++ +H+ +ATGV L A G K++ +GK+VH +V A
Sbjct: 125 VSGLNRSGRALDAVTALVR--MHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKA 182
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
+ D + T LI MY CG + RVF ++ NALV+G ++N ++ L
Sbjct: 183 GCRL--DACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALL 240
Query: 186 IFVEL----------------------SSDTE------------LKPDNFTFPCVIKACG 211
+F E D E ++P++ T PCV+ A
Sbjct: 241 LFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFA 300
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
+A + G H + + G + DV+V +AL+ MY KC +F+ MP RN+VSWN+
Sbjct: 301 NVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNA 360
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+I G++ +G + + L M C++ PD++T VL
Sbjct: 361 MIGGYAMHGDAANAVQLFCSMQKCKQK--PDLVTFTCVL 397
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 75/184 (40%), Gaps = 38/184 (20%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN LVSG ++ D ++ V + S+ PD C + A G + +V G V
Sbjct: 117 NVITWNGLVSGLNRSGRALDAVTALVRMHSEG-FFPDATGVSCALSAVGDVKEVSVGKQV 175
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-------------------- 262
HG K G D V ALI MYGKC +E+V++F
Sbjct: 176 HGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQV 235
Query: 263 ---------------ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
E N+VSW SI+ +NG E+ DL M G P+ +T+
Sbjct: 236 SEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSI--GVEPNSVTIP 293
Query: 308 TVLP 311
VLP
Sbjct: 294 CVLP 297
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 17/154 (11%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F +D + + L+ MY+ CG +R +FD++ +RN+ WNA++ G+ + + + +F
Sbjct: 320 FLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFC 379
Query: 189 ELSSDTELKPDNFTFPCVIKAC--GGIADVG------FGSGVHGMAAKMGLIGDVFVSNA 240
+ + KPD TF CV+ AC G+ + G G HG++ +M
Sbjct: 380 SMQK-CKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQG-HGISPRMEHYA------C 431
Query: 241 LIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
++ + G+ ++E L MP E + W S++
Sbjct: 432 MVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLL 465
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
PD P +K+C +H A GL D FV+++L+ Y + +
Sbjct: 18 PDPHLLPSALKSCPAQP---LARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSV 74
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
F+ MPE+N+V W+++I G+S G + ++ LL +M G P+VIT
Sbjct: 75 FDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMR--SAGVEPNVIT 120
>gi|297844244|ref|XP_002890003.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335845|gb|EFH66262.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 471
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 89/158 (56%), Gaps = 3/158 (1%)
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
RVFD + RN+F WN L+ G+ +N ++VL F + + + P++ T V+ AC +
Sbjct: 139 RVFDEMLERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVFPNDATLTLVLSACAKL 198
Query: 214 ADVGFGSGVHGMAAKMGLIG-DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
FG VH +G DV V NALI MYGKC +E +++F+ + R+L+SWN++
Sbjct: 199 GAFDFGKRVHKYGENLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTM 258
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I G + +G E+ DL +M C G PD +T V VL
Sbjct: 259 INGLAAHGHGTEALDLFHEMKNC--GISPDKVTFVGVL 294
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 3/174 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++L AC + GKRVH+ D + LI MY CG + VF +K
Sbjct: 190 LVLSACAKLGAFDFGKRVHKYGENLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKR 249
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG-S 220
R+L WN +++G + T+ L +F E+ + + PD TF V+ AC + V G +
Sbjct: 250 RDLISWNTMINGLAAHGHGTEALDLFHEM-KNCGISPDKVTFVGVLCACKHMGLVEDGLA 308
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSII 273
+ M + + ++ + + F+ + V+ MP + + V W +++
Sbjct: 309 YFNSMFTDFSITPQIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLL 362
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 47/194 (24%)
Query: 122 LVSASTQF----SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKN 177
+VSA+ F + +I T +I Y L + +RR FD R++ WN +V+G+ +
Sbjct: 41 MVSANKVFCEMVEKNVVIWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMVAGYIEM 100
Query: 178 ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFV 237
+ S+F ++ PC DV
Sbjct: 101 GNMMEARSLFDQM-------------PC---------------------------RDVMS 120
Query: 238 SNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEE 297
N ++ Y +E ++F+ M ERN+ SWN +I G+++NG E +M+ +E
Sbjct: 121 WNTVLEGYANIGDMEACERVFDEMLERNVFSWNGLIKGYAQNGRVSEVLGSFKRMV--DE 178
Query: 298 GFI-PDVITVVTVL 310
G + P+ T+ VL
Sbjct: 179 GSVFPNDATLTLVL 192
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 105/195 (53%), Gaps = 4/195 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+++H + D ++ LI MYS CG D+ VFD + + + WN++++G+
Sbjct: 252 GRQLHS-CAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYA 310
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+ + L ++ E+ D+ +K D+FTF +I+ C +A V VH + G DV
Sbjct: 311 LHGYSEEALDLYHEMR-DSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDV 369
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+ AL+ Y K V++ +F+ M RN++SWN++I G+ +G E+ D+ KM+
Sbjct: 370 VANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKML-- 427
Query: 296 EEGFIPDVITVVTVL 310
EG +P+ +T + VL
Sbjct: 428 REGMMPNHVTFLAVL 442
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 104/192 (54%), Gaps = 4/192 (2%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
L+ AC K I KR+ + F D + R++ M+ CG +D+ R+FD +
Sbjct: 137 ALINACIGLKSIRGVKRLCNYM-VDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEMPA 195
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSD-TELKPDNFTFPCVIKACGGIADVGFGS 220
RN W ++SG+ + Y + +F+ + + + P TF +I+A G+ + G
Sbjct: 196 RNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPR--TFATMIRASAGLEIIFPGR 253
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H A K GL D+FVS ALI MY KC +E+ +F+ MP++ +V WNSII G++ +G
Sbjct: 254 QLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHG 313
Query: 281 FSCESFDLLIKM 292
+S E+ DL +M
Sbjct: 314 YSEEALDLYHEM 325
>gi|297819530|ref|XP_002877648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323486|gb|EFH53907.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 786
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 93/157 (59%), Gaps = 3/157 (1%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VFD + RN+ N ++ + N Y + + +FV + S +KPD++TFPCV+KAC
Sbjct: 1 VFDEIPERNVIIINVMIRSYVNNGFYREGIQVFVTMCS-CHVKPDHYTFPCVLKACSCSG 59
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
++ G +HG A K+GL +FV N L++MYGKC F+ E + + M R++VSWNS++
Sbjct: 60 NIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVA 119
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G+++N ++ ++ +M + D T+ ++LP
Sbjct: 120 GYAQNQRFDDALEVCREMESVK--ISHDAGTMASLLP 154
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
+ +F + ++L WN ++ + KN + + + ++ + +D +PD + V+ ACG
Sbjct: 168 KDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADG-FEPDAVSITSVLPACGD 226
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
+ + G +HG + LI ++ + NALI MY KC ++ +FE M R++VSW ++
Sbjct: 227 TSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAM 286
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I + +G C++ L KM + G +PD I VT L
Sbjct: 287 ISAYGFSGRGCDAVALFSKMQ--DSGLVPDSIAFVTTL 322
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG + +GK++H + N ++ LI MY+ CG +R VF+++K+R
Sbjct: 220 VLPACGDTSALSLGKKIHGYIERKKLIPN-LLLENALIDMYAKCGCLDRARDVFENMKSR 278
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
++ W A++S + + D +++F ++ D+ L PD+ F + AC
Sbjct: 279 DVVSWTAMISAYGFSGRGCDAVALFSKM-QDSGLVPDSIAFVTTLAAC 325
>gi|255540955|ref|XP_002511542.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550657|gb|EEF52144.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 434
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 106/190 (55%), Gaps = 2/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL C D+E+G R+ + + + N I++T ++ MY CG D+R+ FD + R
Sbjct: 234 LLSICAKLGDLEMGLRIKKYIEDNNLCVN-MIVSTAILEMYVKCGAVDDARKEFDRMGQR 292
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+A+++G+ +N + L +F E ++KP++ T V+ AC + V G+ +
Sbjct: 293 DIVAWSAMIAGYAQNGRSNEALELF-ECMRREKVKPNDVTLVSVLSACVQLGSVEMGNYI 351
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
L +V+V++AL+ MY KC + + ++F P++++V+WNS+I G + NGF+
Sbjct: 352 GSYVESQDLASNVYVASALVGMYSKCGNISKAREVFGKTPQKDIVTWNSMIVGLAVNGFA 411
Query: 283 CESFDLLIKM 292
++ L M
Sbjct: 412 KDAIALYRNM 421
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 126/254 (49%), Gaps = 36/254 (14%)
Query: 90 NLHNADLKEA--TGV-LLQACGHEKDIEIGKRVHELV----------------------- 123
++H++D + + TG +++AC I++GK+VH L+
Sbjct: 86 SMHHSDTRLSCFTGPPVIKACSSLLAIDVGKQVHSLIVICGIDCNVYVQTSLMDFYAKIG 145
Query: 124 ---SASTQFS----NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
SA F D I LIT YS G + +RR+FDS+ R + WNA++S +
Sbjct: 146 ELGSARKIFDGILVKDPISYNCLITGYSKAGDVIAARRLFDSMTERTVVSWNAMISCYAH 205
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF 236
N + L F + ++ ++ P+ T ++ C + D+ G + L ++
Sbjct: 206 NGDLNEGLKTFERMQAE-DISPNEITLVTLLSICAKLGDLEMGLRIKKYIEDNNLCVNMI 264
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCE 296
VS A++ MY KC V++ K F+ M +R++V+W+++I G+++NG S E+ +L M
Sbjct: 265 VSTAILEMYVKCGAVDDARKEFDRMGQRDIVAWSAMIAGYAQNGRSNEALELFECMR--R 322
Query: 297 EGFIPDVITVVTVL 310
E P+ +T+V+VL
Sbjct: 323 EKVKPNDVTLVSVL 336
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 85/191 (44%), Gaps = 36/191 (18%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL-SSDTELKPDNFTFPCVIKAC 210
+R++FD + +N+L+S ++K L+ D L F + SDT L FT P VIKAC
Sbjct: 49 ARQLFDQVPQPGQILYNSLISTYSKLSLHKDALKTFFSMHHSDTRLSC--FTGPPVIKAC 106
Query: 211 GGIADVGFGSGVHGMA-------------------AKMG------------LIGDVFVSN 239
+ + G VH + AK+G L+ D N
Sbjct: 107 SSLLAIDVGKQVHSLIVICGIDCNVYVQTSLMDFYAKIGELGSARKIFDGILVKDPISYN 166
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
LI Y K V +LF+ M ER +VSWN++I ++ NG E +M E
Sbjct: 167 CLITGYSKAGDVIAARRLFDSMTERTVVSWNAMISCYAHNGDLNEGLKTFERMQA--EDI 224
Query: 300 IPDVITVVTVL 310
P+ IT+VT+L
Sbjct: 225 SPNEITLVTLL 235
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 113/207 (54%), Gaps = 6/207 (2%)
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNL 164
+ACG + ++GK VH L + T + D + + L+ MY+ CG D+R +FD + RN+
Sbjct: 134 KACGFLRRSDVGKSVHCL-AVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNV 192
Query: 165 FQWNALVSGFTKNELYTDVLSIFVE-LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
W+ ++ G+ + + + L++F + L D ++ ++FTF VI+ C + G +H
Sbjct: 193 VSWSGMIYGYAQLDDGVEALTLFKQALIEDVDV--NDFTFSSVIRVCSSSTFLELGKLIH 250
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G+ KM FV +ALI++Y KC +E ++F+ +P RNL WNS++ +++ +
Sbjct: 251 GLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQ 310
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
F L +M G P+ I ++VL
Sbjct: 311 RVFGLFEEMGNV--GMKPNFIXFLSVL 335
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 7/170 (4%)
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
+++ LI +YS PL S +VFD ++ W++++S F +NE L F + +D
Sbjct: 61 LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND 120
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
++PD+ +P KACG + G VH +A K G DVFV ++L+ MY KC + +
Sbjct: 121 G-VRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGD 179
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
LF+ MPERN+VSW+ +I G+++ E+ L ++ I DV
Sbjct: 180 ARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLF------KQALIEDV 223
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 5/197 (2%)
Query: 82 KALSLLQENL-HNADLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
+AL+L ++ L + D+ + T +++ C +E+GK +H L F + + + L
Sbjct: 210 EALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLC-LKMSFDSSSFVGSAL 268
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
I++YS CG + +VFD + TRNL WN+++ ++ V +F E+ + +KP+
Sbjct: 269 ISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMG-NVGMKPN 327
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
F V+ AC V G + G+ + +L+ + G+ ++E V + +
Sbjct: 328 FIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIK 387
Query: 260 VMPERNLVS-WNSIICG 275
MP R S W +++ G
Sbjct: 388 QMPMRPTESVWGALLTG 404
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G +H K GL VS+ LI +Y K +++F+ P+++ +W+S+I F++
Sbjct: 44 GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ 103
Query: 279 NGFSCESFDLLIKMMGCEEGFIPD 302
N + +M+ +G PD
Sbjct: 104 NEAPLLALQFFRRML--NDGVRPD 125
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 114/207 (55%), Gaps = 3/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L++C + ++GK VH + + D + L+ +Y+ G ++++ F+ + +
Sbjct: 212 LKSCNGLEAFKVGKSVHG-CALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDD 270
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L W+ ++S + +++ + L +F + + + P+NFTF V++AC + + G+ +H
Sbjct: 271 LIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIH 330
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
K+GL +VFVSNAL+ +Y KC +E VKLF E+N V+WN+II G+ + G
Sbjct: 331 SCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGE 390
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L M+G + P +T +VL
Sbjct: 391 KALNLFSNMLGLD--IQPTEVTYSSVL 415
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 96/179 (53%), Gaps = 2/179 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + T LI YS+CG +R+VFD + +++ W +V+ + +N + D L +F ++
Sbjct: 138 DAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMR 197
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+P+NFT +K+C G+ G VHG A K+ D++V AL+ +Y K +
Sbjct: 198 I-MGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEI 256
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E + FE MP+ +L+ W+ +I ++++ S E+ +L +M +P+ T +VL
Sbjct: 257 AEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQ-SSVVVPNNFTFASVL 314
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 106/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQAC + +G ++H V SN F+ N L+ +Y+ CG +S ++F +
Sbjct: 313 VLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNA-LMDVYAKCGEIENSVKLFTGSTEK 371
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WN ++ G+ + L++F + +++P T+ V++A + + G +
Sbjct: 372 NEVAWNTIIVGYVQLGDGEKALNLFSNMLG-LDIQPTEVTYSSVLRASASLVALEPGRQI 430
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + K D V+N+LI MY KC +++ F+ M +++ VSWN++ICG+S +G
Sbjct: 431 HSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLG 490
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L M + P+ +T V VL
Sbjct: 491 MEALNLFDMMQ--QSNSKPNKLTFVGVL 516
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQ +D GK +H + S D L+ Y GF D+ ++FD +
Sbjct: 9 MLQQAIRNRDPNAGKSLHCHILKHGA-SLDLFAQNILLNTYVHFGFLEDASKLFDEMPLT 67
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N + L GF+++ + + + L + + + F F ++K + V
Sbjct: 68 NTVSFVTLAQGFSRSHQFQRARRLLLRLFREG-YEVNQFVFTTLLKLLVSMDLADTCLSV 126
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K+G D FV ALI Y C V+ ++F+ + +++VSW ++ ++EN
Sbjct: 127 HAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAEN--Y 184
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
C LL+ G+ P+ T+ L
Sbjct: 185 CHEDSLLLFCQMRIMGYRPNNFTISAAL 212
>gi|296087773|emb|CBI35029.3| unnamed protein product [Vitis vinifera]
Length = 1596
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 114/209 (54%), Gaps = 3/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC + + +GK++H V + S+D + T L+ Y+ C D+R++FD +
Sbjct: 111 IISACTNSLWMLLGKQIHNWVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNL 170
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ QWN L++G+ + L + L+ F + + ++PD F +K C + + G +
Sbjct: 171 DVVQWNVLLNGYVRRGLAPEALNAFRNMLV-SGVEPDEFCLTTALKGCAQLGALQQGKWI 229
Query: 223 HGMAAKMG-LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
H K L DVF+ AL+ MY KC ++ V++FE M +RN+ SW+++I GF+ +G
Sbjct: 230 HEYVTKRKWLEADVFIGTALVDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIGGFALHGH 289
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M E+G PD + ++ V+
Sbjct: 290 VRKAMQCLERMQ-VEDGLRPDGVVLLGVI 317
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 9/211 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC--GFPLDSRRVFDSLK 160
L Q+C + + K +H L + N++ I ++LI+ +L G + +F ++
Sbjct: 10 LAQSCSNMRQF---KAIHALFIVNGLHLNNYAI-SKLISFCALSNSGSLSYASLIFSQIQ 65
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
NLF +N L+ ++++ L F + D + PD TFP +I AC + G
Sbjct: 66 NPNLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFIISACTNSLWMLLGK 125
Query: 221 GVHGMAAKMGLI-GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H K G+ D V AL+ Y +C + + KLF+ +P ++V WN ++ G+
Sbjct: 126 QIHNWVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDVVQWNVLLNGYVRR 185
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + E+ + M+ G PD + T L
Sbjct: 186 GLAPEALNAFRNMLV--SGVEPDEFCLTTAL 214
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 4/175 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+ C ++ GK +HE V+ D I T L+ MY+ CG S VF+ + RN
Sbjct: 214 LKGCAQLGALQQGKWIHEYVTKRKWLEADVFIGTALVDMYAKCGCIDRSVEVFEGMTKRN 273
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGSG 221
+F W+A++ GF + + + + L+PD VI AC G+ + G
Sbjct: 274 VFSWSAMIGGFALHGHVRKAMQCLERMQVEDGLRPDGVVLLGVIMACAHAGLQEEG-QFL 332
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS-WNSIICG 275
+ M A+ G++ + ++ + + ++E +KL MP + + W +++ G
Sbjct: 333 LENMEARYGILPKHEHYSCMVDLLCRAGQLDEALKLIRRMPMKPRAAVWGALLSG 387
>gi|222619002|gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japonica Group]
Length = 493
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 124/232 (53%), Gaps = 5/232 (2%)
Query: 81 NKAL-SLLQENLHNADLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
NKAL S Q L E T + +L AC +++G H LV + F + I +
Sbjct: 90 NKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNG-FEINCYIGSS 148
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L++MY+ CG ++RRVF+ + RN+ W ++++G T++ + + + +F ++ +K
Sbjct: 149 LVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQI-AGVKA 207
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D+ T V+ +CG + + G +H GL ++ V N+LI MY KC V + ++F
Sbjct: 208 DDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIF 267
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +R++ +W +I GF+ NG E+ DL +M G E+ +P+ + + VL
Sbjct: 268 HGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEG-EDKVMPNEVIFLGVL 318
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 108/211 (51%), Gaps = 6/211 (2%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK- 160
+ + A +++G + H L + S+ F++N LI MYS C +P +R V DS
Sbjct: 10 IAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNA-LINMYSSCNYPASARLVLDSAPR 68
Query: 161 -TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
++ WN +++G+ + + L F +++ + +++ D T V+ AC + G
Sbjct: 69 WASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKE-QVRLDEVTLLNVLVACARTGAMKVG 127
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
S H + G + ++ ++L++MY KC VEE ++F MPERN+V W S+I G +++
Sbjct: 128 SLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQS 187
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ DL M G D T+ TV+
Sbjct: 188 GRFKEAVDLFRDMQ--IAGVKADDATIATVV 216
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 96/205 (46%), Gaps = 7/205 (3%)
Query: 74 CEESKSLNKALSLLQE-NLHNADLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSN 131
C +S +A+ L ++ + +AT ++ +CG +++G+ +H
Sbjct: 184 CTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHG-LGK 242
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ + LI MYS CG + ++F L R++F W ++ GF N L + L +F ++
Sbjct: 243 ELSVKNSLIDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQME 302
Query: 192 SDTELKPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
+ ++ P+ F V+ AC GG+ + G+ H M+ L+ + ++ + G+
Sbjct: 303 GEDKVMPNEVIFLGVLTACSHGGLVEQGY-HHFHRMSKVYNLVPRIEHYGCMVDLLGRAK 361
Query: 250 FVEEMVKLFEVMP-ERNLVSWNSII 273
+ E + + MP ++V W S++
Sbjct: 362 LLAEAEQFIKDMPVAPDVVVWRSLL 386
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
DN++ I A + + GS H ++ K+ L D FV NALI MY C + +
Sbjct: 4 DNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVL 63
Query: 259 EVMPE--RNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ P ++VSWN+II G+ G ++ +M +E D +T++ VL
Sbjct: 64 DSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQM--AKEQVRLDEVTLLNVL 115
>gi|302795326|ref|XP_002979426.1| hypothetical protein SELMODRAFT_110980 [Selaginella moellendorffii]
gi|300152674|gb|EFJ19315.1| hypothetical protein SELMODRAFT_110980 [Selaginella moellendorffii]
Length = 342
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 115/209 (55%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+Q CG K IE G+RVH + N F+ N LI MY CG ++R FDS+ +
Sbjct: 29 LIQCCGAAKAIEEGRRVHRHLLRYGYGGNTFLGNL-LIQMYRQCGSMEEARSTFDSMAKK 87
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA+VSG+++ + L ++ + S+ ++P+ T V+ ACG + G V
Sbjct: 88 DVVSWNAMVSGYSQAGQGREALDLYQRMDSEG-VEPNRVTLLGVLGACGNSQLLAEGRSV 146
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSENGF 281
H D+ + AL+ MY +C ++E K+F+ + + NLVSW ++I GF+++G
Sbjct: 147 HSRIRSSRRESDLSLEAALVTMYARCGSLQEAEKVFDGISRKNNLVSWTAMIVGFAKHGH 206
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ ++ +M +G PD +T +T+L
Sbjct: 207 AEEAMEMYRRME--LDGAEPDDVTFITIL 233
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 203 FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ +I+ CG + G VH + G G+ F+ N LI MY +C +EE F+ M
Sbjct: 26 YASLIQCCGAAKAIEEGRRVHRHLLRYGYGGNTFLGNLLIQMYRQCGSMEEARSTFDSMA 85
Query: 263 ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++++VSWN+++ G+S+ G E+ DL +M EG P+ +T++ VL
Sbjct: 86 KKDVVSWNAMVSGYSQAGQGREALDLYQRMD--SEGVEPNRVTLLGVL 131
>gi|255557445|ref|XP_002519753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541170|gb|EEF42726.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 562
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 115/209 (55%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + D +G +VH VS S++FI + LIT YS C ++ +VF+ ++
Sbjct: 304 VLTACANAMDFNMGVQVHGRVSKLGYKSDEFI-SASLITFYSNCKQVKNAHQVFNETLSK 362
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W AL++G N + D L +F ++ + P+ TF +C G+ + G +
Sbjct: 363 NVVIWTALLTGCELNSKHEDALRVFSDMIK-MGVFPNQSTFISAFNSCRGLEALDRGKEI 421
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + AK+GL DVFV N+L+ MY +C V + V +F+ + E+N VSWNSII G S++G
Sbjct: 422 HTVTAKLGLETDVFVGNSLVVMYNECGNVNDAVAVFKKIKEKNDVSWNSIIVGSSQHGHG 481
Query: 283 CESFDLLIKMM-GCEEGFIPDVITVVTVL 310
+ +M+ C + PD IT+ +L
Sbjct: 482 IWALIFFNQMIRTCVD---PDEITLTGLL 507
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 9/163 (5%)
Query: 151 DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
D +F+ + RN+ W +++ G +N + L +F ++ D+ +KP + T+ CV+ AC
Sbjct: 250 DGLNLFEKMPCRNVISWTSMIGGLDQNGKSEEALILFGKMM-DSGVKPTSTTYACVLTAC 308
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
D G VHG +K+G D F+S +LI Y C V+ ++F +N+V W
Sbjct: 309 ANAMDFNMGVQVHGRVSKLGYKSDEFISASLITFYSNCKQVKNAHQVFNETLSKNVVIWT 368
Query: 271 SIICGF---SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+++ G S++ + F +IKM G P+ T ++
Sbjct: 369 ALLTGCELNSKHEDALRVFSDMIKM-----GVFPNQSTFISAF 406
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 64/165 (38%), Gaps = 42/165 (25%)
Query: 146 CGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPC 205
CG +RR+FD + RN+ W +V+G+ K F ++
Sbjct: 183 CGDLGMARRLFDEMPERNVVSWTTMVNGYLKFGRVEIAERFFWDMP-------------- 228
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
+ DV NA+I Y + + + LFE MP RN
Sbjct: 229 --------------------------VRDVAAWNAMIFGYCGNRRIADGLNLFEKMPCRN 262
Query: 266 LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++SW S+I G +NG S E+ L KMM + G P T VL
Sbjct: 263 VISWTSMIGGLDQNGKSEEALILFGKMM--DSGVKPTSTTYACVL 305
>gi|255540507|ref|XP_002511318.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550433|gb|EEF51920.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 441
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 128/235 (54%), Gaps = 6/235 (2%)
Query: 78 KSLNKALSLLQENLHNA-DLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
+S KAL+ ++ L A E T L+AC + + GK++H + SN ++
Sbjct: 105 RSPQKALAFFKQMLEEAVAFDEFTFPCTLKACSRLRGRKEGKQIHAQIVKYGFGSNCIVL 164
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
NT LI MY+ CG +R +FD + R++F WN++ SG+ K+ Y D + +F E+ +
Sbjct: 165 NT-LIHMYANCGEIEIARNMFDGMSERDIFAWNSMFSGYVKSGYYEDTVRLFEEMR-ELG 222
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
+ ++ T V+ ACG +ADV G + GL ++ + AL+ MY KC V++
Sbjct: 223 VGFNDITLISVLAACGRLADVELGEWIAKYVRVNGLDRNMNLVTALVDMYAKCGEVDKAR 282
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+LF+ M R++V+W+++I G+S+ E+ DL +M P+ +T+V+VL
Sbjct: 283 RLFDQMDGRDVVAWSAMISGYSQARRCQEAVDLFNEMQMA--NLDPNEVTMVSVL 335
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 99/178 (55%), Gaps = 2/178 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG D+E+G+ + + V + N ++ T L+ MY+ CG +RR+FD + R
Sbjct: 233 VLAACGRLADVELGEWIAKYVRVNGLDRNMNLV-TALVDMYAKCGEVDKARRLFDQMDGR 291
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+A++SG+++ + + +F E+ L P+ T V+ C + +G G +
Sbjct: 292 DVVAWSAMISGYSQARRCQEAVDLFNEMQM-ANLDPNEVTMVSVLSCCAALGALGTGKWI 350
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H + G+ V + AL+ YGKC V+ +++F++MP +N+ SW ++I G + NG
Sbjct: 351 HLYIKRKGMNLTVTLGTALVDFYGKCGLVDSAIEVFQLMPVKNVYSWTALIQGLANNG 408
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 3/156 (1%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
+FD++ + +N ++ FT L+ F ++ + + D FTFPC +KAC +
Sbjct: 82 IFDNIDGPDSSAYNIMIRAFTLKRSPQKALAFFKQMLEEA-VAFDEFTFPCTLKACSRLR 140
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
G +H K G + V N LI MY C +E +F+ M ER++ +WNS+
Sbjct: 141 GRKEGKQIHAQIVKYGFGSNCIVLNTLIHMYANCGEIEIARNMFDGMSERDIFAWNSMFS 200
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G+ ++G+ ++ L +M GF + IT+++VL
Sbjct: 201 GYVKSGYYEDTVRLFEEMRELGVGF--NDITLISVL 234
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 118/239 (49%), Gaps = 34/239 (14%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L++AC ++ GK+VH S S+D ++ + L+ MY+ CG P R VFDS+ ++
Sbjct: 111 LVKACAILGAMKQGKQVHATFIVSP-VSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSK 169
Query: 163 N----------------------LFQ---------WNALVSGFTKNELYTDVLSIFVELS 191
N LFQ W AL+SG ++ + D +F+E+
Sbjct: 170 NSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMR 229
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
S D F +I A +A +G G +H + +G +FVSNAL+ MY KC+ V
Sbjct: 230 SKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDV 289
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F M +R++VSW SII G +++G + E+ L +M+ G P+ +T V ++
Sbjct: 290 LAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRML--STGLKPNEVTFVGLI 346
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 1/189 (0%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
LQAC + IGK++H + T ++ LI MY CG D+ +F+ L R+
Sbjct: 10 LQACARHQSPPIGKKLHCHI-IKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRD 68
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
W ++++ + L LS+F + L+PD++ F C++KAC + + G VH
Sbjct: 69 PISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVH 128
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ D V ++L+ MY KC + +F+ + +N +SW ++I G++++G
Sbjct: 129 ATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKL 188
Query: 284 ESFDLLIKM 292
++ L KM
Sbjct: 189 DAIQLFQKM 197
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 83/169 (49%), Gaps = 6/169 (3%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
+GK++H LV S+ F+ N L+ MY+ C L ++++F + R++ W +++ G
Sbjct: 256 LGKQIHCLVILLGYESSLFVSNA-LVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGT 314
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG-VHGMAAKMGLIG 233
++ L + LS++ + S T LKP+ TF +I AC + V G + M G+
Sbjct: 315 AQHGLAEEALSLYNRMLS-TGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINP 373
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII--CGFSEN 279
+ L+ + + +EE L + MP + + +W +++ C N
Sbjct: 374 SLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRN 422
>gi|147799187|emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera]
Length = 542
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 116/222 (52%), Gaps = 3/222 (1%)
Query: 86 LLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSL 145
L + ++ D T VL AC + + K +H LV + + + LIT Y
Sbjct: 32 LYESGIYQFDQATLTTVL-TACDKPEFCYVSKMIHSLVFLYG-YEREITVGNALITSYFR 89
Query: 146 CGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPC 205
CG RRVFD + +N+ W A++SG ++ + Y + L +F ++ D + P++ T+
Sbjct: 90 CGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKMR-DGPVDPNSLTYLS 148
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
+ AC G+ + G +HG+ K+G+ D+ + +AL+ MY KC +E+ K+FE E +
Sbjct: 149 SLMACSGLQAIREGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVD 208
Query: 266 LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
VS I+ G ++NGF ES + +KM+ P++I+ +
Sbjct: 209 EVSMTVILVGLAQNGFEEESIQVFVKMVKNGVVIDPNMISAI 250
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 6/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHELV-SASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L AC + I G+++H LV F D I + L+ MYS CG D+ ++F+S +
Sbjct: 150 LMACSGLQAIREGRQIHGLVWKLGVHF--DLCIESALMDMYSKCGSLEDAWKIFESAEEV 207
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ ++ G +N + + +FV++ + + N ++ G + G +
Sbjct: 208 DEVSMTVILVGLAQNGFEEESIQVFVKMVKNGVVIDPNM-ISAILGVFGIDTSLALGKQI 266
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + K + FV+N LI MY KC +++ +K+F MP+RN VSWNS+I F+ +G
Sbjct: 267 HSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNG 326
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L +M EG P +T +++L
Sbjct: 327 SRALQLYEEMR--LEGVWPTDVTFLSLL 352
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 4/182 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L G + + +GK++H L+ + F +++ +N LI MYS CG DS ++F + R
Sbjct: 250 ILGVFGIDTSLALGKQIHSLIIKKS-FGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQR 308
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG- 221
N WN++++ F ++ + L ++ E+ + + P + TF ++ AC + V G G
Sbjct: 309 NSVSWNSMIAAFARHGNGSRALQLYEEMRLEG-VWPTDVTFLSLLHACAHVGLVEKGMGF 367
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSENG 280
+ MA G+ + ++ M G+ + E K E +PE+ ++ W +++ S +G
Sbjct: 368 LESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQALLGACSIHG 427
Query: 281 FS 282
S
Sbjct: 428 NS 429
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 59/134 (44%)
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ ++ WN+ +SG N +F +L + D T V+ AC
Sbjct: 1 MPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTVLTACDKPEFCYV 60
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
+H + G ++ V NALI Y +C ++F+ M E+N+V+W ++I G S+
Sbjct: 61 SKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQ 120
Query: 279 NGFSCESFDLLIKM 292
F ES L KM
Sbjct: 121 GQFYEESLKLFGKM 134
>gi|302817788|ref|XP_002990569.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
gi|300141737|gb|EFJ08446.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
Length = 564
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 125/236 (52%), Gaps = 14/236 (5%)
Query: 79 SLNKALSLLQE--NLHNADLKEATGVLLQ-ACGHEKDIEIGKRVHELVSASTQFSNDFII 135
S ++AL L ++ ++H T V AC +E GK+ H S + I+
Sbjct: 38 SGDQALELFKQMVDVHGIRADRVTFVTAATACSLVGSLEEGKQFHSRFVESG-LESSLIL 96
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
++ L+ MY CG ++R++FD + +N+ WN +++ + +N +++ L EL D
Sbjct: 97 DSALMNMYGRCGSAEEARKIFDRIPVKNVVCWNVMIAAYAQNGHFSEAL----ELYYDMN 152
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
LKPD TF V+ AC + G +H GL D FV NAL+ M+GKC + +
Sbjct: 153 LKPDRVTFLNVLHAC----TLESGRLIHQDVVSAGLERDKFVGNALVNMFGKCGSLSDAK 208
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++F+ + R+++SWN+++ + + G E+F+L +M + G P+ +T +++LP
Sbjct: 209 RVFDRIAFRDVISWNALMSVYIQQGHRKEAFELFKRMD--KAGLQPNSVTYLSLLP 262
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 5/169 (2%)
Query: 142 MYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF 201
MY CG ++R VF+S+K + F WN ++ + N L +F ++ ++ D
Sbjct: 1 MYGKCGSVEEARAVFNSIKRSSCFSWNLMLGAYCNNGSGDQALELFKQMVDVHGIRADRV 60
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
TF AC + + G H + GL + + +AL+ MYG+C EE K+F+ +
Sbjct: 61 TFVTAATACSLVGSLEEGKQFHSRFVESGLESSLILDSALMNMYGRCGSAEEARKIFDRI 120
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
P +N+V WN +I +++NG E+ +L M PD +T + VL
Sbjct: 121 PVKNVVCWNVMIAAYAQNGHFSEALELYYDM-----NLKPDRVTFLNVL 164
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 10/209 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPL-DSRRVFDSLKT 161
LL AC +E + +H+ + A D + LIT Y+ F L DS VF+ +K
Sbjct: 260 LLPAC---SSLEQLREIHQEL-ADQGLEQDEQVGNTLITAYN--KFSLEDSVAVFERMKR 313
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ W ++ G ++ L ++ E+ + ++PD C + AC + ++ G
Sbjct: 314 RSVVSWTCMIMGMVEHGYGGRALDLYREMVVEG-VRPDAVALVCALDACTSVENLAEGRK 372
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H + ++ DVFV+ A++ MYGKC E +F+ M + +WNS+I ++++G
Sbjct: 373 IHRLVEGTTMVTDVFVATAVVNMYGKCGKFAEAEAVFQGMKTTTVATWNSLIGAYAQHGH 432
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ L +M G PD +T++ L
Sbjct: 433 ATDALKLYERME--LSGTRPDGVTLLCAL 459
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 9/222 (4%)
Query: 94 ADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSR 153
ADL+E T LLQ+C D+ GK HEL+ A+ + LI MY CG ++
Sbjct: 23 ADLQEYTA-LLQSCVDSNDLAKGKHAHELI-ANAGLEQHLFLGNCLINMYVRCGSLEEAH 80
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
+F ++ RN+ W AL+S + + ++F + ++ P+++T ++ AC
Sbjct: 81 AIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANS 140
Query: 214 ADVGFGSGVHGMAAKMGL----IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSW 269
D+ G +H M ++GL V NA+I MY KC +E+ + +F +PE+++VSW
Sbjct: 141 RDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSW 200
Query: 270 NSIICGFS-ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ ++ E F ++ + +M+ + P+VIT +T L
Sbjct: 201 TAMAGAYAQERRFYPDALRIFREML--LQPLAPNVITFITAL 240
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L C + +GK +H V+ D + L+ MYS CG ++ F+++K R+
Sbjct: 645 LDTCLASTTLGLGKVIHACVT-EIGLEADIAVENALLNMYSNCGDWREALSFFETMKARD 703
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L WN + + + + L + + +F ++ + +KPD TF + GG A V G H
Sbjct: 704 LVSWNIMSAAYAQAGLAKEAVLLFRQMQLEG-VKPDKLTFSTTLNVSGGSALVSDGKLFH 762
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+AA+ GL DV V+ L+ +Y KC ++E + LF + +V N+II +++GFS
Sbjct: 763 ALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSE 822
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + KM +EG PDV T+V+++
Sbjct: 823 EAVKMFWKMQ--QEGVRPDVATLVSII 847
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 19/219 (8%)
Query: 102 VLLQACGHEKDIEIGKRVHELV------SASTQFSNDFIINTRLITMYSLCGFPLDSRRV 155
+L AC + +D+ IG+ +H ++ AST + ++ +I MY+ CG D+ V
Sbjct: 132 AMLNACANSRDLAIGRSIHAMIWELGLERASTTAT---LVGNAMINMYAKCGSLEDAIAV 188
Query: 156 FDSLKTRNLFQWNALVSGFTK-NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
F ++ +++ W A+ + + Y D L IF E+ L P+ TF + AC +
Sbjct: 189 FLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQP-LAPNVITFITALGACTSLR 247
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER---NLVSWNS 271
D G+ +H + + L D SNALI MYGKC E +F+ M R +LVSWN+
Sbjct: 248 D---GTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNA 304
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+I E G ++ + ++ EG P+ +T++T+L
Sbjct: 305 MISASVEAGRHGDAMAIFRRLR--LEGMRPNSVTLITIL 341
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 89/176 (50%), Gaps = 3/176 (1%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ T LI+M+ C +R VF+ + ++ W A+VS +N + +V ++F + +
Sbjct: 574 LETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEG 633
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+ PD FT + C +G G +H ++GL D+ V NAL+ MY C E
Sbjct: 634 VI-PDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREA 692
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ FE M R+LVSWN + +++ G + E+ LL + M EG PD +T T L
Sbjct: 693 LSFFETMKARDLVSWNIMSAAYAQAGLAKEAV-LLFRQMQL-EGVKPDKLTFSTTL 746
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 17/215 (7%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS--L 159
+L AC + + ++ G+++H L+ + + + T L++MY CG ++ VF L
Sbjct: 442 AILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPL 501
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+R+L WN ++ + +N+ + +E+ L PD +F V+ +C
Sbjct: 502 PSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVL-PDALSFTSVLSSC--------Y 552
Query: 220 SGVHGMAAKMGLIGDVFVS----NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
+M ++ + S ALI+M+G+C +E+ +F M ++VSW +++
Sbjct: 553 CSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSA 612
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+EN E +L +M EG IPD T+ T L
Sbjct: 613 TAENRDFKEVHNLFRRMQ--LEGVIPDKFTLATTL 645
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 93/182 (51%), Gaps = 13/182 (7%)
Query: 104 LQACGHEKDIEIGKRVHELV-SASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L AC +D G +H L+ AS F D + + LI MY CG + VF ++ +R
Sbjct: 240 LGACTSLRD---GTWLHSLLHEASLGF--DPLASNALINMYGKCGDWEGAYSVFKAMASR 294
Query: 163 ---NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA-DVGF 218
+L WNA++S + + D ++IF L + ++P++ T ++ A D G
Sbjct: 295 QELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEG-MRPNSVTLITILNALAASGVDFGA 353
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFS 277
G HG + G + DV + NA+I+MY KC F +F + + +++SWN+++ G S
Sbjct: 354 ARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTML-GAS 412
Query: 278 EN 279
E+
Sbjct: 413 ED 414
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 115/220 (52%), Gaps = 14/220 (6%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
K A ++Q+C +E+GK VH + F+ ++T L+ MY+ G DS VF
Sbjct: 221 KFAYSAIIQSCIGLDSLELGKMVHAQI-VMRGFATHIFVSTSLLNMYAKLGSIEDSYWVF 279
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
+ + N WNA++SG T N L+ + +FV + + P+ +T V KA G + DV
Sbjct: 280 NMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGA-CTPNMYTLVSVSKAVGKLVDV 338
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS------WN 270
G V A+++G+ G+V V ALI MY KC + + +F+ N ++ WN
Sbjct: 339 NMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDT----NFINCGVNTPWN 394
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++I G+S++G S E+ +L ++M C+ G D+ T +V
Sbjct: 395 AMISGYSQSGCSQEALELYVQM--CQNGITSDLYTYCSVF 432
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 106/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDF-IINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+ C + I K VH LV S D ++ +YS C + VFD +
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 183
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
RN+F W ++ G T++ L+ D F E+ ++ + PD F + +I++C G+ + G
Sbjct: 184 RNVFSWTVMIVGSTEHGLFFDGFKFFCEML-NSGILPDKFAYSAIIQSCIGLDSLELGKM 242
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH G +FVS +L+ MY K +E+ +F +M E N VSWN++I G + NG
Sbjct: 243 VHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGL 302
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTV 309
E+FDL ++M P++ T+V+V
Sbjct: 303 HLEAFDLFVRMK--NGACTPNMYTLVSV 328
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 109/208 (52%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ A K ++ G+ VH +V +N + YS CGF D R+VFD ++ R
Sbjct: 431 VFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEER 490
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W LV+ ++++ L + L+ F L + P+ FTF V+ +C + + +G V
Sbjct: 491 DIVSWTTLVTAYSQSSLGEEALATFC-LMREEGFAPNQFTFSSVLISCASLCFLEYGRQV 549
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ K GL + + +ALI MY KC + E K+F+ + ++VSW +II G++++G
Sbjct: 550 HGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLV 609
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M G + +T++ VL
Sbjct: 610 EDALQLFRRME--LSGIKANAVTLLCVL 635
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 112/209 (53%), Gaps = 7/209 (3%)
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS--LKTR 162
+A G D+ +GK V S + ++ T LI MYS CG D+R VFD+ +
Sbjct: 330 KAVGKLVDVNMGKEVQNCAS-ELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCG 388
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
WNA++SG++++ + L ++V++ + + D +T+ V A + FG V
Sbjct: 389 VNTPWNAMISGYSQSGCSQEALELYVQMCQNG-ITSDLYTYCSVFNAIAASKSLQFGRVV 447
Query: 223 HGMAAKMGL-IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
HGM K GL + V V+NA+ Y KC F+E++ K+F+ M ER++VSW +++ +S++
Sbjct: 448 HGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSL 507
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ M EEGF P+ T +VL
Sbjct: 508 GEEALATFCLMR--EEGFAPNQFTFSSVL 534
>gi|115473985|ref|NP_001060591.1| Os07g0670000 [Oryza sativa Japonica Group]
gi|22831115|dbj|BAC15976.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
gi|50510078|dbj|BAD30730.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
gi|113612127|dbj|BAF22505.1| Os07g0670000 [Oryza sativa Japonica Group]
gi|125559550|gb|EAZ05086.1| hypothetical protein OsI_27276 [Oryza sativa Indica Group]
Length = 726
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 124/243 (51%), Gaps = 12/243 (4%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQF 129
++ + +++L+ A +L+ D T L A G + + +++H L S
Sbjct: 105 LSAFPDPAEALDFASWMLRSGAVRPDAVTCTVALSLAAGRGEGFLV-RQLHALAWRSGLA 163
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKN-ELYTDVLSIFV 188
++ F+ N L+T YS G ++R VFD + R+L WNAL+ G ++ + +V+ +F+
Sbjct: 164 ADVFVGNA-LVTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLAQDGDCPAEVIGVFL 222
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
+ D +++PD + VI ACGG + G VHG A K+G+ G V + N L+AMY KC
Sbjct: 223 RMLRDGDVQPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGYVSIGNVLVAMYYKC 282
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC-EEGFIPDVITVV 307
+LF+ M ER++VSW + I S + D L G +G P+ +T V
Sbjct: 283 GAPGSARRLFDAMSERDVVSWTTAI--------SMDGEDALTLFNGMRRDGVPPNEVTFV 334
Query: 308 TVL 310
++
Sbjct: 335 ALM 337
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 10/208 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ ACG E +E+G++VH + I L+ MY CG P +RR+FD++ R
Sbjct: 240 VIPACGGEGKLELGRQVHGF-AVKLGVEGYVSIGNVLVAMYYKCGAPGSARRLFDAMSER 298
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +S E D L++F + D + P+ TF ++ A V
Sbjct: 299 DVVSWTTAIS--MDGE---DALTLFNGMRRDG-VPPNEVTFVALMSALPADCPARGAQMV 352
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K + G+ SN+LI MY K +++ +F++MP R +++WN++I G+++NG
Sbjct: 353 HAACLKAAVSGEAAASNSLITMYAKARRMDDARMVFDLMPRREIIAWNAVISGYAQNGRC 412
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L M C P+ T +VL
Sbjct: 413 NDALELFSSMARC---LTPNETTFASVL 437
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 10/185 (5%)
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE 189
S + + LITMY+ D+R VFD + R + WNA++SG+ +N D L +F
Sbjct: 362 SGEAAASNSLITMYAKARRMDDARMVFDLMPRREIIAWNAVISGYAQNGRCNDALELFSS 421
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADV--GFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
++ L P+ TF V+ A + V +G H A MG +V+ ALI MY K
Sbjct: 422 MAR--CLTPNETTFASVLSAVTAVETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAK 479
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG--CEEGFIPDVIT 305
+EE K F +R+L++W +II + +G S+ ++ + G G PD +
Sbjct: 480 RGNLEESRKAFHETEQRSLIAWTAIISANARHG----SYGAVMSLFGDMARSGVAPDGVV 535
Query: 306 VVTVL 310
++ VL
Sbjct: 536 LLAVL 540
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 10/148 (6%)
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
S F + + LI MY+ G +SR+ F + R+L W A++S ++ Y V+S
Sbjct: 460 SMGFGDSEYVAGALIDMYAKRGNLEESRKAFHETEQRSLIAWTAIISANARHGSYGAVMS 519
Query: 186 IFVELSSDTELKPDNFTFPCVIKAC--GGIADVG---FGSGVHGMAAKMGLIGDVFVSNA 240
+F +++ + + PD V+ AC GG+ D G F S MAA G+ +
Sbjct: 520 LFGDMAR-SGVAPDGVVLLAVLTACRYGGMVDAGRDIFDS----MAADRGVELWPEHYSC 574
Query: 241 LIAMYGKCAFVEEMVKLFEVMPERNLVS 268
++ M G+ + E +L MP VS
Sbjct: 575 VVDMLGRAGRLAEAEELMMRMPAGPSVS 602
>gi|115484703|ref|NP_001067495.1| Os11g0213500 [Oryza sativa Japonica Group]
gi|77549336|gb|ABA92133.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113644717|dbj|BAF27858.1| Os11g0213500 [Oryza sativa Japonica Group]
gi|125576589|gb|EAZ17811.1| hypothetical protein OsJ_33354 [Oryza sativa Japonica Group]
Length = 470
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 104/189 (55%), Gaps = 6/189 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C + G++ H D + T L+ MY CG +RRVFD ++
Sbjct: 12 LLRRCAAAGAVRPGEQAHARAVVGGWLP-DATLETDLVLMYCRCGERRRARRVFDGMRAP 70
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ +N L++ D + +F L + + L+PD ++ P V++AC + D G +
Sbjct: 71 SMHAYNVLLAASPPR----DAMEVFSRLLA-SGLRPDGYSVPAVVRACAELPDAVLGGVI 125
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A ++GL+G+V V+ AL+ MY K F+++ V++F+ M ER+ V WN ++ G++ G +
Sbjct: 126 HGFAVRLGLMGNVVVAAALLDMYAKAGFLDDAVRVFDEMTERDAVVWNCMVAGYARAGRA 185
Query: 283 CESFDLLIK 291
E+F++ +
Sbjct: 186 VETFEIFSR 194
