BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037178
(311 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 284 bits (727), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 136/257 (52%), Positives = 191/257 (74%), Gaps = 11/257 (4%)
Query: 65 HFLQEITTLCEESKSLNKALSLLQENLHNAD--------LKEATGVLLQACGHEKDIEIG 116
HFL+ I+ CE + L+K+ +QE + + + ++EA G+LLQA G KDIE+G
Sbjct: 45 HFLRRISNFCE-TGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMG 103
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 176
+++H+LVS ST+ ND ++ TR+ITMY++CG P DSR VFD+L+++NLFQWNA++S +++
Sbjct: 104 RKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSR 163
Query: 177 NELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVF 236
NELY +VL F+E+ S T+L PD+FT+PCVIKAC G++DVG G VHG+ K GL+ DVF
Sbjct: 164 NELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVF 223
Query: 237 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM--G 294
V NAL++ YG FV + ++LF++MPERNLVSWNS+I FS+NGFS ESF LL +MM
Sbjct: 224 VGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEEN 283
Query: 295 CEEGFIPDVITVVTVLP 311
+ F+PDV T+VTVLP
Sbjct: 284 GDGAFMPDVATLVTVLP 300
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 113/212 (53%), Gaps = 4/212 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC D+ IG VH LV T D + L++ Y GF D+ ++FD + R
Sbjct: 193 VIKACAGMSDVGIGLAVHGLV-VKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPER 251
Query: 163 NLFQWNALVSGFTKNELYTD---VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
NL WN+++ F+ N + +L +E + D PD T V+ C ++G G
Sbjct: 252 NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 311
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
GVHG A K+ L ++ ++NAL+ MY KC + +F++ +N+VSWN+++ GFS
Sbjct: 312 KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAE 371
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
G + +FD+L +M+ E D +T++ +P
Sbjct: 372 GDTHGTFDVLRQMLAGGEDVKADEVTILNAVP 403
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC K + +GK VH + D + ++++Y CG + +FD+++ +
Sbjct: 502 LLSACSKLKSLRLGKEVHGFI-IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN +++G+ +N L +F ++ ++ + V AC + + G
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVL-YGIQLCGISMMPVFGACSLLPSLRLGREA 619
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H A K L D F++ +LI MY K + + K+F + E++ SWN++I G+ +G +
Sbjct: 620 HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLA 679
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M G PD +T + VL
Sbjct: 680 KEAIKLFEEMQ--RTGHNPDDLTFLGVL 705
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 104/202 (51%), Gaps = 5/202 (2%)
Query: 95 DLKEATGVLLQA---CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLD 151
D+K +L A C HE + K +H S +F + ++ + Y+ CG
Sbjct: 390 DVKADEVTILNAVPVCFHESFLPSLKELH-CYSLKQEFVYNELVANAFVASYAKCGSLSY 448
Query: 152 SRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG 211
++RVF ++++ + WNAL+ G ++ L +++ + L PD+FT ++ AC
Sbjct: 449 AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI-SGLLPDSFTVCSLLSACS 507
Query: 212 GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 271
+ + G VHG + L D+FV +++++Y C + + LF+ M +++LVSWN+
Sbjct: 508 KLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNT 567
Query: 272 IICGFSENGFSCESFDLLIKMM 293
+I G+ +NGF + + +M+
Sbjct: 568 VITGYLQNGFPDRALGVFRQMV 589
>sp|Q9SB36|PP337_ARATH Pentatricopeptide repeat-containing protein At4g25270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E53 PE=3
SV=1
Length = 527
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 124/210 (59%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ C + I+ G RVH L+ N+ I+++L+ +Y+ CG+ + VFD + R
Sbjct: 98 LLETCYSLRAIDHGVRVHHLIPPYL-LRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKR 156
Query: 163 NL--FQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ F WN+L+SG+ + Y D ++++ +++ D +KPD FTFP V+KACGGI V G
Sbjct: 157 DSSPFAWNSLISGYAELGQYEDAMALYFQMAEDG-VKPDRFTFPRVLKACGGIGSVQIGE 215
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H K G DV+V NAL+ MY KC + + +F+++P ++ VSWNS++ G+ +G
Sbjct: 216 AIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHG 275
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ D+ M+ + G PD + + +VL
Sbjct: 276 LLHEALDIFRLMV--QNGIEPDKVAISSVL 303
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 12/209 (5%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+ACG ++IG+ +H +LV F D + L+ MY+ CG + +R VFD +