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 13/214 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC D +G +H + + ++ L+ MY+ GF D+ RVFD + R
Sbjct: 109 VVRACAELPDAVLGGVIHGF-AVRLGLMGNVVVAAALLDMYAKAGFLDDAVRVFDEMTER 167
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF-----TFPCVIKACGGIADVG 217
+ WN +V+G+ + + IF S +++ N P V+ C ++
Sbjct: 168 DAVVWNCMVAGYARAGRAVETFEIF----SRAQVEAVNMVNGLQAVPSVLNICAKEGELM 223
Query: 218 FGSGVHG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G +HG M + D+ V NALI MY KC V +F M +R++VSW+++I +
Sbjct: 224 KGREIHGRMVRCLAFDSDIAVGNALINMYAKCGRVNVSQAVFSGMQQRDVVSWSTMIHSY 283
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S +G ++ + ++M+ EG P+ IT +VL
Sbjct: 284 SIHGKGEQALKVYMEML--SEGVKPNWITFTSVL 315
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 5/186 (2%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
+A +L C E ++ G+ +H + F +D + LI MY+ CG S+ VF
Sbjct: 207 QAVPSVLNICAKEGELMKGREIHGRMVRCLAFDSDIAVGNALINMYAKCGRVNVSQAVFS 266
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
++ R++ W+ ++ ++ + L +++E+ S+ +KP+ TF V+ +C V
Sbjct: 267 GMQQRDVVSWSTMIHSYSIHGKGEQALKVYMEMLSEG-VKPNWITFTSVLSSCSHSGLVT 325
Query: 218 FGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS-WNSII-- 273
G + M G+ ++ + G+ +EE V L MP S W +++
Sbjct: 326 EGRKIFESMTKVHGVHPAAEHYACMVDLLGRAGAIEEAVGLIRKMPMEPCASVWGALLSA 385
Query: 274 CGFSEN 279
C N
Sbjct: 386 CAMHNN 391
>gi|414865182|tpg|DAA43739.1| TPA: hypothetical protein ZEAMMB73_281838 [Zea mays]
Length = 1925
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 117/209 (55%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC + +G+ +H V T + + T L+ +Y+ G SRRVFD + R
Sbjct: 145 VIRACTAVSCLRLGREMHCRV-LRTGHGGNVGVQTALLDLYAKAGQIDVSRRVFDCMVLR 203
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WNA+VSG++ NE + + + + E+ ++P+ TF ++ CG + D G +
Sbjct: 204 DLISWNAMVSGYSLNECFREAVEMLQEMQQGG-MRPNASTFVGIVGMCGSVGDRDVGDSL 262
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K G+I D +++ALI MY + +F++ P ++LVS+NS+I + ++
Sbjct: 263 HAFALKGGVINDESLTSALITMYAAFDDLSSSRMVFDLHPVKDLVSFNSMISAYMQHHIW 322
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+F++ ++M C P+++TVV+VLP
Sbjct: 323 KEAFEIF-RLMHC-VAVRPNLVTVVSVLP 349
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 111/216 (51%), Gaps = 6/216 (2%)
Query: 98 EATGVL--LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV 155
+AT ++ + C + KD+ + K +H + +F + + L+ MY+ C S +
Sbjct: 406 DATTIMNVISGCRYTKDLHMAKSIHAY-AVRNKFESYHSVMNALLAMYADCRDISTSHTL 464
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
F ++ R L WN ++SGF + L +F ++ + E++ D T +I + D
Sbjct: 465 FQKMEVRMLISWNTMISGFAEIGDSDTCLILFCQMFHE-EVQFDLVTLIGLISSFSVPGD 523
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
G VH +A K G DV ++NALI MY C VE +LF+ RN +++N+++ G
Sbjct: 524 AIVGESVHSLAIKSGCNSDVSLTNALITMYANCGIVEAGQQLFDSCCSRNTITYNALMSG 583
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ +N S + L +M+ +E P+++T++ +LP
Sbjct: 584 YRKNNISAKILPLFYQMVENDEK--PNLVTLLNLLP 617
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 112/217 (51%), Gaps = 12/217 (5%)
Query: 96 LKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV 155
LK TG+L A ++ + +H ++ + + F++ T L+ Y G + +
Sbjct: 41 LKVLTGLLRDAYS----LKCLRELHAHLAVAGAIQDTFVV-TGLVERYVYFGKAASAALL 95
Query: 156 F-DSLKTR-NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
F ++ ++R ++ N V F+ + + ++L ++ EL DNFTFP VI+AC +
Sbjct: 96 FAETYRSRPAVYSLNLAVRCFSDHGFHRELLHLYRELCC---FGSDNFTFPPVIRACTAV 152
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
+ + G +H + G G+V V AL+ +Y K ++ ++F+ M R+L+SWN+++
Sbjct: 153 SCLRLGREMHCRVLRTGHGGNVGVQTALLDLYAKAGQIDVSRRVFDCMVLRDLISWNAMV 212
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G+S N E+ ++L +M + G P+ T V ++
Sbjct: 213 SGYSLNECFREAVEMLQEMQ--QGGMRPNASTFVGIV 247
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
D +G+ VH L S ++D + LITMY+ CG +++FDS +RN +NAL+
Sbjct: 523 DAIVGESVHSLAIKSG-CNSDVSLTNALITMYANCGIVEAGQQLFDSCCSRNTITYNALM 581
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
SG+ KN + +L +F ++ + E KP+ T ++ C G +H A +
Sbjct: 582 SGYRKNNISAKILPLFYQMVENDE-KPNLVTLLNLLPVCQSQLQ---GKCIHSYAVRNFT 637
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
+ + + + MY + +E K+F ++ RNL+ WN+ + + C+ D+++
Sbjct: 638 RLETPLFTSAMGMYSRFNNIEYCSKIFSLIGARNLIVWNAFLSACVQ----CKQADMVV- 692
Query: 292 MMGCEEGFI-----PDVITVVTVL 310
C + + PD +T++ ++
Sbjct: 693 --DCFKHMLFLNVRPDAVTMLALI 714
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 2/152 (1%)
Query: 107 CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQ 166
CG D ++G +H ND + + LITMY+ SR VFD ++L
Sbjct: 250 CGSVGDRDVGDSLHAFALKGGVI-NDESLTSALITMYAAFDDLSSSRMVFDLHPVKDLVS 308
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
+N+++S + ++ ++ + IF L ++P+ T V+ +C + G VHGM
Sbjct: 309 FNSMISAYMQHHIWKEAFEIF-RLMHCVAVRPNLVTVVSVLPSCSDFFGINHGESVHGMI 367
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
K+GL V V++AL++MY K ++ + LF
Sbjct: 368 IKLGLAEHVSVASALVSMYSKLGKLDSSLLLF 399
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
++F + RNL WNA +S + + V+ F + ++PD T +I AC +
Sbjct: 662 KIFSLIGARNLIVWNAFLSACVQCKQADMVVDCFKHMLF-LNVRPDAVTMLALISACSQL 720
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
+ F + + + + G ++ V NALI + +C + +LF+ E++ V+W ++I
Sbjct: 721 GNAYFAACIMAVILQKGFSTNILVLNALIDTHSRCGSISLARELFDSSVEKDSVTWGAMI 780
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+S +G + DL M+ + G PD IT V++L
Sbjct: 781 NAYSMHGNGEAALDLFSMMI--DSGVDPDDITFVSIL 815
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
+ PD T VI C D+ +H A + V NAL+AMY C +
Sbjct: 403 VAPDATTIMNVISGCRYTKDLHMAKSIHAYAVRNKFESYHSVMNALLAMYADCRDISTSH 462
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
LF+ M R L+SWN++I GF+E G S L +M E F D++T++ ++
Sbjct: 463 TLFQKMEVRMLISWNTMISGFAEIGDSDTCLILFCQMFHEEVQF--DLVTLIGLI 515
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 12/171 (7%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKN---ELYTDVLS 185
FS + ++ LI +S CG +R +FDS ++ W A+++ ++ + E D+ S
Sbjct: 738 FSTNILVLNALIDTHSRCGSISLARELFDSSVEKDSVTWGAMINAYSMHGNGEAALDLFS 797
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV-HGMAAKMGLIGDVFVSNALIAM 244
+ + D+ + PD+ TF ++ AC V G + + A G+ + ++ +
Sbjct: 798 MMI----DSGVDPDDITFVSILSACAHNGLVEQGRTLFKSLQADYGITPRMEHYACMVDL 853
Query: 245 YGKCAFVEEMVKLFEVMPER---NLVSWNSIICGFSENGFSCESF-DLLIK 291
G+ ++E + MP R NL+ C F N ES LLIK
Sbjct: 854 LGRTGHLDEAYDVVRSMPFRPSDNLLESLLGACRFHGNYKIGESIGKLLIK 904
>gi|357511423|ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501015|gb|AES82218.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 607
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 108/201 (53%), Gaps = 10/201 (4%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E+GK V + + I T L+ Y +R VFD + RN+ W A++S
Sbjct: 183 MELGKFVDAQTAFDQMPQRNIISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMIS 242
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G+ +N+ + D L +FV L TE +P++FTF V+ AC G + + G +H K G+
Sbjct: 243 GYVQNKRFVDALKLFV-LMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIA 301
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC---ESFDLL 289
DV +L+ MY KC ++ +FE + ++NLVSWN+II G++ +G + E FD +
Sbjct: 302 NDVIWLTSLVDMYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEFDRM 361
Query: 290 IKMMGCEEGFIPDVITVVTVL 310
K++G PD +T V VL
Sbjct: 362 -KVVGT-----PDEVTFVNVL 376
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
+FD + ++ WN ++SGF + + F+++ + P+++T +++A
Sbjct: 62 LFDKMPLKDAVSWNIMLSGFQRTRNSEGLYRCFLQMGR-AGVVPNDYTISTLLRAVISTE 120
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
VH +A +G +VFV ++LI Y E + + F + +++ SWN+++
Sbjct: 121 LDVLVRQVHALAFHLGHYLNVFVGSSLIRAYAGLKEEEALGRAFNDISMKDVTSWNALVS 180
Query: 275 GFSENG 280
+ E G
Sbjct: 181 SYMELG 186
>gi|302816115|ref|XP_002989737.1| hypothetical protein SELMODRAFT_41599 [Selaginella moellendorffii]
gi|300142514|gb|EFJ09214.1| hypothetical protein SELMODRAFT_41599 [Selaginella moellendorffii]
Length = 483
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 113/214 (52%), Gaps = 10/214 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-- 160
+L AC +D+E G VH+ ++++T + +I T ++ MY CG +++ FD +
Sbjct: 182 VLGACADMEDLEQGSLVHQEITSTTD--GNTLIATAVVNMYGKCGQVSEAKSAFDQISRK 239
Query: 161 -TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+R L WNA+++ + +N+ LS+ + S+ KPD T + AC + + G
Sbjct: 240 TSRTLVSWNAMLTAYAQNKHGRQALSLLAAMDSEGVTKPDRVTLITALNACADVGALAQG 299
Query: 220 SGVH-GMAAKMGL--IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
+H + +M DV V+ AL+ MYG+C VE+ +LFE MP ++VSW +I+ +
Sbjct: 300 KELHQAVDEEMSYKHRADVSVATALLNMYGRCGSVEQARRLFEAMPRHDIVSWTAIVSAY 359
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + S L M EG +P+ I+ V+++
Sbjct: 360 ARCRQAKVSLQLFRAME--LEGMLPNEISFVSIV 391
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 19/172 (11%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
T ++ YS G +++ ++ + + + WNA+++ + L +F D EL
Sbjct: 1 TGMVAAYSSDGRIVEAIQILEVMPQHGIVAWNAIITACARLGHCATALGMF----HDMEL 56
Query: 197 K---PDNFTFPCVIKACGGI-----ADVGFGSGVHGMAAKM-GLIGDVFVSNALIAMYGK 247
+ PD T V AC + + V +AA+M G + D V+ AL+ MYG+
Sbjct: 57 QGVEPDRVTMLAVSDACASSLEKESHEETMSASVDQVAARMKGFLPDTVVATALVRMYGR 116
Query: 248 CAFVEEMVKLFE------VMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
C V E +F +MP+R+ VSWNSI+ G S+NG E+ + M+
Sbjct: 117 CHRVAEAESVFRDIANKSIMPQRSRVSWNSIVSGLSQNGRGREALQVFRVMV 168
>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
Length = 771
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 117/214 (54%), Gaps = 14/214 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN--TRLITMYSLCGFPLDSRRVFDSLK 160
++ ACG E+D G VH LV S D ++N L+ MY G S RVF+ ++
Sbjct: 219 VVPACGTERDEGFGLSVHGLVLKSGL---DSVVNLGNALVDMYGKFGDLESSMRVFNGMQ 275
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF-- 218
+N WN+ + F + DVL +F + S+ E+ P + T ++ A + D+G+
Sbjct: 276 EKNEVSWNSALGCFAHAGFHEDVLEMF-RVMSEHEVTPGSVTLSSLLPA---LVDLGYFH 331
Query: 219 -GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G VHG + + + D+F++N+L+ MY K +E+ +FE + RN+VSWN++I +
Sbjct: 332 LGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLA 391
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+NG E+F L+I+M + G P+ T+V +LP
Sbjct: 392 QNGAETEAFSLVIEMQ--KNGECPNSFTLVNLLP 423
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 99/179 (55%), Gaps = 3/179 (1%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
+GK VH S+ FI N+ L+ MY+ G + +F++++ RN+ WNA+++
Sbjct: 331 HLGKEVHGYSIRRAMESDIFIANS-LMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIAN 389
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
+N T+ S+ +E+ + E P++FT ++ AC +A V G +H + L+
Sbjct: 390 LAQNGAETEAFSLVIEMQKNGEC-PNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMS 448
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
D+FVSNALI +Y KC + +F+ E++ VS+N++I G+S++ ES L +M
Sbjct: 449 DLFVSNALIDVYAKCGQLSVAQDIFD-RSEKDDVSYNTLIVGYSQSQCCFESLHLFQQM 506
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 92/180 (51%), Gaps = 3/180 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D L+T Y+ G D+RRVFD + R++ WN+LVS N + D V +
Sbjct: 146 DVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVGMM 205
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ + + + V+ ACG D GFG VHG+ K GL V + NAL+ MYGK +
Sbjct: 206 R-SGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDL 264
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E +++F M E+N VSWNS + F+ GF + ++ M E P +T+ ++LP
Sbjct: 265 ESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVM--SEHEVTPGSVTLSSLLP 322
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 107/208 (51%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC +++GK++H S +D ++ LI +Y+ CG ++ +FD +
Sbjct: 421 LLPACSRVASVKMGKQIHAW-SIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDR-SEK 478
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ +N L+ G+++++ + L +F ++ S ++ D +F + AC ++ G +
Sbjct: 479 DDVSYNTLIVGYSQSQCCFESLHLFQQMRS-AGIEYDAVSFMGCLSACANLSAFKQGKEI 537
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ + L F++N+L+ +Y K + K+F + +++ SWN++I G+ +G
Sbjct: 538 HGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQI 597
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+L M ++G D ++ + VL
Sbjct: 598 DVAFELFDLMK--DDGVDYDHVSYIAVL 623
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
L+ R+ F WN+L L ++ L ++ + ++PD+ TFP + A
Sbjct: 66 LRLRSAFLWNSLSRALASAGLPSEALRVY-NCMVRSGVRPDDRTFPFALHAAAAAVVAEA 124
Query: 219 -----GSGVHGMAAKMGLI-GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
G+ +H A + GL+ DVF N L+ Y + ++F+ MP R++VSWNS+
Sbjct: 125 EHPAKGAELHAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSL 184
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ NG ++ ++ MM G +V ++V+V+P
Sbjct: 185 VSALLTNGMLEDAKRAVVGMM--RSGIPVNVASLVSVVP 221
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 107/197 (54%), Gaps = 7/197 (3%)
Query: 118 RVHELVSASTQFSN----DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
R +L SA F N + + +I Y+ + +R++FD + ++L W++++SG
Sbjct: 700 RRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISG 759
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
+++ ++D L IF ++ ++KPD V+ +C + + G VH + +
Sbjct: 760 YSQANHFSDALEIFRQMQR-AKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKA 818
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
D + N+LI MY KC +E +++F+ M E++ +SWNSII G + NGF ES +L M+
Sbjct: 819 DTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAML 878
Query: 294 GCEEGFIPDVITVVTVL 310
EGF P+ +T + VL
Sbjct: 879 --TEGFRPNGVTFLGVL 893
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 9/201 (4%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E KR+H S ++ + ++ L + L + + +VFD ++ F WN L+
Sbjct: 466 MEAIKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIR 525
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G +++ D ++ F + + + PDN TFP ++KAC I + G +H K+GL+
Sbjct: 526 GLAQSDAPADAIA-FYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLL 584
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFD---LL 289
D+FVSN+LI +Y C + +F+ M +++VSWNS+ICG+S+ C F L
Sbjct: 585 SDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQ----CNRFKDILAL 640
Query: 290 IKMMGCEEGFIPDVITVVTVL 310
K+M EG D +T++ V+
Sbjct: 641 FKLMQ-NEGVKADKVTMIKVV 660
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 37/261 (14%)
Query: 83 ALSLLQE-NLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLIT 141
AL L + H AD A L+AC ++H LV F ++T L+
Sbjct: 74 ALQLFRHARWHAADDTYAFTFALKACAGLGWPRCCMQLHGLV-VRKGFEFQTYVHTALVN 132
Query: 142 MYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT-----------------KNEL----- 179
+Y LCG DSR F+ + +N WN +++GF +N +
Sbjct: 133 VYILCGCLADSRMAFEEMPVKNAVSWNVVITGFAGWGEVEYARLLFERMPCRNVVSWSGM 192
Query: 180 ---YT------DVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
YT + +++F + ++ + P T V+ A + + G +HG K G
Sbjct: 193 IDGYTRACRPVEAVALFRRMMAEG-ISPSEITVLAVVPALSNVGKILIGEALHGYCEKEG 251
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLF-EVMPERNLVSWNSIICGFSENGFSCESFDLL 289
L+ DV V N+LI +Y K ++ +++F E++ RNLVSW SII GF+ +G S ++ +L
Sbjct: 252 LVWDVRVGNSLIDLYAKIGSIQNSLRVFDEMLDRRNLVSWTSIISGFAMHGLSVKAVELF 311
Query: 290 IKMMGCEEGFIPDVITVVTVL 310
M G P+ IT ++VL
Sbjct: 312 ADMR--RAGIRPNRITFLSVL 330
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 94/176 (53%), Gaps = 2/176 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC + G+++H ++ S+ F+ N+ LI +Y+ CG +R VFD + +
Sbjct: 558 ILKACARINALNEGEQMHNHITKLGLLSDIFVSNS-LIHLYAACGNLCYARSVFDEMVVK 616
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+L+ G+++ + D+L++F +L + +K D T V+ AC + D +
Sbjct: 617 DVVSWNSLICGYSQCNRFKDILALF-KLMQNEGVKADKVTMIKVVSACTRLGDYSMADYM 675
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
+ DV++ N L+ +G+ ++ K+F M RN+V+ N++I +++
Sbjct: 676 VRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAK 731
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 7/147 (4%)
Query: 150 LDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKA 209
L + +VFD T W+AL+ ++ D L +F + D + F +KA
Sbjct: 45 LIAHQVFDRRPT----PWHALLKAYSHGPHPQDALQLFRH--ARWHAADDTYAFTFALKA 98
Query: 210 CGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSW 269
C G+ +HG+ + G +V AL+ +Y C + + FE MP +N VSW
Sbjct: 99 CAGLGWPRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSW 158
Query: 270 NSIICGFSENGFSCESFDLLIKMMGCE 296
N +I GF+ G E LL + M C
Sbjct: 159 NVVITGFAGWG-EVEYARLLFERMPCR 184
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ +C H +++GK VHE V D I+ LI MY CG ++ +VF +K +
Sbjct: 791 VVSSCAHLGALDLGKWVHEYVR-RNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEK 849
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+ WN+++ G N + L++F + ++ +P+ TF V+ AC
Sbjct: 850 DTLSWNSIIIGLANNGFEKESLNLFQAMLTEG-FRPNGVTFLGVLIACA 897
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 33/208 (15%)
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
F++NT L++ Y+ G D+RRVFD + RN F +NAL+S + D L++F +
Sbjct: 51 FLLNT-LLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPD 109
Query: 193 DTE-------------------------LKPDNF-----TFPCVIKACGGIADVGFGSGV 222
+ + D+F +F + AC G V
Sbjct: 110 PDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQV 169
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + K DV++ AL+ MY KC EE K+F+ MPERN+VSWNS+I + +NG
Sbjct: 170 HALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPV 229
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L ++MM ++GF+PD +T+ +V+
Sbjct: 230 DEALALFVRMM--KDGFVPDEVTLASVM 255
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 133/280 (47%), Gaps = 42/280 (15%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSAST 127
+ T E++ +++AL+L + + + + + ++ AC G++VH + S
Sbjct: 219 LITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSD 278
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR------------------------- 162
+F D ++N L+ MY+ CG +++ VFD + R
Sbjct: 279 RFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVF 338
Query: 163 ------NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
N+ WN L++ + N + L +FV L ++ + P ++T+ V+ AC +A++
Sbjct: 339 LQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRES-VWPTHYTYGNVLNACANLANL 397
Query: 217 GFGSGVHGMAAKMGLI------GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
G H K G DVFV N+L+ MY K + + K+FE M R+ VSWN
Sbjct: 398 QLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWN 457
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++I G+++NG + ++ L +M+ E PD +T++ VL
Sbjct: 458 AMIVGYAQNGRAKDALLLFERMLCSNER--PDSVTMIGVL 495
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 106/191 (55%), Gaps = 3/191 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC EK G++VH LV+ S+ S D I T L+ MY+ C P ++++VFD++ RN
Sbjct: 154 LSACASEKASRTGEQVHALVTKSSHGS-DVYIGTALVDMYAKCERPEEAQKVFDAMPERN 212
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN+L++ + +N + L++FV + D PD T V+ AC G+A G VH
Sbjct: 213 IVSWNSLITCYEQNGPVDEALALFVRMMKDG-FVPDEVTLASVMSACAGLAAGREGRQVH 271
Query: 224 GMAAKMGLIG-DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
K D+ ++NAL+ MY KC E +F+ M R++VS S+I G++++
Sbjct: 272 TRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANV 331
Query: 283 CESFDLLIKMM 293
++ + ++M+
Sbjct: 332 GDAQAVFLQMV 342
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 120/271 (44%), Gaps = 34/271 (12%)
Query: 36 NKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNAD 95
++ ++RS+ E S ++ AK+ N FLQ + K++ L+ HN++
Sbjct: 308 DRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMV------EKNVVAWNVLIATYAHNSE 361
Query: 96 LKEA------------------TGVLLQACGHEKDIEIGKRVH-ELVSASTQFSN----D 132
+EA G +L AC + ++++G++ H ++ +F + D
Sbjct: 362 EEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESD 421
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
+ L+ MY G D +VF+ + R+ WNA++ G+ +N D L +F +
Sbjct: 422 VFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLC 481
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
E +PD+ T V+ ACG V G M G+I +I + G+ +
Sbjct: 482 SNE-RPDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHL 540
Query: 252 EEMVKLFEVMP-ERNLVSWNSII--CGFSEN 279
+E+ +L E MP E + V W S++ C +N
Sbjct: 541 KEVEELIENMPMEPDAVLWASLLGACRLHKN 571
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
G+ F+ N L++ Y + + + ++F+ MP RN S+N+++ + G + ++ L
Sbjct: 48 GETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALF--- 104
Query: 293 MGCEEGFIPD 302
G IPD
Sbjct: 105 -----GAIPD 109
>gi|255559140|ref|XP_002520592.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540252|gb|EEF41825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 525
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 102/193 (52%), Gaps = 4/193 (2%)
Query: 118 RVHELVSASTQF-SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
RV E + Q D + ++ Y+ G + +VF + RNL WN+L+SGF
Sbjct: 334 RVDEAIHLFEQMVKKDIVSWNTMVAAYAQVGQMERALKVFKEMGERNLVSWNSLISGFML 393
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF 236
+ +Y D L FV + + + KPD TF C + +C +A + G +H + K G I D+F
Sbjct: 394 HGMYLDALWCFVLMQHEGK-KPDQSTFACALSSCAIVAALQVGRQLHHLVIKSGYINDLF 452
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCE 296
V NALI MY KC + E +F+ + ++VSWNS+I G++ NG E+ L +M
Sbjct: 453 VCNALITMYAKCGKILEAKLVFKGICNADVVSWNSLIGGYALNGCGEEALTLFEEMKLA- 511
Query: 297 EGFIPDVITVVTV 309
G +PD +T + V
Sbjct: 512 -GVVPDQVTFIGV 523
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 24/164 (14%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+I+ Y+ G +D+R +FD + RNL WN +++G+ N + +FV++ +
Sbjct: 12 MISAYAKNGRVIDARVLFDKMPCRNLVSWNTMIAGYLHNNKVDEAYELFVKMP-----RR 66
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI---------GDVFVSNALIAMYGKCA 249
D F++ +I +GM K + D NA+I+ Y +
Sbjct: 67 DLFSWTLMITCYTQ----------NGMLEKAKQLLNSLPCNYKKDAACWNAMISGYSREG 116
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
++ +LF MP +N+VSWNS++ G+++NG + L +M+
Sbjct: 117 RYDDAKRLFNEMPVKNIVSWNSMLAGYTQNGQMSLALQLFHEML 160
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 88/181 (48%), Gaps = 32/181 (17%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+I+ YS G D++R+F+ + +N+ WN++++G+T+N + L +F E+ L+
Sbjct: 108 MISGYSREGRYDDAKRLFNEMPVKNIVSWNSMLAGYTQNGQMSLALQLFHEM-----LER 162
Query: 199 DNFTFPCVIKACGGIAD----------------VGFGSGVHGMAAKMGLI---------- 232
D ++ ++ + D V + + ++G A K L+
Sbjct: 163 DVVSWNLMVDGFVELGDLDSAWEFFKKVPEPNIVSWVTMLYGFARKGKLLEARRLFDQMP 222
Query: 233 -GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
+V NA+I+ Y + ++E KLFE MP+R+ VSW ++I G+ G E+ L K
Sbjct: 223 SKNVVSWNAMISAYVQSRQIDEAEKLFEEMPKRDSVSWTTMINGYVRAGKLDEARKTLSK 282
Query: 292 M 292
+
Sbjct: 283 L 283
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L +C +++G+++H LV S + ND + LITMY+ CG L+++ VF + +
Sbjct: 423 LSSCAIVAALQVGRQLHHLVIKSG-YINDLFVCNALITMYAKCGKILEAKLVFKGICNAD 481
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTF 203
+ WN+L+ G+ N + L++F E+ + PD TF
Sbjct: 482 VVSWNSLIGGYALNGCGEEALTLFEEMKL-AGVVPDQVTF 520
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 76/161 (47%), Gaps = 32/161 (19%)
Query: 147 GFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCV 206
G L++RR+FD + ++N+ WNA++S + ++ + +F E+ K D+ ++ +
Sbjct: 209 GKLLEARRLFDQMPSKNVVSWNAMISAYVQSRQIDEAEKLFEEMP-----KRDSVSWTTM 263
Query: 207 IKAC--GGIADVGFGS----GVHGMAAKMGLIG---------------------DVFVSN 239
I G D + +AA+ +I D+ N
Sbjct: 264 INGYVRAGKLDEARKTLSKLPYKNIAAQTAMISGYIKYNKIDEARQIFNEIGTPDMVCFN 323
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
++A Y +C V+E + LFE M ++++VSWN+++ +++ G
Sbjct: 324 TMLAGYTQCGRVDEAIHLFEQMVKKDIVSWNTMVAAYAQVG 364
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 239 NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
N++I+ Y K V + LF+ MP RNLVSWN++I G+ N E+++L +KM
Sbjct: 10 NSMISAYAKNGRVIDARVLFDKMPCRNLVSWNTMIAGYLHNNKVDEAYELFVKM 63
>gi|297818116|ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322779|gb|EFH53200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 652
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 129/243 (53%), Gaps = 16/243 (6%)
Query: 75 EESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELV--SASTQFSND 132
E+ +S + + + N D+ TG++ AC E+ GK +H LV Q ++
Sbjct: 230 EQKESAFELFTEMHRNWIETDIYTYTGIV-SACSGEEHQSFGKSLHGLVIKKGLEQVTS- 287
Query: 133 FIINTRLITMYSLCGFPL----DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
++ LI+MY FP D+ +F+SLK ++L WN++++GF++N L D + F
Sbjct: 288 --VSNALISMY--IQFPTGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFR 343
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
L S + ++ D++ F V+++C +A + G H +A K + FV+++LI MY KC
Sbjct: 344 YLRS-SNIEVDDYAFSAVLRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKC 402
Query: 249 AFVEEMVKLFE-VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
+E K FE + + N ++WN++I G++++G S DL +M C + D +T
Sbjct: 403 GVIENARKCFEQISSKHNTIAWNAMILGYAQHGSGQVSLDLFSQM--CNQNVKLDHVTFT 460
Query: 308 TVL 310
+L
Sbjct: 461 AIL 463
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
R+FD + R+ WN ++SG+T + +F ++ D ++F ++K
Sbjct: 2 RLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKR-CGCYVDGYSFSRLLKGIASA 60
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
G VHG+ K G +V+V ++L+ MY KC VE+ F + E N VSWN++I
Sbjct: 61 KRFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALI 120
Query: 274 CGF 276
GF
Sbjct: 121 AGF 123
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 89/191 (46%), Gaps = 2/191 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ K ++G++VH LV + + + + L+ MY+ C D+ F +
Sbjct: 53 LLKGIASAKRFDLGEQVHGLV-VKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEP 111
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WNAL++GF + + + + D+ TF ++ V
Sbjct: 112 NSVSWNALIAGFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQV 171
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM-PERNLVSWNSIICGFSENGF 281
H K+GL ++ + NA+I+ Y C V + ++F+ + ++L+SWNS+I G S++
Sbjct: 172 HAKVLKLGLEHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQ 231
Query: 282 SCESFDLLIKM 292
+F+L +M
Sbjct: 232 KESAFELFTEM 242
>gi|225463207|ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Vitis vinifera]
Length = 868
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 106/196 (54%), Gaps = 3/196 (1%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK VH V + D + L++ Y G + +F ++K+R+L WNA+++G+
Sbjct: 265 GKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYA 324
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM-GLIGD 234
N + L +F E S +KPD+ T V+ AC + ++ G+HG + GL D
Sbjct: 325 SNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLRED 384
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
V NAL++ Y KC + + ++ F ++ ++L+SWN+I+ F+E+G +LL M+
Sbjct: 385 TSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWML- 443
Query: 295 CEEGFIPDVITVVTVL 310
EG PD IT++T++
Sbjct: 444 -REGIRPDSITILTII 458
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 7/176 (3%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELY-TDVLSIFVELSSDTELK 197
L+ +Y+ G ++F + R+ WN ++SG + + +V+ +F + E K
Sbjct: 80 LLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAK 139
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV-EEMVK 256
P++ T V+ C + + G VH K GL NALI+MY KC V +
Sbjct: 140 PNSVTIAIVLPVCARLREDA-GKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYA 198
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI-PDVITVVTVLP 311
F + +++VSWN++I GFSEN F+ E+F L M+ +G I P+ T+ ++LP
Sbjct: 199 AFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAML---KGPIQPNYATIASILP 251
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 119/268 (44%), Gaps = 41/268 (15%)
Query: 82 KALSLLQENLHNADLKEATGVL---LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
KAL L E + +K + L L AC H ++++ K +H + D +
Sbjct: 331 KALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNA 390
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L++ Y+ C + + + F + ++L WNA++ FT++ T ++++ + + ++P
Sbjct: 391 LLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREG-IRP 449
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI-GDV--FVSNALIAMYGKCAFVEEMV 255
D+ T +I+ ++ V H + + GL+ GD + N ++ Y KC ++ V
Sbjct: 450 DSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAV 509
Query: 256 KLF--------------------------------EVMPERNLVSWNSIICGFSENGFSC 283
+F M E +L +WN ++ ++EN F
Sbjct: 510 NIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPD 569
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ L ++ G +G PD++T++++LP
Sbjct: 570 QALSLFHELQG--QGMKPDIVTIMSILP 595
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 4/160 (2%)
Query: 151 DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
D+ +F+++ +L WN +V + +N+ LS+F EL +KPD T ++ AC
Sbjct: 539 DAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQG-MKPDIVTIMSILPAC 597
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
+A V HG + DV ++ A I MY KC V KLF P+++LV +
Sbjct: 598 AHMASVHMLRQCHGYVIR-ACFNDVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFT 656
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+++ GF+ +G E+ + M+ E G PD + + VL
Sbjct: 657 AMVGGFAMHGMGEEALRIFSYML--ELGVKPDHVIITAVL 694
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Query: 180 YTDVLSIFVE-LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVS 238
+ + LS+F+E + KP+ ++K+C I+ + FGS +HG A K+G + +
Sbjct: 18 HDEALSLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLC 77
Query: 239 NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL--LIKMMGCE 296
L+ +Y K ++ KLF M +R+ V WN ++ G + GF ++ L + M
Sbjct: 78 KGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLA--GFQSHEAEVMRLFRAMHMV 135
Query: 297 EGFIPDVITVVTVLP 311
P+ +T+ VLP
Sbjct: 136 NEAKPNSVTIAIVLP 150
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 14/159 (8%)
Query: 81 NKALSLLQENLHNADLKEATGVL---LQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
++ALSL E L +K + L AC H + + ++ H V + ND +N
Sbjct: 569 DQALSLFHE-LQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRAC--FNDVRLNG 625
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
I MYS CG + ++F S ++L + A+V GF + + + L IF + + +K
Sbjct: 626 AFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYM-LELGVK 684
Query: 198 PDNFTFPCVIKAC--GGIADVGFG-----SGVHGMAAKM 229
PD+ V+ AC G+ D G+ VHG M
Sbjct: 685 PDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTM 723
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 110/212 (51%), Gaps = 9/212 (4%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L AC G+++H LV + F+++ L+ MY+ C L + +VF+ +
Sbjct: 135 AVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSA-LVDMYAKCCDMLMAEKVFEEMPV 193
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
RNL WN ++ GF +N+LY + F L + D +F V AC ++ FG
Sbjct: 194 RNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQ 253
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VHG+A K+G+ V+++N+L MYGKC ++ KLF R++V+WN +I + N
Sbjct: 254 VHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHN 313
Query: 282 ---SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+C SF ++ + +G IPD + +VL
Sbjct: 314 YEDACNSFWMMRR-----KGSIPDEASYSSVL 340
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 114/226 (50%), Gaps = 5/226 (2%)
Query: 85 SLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYS 144
+LL ENL D + V AC + ++E GK+VH V+ N IN L MY
Sbjct: 221 TLLLENLTALDEVSFSSVF-SACANAGNLEFGKQVHG-VALKLGVWNLVYINNSLSDMYG 278
Query: 145 LCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFP 204
CG D ++F + R++ WN ++ + N Y D + F + + PD ++
Sbjct: 279 KCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSI-PDEASYS 337
Query: 205 CVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
V+ +C +A + G+ +H + G + ++ V+++LI MY KC + + ++FE +R
Sbjct: 338 SVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDR 397
Query: 265 NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
N+V W +II ++G + +L +M+ EG PD IT V+VL
Sbjct: 398 NVVCWTAIIAACQQHGHANWVVELFEQML--REGIKPDYITFVSVL 441
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 118 RVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL--KTRNLFQWNALVSGFT 175
++H + + S F+ N L+ +Y+ CG + +F S ++N+ W +L++ T
Sbjct: 48 QIHSQLITTALLSLPFLFNN-LLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLT 106
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+ + L+ F + + + P+++TF V+ AC G +H + K G + +V
Sbjct: 107 RFKRPFKALTFFNHMRR-SGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEV 165
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
FV +AL+ MY KC + K+FE MP RNLVSWN++I GF +N
Sbjct: 166 FVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQN 209
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +C + + G +H + S F + + + LITMY+ CG +D+ ++F+ + R
Sbjct: 339 VLHSCANLAALYQGTLIHNQIIRSG-FVKNLRVASSLITMYAKCGSLVDAFQIFEETEDR 397
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
N+ W A+++ ++ V+ +F ++ + +KPD TF V+ AC V G
Sbjct: 398 NVVCWTAIIAACQQHGHANWVVELFEQMLREG-IKPDYITFVSVLSACSHTGRVEEG 453
>gi|296084817|emb|CBI27699.3| unnamed protein product [Vitis vinifera]
Length = 807
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 106/196 (54%), Gaps = 3/196 (1%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK VH V + D + L++ Y G + +F ++K+R+L WNA+++G+
Sbjct: 204 GKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYA 263
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM-GLIGD 234
N + L +F E S +KPD+ T V+ AC + ++ G+HG + GL D
Sbjct: 264 SNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLRED 323
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
V NAL++ Y KC + + ++ F ++ ++L+SWN+I+ F+E+G +LL M+
Sbjct: 324 TSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWML- 382
Query: 295 CEEGFIPDVITVVTVL 310
EG PD IT++T++
Sbjct: 383 -REGIRPDSITILTII 397
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 7/176 (3%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELY-TDVLSIFVELSSDTELK 197
L+ +Y+ G ++F + R+ WN ++SG + + +V+ +F + E K
Sbjct: 19 LLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAK 78
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV-EEMVK 256
P++ T V+ C + + G VH K GL NALI+MY KC V +
Sbjct: 79 PNSVTIAIVLPVCARLREDA-GKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYA 137
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI-PDVITVVTVLP 311
F + +++VSWN++I GFSEN F+ E+F L M+ +G I P+ T+ ++LP
Sbjct: 138 AFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAML---KGPIQPNYATIASILP 190
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 119/268 (44%), Gaps = 41/268 (15%)
Query: 82 KALSLLQENLHNADLKEATGVL---LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
KAL L E + +K + L L AC H ++++ K +H + D +
Sbjct: 270 KALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNA 329
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L++ Y+ C + + + F + ++L WNA++ FT++ T ++++ + + ++P
Sbjct: 330 LLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREG-IRP 388
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI-GDV--FVSNALIAMYGKCAFVEEMV 255
D+ T +I+ ++ V H + + GL+ GD + N ++ Y KC ++ V
Sbjct: 389 DSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAV 448
Query: 256 KLF--------------------------------EVMPERNLVSWNSIICGFSENGFSC 283
+F M E +L +WN ++ ++EN F
Sbjct: 449 NIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPD 508
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ L ++ G +G PD++T++++LP
Sbjct: 509 QALSLFHELQG--QGMKPDIVTIMSILP 534
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 4/160 (2%)
Query: 151 DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
D+ +F+++ +L WN +V + +N+ LS+F EL +KPD T ++ AC
Sbjct: 478 DAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQG-MKPDIVTIMSILPAC 536
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
+A V HG + DV ++ A I MY KC V KLF P+++LV +
Sbjct: 537 AHMASVHMLRQCHGYVIR-ACFNDVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFT 595
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+++ GF+ +G E+ + M+ E G PD + + VL
Sbjct: 596 AMVGGFAMHGMGEEALRIFSYML--ELGVKPDHVIITAVL 633
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 14/159 (8%)
Query: 81 NKALSLLQENLHNADLKEATGVL---LQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
++ALSL E L +K + L AC H + + ++ H V + ND +N
Sbjct: 508 DQALSLFHE-LQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRAC--FNDVRLNG 564
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
I MYS CG + ++F S ++L + A+V GF + + + L IF + + +K
Sbjct: 565 AFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYM-LELGVK 623
Query: 198 PDNFTFPCVIKAC--GGIADVGFG-----SGVHGMAAKM 229
PD+ V+ AC G+ D G+ VHG M
Sbjct: 624 PDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTM 662
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 105/186 (56%), Gaps = 7/186 (3%)
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
T ++D I T +IT +S G +R F+ + RN+ WNA++ + +N + + L +
Sbjct: 286 TMAAHDVISWTTMITSFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKL 345
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
++ L E++PD TF +I AC +A G+ + A K+GL DV V N+ I +Y
Sbjct: 346 YI-LMLRQEVRPDWITFVTMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYS 404
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM--GCEEGFIPDVI 304
+C +EE LF+ + E+NL+SWNSI+ G+++NG + ++ M+ GC+ PD I
Sbjct: 405 RCGRIEEAQNLFDSIQEKNLISWNSIMGGYAQNGEGMKVIEIFQNMLMAGCK----PDHI 460
Query: 305 TVVTVL 310
T + +L
Sbjct: 461 TYIAIL 466
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 130/296 (43%), Gaps = 48/296 (16%)
Query: 46 EKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQ 105
E+ S+S + + S GLH +SL + + + + A+ +L
Sbjct: 87 ERDSVSWNTIISAFSHHGLHI-----------QSLGTFVEMWIQGCQPNSMTYAS--VLS 133
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC + D + GK +H + F D ++ L+ MY+ CG S+RVF++L+ N+
Sbjct: 134 ACANIYDFQWGKHLHARIVRVEPFL-DVLVGNGLVDMYAKCGLIDASKRVFNTLREHNVV 192
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
W +L+SG +V IF ++ D + DNF ++ C G ++ G +HG
Sbjct: 193 TWTSLISGIAHFGSQEEVYDIFYQMRKDCVIM-DNFILATILGVCEGETNISIGEQLHGF 251
Query: 226 AAKMGLIGDVFVSNALIAMYGKC--------AF-----------------------VEEM 254
K G+ V V NA ++MY KC AF VE
Sbjct: 252 TVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITSFSHSGNVERA 311
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F MPERN++SWN+++ + +N F E L I M+ + PD IT VT++
Sbjct: 312 RDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILML--RQEVRPDWITFVTMI 365
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 35/236 (14%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC I I ++H L S F N+ +I +I MY C + +VF ++ +LF
Sbjct: 2 ACSSVGYIRIAHQLHGL-SEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLF 60
Query: 166 QWNALVSGFTK-------------------------------NELYTDVLSIFVELSSDT 194
WN ++ G++K + L+ L FVE+
Sbjct: 61 SWNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQG 120
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+P++ T+ V+ AC I D +G +H ++ DV V N L+ MY KC ++
Sbjct: 121 -CQPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDAS 179
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F + E N+V+W S+I G + G E +D+ +M ++ I D + T+L
Sbjct: 180 KRVFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMR--KDCVIMDNFILATIL 233
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 108/208 (51%), Gaps = 2/208 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C + + G +VH + S N I + LI MY C PL + +VFDS+ R
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLN-LITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W+AL+SG N LS+F E+ + P+ FTF +KACG + + G +
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQG-IYPNEFTFSTNLKACGLLNALEKGLQI 129
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K+G V V N+L+ MY KC + E K+F + +R+L+SWN++I GF G+
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYG 189
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ D M PD T+ ++L
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLL 217
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL+AC I GK++H LV + + I L+ +Y CG+ +R+ FD +K
Sbjct: 216 LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE 275
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+ + W++L+ G+ + + + + +F L + + D+F +I A + G
Sbjct: 276 KTMISWSSLILGYAQEGEFVEAMGLFKRLQ-ELNSQIDSFALSSIIGVFADFALLRQGKQ 334
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+ +A K+ + V N+++ MY KC V+E K F M ++++SW +I G+ ++G
Sbjct: 335 MQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGL 394
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+S + +M+ PD + + VL
Sbjct: 395 GKKSVRIFYEML--RHNIEPDEVCYLAVL 421
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 6/213 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC H + +++GK +H V + + + + L+ MY C RRVFD + R
Sbjct: 220 VLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGR 279
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC-GGIADVGFGSG 221
+ WNA++SG+ +N L L +F+E+ L P+ T V+ AC +A + G
Sbjct: 280 RIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKE 339
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H A + L D+ V +AL+ MY KC + ++F MP +N+++WN +I +G
Sbjct: 340 IHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGK 399
Query: 282 SCESFDLLIKMMGCEEG----FIPDVITVVTVL 310
E+ +L K M E G P+ +T +TV
Sbjct: 400 GEEALELF-KNMVAEAGRGGEAKPNEVTFITVF 431
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 115/231 (49%), Gaps = 23/231 (9%)
Query: 102 VLLQACGHEKDIEIGKRVHELV------SASTQFSNDFI--------------INTRLIT 141
+L+A +D++ G+++H S+S +N + N L+
Sbjct: 97 AVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMA 156
Query: 142 MYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF 201
MY+ G DS+ +F+S R++ WN ++S F++++ +++ L+ F L ++ D
Sbjct: 157 MYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFF-RLMVLEGVELDGV 215
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMG-LIGDVFVSNALIAMYGKCAFVEEMVKLFEV 260
T V+ AC + + G +H + LI + FV +AL+ MY C VE ++F+
Sbjct: 216 TIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDH 275
Query: 261 MPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ R + WN++I G++ NG ++ L I+M+ G +P+ T+ +V+P
Sbjct: 276 ILGRRIELWNAMISGYARNGLDEKALILFIEMIKV-AGLLPNTTTMASVMP 325
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 24/172 (13%)
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+R+ W + T++ + + +S ++E++ + +PDNF FP V+KA G+ D+ G
Sbjct: 54 SRSTASWVDALRSRTRSNDFREAISTYIEMTV-SGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 221 GVHGMAAKMGL--------------------IGD-VFVSNALIAMYGKCAFVEEMVKLFE 259
+H A K G IGD F +NAL+AMY K V++ LFE
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172
Query: 260 VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+R++VSWN++I FS++ E+ M+ EG D +T+ +VLP
Sbjct: 173 SFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMV--LEGVELDGVTIASVLP 222
>gi|222628911|gb|EEE61043.1| hypothetical protein OsJ_14892 [Oryza sativa Japonica Group]
Length = 717
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 100/172 (58%), Gaps = 8/172 (4%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
I++ +R+ +L D +++T +++ + CG D++RVF+ ++ NL WNA+++
Sbjct: 305 IDLAQRLFDLAPV-----KDIVMSTSIVSGLASCGRITDAKRVFEGMEEHNLVSWNAMLT 359
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G+ ++ T L +F ++ +T+ + D T CV+ AC G+ D+G G VH A K G I
Sbjct: 360 GYVRSMDLTSALQLFQQMRQETK-ELDAVTLGCVLNACTGLLDLGKGEEVHTFAFKSGFI 418
Query: 233 GDVFVSNALIAMYGKCAFVE--EMVKLFEVMPERNLVSWNSIICGFSENGFS 282
G F+ NAL+ MY KC + E + LFE+ ER+ SWNS+I G+ + S
Sbjct: 419 GYPFLKNALLRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMS 470
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 112/239 (46%), Gaps = 9/239 (3%)
Query: 76 ESKSLNKALSLLQENLHNADLKEAT--GVLLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
S L AL L Q+ +A G +L AC D+ G+ VH S F
Sbjct: 363 RSMDLTSALQLFQQMRQETKELDAVTLGCVLNACTGLLDLGKGEEVHTFAFKSGFIGYPF 422
Query: 134 IINTRLITMYSLCGFPLDSRRV--FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ N L+ MYS CG + R+ F+ R+ + WN+L+SG+ ++ + L E+
Sbjct: 423 LKNA-LLRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALLALSEMH 481
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
E P+ TF + AC I + G +H + G + D + +ALI MY KC
Sbjct: 482 --YEATPNQSTFSSALAACANIFLLNHGKQIHAYMIRNGYVIDDILQSALIDMYSKCRLF 539
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +++FE P ++++ WNS+I G + NG +L +M ++G PD +T + L
Sbjct: 540 DYSMRIFEAGPSQDVILWNSMIFGCAYNGKGEYGLELFFEM--SKQGITPDSVTFLGAL 596
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 107/216 (49%), Gaps = 12/216 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSND--------FIINTRLITMYSLCGFPLDSRR 154
LL+ + + +R+ +++ST S F+ N R + + CG D+R+
Sbjct: 50 LLRLATSHRSLAAARRIATHLASSTAPSTSHSFTATSTFLFN-RAVESLAACGSLTDARK 108
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
+FD++ R+ WNA++S +++ E T+ +S+F ++S ++P + T V+ C
Sbjct: 109 LFDAMPRRDGGSWNAIISAYSRGEEPTEAISLFSAMNS-CGVRPKDVTLASVLGCCAECL 167
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
D+ +HG AK +V + AL+ +YGKC + E + F+ +P+ N +SWN II
Sbjct: 168 DLHGARQLHGHIAKRDFQSNVILGTALVDVYGKCFALSEARRAFDGIPKPNDISWNVIIR 227
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ G + D+ +M+ G P V TV L
Sbjct: 228 RYLLAGMGDLAIDMFFRMVWA--GVSPLVYTVSQAL 261
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C D+ +++H + A F ++ I+ T L+ +Y C ++RR FD +
Sbjct: 159 VLGCCAECLDLHGARQLHGHI-AKRDFQSNVILGTALVDVYGKCFALSEARRAFDGIPKP 217
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WN ++ + + + +F + + P +T + AC + G +
Sbjct: 218 NDISWNVIIRRYLLAGMGDLAIDMFFRMVW-AGVSPLVYTVSQALLACRDNGALEEGRRI 276
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H + G V V ++++ MY KC ++ +LF++ P +++V SI+ G + G
Sbjct: 277 HTFVLRHGYEQHVHVRSSVVDMYAKCGAIDLAQRLFDLAPVKDIVMSTSIVSGLASCG 334
>gi|413944102|gb|AFW76751.1| hypothetical protein ZEAMMB73_846363 [Zea mays]
Length = 248
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 4/199 (2%)
Query: 103 LLQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LLQ+ GK VH + S+ D +NT+L+ YS G +RRVFD +
Sbjct: 17 LLQSSMGANAFRQGKSVHHRAIITSSASPPDLHLNTKLVIFYSHFGDVAAARRVFDGMPH 76
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ W A+VSG+ KN + L +F + + +P+ FTF ++AC G G
Sbjct: 77 RSVVSWTAMVSGYAKNSRPQEALDLFAFMLR-SGARPNQFTFGSAVRACTGARCARSGEQ 135
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H AAK GD+FV +AL+ M+ +C V + +LF M ++LVSWNS++ GF E
Sbjct: 136 IHACAAKGRFAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNSLMRGFVEREH 195
Query: 282 SCESFDLLIKMMGCEEGFI 300
++ L M+ +G I
Sbjct: 196 CNDALGLFDSML--RDGMI 212
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G ++AC + G+++H +A +F+ D + + L+ M+ CG D+RR+F ++
Sbjct: 118 GSAVRACTGARCARSGEQIHA-CAAKGRFAGDMFVQSALMDMHLRCGSVGDARRLFAEME 176
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
++L WN+L+ GF + E D L +F + D
Sbjct: 177 RKDLVSWNSLMRGFVEREHCNDALGLFDSMLRD 209
>gi|115458508|ref|NP_001052854.1| Os04g0436800 [Oryza sativa Japonica Group]
gi|38344064|emb|CAD40816.2| OSJNBa0006B20.8 [Oryza sativa Japonica Group]
gi|113564425|dbj|BAF14768.1| Os04g0436800 [Oryza sativa Japonica Group]
gi|116310780|emb|CAH67572.1| H0315A08.2 [Oryza sativa Indica Group]
gi|215704891|dbj|BAG94919.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194892|gb|EEC77319.1| hypothetical protein OsI_15984 [Oryza sativa Indica Group]
Length = 717
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 100/172 (58%), Gaps = 8/172 (4%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
I++ +R+ +L D +++T +++ + CG D++RVF+ ++ NL WNA+++
Sbjct: 305 IDLAQRLFDLAPV-----KDIVMSTSIVSGLASCGRITDAKRVFEGMEEHNLVSWNAMLT 359
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G+ ++ T L +F ++ +T+ + D T CV+ AC G+ D+G G VH A K G I
Sbjct: 360 GYVRSMDLTSALQLFQQMRQETK-ELDAVTLGCVLNACTGLLDLGKGEEVHTFAFKSGFI 418
Query: 233 GDVFVSNALIAMYGKCAFVE--EMVKLFEVMPERNLVSWNSIICGFSENGFS 282
G F+ NAL+ MY KC + E + LFE+ ER+ SWNS+I G+ + S
Sbjct: 419 GYPFLKNALLRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMS 470
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 112/239 (46%), Gaps = 9/239 (3%)
Query: 76 ESKSLNKALSLLQENLHNADLKEAT--GVLLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
S L AL L Q+ +A G +L AC D+ G+ VH S F
Sbjct: 363 RSMDLTSALQLFQQMRQETKELDAVTLGCVLNACTGLLDLGKGEEVHTFAFKSGFIGYPF 422
Query: 134 IINTRLITMYSLCGFPLDSRRV--FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ N L+ MYS CG + R+ F+ R+ + WN+L+SG+ ++ + L E+
Sbjct: 423 LKNA-LLRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALLALSEMH 481
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
E P+ TF + AC I + G +H + G + D + +ALI MY KC
Sbjct: 482 --YEATPNQSTFSSALAACANIFLLNHGKQIHAYMIRNGYVIDDILQSALIDMYSKCRLF 539
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +++FE P ++++ WNS+I G + NG +L +M ++G PD +T + L
Sbjct: 540 DYSMRIFEAGPSQDVILWNSMIFGCAYNGKGEYGLELFFEM--SKQGITPDSVTFLGAL 596
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 107/216 (49%), Gaps = 12/216 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSND--------FIINTRLITMYSLCGFPLDSRR 154
LL+ + + +R+ +++ST S F+ N R + + CG D+R+
Sbjct: 50 LLRLATSHRSLAAARRIATHLASSTAPSTSHSFTATSTFLFN-RAVESLAACGSLTDARK 108
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
+FD++ R+ WNA++S +++ E T+ +S+F ++S ++P + T V+ C
Sbjct: 109 LFDAMPRRDGGSWNAIISAYSRGEEPTEAISLFSAMNS-CGVRPKDVTLASVLGCCAECL 167
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
D+ +HG AK +V + AL+ +YGKC + E + F+ +P+ N +SWN II
Sbjct: 168 DLHGARQLHGHIAKRDFQSNVILGTALVDVYGKCFALSEARRAFDGIPKPNDISWNVIIR 227
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ G + D+ +M+ G P V TV L
Sbjct: 228 RYLLAGMGDMAIDMFFRMVWA--GVSPLVYTVSQAL 261
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C D+ +++H + A F ++ I+ T L+ +Y C ++RR FD +
Sbjct: 159 VLGCCAECLDLHGARQLHGHI-AKRDFQSNVILGTALVDVYGKCFALSEARRAFDGIPKP 217
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WN ++ + + + +F + + P +T + AC + G +
Sbjct: 218 NDISWNVIIRRYLLAGMGDMAIDMFFRMVW-AGVSPLVYTVSQALLACRDNGALEEGRRI 276
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H + G V V ++++ MY KC ++ +LF++ P +++V SI+ G + G
Sbjct: 277 HTFVLRHGYEQHVHVRSSVVDMYAKCGAIDLAQRLFDLAPVKDIVMSTSIVSGLASCG 334
>gi|357484403|ref|XP_003612489.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513824|gb|AES95447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 955
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 129/244 (52%), Gaps = 13/244 (5%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVLL--QACGHEKDIEIGKRVHELVSASTQFSNDF 133
E+K A+ Q+ + + ++T +LL H K+ G+ +H VS + D
Sbjct: 175 ENKCYRTAVEFFQKMIKDQTRFDSTTLLLVVSTLSHLKNFGQGRVIH-CVSIKSGMLVDI 233
Query: 134 IINTRLITMYSLCG--FPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ LI MY+ CG DS +F+ ++ +++ WN+++ G N L F ++
Sbjct: 234 SLCNALINMYAKCGDVNSSDSECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMN 293
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVS--NALIAMYGKCA 249
E + D+ + C I AC + ++ FG +HG K+G + FVS N+LI++Y +C
Sbjct: 294 FSEE-RADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCE 352
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM--GCEEGFIPDVITVV 307
V+ +F M +++VSWN+++ G++ N E+FDL+++M GC F PD++T+
Sbjct: 353 AVDVAETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGC---FQPDIVTLT 409
Query: 308 TVLP 311
T+LP
Sbjct: 410 TMLP 413
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 11/190 (5%)
Query: 107 CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQ 166
C H + I++G + + VS + LI++YS C + VF + +++
Sbjct: 322 CIHGQGIKLGYKDNSFVSVANS----------LISLYSQCEAVDVAETVFREMAYKDIVS 371
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
WNA++ G+ NE + + VE+ + +PD T ++ C + G +HG A
Sbjct: 372 WNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYA 431
Query: 227 AKMGLIGDVF-VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
+ ++ D + N LI MY KC VE+ LF + +LVSWN++I G+S+N + ++
Sbjct: 432 IRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKA 491
Query: 286 FDLLIKMMGC 295
+L +++ C
Sbjct: 492 QNLFKELLCC 501
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 8/196 (4%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK +H L S F +D + LITMY C +R+VF NL WN ++S +
Sbjct: 629 GKSLHSLALKSP-FGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISALS 687
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
N+ + L +F L + KP+ FT V+ AC I + G VHG + G +
Sbjct: 688 HNKESREALELFRHL----QFKPNEFTIVSVLSACTRIGVLIHGKQVHGYTFRYGYQQNS 743
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
F+S AL+ +Y C ++ VK+F +++ +WNS+I + +G ++ +L +M C
Sbjct: 744 FISAALVDLYSTCGRLDNAVKVFR-HSQKSESAWNSMIAAYGNHGNGEKAIELFHEM--C 800
Query: 296 EEGFIPDVITVVTVLP 311
+ G T V++L
Sbjct: 801 DLGIKVTKSTFVSLLS 816
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 80/147 (54%), Gaps = 3/147 (2%)
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
+T L T+YS G SR +F+ + R++ WNA++S +N+ Y + F ++ D +
Sbjct: 135 STSLFTLYSKAGDFTSSRVLFEHIHNRDVIAWNAIISASLENKCYRTAVEFFQKMIKD-Q 193
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
+ D+ T V+ + + G G +H ++ K G++ D+ + NALI MY KC V
Sbjct: 194 TRFDSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISLCNALINMYAKCGDVNSSD 253
Query: 256 K--LFEVMPERNLVSWNSIICGFSENG 280
LFE M +++VSWNSI+ G NG
Sbjct: 254 SECLFEEMEYKDVVSWNSIMRGCLYNG 280
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 13/213 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +C + GK VH + + F N ++ L+ MY G D F L+
Sbjct: 513 ILSSCNSANSLNFGKSVH-IWQLKSGFLNHTLLVNSLMQMYINSG---DLTSGFSILQEN 568
Query: 163 ----NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
++ WN ++ G + + + + L F+ + D+ T V+ A I +
Sbjct: 569 SSIADIASWNTIIVGCVRGDQFQEALETFMLMRQGPSFNYDSITLVNVLSAVANIELLNQ 628
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G +H +A K D V N+LI MY +C + K+F+ NL +WN +I S
Sbjct: 629 GKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISALSH 688
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
N S E+ +L + F P+ T+V+VL
Sbjct: 689 NKESREALELFRHLQ-----FKPNEFTIVSVLS 716
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 9/200 (4%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+ +H + + LI MYS C + +F S +L WNA++SG++
Sbjct: 424 GRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYS 483
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+N+ Y ++F EL + + F ++ +C + FG VH K G +
Sbjct: 484 QNKYYEKAQNLFKELLCCGQNCSSSTVFA-ILSSCNSANSLNFGKSVHIWQLKSGFLNHT 542
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPER----NLVSWNSIICGFSENGFSCESFDLLIK 291
+ N+L+ MY ++ F ++ E ++ SWN+II G E+ + +
Sbjct: 543 LLVNSLMQMYINSG---DLTSGFSILQENSSIADIASWNTIIVGCVRGDQFQEALETFM- 598
Query: 292 MMGCEEGFIPDVITVVTVLP 311
+M F D IT+V VL
Sbjct: 599 LMRQGPSFNYDSITLVNVLS 618
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 100/172 (58%), Gaps = 3/172 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+ ++ G +R++FD++ R++ W ++++G+++ ++D + +F E+ + ++KP
Sbjct: 289 LVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMA-AKVKP 347
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D T V+ AC + + G VH + G+ D++V N+LI MY KC VE+ +++F
Sbjct: 348 DKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVF 407
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
M +++ VSW S+I G + NGF+ + DL +M+ EG P T V +L
Sbjct: 408 HRMKDKDSVSWTSVISGLAVNGFANSALDLFSQML--REGVQPTHGTFVGIL 457
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 98/178 (55%), Gaps = 2/178 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L +AC DI G+++H + + F + ++ LI MY++CG ++++FD + R
Sbjct: 122 LFKACARVSDIVSGRKIH-VHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDR 180
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN L+ G+++ Y +VL +F +++ +K D T +I AC + D F +
Sbjct: 181 DLVSWNTLICGYSQYNKYKEVLRLFDAMTA-ANIKADAVTMVKIILACSHLGDWEFADSM 239
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+ L DV++ N LI MYG+ + E +F+ M ERN+VSWN+++ G ++ G
Sbjct: 240 VKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWNALVMGHAKVG 297
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
Query: 127 TQFSNDFIINTRLITMYSLCGFPLD-SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
TQ D + + +I YSL L + VF+ ++ L WN ++ G ++++ + +
Sbjct: 43 TQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVVWNHMIRGLSQSDHPVEAIH 102
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
++ + + +N T + KAC ++D+ G +H A K+G +FVSNALI MY
Sbjct: 103 MYTRMHHQG-ITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLGFESYLFVSNALIHMY 161
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
C + K+F+ M +R+LVSWN++ICG+S+ E L M D +T
Sbjct: 162 AMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAAN--IKADAVT 219
Query: 306 VVTVL 310
+V ++
Sbjct: 220 MVKII 224
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 87/212 (41%), Gaps = 17/212 (8%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
K +L AC H +++G VH + D + LI MY CG + VF
Sbjct: 349 KVTVASVLSACAHLGKLDVGWAVHHYIRRHG-VQADIYVGNSLIDMYCKCGMVEKALEVF 407
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
+K ++ W +++SG N L +F ++ + ++P + TF ++ AC V
Sbjct: 408 HRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREG-VQPTHGTFVGILLACAHAGLV 466
Query: 217 GFG-------SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSW 269
G VHG+ M G V L++ G E +K ++P+ +V W
Sbjct: 467 NKGLEYFESMESVHGLVPAMKHYGCVV---DLLSRSGNIDKAYEFIKKMPIVPD--VVVW 521
Query: 270 NSII--CGFSENGFSCE-SFDLLIKMMGCEEG 298
++ C N E + L+++ C+ G
Sbjct: 522 RILLSACKLHGNVVLAEIATKRLLELDPCDSG 553
>gi|147834049|emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
Length = 751
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
T +I YS G +R +FD++ +NLF WNA++SG+ +N+ + L +F E+ S T L
Sbjct: 394 TIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYXQNKQPYEALKLFHEMQSTTSL 453
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
+PD T V+ A + + G VH + L V ALI MY KC + +
Sbjct: 454 EPDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRG 513
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ MPE+ SWN++I F+ NG + E+ L ++M +GF+P+ IT++ VL
Sbjct: 514 VFDNMPEKETASWNALINAFAINGRAKEALGLFMEM--NHKGFMPNEITMIGVL 565
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 11/210 (5%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
VL ++C I G+ +H V A F D T L+ MY+ G +R++FD +
Sbjct: 267 VLAKSCALNMAIWEGQEIHSHVVA-VGFCLDLYAATALVDMYAKFGKMDCARKLFDEMID 325
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R+ W AL+ G+ ++ + +F D ++ D+ F +I A + D+
Sbjct: 326 RSQVSWTALIGGYVRSGDMDNAGKLF-----DQMIEKDSAAFNTMIDAYVKLGDMCSARK 380
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+ + ++ +I Y ++ LF+ MPE+NL SWN++I G+ +N
Sbjct: 381 LFDEMPERSVVSWTI----MIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYXQNKQ 436
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ L +M PD +T+V+VLP
Sbjct: 437 PYEALKLFHEMQSTTS-LEPDEVTIVSVLP 465
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 74/143 (51%), Gaps = 1/143 (0%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRN-LFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L +Y + +RR+FD R+ F N+++ + Y++ +++ +L +T
Sbjct: 200 LAPLYDPLAGIVHARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSESFALYRDLRRNTSFT 259
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
PD+FTF + K+C + G +H +G D++ + AL+ MY K ++ KL
Sbjct: 260 PDSFTFSVLAKSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKL 319
Query: 258 FEVMPERNLVSWNSIICGFSENG 280
F+ M +R+ VSW ++I G+ +G
Sbjct: 320 FDEMIDRSQVSWTALIGGYVRSG 342
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 102/230 (44%), Gaps = 9/230 (3%)
Query: 76 ESKSLNKALSLLQENLHNADLK--EATGV-LLQACGHEKDIEIGKRVHELVSASTQFSND 132
++K +AL L E L+ E T V +L A +++G VH V +
Sbjct: 433 QNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGWVHRFVR-RKKLDRA 491
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
+ T LI MY+ CG + SR VFD++ + WNAL++ F N + L +F+E++
Sbjct: 492 TNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGRAKEALGLFMEMNH 551
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
P+ T V+ AC V G + GL + ++ + G+ ++
Sbjct: 552 KG-FMPNEITMIGVLSACNHSGLVEEGKRWFKAMEEFGLTPKIEHYGCMVDLLGRAGCLQ 610
Query: 253 EMVKLFEVMP-ERNLVSWNSII--CGFSENGFSCES-FDLLIKMMGCEEG 298
E KL E MP E N + +S + CG+S++ E IKM +G
Sbjct: 611 EAEKLMESMPYEANGIILSSFLFACGYSKDVARAERVLKEAIKMEAWNDG 660
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 99/194 (51%), Gaps = 2/194 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C E G+ VH V T F +D + L+ MY+ CG D+ VFD + R
Sbjct: 138 VLKVCASELGAVFGEVVHGQV-VRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIR 196
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W A+++ + + E L +F ++ + L D T V A G + D V
Sbjct: 197 DVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLG-DEITAISVASAVGQLGDGRMAISV 255
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A G IGDV V N+++ MY KC VE +F+ M ERN +SWNS++ G+++NG
Sbjct: 256 HGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRP 315
Query: 283 CESFDLLIKMMGCE 296
++ L +M E
Sbjct: 316 TDALSLFNQMQASE 329
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 123/245 (50%), Gaps = 8/245 (3%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADL-KEATGV-LLQACGHEKDIEIGKRVHELVSAST 127
+ TL E+++ KAL L ++ L E T + + A G D + VH +
Sbjct: 204 MITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGY-AVLN 262
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
F D + ++ MY+ CG +R VFD ++ RN WN+++SG+T+N TD LS+F
Sbjct: 263 GFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLF 322
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
++ + +E P+ T ++ AC + G +H + D + NA++ MY K
Sbjct: 323 NQMQA-SECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMK 381
Query: 248 CAFVEEMVKLFE--VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
C ++ V++F + ER++ SWN +I G+ +G E+ +L +M EG P+ IT
Sbjct: 382 CGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQ--VEGVEPNDIT 439
Query: 306 VVTVL 310
++L
Sbjct: 440 FTSIL 444
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 11/181 (6%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSL--------KTRNLFQWNALVSGFTKNELYTDVLSIFV 188
RLI +YS G +R +FD + N F N ++ + + + +++
Sbjct: 62 ARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYI 121
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
+ + +NFT+P V+K C FG VHG + G D+FV AL+ MY KC
Sbjct: 122 YMQR-MGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKC 180
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
+ + ++F+ M R++V W ++I + + ++ L KM EEGF+ D IT ++
Sbjct: 181 GEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQ--EEGFLGDEITAIS 238
Query: 309 V 309
V
Sbjct: 239 V 239
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS--L 159
+++ AC + +G+++H V S++ D + ++ MY CG + +F++ L
Sbjct: 339 IMVSACSYLGSKHLGRKLHNFV-ISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCEL 397
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
R++ WN L+SG+ + + L +F + + ++P++ TF ++ AC + G
Sbjct: 398 GERDVSSWNVLISGYGVHGHGKEALELFSRMQVEG-VEPNDITFTSILSACSHAGLIDEG 456
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
K+ + ++ ++ M G+ F+ E +L + +P R
Sbjct: 457 RKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSR 501
>gi|302782105|ref|XP_002972826.1| hypothetical protein SELMODRAFT_173139 [Selaginella moellendorffii]
gi|300159427|gb|EFJ26047.1| hypothetical protein SELMODRAFT_173139 [Selaginella moellendorffii]
Length = 624
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 134/286 (46%), Gaps = 38/286 (13%)
Query: 35 RNKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLH-- 92
+N + R++F S++ KTN + F++ + + + S +L SLL + L
Sbjct: 155 KNVSAARAVFS-----SMTDKTNVVTWNA--FIRALASSRDASGALQTFRSLLLQGLVPD 207
Query: 93 -----NADLKEAT---GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYS 144
NA T L+AC E +++ D + LI M+
Sbjct: 208 TVTFINASQGAKTPPEAKYLEACRQESGVQL----------------DVALGNTLINMFG 251
Query: 145 LCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFP 204
P ++RRVFD+ +N+ WNA++S +++N + + +++F +++S +KPD TF
Sbjct: 252 GSSQPCEARRVFDATHNKNIVSWNAMLSAYSQNGHFEETIALFKQMASTKTVKPDKLTFA 311
Query: 205 CVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
V+ +C + ++ G H A + GL V V+ LI MY KC +EE +F P
Sbjct: 312 SVLSSCANLENLREGKLAHAAAVEAGLEFAVPVAATLIQMYSKCHCLEEARDIFSRSPSS 371
Query: 265 NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++V+W +I +++NG E+ L +M PD + TVL
Sbjct: 372 DVVAWTVMISAYAQNGRPQEAIALFFRMT-----VPPDGVAFATVL 412
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 105/209 (50%), Gaps = 9/209 (4%)
Query: 103 LLQACGHEKDIEIGKRVHEL-VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L +C + +++ GK H V A +F+ + LI MYS C ++R +F +
Sbjct: 313 VLSSCANLENLREGKLAHAAAVEAGLEFA--VPVAATLIQMYSKCHCLEEARDIFSRSPS 370
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ W ++S + +N + +++F ++ + PD F V+ AC ++ G
Sbjct: 371 SDVVAWTVMISAYAQNGRPQEAIALFFRMT----VPPDGVAFATVLGACASSENLEAGRV 426
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
V ++GL + V+NA++ +YGKCA + E ++F M +R+ VSWN+++ ++ G
Sbjct: 427 VRAQIVELGLDAERAVANAVLDLYGKCAEIVETAEIFGRMRQRDRVSWNTMVAAYARAGH 486
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ S M EG P +++V+ L
Sbjct: 487 TAGSLWCFRAMQ--LEGVCPSEVSLVSAL 513
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 89/193 (46%), Gaps = 8/193 (4%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK H +S +T S D + I MY G ++ VFD + R++ W +VS +
Sbjct: 27 GKLAHACLSEATSGS-DRVAGNAAINMYGKFGCVESAKVVFDRVLERDIITWTLMVSAYA 85
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+N +F ++ + + P+ TF ++ AC ++ F VH + + G
Sbjct: 86 QNGHTRQAFQVFGKMLVEG-VVPNKVTFLAILNACSSSSEAAF---VHRLLFESGFQFTA 141
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSENGFSCESFDLLIKMMG 294
V ++L+ YGKC V +F M ++ N+V+WN+ I + + + + ++
Sbjct: 142 KVESSLVDAYGKCKNVSAARAVFSSMTDKTNVVTWNAFIRALASSRDASGALQTFRSLL- 200
Query: 295 CEEGFIPDVITVV 307
+G +PD +T +
Sbjct: 201 -LQGLVPDTVTFI 212
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
+ P+ F V+ + G + + G H ++ D NA I MYGK VE
Sbjct: 6 IAPNKFLLVRVLSS--GCSSLAQGKLAHACLSEATSGSDRVAGNAAINMYGKFGCVESAK 63
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ + ER++++W ++ +++NG + ++F + KM+ EG +P+ +T + +L
Sbjct: 64 VVFDRVLERDIITWTLMVSAYAQNGHTRQAFQVFGKML--VEGVVPNKVTFLAIL 116
>gi|357504423|ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497515|gb|AES78718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 655
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 110/210 (52%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ C DIE+G ++H + F D + L+ +Y+ CGF ++RRVF + R
Sbjct: 173 LICLCTQFNDIEMGVQLH-CFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCR 231
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGS 220
+L WN +VS + N L + +F + D + D FTF ++ + FG
Sbjct: 232 DLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDV-VNGDEFTFSSLLSVISDDALEYYDFGK 290
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH + + DV V++ALI MY K + + ++F+ M RN+V+WN++I GF +G
Sbjct: 291 QVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHG 350
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E L+ +M+ EGF+PD +T+ +++
Sbjct: 351 DGNEVMKLVKEML--REGFLPDELTISSII 378
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 106/197 (53%), Gaps = 4/197 (2%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
+ GK+VH LV + F +D ++ + LI MY+ +D+RRVFD + RN+ WN ++ G
Sbjct: 287 DFGKQVHSLVLRQS-FDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVG 345
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
F + +V+ + E+ + L PD T +I +CG + + VH A K+
Sbjct: 346 FGNHGDGNEVMKLVKEMLREGFL-PDELTISSIISSCGYASAITETLQVHAFAVKLSCQD 404
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
+ V+N+LI+ Y KC + K FE+ + +LV+W S+I ++ +G + +S ++ KM+
Sbjct: 405 FLSVANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKML 464
Query: 294 GCEEGFIPDVITVVTVL 310
G PD I + VL
Sbjct: 465 S--YGIKPDRIAFLGVL 479
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 15/168 (8%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT----KNE------LYTDVL 184
+ +++++Y C D++++F+ L RN+ WN ++ +NE ++
Sbjct: 97 LQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFR 156
Query: 185 SIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAM 244
+ +E+ + PD+ TF +I C D+ G +H K+G D FV AL+ +
Sbjct: 157 RMLLEM-----MVPDHITFNGLICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGL 211
Query: 245 YGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
Y KC FVE ++F + R+LV WN ++ + N E+F + M
Sbjct: 212 YAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSM 259
>gi|225452668|ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g28640-like [Vitis vinifera]
Length = 511
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 114/209 (54%), Gaps = 3/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC + + +GK++H V + S+D + T L+ Y+ C D+R++FD +
Sbjct: 111 IISACTNSLWMLLGKQIHNWVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNL 170
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ QWN L++G+ + L + L+ F + + ++PD F +K C + + G +
Sbjct: 171 DVVQWNVLLNGYVRRGLAPEALNAFRNMLV-SGVEPDEFCLTTALKGCAQLGALQQGKWI 229
Query: 223 HGMAAKMGLI-GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
H K + DVF+ AL+ MY KC ++ V++FE M +RN+ SW+++I GF+ +G
Sbjct: 230 HEYVTKRKWLEADVFIGTALVDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIGGFALHGH 289
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L +M E+G PD + ++ V+
Sbjct: 290 VRKAMQCLERMQ-VEDGLRPDGVVLLGVI 317
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 9/211 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC--GFPLDSRRVFDSLK 160
L Q+C + + K +H L + N++ I ++LI+ +L G + +F ++
Sbjct: 10 LAQSCSNMRQF---KAIHALFIVNGLHLNNYAI-SKLISFCALSNSGSLSYASLIFSQIQ 65
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
NLF +N L+ ++++ L F + D + PD TFP +I AC + G
Sbjct: 66 NPNLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFIISACTNSLWMLLGK 125
Query: 221 GVHGMAAKMGLI-GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H K G+ D V AL+ Y +C + + KLF+ +P ++V WN ++ G+
Sbjct: 126 QIHNWVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDVVQWNVLLNGYVRR 185
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + E+ + M+ G PD + T L
Sbjct: 186 GLAPEALNAFRNML--VSGVEPDEFCLTTAL 214
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 4/175 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+ C ++ GK +HE V+ D I T L+ MY+ CG S VF+ + RN
Sbjct: 214 LKGCAQLGALQQGKWIHEYVTKRKWLEADVFIGTALVDMYAKCGCIDRSVEVFEGMTKRN 273
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGSG 221
+F W+A++ GF + + + + L+PD VI AC G+ + G
Sbjct: 274 VFSWSAMIGGFALHGHVRKAMQCLERMQVEDGLRPDGVVLLGVIMACAHAGLQEEG-QFL 332
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS-WNSIICG 275
+ M A+ G++ + ++ + + ++E +KL MP + + W +++ G
Sbjct: 333 LENMEARYGILPKHEHYSCMVDLLCRAGQLDEALKLIRRMPMKPRAAVWGALLSG 387
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 100/180 (55%), Gaps = 3/180 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I + L+ Y G ++ F+ L R++ WNA+V+G+ + + VL F ++
Sbjct: 170 DVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMN 229
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
D + P FT V+ + D+ G +HG A KMG V VSN+LI MYGKC +
Sbjct: 230 -DESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCI 288
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ +++FE+M E+++ SWNSI+ + G + LL +M+G G PD++TV TVLP
Sbjct: 289 EDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGA--GIQPDLVTVTTVLP 346
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 111/210 (52%), Gaps = 12/210 (5%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF-DSLKTR 162
LQA H K++ GK +H + + F N + T LI MYS C + +F D
Sbjct: 44 LQASAHHKNLSKGKEIHSYMLING-FLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEI 102
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+F +NA++SGF N + + ++ ++ + PD FTFPC IKAC + ++ +
Sbjct: 103 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVI-PDKFTFPCAIKACLDVLEI---KKI 158
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ K GL DVF+ +AL+ Y K +E FE +P R++V WN+++ G+++ G
Sbjct: 159 HGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIG-- 216
Query: 283 CESFDLLIKMMG--CEEGFIPDVITVVTVL 310
F+++++ +E +P TV VL
Sbjct: 217 --QFEMVLETFRRMNDESVVPSRFTVTGVL 244
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 10/205 (4%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
D+ G+ +H + + + ++ LI MY C D+ +F+ ++ +++F WN++V
Sbjct: 252 DLNNGRIIHGF-AMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIV 310
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
S + + L + + ++PD T V+ AC +A + G +HG GL
Sbjct: 311 SVHEQCGDHDGTLRLLDRMLG-AGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGL 369
Query: 232 ------IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
I DV + NA+I MY KC + + +FE M +++ SWN +I G+ +G+ E+
Sbjct: 370 GKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEA 429
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
++ +M CE PD +T V VL
Sbjct: 430 LEMFSRM--CEVQLKPDEVTFVGVL 452
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 12/216 (5%)
Query: 70 ITTLCEESKSLNKALSLLQENLH---NADLKEATGVLLQACGHEKDIEIGKRVHELVSAS 126
I ++ E+ + L LL L DL T VL AC H + G+ +H + S
Sbjct: 309 IVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVL-PACSHLAALMHGREIHGYMIVS 367
Query: 127 T-----QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYT 181
+ +D ++ +I MY+ CG D+ VF+ + +++ WN ++ G+ +
Sbjct: 368 GLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGN 427
Query: 182 DVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG-VHGMAAKMGLIGDVFVSNA 240
+ L +F + + +LKPD TF V+ AC V G + M +K + +
Sbjct: 428 EALEMFSRMC-EVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTC 486
Query: 241 LIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICG 275
+I M G+ ++E +L MP E N V W +++
Sbjct: 487 VIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAA 522
>gi|110741296|dbj|BAF02198.1| hypothetical protein [Arabidopsis thaliana]
Length = 727
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 124/238 (52%), Gaps = 11/238 (4%)
Query: 66 FLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHE-LVS 124
F++ + TL S + +A+SL ++A L QAC ++++ G +H ++S
Sbjct: 29 FVEGLRTLVR-SGDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLS 87
Query: 125 ASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVL 184
+S + I+ LI MY+ CG L +R+VFD++ RN+ W AL++G+ + +
Sbjct: 88 HPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGF 147
Query: 185 SIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAM 244
+F + S P+ FT V+ +C G VHG+A K+GL ++V+NA+I+M
Sbjct: 148 CLFSSMLS--HCFPNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISM 201
Query: 245 YGKC---AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
YG+C A E +FE + +NLV+WNS+I F ++ + ++M GF
Sbjct: 202 YGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGF 259
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 135 INTRLITMYS-LCGFPLDSRRVFDSL-KTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
+ T LI +YS + D ++F + R++ WN +++ F + + +F +L
Sbjct: 304 VATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDP-ERAIHLFGQLRQ 362
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ +L PD +TF V+KAC G+ +H K G + D ++N+LI Y KC ++
Sbjct: 363 E-KLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLD 421
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENG 280
+++F+ M R++VSWNS++ +S +G
Sbjct: 422 LCMRVFDDMDSRDVVSWNSMLKAYSLHG 449
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC---GFPLDSRRVFDSL 159
+L +C +E GK+VH L + ++ N +I+MY C ++ VF+++
Sbjct: 167 VLTSCRYEP----GKQVHGLALKLGLHCSIYVANA-VISMYGRCHDGAAAYEAWTVFEAI 221
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
K +NL WN++++ F L + +F+ + SD + D T + + +D+
Sbjct: 222 KFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDG-VGFDRATLLNICSSLYKSSDLVPN 280
Query: 220 S------GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE----RNLVSW 269
+H + K GL+ V+ ALI +Y + +E+ +++ E R++V+W
Sbjct: 281 EVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSE--MLEDYTDCYKLFMEMSHCRDIVAW 338
Query: 270 NSIICGFS 277
N II F+
Sbjct: 339 NGIITAFA 346
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
+V ++N LI MY KC + ++F+ MPERN+VSW ++I G+ + G E F L M+
Sbjct: 95 NVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML 154
Query: 294 GCEEGFIPDVITVVTVL 310
P+ T+ +VL
Sbjct: 155 S---HCFPNEFTLSSVL 168
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F D ++N LI Y+ CG RVFD + +R++ WN+++ ++ + +L +F
Sbjct: 400 FLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQ 459
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
++ ++ PD+ TF ++ AC V G
Sbjct: 460 KM----DINPDSATFIALLSACSHAGRVEEG 486
>gi|356545955|ref|XP_003541398.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Glycine max]
Length = 667
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 113/215 (52%), Gaps = 5/215 (2%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A G LQ C + + GK++H + + ++F+ ++LI YS +R+VFD+
Sbjct: 36 AYGSALQHCSDHRLLRQGKQLHARLILLSVTPDNFLA-SKLILFYSKSNHAHFARKVFDT 94
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIF--VELSSDTELKPDNFTFPCVIKA-CGGIAD 215
RN F WNA++ G++ N ++ L++F S+ PDNFT CV+KA
Sbjct: 95 TPHRNTFTWNAMLLGYSFNSMFRHALNLFGSFTFSTTPNASPDNFTISCVLKALASSFCS 154
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
VH + + GL D+FV NALI Y +C V +F+ M ER++V+WN++I G
Sbjct: 155 PELAKEVHCLILRRGLYSDIFVLNALITCYCRCDEVWLARHVFDGMSERDIVTWNAMIGG 214
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+S+ E L ++M+ P+V+T V+V+
Sbjct: 215 YSQRRLYDECKRLYLEMLNV-SAVAPNVVTAVSVM 248
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 34/229 (14%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
E+ K VH L+ +S+ F++N LIT Y C +R VFD + R++ WNA++ G
Sbjct: 156 ELAKEVHCLILRRGLYSDIFVLNA-LITCYCRCDEVWLARHVFDGMSERDIVTWNAMIGG 214
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
+++ LY + +++E+ + + + P+ T V++ACG D+ FG +H + G+
Sbjct: 215 YSQRRLYDECKRLYLEMLNVSAVAPNVVTAVSVMQACGQSMDLAFGMELHRFVKESGIEI 274
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES-------- 285
DV +SNA++AMY KC ++ ++FE M E++ V++ +II G+ + G ++
Sbjct: 275 DVSLSNAVVAMYAKCGRLDYAREMFEGMREKDEVTYGAIISGYMDYGLVDDAMGVFRGVE 334
Query: 286 -----------------------FDLLIKMMGCEEGFIPDVITVVTVLP 311
FDL+ +M G G P+ +T+ ++LP
Sbjct: 335 NPGLNMWNAVISGMVQNKQFEGVFDLVRQMQG--SGLSPNAVTLASILP 381
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 111/239 (46%), Gaps = 35/239 (14%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++QACG D+ G +H V S D ++ ++ MY+ CG +R +F+ ++ +
Sbjct: 247 VMQACGQSMDLAFGMELHRFVKESG-IEIDVSLSNAVVAMYAKCGRLDYAREMFEGMREK 305
Query: 163 N-------------------------------LFQWNALVSGFTKNELYTDVLSIFVELS 191
+ L WNA++SG +N+ + V + ++
Sbjct: 306 DEVTYGAIISGYMDYGLVDDAMGVFRGVENPGLNMWNAVISGMVQNKQFEGVFDLVRQMQ 365
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ L P+ T ++ + +++ G VHG A + G +V+VS ++I YGK +
Sbjct: 366 G-SGLSPNAVTLASILPSFSYFSNLRGGKEVHGYAIRRGYEQNVYVSTSIIDAYGKLGCI 424
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F++ R+L+ W SII ++ +G + + L +M+ ++G PD +T+ +VL
Sbjct: 425 CGARWVFDLSQSRSLIIWTSIISAYAAHGDAGLALGLYAQML--DKGIRPDPVTLTSVL 481
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 12/187 (6%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK VH + + + ++T +I Y G +R VFD ++R+L W +++S +
Sbjct: 392 GKEVHGY-AIRRGYEQNVYVSTSIIDAYGKLGCICGARWVFDLSQSRSLIIWTSIISAYA 450
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGSGVHGMAAKMGLIG 233
+ L ++ ++ D ++PD T V+ AC G+ D + + M +K G+
Sbjct: 451 AHGDAGLALGLYAQM-LDKGIRPDPVTLTSVLTACAHSGLVDEAWNI-FNSMPSKYGIQP 508
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENGFSCESFDLLIKM 292
V ++ + + + E V+ MP E + W ++ G S G D+ I
Sbjct: 509 LVEHYACMVGVLSRAGKLSEAVQFISEMPIEPSAKVWGPLLHGASVFG------DVEIGK 562
Query: 293 MGCEEGF 299
C+ F
Sbjct: 563 FACDHLF 569
>gi|356504054|ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Glycine max]
Length = 563
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 124/238 (52%), Gaps = 12/238 (5%)
Query: 82 KALSLLQENLH-NADLKEATGV-LLQACGHEKDIEIGKRVHELVSA-------STQFSND 132
+AL + ++ H N + E T V L AC H +DI+ G+ VH+ + ST SN
Sbjct: 188 EALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQRIRKAGYDPFMSTSNSN- 246
Query: 133 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
I+ T ++ MY+ CG +R +F+ + RN+ WN++++ + + E + + L +F ++ +
Sbjct: 247 IILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQEALDLFFDMWT 306
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ + PD TF V+ C + G VH K G+ D+ ++ AL+ MY K +
Sbjct: 307 -SGVYPDKATFLSVLSVCAHQCALALGQTVHAYLLKTGIATDISLATALLDMYAKTGELG 365
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F + ++++V W S+I G + +G E+ + + M + +PD IT + VL
Sbjct: 366 NAQKIFSSLQKKDVVMWTSMINGLAMHGHGNEALSMF-QTMQEDSSLVPDHITYIGVL 422
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 21/216 (9%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSR--------R 154
LL C +++ K++H L+ + + +I + L F +DS
Sbjct: 10 LLAKCKSMREL---KKLHGLIVTTPTIKS-------IIPLSKLIDFCVDSEFGDINYADL 59
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
V + +++ WN+++ GF + + ++ ++ + PD+FTFP V+KAC IA
Sbjct: 60 VLRQIHNPSVYIWNSMIRGFVNSHNPRMSMLLYRQMIENG-YSPDHFTFPFVLKACCVIA 118
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
D G +H K G D + + L+ MY CA ++ +K+F+ +P+ N+V+W +I
Sbjct: 119 DQDCGKCIHSCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPKWNVVAWTCLIA 178
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G+ +N E+ + M P+ IT+V L
Sbjct: 179 GYVKNNQPYEALKVFEDM--SHWNVEPNEITMVNAL 212
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 87/181 (48%), Gaps = 5/181 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C H+ + +G+ VH + T + D + T L+ MY+ G +++++F SL+ +
Sbjct: 319 VLSVCAHQCALALGQTVHAYL-LKTGIATDISLATALLDMYAKTGELGNAQKIFSSLQKK 377
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W ++++G + + LS+F + D+ L PD+ T+ V+ AC + V
Sbjct: 378 DVVMWTSMINGLAMHGHGNEALSMFQTMQEDSSLVPDHITYIGVLFACSHVGLVEEAKKH 437
Query: 223 HGMAAKM-GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII--CGFSE 278
+ +M G++ ++ + + E +L E M + N+ W +++ C E
Sbjct: 438 FRLMTEMYGMVPGREHYGCMVDLLSRAGHFREAERLMETMTVQPNIAIWGALLNGCQIHE 497
Query: 279 N 279
N
Sbjct: 498 N 498
>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
Length = 679
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 121/229 (52%), Gaps = 8/229 (3%)
Query: 68 QEITTLCEESKSLNK---ALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVS 124
+ ++TL + + L + A+ LQ+ +ADLKE V+ Q+C + G+R+H+L+
Sbjct: 4 RRLSTLLSKRQQLGQIAAAIDALQKR-KDADLKECVRVI-QSCARLGALAEGRRIHQLMR 61
Query: 125 ASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVL 184
+D ++ L+ MY CG ++R VF++ +N+F W L++ ++ + L
Sbjct: 62 -RVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEAL 120
Query: 185 SIFVELSSDTELKPDNFTFPCVIKAC-GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIA 243
++F E+ ++P + +F I AC G + G +H + + G V + +L++
Sbjct: 121 ALFYEMLKQG-IQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVS 179
Query: 244 MYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
MY KC +EE ++ FE M E N VSWN++I F+E+ E+ L KM
Sbjct: 180 MYSKCGSLEESMRTFESMTEPNAVSWNAMIAAFAEHRRGLEALRTLQKM 228
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 102/203 (50%), Gaps = 4/203 (1%)
Query: 109 HEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWN 168
H + +E + + ++ + +D ++ T L+ MY+ C D+ F L+ N+ WN
Sbjct: 215 HRRGLEALRTLQKMFLEGIRACSDVVVGTTLVNMYAKCSGLHDANAAFVKLQEPNIITWN 274
Query: 169 ALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK 228
L+S + ++ + + + +F + L+ D TF ++ AC + G +H +
Sbjct: 275 VLISAYVQHCCFKEAMELFRRMLL-LGLEMDEVTFINILGACCVPVALEDGRAIHACVRE 333
Query: 229 MGLIGD-VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFD 287
L + + N ++ MYGKC +++ +F+ M + ++++WN++I + ++G + E+
Sbjct: 334 HPLASNHAPLENVILNMYGKCGSLQDAEAMFKSMSQPDVIAWNTMIAAYGQHGHTSEALR 393
Query: 288 LLIKMMGCEEGFIPDVITVVTVL 310
M EEG +PD T V+V+
Sbjct: 394 FYELMQ--EEGVVPDDYTYVSVI 414
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
VI++C + + G +H + ++GL DV+VSN L+ MYGKC +EE +FE P +N
Sbjct: 40 VIQSCARLGALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKN 99
Query: 266 LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ SW +I +++G S E+ L +M+ ++G P ++ +
Sbjct: 100 VFSWTILITVCAQHGRSQEALALFYEML--KQGIQPHSVSFTAAI 142
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 8/183 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E G+ +H V SN + ++ MY CG D+ +F S+
Sbjct: 311 ILGACCVPVALEDGRAIHACVREHPLASNHAPLENVILNMYGKCGSLQDAEAMFKSMSQP 370
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN +++ + ++ ++ L F EL + + PD++T+ VI A A+ G
Sbjct: 371 DVIAWNTMIAAYGQHGHTSEALR-FYELMQEEGVVPDDYTYVSVIDA--SCANAGLPEEA 427
Query: 223 HG----MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFS 277
H M G+ ++ GK + + L + MP E ++++W S +
Sbjct: 428 HAYFVSMQQDHGVRPGGGHYGCMVESLGKAGRLSDAETLIQCMPFEPDVLTWTSFLANCR 487
Query: 278 ENG 280
+G
Sbjct: 488 SHG 490
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 118/224 (52%), Gaps = 30/224 (13%)
Query: 85 SLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYS 144
SL Q HN L L Q C +++E ++H + F++ F+ ++RL+ +YS
Sbjct: 9 SLQQYLPHNLHLS-----LFQTCSAPQEVE---QLHAFSLKTAIFNHPFV-SSRLLALYS 59
Query: 145 L-----CGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
G+ +R +FD ++ R+L WN ++ + +N+ D + +F EL E PD
Sbjct: 60 DPKINDLGY---ARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVH--EYLPD 114
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
NFT PCVIK C + V G +HG+A K+G DVFV +L+ MY KC ++ K+F+
Sbjct: 115 NFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFD 174
Query: 260 VMPER-----------NLVSWNSIICGFSENGFSCESFDLLIKM 292
M ++ NLVSWN++I G+ ++G + +L +M
Sbjct: 175 GMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQM 218
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 44/249 (17%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD----- 157
+++ C ++ GK++H L + F +D + L+ MYS CG +R+VFD
Sbjct: 121 VIKGCARLGVVQEGKQIHGL-ALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDK 179
Query: 158 ------SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS-----------SDTEL---- 196
SL NL WNA+++G+ K+ + L +F ++ + EL
Sbjct: 180 DVVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQF 239
Query: 197 ---------------KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNAL 241
+P + T V+ A G+A +G G +H K G D + +L
Sbjct: 240 MDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSL 299
Query: 242 IAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIP 301
I MY KC +E + +F + ++ + W +II G +G + + L ++M C+ G P
Sbjct: 300 IEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEM--CKTGLKP 357
Query: 302 DVITVVTVL 310
+ I + VL
Sbjct: 358 NAIIFIGVL 366
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 4/167 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+ +H + + F D I+ T LI MY+ CG + VF +++ + + W A++ G
Sbjct: 277 GRWIHSYMEKNG-FELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLG 335
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+ + L++F+E+ T LKP+ F V+ AC V G M I
Sbjct: 336 IHGMANHALALFLEMCK-TGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPT 394
Query: 236 FVS-NALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENG 280
L+ + + +EE E MP N V W S++ G +G
Sbjct: 395 LEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHG 441
>gi|242035545|ref|XP_002465167.1| hypothetical protein SORBIDRAFT_01g033280 [Sorghum bicolor]
gi|241919021|gb|EER92165.1| hypothetical protein SORBIDRAFT_01g033280 [Sorghum bicolor]
Length = 564
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 106/204 (51%), Gaps = 5/204 (2%)
Query: 107 CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQ 166
CG E+ K VH V D I ++ MY+ ++ VFD+L R++
Sbjct: 282 CGDERG---AKSVHCYVRRRGWDVGDIIAGNAVVDMYAKLSKIDAAQMVFDNLPDRDVVS 338
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
WN L++G+ +N L + + I+ ++ + LKP TF ++ A + + G +H ++
Sbjct: 339 WNTLITGYMQNGLSNEAVRIYNDMQNHEGLKPIQGTFVSILPAYSNLGALQQGMRMHALS 398
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
K GL DV+VS LI +Y KC + E + LFE MP R+ WN+II G +G ++
Sbjct: 399 IKTGLNLDVYVSTCLIDLYAKCGKLVEAMLLFEHMPRRSTGPWNAIIAGLGVHGHGAKAL 458
Query: 287 DLLIKMMGCEEGFIPDVITVVTVL 310
+L +M +EG PD +T V++L
Sbjct: 459 NLFSQMQ--QEGIKPDNVTFVSLL 480
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 91/171 (53%), Gaps = 3/171 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+ Y G ++ RVFD + R++ WNA++SG +N D +++F + + +
Sbjct: 108 LVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNARAVDAVALFGRMVGEG-VAG 166
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D T V+ C + D +H A K GL G++FV NALI +YGK + E +F
Sbjct: 167 DAVTLSSVLPMCVLLGDRALALVMHVYAVKRGLSGELFVCNALIDVYGKLGMLVEARWVF 226
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
M R+LV+WNSII + + G + +L MM + G PDV+T+V++
Sbjct: 227 GGMALRDLVTWNSIISAYEQGGKVAAAVELFHGMM--KSGVSPDVLTLVSL 275
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 70/117 (59%), Gaps = 6/117 (5%)
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG-DVFVSNALIAMYGKCAFVEEM 254
L+PD+FTFP +++A G A + H A ++GL+ +VF S +L+ Y + V E
Sbjct: 65 LRPDSFTFPPLVRAAPGPASA---AQFHACALRLGLLHPNVFASGSLVHAYLRFGRVAEA 121
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++F+ MPER++ +WN+++ G N + ++ L +M+G EG D +T+ +VLP
Sbjct: 122 YRVFDEMPERDVPAWNAMLSGLCRNARAVDAVALFGRMVG--EGVAGDAVTLSSVLP 176
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 98/199 (49%), Gaps = 9/199 (4%)
Query: 81 NKALSLLQENLHNADLKEATGV---LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
N+A+ + + ++ LK G +L A + ++ G R+H L S T + D ++T
Sbjct: 353 NEAVRIYNDMQNHEGLKPIQGTFVSILPAYSNLGALQQGMRMHAL-SIKTGLNLDVYVST 411
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
LI +Y+ CG +++ +F+ + R+ WNA+++G + L++F ++ + +K
Sbjct: 412 CLIDLYAKCGKLVEAMLLFEHMPRRSTGPWNAIIAGLGVHGHGAKALNLFSQMQQEG-IK 470
Query: 198 PDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
PDN TF ++ AC G+ D G S M G++ ++ M G+ ++E
Sbjct: 471 PDNVTFVSLLAACSHAGLVDQGR-SFFDLMQTVYGIVPIAKHYACMVDMLGRAGQLDEAF 529
Query: 256 KLFEVMPER-NLVSWNSII 273
+ + MP + + W +++
Sbjct: 530 EFIQGMPIKPDSAVWGALL 548
>gi|302774729|ref|XP_002970781.1| hypothetical protein SELMODRAFT_11658 [Selaginella moellendorffii]
gi|300161492|gb|EFJ28107.1| hypothetical protein SELMODRAFT_11658 [Selaginella moellendorffii]
Length = 517
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 120/228 (52%), Gaps = 13/228 (5%)
Query: 86 LLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSL 145
+LQ ++H D L AC D+E GK +HE + S++ D + T LI+MYS
Sbjct: 90 MLQRSIHAIDSTTYVSAL-SACSALGDLETGKSIHERI-LSSKLEIDAFLGTALISMYSK 147
Query: 146 CGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPC 205
CG ++ FD + +++ WNA+++ F +N L+ F + EL+P+N T
Sbjct: 148 CGCLEEAHECFDCVLRKDIVVWNAMIAAFAQNGHPQRALNFFHAIPRG-ELQPNNLTLVS 206