Sbjct: 201 VLKACGGIGSVQIGEAIHRDLVKEG--FGYDVYVLNALVVMYAKCGDIVKARNVFDMIPH 258
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ WN++++G+ + L + L IF L ++PD V+ + G
Sbjct: 259 KDYVSWNSMLTGYLHHGLLHEALDIF-RLMVQNGIEPDKVAISSVLAR---VLSFKHGRQ 314
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG + G+ ++ V+NALI +Y K + + +F+ M ER+ VSWN+II S+N
Sbjct: 315 LHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN 374
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ F+ + + PD IT V+VL
Sbjct: 375 GLKYFEQMHRANAK-----PDGITFVSVL 398
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 7/138 (5%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
LI +YS G + +FD + R+ WNA++S +KN ++ L F ++ KP
Sbjct: 334 LIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKN---SNGLKYFEQMHR-ANAKP 389
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
D TF V+ C V G + M+ + G+ + ++ +YG+ +EE +
Sbjct: 390 DGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSM 449
Query: 258 F--EVMPERNLVSWNSII 273
E+ E W +++
Sbjct: 450 IVQEMGLEAGPTVWGALL 467
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 141/248 (56%), Gaps = 7/248 (2%)
Query: 66 FLQEITTLCEESKSLNKALSLLQE-NLHNADL-KEATGVLLQACGHEKDIEIGKRVHELV 123
+ +++LC+ + + +ALSL+ E + N + E G +LQ C +E+D+ GK++H +
Sbjct: 38 YFHRVSSLCKNGE-IKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARI 96
Query: 124 SASTQF-SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTD 182
+ F + + I T+L+ Y+ C + +F L+ RN+F W A++ + L
Sbjct: 97 LKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEG 156
Query: 183 VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALI 242
L FVE+ + E+ PDNF P V KACG + FG GVHG K GL VFV+++L
Sbjct: 157 ALMGFVEML-ENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLA 215
Query: 243 AMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
MYGKC +++ K+F+ +P+RN V+WN+++ G+ +NG + E+ L M ++G P
Sbjct: 216 DMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMR--KQGVEPT 273
Query: 303 VITVVTVL 310
+TV T L
Sbjct: 274 RVTVSTCL 281
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 98/202 (48%), Gaps = 4/202 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L A + +E GK+ H ++ D I+ T L+ Y G + VFD + ++
Sbjct: 281 LSASANMGGVEEGKQSHA-IAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKD 339
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN ++SG+ + L D + + +L +LK D T ++ A ++ G V
Sbjct: 340 VVTWNLIISGYVQQGLVEDAIYM-CQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQ 398
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
+ D+ +++ ++ MY KC + + K+F+ E++L+ WN+++ ++E+G S
Sbjct: 399 CYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSG 458
Query: 284 ESFDLLIKMMGCEEGFIPDVIT 305
E+ L M EG P+VIT
Sbjct: 459 EALRLFYGMQ--LEGVPPNVIT 478
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V L AC H + IG+ +H + + Q S+ I T L+ MY+ CG + +VF S
Sbjct: 551 VALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLY 610
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
L NA++S + + ++++ L LKPDN T V+ AC D+
Sbjct: 611 SELPLSNAMISAYALYGNLKEAIALYRSLEG-VGLKPDNITITNVLSACNHAGDI 664
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 4/149 (2%)
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL W +++G +N + + +F+ ++ L+P+ F+ + AC +A + G +
Sbjct: 510 NLISWTTMMNGMVQNGCSEEAI-LFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTI 568
Query: 223 HGMAAK-MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
HG + + V + +L+ MY KC + + K+F L N++I ++ G
Sbjct: 569 HGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGN 628
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L + G G PD IT+ VL
Sbjct: 629 LKEAIALYRSLEGV--GLKPDNITITNVL 655
>sp|Q9FXH1|PPR52_ARATH Pentatricopeptide repeat-containing protein At1g19720
OS=Arabidopsis thaliana GN=DYW7 PE=2 SV=1
Length = 894
Score = 141 bits (355), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 156/289 (53%), Gaps = 20/289 (6%)
Query: 26 PQFPATVIQ-------RNKHSLRSIFKEKS-SLSLSAKTNNASTQGLHFLQEITTLCEES 77
P FP T + N L ++K+ S + + N + +L +L E
Sbjct: 7 PSFPKTFLNYQTPAKVENSPELHPKSRKKNLSFTKKKEPNIIPDEQFDYLCRNGSLLEAE 66
Query: 78 KSLNKALSLLQENLHNADLKEATGV-LLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
K+L+ SL Q+ + +K +T + LL++C I +G+ +H T+ D +
Sbjct: 67 KALD---SLFQQG---SKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTE--PDVFVE 118