Query: 206 VIKACGGIADVGFGSGVHGM---AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ AC +A + G +H + + ++ L G + NAL+ +YGKC + +F+ +
Sbjct: 207 ALDACSDLAALEEGRKIHALIESSPELTLGGS--MGNALVNLYGKCGRAIDARAVFDALR 264
Query: 263 ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
R +VSW S+I +++NG S ++ +L +M P+ +T+++VL
Sbjct: 265 PRTVVSWTSMIAAYAQNGHSDQALELFQRM-----DMAPNGVTLLSVL 307
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 106/208 (50%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C ++ + G+R+H + + + N L+ MY CG ++R +FD R
Sbjct: 4 LLRQCSKQRSLHSGRRLHAQILRHRLDRHTLLCNL-LVQMYGRCGCLDEARSIFDKTPER 62
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NLF W+ +++ + +N T L+++ E+ + D+ T+ + AC + D+ G +
Sbjct: 63 NLFSWSIMIAAYAQNGHPTFALAVYREMLQRSIHAIDSTTYVSALSACSALGDLETGKSI 122
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H L D F+ ALI+MY KC +EE + F+ + +++V WN++I F++NG
Sbjct: 123 HERILSSKLEIDAFLGTALISMYSKCGCLEEAHECFDCVLRKDIVVWNAMIAAFAQNGHP 182
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + + E P+ +T+V+ L
Sbjct: 183 QRALNFFHAIPRGE--LQPNNLTLVSAL 208
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 104/207 (50%), Gaps = 7/207 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC +E G+++H L+ +S + + + L+ +Y CG +D+R VFD+L+ R
Sbjct: 208 LDACSDLAALEEGRKIHALIESSPELTLGGSMGNALVNLYGKCGRAIDARAVFDALRPRT 267
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF-GSGV 222
+ W ++++ + +N L +F + ++ P+ T V++AC G +
Sbjct: 268 VVSWTSMIAAYAQNGHSDQALELFQRM----DMAPNGVTLLSVLQACSEHRKGSHAGKTI 323
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G G + +AL+ MYGK ++ + +F M ER+ ++W ++I ++++G S
Sbjct: 324 HAHIRLAGFDGSPLLDSALVNMYGKVGNLDSAMVVFTQMRERDAITWTAMISSYAQHGHS 383
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTV 309
++ L M+ +G D +T+ V
Sbjct: 384 RQALSLFSSML--LDGIATDAVTLACV 408
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 13/184 (7%)
Query: 103 LLQACG-HEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+LQAC H K GK +H + + F ++++ L+ MY G + VF ++
Sbjct: 306 VLQACSEHRKGSHAGKTIHAHIRLAG-FDGSPLLDSALVNMYGKVGNLDSAMVVFTQMRE 364
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG-- 219
R+ W A++S + ++ LS+F + D + D T CV AC DV G
Sbjct: 365 RDAITWTAMISSYAQHGHSRQALSLFSSMLLDG-IATDAVTLACVSSACSHSGDVKLGWD 423
Query: 220 ---SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICG 275
S V + V +S+ M + ++E L MP + +LVSW +++
Sbjct: 424 YFVSSVRDFGERPTFEHYVVMSD----MLSRAGRLQEAEDLLRSMPFQPDLVSWRTLLSA 479
Query: 276 FSEN 279
S +
Sbjct: 480 CSNH 483
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 3/203 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ +ACG + G H L + SN F+ N L+ MYS CG D+R+VFD +
Sbjct: 133 VFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNA-LVAMYSRCGSLSDARKVFDEMPVW 191
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+++ + K L +F +++++ +PD+ T V+ C + G
Sbjct: 192 DVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQF 251
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A +I ++FV N L+ MY K ++E +F MP +++VSWN+++ G+S+ G
Sbjct: 252 HGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRF 311
Query: 283 CESFDLLIKMMGCEEGFIPDVIT 305
++ L +M EE DV+T
Sbjct: 312 EDAVRLFEQMQ--EEKIKMDVVT 332
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 86/148 (58%), Gaps = 2/148 (1%)
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
++ WN+L+ + N LS F + S PDN+TFP V KACG I+ V G H
Sbjct: 92 VYHWNSLIRSYGNNGRANKCLSSFCLMHS-LSWTPDNYTFPFVFKACGEISSVRCGDSSH 150
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
++ G + +VFV NAL+AMY +C + + K+F+ MP ++VSWNSII +++ G
Sbjct: 151 ALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPK 210
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ ++ KM E GF PD IT+V VLP
Sbjct: 211 MALEMFSKMTN-EFGFRPDDITLVNVLP 237
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 98/183 (53%), Gaps = 7/183 (3%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSL--KTRNLFQWNALVSGFTKNELYTDVLSIFVE 189
+ +IN +LI MY+ C +R +FDSL K R++ W ++ G++++ L + E
Sbjct: 407 NMVIN-QLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSE 465
Query: 190 L-SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG-DVFVSNALIAMYGK 247
+ D + +P+ FT C + AC +A + G +H A + +FVSN LI MY K
Sbjct: 466 MFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAK 525
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
C + + +F+ M E+N V+W S++ G+ +G+ E+ + +M GF D +T++
Sbjct: 526 CGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMR--RIGFKLDGVTLL 583
Query: 308 TVL 310
VL
Sbjct: 584 VVL 586
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 11/201 (5%)
Query: 81 NKALSLLQENLHNADLKEATGVL-----LQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
NKAL LL E + D + L AC + IGK++H + Q + +
Sbjct: 457 NKALELLSE-MFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFV 515
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
+ LI MY+ CG D+R VFD++ +N W +L++G+ + + L IF E+
Sbjct: 516 SNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRR-IG 574
Query: 196 LKPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
K D T V+ AC G+ D G + M G+ L+ + G+ +
Sbjct: 575 FKLDGVTLLVVLYACSHSGMIDQGM-EYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNA 633
Query: 254 MVKLFEVMP-ERNLVSWNSII 273
++L E MP E V W +++
Sbjct: 634 ALRLIEEMPMEPPPVVWVALL 654
>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
Length = 751
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 111/220 (50%), Gaps = 30/220 (13%)
Query: 98 EATGVLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
E G LLQ C +E+ + G+++H ++V F+ + I T+L+ Y+ C P S +F
Sbjct: 11 EVYGELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASNSLF 70
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
++ +N+F W A++ + Y + L F E+ + L PDNF P V+KACGG+ +
Sbjct: 71 RRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENG-LLPDNFVLPNVLKACGGLEWI 129
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM------VKLFEVMPERNLVSWN 270
G VHG+ + C +V +M K MP+RN V+WN
Sbjct: 130 RIGKVVHGLVS--------------------CGYVWKMWGGGGCKKGVCGMPQRNAVAWN 169
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S+I G+ +NG + E+ ++ +M EEG P +T+ + L
Sbjct: 170 SMIVGYVQNGLNEEAIEVFYEMR--EEGVEPTQVTLSSFL 207
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 77/148 (52%), Gaps = 3/148 (2%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL W L+SG ++ + + F + + +KP+ + V+ AC +A + G +
Sbjct: 436 NLVTWTTLISGLARSGFGYEAILTFQRMQ-EAGVKPNVVSIIGVLLACINLASLQIGRAL 494
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG + L + ++ +L+ MY KC ++ ++F+++P++ L +N++I GF+ +G +
Sbjct: 495 HGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDKELPIYNAMISGFALHGQA 554
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L + EEG PD IT L
Sbjct: 555 VEALALYRCLK--EEGLKPDNITFTNAL 580
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLD------SRRVF 156
+L+ACG + I IGK VH LVS CG+ ++
Sbjct: 119 VLKACGGLEWIRIGKVVHGLVS---------------------CGYVWKMWGGGGCKKGV 157
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
+ RN WN+++ G+ +N L + + +F E+ + ++P T + A + +
Sbjct: 158 CGMPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEG-VEPTQVTLSSFLSASANLGAL 216
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G H +A G+ + ++LI Y K +E+ +F M E+++V+WN +I G+
Sbjct: 217 QDGKQGHAIAVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGY 276
Query: 277 SENG 280
+ G
Sbjct: 277 VQIG 280
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 32/193 (16%)
Query: 87 LQENLHNADLKEATGVLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSL 145
+QE ++ GVLL AC + ++IG+ +H L+ S S I T L+ MY+
Sbjct: 463 MQEAGVKPNVVSIIGVLL-ACINLASLQIGRALHGYLIRHSLYLS--IPIATSLVDMYAK 519
Query: 146 CGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPC 205
CG ++RVFD + + L +NA++SGF + + L+++ L + LKPDN TF
Sbjct: 520 CGDRDQAKRVFDMIPDKELPIYNAMISGFALHGQAVEALALYRCLKEEG-LKPDNITFTN 578
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVS-------NALIAMYG-------KCAFV 251
+ AC H M GL ++FV N I YG +C +
Sbjct: 579 ALYACS-----------HAMMVSEGL--ELFVDMVSNHNINPSIEHYGCMVSLLSRCGDL 625
Query: 252 EEMVKLFEVMPER 264
+E L MP +
Sbjct: 626 DEAFGLISAMPYK 638
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ + LI YS G D+ VF + +++ WN L+SG+ + L++ L
Sbjct: 237 LGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNM-CHLMRLE 295
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
L+ D+ T ++ A + ++ G H + L DV V ++++ MY KC +
Sbjct: 296 NLRFDSVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCA 355
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
++F ++L+ WN+++ F+E G S E+ +L +M E P+VI+
Sbjct: 356 RRVFNSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQ--LESVPPNVIS 404
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E K HE+ + F N ++ Y+ G +F+ + RN+F WNAL+
Sbjct: 250 VEARKLFHEMPNRDVMFWNT------VLKGYATNGNVEALEGLFEEMPERNIFSWNALIG 303
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G+ N L+ +VL F + S++++ P++ T V+ AC + + G VH A GL
Sbjct: 304 GYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLK 363
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
G+V+V NAL+ MY KC +E + +F M ++L+SWN++I G + + ++ +L +M
Sbjct: 364 GNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQM 423
Query: 293 MGCEEGFIPDVITVVTVL 310
G PD IT + +L
Sbjct: 424 KNA--GQKPDGITFIGIL 439
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 100/183 (54%), Gaps = 9/183 (4%)
Query: 96 LKEATGVLLQACGHEKDIEIGKRVHELVSA--STQFSNDFIINTRLITMYSLCGFPLDSR 153
L+E LLQ+C + K+VH++ + + F + I +L+T+ + +R
Sbjct: 37 LEERFISLLQSC------KTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYAR 90
Query: 154 RVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
++FD + N+ WN++ G+ ++E Y +V+ +F ++ +++P+ FTFP V+K+CG I
Sbjct: 91 QLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKG-MDIRPNCFTFPVVLKSCGKI 149
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
+ G VH K G G+ FV LI MY V + K+F M ERN+V+W S+I
Sbjct: 150 NALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMI 209
Query: 274 CGF 276
G+
Sbjct: 210 NGY 212
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 108/244 (44%), Gaps = 21/244 (8%)
Query: 36 NKHSLRSIFKE---KSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLH 92
N +L +F+E ++ S +A + GL F E S + LS +
Sbjct: 279 NVEALEGLFEEMPERNIFSWNALIGGYAHNGLFF--------EVLGSFKRMLSESDVPPN 330
Query: 93 NADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDS 152
+A L +L AC +++GK VH +S N ++ N L+ MY+ CG ++
Sbjct: 331 DATLV----TVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNA-LMDMYAKCGIIENA 385
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG- 211
VF + T++L WN L+ G + D L++F ++ + + KPD TF ++ AC
Sbjct: 386 ISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQ-KPDGITFIGILCACTH 444
Query: 212 -GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSW 269
G+ + GF MA ++ + ++ M + +E+ + MP E + V W
Sbjct: 445 MGLVEDGFAY-FQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIW 503
Query: 270 NSII 273
++
Sbjct: 504 AGLL 507
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 86/224 (38%), Gaps = 52/224 (23%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSAS-----------TQFSNDFIINTRLITMYSLC 146
E L CG + +G + ++ SA F + + T +I Y L
Sbjct: 156 EQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILS 215
Query: 147 GFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCV 206
+ +RR+FD R++ WN +VSG+ + + +F E+ +
Sbjct: 216 ADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNR------------- 262
Query: 207 IKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNL 266
DV N ++ Y VE + LFE MPERN+
Sbjct: 263 ---------------------------DVMFWNTVLKGYATNGNVEALEGLFEEMPERNI 295
Query: 267 VSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
SWN++I G++ NG E +M+ E P+ T+VTVL
Sbjct: 296 FSWNALIGGYAHNGLFFEVLGSFKRML-SESDVPPNDATLVTVL 338
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 126/232 (54%), Gaps = 6/232 (2%)
Query: 81 NKALSLLQENLHNADL-KEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
+KAL L + + +L E T V ++ AC I G+++H S + + +
Sbjct: 302 DKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHG-YSLKLGYELQLYVLSA 360
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+ MY+ CG +D+R+ F+ ++ ++ W ++++G+ +N Y L+++ ++ + P
Sbjct: 361 LVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVI-P 419
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
++ T V+KAC +A + G +H K ++ + +AL AMY KC +++ ++F
Sbjct: 420 NDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIF 479
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
MP R+++SWN++I G S+NG E +L KM C EG PD +T V +L
Sbjct: 480 WRMPARDVISWNAMISGLSQNGRGNEGLELFEKM--CLEGTKPDNVTFVNLL 529
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 4/200 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
D G++ H L + T S+D + L+ MY G ++R +FD + RN W ++
Sbjct: 131 DSRAGRQAHAL-AVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMI 189
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDN-FTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
SG+ EL + +F + + + K +N F F V+ A V G VH +A K G
Sbjct: 190 SGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNG 249
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
L+ V V+NAL+ MY KC +E+ +K FE+ +N ++W++++ GF++ G S ++ L
Sbjct: 250 LVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFY 309
Query: 291 KMMGCEEGFIPDVITVVTVL 310
M + G +P T+V V+
Sbjct: 310 DMH--QSGELPSEFTLVGVI 327
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 6/198 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L C K + G+ +H + + FS+ I N+ LI +Y+ C + VFDS+ ++
Sbjct: 17 LVHCTRHKQLRKGRALHARILVTGSFSSTQIANS-LINLYAKCSHFSKANLVFDSINNKD 75
Query: 164 LFQWNALVSGFTKNELYT---DVLSIFVEL-SSDTELKPDNFTFPCVIKACGGIADVGFG 219
+ WN L++ F++ + + V+ +F +L + + P+ T V A ++D G
Sbjct: 76 VVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAG 135
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
H +A K DVF +++L+ MY K V E LF+ MPERN VSW ++I G++
Sbjct: 136 RQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQ 195
Query: 280 GFSCESFDLLIKMMGCEE 297
+ E+F+L K+M EE
Sbjct: 196 ELADEAFELF-KLMRHEE 212
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC + ++ GK++H + FS + I + L MY+ CG D R+F + R
Sbjct: 427 VLKACSNLAALDQGKQMHAGI-IKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPAR 485
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGF 218
++ WNA++SG ++N + L +F ++ + KPDN TF ++ AC G+ D G+
Sbjct: 486 DVISWNAMISGLSQNGRGNEGLELFEKMCLEGT-KPDNVTFVNLLSACSHMGLVDRGW 542
>gi|302787038|ref|XP_002975289.1| hypothetical protein SELMODRAFT_10002 [Selaginella moellendorffii]
gi|300156863|gb|EFJ23490.1| hypothetical protein SELMODRAFT_10002 [Selaginella moellendorffii]
Length = 730
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 110/207 (53%), Gaps = 7/207 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + +E GK++H + A + + + LI+MYS CG +D++R FD + RN
Sbjct: 86 LGACSSAEFLETGKKIHAQIVAG-EVELELNLANSLISMYSNCGSLVDAKRFFDGMNRRN 144
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN +++ F+ + Y + + +F E+ KPD +F V AC + D+ G +H
Sbjct: 145 VVSWNCIIAAFSGHGHYREAVDLFYEMEKQG-FKPDRVSFVSVFSACSILEDLSQGRRIH 203
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ DV + N L+ MY +C +++ +F+ + RN+VSW S+I +++
Sbjct: 204 ARFCDGRMKLDVSIGNTLLNMYARCGSLDDARLVFDSITSRNIVSWTSMIAAYAQFDRFH 263
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
+++++ KM G P+ +T +T+L
Sbjct: 264 DAYEVFQKM-----GVAPNEVTFITIL 285
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 104/194 (53%), Gaps = 7/194 (3%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
+R+H + A T ++ ++ L+ MY CG ++R FD + +N+F W+ ++ +++
Sbjct: 1 RRIHSEL-ARTGIDSETLLGNTLVQMYGKCGNLAEARAAFDGIAEKNVFSWSIIIGLYSR 59
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF 236
+ L + + +F + +++P+ TF + AC + G +H + ++
Sbjct: 60 HRLSREAIELFHAM----DVRPNCVTFINTLGACSSAEFLETGKKIHAQIVAGEVELELN 115
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCE 296
++N+LI+MY C + + + F+ M RN+VSWN II FS +G E+ DL +M +
Sbjct: 116 LANSLISMYSNCGSLVDAKRFFDGMNRRNVVSWNCIIAAFSGHGHYREAVDLFYEME--K 173
Query: 297 EGFIPDVITVVTVL 310
+GF PD ++ V+V
Sbjct: 174 QGFKPDRVSFVSVF 187
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ AC +D+ G+R+H + D I L+ MY+ CG D+R VFDS+ +R
Sbjct: 186 VFSACSILEDLSQGRRIHARF-CDGRMKLDVSIGNTLLNMYARCGSLDDARLVFDSITSR 244
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W ++++ + + + + D +F ++ + P+ TF ++ AC + +
Sbjct: 245 NIVSWTSMIAAYAQFDRFHDAYEVFQKMG----VAPNEVTFITILGACAEARALKQAREI 300
Query: 223 HGMAAKMGLI--GDVFVSNALIAMYGKCAFVEEMVKLFEVMP--ERNLVSWNSIICGFSE 278
H + G++ + V N LI Y KC + + +FE M ERN+V+W SII
Sbjct: 301 HSLVLTSGILEKQQLTVGNGLINTYAKCGSLSDAKTVFESMATAERNVVTWTSIIAACGL 360
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ L +M EG + IT TVL
Sbjct: 361 CGHPREALALFHRME--LEGIPANEITFGTVL 390
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 36/243 (14%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L AC + +H L+ S + D ++ LI M+ CG D+R +F+ ++
Sbjct: 387 GTVLSACADLGSTREARYLHGLI-VSGGYDRDTVVCNGLINMFGKCGMLEDARAIFERMR 445
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELS----------------------SDTELK- 197
+RNL W ++ + + + +S+F ++ +D LK
Sbjct: 446 SRNLVTWTGMLGAYIQQQEIRQAVSLFQQMERISYKDVMAWTTMVAAYAQAGYADEALKL 505
Query: 198 ----------PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
PD TF ++ AC + G + + GL + N L+ YG
Sbjct: 506 YARMGLEGVAPDEITFVNLLHACSRMGAKKEGWTIRSHILERGLPSSRVLGNGLVCFYGA 565
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVV 307
C + +FE + ER+ +WN+ I ++GF ES L +M+ EG PD IT
Sbjct: 566 CGTWLQAKMVFENLAERDSAAWNAAIGVSGQHGFYDESLRLFERMV--LEGMEPDEITFT 623
Query: 308 TVL 310
VL
Sbjct: 624 NVL 626
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 42/246 (17%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQF-SNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L AC + ++ + +H LV S + LI Y+ CG D++ VF+S+ T
Sbjct: 284 ILGACAEARALKQAREIHSLVLTSGILEKQQLTVGNGLINTYAKCGSLSDAKTVFESMAT 343
Query: 162 --RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDN-FTFPCVIKACGGIADVGF 218
RN+ W ++++ + L++F + + E P N TF V+ AC +
Sbjct: 344 AERNVVTWTSIIAACGLCGHPREALALFHRM--ELEGIPANEITFGTVLSACADLGSTRE 401
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS---------- 268
+HG+ G D V N LI M+GKC +E+ +FE M RNLV+
Sbjct: 402 ARYLHGLIVSGGYDRDTVVCNGLINMFGKCGMLEDARAIFERMRSRNLVTWTGMLGAYIQ 461
Query: 269 ------------------------WNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVI 304
W +++ +++ G++ E+ L +M EG PD I
Sbjct: 462 QQEIRQAVSLFQQMERISYKDVMAWTTMVAAYAQAGYADEALKLYARM--GLEGVAPDEI 519
Query: 305 TVVTVL 310
T V +L
Sbjct: 520 TFVNLL 525
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
++ L+ Y CG L ++ VF++L R+ WNA + ++ Y + L +F + +
Sbjct: 554 VLGNGLVCFYGACGTWLQAKMVFENLAERDSAAWNAAIGVSGQHGFYDESLRLFERMVLE 613
Query: 194 TELKPDNFTFPCVIKACGGIADVGFG-------SGVHGMAAKMGLIGDVFVSNALIAMYG 246
++PD TF V+ +C ++ G HGM + G L ++G
Sbjct: 614 G-MEPDEITFTNVLFSCSHSGEIERAWRWFLVMRGDHGMEPNVEHWG------CLADLFG 666
Query: 247 KCAFVEEMVKLFEVMPE-RNLVSWNSIICGFSENG 280
+ +++E +L +P R ++W +++ G +G
Sbjct: 667 RLGWIDEAERLVSFLPRTRASIAWTTLLSGCKVHG 701
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 113/207 (54%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ AC + + G++VH + + ++ + TRL+TMY CG D+R V D + R+
Sbjct: 17 ITACIERRALWEGRQVHARM-ITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS 75
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W ++SG+++ E + + L +F+++ + P+ +T V+ +C G + G VH
Sbjct: 76 VVSWTTMISGYSQTERHVEALDLFIKMLRAGCI-PNEYTLATVLTSCSGPQSIYQGKQVH 134
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ K +FV ++L+ MY K ++E ++F+ +PER++VS +II G+++ G
Sbjct: 135 SLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDE 194
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL ++ EG + +T T++
Sbjct: 195 EALDLFRQLYS--EGMQCNHVTFTTLV 219
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 114/210 (54%), Gaps = 5/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L +C + I GK+VH L+ T F + + + L+ MY+ ++RRVFD+L
Sbjct: 115 ATVLTSCSGPQSIYQGKQVHSLL-VKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 173
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ A++SG+ + L + L +F +L S+ ++ ++ TF ++ A G+A + +G
Sbjct: 174 ERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEG-MQCNHVTFTTLVTALSGLASLDYGK 232
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH + + L V + N+LI MY KC + ++F+ M ER++VSWN+++ G+ +G
Sbjct: 233 QVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHG 292
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E L + + PD +T++ VL
Sbjct: 293 LGHEVISLFKDL---HKEVKPDSVTLLAVL 319
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 17/169 (10%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
++ GK+VH L+ + + LI MYS CG L SRRVFD++ R++ WNA++
Sbjct: 228 LDYGKQVHALI-LRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLM 286
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVG---FGSGVHGMAA 227
G+ ++ L +V+S+F +L E+KPD+ T V+ C GG+ D G F + V +A
Sbjct: 287 GYGRHGLGHEVISLFKDLHK--EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSA 344
Query: 228 KM--GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
+ G G +I + G+ +E+ + L E MP E W S++
Sbjct: 345 LLHTGHYG------CIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLL 387
>gi|147801011|emb|CAN60119.1| hypothetical protein VITISV_016375 [Vitis vinifera]
Length = 711
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 143/288 (49%), Gaps = 17/288 (5%)
Query: 28 FPATVIQRNKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLL 87
F + +I +NK + F+E S+ +K N + +L+E + S A L
Sbjct: 85 FASLLIAQNKKKILE-FQELSNDDYFSKNNEFAA----WLKEKRKIYFADLSTESARELF 139
Query: 88 QE-----NLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITM 142
E N + K G+L C +K + G +H + + F +D +NT+LI
Sbjct: 140 TEFVKDWNKQKLESKYYEGIL---CIDKKAKKQGHLIHTHL-ITNGFGSDLHLNTKLIIF 195
Query: 143 YSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFT 202
Y G + +R VFD + R++ W A+VSG+++N + +F ++ +K + FT
Sbjct: 196 YVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRH-CGVKANQFT 254
Query: 203 FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ ++AC + + G V G K + ++FV +AL+ + KC +E+ LF M
Sbjct: 255 YGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMM 314
Query: 263 ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
ER++VSWN++I G++ GF+ +SF + M+ G +PD T+ +VL
Sbjct: 315 ERDVVSWNAMIGGYAVQGFADDSFCMFRSML--RGGLVPDCYTLGSVL 360
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 109/211 (51%), Gaps = 5/211 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L+A + I ++H +++ S D I+ LI Y+ G ++ + +
Sbjct: 357 GSVLRASAEGGGLIIANQIHGIITQLGYGSYD-IVTGLLINAYAKNGSLRSAKDLRKGML 415
Query: 161 TRNLFQWNALVSGFTKNELYT-DVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
++LF AL++G+ +Y+ D L +F E++ + D+ ++ C +A G
Sbjct: 416 KKDLFSSTALITGYAHEGIYSVDALDLFKEMNQ-MNIGMDDVILCSMLNICANLASFALG 474
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+ +H A K DV + NALI MY K +E+ + F+ M E+N++SW S+I G++++
Sbjct: 475 TQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKH 534
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G+ + L KM +GF P+ +T +++L
Sbjct: 535 GYGHMAVSLYKKME--SKGFKPNDVTFLSLL 563
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 97/205 (47%), Gaps = 4/205 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G L+AC + +++G +V + +F + + + L+ +S CG D+ +F ++
Sbjct: 256 GSALRACTSLRCLDMGIQVQGCIQKG-RFVENLFVKSALVDFHSKCGKMEDASYLFGTMM 314
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ WNA++ G+ D +F + L PD +T V++A + +
Sbjct: 315 ERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGG-LVPDCYTLGSVLRASAEGGGLIIAN 373
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG+ ++G V+ LI Y K + L + M +++L S ++I G++ G
Sbjct: 374 QIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEG 433
Query: 281 -FSCESFDLLIKMMGCEEGFIPDVI 304
+S ++ DL +M G + DVI
Sbjct: 434 IYSVDALDLFKEMNQMNIG-MDDVI 457
>gi|359480813|ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Vitis vinifera]
Length = 634
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 114/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ C + K + GK++H+ + + F++ T+L+ MY+ CG ++ +FD L
Sbjct: 29 LLQLCSNSKALHQGKQLHQHIILCGLDHHPFML-TKLVQMYADCGDLGSAQALFDKLSQP 87
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+F W A++ +++N L + + + E+ L PD + FP V +ACG + + G V
Sbjct: 88 NVFAWTAILGFYSRNGLSDECVRTYSEMKLKGVL-PDKYVFPKVFRACGQLLWLEVGIQV 146
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G D+ V N+LI MY K V ++F+ M ER+++SWNS+I G+ NGF
Sbjct: 147 HKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGYVCNGFL 206
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
S +LL M GF PD++T TV+
Sbjct: 207 EFSVELLASMR--IRGFEPDMVTWNTVM 232
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 114/267 (42%), Gaps = 20/267 (7%)
Query: 45 KEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLL 104
KE + +SL+ + S G H KSL ++ + DL + VL+
Sbjct: 252 KEPNIISLTTLVSGYSRIGNH-----------EKSLGIFREMMSRRVAFPDLDSLSSVLV 300
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDF-IINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+C H + G+ +H S S+ + L+TMY C D+ VF+ + +
Sbjct: 301 -SCRHLGALVCGQEIHGYGIRSVDSSSFYKSAGAALLTMYVKCKRIQDALNVFELMDRFD 359
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WNA++ GF E+ L F ++ + + + T V+ AC D+ G VH
Sbjct: 360 VVTWNAMILGFVDLEMGHLALECFSKMQR-SGIMNNQITISTVLPAC----DLKSGKQVH 414
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
K + V NALI MY KC + +F M R+LVSWN++I GF +G
Sbjct: 415 AYITKNSFSSVIPVWNALIHMYSKCGCIGTAYSIFSNMISRDLVSWNTMIGGFGMHGLGQ 474
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ LL M P+ +T + L
Sbjct: 475 FALQLLRDM--SHSDVCPNSVTFTSAL 499
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 4/185 (2%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F D + ++ Y G ++ +F+ +K N+ LVSG+++ + L IF
Sbjct: 221 FEPDMVTWNTVMDAYCRMGLCDEAWEIFEQIKEPNIISLTTLVSGYSRIGNHEKSLGIFR 280
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVS--NALIAMYG 246
E+ S PD + V+ +C + + G +HG + + S AL+ MY
Sbjct: 281 EMMSRRVAFPDLDSLSSVLVSCRHLGALVCGQEIHGYGIRSVDSSSFYKSAGAALLTMYV 340
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
KC +++ + +FE+M ++V+WN++I GF + + + KM G + + IT+
Sbjct: 341 KCKRIQDALNVFELMDRFDVVTWNAMILGFVDLEMGHLALECFSKMQ--RSGIMNNQITI 398
Query: 307 VTVLP 311
TVLP
Sbjct: 399 STVLP 403
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
+F +++ C + G +H GL F+ L+ MY C + LF+
Sbjct: 23 SFQLNHLLQLCSNSKALHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSAQALFD 82
Query: 260 VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
+ + N+ +W +I+ +S NG S E +M +G +PD
Sbjct: 83 KLSQPNVFAWTAILGFYSRNGLSDECVRTYSEMK--LKGVLPD 123
>gi|302801247|ref|XP_002982380.1| hypothetical protein SELMODRAFT_447 [Selaginella moellendorffii]
gi|300149972|gb|EFJ16625.1| hypothetical protein SELMODRAFT_447 [Selaginella moellendorffii]
Length = 730
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC KD+ +G +H + S + T L+ MY+ CG +R VFD + ++
Sbjct: 107 LAACSGAKDLALGMAIHARI-LSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQMPHKD 165
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W A+++ F + L E ++P+ TF I AC + G +H
Sbjct: 166 VVSWTAMITAFAQMGDCRQALETL-EGMIQARVQPNPVTFVAAITACSSREFLDRGRKIH 224
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+GL GD+ + NAL++MY K + EE + +F+ M +RN VSWNS+I F+ + SC
Sbjct: 225 AAVIDLGLHGDITIQNALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSC 284
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L M EG PD ++ + VL
Sbjct: 285 SAMGLFHGMN--LEGIKPDDVSFLGVL 309
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 106/211 (50%), Gaps = 9/211 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFP---LDSRRVFDSL 159
LL+ CG + + G+RVH+ + A+ F + LI MY CG D+R VFD +
Sbjct: 4 LLRRCGISRSLADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVFDQM 63
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+++ W+ +++ + + + +++F + +++P+ + AC G D+ G
Sbjct: 64 PKKDVVSWSCIIAAYGQAGHCREAINLFQRM----DVEPNEMVIVSTLAACSGAKDLALG 119
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H L VFV AL+ MY KC +E+ +F+ MP +++VSW ++I F++
Sbjct: 120 MAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQMPHKDVVSWTAMITAFAQM 179
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G ++ + L M+ + P+ +T V +
Sbjct: 180 GDCRQALETLEGMI--QARVQPNPVTFVAAI 208
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 9/216 (4%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L AC + KR+H +L A+ D + L+T Y+ CG + R+F +
Sbjct: 308 VLSACSSTGCLRSCKRIHSQLELAAVHSPPDLSVENSLVTAYAKCGDLEAAERIFQRIPG 367
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N+ W A+++ +T + + L ++ ++ + ++PD+ VI A + DVG
Sbjct: 368 KNVVSWTAMLTAYTFHGNGSKALELYDKMVGQS-IQPDSVVLLNVIYAGSLVGDVGLARK 426
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H A + + + NALI MY +C +EE ++F+ + +NLVSWN+++ + ++G+
Sbjct: 427 LHARVASSSFMLKIQIQNALINMYARCGSLEEARRVFDGIERKNLVSWNAMMGSYVQHGY 486
Query: 282 SCESFDLLIKM-----MGCEEGF--IPDVITVVTVL 310
E+ L +M E G PD I V +L
Sbjct: 487 DEEAIALFSEMKTGNSKAMESGLRSSPDCIMAVILL 522
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 17/213 (7%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
D+ + +++H V AS+ F I LI MY+ CG ++RRVFD ++ +NL WNA++
Sbjct: 420 DVGLARKLHARV-ASSSFMLKIQIQNALINMYARCGSLEEARRVFDGIERKNLVSWNAMM 478
Query: 172 SGFTKNELYTDVLSIFVELS--------SDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ ++ + +++F E+ S PD ++ A G+ + G +H
Sbjct: 479 GSYVQHGYDEEAIALFSEMKTGNSKAMESGLRSSPDCIMAVILLCAHAGLGKLAEGRCIH 538
Query: 224 GMAAKM------GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
+ G +V + NAL++MY +C + + F M R+ V+W+S++ G++
Sbjct: 539 AELCAVNPEILAGSTTNVTLGNALVSMYARCGSMGDASAAFHHMRARDTVTWSSLVAGYA 598
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+G + E LL + M EG PD +T V++L
Sbjct: 599 HHGHA-EYAILLYRDMHL-EGVQPDSVTYVSIL 629
>gi|326499323|dbj|BAK06152.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 109/206 (52%), Gaps = 4/206 (1%)
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNL 164
+AC + G +H S F +D + T L+ +YS CG +R++FD+++ R++
Sbjct: 113 KACADLSALRTGAAIHAH-SILLGFGSDRFVLTALVVLYSKCGQLGVARKLFDAIRDRSV 171
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
WNA++SG+ +N L + ++ E+ + + PD+ TF + AC + G V
Sbjct: 172 VAWNAMISGYEQNGLAERGIGVYKEMQAAKAV-PDSMTFVATLSACAQAGALDLGREVER 230
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCE 284
+ VF+ +AL+ MY +C V++ + F+ + ERN+V+W S+I G+ +G E
Sbjct: 231 RVVSERMDISVFLGSALVNMYARCGVVDKARRWFDALQERNVVTWTSMIAGYGMHGHGRE 290
Query: 285 SFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L +M C EG P+ +T V VL
Sbjct: 291 AIKLF-HLMRC-EGPPPNHVTFVAVL 314
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
+FTF V KAC ++ + G+ +H + +G D FV AL+ +Y KC + KLF+
Sbjct: 105 SFTFTAVAKACADLSALRTGAAIHAHSILLGFGSDRFVLTALVVLYSKCGQLGVARKLFD 164
Query: 260 VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +R++V+WN++I G+ +NG + + +M + +PD +T V L
Sbjct: 165 AIRDRSVVAWNAMISGYEQNGLAERGIGVYKEMQAAKA--VPDSMTFVATL 213
>gi|15234044|ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098703|sp|O49399.2|PP321_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18840
gi|5738365|emb|CAA16741.2| putative protein [Arabidopsis thaliana]
gi|7268678|emb|CAB78886.1| putative protein [Arabidopsis thaliana]
gi|332658697|gb|AEE84097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 545
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 99/172 (57%), Gaps = 2/172 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+I+ Y+ G +++ VFDS+ R++ WNA+V+ + Y +VL +F ++ D+ KP
Sbjct: 243 MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKP 302
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D FT V+ AC + + G VH K G+ + F++ AL+ MY KC +++ +++F
Sbjct: 303 DGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVF 362
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+R++ +WNSII S +G ++ ++ +M+ EGF P+ IT + VL
Sbjct: 363 RATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMV--YEGFKPNGITFIGVL 412
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
+ + + + N F N+++ + + L++F E+ + PD ++F V+KAC
Sbjct: 96 ILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGP-VFPDKYSFTFVLKACAAFC 154
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
G +HG+ K GL+ DVFV N L+ +YG+ + E K+ + MP R+ VSWNS++
Sbjct: 155 GFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLS 214
Query: 275 GFSENGFSCESFDLLIKM 292
+ E G E+ L +M
Sbjct: 215 AYLEKGLVDEARALFDEM 232
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 42/208 (20%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC E G+++H L S ++ F+ NT L+ +Y G+ +R+V D + R
Sbjct: 146 VLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENT-LVNVYGRSGYFEIARKVLDRMPVR 204
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN+L+S + + L + ++F E+ E +++ F
Sbjct: 205 DAVSWNSLLSAYLEKGLVDEARALFDEME---ERNVESWNF------------------- 242
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+I+ Y V+E ++F+ MP R++VSWN+++ ++ G
Sbjct: 243 ------------------MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCY 284
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E ++ KM+ + PD T+V+VL
Sbjct: 285 NEVLEVFNKMLD-DSTEKPDGFTLVSVL 311
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + G+ VH + F+ T L+ MYS CG + VF + R
Sbjct: 310 VLSACASLGSLSQGEWVHVYIDKHGIEIEGFLA-TALVDMYSKCGKIDKALEVFRATSKR 368
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
++ WN+++S + + L D L IF E+ + KP+ TF V+ AC +
Sbjct: 369 DVSTWNSIISDLSVHGLGKDALEIFSEMVYEG-FKPNGITFIGVLSACNHVG 419
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 99/172 (57%), Gaps = 2/172 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+I+ Y+ G ++R VFDS+ +++ WNA+V+ + Y +VL +F + D+ +P
Sbjct: 213 MISGYAAAGLVKEAREVFDSMPVKDVVSWNAMVTAYAHVGCYNEVLEVFNMMLDDSAERP 272
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D FT V+ AC + + G VH K G+ + FV+ AL+ MY KC +++ +++F
Sbjct: 273 DGFTLVNVLSACASLGSLSQGEWVHVYIDKHGIEIEGFVATALVDMYSKCGKIDKALEVF 332
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+R++ +WNSII G S +G ++ ++ +M+ EGF P+ IT + VL
Sbjct: 333 RDTSKRDVSTWNSIITGLSVHGLGKDALEIFSEMV--YEGFKPNGITFIGVL 382
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+ + + +++ N F N+++ + + L++F E+ + PD ++F V+KAC
Sbjct: 63 AHSILNRIESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGP-VFPDKYSFTFVLKACA 121
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
G +HG+ K L+ DVFV N LI +YG+ + E K+ + MP R+ VSWNS
Sbjct: 122 AFCGFEEGRQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNS 181
Query: 272 IICGFSENGFSCESFDLLIKM 292
++ + + G E+ L +M
Sbjct: 182 LLSAYLDKGLVEEARALFDEM 202
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 42/208 (20%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC E G+++H L S ++ F+ NT LI +Y G+ +R+V D + R
Sbjct: 116 VLKACAAFCGFEEGRQIHGLFMKSDLVTDVFVENT-LINVYGRSGYFEIARKVLDRMPVR 174
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN+L+S + L + ++F E+ E +++ F
Sbjct: 175 DAVSWNSLLSAYLDKGLVEEARALFDEME---ERNVESWNF------------------- 212
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+I+ Y V+E ++F+ MP +++VSWN+++ ++ G
Sbjct: 213 ------------------MISGYAAAGLVKEAREVFDSMPVKDVVSWNAMVTAYAHVGCY 254
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E ++ MM + PD T+V VL
Sbjct: 255 NEVLEVF-NMMLDDSAERPDGFTLVNVL 281
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + G+ VH + F+ T L+ MYS CG + VF R
Sbjct: 280 VLSACASLGSLSQGEWVHVYIDKHGIEIEGFVA-TALVDMYSKCGKIDKALEVFRDTSKR 338
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
++ WN++++G + + L D L IF E+ + KP+ TF V+ AC +
Sbjct: 339 DVSTWNSIITGLSVHGLGKDALEIFSEMVYEG-FKPNGITFIGVLSACNHVG 389
>gi|218195019|gb|EEC77446.1| hypothetical protein OsI_16252 [Oryza sativa Indica Group]
Length = 300
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSND--FIINTRLITMYSLCGFPLDSRRVFDS 158
G +L + + G+++H A+ +D + T+L+ MY CG D+ R+FD
Sbjct: 59 GWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDG 118
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK---PDNFTFPCVIKACGGIAD 215
+ R +F WNAL+ + + + ++ + + + PD T V+KACG D
Sbjct: 119 MPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGD 178
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE-RNLVSWNSIIC 274
GS VHG+A K GL V+NAL+ MY KC ++ +++FE M + R++ SWNS I
Sbjct: 179 GRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAIS 238
Query: 275 GFSENGF 281
G +NG
Sbjct: 239 GCVQNGI 245
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 219 GSGVHGMAAKMGLIGD---VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
G +H A G +GD F++ L+ MYGKC + + +LF+ MP R + SWN++I
Sbjct: 74 GRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGA 133
Query: 276 FSENGFSCESFDLLIKMMGCE--EGFIPDVITVVTVL 310
+G + E+ + M E G PD T+ +VL
Sbjct: 134 CLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVL 170
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT- 161
+L+ACG E D G VH L S + + N L+ MY+ CG + RVF+ ++
Sbjct: 169 VLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANA-LVGMYAKCGLLDSALRVFEWMRDG 227
Query: 162 RNLFQWNALVSGFTKNELY 180
R++ WN+ +SG +N ++
Sbjct: 228 RDVASWNSAISGCVQNGIF 246
>gi|302759362|ref|XP_002963104.1| hypothetical protein SELMODRAFT_78378 [Selaginella moellendorffii]
gi|300169965|gb|EFJ36567.1| hypothetical protein SELMODRAFT_78378 [Selaginella moellendorffii]
Length = 542
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 100/185 (54%), Gaps = 5/185 (2%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLK--TRNLFQWNALVSGFTKNELYTDVLSI 186
++ LI Y CG P D+RRVFDSL+ RN W ++++ +T NE + +
Sbjct: 70 LDKKLVVANTLIHTYGRCGSPSDARRVFDSLQRSARNAVSWASMIAAYTSNEQAKAGVEL 129
Query: 187 FVELSSDTELKP-DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
+ E+ E K D + CV++AC ++ + G VH G ++ ++ A++ MY
Sbjct: 130 YQEMIQREESKKMDPVAYLCVLEACSSLSALKVGRQVHKEIVAAGFGDELPLAGAIVNMY 189
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
KC + E ++F+ M RN+++WNS++ G++++G + L + C +G +PD IT
Sbjct: 190 CKCGSLVEAREVFDGMKARNMIAWNSMMGGYTQHGHPKRALQLF--ELACLDGVLPDEIT 247
Query: 306 VVTVL 310
VT+L
Sbjct: 248 FVTIL 252
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 48 SSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQAC 107
+S+ + +N + G+ QE+ EESK ++ L +L+AC
Sbjct: 111 ASMIAAYTSNEQAKAGVELYQEMIQR-EESKKMDPVAYL---------------CVLEAC 154
Query: 108 GHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQ 166
+++G++VH E+V+A F ++ + ++ MY CG +++R VFD +K RN+
Sbjct: 155 SSLSALKVGRQVHKEIVAAG--FGDELPLAGAIVNMYCKCGSLVEAREVFDGMKARNMIA 212
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVG---FGSG 221
WN+++ G+T++ L +F EL+ + PD TF ++ AC G+ G FGS
Sbjct: 213 WNSMMGGYTQHGHPKRALQLF-ELACLDGVLPDEITFVTILTACSHAGMVKPGVWHFGS- 270
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ A G+ V ++ M G+ +++ +L E MP
Sbjct: 271 ---IRADFGMEPSVDHYVCMVDMLGRAGWLDAAERLVERMP 308
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 113/207 (54%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ AC + + G++VH + + ++ + TRL+TMY CG D+R V D + R+
Sbjct: 49 ITACIERRALWEGRQVHARM-ITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS 107
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W ++SG+++ E + + L +F+++ + P+ +T V+ +C G + G VH
Sbjct: 108 VVSWTTMISGYSQTERHVEALDLFIKMLRAGCI-PNEYTLATVLTSCSGPQSIYQGKQVH 166
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ K +FV ++L+ MY K ++E ++F+ +PER++VS +II G+++ G
Sbjct: 167 SLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDE 226
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL ++ EG + +T T++
Sbjct: 227 EALDLFRQLY--SEGMQCNHVTFTTLV 251
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 114/210 (54%), Gaps = 5/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L +C + I GK+VH L+ T F + + + L+ MY+ ++RRVFD+L
Sbjct: 147 ATVLTSCSGPQSIYQGKQVHSLL-VKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 205
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ A++SG+ + L + L +F +L S+ ++ ++ TF ++ A G+A + +G
Sbjct: 206 ERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEG-MQCNHVTFTTLVTALSGLASLDYGK 264
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH + + L V + N+LI MY KC + ++F+ M ER++VSWN+++ G+ +G
Sbjct: 265 QVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHG 324
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E L + + PD +T++ VL
Sbjct: 325 LGHEVISLFKDL---HKEVKPDSVTLLAVL 351
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 17/169 (10%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
++ GK+VH L+ + + LI MYS CG L SRRVFD++ R++ WNA++
Sbjct: 260 LDYGKQVHALI-LRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLM 318
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVG---FGSGVHGMAA 227
G+ ++ L +V+S+F +L E+KPD+ T V+ C GG+ D G F + V +A
Sbjct: 319 GYGRHGLGHEVISLFKDLHK--EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSA 376
Query: 228 KM--GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
+ G G +I + G+ +E+ + L E MP E W S++
Sbjct: 377 LLHTGHYG------CIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLL 419
>gi|302769798|ref|XP_002968318.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
gi|300163962|gb|EFJ30572.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
Length = 666
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 108/214 (50%), Gaps = 8/214 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC +E G ++ LV +D ++ L+ MYS CG + VF+ +K R
Sbjct: 114 VVSACCDPSALEAGDKIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIR 173
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELS------SDTELKPDNFTFPCVIKACGGIADV 216
++ WNA++S +++ + F E+ + L PD FT + AC G +
Sbjct: 174 DVVSWNAIISALARHDRKDIAMQRFREMQLEGLSPKEEALLPDGFTLASALAACTGPEML 233
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G +H + + G ++ V NAL++MY C +++ ++ F+ M +RN+VSWN++I +
Sbjct: 234 EEGREIHALVIERGCESELVVGNALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAY 293
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+F + +M EG P+ +T VT L
Sbjct: 294 VHHNCDKEAFRIFHQMQ--LEGVQPNSVTFVTFL 325
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 13/216 (6%)
Query: 104 LQACGHEKDIEIGKRVHELVSAS---TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
L++C + + GK +H LV S TQ S + L+ MY CG +R VFD +
Sbjct: 13 LKSCVRIQSLAAGKFIHLLVIESGLLTQIS----VGNALVNMYGKCGSLALAREVFDGMD 68
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ WNA+++ + + + + +F + D ++PD+ TF V+ AC + + G
Sbjct: 69 HRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCDPSALEAGD 128
Query: 221 GVHGMAAKMGLI-GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+ + + GL+ DV + NAL+ MY KC ++ +FE M R++VSWN+II + +
Sbjct: 129 KIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDVVSWNAIISALARH 188
Query: 280 GFSCESFDLLIKMM-----GCEEGFIPDVITVVTVL 310
+ +M EE +PD T+ + L
Sbjct: 189 DRKDIAMQRFREMQLEGLSPKEEALLPDGFTLASAL 224
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 8/207 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + +E G+ +H LV ++ ++ L++MY+ CG D+ F + RN
Sbjct: 224 LAACTGPEMLEEGREIHALV-IERGCESELVVGNALVSMYANCGTLQDALECFQKMAQRN 282
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WNA+++ + + + IF ++ + ++P++ TF + AC A G +H
Sbjct: 283 VVSWNAMIAAYVHHNCDKEAFRIFHQMQLEG-VQPNSVTFVTFLSACSTPAAFEDGLQLH 341
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ + GL D V NA++ M+ KC +++ + F+ +P++NL SWN ++ + G
Sbjct: 342 SIVRESGLEADASVGNAVVHMFAKCWSLDDALAAFQRIPQKNLGSWNGLLGAYIHVGRLA 401
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M EE DVIT +L
Sbjct: 402 EARKLFEVM---EE---RDVITWNMIL 422
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 92/171 (53%), Gaps = 3/171 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+ Y G ++R++F+ ++ R++ WN ++ + + E+ + + +F + ++ K
Sbjct: 390 LLGAYIHVGRLAEARKLFEVMEERDVITWNMILGAYVEREMAKEAVRLFRRMIAEG-TKS 448
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
++ T+ ++ AC G A + G +H + + G ++FV NAL+ M+GKCA + + F
Sbjct: 449 NSITWTTMLGACAGEALLAEGRRIHELIGERGADSELFVGNALVDMFGKCASLGGARQAF 508
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
E + ++ SWN ++ ++NG + E+ ++M EG P +T + V
Sbjct: 509 ERIRGKDASSWNVLVAALAQNGDAEEALKQFLQMQ--REGIKPTDVTFIVV 557
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
L PDN +F +K+C I + G +H + + GL+ + V NAL+ MYGKC +
Sbjct: 2 LLPDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALAR 61
Query: 256 KLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI-PDVITVVTVL 310
++F+ M R+++SWN++I +++ G E+ +L M E+G I PD +T V V+
Sbjct: 62 EVFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQ--EDGRIEPDSVTFVAVV 115
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC E + G+R+HEL+ S F+ N L+ M+ C +R+ F+ ++ +
Sbjct: 456 MLGACAGEALLAEGRRIHELIGERGADSELFVGNA-LVDMFGKCASLGGARQAFERIRGK 514
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
+ WN LV+ +N + L F+++ + +KP + TF V AC
Sbjct: 515 DASSWNVLVAALAQNGDAEEALKQFLQMQREG-IKPTDVTFIVVFWAC 561
>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
Length = 923
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 108/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ ACG +E GK +H L++ S + + + L+TMY+ G D+R +FD++ TR
Sbjct: 455 VFNACGSSASLEKGKWIHSLLTES-ELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTR 513
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A+V ++ L + L IF + + + P+ TF V+ ACG +A + V
Sbjct: 514 NVISWTAMVGVHSQLGLNREALRIFRSILLEG-VAPNEVTFTAVLNACGNLASIPAAKLV 572
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
++ G G+V V+N L+ GKC +EE+ F+VM +N VSWN+ I +++G
Sbjct: 573 QACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNG 632
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+L M EG +T++ VL
Sbjct: 633 VRGVELFQTMQ--LEGIDTGSVTLIGVL 658
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 6/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACGH +++ + V A D I+ T ++ Y CG + VFD + R
Sbjct: 147 VLGACGHPWEVDT---IRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVR 203
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA++S +E + L +F ++ + P+ T + AC D +
Sbjct: 204 DAAVWNAMISLLVAHEQGDEALELFRQMRLGG-VTPNKGTCVAALNACCHSRDFSEALRI 262
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A ++ D V AL+ MYGK V++ ++FE + ER++VSWN+++ + NGF
Sbjct: 263 HAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFH 322
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F +M+ E +P IT V +L
Sbjct: 323 DKAFKCFREMLLVGE--LPSRITYVAIL 348
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 102/213 (47%), Gaps = 16/213 (7%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ C D+ G+R+H L+ + DF+ RL+ MY CG P ++R VF ++ +
Sbjct: 46 LIHKCARLHDLAQGRRIHGLILRNGIEVGDFL-GARLLAMYCKCGSPEEARAVFQGIQDK 104
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +L+ ++ + +F E+ + P++ T+ V+ ACG + V
Sbjct: 105 SVVAWTSLIGVNARSGHPKEAFHLFREMQLQG-VMPNDVTYVAVLGACGHPWE------V 157
Query: 223 HGMAAKMGLIG----DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
+ A++ G DV V+ A++ YGKC ++ +F+ + R+ WN++I
Sbjct: 158 DTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVA 217
Query: 279 NGFSCESFDLLIKM-MGCEEGFIPDVITVVTVL 310
+ E+ +L +M +G G P+ T V L
Sbjct: 218 HEQGDEALELFRQMRLG---GVTPNKGTCVAAL 247
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 91/185 (49%), Gaps = 7/185 (3%)
Query: 130 SNDFIINTRLITMYSLCGFP---LDSRRVFDSLKTR-NLFQWNALVSGFTKNELYTDVLS 185
S D ++ T ++ MYS C P S + + + + ++ WN ++S + +NE + + +
Sbjct: 376 SVDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFT 435
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
IF L + D + V ACG A + G +H + + L V NAL+ MY
Sbjct: 436 IF-RLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMY 494
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
+ +E+ ++F+ M RN++SW +++ S+ G + E+ + ++ EG P+ +T
Sbjct: 495 ARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSIL--LEGVAPNEVT 552
Query: 306 VVTVL 310
VL
Sbjct: 553 FTAVL 557
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 10/131 (7%)
Query: 181 TDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL-IGDVFVSN 239
TD L F + S+D TF +I C + D+ G +HG+ + G+ +GD F+
Sbjct: 27 TDELKYFDDGSADAS------TFAALIHKCARLHDLAQGRRIHGLILRNGIEVGD-FLGA 79
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
L+AMY KC EE +F+ + ++++V+W S+I + +G E+F L +M +G
Sbjct: 80 RLLAMYCKCGSPEEARAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQ--LQGV 137
Query: 300 IPDVITVVTVL 310
+P+ +T V VL
Sbjct: 138 MPNDVTYVAVL 148
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 109/199 (54%), Gaps = 4/199 (2%)
Query: 111 KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNAL 170
K + GK++H L+ S F II +L+T Y+ D+ + ++ + WN L
Sbjct: 107 KSLSQGKQLHTLI-ISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLL 165
Query: 171 VSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMG 230
+S + +N L+ + LS + +++ ++PD FT+P V+KACG D+ FG +H
Sbjct: 166 ISSYVRNGLHGEALSAYKQMTHKG-IRPDKFTYPSVLKACGEKLDIAFGKKLHASINASC 224
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLI 290
L ++FV N+L++MY K + LFE M ER+ VSWN++I G++ G E+F+L
Sbjct: 225 LGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFG 284
Query: 291 KMMGCEEGFIPDVITVVTV 309
KM EG ++IT T+
Sbjct: 285 KMR--VEGIELNIITWNTI 301
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 121/240 (50%), Gaps = 7/240 (2%)
Query: 74 CEESKSLNKALSLLQE-NLHNADLKE-ATGVLLQACGHEKDIEIGKRVHELVSASTQFSN 131
C +S + +AL LL + D+ AT + L AC H I++G+ +H S
Sbjct: 305 CVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGV 364
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + N LITMYS C + + +F S +T+N+ WN+++SG+T + + +F E+
Sbjct: 365 DNVKNA-LITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREML 423
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVH-GMAAKMGLIGDVFVSNALIAMYGKCAF 250
+ ++P+ T ++ C +A++ G H + + G + + N+L+ MY +
Sbjct: 424 L-SGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGK 482
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
V E +LF+ + R+ V++ S+I G+ G E+ L +M + PD +T+V VL
Sbjct: 483 VLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMK--KRHIKPDHVTMVAVL 540
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 114/243 (46%), Gaps = 37/243 (15%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG + DI GK++H ++AS N F+ N+ L++MY+ G +R +F+++ R
Sbjct: 200 VLKACGEKLDIAFGKKLHASINASCLGWNLFVHNS-LVSMYAKTGELSTARCLFENMLER 258
Query: 163 NLFQWNALVSGFTKNELYTDVLSIF-------------------------------VELS 191
+ WN ++SG+ ++ + +F +EL
Sbjct: 259 DDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSGNFEEALELL 318
Query: 192 SDTE---LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
S + D+ + AC I + G +HG A + G V NALI MY +C
Sbjct: 319 SHMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSRC 378
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
++ LF+ +N+++WNS++ G++ S E+ L +M+ G P+ +T+ +
Sbjct: 379 KYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREML--LSGIEPNYVTIAS 436
Query: 309 VLP 311
+LP
Sbjct: 437 ILP 439
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 77/163 (47%), Gaps = 2/163 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C +++ GK H + F + ++ L+ MY+ G L+++R+FDS+ R
Sbjct: 437 ILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSISRR 496
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ + +L++G+ + L +F E+ +KPD+ T V+ AC V G +
Sbjct: 497 DEVTYTSLIAGYGIQGEGREALKLFDEMKK-RHIKPDHVTMVAVLSACSHSGLVTEGIKL 555
Query: 223 HG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
M + G+I + ++ ++G+ + + ++ MP R
Sbjct: 556 FELMPSAYGIIPRLEHFACMVDLFGRAGLLHKAKEMITRMPYR 598
>gi|224080943|ref|XP_002306238.1| predicted protein [Populus trichocarpa]
gi|222855687|gb|EEE93234.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 4/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+LL+ C + I K+++ + S SN + T L+ YS GF L++R+VFD +
Sbjct: 11 ILLRHCANHSLIYQAKQINAQIVLSNYLSN-VTLQTDLLLAYSKSGFLLEARKVFDRMPE 69
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
RN+ WN ++S + +N Y+D + IF E +PD++T P + KA G+ D G
Sbjct: 70 RNMHSWNIMMSSYAQNYCYSDAICIFDEFLK-MGFRPDHYTLPPLFKAVAGVGDCYLGFV 128
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG ++G G V V ++++ Y K + E ++F M R+ WN +I GF GF
Sbjct: 129 LHGWVIRLGFEGYVVVGSSVLDFYLKGGKLVEAKRVFSNMLWRDCGVWNLMISGFGRAGF 188
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L+ M+ EE D + V ++L
Sbjct: 189 YVEALSLVRNMVEEEEKL--DALVVPSIL 215
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 5/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L +A D +G +H V F ++ + ++ Y G ++++RVF ++ R
Sbjct: 113 LFKAVAGVGDCYLGFVLHGWV-IRLGFEGYVVVGSSVLDFYLKGGKLVEAKRVFSNMLWR 171
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN ++SGF + Y + LS+ + + E K D P ++ ACGG D+ G +
Sbjct: 172 DCGVWNLMISGFGRAGFYVEALSLVRNMVEEEE-KLDALVVPSILNACGGEGDLMKGKEI 230
Query: 223 HGMAAKMGLIG-DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
HG K L DV +SN+LI MY +C + + K+F M N+V+W ++I + +G
Sbjct: 231 HGRVVKSTLFNVDVVISNSLIDMYARCGCLNDSEKVFRNMRSLNVVTWTTMISCYGVHGR 290
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ES ++ KM G G P+ +T+ VL
Sbjct: 291 AEESLEVFKKMKGF--GLKPNPVTLTAVL 317
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 99/198 (50%), Gaps = 5/198 (2%)
Query: 82 KALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
+ALSL++ + + +A V +L ACG E D+ GK +H V ST F+ D +I+ L
Sbjct: 191 EALSLVRNMVEEEEKLDALVVPSILNACGGEGDLMKGKEIHGRVVKSTLFNVDVVISNSL 250
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
I MY+ CG DS +VF ++++ N+ W ++S + + + L +F ++ LKP+
Sbjct: 251 IDMYARCGCLNDSEKVFRNMRSLNVVTWTTMISCYGVHGRAEESLEVFKKMKG-FGLKPN 309
Query: 200 NFTFPCVIKACGGIADVGFGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
T V+ +C + G + + M + G V ++ + G+ ++EE + L
Sbjct: 310 PVTLTAVLASCSHSGLIDEGRRIFYSMQSHYGFEPSVEHYACMVDLLGRFGYLEEALGLV 369
Query: 259 EVMP-ERNLVSWNSIICG 275
+ M E W +++ G
Sbjct: 370 QRMKLEATASVWGALLGG 387
>gi|15217470|ref|NP_177298.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169716|sp|Q9C9H9.1|PP114_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71420
gi|12323734|gb|AAG51830.1|AC016163_19 hypothetical protein; 56014-58251 [Arabidopsis thaliana]
gi|332197078|gb|AEE35199.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 745
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 124/238 (52%), Gaps = 11/238 (4%)
Query: 66 FLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHE-LVS 124
F++ + TL S + +A+SL ++A L QAC ++++ G +H ++S
Sbjct: 29 FVEGLRTLVR-SGDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLS 87
Query: 125 ASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVL 184
+S + I+ LI MY+ CG L +R+VFD++ RN+ W AL++G+ + +
Sbjct: 88 HPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGF 147
Query: 185 SIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAM 244
+F + S P+ FT V+ +C G VHG+A K+GL ++V+NA+I+M
Sbjct: 148 CLFSSMLS--HCFPNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISM 201
Query: 245 YGKC---AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
YG+C A E +FE + +NLV+WNS+I F ++ + ++M GF
Sbjct: 202 YGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGF 259
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 135 INTRLITMYS-LCGFPLDSRRVFDSL-KTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
+ T LI +YS + D ++F + R++ WN +++ F + + +F +L
Sbjct: 304 VATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDP-ERAIHLFGQLRQ 362
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ +L PD +TF V+KAC G+ +H K G + D ++N+LI Y KC ++
Sbjct: 363 E-KLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLD 421
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENG 280
+++F+ M R++VSWNS++ +S +G
Sbjct: 422 LCMRVFDDMDSRDVVSWNSMLKAYSLHG 449
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC---GFPLDSRRVFDSL 159
+L +C +E GK+VH L + ++ N +I+MY C ++ VF+++
Sbjct: 167 VLTSCRYEP----GKQVHGLALKLGLHCSIYVANA-VISMYGRCHDGAAAYEAWTVFEAI 221
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
K +NL WN++++ F L + +F+ + SD + D T + + +D+
Sbjct: 222 KFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDG-VGFDRATLLNICSSLYKSSDLVPN 280
Query: 220 S------GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE----RNLVSW 269
+H + K GL+ V+ ALI +Y + +E+ +++ E R++V+W
Sbjct: 281 EVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSE--MLEDYTDCYKLFMEMSHCRDIVAW 338
Query: 270 NSIICGFS 277
N II F+
Sbjct: 339 NGIITAFA 346
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
+V ++N LI MY KC + ++F+ MPERN+VSW ++I G+ + G E F L M+
Sbjct: 95 NVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML 154
Query: 294 GCEEGFIPDVITVVTVL 310
P+ T+ +VL
Sbjct: 155 S---HCFPNEFTLSSVL 168
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F D ++N LI Y+ CG RVFD + +R++ WN+++ ++ + +L +F
Sbjct: 400 FLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQ 459
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
++ ++ PD+ TF ++ AC V G
Sbjct: 460 KM----DINPDSATFIALLSACSHAGRVEEG 486
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 114/211 (54%), Gaps = 6/211 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ +AC + + +G +H VS S SN F+ N +++MY CG + +FD L R
Sbjct: 265 VFKACANLSSLSLGASLHATVSRSGFASNVFVCNA-VVSMYGKCGALRHAHNMFDDLCHR 323
Query: 163 ---NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+L WN++VS + L++F ++++ + PD + ++ AC +A G
Sbjct: 324 GIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRG 383
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
VHG + + GL+ DVFV NA++ MY KC +EE K+F+ M +++VSWN+++ G+S+
Sbjct: 384 RQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQA 443
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + L +M EE DV+T V+
Sbjct: 444 GRLEHALSLFERMT--EENIELDVVTWTAVI 472
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 98/186 (52%), Gaps = 8/186 (4%)
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSL--KTRNLFQWNALVSGFTKNELYTDVLSIF 187
++D + LI MY+ C +R++FDS+ K R++ W ++ G+ ++ + L +F
Sbjct: 540 ADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLF 599
Query: 188 VEL-SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV--FVSNALIAM 244
+ D +KP++FT C + AC +A + FG VH + G V FV+N LI M
Sbjct: 600 SGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLR-NFYGSVMLFVANCLIDM 658
Query: 245 YGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVI 304
Y K V+ +F+ MP+RN VSW S++ G+ +G ++ + +M +PD I
Sbjct: 659 YSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVP--LVPDGI 716
Query: 305 TVVTVL 310
T + VL
Sbjct: 717 TFLVVL 722
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 5/152 (3%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++F WN L+ DV +++ ++ S PD++TFP V KAC ++ + G+ +
Sbjct: 223 SVFWWNQLIRRALHLGSPRDVFTLYRQMKS-LGWTPDHYTFPFVFKACANLSSLSLGASL 281
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER---NLVSWNSIICGFSEN 279
H ++ G +VFV NA+++MYGKC + +F+ + R +LVSWNS++ +
Sbjct: 282 HATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWA 341
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ + L KM PDVI++V +LP
Sbjct: 342 SDANTALALFHKMT-TRHLMSPDVISLVNILP 372
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 5/173 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + G++VH V + S + LI MYS G ++ VFD++ RN
Sbjct: 620 LVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRN 679
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGSG 221
W +L++G+ + D L +F E+ L PD TF V+ AC G+ D G +
Sbjct: 680 AVSWTSLMTGYGMHGRGEDALRVFDEMRK-VPLVPDGITFLVVLYACSHSGMVDHGI-NF 737
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
+ M+ G+ ++ ++G+ + E +KL MP E V W +++
Sbjct: 738 FNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALL 790
>gi|255571517|ref|XP_002526706.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534006|gb|EEF35728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 461
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 114/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC D ++G +H LV F + +NT L+++Y+ CG D+ ++ D +
Sbjct: 120 VIKACARLLDFQLGIMMHTLV-VKLGFDCNLFVNTSLVSLYAKCGSIDDALKMLDLIPES 178
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A++SG+ Y + + +F + +T L+PD+FT V+ AC I D+ G +
Sbjct: 179 NIVSWTAIISGYIGVGKYREAIDLFRRML-ETGLRPDSFTIVQVLSACIQIGDLANGEWI 237
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ + +VFV+ +L+ +Y K +E+ LF+ M ER++VSW+++I G++ NG
Sbjct: 238 DRYITENVMARNVFVTTSLVDLYAKHGNMEKARCLFDGMAERDIVSWSAMIQGYASNGLP 297
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ DL KM+ G PD +V L
Sbjct: 298 KDALDLFFKML--NAGLKPDHYAMVGFL 323
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 95/159 (59%), Gaps = 3/159 (1%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+R +F+ +K ++ +N ++ G ++ +T+ + + + L P+NFTFP VIKAC
Sbjct: 67 TRLIFNQIKEPDVVLYNTMIRGLVSSDCFTESIEFYYSMRKKGFL-PNNFTFPFVIKACA 125
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
+ D G +H + K+G ++FV+ +L+++Y KC +++ +K+ +++PE N+VSW +
Sbjct: 126 RLLDFQLGIMMHTLVVKLGFDCNLFVNTSLVSLYAKCGSIDDALKMLDLIPESNIVSWTA 185
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
II G+ G E+ DL +M+ E G PD T+V VL
Sbjct: 186 IISGYIGVGKYREAIDLFRRML--ETGLRPDSFTIVQVL 222
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC D+ G+ + ++ + N F+ T L+ +Y+ G +R +FD + R
Sbjct: 221 VLSACIQIGDLANGEWIDRYITENVMARNVFV-TTSLVDLYAKHGNMEKARCLFDGMAER 279
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+A++ G+ N L D L +F ++ + LKPD++ + AC + + G
Sbjct: 280 DIVSWSAMIQGYASNGLPKDALDLFFKML-NAGLKPDHYAMVGFLCACARLGALELGDWG 338
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ + + + ALI MY KC + + ++F+ + ++ WN+ I G + NG
Sbjct: 339 SNLMDRTEFFTNHVLGTALIDMYAKCGSMAKAWEVFKGIKGKDRAVWNAAISGLAMNGHE 398
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F L +M G PD T V +L
Sbjct: 399 KAAFGLFGQME--RFGIQPDGNTFVGLL 424
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 4/214 (1%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
+ G +L A + + G VH SN ++ + LI MY+ C +++VF
Sbjct: 349 RSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYV-GSSLINMYAKCEKMEAAKKVF 407
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
D+L RNL WNA++ G+ +N + V+ +F E+ PD FT+ ++ AC + +
Sbjct: 408 DALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRG-CGFWPDEFTYTSILSACACLECL 466
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G +H K ++FV N L+ MY KC +EE + FE + R+ VSWN+II G+
Sbjct: 467 EMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGY 526
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+F++ +M+ +G PD +++ ++L
Sbjct: 527 VQEEDEDEAFNMFRRMI--LDGIAPDEVSLASIL 558
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + +E+G+++H + N F+ NT L+ MY+ CG ++R+ F+ ++ R
Sbjct: 456 ILSACACLECLEMGRQLHSFIIKHNFEYNLFVENT-LVDMYAKCGALEEARQQFEFIRNR 514
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA++ G+ + E + ++F + D + PD + ++ C + + G V
Sbjct: 515 DNVSWNAIIVGYVQEEDEDEAFNMFRRMILDG-IAPDEVSLASILSGCANLQALEQGEQV 573
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K GL ++ ++LI MY KC +E +F MP R++VS N+II G+++N
Sbjct: 574 HCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDL- 632
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL +M EG P IT ++L
Sbjct: 633 VEAIDLFQEMQ--NEGLNPSEITFASLL 658
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 120/236 (50%), Gaps = 9/236 (3%)
Query: 80 LNKALSLLQENLHNADLKEAT---GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
L +A+ L QE + N L + LL AC + +G+++H L+ + +
Sbjct: 632 LVEAIDLFQE-MQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLG 690
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKT-RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
L+ MY D+ +F + ++ W A++SG T+N + L ++ E+ +
Sbjct: 691 VSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNA 750
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
+PD TF V++AC +A +G G +H + +GL D +A++ MY KC ++ V
Sbjct: 751 -RPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSV 809
Query: 256 KLFEVMPERN-LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++FE M +N ++SWNS+I GF++NG++ + + +M PD +T + VL
Sbjct: 810 QVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTR--IRPDDVTFLGVL 863
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 86/160 (53%), Gaps = 3/160 (1%)
Query: 151 DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
D+ +F + N+ WN ++SG K + + F + T +K T V+ A
Sbjct: 301 DACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWK-TGVKSTRSTLGSVLSAI 359
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
+ + +G VH A K GL +V+V ++LI MY KC +E K+F+ + ERNLV WN
Sbjct: 360 ASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWN 419
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+++ G+++NG++ + L +M GC GF PD T ++L
Sbjct: 420 AMLGGYAQNGYASKVMKLFSEMRGC--GFWPDEFTYTSIL 457
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 3/176 (1%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ + ++ +Y+ CG + + F+ L+ R++ WN+++S +++ V+ F L +
Sbjct: 118 LGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQ-NC 176
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+ P+ FT+ V+ +C + D+ G VH KMG + F +LI MY KC + +
Sbjct: 177 GVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDA 236
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
K+F+ + + + VSW ++I G+ + G E+ + M + G +PD + VTV+
Sbjct: 237 RKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQ--KLGLVPDQVAFVTVI 290
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 39/193 (20%)
Query: 101 GVLLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
++L +C DI++GK+VH ++ +F N F + LI MYS CG +D+R++FD++
Sbjct: 186 AIVLSSCARLVDIDLGKQVHCGVIKMGFEF-NSFCEGS-LIDMYSKCGSLVDARKIFDAV 243
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+ W A+++G+ + L + L +F ++ L PD F VI AC VG G
Sbjct: 244 VDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQK-LGLVPDQVAFVTVITAC-----VGLG 297
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+++ LF MP N+V+WN +I G +
Sbjct: 298 R------------------------------LDDACDLFVQMPNTNVVAWNVMISGHVKR 327
Query: 280 GFSCESFDLLIKM 292
G E+ D M
Sbjct: 328 GCDIEAIDFFKNM 340
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 99/197 (50%), Gaps = 7/197 (3%)
Query: 82 KALSLLQE-NLHNADLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
+AL L QE + +NA +AT +L+AC + G+ +H L+ +D + + +
Sbjct: 737 EALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLI-FHVGLDSDELTGSAV 795
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRN-LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+ MY+ CG S +VF+ + ++N + WN+++ GF KN + L IF E+ T ++P
Sbjct: 796 VDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKH-TRIRP 854
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
D+ TF V+ AC V G + M ++ + +I + G+ F++E +
Sbjct: 855 DDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEF 914
Query: 258 FEVMP-ERNLVSWNSII 273
+ + E N + W +++
Sbjct: 915 IDKLNFEPNAMIWATLL 931
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H K G + +A++ +Y KC VE K F + +R++++WNS++ +S G
Sbjct: 103 IHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQG- 161
Query: 282 SCESFDLLIKMMGCEE--GFIPDVITVVTVL 310
S + +I G + G P+ T VL
Sbjct: 162 ---SLEQVIWCFGSLQNCGVSPNQFTYAIVL 189
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 113/207 (54%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ AC + + G++VH + + ++ + TRL+TMY CG D+R V D + R+
Sbjct: 17 ITACIERRALWEGRQVHARM-ITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS 75
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W ++SG+++ E + + L +F+++ + P+ +T V+ +C G + G VH
Sbjct: 76 VVSWTTMISGYSQTERHVEALDLFIKMLRAGCI-PNEYTLATVLTSCSGPQSIYQGKQVH 134
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ K +FV ++L+ MY K ++E ++F+ +PER++VS +II G+++ G
Sbjct: 135 SLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDE 194
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL ++ EG + +T T++
Sbjct: 195 EALDLFRQLYS--EGMQCNHVTFTTLV 219
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 114/210 (54%), Gaps = 5/210 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L +C + I GK+VH L+ T F + + + L+ MY+ ++RRVFD+L
Sbjct: 115 ATVLTSCSGPQSIYQGKQVHSLL-VKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 173
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ A++SG+ + L + L +F +L S+ ++ ++ TF ++ A G+A + +G
Sbjct: 174 ERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEG-MQCNHVTFTTLVTALSGLASLDYGK 232
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH + + L V + N+LI MY KC + ++F+ M ER++VSWN+++ G+ +G
Sbjct: 233 QVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHG 292
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E L + + PD +T++ VL
Sbjct: 293 LGHEVISLFKDL---HKEVKPDSVTLLAVL 319
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 17/169 (10%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
++ GK+VH L+ + + LI MYS CG L SRRVFD++ R++ WNA++
Sbjct: 228 LDYGKQVHALI-LRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLM 286
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVG---FGSGVHGMAA 227
G+ ++ L +V+S+F +L E+KPD+ T V+ C GG+ D G F + V +A
Sbjct: 287 GYGRHGLGHEVISLFKDLHK--EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSA 344
Query: 228 KM--GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
+ G G +I + G+ +E+ + L E MP E W S++
Sbjct: 345 LLHTGHYG------CIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLL 387
>gi|297735590|emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 103/189 (54%), Gaps = 15/189 (7%)
Query: 136 NTRLITMYSLCGFPLD----SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ L+ M C F +R +F +K N+F WN ++ G N+ + D + + +
Sbjct: 45 DNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMR 104
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK---------MGLIGDVFVSNALI 242
S+ L P+NFTFP V+KAC + D+ G +H + K MG++ +VFV +L+
Sbjct: 105 SEGFL-PNNFTFPFVLKACARLLDLQLGVKIHTLVVKEWIHKCIMEMGMVRNVFVGTSLV 163
Query: 243 AMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEE-GFIP 301
MY KC +E+ +F+ MPE+++VSW ++I G++ NG E+ DL ++M + G P
Sbjct: 164 DMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENKLGIKP 223
Query: 302 DVITVVTVL 310
D T + +L
Sbjct: 224 DGNTFIGLL 232
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 87/184 (47%), Gaps = 14/184 (7%)
Query: 103 LLQACGHEKDIEIGKRVHELVSAS--------TQFSNDFIINTRLITMYSLCGFPLDSRR 154
+L+AC D+++G ++H LV + + T L+ MY+ CG +R
Sbjct: 118 VLKACARLLDLQLGVKIHTLVVKEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARS 177
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL--KPDNFTFPCVIKAC-- 210
VFD + +++ W A++ G+ N L + + +F+++ + +L KPD TF ++ C
Sbjct: 178 VFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENKLGIKPDGNTFIGLLCGCTH 237
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSW 269
G+ D G + M L + ++ + G+ ++E +L MP E N + W
Sbjct: 238 AGLVDEG-RRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVW 296
Query: 270 NSII 273
+++
Sbjct: 297 GALL 300
>gi|302826322|ref|XP_002994659.1| hypothetical protein SELMODRAFT_138963 [Selaginella moellendorffii]
gi|300137212|gb|EFJ04275.1| hypothetical protein SELMODRAFT_138963 [Selaginella moellendorffii]
Length = 288
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 99/178 (55%), Gaps = 5/178 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFS-NDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L AC H D+E G+R+HE + S +D +I L+TMY+ CG + +R F+ ++ +
Sbjct: 113 LAACTHLGDLEHGRRIHERIHHSKIAGVHDVVIGNALVTMYARCGDLVSAREFFEGMREK 172
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WNA++S + + + L +F ++ K ++F F AC + ++ G +
Sbjct: 173 NSMSWNAIISAYVQGGHPREALELFARMTG----KLNSFVFASAFTACSMVGEIDLGKKL 228
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+ + GL D+ V NAL++MY KC ++E ++F +P R++ +W ++ G++++G
Sbjct: 229 YARFVESGLKPDLIVQNALMSMYAKCGELDEARRIFFELPTRDVGAWACLMAGYAQHG 286
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 4/192 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
D+ GK +H + S +D ++ L+ MY CG D+R+VFD+L N+F W L+
Sbjct: 18 DLLEGKVLHFQIERSPH-CHDRLVANFLVQMYGRCGSLEDARKVFDTLSNPNVFSWTMLI 76
Query: 172 SGFTKNELYTDVLSIFVELS-SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM--AAK 228
+ +N SIF + D ++P+ F + AC + D+ G +H +K
Sbjct: 77 KAYAQNGHLEGARSIFDAMPIRDLRIQPNRSIFASALAACTHLGDLEHGRRIHERIHHSK 136
Query: 229 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
+ + DV + NAL+ MY +C + + FE M E+N +SWN+II + + G E+ +L
Sbjct: 137 IAGVHDVVIGNALVTMYARCGDLVSAREFFEGMREKNSMSWNAIISAYVQGGHPREALEL 196
Query: 289 LIKMMGCEEGFI 300
+M G F+
Sbjct: 197 FARMTGKLNSFV 208
>gi|302766239|ref|XP_002966540.1| hypothetical protein SELMODRAFT_61257 [Selaginella moellendorffii]
gi|300165960|gb|EFJ32567.1| hypothetical protein SELMODRAFT_61257 [Selaginella moellendorffii]
Length = 630
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC KD+ +G +H + S + T L+ MY+ CG +R VFD + ++
Sbjct: 107 LAACSGAKDLALGMAIHARI-LSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQIPHKD 165
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W A+++ F + L E ++P+ TF I AC + G +H
Sbjct: 166 VVSWTAMITAFAQMGDCRQALETL-EGMIQARVQPNPVTFVAAITACSSREFLDRGRKIH 224
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+GL GD+ + NAL++MY K + EE + +F+ M +RN VSWNS+I F+ + SC
Sbjct: 225 AAVIDLGLHGDITIQNALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSC 284
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L M EG PD ++ + VL
Sbjct: 285 AAMGLFHGMN--LEGIKPDDVSFLGVL 309
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 106/211 (50%), Gaps = 9/211 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFP---LDSRRVFDSL 159
LL+ CG + + G+RVH+ + A+ F + LI MY CG D+R VFD +
Sbjct: 4 LLRRCGISRSLADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVFDQM 63
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+++ W+ +++ + + + +++F + +++P+ + AC G D+ G
Sbjct: 64 PKKDVVSWSCIIAAYGQAGHCREAINLFQRM----DVEPNEMVIVSTLAACSGAKDLALG 119
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H L VFV AL+ MY KC +E+ +F+ +P +++VSW ++I F++
Sbjct: 120 MAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQIPHKDVVSWTAMITAFAQM 179
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G ++ + L M+ + P+ +T V +
Sbjct: 180 GDCRQALETLEGMI--QARVQPNPVTFVAAI 208
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 111/214 (51%), Gaps = 9/214 (4%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L AC + + KR+H +L A+ D + L+T Y+ CG + R+F +
Sbjct: 308 VLSACSSTRCLRSCKRIHSQLELAAVHSPPDLSVENSLVTAYAKCGDLEAAERIFQRIPG 367
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N+ W A+++ +T + + L ++ ++ + ++PD+ VI A + DVG
Sbjct: 368 KNVVSWTAMLTAYTFHGNGSKALELYDKMVGQS-IQPDSVVLLNVIYAGSLVGDVGLARK 426
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS-----WNSIICGF 276
+H A + + + NALI MY +C +EE ++F+ + +NLV+ W+S++ G+
Sbjct: 427 LHARVASSSFMLKIQIQNALINMYTRCGSLEEARRVFDGIERKNLVARDTVTWSSLVAGY 486
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +G + E LL + M EG PD +T V++L
Sbjct: 487 AHHGHA-EYAILLYRDMHL-EGVQPDSVTYVSIL 518
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 105/209 (50%), Gaps = 6/209 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ AC + ++ G+++H V D I L++MY+ ++ VF ++ RN
Sbjct: 208 ITACSSREFLDRGRKIHAAV-IDLGLHGDITIQNALVSMYAKGSSAEEALSVFQRMEDRN 266
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WN++++ F + + +F ++ + +KPD+ +F V+ AC + +H
Sbjct: 267 RVSWNSMIAAFAASAQSCAAMGLFHGMNLEG-IKPDDVSFLGVLSACSSTRCLRSCKRIH 325
Query: 224 GMA--AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
A + D+ V N+L+ Y KC +E ++F+ +P +N+VSW +++ ++ +G
Sbjct: 326 SQLELAAVHSPPDLSVENSLVTAYAKCGDLEAAERIFQRIPGKNVVSWTAMLTAYTFHGN 385
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L KM+G + PD + ++ V+
Sbjct: 386 GSKALELYDKMVG--QSIQPDSVVLLNVI 412
>gi|255565583|ref|XP_002523781.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536869|gb|EEF38507.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 661
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 108/196 (55%), Gaps = 5/196 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G ++H +V + + F+ N+ LI MYS G +++ VFD++ TR+ WN++V+G+
Sbjct: 217 GVQIHTMVIKNGFEATIFVCNS-LINMYSKSGMVKNAKAVFDNMVTRDAISWNSMVAGYV 275
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
N LY + + +F L +K NF F VIK+C I ++GF +HG K G D
Sbjct: 276 ANGLYLEAIEMFYHLRL-AGVKLTNFIFSSVIKSCANIKELGFARQLHGQVLKGGFEYDH 334
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPE-RNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
+ AL+ Y K +++ K+F +M RN+VSW +II G +NG + ++ +L +M
Sbjct: 335 NIRTALMVAYNKGREIDDAFKIFSMMYGIRNVVSWTAIISGHLQNGLAEQAVNLFCEM-- 392
Query: 295 CEEGFIPDVITVVTVL 310
EG P+ T T+L
Sbjct: 393 SREGVRPNDYTFSTIL 408
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 10/208 (4%)
Query: 91 LHNADLKEATGVL---LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCG 147
+H +DL L L+AC + G +VH+ S F D + T L+ MY
Sbjct: 87 IHRSDLLTDGSTLSCVLKACACLSCKKFGIQVHDYCVKSG-FLEDISVGTSLVDMYMKSE 145
Query: 148 FPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVI 207
+ + +RVFD ++ RN+ W +L+ G+ N L + L F E+ + +KP+ FTF V+
Sbjct: 146 YVEEGKRVFDEMEERNVVSWTSLLVGYAHNGLNMEALECFFEMQAGA-IKPNPFTFATVL 204
Query: 208 KACG---GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
A IAD G +H M K G +FV N+LI MY K V+ +F+ M R
Sbjct: 205 GALADSKAIADKGVQ--IHTMVIKNGFEATIFVCNSLINMYSKSGMVKNAKAVFDNMVTR 262
Query: 265 NLVSWNSIICGFSENGFSCESFDLLIKM 292
+ +SWNS++ G+ NG E+ ++ +
Sbjct: 263 DAISWNSMVAGYVANGLYLEAIEMFYHL 290
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 93/160 (58%), Gaps = 5/160 (3%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
++ VFD +++ Q N L+ +++N + +V+++FV + ++L D T CV+KAC
Sbjct: 49 AQNVFDRSPKQDVVQCNHLLFDYSRNNSHHEVVNLFVAIHR-SDLLTDGSTLSCVLKACA 107
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
++ FG VH K G + D+ V +L+ MY K +VEE ++F+ M ERN+VSW S
Sbjct: 108 CLSCKKFGIQVHDYCVKSGFLEDISVGTSLVDMYMKSEYVEEGKRVFDEMEERNVVSWTS 167
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFI-PDVITVVTVL 310
++ G++ NG + E+ + +M + G I P+ T TVL
Sbjct: 168 LLVGYAHNGLNMEALECFFEM---QAGAIKPNPFTFATVL 204
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 94/177 (53%), Gaps = 4/177 (2%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ T L+ Y G ++ +VF+ + +++ W+A+V+G+ + + I ++++
Sbjct: 434 VGTALLDAYVKLGNLNEASKVFERIDDKDIVAWSAMVAGYAQTGDTEGAVKILIQMAKKG 493
Query: 195 ELKPDNFTFPCVIKACGG-IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
++P+ +TF VI AC A V G H + K + VS+AL+ MY K +E
Sbjct: 494 -VEPNEYTFSSVINACTAPTAAVEQGKQFHAWSIKSRFNDALCVSSALVTMYAKRGEIES 552
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F R+LVSWNS++ G++++G + ++ ++ +M ++ D +T + V+
Sbjct: 553 ANEVFRRQGVRDLVSWNSMVSGYAQHGHARKALEVFKEMQ--DQNLELDGVTFIGVI 607
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 109/209 (52%), Gaps = 9/209 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL-KT 161
++++C + K++ +++H V F D I T L+ Y+ D+ ++F +
Sbjct: 305 VIKSCANIKELGFARQLHGQVLKGG-FEYDHNIRTALMVAYNKGREIDDAFKIFSMMYGI 363
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
RN+ W A++SG +N L +++F E+S + ++P+++TF ++ A ++
Sbjct: 364 RNVVSWTAIISGHLQNGLAEQAVNLFCEMSREG-VRPNDYTFSTILAAQPVVSPFE---- 418
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH K V AL+ Y K + E K+FE + ++++V+W++++ G+++ G
Sbjct: 419 VHAQVIKSDYEKSPSVGTALLDAYVKLGNLNEASKVFERIDDKDIVAWSAMVAGYAQTGD 478
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + +LI+M ++G P+ T +V+
Sbjct: 479 TEGAVKILIQM--AKKGVEPNEYTFSSVI 505
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E GK+ H S ++F++ +++ L+TMY+ G + VF R+L WN++VS
Sbjct: 515 VEQGKQFHAW-SIKSRFNDALCVSSALVTMYAKRGEIESANEVFRRQGVRDLVSWNSMVS 573
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIAD 215
G+ ++ L +F E+ D L+ D TF VI AC G+ D
Sbjct: 574 GYAQHGHARKALEVFKEM-QDQNLELDGVTFIGVISACTHAGLVD 617
>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g13270, chloroplastic; Flags: Precursor
gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 752
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 3/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V+L+AC +++ +GK++H V A ++ + T L+ Y C + R F ++
Sbjct: 290 VVLKACASLEELNLGKQIHACV-AKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIRE 348
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
N W+A++SG+ + + + + F L S ++FT+ + +AC +AD G
Sbjct: 349 PNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQ 408
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH A K LIG + +ALI MY KC +++ ++FE M ++V+W + I G + G
Sbjct: 409 VHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGN 468
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ L KM+ C G P+ +T + VL
Sbjct: 469 ASEALRLFEKMVSC--GMKPNSVTFIAVL 495
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 110/205 (53%), Gaps = 4/205 (1%)
Query: 76 ESKSLNKALSLLQENLHNADLKEAT--GVLLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
E L+KA+ L L + D ++ LL++ + + ++ G+++H V + SN
Sbjct: 161 EQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNT- 219
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
I T ++ MY CG+ + ++RVFD + + L+ G+T+ D L +FV+L ++
Sbjct: 220 SIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTE 279
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
++ D+F F V+KAC + ++ G +H AK+GL +V V L+ Y KC+ E
Sbjct: 280 G-VEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFES 338
Query: 254 MVKLFEVMPERNLVSWNSIICGFSE 278
+ F+ + E N VSW++II G+ +
Sbjct: 339 ACRAFQEIREPNDVSWSAIISGYCQ 363
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 4/175 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ QAC D IG +VH + + + + LITMYS CG D+ VF+S+
Sbjct: 393 IFQACSVLADCNIGGQVHADAIKRSLIGSQYG-ESALITMYSKCGCLDDANEVFESMDNP 451
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG- 221
++ W A +SG ++ L +F ++ S +KP++ TF V+ AC V G
Sbjct: 452 DIVAWTAFISGHAYYGNASEALRLFEKMVS-CGMKPNSVTFIAVLTACSHAGLVEQGKHC 510
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICG 275
+ M K + + + +I +Y + ++E +K + MP E + +SW + G
Sbjct: 511 LDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSG 565
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 107/236 (45%), Gaps = 8/236 (3%)
Query: 78 KSLNKALSLLQENLHNADLKEAT---GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFI 134
+ LN+A LQE + A + ++ L +AC + + G+ +H+ + + + +
Sbjct: 62 RKLNEAFEFLQE-MDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLL 120
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
N ++ MY C D+ ++FD + N ++S + + + + +F + +
Sbjct: 121 QNC-VLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASG 179
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+ KP + + ++K+ + FG +H + GL + + ++ MY KC ++
Sbjct: 180 D-KPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGA 238
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F+ M + V+ ++ G+++ G + ++ L + ++ EG D VL
Sbjct: 239 KRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLV--TEGVEWDSFVFSVVL 292
>gi|125535994|gb|EAY82482.1| hypothetical protein OsI_37700 [Oryza sativa Indica Group]
Length = 584
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 98/182 (53%), Gaps = 3/182 (1%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F +D + T L+ +YS CG +R++FD+++ R++ WNA++SG+ +N L + ++
Sbjct: 140 FGSDRFVQTALVVLYSKCGQLPVARKLFDAIRDRSVVAWNAMISGYEQNGLAERAIEVYR 199
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
E+ ++ PD+ TF + AC + G V + VF+ +AL+ MY +C
Sbjct: 200 EMQV-AQVVPDSATFVTTLSACAQAGALDLGREVERRIVSDQMDVSVFLGSALVNMYARC 258
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
V + F+ + ERN+V+W S+I G+ +G CE+ L M EG P+ +T V
Sbjct: 259 GLVSKARDWFDRLQERNVVTWTSMIAGYGMHGHGCEAIKLFHLMR--LEGPTPNDVTFVA 316
Query: 309 VL 310
VL
Sbjct: 317 VL 318
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G VH + +G D FV AL+ +Y KC + KLF+ + +R++V+WN++I G+ +
Sbjct: 128 GMAVHAHSVLLGFGSDRFVQTALVVLYSKCGQLPVARKLFDAIRDRSVVAWNAMISGYEQ 187
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
NG + + ++ +M + +PD T VT L
Sbjct: 188 NGLAERAIEVYREMQVAQ--VVPDSATFVTTL 217
>gi|357136551|ref|XP_003569867.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Brachypodium distachyon]
Length = 580
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 4/206 (1%)
Query: 105 QACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNL 164
+AC + G VH S F +D + T L+ +YS CG +R++FD+++ +N+
Sbjct: 113 KACADLSALRTGMTVHAH-SILLGFGSDRFVLTALVVLYSKCGRLPVARKLFDAIRDKNV 171
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
WNA++SG+ +N L + ++ E+ + PD+ TF + AC + G V
Sbjct: 172 VAWNAMISGYEQNGLAEQGIEVYKEMKVAKAV-PDSMTFVATLSACAQAGALDLGREVER 230
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCE 284
+ VF+ +AL+ MY +C V++ + F+V+ ERN+V+W S+I G+ +G E
Sbjct: 231 RIVSERMDISVFLGSALVNMYARCGVVDKARQWFDVLQERNVVTWTSMIAGYGMHGHGHE 290
Query: 285 SFDLLIKMMGCEEGFIPDVITVVTVL 310
+ L +M C +G P+ +T V VL
Sbjct: 291 AIKLY-HLMRC-KGPPPNDVTFVAVL 314
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
F +++L T L L+ + L S L +F F V KAC ++ + G VH
Sbjct: 71 FLFSSLARAATHQGLPLAALAFYRCLLS-AALPFSSFAFTAVAKACADLSALRTGMTVHA 129
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCE 284
+ +G D FV AL+ +Y KC + KLF+ + ++N+V+WN++I G+ +NG + +
Sbjct: 130 HSILLGFGSDRFVLTALVVLYSKCGRLPVARKLFDAIRDKNVVAWNAMISGYEQNGLAEQ 189
Query: 285 SFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +M + +PD +T V L
Sbjct: 190 GIEVYKEMKVAKA--VPDSMTFVATL 213
>gi|347954544|gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
Length = 526
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 125/239 (52%), Gaps = 8/239 (3%)
Query: 76 ESKSLNKALSLLQENLH-NADLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
E+ + +AL L ++ + N E+T V ++ AC IE+G++VH + SN
Sbjct: 197 ETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLK 256
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
I+N LI +YS CG + +F+ L +++ WN L+ G+T LY + L +F E+
Sbjct: 257 IVNA-LIDLYSKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 315
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM--GLIGDVFVSNALIAMYGKCAFV 251
E P++ T ++ AC + + G +H K G+ + +LI MY KC +
Sbjct: 316 GE-SPNDVTMLSILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDI 374
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E ++F+ M R+L SWN++I GF+ +G + +FDL KM + G PD IT V +L
Sbjct: 375 EAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMR--KNGIDPDDITFVGLL 431
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 98/180 (54%), Gaps = 3/180 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + T LI Y+ G+ +++++FD + +++ WNA++SG+ + Y + L +F ++
Sbjct: 153 DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM 212
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
T ++PD T V+ AC + G VH G ++ + NALI +Y KC V
Sbjct: 213 K-TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEV 271
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E LFE + ++++SWN++I G++ E+ L +M+ G P+ +T++++LP
Sbjct: 272 ETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEML--RSGESPNDVTMLSILP 329
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 34/187 (18%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
VF++++ NL WN + G + L ++V + S L P+ +TFP ++K+C
Sbjct: 44 VFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMIS-LGLLPNCYTFPFLLKSCAKSK 102
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAM------------------------------ 244
G +HG K+G D++V +LI+M
Sbjct: 103 AFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIK 162
Query: 245 -YGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDV 303
Y ++E KLF+ +P +++VSWN++I G++E G E+ +L MM + PD
Sbjct: 163 GYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM--KTNVRPDE 220
Query: 304 ITVVTVL 310
T+VTV+
Sbjct: 221 STMVTVV 227
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 120/272 (44%), Gaps = 68/272 (25%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
LQAC D+ GK++H + + N F+ N + MY+ CG +R +FD + +N
Sbjct: 162 LQACSQLLDLRHGKQIHGRIVVADLGENTFVRNA-MTDMYAKCGDIDKARLLFDGMIDKN 220
Query: 164 LFQWNALVSGFTK-----------NEL------------------------YTDVLSIFV 188
+ WN ++SG+ K NE+ D ++F+
Sbjct: 221 VVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFI 280
Query: 189 ELSSDTEL------------------------------KPDNFTFPCVIKACGGIADVGF 218
+L E+ KPD++T ++ +C +A +
Sbjct: 281 KLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYH 340
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G VHG MG+ + VS+AL+ MY KC + +FE MP RN+++WN++I G+++
Sbjct: 341 GQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQ 400
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
NG E+ L +M +E F PD IT V VL
Sbjct: 401 NGQVLEALTLYERMQ--QENFKPDNITFVGVL 430
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 38/265 (14%)
Query: 78 KSLNKALSLLQENLHN-ADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
+ L++A+ LL H A + T ++L C D KR+ + + D I+
Sbjct: 5 QKLHQAIDLLYS--HGLASFDDYTRLVLH-CARANDFIQAKRLQSHMELNLFQPKDSFIH 61
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNEL------------YTD-- 182
+L+ +Y+ G D++ VFD++ R+++ WN L+S + K + Y D
Sbjct: 62 NQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSV 121
Query: 183 -----------------VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
L + V + D +P ++ ++AC + D+ G +HG
Sbjct: 122 SYNTLIACFASNGHSGKALKVLVRMQEDG-FQPTQYSHVNALQACSQLLDLRHGKQIHGR 180
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
L + FV NA+ MY KC +++ LF+ M ++N+VSWN +I G+ + G E
Sbjct: 181 IVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNEC 240
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
L +M G PD++TV VL
Sbjct: 241 IHLFNEMQ--LSGLKPDLVTVSNVL 263
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 86/172 (50%), Gaps = 3/172 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ +C + G+ VH V N ++++ L+ MY CG LD+R +F+++ R
Sbjct: 328 MVSSCAKLASLYHGQVVHGKVVV-MGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIR 386
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WNA++ G+ +N + L+++ + + KPDN TF V+ AC V G
Sbjct: 387 NVITWNAMILGYAQNGQVLEALTLYERMQQEN-FKPDNITFVGVLSACINADMVKEGQKY 445
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
++ G+ + +I + G+ V++ V L + MP E N W++++
Sbjct: 446 FDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLL 497
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 99/184 (53%), Gaps = 5/184 (2%)
Query: 130 SNDFIINTRLITMYSLCGFPLDSRR---VFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
+ D + + LI Y+ G+ D+R+ VFD L +R+ WNA+++ + +N + I
Sbjct: 371 NRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKI 430
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
F E++ LKPD TF V++AC + + +H ++ L +V V+N LI MY
Sbjct: 431 FREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYA 490
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
+C +EE +LF E+ +VSW +++ FS+ G E+ DL +M EG PD +T
Sbjct: 491 RCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMD--LEGVKPDDVTY 548
Query: 307 VTVL 310
++L
Sbjct: 549 TSIL 552