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
T+L++MY+ CG D+R+VFDS++ RNLF W+A++ +++ + +V +F + D L
Sbjct: 119 TKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVL 178
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
PD+F FP +++ C DV G +H + K+G+ + VSN+++A+Y KC ++ K
Sbjct: 179 -PDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATK 237
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
F M ER++++WNS++ + +NG E+ +L+ +M +EG P ++T
Sbjct: 238 FFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEME--KEGISPGLVT 284
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
T ++F W A++SG N + L +F ++ + P+ T + AC + + GS
Sbjct: 314 TADVFTWTAMISGLIHNGMRYQALDMFRKMFL-AGVVPNAVTIMSAVSACSCLKVINQGS 372
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
VH +A KMG I DV V N+L+ MY KC +E+ K+F+ + +++ +WNS+I G+ + G
Sbjct: 373 EVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAG 432
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++++L +M + P++IT T++
Sbjct: 433 YCGKAYELFTRMQ--DANLRPNIITWNTMI 460
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 44/213 (20%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+ AC K I G VH ++ F +D ++ L+ MYS CG D+R+VFDS+K ++
Sbjct: 359 VSACSCLKVINQGSEVHS-IAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKD 417
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
++ WN++++G+ + +F + D L+P+ T+
Sbjct: 418 VYTWNSMITGYCQAGYCGKAYELFTRM-QDANLRPNIITW-------------------- 456
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-----ERNLVSWNSIICGFSE 278
N +I+ Y K E + LF+ M +RN +WN II G+ +
Sbjct: 457 ---------------NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQ 501
Query: 279 NGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
NG E+ +L KM F+P+ +T++++LP
Sbjct: 502 NGKKDEALELFRKMQFSR--FMPNSVTILSLLP 532
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 138 bits (347), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 130/244 (53%), Gaps = 6/244 (2%)
Query: 69 EITTLCEESKSLNKALSLLQ--ENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSAS 126
++ LC K L +A+ LL + L A ++ L++ C ++ E G +V+ ++ S
Sbjct: 65 QLHGLCANGK-LEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYS-IALS 122
Query: 127 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSI 186
+ S + + M+ G +D+ VF + RNLF WN LV G+ K + + + +
Sbjct: 123 SMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCL 182
Query: 187 FVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
+ + +KPD +TFPCV++ CGGI D+ G VH + G D+ V NALI MY
Sbjct: 183 YHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYV 242
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
KC V+ LF+ MP R+++SWN++I G+ ENG E +L M G PD++T+
Sbjct: 243 KCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVD--PDLMTL 300
Query: 307 VTVL 310
+V+
Sbjct: 301 TSVI 304
Score = 104 bits (260), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 3/200 (1%)
Query: 93 NADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDS 152
+ DL T V+ AC D +G+ +H V +T F+ D + L MY G ++
Sbjct: 294 DPDLMTLTSVI-SACELLGDRRLGRDIHAYV-ITTGFAVDISVCNSLTQMYLNAGSWREA 351
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
++F ++ +++ W ++SG+ N L + + + D+ +KPD T V+ AC
Sbjct: 352 EKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDS-VKPDEITVAAVLSACAT 410
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
+ D+ G +H +A K LI V V+N LI MY KC +++ + +F +P +N++SW SI
Sbjct: 411 LGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSI 470
Query: 273 ICGFSENGFSCESFDLLIKM 292
I G N E+ L +M
Sbjct: 471 IAGLRLNNRCFEALIFLRQM 490
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 12/214 (5%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL 159
+L AC D++ G +H+L + S + N LI MYS C + +F ++
Sbjct: 401 VAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN-LINMYSKCKCIDKALDIFHNI 459
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
+N+ W ++++G N + L IF+ T L+P+ T + AC I + G
Sbjct: 460 PRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMT-LQPNAITLTAALAACARIGALMCG 517
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H + G+ D F+ NAL+ MY +C + F ++++ SWN ++ G+SE
Sbjct: 518 KEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSER 576
Query: 280 G---FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E FD ++K PD IT +++L
Sbjct: 577 GQGSMVVELFDRMVK-----SRVRPDEITFISLL 605