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 91/166 (54%), Gaps = 2/166 (1%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+++H + A+ F D ++ T LI MY CG ++R VFD +K R++ WN ++ +
Sbjct: 226 GRKIHAEIVANG-FDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYV 284
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
N + + L ++ +L + K TF ++ AC + + G VH + GL +V
Sbjct: 285 LNGDFHEALELYQKLDMEG-FKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEV 343
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
V+ AL+ MY KC +EE K+F M R+ V+W+++I ++ NG+
Sbjct: 344 AVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGY 389
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 103/195 (52%), Gaps = 5/195 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+ +H V S S + N L+TMY+ G D++R+F SL+TR+ WNA++ +
Sbjct: 126 GREIHNRVFYSGLDSFQSLANA-LVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHS 184
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
++ ++ L IF E+ D +KP++ T+ VI + G +H G D+
Sbjct: 185 QSGDWSGALRIFKEMKCD--VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDL 242
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
V+ ALI MYGKC E ++F+ M +R++VSWN +I + NG E+ +L K+
Sbjct: 243 VVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLD-- 300
Query: 296 EEGFIPDVITVVTVL 310
EGF T V++L
Sbjct: 301 MEGFKRTKATFVSIL 315
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 109/210 (51%), Gaps = 10/210 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL--K 160
+L +C D+ G+ +HE + S +F D ++ LI+MY C +D+R VF+S+ +
Sbjct: 13 VLCSCSSCGDVVEGRALHERIRCS-RFERDTMVGNALISMYGKCDSLVDARSVFESMDWR 71
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
RN+ WNA+++ + +N T+ L ++ ++ L D+ TF V+ AC +A G
Sbjct: 72 QRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQG-LGTDHVTFVSVLGACSSLAQ---GR 127
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H GL ++NAL+ MY + V + ++F+ + R+ SWN++I S++G
Sbjct: 128 EIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSG 187
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + K M C+ P+ T + V+
Sbjct: 188 DWSGALRIF-KEMKCD--VKPNSTTYINVI 214
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+ +PDN TF V+ +C DV G +H D V NALI+MYGKC + +
Sbjct: 2 DRQPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDA 61
Query: 255 VKLFEVMP--ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+FE M +RN+VSWN++I +++NG S E+ L +M +G D +T V+VL
Sbjct: 62 RSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMN--LQGLGTDHVTFVSVL 117
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 18/181 (9%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+AC + K +H +S S SN + NT LI MY+ CG ++ R+F + K
Sbjct: 449 AVLEACASLGRLSEVKALHAQISESELESNVVVTNT-LINMYARCGSLEEAERLFAAAKE 507
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE-LKPDNFTFPCVIKAC--GGIADVGF 218
+ + W A+V+ F++ Y + L +F E+ D E +KPD+ T+ ++ C GG + G+
Sbjct: 508 KTVVSWTAMVAAFSQYGRYAEALDLFQEM--DLEGVKPDDVTYTSILFVCTHGGSLEQGW 565
Query: 219 G-----SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSI 272
+ +H +A D F A++ + G+ + + +L E MP E + V+W +
Sbjct: 566 RYFTDMAELHALAP----TADHFA--AMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTF 619
Query: 273 I 273
+
Sbjct: 620 L 620
>gi|302820182|ref|XP_002991759.1| hypothetical protein SELMODRAFT_134189 [Selaginella moellendorffii]
gi|300140440|gb|EFJ07163.1| hypothetical protein SELMODRAFT_134189 [Selaginella moellendorffii]
Length = 565
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 114/214 (53%), Gaps = 10/214 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCG---FPLDSRRVFDSL 159
+L AC +D+E G VH+ +++++ + +I T ++ MY CG ++R +F+ L
Sbjct: 178 VLGACADMEDLEQGSLVHQEITSTSD--GNTLIATAVVNMYGKCGQNGLLDEARDMFEQL 235
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
R L WNA+++ + +N+ LS+ + S+ KPD T + AC + + G
Sbjct: 236 PERTLVSWNAMLTAYAQNKHGRQALSLLAAMDSEGVTKPDRVTLITALNACADVGALAQG 295
Query: 220 SGVH-GMAAKMGL--IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
+H + +M DV V+ AL+ MYG+C VE+ +LFE MP ++VSW +I+ +
Sbjct: 296 KELHQAVDEEMSYKHRADVSVATALLNMYGRCGSVEQARRLFEAMPRHDIVSWTAIVSAY 355
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + S +L M EG +P+ I+ V+++
Sbjct: 356 ARCRQAKVSLELFRAME--LEGMLPNEISFVSIV 387
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
+F D ++ T L+ MY C ++ VF + +++ WN ++S F +N D ++F
Sbjct: 3 RFLPDTVVATALVRMYGRCHRVAEAESVFRDIANKSIVSWNVMLSAFARNGCVEDASALF 62
Query: 188 VEL-SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
+ D N A GG ++V V +M L DV L+++
Sbjct: 63 HAIPDGDKNTVSWNALLSAYNYAQGG-SNVANAWKVF---EEMPL-RDVVSWTTLVSVCA 117
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
+ VEE V LF+ MP+R+ VSWNSI+ G S+NG ++ + M+ EG D +
Sbjct: 118 RNGSVEEAVALFDKMPQRSRVSWNSIVSGLSQNGRGRKALQVFKVMV--LEGVEADSVCF 175
Query: 307 VTVL 310
+VL
Sbjct: 176 ASVL 179
>gi|115469032|ref|NP_001058115.1| Os06g0625800 [Oryza sativa Japonica Group]
gi|51535726|dbj|BAD37743.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113596155|dbj|BAF20029.1| Os06g0625800 [Oryza sativa Japonica Group]
Length = 433
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 114/210 (54%), Gaps = 4/210 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+LLQ C + +D +GKR+H + S F I T+L+ Y G +R+VFD +
Sbjct: 40 LLLQECVNRRDARMGKRIHARM-VSVGFGGGVYIVTKLLIFYVKIGELGVARKVFDGMPQ 98
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ WNA++SG + + +F + ++ ++PD FTF V+ AC +A + G
Sbjct: 99 RSVVAWNAMISGCARGGAEARAVEMFGSMRAEG-MRPDQFTFASVLCACARLAALEHGRR 157
Query: 222 VHGMAAKMGLIG-DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VHG+ K + G +VFV +AL+ MY KC+ EE + F P RN+ W ++I G ++G
Sbjct: 158 VHGVMVKSRVGGGNVFVDSALVDMYLKCSSPEEARRAFAAAPARNVTMWTAVISGHGQHG 217
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ L +M +G P+ +T + VL
Sbjct: 218 RAAEALALFDRMTRV-DGLRPNDVTFLAVL 246
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 5/182 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E G+RVH ++ S + +++ L+ MY C P ++RR F + R
Sbjct: 142 VLCACARLAALEHGRRVHGVMVKSRVGGGNVFVDSALVDMYLKCSSPEEARRAFAAAPAR 201
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG-SG 221
N+ W A++SG ++ + L++F ++ L+P++ TF V+ AC VG G
Sbjct: 202 NVTMWTAVISGHGQHGRAAEALALFDRMTRVDGLRPNDVTFLAVLSACAHAGLVGEGLRH 261
Query: 222 VHGMAAKMGLI--GDVFVSNA-LIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
+ M++ GL G+ + + ++A G+ E+VK E ++V W +++ +
Sbjct: 262 LSSMSSGYGLTPRGEHYAAAVDMLARVGRLGDAYELVKNLPDCQEHSVV-WGALLGAGRK 320
Query: 279 NG 280
+G
Sbjct: 321 HG 322
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
P T+ +++ C D G +H +G G V++ L+ Y K + K+
Sbjct: 33 PGEGTYALLLQECVNRRDARMGKRIHARMVSVGFGGGVYIVTKLLIFYVKIGELGVARKV 92
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ MP+R++V+WN++I G + G + ++ M EG PD T +VL
Sbjct: 93 FDGMPQRSVVAWNAMISGCARGGAEARAVEMFGSMR--AEGMRPDQFTFASVL 143
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 8/209 (3%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+AC + D+ +GK++H L+ A + D L++MY+ G + +FD + ++
Sbjct: 342 LRACANLSDLCLGKQLHALL-AKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKD 400
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
++ALVSG+ +N + +F ++ + ++PD T +I AC +A + G H
Sbjct: 401 TVSYSALVSGYVQNGKADEAFRVFRKMQA-CNVQPDVATMVSLIPACSHLAALQHGKCGH 459
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G G+ + + NALI MY KC ++ ++F+VMP R++VSWN++I G+ +G
Sbjct: 460 GSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGK 519
Query: 284 ESFDLLIKM--MGCEEGFIPDVITVVTVL 310
E+ L + M CE PD +T + ++
Sbjct: 520 EATALFLDMKHQACE----PDDVTFICLI 544
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 88/167 (52%), Gaps = 4/167 (2%)
Query: 145 LCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFP 204
+CG +R +FD + + +NAL+ ++ + +P+N+TFP
Sbjct: 75 ICGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLP-QPNNYTFP 133
Query: 205 CVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
V+KAC + D+ VH AA+ GL D+FVS AL+ +Y KCA +F MP R
Sbjct: 134 FVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPAR 193
Query: 265 NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++V+WN+++ G++ +G ++ L+ M ++ P+ T+V +LP
Sbjct: 194 DVVAWNAMLAGYALHGKYSDTIACLLLM---QDDHAPNASTLVALLP 237
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 7/196 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC D+ + VH +A D ++T L+ +Y+ C + VF + R
Sbjct: 135 VLKACSALLDLRSARAVH-CHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPAR 193
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA+++G+ + Y+D ++ + + D P+ T ++ + G V
Sbjct: 194 DVVAWNAMLAGYALHGKYSDTIACLLLMQDDHA--PNASTLVALLPLLAQHGALSQGRAV 251
Query: 223 HGMAAKMGLIGD----VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
H + + + D V V AL+ MY KC + ++FE M RN V+W++++ GF
Sbjct: 252 HAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVL 311
Query: 279 NGFSCESFDLLIKMMG 294
G E+F L M+
Sbjct: 312 CGRMLEAFSLFKDMLA 327
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 96/198 (48%), Gaps = 6/198 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ AC H ++ GK H V S I N LI MY+ CG SR++FD + R
Sbjct: 442 LIPACSHLAALQHGKCGHGSVIVRGIASETSICNA-LIDMYAKCGRIDLSRQIFDVMPAR 500
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG- 221
++ WN +++G+ + L + ++F+++ +PD+ TF C+I AC V G
Sbjct: 501 DIVSWNTMIAGYGIHGLGKEATALFLDMKHQA-CEPDDVTFICLISACSHSGLVTEGKRW 559
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII--CGFSE 278
H MA K G+ + ++ + + F++E + + MP + ++ W +++ C +
Sbjct: 560 FHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHK 619
Query: 279 NGFSCESFDLLIKMMGCE 296
N + +I+ +G E
Sbjct: 620 NIDLGKQVSSMIQQLGPE 637
>gi|125533803|gb|EAY80351.1| hypothetical protein OsI_35522 [Oryza sativa Indica Group]
Length = 470
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 104/189 (55%), Gaps = 6/189 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C + G++ H D + T L+ MY CG +RRVFD ++
Sbjct: 12 LLRRCAVAGAVRPGEQAHARAVVGGWLP-DATLETDLVLMYCRCGERRRARRVFDGMRAP 70
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ +N L++ D + +F L + + L+PD ++ P V++AC + D G +
Sbjct: 71 SMHAYNVLLAASPPR----DAMEVFSRLLA-SGLRPDGYSVPAVVRACSELPDAVLGGVI 125
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A ++GL+G+V V+ AL+ MY K F+++ V++F+ M ER+ V WN ++ G++ G +
Sbjct: 126 HGFAVRLGLMGNVVVAAALLDMYAKAGFLDDAVRVFDEMTERDAVVWNCMVAGYARAGRA 185
Query: 283 CESFDLLIK 291
E+F++ +
Sbjct: 186 VETFEIFSR 194
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 13/214 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC D +G +H + + ++ L+ MY+ GF D+ RVFD + R
Sbjct: 109 VVRACSELPDAVLGGVIHGF-AVRLGLMGNVVVAAALLDMYAKAGFLDDAVRVFDEMTER 167
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF-----TFPCVIKACGGIADVG 217
+ WN +V+G+ + + IF S +++ N P V+ C ++
Sbjct: 168 DAVVWNCMVAGYARAGRAVETFEIF----SRAQVEAVNMVNGLQAVPSVLNICAKEGELM 223
Query: 218 FGSGVHG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G +HG M + D+ V NALI MY KC V +F M +R++VSW+++I +
Sbjct: 224 KGREIHGRMVRCLAFDSDIAVGNALINMYAKCGRVNVSQAVFSGMQQRDVVSWSTMIHSY 283
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S +G ++ + ++M+ EG P+ IT +VL
Sbjct: 284 SIHGKGEQALKVYMEML--SEGVKPNWITFTSVL 315
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 5/186 (2%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
+A +L C E ++ G+ +H + F +D + LI MY+ CG S+ VF
Sbjct: 207 QAVPSVLNICAKEGELMKGREIHGRMVRCLAFDSDIAVGNALINMYAKCGRVNVSQAVFS 266
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
++ R++ W+ ++ ++ + L +++E+ S+ +KP+ TF V+ +C V
Sbjct: 267 GMQQRDVVSWSTMIHSYSIHGKGEQALKVYMEMLSEG-VKPNWITFTSVLSSCSHSGLVT 325
Query: 218 FGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS-WNSII-- 273
G + M G+ ++ + G+ +EE V L MP S W +++
Sbjct: 326 EGRKIFESMTKVHGVHPAAEHYACMVDLLGRAGAIEEAVGLIRKMPMEPCASVWGALLSA 385
Query: 274 CGFSEN 279
C N
Sbjct: 386 CAMHNN 391
>gi|449435366|ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 112/214 (52%), Gaps = 13/214 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+AC + + G++ H + D + LI +Y+ CG + +VF+ + R
Sbjct: 132 LLKACAYVFALSEGRQAHAQI-FKLGLDLDVYVGNSLIHLYASCGCLSMALKVFEKMPLR 190
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN ++ + ++ L+ + L +FVE+ + E PD +T ++ AC GI + G
Sbjct: 191 SLVSWNVMIDAYVQSGLFENALKLFVEMQNSFE--PDGYTMQSIVSACAGIGALSLGMWA 248
Query: 223 HGMA---AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
H A + GDV ++++L+ MY KC + ++FE MP+ +L SWNS+I + +
Sbjct: 249 HAYVLRKASGAMAGDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNSMILALAMH 308
Query: 280 G---FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + + F L++M E F+P+ +T V VL
Sbjct: 309 GRGQAALQCFSRLVEM----EKFLPNSVTFVGVL 338
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 106/201 (52%), Gaps = 6/201 (2%)
Query: 112 DIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNAL 170
D+ K++H + + + ++ + +R++ + SL F + RVF+ + N F WN L
Sbjct: 37 DLSKLKQIHAQAIRNFSTHNSSLFLYSRILHVSSLIDFDY-ACRVFNQIDNPNSFMWNTL 95
Query: 171 VSGFTKN-ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM 229
+ ++ + + IF + + ++PD TFP ++KAC + + G H K+
Sbjct: 96 IGACARSLDRKEQAIEIFYRMLEEGSVEPDKHTFPFLLKACAYVFALSEGRQAHAQIFKL 155
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL 289
GL DV+V N+LI +Y C + +K+FE MP R+LVSWN +I + ++G + L
Sbjct: 156 GLDLDVYVGNSLIHLYASCGCLSMALKVFEKMPLRSLVSWNVMIDAYVQSGLFENALKLF 215
Query: 290 IKMMGCEEGFIPDVITVVTVL 310
++M + F PD T+ +++
Sbjct: 216 VEM---QNSFEPDGYTMQSIV 233
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 103 LLQACGHEKDIEIGKRVHELV--SASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
++ AC + +G H V AS + D +IN+ L+ MYS CG +++VF+++
Sbjct: 232 IVSACAGIGALSLGMWAHAYVLRKASGAMAGDVLINSSLVDMYSKCGSLRMAQQVFETMP 291
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+L WN+++ + L F L + P++ TF V+ AC V G
Sbjct: 292 KHDLNSWNSMILALAMHGRGQAALQCFSRLVEMEKFLPNSVTFVGVLSACNHGGMVADGR 351
Query: 221 GVHGMAAKMGLIGDVFVS------NALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSII 273
M ++ D + L+ + + F++E ++L M + + V W S++
Sbjct: 352 KYFDM-----MVNDYKIEPRLEHYGCLVDLLSRSGFIDEALELVANMHIKPDAVIWRSLL 406
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 3/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V+L+AC +++ GK++H V A + + T L+ Y C + R F ++
Sbjct: 288 VVLKACASLEELRFGKQIHACV-AKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIRE 346
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
N W+A++SG+ + + + + F L S + ++FT+ + +AC +AD G
Sbjct: 347 PNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQ 406
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH A K LIG + +ALI MY KC +++ ++FE M ++V+W + I G + G
Sbjct: 407 VHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGN 466
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ L KM+ C G P+ +T + VL
Sbjct: 467 ASEALRLFEKMVSC--GMKPNSVTFIAVL 493
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 113/205 (55%), Gaps = 4/205 (1%)
Query: 76 ESKSLNKALSLLQENLHNADLKEAT--GVLLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
E L+KA+ L L + D ++ LL++ + + ++IG+++H V + SN
Sbjct: 159 EQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNA- 217
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
I T ++ MY CG+ + ++RVFD + + W L+ G+T+ D L +FV+L ++
Sbjct: 218 SIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITE 277
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
++ D+F F V+KAC + ++ FG +H AK+GL +V V L+ Y KC+ E
Sbjct: 278 G-VEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFES 336
Query: 254 MVKLFEVMPERNLVSWNSIICGFSE 278
+ F+ + E N VSW++II G+ +
Sbjct: 337 ACRAFQEIREPNDVSWSAIISGYCQ 361
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 4/175 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ QAC D IG +VH + + + + LITMYS CG D+ VF+S+
Sbjct: 391 IFQACSVLADCNIGGQVHADAIKRSLIGSQYG-ESALITMYSKCGCLDDAHEVFESMDNP 449
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG- 221
++ W A +SG ++ L +F ++ S +KP++ TF V+ AC V G
Sbjct: 450 DIVAWTAFISGHAYYGNASEALRLFEKMVS-CGMKPNSVTFIAVLTACSHAGLVEQGKHY 508
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICG 275
+ M K + + + +I +Y + ++E ++ + MP E + +SW + G
Sbjct: 509 LDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSG 563
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 120/275 (43%), Gaps = 15/275 (5%)
Query: 39 SLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLK- 97
S S+ SS+ +S K + LH + +L + K LN+A QE + A +
Sbjct: 28 SWVSLKSSTSSVKISHK--QGQVENLH----LVSLSKHGK-LNEAFEFFQE-MDKAGVSV 79
Query: 98 --EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV 155
+ L +AC + + G+ +H + + + + N ++ MY CG D+ ++
Sbjct: 80 SLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVLLQNC-VLQMYCECGSLEDADKL 138
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
FD + N ++S + + L + +F + + KP + + ++K+
Sbjct: 139 FDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGD-KPPSSMYTTLLKSLVNPRA 197
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
+ G +H + GL + + ++ MY KC ++ ++F+ M + V+W ++ G
Sbjct: 198 LDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVG 257
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+++ G + ++ L + ++ EG D VL
Sbjct: 258 YTQAGRARDALKLFVDLI--TEGVEWDSFVFSVVL 290
>gi|255564603|ref|XP_002523296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537384|gb|EEF39012.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 353
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 99/174 (56%), Gaps = 4/174 (2%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI YS CG + ++F + RN+ W A++SG+++N Y L +F+++ + L+P
Sbjct: 154 LIAGYSRCGDMEGALKIFKLMPDRNVVSWTAMISGYSQNGRYAKALELFLKMEKENGLRP 213
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ T ++ AC + + G + A + GL+ +++VSNAL+ MY +C ++ K+F
Sbjct: 214 NEVTIASILPACANLGALEVGDRIETYARENGLLRNLYVSNALLEMYARCGKIDMARKVF 273
Query: 259 E--VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + RNL SWNS+I G + +G S ++ L +M+ EG PD +T V +L
Sbjct: 274 DKIIGKRRNLCSWNSMIMGLAIHGRSHDALHLYNRML--IEGIAPDDVTFVGIL 325
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 97/192 (50%), Gaps = 35/192 (18%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFT-KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
+ ++ D + + N+F +N L+ ++ +N+L+ SI+ ++ S + TF + AC
Sbjct: 35 AHKLIDLIPSPNVFLYNKLIQAYSFQNQLH-QCFSIYSQMRS-RNCTGNQHTFTFLFAAC 92
Query: 211 GGI-------------ADVGFGSGVHGMAA------KMGLIG------------DVFVSN 239
GF S V + A K+G++ D+ N
Sbjct: 93 ASFFSPLHAQMLHTHFKKSGFESDVIALTALVDMYCKLGMVAFAHRVFDEIPVRDIPTWN 152
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
ALIA Y +C +E +K+F++MP+RN+VSW ++I G+S+NG ++ +L +KM E G
Sbjct: 153 ALIAGYSRCGDMEGALKIFKLMPDRNVVSWTAMISGYSQNGRYAKALELFLKMEK-ENGL 211
Query: 300 IPDVITVVTVLP 311
P+ +T+ ++LP
Sbjct: 212 RPNEVTIASILP 223
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL--K 160
+L AC + +E+G R+ + N ++ N L+ MY+ CG +R+VFD + K
Sbjct: 221 ILPACANLGALEVGDRIETYARENGLLRNLYVSNA-LLEMYARCGKIDMARKVFDKIIGK 279
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGI 213
RNL WN+++ G + D L ++ + + + PD+ TF ++ AC GG+
Sbjct: 280 RRNLCSWNSMIMGLAIHGRSHDALHLYNRMLIEG-IAPDDVTFVGILLACTHGGM 333
>gi|222635914|gb|EEE66046.1| hypothetical protein OsJ_22034 [Oryza sativa Japonica Group]
Length = 425
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 114/210 (54%), Gaps = 4/210 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+LLQ C + +D +GKR+H + S F I T+L+ Y G +R+VFD +
Sbjct: 32 LLLQECVNRRDARMGKRIHARM-VSVGFGGGVYIVTKLLIFYVKIGELGVARKVFDGMPQ 90
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ WNA++SG + + +F + ++ ++PD FTF V+ AC +A + G
Sbjct: 91 RSVVAWNAMISGCARGGAEARAVEMFGSMRAEG-MRPDQFTFASVLCACARLAALEHGRR 149
Query: 222 VHGMAAKMGLIG-DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VHG+ K + G +VFV +AL+ MY KC+ EE + F P RN+ W ++I G ++G
Sbjct: 150 VHGVMVKSRVGGGNVFVDSALVDMYLKCSSPEEARRAFAAAPARNVTMWTAVISGHGQHG 209
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ L +M +G P+ +T + VL
Sbjct: 210 RAAEALALFDRMTRV-DGLRPNDVTFLAVL 238
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 5/182 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E G+RVH ++ S + +++ L+ MY C P ++RR F + R
Sbjct: 134 VLCACARLAALEHGRRVHGVMVKSRVGGGNVFVDSALVDMYLKCSSPEEARRAFAAAPAR 193
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG-SG 221
N+ W A++SG ++ + L++F ++ L+P++ TF V+ AC VG G
Sbjct: 194 NVTMWTAVISGHGQHGRAAEALALFDRMTRVDGLRPNDVTFLAVLSACAHAGLVGEGLRH 253
Query: 222 VHGMAAKMGLI--GDVFVSNA-LIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
+ M++ GL G+ + + ++A G+ E+VK E ++V W +++ +
Sbjct: 254 LSSMSSGYGLTPRGEHYAAAVDMLARVGRLGDAYELVKNLPDCQEHSVV-WGALLGAGRK 312
Query: 279 NG 280
+G
Sbjct: 313 HG 314
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
P T+ +++ C D G +H +G G V++ L+ Y K + K+
Sbjct: 25 PGEGTYALLLQECVNRRDARMGKRIHARMVSVGFGGGVYIVTKLLIFYVKIGELGVARKV 84
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ MP+R++V+WN++I G + G + ++ M EG PD T +VL
Sbjct: 85 FDGMPQRSVVAWNAMISGCARGGAEARAVEMFGSMR--AEGMRPDQFTFASVL 135
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 111/216 (51%), Gaps = 11/216 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG G H L+ + SN FI N L+ MYS CG ++ +FD + R
Sbjct: 161 VLKACGELPSYRCGSAFHGLICCNGFESNVFICNA-LVAMYSRCGSLEEASMIFDEITQR 219
Query: 163 ---NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDN-----FTFPCVIKACGGIA 214
++ WN++VS K+ L +F +++ KP N + ++ ACG +
Sbjct: 220 GIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLK 279
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
V VHG A + G DVFV NALI Y KC +E VK+F +M +++VSWN+++
Sbjct: 280 AVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVA 339
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G+S++G +F+L M +E DV+T V+
Sbjct: 340 GYSQSGNFEAAFELFKNMR--KENIPLDVVTWTAVI 373
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 119/246 (48%), Gaps = 18/246 (7%)
Query: 81 NKALSLLQENLHNADLKEATGVL--LQACGHEKDIEIGKRVHE------LVSASTQFSN- 131
++AL+L ++ + + L ++ L AC G +H L++ F
Sbjct: 383 HEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGE 442
Query: 132 --DFIINTRLITMYSLCGFPLDSRRVFDS--LKTRNLFQWNALVSGFTKNELYTDVLSIF 187
D ++ LI MYS C +R +FD L+ RN+ W ++ G + D L +F
Sbjct: 443 DEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLF 502
Query: 188 VELSSDTE-LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI--GDVFVSNALIAM 244
VE+ S+ + P+ +T C++ AC +A + G +H + FV+N LI M
Sbjct: 503 VEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDM 562
Query: 245 YGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVI 304
Y KC V+ +F+ M +++ +SW S++ G+ +G E+ D+ KM + GF+PD I
Sbjct: 563 YSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMR--KAGFVPDDI 620
Query: 305 TVVTVL 310
T + VL
Sbjct: 621 TFLVVL 626
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 8/184 (4%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ T ++ Y CG + V + + WN L+ K +++ +
Sbjct: 91 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR-A 149
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+PD+FT P V+KACG + GS HG+ G +VF+ NAL+AMY +C +EE
Sbjct: 150 GTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 209
Query: 255 VKLFEVMPER---NLVSWNSIICGFSENGFSCESFDLLIKM-MGCEEGFI---PDVITVV 307
+F+ + +R +++SWNSI+ ++ + + DL KM + E D+I++V
Sbjct: 210 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 269
Query: 308 TVLP 311
+LP
Sbjct: 270 NILP 273
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 98/174 (56%), Gaps = 7/174 (4%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT--EL 196
L+TMY CG + +VF + TRN+ WN +++G+ ++ D+ +F LSS
Sbjct: 458 LLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQS---GDIAKVFELLSSMKVEGF 514
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
+PD T +++ACG ++ + G VH A K+GL D V+ +LI MY KC V E
Sbjct: 515 QPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEART 574
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ + R+ V+WN+++ G+ ++G E+ DL +M+ +E P+ IT V+
Sbjct: 575 VFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRML--KERVPPNEITFTAVI 626
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 114/213 (53%), Gaps = 9/213 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC + +E + +H +V AS D + T LITMYS CG + +F +K R
Sbjct: 185 ILKACNNYSMLEKAREIHTVVKASG-METDVAVATALITMYSKCGEISLACEIFQKMKER 243
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A++ ++ + ++ E + P+ TF ++ +C + G +
Sbjct: 244 NVVSWTAIIQANAQHRKLNEAFELY-EKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRI 302
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H ++ GL DV V+NALI MY KC +++ + F+ M +R+++SW+++I G++++G+
Sbjct: 303 HSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQ 362
Query: 283 -----CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E F LL +M EG P+ +T +++L
Sbjct: 363 DKESLDEVFQLLERMR--REGVFPNKVTFMSIL 393
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 42/273 (15%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
+ + LN+A L ++ L A LL +C + + G+R+H +S D
Sbjct: 257 QHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHIS-ERGLETDV 315
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI-----FV 188
++ LITMY C D+R FD + R++ W+A+++G+ ++ Y D S+ +
Sbjct: 316 VVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSG-YQDKESLDEVFQLL 374
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
E + P+ TF ++KAC + G +H +K+G D + A+ MY KC
Sbjct: 375 ERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKC 434
Query: 249 AFVEEMVKLFEVMPERNL-------------------------------VSWNSIICGFS 277
+ E ++F M +N+ VSWN +I G++
Sbjct: 435 GSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYA 494
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++G + F+LL M EGF PD +T++++L
Sbjct: 495 QSGDIAKVFELLSSMK--VEGFQPDRVTIISIL 525
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +++ C + E GK VH+ + + D + LI YS G +VF +
Sbjct: 82 GCIIEHCAKLRRFEDGKMVHKQLD-ELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMT 140
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ W+++++ + N F E D ++P+ TF ++KAC + +
Sbjct: 141 LRDVVTWSSMIAAYAGNNHPAKAFDTF-ERMKDANIEPNRITFLSILKACNNYSMLEKAR 199
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H + G+ DV V+ ALI MY KC + ++F+ M ERN+VSW +II +++
Sbjct: 200 EIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHR 259
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F+L KM+ + G P+ +T V++L
Sbjct: 260 KLNEAFELYEKML--QAGISPNAVTFVSLL 287
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 91/187 (48%), Gaps = 11/187 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG +E GK VH + +D ++ T LI MYS CG ++R VFD + R
Sbjct: 524 ILEACGALSALERGKLVHA-EAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNR 582
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA+++G+ ++ + + + +F + + + P+ TF VI ACG V G +
Sbjct: 583 DTVAWNAMLAGYGQHGIGPEAVDLFKRMLKE-RVPPNEITFTAVISACGRAGLVQEGREI 641
Query: 223 -HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENG 280
M + ++ + G+ ++E + + MP E ++ W++++
Sbjct: 642 FRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLG------ 695
Query: 281 FSCESFD 287
+C+S D
Sbjct: 696 -ACKSHD 701
>gi|125528323|gb|EAY76437.1| hypothetical protein OsI_04370 [Oryza sativa Indica Group]
Length = 456
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 119/240 (49%), Gaps = 33/240 (13%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN------------------------ 136
G +LQ+ +D+ +G ++H V+ SN F+ +
Sbjct: 45 GTILQSASALRDLRVGAQLHACVAKLGLCSNVFVGSALVDHYAKMGSVREAQGALQDTRE 104
Query: 137 ------TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
T LI + G D+ R+F + RN+ WNA++ G +K L + +++F+E+
Sbjct: 105 PNVVSYTALIAGFLKNGMSGDAARLFRCMPERNVISWNAMIGGSSKAGLNEEAVNLFLEM 164
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
+ ++P+ TFPC++ + +G G +H A K DVF N+L++ Y +C
Sbjct: 165 CREG-VRPNESTFPCLLTSVANAGALGVGRSIHASAIKFLGKLDVFAGNSLVSFYARCGS 223
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+++ V F+ + +N+VSWN++ICG+++NG E+ D +M G PD +T++ +L
Sbjct: 224 LDDSVLAFKKIKNKNVVSWNALICGYAQNGRGEEALDAFRRMKAT--GLKPDRVTLLGLL 281
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 34/172 (19%)
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ A + T++ + D +++F + D + P+ FTF ++++ + D+ G+
Sbjct: 4 RDVVSATAAIGALTRSGRHRDAVALFSGILGDG-IVPNEFTFGTILQSASALRDLRVGAQ 62
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE---------------------------- 253
+H AK+GL +VFV +AL+ Y K V E
Sbjct: 63 LHACVAKLGLCSNVFVGSALVDHYAKMGSVREAQGALQDTREPNVVSYTALIAGFLKNGM 122
Query: 254 ---MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
+LF MPERN++SWN++I G S+ G + E+ +L ++M C EG P+
Sbjct: 123 SGDAARLFRCMPERNVISWNAMIGGSSKAGLNEEAVNLFLEM--CREGVRPN 172
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 10/178 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSN--DFIINTRLITMYSLCGFPLDSRRVFDSLK 160
LL + + + +G+ +H +++ +F D L++ Y+ CG DS F +K
Sbjct: 179 LLTSVANAGALGVGRSIH---ASAIKFLGKLDVFAGNSLVSFYARCGSLDDSVLAFKKIK 235
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGF 218
+N+ WNAL+ G+ +N + L F + + T LKPD T ++ C G+ D G+
Sbjct: 236 NKNVVSWNALICGYAQNGRGEEALDAFRRMKA-TGLKPDRVTLLGLLFGCNHAGLVDEGY 294
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICG 275
+ G++ + ++ ++ + ++ + E +P E +V W S+I G
Sbjct: 295 SLFRTAEMEQPGVLRPEHYA-CVVDLFSRAKRFDDAKRFLENLPFEPGIVFWKSLIGG 351
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 97/191 (50%), Gaps = 1/191 (0%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A +L+ CG D G+++H L + + T L+ MY CG D R VF+
Sbjct: 101 AVSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEG 160
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
+ RN+ W +L++G+ + +DV+++F + ++ + P+ FTF V+ A V
Sbjct: 161 MPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEG-VWPNPFTFTSVLSAVASQGAVDL 219
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G VH + K G VFV N+LI MY KC VEE +F M R++VSWN+++ G
Sbjct: 220 GRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLL 279
Query: 279 NGFSCESFDLL 289
N E+ L
Sbjct: 280 NEHQLEALQLF 290
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 11/212 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQF---SNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
+L A + +++G+RVH + S +F S F+ N+ LI MYS CG +++ VF +
Sbjct: 207 VLSAVASQGAVDLGRRVH---AQSVKFGCRSTVFVCNS-LINMYSKCGLVEEAKAVFRQM 262
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+TR++ WN L++G NE + L +F + S + K T+ VIK C + +
Sbjct: 263 ETRDMVSWNTLMAGLLLNEHQLEALQLFHD-SRASMAKLSQSTYSTVIKLCANLKQLALA 321
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSE 278
+H K G D V A++ Y KC +++ +F +MP +N+VSW ++I G +
Sbjct: 322 RQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQ 381
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
N + L +M E+ P+ T TVL
Sbjct: 382 NADIPLAAALFSRMR--EDNVKPNEFTYSTVL 411
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 88/167 (52%), Gaps = 2/167 (1%)
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
T + + + T L+ YS G ++ +F + +++ W+A++S +++ ++
Sbjct: 429 TNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNV 488
Query: 187 FVELSSDTELKPDNFTFPCVIKACGG-IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
F+++S +KP+ FT I AC A + G H ++ K + V +AL+ MY
Sbjct: 489 FIKMSMQG-MKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMY 547
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ ++ +FE +R+LVSWNS+I G++++G+S E+ D +M
Sbjct: 548 ARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQM 594
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 114/232 (49%), Gaps = 11/232 (4%)
Query: 82 KALSLLQENLHN-ADLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
+AL L ++ + A L ++T +++ C + K + + +++H V F +D + T +
Sbjct: 285 EALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCV-LKHGFHSDGNVMTAI 343
Query: 140 ITMYSLCGFPLDSRRVFDSLK-TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+ YS CG D+ +F + ++N+ W A++ G +N ++F + D +KP
Sbjct: 344 MDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDN-VKP 402
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ FT+ V+ A I +H K V AL+A Y K EE + +F
Sbjct: 403 NEFTYSTVLTASIPI----LLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIF 458
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+++ +++V+W++++ +S+ G + ++ IKM +G P+ T+ + +
Sbjct: 459 KMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKM--SMQGMKPNEFTISSAI 508
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGL-IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
V+K CG I D G +H + K G +V V AL+ MY KC VE+ +FE MP+R
Sbjct: 105 VLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKR 164
Query: 265 NLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
N+V+W S++ G+ + + L +M EG P+ T +VL
Sbjct: 165 NVVTWTSLLTGYVQGRACSDVMALFFRMRA--EGVWPNPFTFTSVL 208
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
I+ G++ H +S ++ + + + L+TMY+ G +R VF+ R+L WN+++S
Sbjct: 518 IDQGRQFHA-ISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMIS 576
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVG---FGSGV--HGM 225
G+ ++ + L F ++ + ++ D TF VI C G+ G F S V H +
Sbjct: 577 GYAQHGYSKEALDTFRQMET-VGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNI 635
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ M + ++ +Y + ++E + L E MP
Sbjct: 636 SPTMEHY------SCMVDLYSRAGKLDETMNLIEGMP 666
>gi|222637655|gb|EEE67787.1| hypothetical protein OsJ_25518 [Oryza sativa Japonica Group]
Length = 588
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 107/195 (54%), Gaps = 9/195 (4%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
+++H L S ++ F+ N L+T YS G ++R VFD + R+L WNAL+ G +
Sbjct: 31 RQLHALAWRSGLAADVFVGNA-LVTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLAQ 89
Query: 177 N-ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+ + +V+ +F+ + D +++PD + VI ACGG + G VHG A K+G+ G V
Sbjct: 90 DGDCPAEVIGVFLRMLRDGDVQPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGYV 149
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
+ N L+AMY KC +LF+ M ER++VSW + I E+ + F+ + +
Sbjct: 150 SIGNVLVAMYYKCGAPGSARRLFDAMSERDVVSWTTAISMDGEDALTL--FNGMRR---- 203
Query: 296 EEGFIPDVITVVTVL 310
+G P+ +T V ++
Sbjct: 204 -DGVPPNEVTFVALM 217
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 10/208 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ ACG E +E+G++VH + I L+ MY CG P +RR+FD++ R
Sbjct: 120 VIPACGGEGKLELGRQVHGF-AVKLGVEGYVSIGNVLVAMYYKCGAPGSARRLFDAMSER 178
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +S E D L++F + D + P+ TF ++ A V
Sbjct: 179 DVVSWTTAIS--MDGE---DALTLFNGMRRDG-VPPNEVTFVALMSALPADCPARGAQMV 232
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K + G+ SN+LI MY K +++ +F++MP R +++WN++I G+++NG
Sbjct: 233 HAACLKAAVSGEAAASNSLITMYAKARRMDDARMVFDLMPRREIIAWNAVISGYAQNGRC 292
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L M C P+ T +VL
Sbjct: 293 NDALELFSSMARC---LTPNETTFASVL 317
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 10/185 (5%)
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE 189
S + + LITMY+ D+R VFD + R + WNA++SG+ +N D L +F
Sbjct: 242 SGEAAASNSLITMYAKARRMDDARMVFDLMPRREIIAWNAVISGYAQNGRCNDALELFSS 301
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADV--GFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
++ L P+ TF V+ A + V +G H A MG +V+ ALI MY K
Sbjct: 302 MAR--CLTPNETTFASVLSAVTAVETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAK 359
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG--CEEGFIPDVIT 305
+EE K F +R+L++W +II + +G S+ ++ + G G PD +
Sbjct: 360 RGNLEESRKAFHETEQRSLIAWTAIISANARHG----SYGAVMSLFGDMARSGVAPDGVV 415
Query: 306 VVTVL 310
++ VL
Sbjct: 416 LLAVL 420
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 10/148 (6%)
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
S F + + LI MY+ G +SR+ F + R+L W A++S ++ Y V+S
Sbjct: 340 SMGFGDSEYVAGALIDMYAKRGNLEESRKAFHETEQRSLIAWTAIISANARHGSYGAVMS 399
Query: 186 IFVELSSDTELKPDNFTFPCVIKAC--GGIADVG---FGSGVHGMAAKMGLIGDVFVSNA 240
+F +++ + + PD V+ AC GG+ D G F S MAA G+ +
Sbjct: 400 LFGDMAR-SGVAPDGVVLLAVLTACRYGGMVDAGRDIFDS----MAADRGVELWPEHYSC 454
Query: 241 LIAMYGKCAFVEEMVKLFEVMPERNLVS 268
++ M G+ + E +L MP VS
Sbjct: 455 VVDMLGRAGRLAEAEELMMRMPAGPSVS 482
>gi|15233645|ref|NP_195514.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213618|sp|Q9SZK1.1|PP355_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g38010
gi|4467107|emb|CAB37541.1| putative protein [Arabidopsis thaliana]
gi|7270784|emb|CAB80466.1| putative protein [Arabidopsis thaliana]
gi|332661463|gb|AEE86863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 6/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ +ACG I GK++H +V+ F +D + L+ Y +CG ++ +VF + R
Sbjct: 112 VFKACGKFSGIREGKQIHGIVT-KMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVR 170
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +++GFT+ LY + L F S +++P+ T+ CV+ + G + + G G+
Sbjct: 171 DVVSWTGIITGFTRTGLYKEALDTF----SKMDVEPNLATYVCVLVSSGRVGCLSLGKGI 226
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ K + + NALI MY KC + + +++F + +++ VSWNS+I G S
Sbjct: 227 HGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERS 286
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL +M G PD + +VL
Sbjct: 287 KEAIDLF-SLMQTSSGIKPDGHILTSVL 313
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L + G + +GK +H L+ + LI MY C D+ RVF L+ +
Sbjct: 210 VLVSSGRVGCLSLGKGIHGLILKRASLIS-LETGNALIDMYVKCEQLSDAMRVFGELEKK 268
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN+++SG E + + +F + + + +KPD V+ AC + V G V
Sbjct: 269 DKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWV 328
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G+ D + A++ MY KC ++E +++F + +N+ +WN+++ G + +G
Sbjct: 329 HEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHG 388
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
ES +M+ + GF P+++T + L
Sbjct: 389 LESLRYFEEMV--KLGFKPNLVTFLAAL 414
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 97/213 (45%), Gaps = 13/213 (6%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
VLL+ + + K++ + +D IIN + + F S + S+++
Sbjct: 8 VLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRS 67
Query: 162 -RNLFQWNALVSGFT---KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
+ F +N L+S + K + FV PD FTFP V KACG + +
Sbjct: 68 VLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVS----NGFSPDMFTFPPVFKACGKFSGIR 123
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G +HG+ KMG D++V N+L+ YG C K+F MP R++VSW II GF+
Sbjct: 124 EGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFT 183
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ D KM P++ T V VL
Sbjct: 184 RTGLYKEALDTFSKM-----DVEPNLATYVCVL 211
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 109/208 (52%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L++ C +++ G+ V + V +S + L++M+ G ++ VF + R
Sbjct: 39 LIRLCENKRGYSEGEYVWKAVLSSLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGER 98
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+LF WN LV G+TK + + L ++ + ++PD +TFP V+++C G D+ G V
Sbjct: 99 DLFSWNVLVGGYTKAGFFDEALCLYHRILW-AGIRPDVYTFPSVLRSCAGAMDLVRGREV 157
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + DV V NALI MY KC V LF+ MP R+ +SWN++I G+ EN
Sbjct: 158 HAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDEC 217
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E +L +M E PD++T+ +V+
Sbjct: 218 LEGLELFFRMR--ELSIDPDLMTMTSVI 243
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L++C D+ G+ VH V F D + LITMY CG + +R +FD + TR
Sbjct: 141 VLRSCAGAMDLVRGREVHAHV-VRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTR 199
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WNA++SG+ +N+ + L +F + + + PD T VI AC + D G+ +
Sbjct: 200 DRISWNAMISGYFENDECLEGLELFFRMR-ELSIDPDLMTMTSVISACELLGDERLGTQL 258
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G++ V N+LI MY +E +F M R++VSW +II G +N
Sbjct: 259 HSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLP 318
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ + M G +PD +T+ +VL
Sbjct: 319 DKALETYKTME--ITGTMPDEVTIASVL 344
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 6/218 (2%)
Query: 93 NADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDS 152
+ DL T V+ AC D +G ++H V T + + + LI MY G ++
Sbjct: 233 DPDLMTMTSVI-SACELLGDERLGTQLHSYV-VRTAYDGNISVYNSLIQMYLSVGHWKEA 290
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
VF ++ R++ W ++SG N L L + + T PD T V+ AC
Sbjct: 291 ESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEI-TGTMPDEVTIASVLSACAS 349
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
+ + G +H +A + G I V V+N+LI MY KC +E+ +++F +P+++++SW S+
Sbjct: 350 LGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSV 409
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I G N E+ KM+ + P+ +T+++ L
Sbjct: 410 INGLRINNRCFEALIFFRKMILKSK---PNSVTLISAL 444
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 103/208 (49%), Gaps = 6/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +++G ++HEL + + N+ LI MYS C + +F + +
Sbjct: 343 VLSACASLGQLDMGMKLHELAERTGHILYVVVANS-LIDMYSKCKRIEKALEIFHQIPDK 401
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W ++++G N + L F ++ + KP++ T + AC + + G +
Sbjct: 402 DVISWTSVINGLRINNRCFEALIFFRKMILKS--KPNSVTLISALSACARVGALMCGKEI 459
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K G+ D F+ NA++ +Y +C + + F + E+++ +WN ++ G+++ G
Sbjct: 460 HAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFN-LNEKDVGAWNILLTGYAQKGKG 518
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+L +M+ E PD +T +++L
Sbjct: 519 AMVMELFKRMV--ESEINPDDVTFISLL 544
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + GK +H + + F+ N ++ +Y CG + F+ L ++
Sbjct: 444 LSACARVGALMCGKEIHAHALKAGMGFDGFLPNA-ILDLYVRCGRMRTALNQFN-LNEKD 501
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
+ WN L++G+ + V+ +F + ++E+ PD+ TF ++ AC
Sbjct: 502 VGAWNILLTGYAQKGKGAMVMELFKRMV-ESEINPDDVTFISLLCAC 547
>gi|255539304|ref|XP_002510717.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551418|gb|EEF52904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 742
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 102/174 (58%), Gaps = 3/174 (1%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
T +IT +S G+ ++ F+ + RN+ WN+++S + ++ L ++V + + +
Sbjct: 427 TSMITAFSQAGYFRKAQACFNKMPERNVITWNSMISMYIQHGFQEWGLKLYVRMQRE-RI 485
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
PD+ TF I AC +A + G+ + A K+G DV V+N+L+ MY +C +EE K
Sbjct: 486 APDDITFATSISACADLAMLKLGNQIVAQAEKLGFGSDVSVANSLVTMYSRCGQIEEARK 545
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+++ +NLVSWNS+I G+++NG + ++ M+ E +IPD I+ ++VL
Sbjct: 546 AFDLVSMKNLVSWNSMIAGYAQNGHGRVAIEVFKNMLEME--YIPDHISYLSVL 597
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 95/179 (53%), Gaps = 2/179 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC D+E G +H + +D++ N L+ MY+ CG +RRVF+SL
Sbjct: 262 VLSACTSIHDLEWGAHLHARIIRKEIILDDYVGNG-LVYMYAKCGHLKFARRVFNSLTEH 320
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N W +L++G + L + L +F ++ + + D FTF V+K C G +
Sbjct: 321 NAVSWTSLINGVARCGLKEEALLLFNKMR-EVLVALDEFTFATVLKVCSHPNFNFTGRQL 379
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
H + K G+ V V NALI MY KC ++ +F++MP RN++SW S+I FS+ G+
Sbjct: 380 HALTTKTGMGSIVTVGNALITMYSKCGDTQKADCVFKMMPVRNIISWTSMITAFSQAGY 438
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 33/220 (15%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
++ACG ++ ++H L F +D I T ++ MY CG + RVF ++ +
Sbjct: 131 MKACGALGCFKLAIQLHGLFE-KFDFGSDKSIETSVMGMYIKCGAFTYADRVFLGIRQPS 189
Query: 164 LF-------------------------------QWNALVSGFTKNELYTDVLSIFVELSS 192
LF W+ ++S +++ LS+F+E+ +
Sbjct: 190 LFCFNSMLYCYSNSYGVGKALDLFNRIPERDSVSWSTIISILSRHGFGVPTLSMFIEMWT 249
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+P++ TF CV+ AC I D+ +G+ +H + +I D +V N L+ MY KC ++
Sbjct: 250 QG-FRPNSMTFACVLSACTSIHDLEWGAHLHARIIRKEIILDDYVGNGLVYMYAKCGHLK 308
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
++F + E N VSW S+I G + G E+ L KM
Sbjct: 309 FARRVFNSLTEHNAVSWTSLINGVARCGLKEEALLLFNKM 348
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 123 VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTD 182
V A F N F NT +IT S +++VFD + R+ WN+++SG+ +N Y +
Sbjct: 48 VFADMTFRNVFSYNT-MITGLSKAEQIDKAKKVFDEMPERDSVSWNSMMSGYFRNGKYEE 106
Query: 183 VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALI 242
V+ +FV + + + +F C +KACG + +HG+ K D + +++
Sbjct: 107 VVKVFVLMIRNFTCIVNLLSFSCAMKACGALGCFKLAIQLHGLFEKFDFGSDKSIETSVM 166
Query: 243 AMYGKC-AF------------------------------VEEMVKLFEVMPERNLVSWNS 271
MY KC AF V + + LF +PER+ VSW++
Sbjct: 167 GMYIKCGAFTYADRVFLGIRQPSLFCFNSMLYCYSNSYGVGKALDLFNRIPERDSVSWST 226
Query: 272 IICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
II S +GF + + I+M +GF P+ +T VL
Sbjct: 227 IISILSRHGFGVPTLSMFIEMW--TQGFRPNSMTFACVL 263
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 99/220 (45%), Gaps = 39/220 (17%)
Query: 1 MPLYNCSSACLWSPLFPSLRQ----KKSQPQFPATVIQRNKHSLRSIFKEKSSLSLSAKT 56
MP+ N S W+ + + Q +K+Q F NK R++ S +S+ +
Sbjct: 418 MPVRNIIS---WTSMITAFSQAGYFRKAQACF-------NKMPERNVITWNSMISMYIQ- 466
Query: 57 NNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIG 116
H QE L + + +E + D+ AT + AC D+ +
Sbjct: 467 --------HGFQEW--------GLKLYVRMQRERIAPDDITFATSI--SACA---DLAML 505
Query: 117 KRVHELVSASTQ--FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
K +++V+ + + F +D + L+TMYS CG ++R+ FD + +NL WN++++G+
Sbjct: 506 KLGNQIVAQAEKLGFGSDVSVANSLVTMYSRCGQIEEARKAFDLVSMKNLVSWNSMIAGY 565
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
+N + +F + + E PD+ ++ V+ G A
Sbjct: 566 AQNGHGRVAIEVFKNM-LEMEYIPDHISYLSVLSDLLGRA 604
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 99/177 (55%), Gaps = 3/177 (1%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ +L+ Y+ +R+VFD + RN+ N ++ + N Y + + +F +
Sbjct: 76 LGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCG-C 134
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
++PD++TFPCV+KAC + G +HG A K+GL +FV N L++MYGKC F+ E
Sbjct: 135 NVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEA 194
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ + M R++VSWNS++ G+++N ++ ++ +M + D T+ ++LP
Sbjct: 195 RLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK--ISHDAGTMASLLP 249
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 85/158 (53%), Gaps = 3/158 (1%)
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
+ +F + ++L WN ++ + KN + + + ++ + +D +PD + V+ ACG
Sbjct: 263 KDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADG-FEPDAVSITSVLPACGD 321
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
+ + G +HG + LI ++ + NALI MY KC +E+ +FE M R++VSW ++
Sbjct: 322 TSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAM 381
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I + +G C++ L K+ + G +PD I VT L
Sbjct: 382 ISAYGFSGRGCDAVALFSKLQ--DSGLVPDSIAFVTTL 417
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 37/209 (17%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC I IG+++H + S+ + L++MY CGF ++R V D + R
Sbjct: 146 VLKACSCSGTIVIGRKIHG-SATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR 204
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+LV G+ +N+ + D L + C + V
Sbjct: 205 DVVSWNSLVVGYAQNQRFDDALEV-----------------------CREMESVKISHDA 241
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
MA+ + + + N + +V++M F M +++LVSWN +I + +N
Sbjct: 242 GTMASLLPAVSNTTTENVM--------YVKDM---FFKMGKKSLVSWNVMIGVYMKNAMP 290
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ +L +M +GF PD +++ +VLP
Sbjct: 291 VEAVELYSRMEA--DGFEPDAVSITSVLP 317
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG + +GK++H + N ++ LI MY+ CG +R VF+++K+R
Sbjct: 315 VLPACGDTSALSLGKKIHGYIERKKLIPN-LLLENALIDMYAKCGCLEKARDVFENMKSR 373
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
++ W A++S + + D +++F +L D+ L PD+ F + AC
Sbjct: 374 DVVSWTAMISAYGFSGRGCDAVALFSKL-QDSGLVPDSIAFVTTLAAC 420
>gi|302805176|ref|XP_002984339.1| hypothetical protein SELMODRAFT_120395 [Selaginella moellendorffii]
gi|300147727|gb|EFJ14389.1| hypothetical protein SELMODRAFT_120395 [Selaginella moellendorffii]
Length = 479
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 11/248 (4%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADLKEATGVL--LQACGHEKDIEIGKRVHELVSAST 127
IT ++ +S + AL L + H + ++ L AC + GK +H L+
Sbjct: 132 ITGFAQQGRS-SDALHLFRRMQHEGVIANKITLVATLSACTDSSSLADGKFLHSLI-VEK 189
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
+ +D I+ L+TMY+ CG D+RR F +++ N+ W A++S + L IF
Sbjct: 190 KLESDVIVGGALVTMYTNCGSLDDARRAFGAVRRPNVIAWTAMISACVHFGELDEALQIF 249
Query: 188 ----VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG-DVFVSNALI 242
+ D EL D F +I AC + D+ G +H + G I DV + NAL+
Sbjct: 250 RLIEAQCLDDRELLLDGIVFVPLINACARLTDLSQGRRLHARISSDGSIKVDVQLGNALV 309
Query: 243 AMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
MY KC VEE ++F+ M R+ VSWN++I ++ G S + + +M +EG PD
Sbjct: 310 NMYSKCGSVEEAARVFDGMKYRSTVSWNTMISAYAIAGHSEKVLWMFHRMQ--QEGVEPD 367
Query: 303 VITVVTVL 310
++ V VL
Sbjct: 368 EVSFVGVL 375
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 142 MYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF 201
MY+ CG D+ FDS++ RN+ W +V+ F T L +F + ++ + P+
Sbjct: 1 MYAKCGSARDALAAFDSMRDRNVVSWTTVVTAFAHAGHPTAALRLFQRMLAEG-IAPNKV 59
Query: 202 TFPCVIKACGGIADV-GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV 260
TF V+ AC ++ G +H + GL D V+ +L MYGKC V+ + +
Sbjct: 60 TFVAVLHACSDSRELLDPGRMIHRCCEESGLGRDRSVAISLANMYGKCGDVDTAASMLDE 119
Query: 261 MPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
M + ++++W+++I GF++ G S ++ L +M EG I + IT+V L
Sbjct: 120 MFQPDVIAWSAVITGFAQQGRSSDALHLFRRMQ--HEGVIANKITLVATL 167
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 2/168 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ AC D+ G+R+H +S+ D + L+ MYS CG ++ RVFD +K R
Sbjct: 272 LINACARLTDLSQGRRLHARISSDGSIKVDVQLGNALVNMYSKCGSVEEAARVFDGMKYR 331
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN ++S + VL +F + + ++PD +F V+ AC V G
Sbjct: 332 STVSWNTMISAYAIAGHSEKVLWMFHRMQQEG-VEPDEVSFVGVLSACNAAGTVEEGCKY 390
Query: 223 HGMAA-KMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSW 269
G+ + ++ + LI + G+ +++E +L M E ++++W
Sbjct: 391 FGLCCEEYRILLEPQHFGCLIDLLGRVGYLDEAERLLRRMKEPDVMAW 438
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 79/172 (45%), Gaps = 3/172 (1%)
Query: 103 LLQACGHEKDI-EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L AC +++ + G+ +H S D + L MY CG + + D +
Sbjct: 64 VLHACSDSRELLDPGRMIHRCCEESG-LGRDRSVAISLANMYGKCGDVDTAASMLDEMFQ 122
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ W+A+++GF + +D L +F + + + + T + AC + + G
Sbjct: 123 PDVIAWSAVITGFAQQGRSSDALHLFRRMQHEGVI-ANKITLVATLSACTDSSSLADGKF 181
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
+H + + L DV V AL+ MY C +++ + F + N+++W ++I
Sbjct: 182 LHSLIVEKKLESDVIVGGALVTMYTNCGSLDDARRAFGAVRRPNVIAWTAMI 233
>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
Length = 766
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 5/192 (2%)
Query: 107 CGHEKDIEIGKRVHELVSASTQ----FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
C + + G+ VH + AS+ +++ I++ LITMY CG P +R VFD + R
Sbjct: 52 CSRLRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDR 111
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N W A+++ +N D + +F + + PD F I AC + D+G G V
Sbjct: 112 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTM-PDQFALGSAICACSELGDLGLGRQV 170
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K D+ V NAL+ MY K V + LFE + +++L+SW SII G ++ G
Sbjct: 171 HAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGRE 230
Query: 283 CESFDLLIKMMG 294
++ + +M+
Sbjct: 231 MDALQIFREMIA 242
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 111/213 (52%), Gaps = 4/213 (1%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A G + AC D+ +G++VH + + +D I+ L+TMYS G D +F+
Sbjct: 150 ALGSAICACSELGDLGLGRQVHA-QAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFER 208
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD-VG 217
++ ++L W ++++G + D L IF E+ ++ P+ F F V +AC + + +
Sbjct: 209 IRDKDLISWGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLE 268
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
+G +HG++ K L + + +L MY +C ++ K+F + +LVSWNS+I FS
Sbjct: 269 YGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFS 328
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ L +M + G PD ITV+ +L
Sbjct: 329 AKGLLSEAMVLFSEMR--DSGLRPDGITVMALL 359
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 90/161 (55%), Gaps = 2/161 (1%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E G+++H VS Q + L MY+ C +R+VF +++ +L WN+L++
Sbjct: 267 LEYGEQIHG-VSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLIN 325
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
F+ L ++ + +F E+ D+ L+PD T ++ AC G + G +H K+GL
Sbjct: 326 AFSAKGLLSEAMVLFSEMR-DSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLG 384
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
GDV VSN+L++MY +C + +F +R++V+WNSI+
Sbjct: 385 GDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSIL 425
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 5/210 (2%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL AC + G+ +H + D I++ L++MY+ C + VF
Sbjct: 357 ALLCACVGYDALHQGRSIHSYL-VKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHD 415
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R++ WN++++ +++ DV +F L D + V+ A +
Sbjct: 416 RDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMP-SLDRISLNNVLSASAELGYFEMVKQ 474
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE-RNLVSWNSIICGFSENG 280
VH A K+GL+GD +SN LI Y KC +++ KLFE+M R++ SW+S+I G+++ G
Sbjct: 475 VHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFG 534
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ E+ DL +M G P+ +T V VL
Sbjct: 535 YAKEALDLFARMRNL--GVKPNHVTFVGVL 562
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 70 ITTLCEESKSLN---KALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSAS 126
I T C + + L K SLL ++ + D VL A E+ K+VH +
Sbjct: 424 ILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVL-SASAELGYFEMVKQVHAY-AFK 481
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT-RNLFQWNALVSGFTKNELYTDVLS 185
D +++ LI Y+ CG D+ ++F+ + T R++F W++L+ G+ + + L
Sbjct: 482 VGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALD 541
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG-MAAKMGLIGDVFVSNALIAM 244
+F + + +KP++ TF V+ AC + V G + M + G++ + ++ +
Sbjct: 542 LFARMR-NLGVKPNHVTFVGVLTACSRVGLVDEGCYYYSIMKPEYGIVPTREHCSCVLDL 600
Query: 245 YGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
+ + E K + MP E +++ W +++
Sbjct: 601 LARAGRLSEAAKFVDQMPFEPDIIMWKTLL 630
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 116/242 (47%), Gaps = 32/242 (13%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFS---------------------------- 130
A L+ C D+ +G+++H L S Q
Sbjct: 373 ALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFM 432
Query: 131 --NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
D + T +IT +S G +R FD + T+N+ WNA++ + ++ D L ++
Sbjct: 433 NEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYN 492
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
+ S+ +++PD T+ + K C + G + G K+GLI D V+NA+I MY KC
Sbjct: 493 VMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKC 552
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
+ E K+F+ + +++VSWN++I G+S++G ++ ++ ++ + G PD I+ V
Sbjct: 553 GRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDIL--KRGAKPDYISYVA 610
Query: 309 VL 310
VL
Sbjct: 611 VL 612
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC + GK++H V + + ++ + L+ +Y+ CG +++ VF+SL RN
Sbjct: 277 LTACARLSSLRWGKQLHAQVIRNLPCIDPYVASA-LVELYAKCGCFKEAKGVFNSLHDRN 335
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
W L++GF ++ +T+ + +F ++ ++ + D F +I C D+ G +H
Sbjct: 336 NVAWTVLIAGFLQHGCFTESVELFNQMRAEL-MTLDQFALATLISGCCSRMDLCLGRQLH 394
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+ K G I V VSN+LI+MY KC ++ +F M E+++VSW S+I S+ G
Sbjct: 395 SLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVG 451
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 31/192 (16%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ I + ++ Y G D+ +F + R++ WN L+SG+ +++ Y L FV +
Sbjct: 70 NVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMH 129
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF- 250
+ P+ FTF +K+CG + + + GM K G D V+ AL+ M+ +C
Sbjct: 130 RSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTV 189
Query: 251 ------------------------------VEEMVKLFEVMPERNLVSWNSIICGFSENG 280
V+ ++LF+ MPER++VSWN ++ S++G
Sbjct: 190 DLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSG 249
Query: 281 FSCESFDLLIKM 292
E+ D+++ M
Sbjct: 250 RVREALDMVVDM 261
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 76/138 (55%), Gaps = 1/138 (0%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
+FDS+ R++ WN +VS +++ + L + V++ S ++ D+ T+ + AC ++
Sbjct: 226 LFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKG-VRLDSTTYTSSLTACARLS 284
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+ +G +H + D +V++AL+ +Y KC +E +F + +RN V+W +I
Sbjct: 285 SLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIA 344
Query: 275 GFSENGFSCESFDLLIKM 292
GF ++G ES +L +M
Sbjct: 345 GFLQHGCFTESVELFNQM 362
>gi|357145591|ref|XP_003573696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Brachypodium distachyon]
Length = 618
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 6/209 (2%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL ACG + + +GK +H +++ S Q + I + L+ Y CG + R+ +
Sbjct: 389 LLSACGSIQSLRLGKELHAQIIKNSIQ--ENLQIGSTLVWCYCKCGEYTYAARILKDMPD 446
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R+ W A++SG+ + L ++ D +KP+ +T+ +KAC + + G
Sbjct: 447 RDAISWTAMISGYNSVGHNAEALKSLDDMLWDG-VKPNTYTYSSALKACAKLEALQDGRR 505
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG+ K +VFV ++LI MY +C V++ ++F+ MPE NLV+W II GF++NG
Sbjct: 506 IHGVVNKTPAFLNVFVGSSLIDMYMRCGNVDDARRVFDAMPEHNLVTWKVIITGFAQNGL 565
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F + M +EG D + VL
Sbjct: 566 CEEAFKYMYLMQ--QEGHDVDDFVLSKVL 592
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 116/213 (54%), Gaps = 8/213 (3%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
EA LL++CG D+ +RVH + S F+ N LI Y+ D+R+VFD
Sbjct: 85 EALASLLRSCGSVDDV---RRVHAISVRSPDGPGMFVANN-LINAYARFHEISDARKVFD 140
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
+ +++ W A+++G+ K+ Y +V+ +F+++ + ++ ++ TF C++K+CG +
Sbjct: 141 EMPDKSVVSWTAIINGYQKSGNYNEVVRLFLDMVG-SGVRGNSLTFVCLLKSCGEQCNTK 199
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G VH K G +V + +A++ Y +C + +F+ M R+++SW ++I +
Sbjct: 200 LGRQVHCCVVKGGW-SNVIMDSAVVHFYAQCGHIASASTMFDKMASRDVISWTTMITAYV 258
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++G ++ ++ M+ EG+ P+ TV ++L
Sbjct: 259 QHGRGDKALEMFSVMV--SEGYYPNEFTVCSIL 289
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 96/178 (53%), Gaps = 3/178 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL++CG + + ++G++VH V +SN I+++ ++ Y+ CG + +FD + +R
Sbjct: 188 LLKSCGEQCNTKLGRQVHCCV-VKGGWSN-VIMDSAVVHFYAQCGHIASASTMFDKMASR 245
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +++ + ++ L +F + S+ P+ FT ++KAC FG +
Sbjct: 246 DVISWTTMITAYVQHGRGDKALEMFSVMVSEG-YYPNEFTVCSILKACSDEKAFRFGKQL 304
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
HG K D+ V +AL+ MY + V + +F+ M RN ++W S+I G++++G
Sbjct: 305 HGAIVKKLYKDDIHVGSALVTMYARLGEVFDAQAVFDKMARRNTITWTSMISGYAQSG 362
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
PD ++++CG + DV VH ++ + +FV+N LI Y + + + K+
Sbjct: 82 PDAEALASLLRSCGSVDDV---RRVHAISVRSPDGPGMFVANNLINAYARFHEISDARKV 138
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ MP++++VSW +II G+ ++G E L + M+G G + +T V +L
Sbjct: 139 FDEMPDKSVVSWTAIINGYQKSGNYNEVVRLFLDMVG--SGVRGNSLTFVCLL 189
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 113/238 (47%), Gaps = 34/238 (14%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC + + +++GK+VH V FS F + L+T+Y CG ++R +F+ + +
Sbjct: 292 VIRACANARLLQLGKQVHAYVLRREDFS--FHFDNSLVTLYYKCGKFNEARAIFEKMPAK 349
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL-------------------------- 196
+L WNAL+SG+ + + IF E+ L
Sbjct: 350 DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMK 409
Query: 197 ----KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+P ++ F IK+C + G H K+G + NALI MY KC VE
Sbjct: 410 REGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVE 469
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E ++F MP + VSWN++I ++G E+ D+ +M+ ++G PD IT +TVL
Sbjct: 470 EAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEML--KKGIRPDRITFLTVL 525
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVEL-SSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
L +NA++SG+ LY + L + + SS EL D FT+P VI+AC + G V
Sbjct: 251 LVAYNAMISGYVNCGLYQEALEMVRRMVSSGIEL--DEFTYPSVIRACANARLLQLGKQV 308
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + F N+L+ +Y KC E +FE MP ++LVSWN+++ G+ +G
Sbjct: 309 HAYVLRREDFSFHF-DNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHI 367
Query: 283 CESFDLLIKMM 293
E+ L+ K M
Sbjct: 368 GEA-KLIFKEM 377
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 20/168 (11%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDS--LKTRNLFQWNALVSGFTKNELYTDVLSIFVE 189
D I T +++ Y G +R VF+ + R+ +NA+++GF+ N +++F +
Sbjct: 79 DKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 190 LSSDTELKPDNFTFPCVIKACGGIAD-----VGFGSGVHGMAAKMGLIGDVFVSNALIAM 244
+ + KPD+FT+ V+ + D V F H A K G VSNAL+++
Sbjct: 139 MKHEG-FKPDDFTYASVLAGLALVVDDEKQCVQF----HAAALKSGAGYVTSVSNALVSV 193
Query: 245 YGKCA----FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
Y +CA + K+F+ +PE++ SW +++ G+ +NG FDL
Sbjct: 194 YSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNG----CFDL 237
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F + LITMY+ CG ++++VF ++ + WNAL++ ++ + + ++
Sbjct: 448 FDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYE 507
Query: 189 ELSSDTELKPDNFTFPCVIKAC--GGIADVG 217
E+ ++PD TF V+ AC G+ D G
Sbjct: 508 EMLKKG-IRPDRITFLTVLTACSHAGLVDQG 537
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ ACG D ++GK V E V N ++ T LI MY+ CG +RR+FD +++R
Sbjct: 226 VVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLM-TALIDMYAKCGELGKARRLFDGMQSR 284
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+A++SG+T+ + + L++F E+ E++P++ T V+ AC + + G V
Sbjct: 285 DVVAWSAMISGYTQADQCREALALFSEMQL-AEVEPNDVTMVSVLSACAVLGALETGKWV 343
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + L + + AL+ Y KC +++ V+ FE MP +N +W ++I G + NG
Sbjct: 344 HSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRG 403
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L M + P +T + VL
Sbjct: 404 REALELFSSMR--KASIEPTDVTFIGVL 429
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 118/231 (51%), Gaps = 7/231 (3%)
Query: 83 ALSLLQENLHNADL---KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
AL L E L A + + L++C +++G+ + ++ F++++ L
Sbjct: 102 ALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSS-L 160
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
I MY+ C ++ +FD+++ + WNA+++ + KN + +V+ +F + + + D
Sbjct: 161 IHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGML-EVGVAFD 219
Query: 200 NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
T V+ ACG I D G V + GL+ + + ALI MY KC + + +LF+
Sbjct: 220 EITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFD 279
Query: 260 VMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
M R++V+W+++I G+++ E+ L +M E P+ +T+V+VL
Sbjct: 280 GMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAE--VEPNDVTMVSVL 328
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 2/144 (1%)
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
+N L+ D L +FVE+ + PD T C +K+C + + G G+ A
Sbjct: 86 YNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYA 145
Query: 227 AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESF 286
K GL+ D FV ++LI MY C V LF+ + E +V WN+II + +NG E
Sbjct: 146 VKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVV 205
Query: 287 DLLIKMMGCEEGFIPDVITVVTVL 310
++ M+ E G D IT+V+V+
Sbjct: 206 EMFKGML--EVGVAFDEITLVSVV 227
>gi|302770356|ref|XP_002968597.1| hypothetical protein SELMODRAFT_89230 [Selaginella moellendorffii]
gi|300164241|gb|EFJ30851.1| hypothetical protein SELMODRAFT_89230 [Selaginella moellendorffii]
Length = 631
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 110/211 (52%), Gaps = 8/211 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ CG + + G+R+H + T D + LI MY CG D+R VF+ +++
Sbjct: 59 LLQQCGRSRSLPDGRRIHAEI-VDTGLGKDLFLGNHLIQMYGKCGAMEDARAVFEKIESP 117
Query: 163 N-LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
N + W A++SGF + L F ++ ++ ++P+ TF ++ AC DV G+
Sbjct: 118 NSVVSWTAMISGFALHGREDLALDFFRKMVAEG-VRPNEVTFVSILGACAAARDVKHGTA 176
Query: 222 VHGMAAKMGLIGDVFVS--NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H + + G ++S ALI MYGKC E ++FE M R+LV WN++I S+
Sbjct: 177 IHEL-VESSEFGRSYLSVGTALIDMYGKCGRPELASRVFEKMERRDLVVWNAMITVCSQQ 235
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G ++ L ++M EG PD +T+V L
Sbjct: 236 GLDEQALRLF-RVMDL-EGHTPDEVTLVAAL 264
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 115/213 (53%), Gaps = 12/213 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFI-INTRLITMYSLCGFPLDSRRVFDSLKT 161
+L AC +D++ G +HELV S++F ++ + T LI MY CG P + RVF+ ++
Sbjct: 161 ILGACAAARDVKHGTAIHELVE-SSEFGRSYLSVGTALIDMYGKCGRPELASRVFEKMER 219
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIF--VELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
R+L WNA+++ ++ L L +F ++L T PD T ++AC + + G
Sbjct: 220 RDLVVWNAMITVCSQQGLDEQALRLFRVMDLEGHT---PDEVTLVAALEACSNLNSLAAG 276
Query: 220 SGVHGMAAKMGLIGDV--FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
+H + GL + ++ AL+ MYG+ +E+ +++FE M NLV+W ++I F+
Sbjct: 277 KKLHELILDAGLDSSIKMVLATALVNMYGRYGQLEDALRVFEKMNHWNLVAWTALIAAFA 336
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++G + DL +M EG D I ++VL
Sbjct: 337 QHG-DVHAIDLSWRMH--LEGVQADDIVFLSVL 366
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
Query: 70 ITTLCEESKSLNKALSLLQ-ENLHNADLKEATGVL-LQACGHEKDIEIGKRVHELV-SAS 126
+ T+C + +AL L + +L E T V L+AC + + GK++HEL+ A
Sbjct: 228 MITVCSQQGLDEQALRLFRVMDLEGHTPDEVTLVAALEACSNLNSLAAGKKLHELILDAG 287
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
S ++ T L+ MY G D+ RVF+ + NL W AL++ F + + DV +I
Sbjct: 288 LDSSIKMVLATALVNMYGRYGQLEDALRVFEKMNHWNLVAWTALIAAFAQ---HGDVHAI 344
Query: 187 FVELSSDTE-LKPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIA 243
+ E ++ D+ F V+ AC G+ + G S GM A G+ G + ++
Sbjct: 345 DLSWRMHLEGVQADDIVFLSVLHACSHAGVLEAGL-SCFQGMVADFGVRGGAAHYSCMVD 403
Query: 244 MYGKCAFVEEMVKLFEVMP 262
+ +C V E +L MP
Sbjct: 404 LLARCGRVAEAEELLHSMP 422
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
F +++ CG + G +H GL D+F+ N LI MYGKC +E+ +FE +
Sbjct: 55 AFASLLQQCGRSRSLPDGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEDARAVFEKI 114
Query: 262 PERN-LVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
N +VSW ++I GF+ +G + D KM+ EG P+ +T V++L
Sbjct: 115 ESPNSVVSWTAMISGFALHGREDLALDFFRKMVA--EGVRPNEVTFVSIL 162
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 111/216 (51%), Gaps = 11/216 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG G H L+ + SN FI N L+ MYS CG ++ +FD + R
Sbjct: 168 VLKACGELPSYRCGSAFHGLICCNGFESNVFICNA-LVAMYSRCGSLEEASMIFDEITQR 226
Query: 163 ---NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDN-----FTFPCVIKACGGIA 214
++ WN++VS K+ L +F +++ KP N + ++ ACG +
Sbjct: 227 GIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLK 286
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
V VHG A + G DVFV NALI Y KC +E VK+F +M +++VSWN+++
Sbjct: 287 AVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVA 346
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G+S++G +F+L M +E DV+T V+
Sbjct: 347 GYSQSGNFEAAFELFKNMR--KENIPLDVVTWTAVI 380
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 119/246 (48%), Gaps = 18/246 (7%)
Query: 81 NKALSLLQENLHNADLKEATGVL--LQACGHEKDIEIGKRVHE------LVSASTQFSN- 131
++AL+L ++ + + L ++ L AC G +H L++ F
Sbjct: 390 HEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGE 449
Query: 132 --DFIINTRLITMYSLCGFPLDSRRVFDS--LKTRNLFQWNALVSGFTKNELYTDVLSIF 187
D ++ LI MYS C +R +FD L+ RN+ W ++ G + D L +F
Sbjct: 450 DEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLF 509
Query: 188 VELSSDTE-LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI--GDVFVSNALIAM 244
VE+ S+ + P+ +T C++ AC +A + G +H + FV+N LI M
Sbjct: 510 VEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDM 569
Query: 245 YGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVI 304
Y KC V+ +F+ M +++ +SW S++ G+ +G E+ D+ KM + GF+PD I
Sbjct: 570 YSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMR--KAGFVPDDI 627
Query: 305 TVVTVL 310
T + VL
Sbjct: 628 TFLVVL 633
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 8/184 (4%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
+ T ++ Y CG + V + + WN L+ K +++ +
Sbjct: 98 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR-A 156
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+PD+FT P V+KACG + GS HG+ G +VF+ NAL+AMY +C +EE
Sbjct: 157 GTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 216
Query: 255 VKLFEVMPER---NLVSWNSIICGFSENGFSCESFDLLIKM-MGCEEGFI---PDVITVV 307
+F+ + +R +++SWNSI+ ++ + + DL KM + E D+I++V
Sbjct: 217 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 276
Query: 308 TVLP 311
+LP
Sbjct: 277 NILP 280
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 124/253 (49%), Gaps = 12/253 (4%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSAST 127
+++LC+ + L +AL L+E + + + +L AC H + + GK +H +
Sbjct: 270 LSSLCQNEQFL-EALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNG 328
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
+ + + L+ MY C L RVFD + R + WNA+++G+ +NE + L +F
Sbjct: 329 SLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLF 388
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+E+ L ++ T V+ AC +HG K GL D FV NAL+ MY +
Sbjct: 389 IEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSR 448
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEE---------G 298
++ ++F M +R+LV+WN+II G+ + ++ +L KM E
Sbjct: 449 LGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVS 508
Query: 299 FIPDVITVVTVLP 311
P+ IT++T+LP
Sbjct: 509 LKPNSITLMTILP 521
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 101/192 (52%), Gaps = 12/192 (6%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF- 187
D + L+ MYS G ++R+F ++ R+L WN +++G+ +E + D L +
Sbjct: 432 LDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLH 491
Query: 188 ---------VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVS 238
E +S LKP++ T ++ +C ++ + G +H A K L DV V
Sbjct: 492 KMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG 551
Query: 239 NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEG 298
+AL+ MY KC ++ K+F+ +P RN+++WN I+ + +G S ++ D+L MM +G
Sbjct: 552 SALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMM--VQG 609
Query: 299 FIPDVITVVTVL 310
P+ +T ++V
Sbjct: 610 VKPNEVTFISVF 621
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 7/212 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+A +D+++GK++H V + + L+ +Y CG +VFD + R
Sbjct: 99 LLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER 158
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA---DVGFG 219
N WN+L+S E + L F D +++P +FT V AC + G
Sbjct: 159 NQVSWNSLISSLCSFEKWEMALEAF-RCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMG 217
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
VH + G + + F+ N L+AMYGK + L R+LV+WN+++ +N
Sbjct: 218 KQVHAYGLRKGEL-NSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQN 276
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ + L +M+ EG PD T+ +VLP
Sbjct: 277 EQFLEALEYLREMV--LEGVEPDGFTISSVLP 306
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 10/147 (6%)
Query: 167 WNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMA 226
W L+ ++ L + + ++++ +KPDNF FP ++KA + D+ G +H
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIV-LGIKPDNFAFPALLKAVADLQDMDLGKQIHAHV 119
Query: 227 AKMGL-IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII---CGFSENGFS 282
K G + V V+N L+ +Y KC + K+F+ + ERN VSWNS+I C F + +
Sbjct: 120 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 179
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTV 309
E+F ++ +E P T+V+V
Sbjct: 180 LEAFRCML-----DEDVEPSSFTLVSV 201
>gi|90657651|gb|ABD96949.1| hypothetical protein [Cleome spinosa]
Length = 639
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 123/267 (46%), Gaps = 39/267 (14%)
Query: 78 KSLNKALSLLQENLHNADLK--EATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFI 134
+ A+++ + ++LK EAT V L AC ++ E+G+ +H V A + +
Sbjct: 194 RKFEDAIAVFRRMRRESNLKADEATVVSTLSACSVLRNQEVGEEIHRYVDAELEMTTK-- 251
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKN----------------- 177
I L+ MY CG +R +FD + +N+ W ++VSG+ N
Sbjct: 252 IGNALLDMYCKCGCVDKARAIFDEMGNKNVICWTSMVSGYASNGSLDEARELFERSPVRD 311
Query: 178 --------------ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L+ + L +F ++ L+PDNF ++K C + G +H
Sbjct: 312 IVLWTAMINGYVQFNLFDEALKLFRKMQIQ-RLRPDNFILVTLLKGCAQTGALEQGKWLH 370
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G + + D V AL+ +Y KC VE+ +++F M ER+ SW S+I G + NG +
Sbjct: 371 GYIHENSITLDRVVGTALVDVYAKCGCVEKALEVFYEMKERDTASWTSVIYGLAVNGMTS 430
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ D +M E GF PD IT + VL
Sbjct: 431 KALDFFSQME--EAGFRPDDITFIGVL 455
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 18/181 (9%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G++VH V S D + ++ MY G +++VFD + R++ WN L+S +
Sbjct: 135 GEKVHGYVVKS---GFDACVCNSVMGMYGALGKMEVAKKVFDEIPERDVVSWNVLISSYV 191
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG-------MAAK 228
+ + D +++F + ++ LK D T + AC + + G +H M K
Sbjct: 192 GHRKFEDAIAVFRRMRRESNLKADEATVVSTLSACSVLRNQEVGEEIHRYVDAELEMTTK 251
Query: 229 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
+G NAL+ MY KC V++ +F+ M +N++ W S++ G++ NG E+ +L
Sbjct: 252 IG--------NALLDMYCKCGCVDKARAIFDEMGNKNVICWTSMVSGYASNGSLDEAREL 303
Query: 289 L 289
Sbjct: 304 F 304
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 80/160 (50%), Gaps = 6/160 (3%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+ RV +++ L +N ++ K+E + VL +F EL L PDNFT P V KA G
Sbjct: 69 AERVLGFVQSPCLVMYNLMIKAVAKDENFRKVLVLFSELRKQG-LNPDNFTLPPVFKAMG 127
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
+ V G VHG K G D V N+++ MYG +E K+F+ +PER++VSWN
Sbjct: 128 CLGKVVEGEKVHGYVVKSGF--DACVCNSVMGMYGALGKMEVAKKVFDEIPERDVVSWNV 185
Query: 272 IICGF-SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+I + F E + + M E D TVV+ L
Sbjct: 186 LISSYVGHRKF--EDAIAVFRRMRRESNLKADEATVVSTL 223
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C +E GK +H + ++ + D ++ T L+ +Y+ CG + VF +K R
Sbjct: 353 LLKGCAQTGALEQGKWLHGYIHENS-ITLDRVVGTALVDVYAKCGCVEKALEVFYEMKER 411
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVG 217
+ W +++ G N + + L F ++ + +PD+ TF V+ AC GG+ + G
Sbjct: 412 DTASWTSVIYGLAVNGMTSKALDFFSQME-EAGFRPDDITFIGVLTACNHGGLVEEG 467
>gi|302760023|ref|XP_002963434.1| hypothetical protein SELMODRAFT_79700 [Selaginella moellendorffii]
gi|300168702|gb|EFJ35305.1| hypothetical protein SELMODRAFT_79700 [Selaginella moellendorffii]
Length = 575
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 106/213 (49%), Gaps = 9/213 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-- 160
+L AC ++ G+ VH V A S D + LI +Y CG ++R +FD L
Sbjct: 240 VLDACATVFALDAGRLVHRTV-ADAAVSLDARVVNMLIHLYGRCGALREARSLFDKLDER 298
Query: 161 ---TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
RNL WNA+V+ + +N L IF L + D FT+ + AC I D+
Sbjct: 299 NMPRRNLVSWNAMVTAYAENGRGKKALEIF-RLMDLEGTQADGFTYLGSLDACSTIPDLA 357
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
+G +H + GD V NAL+ +Y KC + + V LF MP + L +WN++I F+
Sbjct: 358 YGRLIHAEIRESRSSGDPKVGNALLNLYAKCGHLRDAVALFATMPMKILAAWNTMIGAFA 417
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ G E+ ++ + EG +PD I+ ++VL
Sbjct: 418 QTGHGKEAIEVFEHL--ALEGLLPDEISFISVL 448
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
T LI+ Y+ GF ++ +F L R+ W ALV+ + +N + F + D
Sbjct: 172 TALISGYAKNGFLEEAEAIFRKLPRRHFVAWTALVTAYAQNGQASKAFRTFQLMDLDGS- 230
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
+PD+ F V+ AC + + G VH A + D V N LI +YG+C + E
Sbjct: 231 QPDSIAFISVLDACATVFALDAGRLVHRTVADAAVSLDARVVNMLIHLYGRCGALREARS 290
Query: 257 LFEV-----MPERNLVSWNSIICGFSENGFSCESFDL--LIKMMGCE-EGF 299
LF+ MP RNLVSWN+++ ++ENG ++ ++ L+ + G + +GF
Sbjct: 291 LFDKLDERNMPRRNLVSWNAMVTAYAENGRGKKALEIFRLMDLEGTQADGF 341
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 43/208 (20%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LLQ CG+ + GKRVH + D ++ LI MY C + +VF+ + R
Sbjct: 77 LLQQCGNAGALAEGKRVHARI-LHLGLEADKLVANFLILMYGKCKSVDLATQVFERMPRR 135
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N + ++ ++ F AD G
Sbjct: 136 NDYSYSIMLQAF---------------------------------------ADCGQMRLA 156
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+ KM L D+ + ALI+ Y K F+EE +F +P R+ V+W +++ +++NG +
Sbjct: 157 REVFDKMPLQADISWT-ALISGYAKNGFLEEAEAIFRKLPRRHFVAWTALVTAYAQNGQA 215
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F ++M +G PD I ++VL
Sbjct: 216 SKAFRTF-QLMDL-DGSQPDSIAFISVL 241
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
+ D T+ +++ CG + G VH +GL D V+N LI MYGKC V+ +
Sbjct: 68 RADINTYASLLQQCGNAGALAEGKRVHARILHLGLEADKLVANFLILMYGKCKSVDLATQ 127
Query: 257 LFEVMPERNLVSWNSIICGFSENG---FSCESFD 287
+FE MP RN S++ ++ F++ G + E FD
Sbjct: 128 VFERMPRRNDYSYSIMLQAFADCGQMRLAREVFD 161
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C ++++ G +H S FI N +ITMYS ++ + F ++ +
Sbjct: 208 VLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNV-IITMYSELNLIQEAEKAFRLIEEK 266
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN L++ + + + L +F ++ +T ++PD+FTF + AC G+A + G +
Sbjct: 267 DVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQI 326
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + L D+ V NAL+ MY KC + +F M NLVSWN+II GF +G
Sbjct: 327 HAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLG 386
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L +M G PD +T + +L
Sbjct: 387 ERAVELFEQMNA--SGIRPDSVTFIGLL 412
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 108/215 (50%), Gaps = 7/215 (3%)
Query: 96 LKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV 155
+ E LL C K + G +H V T +D ++ ++ MY+ CG +R+V
Sbjct: 2 ITETLSSLLHHCSKTKALRCGLSLHAAV-LKTGTQSDVFMSNHVLNMYAKCGHTTFARQV 60
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
FD + +NL W+A++SG+ + + ++L S L P+ + F VI AC ++
Sbjct: 61 FDEMFEKNLVSWSAMISGYDQ----AGEPQMAIDLYSQMFLVPNEYVFASVISACASLSA 116
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
V G +H + K G FVSN+LI+MY KC + + +F PE N VS+N++I G
Sbjct: 117 VTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITG 176
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F EN E K+M ++G IPD + VL
Sbjct: 177 FVENQ-QLERGLEFFKLMR-QQGLIPDRFAFMGVL 209
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 7/210 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFI--INTRLITMYSLCGFPLDSRRVFDSLK 160
++ AC + +G+++H S S +F + I ++ LI+MY C D+ VF +
Sbjct: 107 VISACASLSAVTLGQKIH---SRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTP 163
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
N +NAL++GF +N+ L F +L L PD F F V+ C ++ G+
Sbjct: 164 EPNCVSYNALITGFVENQQLERGLEFF-KLMRQQGLIPDRFAFMGVLGICTTTENLKRGA 222
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H K+ L F+ N +I MY + ++E K F ++ E++++SWN++I S
Sbjct: 223 ELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCD 282
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + K M E PD T + L
Sbjct: 283 DHAKGLRVF-KHMTEETNVRPDDFTFTSAL 311
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 96/173 (55%), Gaps = 3/173 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+I Y+ CG + +F + RN+ W A++SG+ +N Y LS+F+ + +TE++P
Sbjct: 154 MIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRP 213
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ T V+ AC + + G + A G +++VSNAL+ MY +C +++ +F
Sbjct: 214 NEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVF 273
Query: 259 -EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ RNL SWNS+I G + +G E+ +L KM+ EG PD +T V VL
Sbjct: 274 EEIDGRRNLCSWNSMIMGLAVHGRCDEAIELFYKML--REGAAPDDVTFVGVL 324
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 90/191 (47%), Gaps = 33/191 (17%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+ ++FD + +F +N L+ ++ + + S++ ++ P+ +F + AC
Sbjct: 35 AHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYTQMCLQG-CSPNEHSFTFLFSACA 93
Query: 212 GIAD-------------VGFGSGVHG------MAAKMGLIG------------DVFVSNA 240
++ GFG V M AK+GL+ DV N+
Sbjct: 94 SLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNS 153
Query: 241 LIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI 300
+IA Y +C +E ++LF +MP RN+ SW ++I G+++NG ++ + + MM E
Sbjct: 154 MIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFL-MMEEETEMR 212
Query: 301 PDVITVVTVLP 311
P+ +T+ +VLP
Sbjct: 213 PNEVTLASVLP 223
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 7/182 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-T 161
+L AC + +E+G+R+ + F N ++ N L+ MY+ CG + VF+ +
Sbjct: 221 VLPACANLGALEVGERIEVYARGNGYFKNLYVSNA-LLEMYARCGRIDKAWGVFEEIDGR 279
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFG 219
RNL WN+++ G + + + +F ++ + PD+ TF V+ AC GG+ G
Sbjct: 280 RNLCSWNSMIMGLAVHGRCDEAIELFYKMLREGA-APDDVTFVGVLLACTHGGMVVEG-Q 337
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSE 278
M + + ++ + G+ + E L MP E + V W +++ S
Sbjct: 338 HFFESMERDFSIAPKLEHYGCMVDLLGRAGELREAHDLILRMPMEPDSVVWGTLLGACSF 397
Query: 279 NG 280
+G
Sbjct: 398 HG 399
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 114/207 (55%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ AC + + G+++H S + F D IN LI++Y+ CG ++ F+ + +N
Sbjct: 571 ISACAGIRALRQGQQIHAQ-SYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKN 629
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WN+LVSG ++ + + L +FV + TE + + FT+ I A +A++ G +H
Sbjct: 630 NISWNSLVSGLAQSGYFEEALQVFVRMLR-TEAEVNMFTYGSAISAAASLANIKQGQQIH 688
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
M K G + VSN+LI++Y K + + + F M ERN++SWN++I G+S++G
Sbjct: 689 SMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGM 748
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M C G +P+ +T V VL
Sbjct: 749 EALRLFEEMKVC--GIMPNHVTFVGVL 773
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 107/194 (55%), Gaps = 2/194 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C + +G+++H V T F + + + LI MY+ G + R+ L
Sbjct: 469 ILRTCTSLGALYLGEQIHTHV-IKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPED 527
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W A+++G+ +++++++ L +F E+ ++ DN F I AC GI + G +
Sbjct: 528 DVVSWTAMIAGYVQHDMFSEALQLFEEMEYRG-IQFDNIGFASAISACAGIRALRQGQQI 586
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G D+ ++NALI++Y +C ++E FE + ++N +SWNS++ G +++G+
Sbjct: 587 HAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYF 646
Query: 283 CESFDLLIKMMGCE 296
E+ + ++M+ E
Sbjct: 647 EEALQVFVRMLRTE 660
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 100/197 (50%), Gaps = 4/197 (2%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
E+G+++H LV S ++ N L+ +YS + + R+F ++ +R+ +N+L+SG
Sbjct: 278 ELGEQLHCLVIKWGFHSETYVCNG-LVALYSRSRKLISAERIFSTMNSRDGVSYNSLISG 336
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
+ L +F ++ D LKPD T ++ AC + + G +H A K G+
Sbjct: 337 LVQQGFSDRALELFTKMQRDC-LKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSA 395
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
D+ + +L+ +Y KCA VE K F N+V WN ++ + + +SF++ +M
Sbjct: 396 DIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQ 455
Query: 294 GCEEGFIPDVITVVTVL 310
EG IP+ T ++L
Sbjct: 456 --MEGMIPNQFTYPSIL 470
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 4/211 (1%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
GVL G + K+VH + F + ++ LI +YS G+ +++VF+ +
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSR-TFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCI 221
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+++ W A++SG ++N L + + +F ++ + +E+ P + V+ A I G
Sbjct: 222 CMKDIVTWVAMISGLSQNGLEEEAILLFCDMHA-SEIFPTPYVLSSVLSASTKIQLFELG 280
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H + K G + +V N L+A+Y + + ++F M R+ VS+NS+I G +
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
GFS + +L KM + PD ITV ++L
Sbjct: 341 GFSDRALELFTKMQ--RDCLKPDCITVASLL 369
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 93/190 (48%), Gaps = 2/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + G ++H + S D I+ L+ +YS C + + F +T
Sbjct: 368 LLSACASVGALHKGMQLHSH-AIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETE 426
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN ++ + + + +D IF ++ + + P+ FT+P +++ C + + G +
Sbjct: 427 NIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI-PNQFTYPSILRTCTSLGALYLGEQI 485
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G +V+V + LI MY K + +++ +PE ++VSW ++I G+ ++
Sbjct: 486 HTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMF 545
Query: 283 CESFDLLIKM 292
E+ L +M
Sbjct: 546 SEALQLFEEM 555
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 5/207 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C + R+H +S S F + ++ L+ Y G + +VFD R
Sbjct: 64 LLEGCLTSGSLFETMRLHCRISKSG-FDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNR 122
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG--S 220
++F WN ++ F + V +F + ++ + P+ +TF V+KAC G D+ F
Sbjct: 123 SVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEG-ITPNGYTFAGVLKACVG-GDIAFNYVK 180
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH G V+N LI +Y K ++E K+F + +++V+W ++I G S+NG
Sbjct: 181 QVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNG 240
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVV 307
E+ L M E P V++ V
Sbjct: 241 LEEEAILLFCDMHASEIFPTPYVLSSV 267
>gi|357481223|ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512232|gb|AES93855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 774
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 111/224 (49%), Gaps = 15/224 (6%)
Query: 79 SLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINT 137
+L KALSL+ N + + L AC +K I+ G +H +++ + ND +
Sbjct: 62 NLEKALSLVYTN--PSLTLQDYAFLFHACAQKKYIKQGMALHHYILNKHPKIQNDIFLTN 119
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L+ MY CG +R +FD + RN W LVSG+ + L + ++F + + +
Sbjct: 120 NLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSGMLAC--FR 177
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA-------- 249
P+ F F V+ AC DV +G VH A KM L V+V+NALI MY KC+
Sbjct: 178 PNEFAFASVLCACEE-QDVKYGLQVHAAALKMSLDFSVYVANALITMYSKCSGGFGGSCD 236
Query: 250 -FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
++ +F+ M RNL+SWNS+I GF G ++ L M
Sbjct: 237 QTTDDAWMVFKSMEYRNLISWNSMISGFQFRGLGDKAIGLFAHM 280
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 137 TRLITMYS-LCGFPLDSRRVF-DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
T L+ Y+ L G D ++F D+ ++ W A++S F + + L +F +L +
Sbjct: 338 TALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIISVFAERDPEQAFL-LFCQLHREN 396
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
D TF +KAC + VH K G D VSNALI YG+ +
Sbjct: 397 -FVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALS 455
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++F M +LVSWNS++ ++ +G + ++ DL +M PD T V +L
Sbjct: 456 EQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQM-----DVHPDSATFVALLA 507
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
D+F++N L+ MY KC ++ LF+ MP RN VSW ++ G+++ G E F L M+
Sbjct: 114 DIFLTNNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSGML 173
Query: 294 GCEEGFIPDVITVVTVL 310
C F P+ +VL
Sbjct: 174 AC---FRPNEFAFASVL 187
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 85/186 (45%), Gaps = 7/186 (3%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
+ + L+AC + + VH V F ND +++ LI Y G S +VF
Sbjct: 401 RHTFSIALKACAYFVTEKNATEVHSQV-MKQGFHNDTVVSNALIHAYGRSGSLALSEQVF 459
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
+ +L WN+++ + + D L +F ++ ++ PD+ TF ++ AC V
Sbjct: 460 TEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQM----DVHPDSATFVALLAACSHAGLV 515
Query: 217 GFGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIIC 274
G+ + + M G+ + + ++ +YG+ + E +L MP + + V W+S++
Sbjct: 516 EEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLG 575
Query: 275 GFSENG 280
++G
Sbjct: 576 SCRKHG 581
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 105/197 (53%), Gaps = 9/197 (4%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
GK +H + F NT LI MYS G +R VFD ++ RN W+ ++SG+
Sbjct: 113 GKALHAFCIVGSVNLGIFQTNT-LINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYV 171
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC---GGIADVGFGSGVHGMAAKMGLI 232
+ LY + + +F ++ ++P+ F +I AC G +AD GF VHG K G++
Sbjct: 172 RVGLYEEAVGLFCQMWG-LGVEPNGFMVASLITACSRSGYMADEGFQ--VHGFVVKTGIL 228
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
GDV+V AL+ YG V KLFE MP+ N+VSW S++ G+S++G E ++ +M
Sbjct: 229 GDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRM 288
Query: 293 MGCEEGFIPDVITVVTV 309
+EG + T TV
Sbjct: 289 R--QEGVSGNQNTFATV 303
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 123/240 (51%), Gaps = 12/240 (5%)
Query: 75 EESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDI-EIGKRVHELVSASTQFSNDF 133
EE KA L++E A+ VL AC D+ + G +H + + S+D+
Sbjct: 579 EEPNEAVKAYKLIREKGIPANYITMVSVL-GACSAPDDLLKHGMPIHAHIVLTGFESDDY 637
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
+ N+ LITMY+ CG S +FD L ++ WNA+V+ + + L IF E+ +
Sbjct: 638 VKNS-LITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMR-N 695
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+ D F+F + A +A + G +HG+ K+G D+ V+NA + MYGKC + +
Sbjct: 696 VGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHD 755
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGF---SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++K+ R+ +SWN +I F+ +G + E+F ++K+ G PD +T V++L
Sbjct: 756 VLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKL-----GPKPDHVTFVSLL 810
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 104/201 (51%), Gaps = 8/201 (3%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
+++ G+ +H LV SN I NT L+T+YS G D+ VF ++ R+L WN+++
Sbjct: 413 NLKWGRGIHGLVVKLGLDSNVCICNT-LLTLYSEAGRSEDAELVFQAMTERDLISWNSMM 471
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
+ + ++ D L I EL ++ ++ TF + AC + VH + G
Sbjct: 472 ACYVQDGKCLDGLKILAELLQMGKVM-NHVTFASALAACSNPECLIESKIVHALIIVAGF 530
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL--L 289