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 131 bits (330), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 126/245 (51%), Gaps = 40/245 (16%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC I++G+ VH V + + ND I++ + MY+ C ++R +FDS+ R
Sbjct: 259 VISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Query: 163 NLF-------------------------------QWNALVSGFTKNELYTDVLSIFVELS 191
N+ WNAL++G+T+N + LS+F L
Sbjct: 319 NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK 378
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVH------GMAAKMGLIGDVFVSNALIAMY 245
++ + P +++F ++KAC +A++ G H G + G D+FV N+LI MY
Sbjct: 379 RES-VCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
KC VEE +F M ER+ VSWN++I GF++NG+ E+ +L +M+ E G PD IT
Sbjct: 438 VKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREML--ESGEKPDHIT 495
Query: 306 VVTVL 310
++ VL
Sbjct: 496 MIGVL 500
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 116/238 (48%), Gaps = 32/238 (13%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL +C K I R + FSN+ I RLI YS CG D R+VFD + R
Sbjct: 25 LLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQR 84
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDN---------------------- 200
N++ WN++V+G TK + S+F + + ++
Sbjct: 85 NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMH 144
Query: 201 --------FTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
++F V+ AC G+ D+ G VH + AK + DV++ +AL+ MY KC V
Sbjct: 145 KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVN 204
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++F+ M +RN+VSWNS+I F +NG + E+ D+ M+ E PD +T+ +V+
Sbjct: 205 DAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML--ESRVEPDEVTLASVI 260
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 113/219 (51%), Gaps = 34/219 (15%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC D+ G +VH L+ A + F +D I + L+ MYS CG D++RVFD + R
Sbjct: 158 VLSACSGLNDMNKGVQVHSLI-AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR 216
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN+L++ F +N + L +F ++ ++ ++PD T VI AC ++ + G V
Sbjct: 217 NVVSWNSLITCFEQNGPAVEALDVF-QMMLESRVEPDEVTLASVISACASLSAIKVGQEV 275
Query: 223 HGMAAKMG-LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP------------------- 262
HG K L D+ +SNA + MY KC+ ++E +F+ MP
Sbjct: 276 HGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAS 335
Query: 263 ------------ERNLVSWNSIICGFSENGFSCESFDLL 289
ERN+VSWN++I G+++NG + E+ L
Sbjct: 336 TKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLF 374
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFS----NDFIINTRLITMYSLCGFPLDSRRVFD 157
+L+AC ++ +G + H ++ +F +D + LI MY CG + VF
Sbjct: 392 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 451
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
+ R+ WNA++ GF +N + L +F E+ E KPD+ T V+ ACG V
Sbjct: 452 KMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE-KPDHITMIGVLSACGHAGFVE 510
Query: 218 FGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICG 275
G M G+ ++ + G+ F+EE + E MP + + V W S++
Sbjct: 511 EGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 187 FVELSSDTELKPDNFTFPCVIKAC-GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
F++L++D D+ F ++ +C + VH K G ++F+ N LI Y
Sbjct: 6 FLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAY 65
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
KC +E+ ++F+ MP+RN+ +WNS++ G ++ GF E+ L M
Sbjct: 66 SKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSM 112
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 130 bits (328), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 114/196 (58%), Gaps = 5/196 (2%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-TRNLFQWNALVSGFT 175
+R+H LV + S+DF + +LI YS P S VF + +N++ WN+++ F+
Sbjct: 24 RRIHALVISLGLDSSDFF-SGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFS 82
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
KN L+ + L + +L ++++ PD +TFP VIKAC G+ D G V+ MG D+
Sbjct: 83 KNGLFPEALEFYGKLR-ESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDL 141
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
FV NAL+ MY + + ++F+ MP R+LVSWNS+I G+S +G+ E+ ++ ++
Sbjct: 142 FVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKN- 200
Query: 296 EEGFIPDVITVVTVLP 311
+PD TV +VLP
Sbjct: 201 -SWIVPDSFTVSSVLP 215