+ V NAL+ MYGK + E K+ + MP+ + V+WN++I G +EN E+ L
Sbjct: 531 HDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKL 590
Query: 290 IKMMGCEEGFIPDVITVVTVL 310
I+ E+G + IT+V+VL
Sbjct: 591 IR----EKGIPANYITMVSVL 607
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 93/185 (50%), Gaps = 3/185 (1%)
Query: 103 LLQACGHEKDI-EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
L+ AC + + G +VH V T D + T L+ Y G +++++F+ +
Sbjct: 201 LITACSRSGYMADEGFQVHGFV-VKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPD 259
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
N+ W +L+ G++ + +VL+++ + + N TF V +CG + D G
Sbjct: 260 HNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQN-TFATVTSSCGLLEDQVLGYQ 318
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
V G + G V V+N+LI+M+ + VEE +F+ M E +++SWN++I ++ +G
Sbjct: 319 VLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGL 378
Query: 282 SCESF 286
ES
Sbjct: 379 CRESL 383
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 104/205 (50%), Gaps = 4/205 (1%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
+CG +D +G +V + F + + LI+M+S ++ VFD + ++
Sbjct: 306 SCGLLEDQVLGYQVLGHI-IQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDII 364
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
WNA++S + + L + L F + ++ T ++ C + ++ +G G+HG+
Sbjct: 365 SWNAMISAYAHHGLCRESLRCF-HWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGL 423
Query: 226 AAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCES 285
K+GL +V + N L+ +Y + E+ +F+ M ER+L+SWNS++ + ++G +
Sbjct: 424 VVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDG 483
Query: 286 FDLLIKMMGCEEGFIPDVITVVTVL 310
+L +++ + G + + +T + L
Sbjct: 484 LKILAELL--QMGKVMNHVTFASAL 506
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 6/164 (3%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E G+++H LV F +D + + MY CG D ++ R+ WN L+S
Sbjct: 718 LEEGQQLHGLV-IKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILIS 776
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMG 230
F ++ + F E+ KPD+ TF ++ AC GG+ D G M + G
Sbjct: 777 AFARHGCFQKARETFHEMLK-LGPKPDHVTFVSLLSACNHGGLVDEGLAY-YDSMTREFG 834
Query: 231 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
+ + +I + G+ + + MP N ++W S++
Sbjct: 835 VFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLL 878
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 114/207 (55%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ AC + + G+++H S + F D IN LI++Y+ CG ++ F+ + +N
Sbjct: 571 ISACAGIRALRQGQQIHAQ-SYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKN 629
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
WN+LVSG ++ + + L +FV + TE + + FT+ I A +A++ G +H
Sbjct: 630 NISWNSLVSGLAQSGYFEEALQVFVRMLR-TEAEVNMFTYGSAISAAASLANIKQGQQIH 688
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
M K G + VSN+LI++Y K + + + F M ERN++SWN++I G+S++G
Sbjct: 689 SMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGM 748
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M C G +P+ +T V VL
Sbjct: 749 EALRLFEEMKVC--GIMPNHVTFVGVL 773
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 107/194 (55%), Gaps = 2/194 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C + +G+++H V T F + + + LI MY+ G + R+ L
Sbjct: 469 ILRTCTSLGALYLGEQIHTHV-IKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPED 527
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W A+++G+ +++++++ L +F E+ ++ DN F I AC GI + G +
Sbjct: 528 DVVSWTAMIAGYVQHDMFSEALQLFEEMEYRG-IQFDNIGFASAISACAGIRALRQGQQI 586
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + G D+ ++NALI++Y +C ++E FE + ++N +SWNS++ G +++G+
Sbjct: 587 HAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYF 646
Query: 283 CESFDLLIKMMGCE 296
E+ + ++M+ E
Sbjct: 647 EEALQVFVRMLRTE 660
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 100/197 (50%), Gaps = 4/197 (2%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
E+G+++H LV S ++ N L+ +YS + + R+F ++ +R+ +N+L+SG
Sbjct: 278 ELGEQLHCLVIKWGFHSETYVCNG-LVALYSRSRKLISAERIFSTMNSRDGVSYNSLISG 336
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
+ L +F ++ D LKPD T ++ AC + + G +H A K G+
Sbjct: 337 LVQQGFSDRALELFTKMQRDC-LKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSA 395
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
D+ + +L+ +Y KCA VE K F N+V WN ++ + + +SF++ +M
Sbjct: 396 DIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQ 455
Query: 294 GCEEGFIPDVITVVTVL 310
EG IP+ T ++L
Sbjct: 456 --MEGMIPNQFTYPSIL 470
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 4/211 (1%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
GVL G + K+VH + F + ++ LI +YS G+ +++VF+ +
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSR-TFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCI 221
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+++ W A++SG ++N L + + +F ++ + +E+ P + V+ A I G
Sbjct: 222 CMKDIVTWVAMISGLSQNGLEEEAILLFCDMHA-SEIFPTPYVLSSVLSASTKIQLFELG 280
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H + K G + +V N L+A+Y + + ++F M R+ VS+NS+I G +
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
GFS + +L KM + PD ITV ++L
Sbjct: 341 GFSDRALELFTKMQ--RDCLKPDCITVASLL 369
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 94/190 (49%), Gaps = 2/190 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + G ++H + S D I+ L+ +YS C + + F + +T
Sbjct: 368 LLSACASVGALHKGMQLHSH-AIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETE 426
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN ++ + + + +D IF ++ + + P+ FT+P +++ C + + G +
Sbjct: 427 NIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI-PNQFTYPSILRTCTSLGALYLGEQI 485
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G +V+V + LI MY K + +++ +PE ++VSW ++I G+ ++
Sbjct: 486 HTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMF 545
Query: 283 CESFDLLIKM 292
E+ L +M
Sbjct: 546 SEALQLFEEM 555
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 5/207 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C + R+H +S S F + ++ L+ Y G + +VFD R
Sbjct: 64 LLEGCLTSGSLFETMRLHCRISKSG-FDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNR 122
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG--S 220
++F WN ++ F + V +F + ++ + P+ +TF V+KAC G D+ F
Sbjct: 123 SVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEG-ITPNGYTFAGVLKACVG-GDIAFNYVK 180
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH G V+N LI +Y K ++E K+F + +++V+W ++I G S+NG
Sbjct: 181 QVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNG 240
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVV 307
E+ L M E P V++ V
Sbjct: 241 LEEEAILLFCDMHASEIFPTPYVLSSV 267
>gi|302142722|emb|CBI19925.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 123/245 (50%), Gaps = 19/245 (7%)
Query: 81 NKALSLLQ--ENLHNADLKEATGV---LLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
N+AL L+ N+ ++E +L AC I+ G +VH V F+ND II
Sbjct: 320 NEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHV-YKVGFTNDIII 378
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRN----------LFQWNALVSGFTKNELYTDVLS 185
++ L+ MYS C P D+ ++F L+ + L WN+++ GF++N + L
Sbjct: 379 DSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVLISWNSMIVGFSQNACPIEALD 438
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
+F E++ L+ D F+ VI AC I+ + G + A +GL D +S +L+ Y
Sbjct: 439 LFCEMNK-LGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFY 497
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
KC VE KLF+ M + + V WNS++ G++ NG E+ ++ +M G P IT
Sbjct: 498 CKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSV--GVQPTDIT 555
Query: 306 VVTVL 310
V VL
Sbjct: 556 FVGVL 560
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 19/200 (9%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L CG DI+ V L+ FS + LI+ Y+ CG D+RR+F
Sbjct: 253 LYGKCG---DIDSANHVLNLMKEPDAFSL-----SALISGYASCGRMNDARRIFCLKSNA 304
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN+++SG+ N + L +F + ++ D TF V+ AC + + G V
Sbjct: 305 CVVLWNSMISGYVANNEALEALELFNNMRRKG-VQEDYSTFASVLSACSTLGIIDQGIQV 363
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN----------LVSWNSI 272
H K+G D+ + +AL+ MY KC ++ KLF + + L+SWNS+
Sbjct: 364 HAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVLISWNSM 423
Query: 273 ICGFSENGFSCESFDLLIKM 292
I GFS+N E+ DL +M
Sbjct: 424 IVGFSQNACPIEALDLFCEM 443
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 87/208 (41%), Gaps = 41/208 (19%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L +C + I G+ +H L S + I RL+ MYS C +++++F+ + RN
Sbjct: 49 LGSCNNYGSIYRGRLLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEEMPKRN 108
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
F WN ++ G+ K+ L +F D+ D F++
Sbjct: 109 CFSWNTMIEGYLKSGSKGKSLELF-----DSMPHKDAFSW-------------------- 143
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
N +I+ + K +E +LF MP +N ++WNS+I G++ NG
Sbjct: 144 ---------------NVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPK 188
Query: 284 ESFDLLIKM-MGCEEGFIPDVITVVTVL 310
E+ L + + E F D + TV+
Sbjct: 189 EAVGLFKDLSLNPLERFCGDTFVLATVV 216
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD--TELKPDNFTFPCVIKA 209
+RR+F+ + +N WN+++ G+ N + + +F +LS + D F V+ A
Sbjct: 159 ARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGA 218
Query: 210 CGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSW 269
C + + G +H + D + ++L+ +YGKC ++ + +M E + S
Sbjct: 219 CTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSL 278
Query: 270 NSIICGFSENG 280
+++I G++ G
Sbjct: 279 SALISGYASCG 289
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E K HE+ + F N ++ Y+ G +F+ + RN+F WNAL+
Sbjct: 92 VEARKLFHEMPNRDVMFWNT------VLKGYATNGNVEALEGLFEEMPERNIFSWNALIG 145
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G+ N L+ +VL F + S++++ P++ T V+ AC + + G VH A GL
Sbjct: 146 GYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLK 205
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
G+V+V NAL+ MY KC +E + +F M ++L+SWN++I G + + ++ +L +M
Sbjct: 206 GNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQM 265
Query: 293 MGCEEGFIPDVITVVTVL 310
G PD IT + +L
Sbjct: 266 KNA--GQKPDGITFIGIL 281
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 27/247 (10%)
Query: 36 NKHSLRSIFKE---KSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLH 92
N +L +F+E ++ S +A + GL F + L + L
Sbjct: 121 NVEALEGLFEEMPERNIFSWNALIGGYAHNGLFF---------------EVLGSFKRMLS 165
Query: 93 NADL--KEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFP 149
+D+ +AT V +L AC +++GK VH +S N ++ N L+ MY+ CG
Sbjct: 166 ESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNA-LMDMYAKCGII 224
Query: 150 LDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKA 209
++ VF + T++L WN L+ G + D L++F ++ + + KPD TF ++ A
Sbjct: 225 ENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQ-KPDGITFIGILCA 283
Query: 210 CG--GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNL 266
C G+ + GF MA ++ + ++ M + +E+ + MP E +
Sbjct: 284 CTHMGLVEDGFAY-FQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADG 342
Query: 267 VSWNSII 273
V W ++
Sbjct: 343 VIWAGLL 349
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 66/129 (51%), Gaps = 12/129 (9%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+R++FD + N+ WN++ G+ ++E Y + IF E+ + + + +I
Sbjct: 4 ARQLFDQIPDPNIALWNSMFRGYAQSESYRE---IFCEM-----FERNVVAWTSMINGYI 55
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
AD+ + +A + DV + N +++ Y + + E KLF MP R+++ WN+
Sbjct: 56 LSADLVSARRLFDLAPER----DVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNT 111
Query: 272 IICGFSENG 280
++ G++ NG
Sbjct: 112 VLKGYATNG 120
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL +C + GK +H + F ++ T L+ MY CG + VF+ + +
Sbjct: 317 LLPSCSQSGALLEGKSIHGF-AIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEK 375
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN +V+ + +NE Y + L +F + ++ LKPD T V+ A +A G +
Sbjct: 376 NMVSWNTMVAAYVQNEQYKEALKMFQHILNEP-LKPDAITIASVLPAVAELASRSEGKQI 434
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K+GL + F+SNA++ MY KC ++ + F+ M +++VSWN++I ++ +GF
Sbjct: 435 HSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFG 494
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
S +M G +GF P+ T V++L
Sbjct: 495 RTSIQFFSEMRG--KGFKPNGSTFVSLL 520
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 83/142 (58%), Gaps = 6/142 (4%)
Query: 144 SLCGFPL-----DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LCGF ++ +F+ + + F WN ++ G+T N L+ + + + + + ++
Sbjct: 64 DLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEG-IRS 122
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
DNFTFP VIKACG + + G VHG K+G DV+V N LI MY K F+E K+F
Sbjct: 123 DNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVF 182
Query: 259 EVMPERNLVSWNSIICGFSENG 280
+ MP R+LVSWNS++ G+ +G
Sbjct: 183 DEMPVRDLVSWNSMVSGYQIDG 204
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 19/208 (9%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC E + G +H V S + D ++ T LI MY CG + RVF+ + ++N
Sbjct: 232 LGACSIEHCLRSGMEIHCQVIRS-ELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKN 290
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WNA++ G + D ++ PD T ++ +C + G +H
Sbjct: 291 IVAWNAMIGG----------------MQEDDKVIPDVITMINLLPSCSQSGALLEGKSIH 334
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G A + + + + AL+ MYGKC ++ +F M E+N+VSWN+++ + +N
Sbjct: 335 GFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYK 394
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ + ++ E PD IT+ +VLP
Sbjct: 395 EALKMFQHIL--NEPLKPDAITIASVLP 420
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+++ACG + +G++VH +L+ F D + LI MY GF + +VFD +
Sbjct: 130 VIKACGELLALMVGQKVHGKLIKIG--FDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPV 187
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL--KPDNFTFPCVIKACGGIADVGFG 219
R+L WN++VSG+ ++ D LS + L K D F + AC + G
Sbjct: 188 RDLVSWNSMVSGY---QIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSG 244
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H + L D+ V +LI MYGKC V+ ++F + +N+V+WN++I G E
Sbjct: 245 MEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQE- 303
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ IPDVIT++ +LP
Sbjct: 304 ----------------DDKVIPDVITMINLLP 319
>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 127/266 (47%), Gaps = 40/266 (15%)
Query: 81 NKALSLLQ--ENLHNADLKEATGV---LLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
N+AL L+ N+ ++E +L AC I+ G +VH V F+ND II
Sbjct: 284 NEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHV-YKVGFTNDIII 342
Query: 136 NTRLITMYSLCGFPLDS-------------------------------RRVFDSLKTRNL 164
++ L+ MYS C P D+ R++FD++ +++L
Sbjct: 343 DSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSL 402
Query: 165 FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHG 224
WN+++ GF++N + L +F E++ L+ D F+ VI AC I+ + G +
Sbjct: 403 ISWNSMIVGFSQNACPIEALDLFCEMNK-LGLRMDKFSLAGVISACASISSLELGEQIFA 461
Query: 225 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCE 284
A +GL D +S +L+ Y KC VE KLF+ M + + V WNS++ G++ NG E
Sbjct: 462 RATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIE 521
Query: 285 SFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ +M G P IT V VL
Sbjct: 522 ALNVFDQMRSV--GVQPTDITFVGVL 545
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 112/213 (52%), Gaps = 14/213 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ C + +D+E G+++ L SN I+++ I ++S C DS RVF+ +
Sbjct: 947 VITVCSNLQDLEKGEQIFALCIRVGFLSNS-IVSSASIDLFSKCNRLEDSVRVFEEI--- 1002
Query: 163 NLFQW-----NALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
+QW NA++S + + + L +FV L+ L+P FT V+ A + V
Sbjct: 1003 --YQWDSVLCNAMISSYAWHGFGENALQLFV-LTLRENLRPTEFTLSIVLSAVSILLPVD 1059
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
GS +H + K GL DV V+++L+ MY K ++ +K F + R+L+SWN++I G +
Sbjct: 1060 QGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLA 1119
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
NG ++ ++ +++ G PD IT+ VL
Sbjct: 1120 YNGRVSKALEIFKELL--IGGPPPDEITLAGVL 1150
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 98/221 (44%), Gaps = 40/221 (18%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L CG DI+ V L+ FS + LI+ Y+ CG D+RR+F
Sbjct: 217 LYGKCG---DIDSANHVLNLMKEPDAFSL-----SALISGYASCGRMNDARRIFCLKSNX 268
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN+++SG+ N + L +F + ++ D TF V+ AC + + G V
Sbjct: 269 CVVLWNSMISGYVANNEALEALELFNNMRRKG-VQEDYSTFASVLSACSTLGIIDQGIQV 327
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGK-------------------------------CAFV 251
H K+G D+ + +AL+ MY K C +
Sbjct: 328 HAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRI 387
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
++ ++F+ MP ++L+SWNS+I GFS+N E+ DL +M
Sbjct: 388 DDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEM 428
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 81/160 (50%), Gaps = 7/160 (4%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+R VFD + R++ WN ++SG+ L+ D F E+ ++P FT+ ++
Sbjct: 795 ARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQK-AGIRPSGFTYSTLLSF-- 851
Query: 212 GIADVGFGSGVHGMAAKMGL-IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
++ G +H + G+ + +V V N+LI MYGK V+ +F M E +++SWN
Sbjct: 852 -VSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWN 910
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S+I ++G+ + + M G+ PD TV TV+
Sbjct: 911 SLIWSCGKSGYQNLALRQFVLMRSV--GYSPDQFTVSTVI 948
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 5/196 (2%)
Query: 116 GKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
GK++H ++ SN ++ LI MY G + VF +++ ++ WN+L+
Sbjct: 858 GKQIHASMIRNGVDLSN-VVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSLIWSC 916
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
K+ L FV + S PD FT VI C + D+ G + + ++G + +
Sbjct: 917 GKSGYQNLALRQFVLMRS-VGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSN 975
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
VS+A I ++ KC +E+ V++FE + + + V N++I ++ +GF + L + +
Sbjct: 976 SIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFV--LT 1033
Query: 295 CEEGFIPDVITVVTVL 310
E P T+ VL
Sbjct: 1034 LRENLRPTEFTLSIVL 1049
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 87/208 (41%), Gaps = 41/208 (19%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L +C + I G+ +H L S + I RL+ MYS C +++++F+ + RN
Sbjct: 13 LGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEEMPKRN 72
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
F WN ++ G+ K+ L +F D+ D F++
Sbjct: 73 CFSWNTMIEGYLKSGSKGKSLELF-----DSMPHKDAFSW-------------------- 107
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
N +I+ + K +E +LF MP +N ++WNS+I G++ NG
Sbjct: 108 ---------------NVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPK 152
Query: 284 ESFDLLIKM-MGCEEGFIPDVITVVTVL 310
E+ L + + E F D + TV+
Sbjct: 153 EAVGLFKDLSLNPLERFCGDTFVLATVV 180
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 65/135 (48%), Gaps = 10/135 (7%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP------DNFTFPC 205
+RR+F+ + +N WN+++ G+ N + + +F +LS L P D F
Sbjct: 123 ARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLS----LNPLERFCGDTFVLAT 178
Query: 206 VIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 265
V+ AC + + G +H + D + ++L+ +YGKC ++ + +M E +
Sbjct: 179 VVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPD 238
Query: 266 LVSWNSIICGFSENG 280
S +++I G++ G
Sbjct: 239 AFSLSALISGYASCG 253
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L C ++++ G +H S FI N +ITMYS ++ + F ++ +
Sbjct: 208 VLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNV-IITMYSELNLIQEAEKAFRLIEEK 266
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN L++ + + + L +F ++ +T ++PD+FTF + AC G+A + G +
Sbjct: 267 DVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQI 326
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + L D+ V NAL+ MY KC + +F M NLVSWN+II GF +G
Sbjct: 327 HAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLG 386
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +L +M G PD +T + +L
Sbjct: 387 ERAVELFEQMNA--SGIRPDSVTFIGLL 412
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 108/215 (50%), Gaps = 7/215 (3%)
Query: 96 LKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRV 155
+ E LL C K + G +H V T +D ++ ++ MY+ CG +R+V
Sbjct: 2 ITETLSSLLHHCSKTKALRCGLSLHAAV-LKTGTQSDVFMSNHVLNMYAKCGHTTFARQV 60
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
FD + +NL W+A++SG+ + + ++L S L P+ + F VI AC ++
Sbjct: 61 FDEMFEKNLVSWSAMISGYDQ----AGEPQMAIDLYSQMFLVPNEYVFASVISACASLSA 116
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
V G +H + K G FVSN+LI+MY KC + + +F PE N VS+N++I G
Sbjct: 117 VTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITG 176
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F EN E K+M ++G IPD + VL
Sbjct: 177 FVENQ-QLERGLEFFKLMR-QQGLIPDRFAFMGVL 209
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 7/210 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFI--INTRLITMYSLCGFPLDSRRVFDSLK 160
++ AC + +G+++H S S +F + I ++ LI+MY C D+ VF +
Sbjct: 107 VISACASLSAVTLGQKIH---SRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTP 163
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
N +NAL++GF +N+ L F +L L PD F F V+ C ++ G+
Sbjct: 164 EPNCVSYNALITGFVENQQLERGLEFF-KLMRQQGLIPDRFAFMGVLGICTTTENLKRGA 222
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H K+ L F+ N +I MY + ++E K F ++ E++++SWN++I S
Sbjct: 223 ELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCD 282
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + K M E PD T + L
Sbjct: 283 DHAKGLRVF-KHMTEETNVRPDDFTFTSAL 311
>gi|225453406|ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
[Vitis vinifera]
gi|297734603|emb|CBI16654.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
T +I YS G +R +FD++ +NLF WNA++SG+ +N+ + L +F E+ S T L
Sbjct: 220 TIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYRQNKQPYEALKLFHEMQSTTSL 279
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
+PD T V+ A + + G VH + L V ALI MY KC + +
Sbjct: 280 EPDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRG 339
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ MPE+ SWN++I F+ NG + E+ L ++M +GF+P+ IT++ VL
Sbjct: 340 VFDNMPEKETASWNALINAFAINGRAKEALGLFMEM--NHKGFMPNEITMIGVL 391
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 11/210 (5%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
VL ++C I G+ +H V A F D T L+ MY+ G +R++FD +
Sbjct: 93 VLAKSCALNMAIWEGQEIHSHVVA-VGFCLDLYAATALVDMYAKFGKMDCARKLFDEMID 151
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R+ W AL+ G+ ++ + +F D ++ D+ F +I A + D+
Sbjct: 152 RSQVSWTALIGGYVRSGDMDNAGKLF-----DQMIEKDSAAFNTMIDAYVKLGDMCSARK 206
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+ + ++ +I Y ++ LF+ MPE+NL SWN++I G+ +N
Sbjct: 207 LFDEMPERSVVSWTI----MIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYRQNKQ 262
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ L +M PD +T+V+VLP
Sbjct: 263 PYEALKLFHEMQST-TSLEPDEVTIVSVLP 291
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 74/143 (51%), Gaps = 1/143 (0%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRN-LFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L +Y + +RR+FD R+ F N+++ + Y++ +++ +L +T
Sbjct: 26 LAPLYDPLAGIVHARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSESFALYRDLRRNTSFT 85
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
PD+FTF + K+C + G +H +G D++ + AL+ MY K ++ KL
Sbjct: 86 PDSFTFSVLAKSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKL 145
Query: 258 FEVMPERNLVSWNSIICGFSENG 280
F+ M +R+ VSW ++I G+ +G
Sbjct: 146 FDEMIDRSQVSWTALIGGYVRSG 168
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 9/231 (3%)
Query: 75 EESKSLNKALSLLQENLHNADLK--EATGV-LLQACGHEKDIEIGKRVHELVSASTQFSN 131
++K +AL L E L+ E T V +L A +++G VH V +
Sbjct: 258 RQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGWVHRFVR-RKKLDR 316
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
+ T LI MY+ CG + SR VFD++ + WNAL++ F N + L +F+E++
Sbjct: 317 ATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGRAKEALGLFMEMN 376
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
P+ T V+ AC V G + GL + ++ + G+ +
Sbjct: 377 HKG-FMPNEITMIGVLSACNHSGLVEEGKRWFKAMEEFGLTPKIEHYGCMVDLLGRAGCL 435
Query: 252 EEMVKLFEVMP-ERNLVSWNSII--CGFSENGFSCES-FDLLIKMMGCEEG 298
+E KL E MP E N + +S + CG+S++ E IKM +G
Sbjct: 436 QEAEKLMESMPYEANGIILSSFLFACGYSKDVARAERVLKEAIKMEAWNDG 486
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 102/191 (53%), Gaps = 2/191 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC ++ + GK VH V T + D + L+ +Y+ CG D+ R F +
Sbjct: 153 VLKACLGLQNFDAGKTVHCSV-LKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKN 211
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+ ++S F ++ L IF ++ + P+ FTF V++A I + +
Sbjct: 212 DVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVI-PNQFTFSSVLQASADIESLDLSKTI 270
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A K GL DVFVSNAL+A Y KC +E+ ++LFE + +RN VSWN+II + + G
Sbjct: 271 HGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDG 330
Query: 283 CESFDLLIKMM 293
+ L M+
Sbjct: 331 ERALSLFSNML 341
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 8/210 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQA + +++ K +H + S D ++ L+ Y+ CG S +F++L R
Sbjct: 254 VLQASADIESLDLSKTIHGH-ALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDR 312
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WN ++ + + LS+F + +++ T+ +++AC +A + G V
Sbjct: 313 NDVSWNTIIVSYVQLGDGERALSLFSNMLR-YQVQATEVTYSSILRACATLAALELGLQV 371
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H + AK DV V NALI MY KC +++ +F+++ R+ VSWN+IICG+S +G
Sbjct: 372 HCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLG 431
Query: 283 CESFDL--LIKMMGCEEGFIPDVITVVTVL 310
E+ + L+K C+ PD +T V VL
Sbjct: 432 VEAIKMFNLMKETKCK----PDELTFVGVL 457
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 106/198 (53%), Gaps = 6/198 (3%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
E+G+ VH V SN FI T LI YS+ G +R VFD + ++++ W +++
Sbjct: 63 ELGRIVHGCVLKVGYGSNTFI-GTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
+ +N+ +++ L F ++ KP+NFTF V+KAC G+ + G VH K
Sbjct: 122 YAENDCFSEALEFFSQMRV-AGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
D++V L+ +Y +C ++ + F MP+ +++ W+ +I F+++G S ++ ++ +M
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQM- 239
Query: 294 GCEEGF-IPDVITVVTVL 310
F IP+ T +VL
Sbjct: 240 --RRAFVIPNQFTFSSVL 255
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 6/196 (3%)
Query: 82 KALSLLQENL-HNADLKEAT-GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRL 139
+ALSL L + E T +L+AC +E+G +VH L +A T + D + L
Sbjct: 332 RALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCL-TAKTIYGQDVAVGNAL 390
Query: 140 ITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPD 199
I MY+ CG D+R +FD L R+ WNA++ G++ + L + + +F L +T+ KPD
Sbjct: 391 IDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMF-NLMKETKCKPD 449
Query: 200 NFTFPCVIKACGGIADVGFGSGVH-GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
TF V+ AC + G M G+ + ++ + G+ +++ VK
Sbjct: 450 ELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFI 509
Query: 259 EVMP-ERNLVSWNSII 273
E +P E +++ W +++
Sbjct: 510 EDIPFEPSVMIWRALL 525
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT-ELKPDNFTFPCVIKACGGI 213
VFD + RN + L+ G+ ++ + + +F L + EL P F F V+K +
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNP--FVFTTVLKLLVSM 59
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
G VHG K+G + F+ ALI Y V ++F+ + +++VSW +I
Sbjct: 60 EWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMI 119
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++EN E+ + +M GF P+ T VL
Sbjct: 120 ASYAENDCFSEALEFFSQMR--VAGFKPNNFTFAGVL 154
>gi|255536747|ref|XP_002509440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549339|gb|EEF50827.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 678
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 90 NLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFP 149
N H+ + + LL C K GK +H V S D I LI +YS C F
Sbjct: 99 NFHSTPISISYSNLLFQCTASKASTPGKEIHARV-IKLGLSQDPKIRNLLINLYSKCQFF 157
Query: 150 LDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL------------------- 190
+R++ D +L W+AL+SG+++N + +S F E+
Sbjct: 158 KYARKMVDESTEPDLVSWSALISGYSQNGFGKEAISAFYEMHLLGVKCNEFTFPSLLKAC 217
Query: 191 SSDTEL------------KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVS 238
+S T++ +P+ F+ C+I AC G+ D G +HG K+ D+F +
Sbjct: 218 TSTTDMWLGRQDMILSGIRPNEFSLSCMINACTGLEDSSQGRKIHGYLIKLAYDLDLFSA 277
Query: 239 NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEG 298
NAL+ MY K +EE +++FE + + ++VSWN+II G + + C + +L KM G
Sbjct: 278 NALVDMYAKVGTLEEAIRVFEEIAKPDIVSWNAIIAGCALREYHCWALELFGKMN--RSG 335
Query: 299 FIPDVITVVTVL 310
P++ T+ + L
Sbjct: 336 MCPNMFTISSAL 347
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 106/196 (54%), Gaps = 4/196 (2%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG 173
I ++H L S + F D + LI Y CG D+ R+F +L + ++++
Sbjct: 458 HICSQIHAL-SLKSGFQFDNYVANSLIDTYGKCGRIKDATRIFQESPFVDLVAFTSMITA 516
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
++++ + L +++E+ D +++PD+F ++ AC ++ G VH K G I
Sbjct: 517 YSQDGQGEEALKLYLEMQ-DRKIRPDSFVCSSLLNACANLSAYEQGKQVHVHVLKFGFIS 575
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
D+F N+L+ MY KC +++ + F +PER +VSW+++I GF+++G E+ L +M+
Sbjct: 576 DIFAGNSLVNMYAKCGSIDDADRAFSEIPERGIVSWSAMIGGFAQHGHGKEALQLFNRML 635
Query: 294 GCEEGFIPDVITVVTV 309
E+G P+ + V V
Sbjct: 636 --EDGIPPNHMYVYDV 649
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 107/208 (51%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC +D G+++H + + D L+ MY+ G ++ RVF+ +
Sbjct: 245 MINACTGLEDSSQGRKIHGYL-IKLAYDLDLFSANALVDMYAKVGTLEEAIRVFEEIAKP 303
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WNA+++G E + L +F +++ + + P+ FT +KAC G+ G +
Sbjct: 304 DIVSWNAIIAGCALREYHCWALELFGKMNR-SGMCPNMFTISSALKACAGMGLKELGRQL 362
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H KM + D F++ LI MY KC + + LF +MPER+L+ WN+ I G S+NG
Sbjct: 363 HSSLLKMDIRSDSFLAVGLIDMYSKCDLMTDARLLFNLMPERDLIVWNAAITGHSQNGED 422
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M +EG + IT+ TVL
Sbjct: 423 LEAVSLFPSMH--KEGVGFNQITLSTVL 448
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 101/189 (53%), Gaps = 2/189 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+AC E+G+++H + +D + LI MYS C D+R +F+ + R+
Sbjct: 347 LKACAGMGLKELGRQLHSSL-LKMDIRSDSFLAVGLIDMYSKCDLMTDARLLFNLMPERD 405
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L WNA ++G ++N + +S+F + + + + T V+K+ + S +H
Sbjct: 406 LIVWNAAITGHSQNGEDLEAVSLFPSMHKEG-VGFNQITLSTVLKSVASLQVDHICSQIH 464
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
++ K G D +V+N+LI YGKC +++ ++F+ P +LV++ S+I +S++G
Sbjct: 465 ALSLKSGFQFDNYVANSLIDTYGKCGRIKDATRIFQESPFVDLVAFTSMITAYSQDGQGE 524
Query: 284 ESFDLLIKM 292
E+ L ++M
Sbjct: 525 EALKLYLEM 533
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
SS+ P + ++ ++ C G +H K+GL D + N LI +Y KC F
Sbjct: 97 SSNFHSTPISISYSNLLFQCTASKASTPGKEIHARVIKLGLSQDPKIRNLLINLYSKCQF 156
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM----MGCEEGFIPDVITV 306
+ K+ + E +LVSW+++I G+S+NGF E+ +M + C E P ++
Sbjct: 157 FKYARKMVDESTEPDLVSWSALISGYSQNGFGKEAISAFYEMHLLGVKCNEFTFPSLLKA 216
Query: 307 VT 308
T
Sbjct: 217 CT 218
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + E GK+VH V F +D L+ MY+ CG D+ R F + R
Sbjct: 548 LLNACANLSAYEQGKQVHVHV-LKFGFISDIFAGNSLVNMYAKCGSIDDADRAFSEIPER 606
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
+ W+A++ GF ++ + L +F + D + P++ V AC
Sbjct: 607 GIVSWSAMIGGFAQHGHGKEALQLFNRMLEDG-IPPNHMYVYDVPSAC 653
>gi|302809506|ref|XP_002986446.1| hypothetical protein SELMODRAFT_123789 [Selaginella moellendorffii]
gi|300145982|gb|EFJ12655.1| hypothetical protein SELMODRAFT_123789 [Selaginella moellendorffii]
Length = 642
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 121/278 (43%), Gaps = 70/278 (25%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C +D G VH+ + AS++ +D + ++ MY CG ++ +VF S+ +
Sbjct: 22 LLRECARSRDFAEGSLVHQRIIASSRHRHDRFLQNLVVRMYGECGRVDEAAKVFHSIARK 81
Query: 163 NLFQWNALVSGFTKN-------ELYTDVL---------------SIFVELSSDTELK--- 197
NLF W+++++ F +N ELY+D++ SI LS EL
Sbjct: 82 NLFSWSSMIAAFAQNGHSTAAVELYSDMIQRSGLRPDSDVIAWNSIIAVLSQHGELDRAL 141
Query: 198 ------------PDNFTFPCVIKACGGI--ADVGFGSGVHGMAAKMGLIGDVFVSNALIA 243
PD T ++ CGG ++ G + + + L GD + NALI
Sbjct: 142 ELYRKMDESAVPPDRITLASLLDGCGGDRPRELEIGRFIDKESVRKALRGDPAIDNALIR 201
Query: 244 MYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG-----------FSCESFDL---- 288
MYG+C VEE +F M RNL SWN+II ++NG + E DL
Sbjct: 202 MYGRCRRVEEARAVFATMGLRNLASWNAIIAANAQNGCGSVERARNVFAAMEERDLVSWT 261
Query: 289 ----------------LIKMMGCEEGFIPDVITVVTVL 310
L+ + +EG +PD IT T+L
Sbjct: 262 AIISANAANGHFLESVLLYLWMIQEGVLPDRITYATLL 299
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 133/311 (42%), Gaps = 60/311 (19%)
Query: 41 RSIF---KEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLK 97
R++F +E+ +S +A + + G HFL+ + L ++QE + +
Sbjct: 246 RNVFAAMEERDLVSWTAIISANAANG-HFLESVLLY----------LWMIQEGVLPDRIT 294
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSA--STQFSNDFIINTRLITMYSLCGFPLDSRRV 155
AT LL C ++ I+ G+ +H + + D ++ + L+ +Y CG +++ V
Sbjct: 295 YAT--LLAGCLKQRAIDPGRMIHAHIESFYGRSMDRDNVLGSHLVNLYRRCGSLEEAKSV 352
Query: 156 FDSL----------------------KTRNLFQ--------------WNALVSGFTKNEL 179
FD L + LFQ WNA++ + +N
Sbjct: 353 FDRLGDPDASCWSAMIASYAQSGYGSQALELFQRMDRRGINTVNTATWNAMIGAYAQNGH 412
Query: 180 YTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSN 239
L ++ ++ S ++PD T + A I + G V A L D V+
Sbjct: 413 PGAGLELYQQMKSQG-IQPDRATLVIALDAAAMIEEFELGRDVLIDGA---LEHDERVAT 468
Query: 240 ALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
A+I + + ++F+ +P R+ + W++++ +++NG S + +L +M+ EGF
Sbjct: 469 AMIGILARSGKTIRAKRVFDSIPRRDEICWSAMVTAYAQNGHSILALELFSEMV--VEGF 526
Query: 300 IPDVITVVTVL 310
+ D +V++L
Sbjct: 527 VADKAAIVSIL 537
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
D F +++ C D GS VH + A D F+ N ++ MYG+C V+E K+
Sbjct: 15 DAQGFASLLRECARSRDFAEGSLVHQRIIASSRHRHDRFLQNLVVRMYGECGRVDEAAKV 74
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
F + +NL SW+S+I F++NG S + +L M+ G PD
Sbjct: 75 FHSIARKNLFSWSSMIAAFAQNGHSTAAVELYSDMIQ-RSGLRPD 118
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 113/262 (43%), Gaps = 40/262 (15%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNADLKEATGV--LLQACGHEK--DIEIGKRVHELVSA 125
I + + L++AL L ++ +A + + LL CG ++ ++EIG+ + + S
Sbjct: 127 IIAVLSQHGELDRALELYRKMDESAVPPDRITLASLLDGCGGDRPRELEIGRFIDK-ESV 185
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKN-----ELY 180
D I+ LI MY C ++R VF ++ RNL WNA+++ +N E
Sbjct: 186 RKALRGDPAIDNALIRMYGRCRRVEEARAVFATMGLRNLASWNAIIAANAQNGCGSVERA 245
Query: 181 TDVLSIFVE---------LSSDTE------------------LKPDNFTFPCVIKACGGI 213
+V + E +S++ + PD T+ ++ C
Sbjct: 246 RNVFAAMEERDLVSWTAIISANAANGHFLESVLLYLWMIQEGVLPDRITYATLLAGCLKQ 305
Query: 214 ADVGFGSGVHGMAAKM---GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
+ G +H + D + + L+ +Y +C +EE +F+ + + + W+
Sbjct: 306 RAIDPGRMIHAHIESFYGRSMDRDNVLGSHLVNLYRRCGSLEEAKSVFDRLGDPDASCWS 365
Query: 271 SIICGFSENGFSCESFDLLIKM 292
++I ++++G+ ++ +L +M
Sbjct: 366 AMIASYAQSGYGSQALELFQRM 387
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 6/162 (3%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+ L A ++ E+G+ V L+ + + +D + T +I + + G + ++RVFDS+
Sbjct: 437 IALDAAAMIEEFELGRDV--LIDGALE--HDERVATAMIGILARSGKTIRAKRVFDSIPR 492
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG-S 220
R+ W+A+V+ + +N L +F E+ + D ++ AC D G S
Sbjct: 493 RDEICWSAMVTAYAQNGHSILALELFSEMVVEG-FVADKAAIVSILAACSQSGDFRRGRS 551
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
M A + +I ++ + ++ E +L MP
Sbjct: 552 YFTSMQADFSVDPIAEHYACVIDLFSRIGWIREAQELAREMP 593
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 90/156 (57%), Gaps = 2/156 (1%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
+F+ + RN+F WNAL+ G+ N L+ +VL F + S++++ P++ T V+ AC +
Sbjct: 349 LFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLG 408
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+ G VH A GL G+V+V NAL+ MY KC +E + +F M ++L+SWN++I
Sbjct: 409 ALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIG 468
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + + ++ +L +M G PD IT + +L
Sbjct: 469 GLAMHSRGADALNLFFQMKNA--GQKPDGITFIGIL 502
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
Query: 117 KRVHELVSA--STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
K+VH++ + + F + I +L+T+ + +R++FD + N+ WN++ G+
Sbjct: 115 KQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGY 174
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
++E Y +V+ +F ++ +++P+ FTFP V+K+CG I + G VH K G G+
Sbjct: 175 AQSESYREVVFLFFQMKG-MDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGN 233
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
FV LI MY V + K+F M ERN+V+W S+I G+
Sbjct: 234 PFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGY 275
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 13/210 (6%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V+L++CG + G++VH + N F+ T LI MYS G D+ ++F +
Sbjct: 204 VVLKSCGKINALIEGEQVHCFLIKCGFRGNPFV-GTTLIDMYSAGGTVGDAYKIFCEMFE 262
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
RN+ W ++++G+ + +F +L P+ I G I G
Sbjct: 263 RNVVAWTSMINGYILSADLVSARRLF-------DLAPERDVVLWNIMVSGYIEG---GDM 312
Query: 222 VHGMAAKMGLIG-DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
V + DV N ++ Y VE + LFE MPERN+ SWN++I G++ NG
Sbjct: 313 VEARKLFXEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNG 372
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E +M+ E P+ T+VTVL
Sbjct: 373 LFFEVLGSFKRML-SESDVPPNDATLVTVL 401
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 6/174 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +++GK VH +S N ++ N L+ MY+ CG ++ VF + T+
Sbjct: 400 VLSACARLGALDLGKWVHVYAESSGLKGNVYVGNA-LMDMYAKCGIIENAISVFRGMDTK 458
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGS 220
+L WN L+ G + D L++F ++ + + KPD TF ++ AC G+ + GF
Sbjct: 459 DLISWNTLIGGLAMHSRGADALNLFFQMKNAGQ-KPDGITFIGILCACTHMGLVEDGFAY 517
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 273
MA ++ + ++ M + +E+ MP E + V W ++
Sbjct: 518 -FQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLL 570
>gi|297745510|emb|CBI40590.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 96/173 (55%), Gaps = 3/173 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+I Y+ CG + +F + RN+ W A++SG+ +N Y LS+F+ + +TE++P
Sbjct: 154 MIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRP 213
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ T V+ AC + + G + A G +++VSNAL+ MY +C +++ +F
Sbjct: 214 NEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVF 273
Query: 259 -EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ RNL SWNS+I G + +G E+ +L KM+ EG PD +T V VL
Sbjct: 274 EEIDGRRNLCSWNSMIMGLAVHGRCDEAIELFYKML--REGAAPDDVTFVGVL 324
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 90/191 (47%), Gaps = 33/191 (17%)
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
+ ++FD + +F +N L+ ++ + + S++ ++ P+ +F + AC
Sbjct: 35 AHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYTQMCLQG-CSPNEHSFTFLFSACA 93
Query: 212 GIAD-------------VGFGSGVHG------MAAKMGLIG------------DVFVSNA 240
++ GFG V M AK+GL+ DV N+
Sbjct: 94 SLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNS 153
Query: 241 LIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI 300
+IA Y +C +E ++LF +MP RN+ SW ++I G+++NG ++ + + MM E
Sbjct: 154 MIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFL-MMEEETEMR 212
Query: 301 PDVITVVTVLP 311
P+ +T+ +VLP
Sbjct: 213 PNEVTLASVLP 223
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-T 161
+L AC + +E+G+R+ + F N ++ N L+ MY+ CG + VF+ +
Sbjct: 221 VLPACANLGALEVGERIEVYARGNGYFKNLYVSNA-LLEMYARCGRIDKAWGVFEEIDGR 279
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVG 217
RNL WN+++ G + + + +F ++ + PD+ TF V+ AC GG+ G
Sbjct: 280 RNLCSWNSMIMGLAVHGRCDEAIELFYKMLREGA-APDDVTFVGVLLACTHGGMVVEG 336
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 4/199 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
D+ GK +H V +D I + L+ MY+ DS RVF L R+ WN+LV
Sbjct: 257 DVIKGKEIHGYV-IRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 315
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
+G+ +N Y + L +F ++ + ++KP F VI AC +A + G +HG + G
Sbjct: 316 AGYVQNGRYNEALRLFRQMVT-AKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 374
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
++F+++AL+ MY KC ++ K+F+ M + VSW +II G + +G E+ L +
Sbjct: 375 GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEE 434
Query: 292 MMGCEEGFIPDVITVVTVL 310
M +G P+ + V VL
Sbjct: 435 MK--RQGVKPNQVAFVAVL 451
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
Query: 148 FPLDS-RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCV 206
F +DS RRVF+ + +++ +N +++G+ ++ +Y D L + E+ + T+LKPD+FT V
Sbjct: 190 FGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGT-TDLKPDSFTLSSV 248
Query: 207 IKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNL 266
+ DV G +HG + G+ DV++ ++L+ MY K A +E+ ++F + R+
Sbjct: 249 LPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG 308
Query: 267 VSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+SWNS++ G+ +NG E+ L +M+ + P + +V+P
Sbjct: 309 ISWNSLVAGYVQNGRYNEALRLFRQMVTAK--VKPGAVAFSSVIP 351
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 106/209 (50%), Gaps = 39/209 (18%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+I++Y+ ++ +F +LK+ + W +++ FT L++ L+ FVE+ + P
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRC-P 103
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK----------- 247
D+ FP V+K+C + D+ FG VHG ++G+ D++ NAL+ MY K
Sbjct: 104 DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVG 163
Query: 248 ----------------------CAF---VEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
C ++ + ++FEVMP +++VS+N+II G++++G
Sbjct: 164 NVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMY 223
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ +++ MG + PD T+ +VLP
Sbjct: 224 EDALR-MVREMGTTD-LKPDSFTLSSVLP 250
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 107/204 (52%), Gaps = 4/204 (1%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
+S+ ++ +L L+ L +E +L Q DI + VH + N +
Sbjct: 20 QSRKVSSSLPKLE--LDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSL- 76
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
+L+ Y+ +R+VFD + RN+ N ++ + N Y + + +F +
Sbjct: 77 GVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCG-CN 135
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
++PD++TFPCV+KAC + G +HG A K+GL +FV N L++MYGKC F+ E
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 195
Query: 256 KLFEVMPERNLVSWNSIICGFSEN 279
+ + M R++VSWNS++ G+++N
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQN 219
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 85/158 (53%), Gaps = 3/158 (1%)
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
+ +F + ++L WN ++ + KN + + + ++ + +D +PD + V+ ACG
Sbjct: 263 KDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADG-FEPDAVSITSVLPACGD 321
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
+ + G +HG + LI ++ + NALI MY KC +E+ +FE M R++VSW ++
Sbjct: 322 TSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAM 381
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I + +G C++ L K+ + G +PD I VT L
Sbjct: 382 ISAYGFSGRGCDAVALFSKLQ--DSGLVPDSIAFVTTL 417
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 37/209 (17%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC I IG+++H + S+ + L++MY CGF ++R V D + R
Sbjct: 146 VLKACSCSGTIVIGRKIHG-SATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR 204
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+LV G+ +N+ + D L + C + V
Sbjct: 205 DVVSWNSLVVGYAQNQRFDDALEV-----------------------CREMESVKISHDA 241
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
MA+ + + + N + +V++M F M +++LVSWN +I + +N
Sbjct: 242 GTMASLLPAVSNTTTENVM--------YVKDM---FFKMGKKSLVSWNVMIGVYMKNAMP 290
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ +L +M +GF PD +++ +VLP
Sbjct: 291 VEAVELYSRMEA--DGFEPDAVSITSVLP 317
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG + +GK++H + N ++ LI MY+ CG +R VF+++K+R
Sbjct: 315 VLPACGDTSALSLGKKIHGYIERKKLIPN-LLLENALIDMYAKCGCLEKARDVFENMKSR 373
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
++ W A++S + + D +++F +L D+ L PD+ F + AC
Sbjct: 374 DVVSWTAMISAYGFSGRGCDAVALFSKL-QDSGLVPDSIAFVTTLAAC 420
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,450,722,640
Number of Sequences: 23463169
Number of extensions: 166765121
Number of successful extensions: 475924
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5744
Number of HSP's successfully gapped in prelim test: 1740
Number of HSP's that attempted gapping in prelim test: 418406
Number of HSP's gapped (non-prelim): 31472
length of query: 311
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 169
effective length of database: 9,027,425,369
effective search space: 1525634887361
effective search space used: 1525634887361
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)