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 119/208 (57%), Gaps = 5/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+++AC D E+G V+E + F +D + L+ MYS G +R+VFD + R
Sbjct: 112 VIKACAGLFDAEMGDLVYEQI-LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR 170
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN+L+SG++ + Y + L I+ EL ++ + PD+FT V+ A G + V G G+
Sbjct: 171 DLVSWNSLISGYSSHGYYEEALEIYHELK-NSWIVPDSFTVSSVLPAFGNLLVVKQGQGL 229
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG A K G+ V V+N L+AMY K + ++F+ M R+ VS+N++ICG+ +
Sbjct: 230 HGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMV 289
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
ES + ++ + + F PD++TV +VL
Sbjct: 290 EESVRMFLENL---DQFKPDLLTVSSVL 314
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 123/234 (52%), Gaps = 7/234 (2%)
Query: 80 LNKALSLLQENLHN--ADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINT 137
+ +++ + ENL DL + VL +ACGH +D+ + K ++ + F + +
Sbjct: 289 VEESVRMFLENLDQFKPDLLTVSSVL-RACGHLRDLSLAKYIYNYM-LKAGFVLESTVRN 346
Query: 138 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
LI +Y+ CG + +R VF+S++ ++ WN+++SG+ ++ + + +F ++ E +
Sbjct: 347 ILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLF-KMMMIMEEQ 405
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
D+ T+ +I +AD+ FG G+H K G+ D+ VSNALI MY KC V + +K+
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKI 465
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
F M + V+WN++I G + +M E +PD+ T + LP
Sbjct: 466 FSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSE--VVPDMATFLVTLP 517
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 2/159 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+ MY P D+RRVFD + R+ +N ++ G+ K E+ + + +F+E + + KP
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE--NLDQFKP 305
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D T V++ACG + D+ ++ K G + + V N LI +Y KC + +F
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVF 365
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEE 297
M ++ VSWNSII G+ ++G E+ L MM EE
Sbjct: 366 NSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE 404
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 4/199 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
D++ GK +H + D ++ LI MY+ CG DS ++F S+ T + WN ++
Sbjct: 423 DLKFGKGLHS-NGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVI 481
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
S + + L + ++ +E+ PD TF + C +A G +H + G
Sbjct: 482 SACVRFGDFATGLQVTTQMRK-SEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGY 540
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
++ + NALI MY KC +E ++FE M R++V+W +I + G ++ +
Sbjct: 541 ESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFAD 600
Query: 292 MMGCEEGFIPDVITVVTVL 310
M + G +PD + + ++
Sbjct: 601 ME--KSGIVPDSVVFIAII 617
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 117/208 (56%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L++A D+ +G+ +H +V S F + + L+ +Y+ CG + +VFD + +
Sbjct: 127 LIKAVTTMADVRLGETIHSVVIRSG-FGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK 185
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN++++GF +N + L+++ E++S +KPD FT ++ AC I + G V
Sbjct: 186 DLVAWNSVINGFAENGKPEEALALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLGKRV 244
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K+GL ++ SN L+ +Y +C VEE LF+ M ++N VSW S+I G + NGF
Sbjct: 245 HVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFG 304
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L K M EG +P IT V +L
Sbjct: 305 KEAIELF-KYMESTEGLLPCEITFVGIL 331
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 91/160 (56%), Gaps = 3/160 (1%)
Query: 152 SRRVFDSL-KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
+ +VF + K N+F WN L+ G+ + S++ E+ ++PD T+P +IKA
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
+ADV G +H + + G ++V N+L+ +Y C V K+F+ MPE++LV+WN
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S+I GF+ENG E+ L +M +G PD T+V++L
Sbjct: 192 SVINGFAENGKPEEALALYTEMNS--KGIKPDGFTIVSLL 229
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 82/183 (44%), Gaps = 5/183 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + +GKRVH + + + + L+ +Y+ CG +++ +FD + +
Sbjct: 228 LLSACAKIGALTLGKRVH-VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK 286
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGS 220
N W +L+ G N + + +F + S L P TF ++ AC G+ GF
Sbjct: 287 NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF-E 345
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSEN 279
M + + + ++ + + V++ + + MP + N+V W +++ + +
Sbjct: 346 YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 405
Query: 280 GFS 282
G S
Sbjct: 406 GDS 408
>sp|Q0WNP3|PP319_ARATH Pentatricopeptide repeat-containing protein At4g18520
OS=Arabidopsis thaliana GN=PCMP-A2 PE=2 SV=1
Length = 617
Score = 128 bits (322), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ACG + +GK +H + ++ N +I +T L+ +Y CG D+ V L +R
Sbjct: 391 ILRACGSVGALLLGKELHAQIIKNSIEKNVYIGST-LVWLYCKCGESRDAFNVLQQLPSR 449
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W A++SG + ++ L E+ + ++P+ FT+ +KAC + G +
Sbjct: 450 DVVSWTAMISGCSSLGHESEALDFLKEMIQEG-VEPNPFTYSSALKACANSESLLIGRSI 508
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A K + +VFV +ALI MY KC FV E ++F+ MPE+NLVSW ++I G++ NGF
Sbjct: 509 HSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFC 568
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L+ +M EGF D T+L
Sbjct: 569 REALKLMYRMEA--EGFEVDDYIFATIL 594
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC EK + G++VH LV D + T L+ MY+ CG D R+VFD + R
Sbjct: 290 ILKACSEEKALRFGRQVHSLV-VKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNR 348
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N W ++++ + + +S+F + L +N T +++ACG + + G +
Sbjct: 349 NTVTWTSIIAAHAREGFGEEAISLF-RIMKRRHLIANNLTVVSILRACGSVGALLLGKEL 407
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K + +V++ + L+ +Y KC + + + +P R++VSW ++I G S G
Sbjct: 408 HAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHE 467
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ D L +M+ +EG P+ T + L
Sbjct: 468 SEALDFLKEMI--QEGVEPNPFTYSSALK 494
Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 7/209 (3%)
Query: 103 LLQACGHEKDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL C + E+G++VH +V + I+ + L+ Y+ CG + R FD ++
Sbjct: 190 LLNLCSRRAEFELGRQVHGNMVKVGV---GNLIVESSLVYFYAQCGELTSALRAFDMMEE 246
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+++ W A++S ++ + +F+ + + L P+ FT ++KAC + FG
Sbjct: 247 KDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFL-PNEFTVCSILKACSEEKALRFGRQ 305
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH + K + DVFV +L+ MY KC + + K+F+ M RN V+W SII + GF
Sbjct: 306 VHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGF 365
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L M I + +TVV++L
Sbjct: 366 GEEAISLFRIMK--RRHLIANNLTVVSIL 392
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 98/196 (50%), Gaps = 6/196 (3%)
Query: 117 KRVHELVSASTQFSNDFI-INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
KR+H + A F + I LI+ G + +R+VFDS+ +N W A++ G+
Sbjct: 102 KRIHAM--ALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYL 159
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
K L + ++F + + F C++ C A+ G VHG K+G +G++
Sbjct: 160 KYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG-VGNL 218
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGC 295
V ++L+ Y +C + ++ F++M E++++SW ++I S G ++ + I M+
Sbjct: 219 IVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLN- 277
Query: 296 EEGFIPDVITVVTVLP 311
F+P+ TV ++L
Sbjct: 278 -HWFLPNEFTVCSILK 292
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 115/210 (54%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L ACG I GK++H + T F + + + LI MY C ++ VFD +K
Sbjct: 274 GSVLPACGGLGAINEGKQIHACI-IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 332
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+N+ W A+V G+ + + + IF+++ + + PD++T I AC ++ + GS
Sbjct: 333 QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR-SGIDPDHYTLGQAISACANVSSLEEGS 391
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
HG A GLI V VSN+L+ +YGKC +++ +LF M R+ VSW +++ +++ G
Sbjct: 392 QFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFG 451
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ L KM+ + G PD +T+ V+
Sbjct: 452 RAVETIQLFDKMV--QHGLKPDGVTLTGVI 479
Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 35/228 (15%)
Query: 108 GHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQW 167
GH + +GK++H V F + ++ + L+ MY+ G D+++VF L RN +
Sbjct: 153 GH---VSLGKQIHGQV-IKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMY 208
Query: 168 NALVSGFTKNELYTDVLSIFVELSSDT-----------------------------ELKP 198
N+L+ G + D L +F + D+ LK
Sbjct: 209 NSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKM 268
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D + F V+ ACGG+ + G +H + ++V +ALI MY KC + +F
Sbjct: 269 DQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVF 328
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
+ M ++N+VSW +++ G+ + G + E+ + + M G PD T+
Sbjct: 329 DRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQ--RSGIDPDHYTL 374
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 83/182 (45%), Gaps = 4/182 (2%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G + AC + +E G + H + ++ + ++ L+T+Y CG DS R+F+ +
Sbjct: 375 GQAISACANVSSLEEGSQFHG-KAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R+ W A+VS + + + + +F ++ LKPD T VI AC V G
Sbjct: 434 VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG-LKPDGVTLTGVISACSRAGLVEKGQ 492
Query: 221 GVHG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSE 278
M ++ G++ + + +I ++ + +EE ++ MP + + W +++
Sbjct: 493 RYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRN 552
Query: 279 NG 280
G
Sbjct: 553 KG 554
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 90/237 (37%), Gaps = 37/237 (15%)
Query: 87 LQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC 146
+ N ++ +K+ G+ G K +H + + + F+ N ++ Y+L
Sbjct: 1 MASNYYSVQIKQCIGL-----GARNQSRYVKMIHGNIIRALPYPETFLYNN-IVHAYALM 54
Query: 147 GFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSS-------------- 192
+RRVFD + NLF WN L+ ++K L +++ S F +L
Sbjct: 55 KSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYS 114
Query: 193 -----------------DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
D T ++K V G +HG K+G +
Sbjct: 115 LSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYL 174
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
V + L+ MY + + K+F + +RN V +NS++ G G ++ L M
Sbjct: 175 LVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM 231
>sp|Q9LR69|PPR8_ARATH Pentatricopeptide repeat-containing protein At1g03540
OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1
Length = 609
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 117/210 (55%), Gaps = 8/210 (3%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
G +L ACG+ + ++ GK +H + + SN ++ + L+ MY CG ++R+VF+ +
Sbjct: 269 GTVLTACGNLRRLKQGKEIHGKLITNGIGSN-VVVESSLLDMYGKCGSVREARQVFNGMS 327
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+N W+AL+ G+ +N + + IF E+ + D + F V+KAC G+A V G
Sbjct: 328 KKNSVSWSALLGGYCQNGEHEKAIEIFREME-----EKDLYCFGTVLKACAGLAAVRLGK 382
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+HG + G G+V V +ALI +YGK ++ +++ M RN+++WN+++ ++NG
Sbjct: 383 EIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNG 442
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ M+ ++G PD I+ + +L
Sbjct: 443 RGEEAVSFFNDMV--KKGIKPDYISFIAIL 470
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 107/189 (56%), Gaps = 1/189 (0%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
++AC ++ +G+ H +V N FI +T L +Y + P+D+RRVFD + +
Sbjct: 170 VKACSELGEVRLGRCFHGVVITHGFEWNHFISST-LAYLYGVNREPVDARRVFDEMPEPD 228
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W A++S F+KN+LY + L +F + L PD TF V+ ACG + + G +H
Sbjct: 229 VICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIH 288
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G G+ +V V ++L+ MYGKC V E ++F M ++N VSW++++ G+ +NG
Sbjct: 289 GKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHE 348
Query: 284 ESFDLLIKM 292
++ ++ +M
Sbjct: 349 KAIEIFREM 357
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 129/274 (47%), Gaps = 10/274 (3%)
Query: 40 LRSIFKEKSSLSLSAKTNNASTQGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEA 99
L+ F + +SL L+ ++++ + E+ L + L +A+ +L H++++
Sbjct: 6 LKRHFSQHASLCLTPSISSSAPTKQSRILELCKLGQ----LTEAIRILNST-HSSEIPAT 60
Query: 100 TGV---LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
+ LLQ C G + H V S ++ + N+ L + L ++RRVF
Sbjct: 61 PKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVF 120
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
D ++ W +++SG+ + + L +FVE+ S L + FT +KAC + +V
Sbjct: 121 DGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVS-FGLDANEFTLSSAVKACSELGEV 179
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G HG+ G + F+S+ L +YG + ++F+ MPE +++ W +++ F
Sbjct: 180 RLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAF 239
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S+N E+ L M +G +PD T TVL
Sbjct: 240 SKNDLYEEALGLFYAMHR-GKGLVPDGSTFGTVL 272
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 7/196 (3%)
Query: 82 KALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLIT 141
KA+ + +E + DL G +L+AC + +GK +H F N I+ + LI
Sbjct: 349 KAIEIFRE-MEEKDLY-CFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGN-VIVESALID 405
Query: 142 MYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNF 201
+Y G + RV+ + RN+ WNA++S +N + +S F ++ +KPD
Sbjct: 406 LYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKG-IKPDYI 464
Query: 202 TFPCVIKACG--GIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
+F ++ ACG G+ D G V MA G+ + +I + G+ EE L E
Sbjct: 465 SFIAILTACGHTGMVDEGRNYFVL-MAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLE 523
Query: 260 VMPERNLVSWNSIICG 275
RN S ++ G
Sbjct: 524 RAECRNDASLWGVLLG 539
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 111/197 (56%), Gaps = 6/197 (3%)
Query: 116 GKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
GK VH EL Q ++ I + L+T+YS CG D+ VF S++ +++ W +L+SG
Sbjct: 392 GKSVHAELFKRPIQSTS--TIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGL 449
Query: 175 TKNELYTDVLSIFVELSSDTE-LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
KN + + L +F ++ D + LKPD+ V AC G+ + FG VHG K GL+
Sbjct: 450 CKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVL 509
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
+VFV ++LI +Y KC E +K+F M N+V+WNS+I +S N S DL M+
Sbjct: 510 NVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLML 569
Query: 294 GCEEGFIPDVITVVTVL 310
+G PD +++ +VL
Sbjct: 570 --SQGIFPDSVSITSVL 584
Score = 101 bits (251), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 124/245 (50%), Gaps = 9/245 (3%)
Query: 70 ITTLCEESKSLNKALSLLQENLHNAD-LKEATGVLL---QACGHEKDIEIGKRVHELVSA 125
I+ LC+ K +AL + + + D LK + ++ AC + + G +VH +
Sbjct: 446 ISGLCKNGK-FKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIK 504
Query: 126 STQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLS 185
+ N F+ + LI +YS CG P + +VF S+ T N+ WN+++S +++N L +
Sbjct: 505 TGLVLNVFV-GSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSID 563
Query: 186 IFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMY 245
+F L + PD+ + V+ A A + G +HG ++G+ D + NALI MY
Sbjct: 564 LF-NLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMY 622
Query: 246 GKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVIT 305
KC F + +F+ M ++L++WN +I G+ +G + L +M E PD +T
Sbjct: 623 VKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGES--PDDVT 680
Query: 306 VVTVL 310
++++
Sbjct: 681 FLSLI 685
Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 5/198 (2%)
Query: 114 EIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR-NLFQWNALVS 172
E GK++H + D + T LI MY G +D+ RVF ++ + N+ WN ++
Sbjct: 187 EEGKQIHGFM-LRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIV 245
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
GF + + L +++ L+ + +K + +F + AC + GFG +H KMGL
Sbjct: 246 GFGGSGICESSLDLYM-LAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLH 304
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
D +V +L++MY KC V E +F + ++ L WN+++ ++EN + + DL M
Sbjct: 305 NDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFM 364
Query: 293 MGCEEGFIPDVITVVTVL 310
++ +PD T+ V+
Sbjct: 365 R--QKSVLPDSFTLSNVI 380
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 4/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC ++ G+++H V ND + T L++MYS CG ++ VF + +
Sbjct: 279 LGACSQSENSGFGRQIHCDV-VKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKR 337
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L WNA+V+ + +N+ L +F + + L PD+FT VI C + +G VH
Sbjct: 338 LEIWNAMVAAYAENDYGYSALDLFGFMRQKSVL-PDSFTLSNVISCCSVLGLYNYGKSVH 396
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
K + + +AL+ +Y KC + +F+ M E+++V+W S+I G +NG
Sbjct: 397 AELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFK 456
Query: 284 ESFDLLIKMMGCEEGFIP--DVITVVT 308
E+ + M ++ P D++T VT
Sbjct: 457 EALKVFGDMKDDDDSLKPDSDIMTSVT 483
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD----- 157
LL+AC ++ GK +H V + D I T L+ MY CGF + +VFD
Sbjct: 66 LLKACSALTNLSYGKTIHGSVVV-LGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQS 124
Query: 158 --SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKA-CG-GI 213
+ R++ WN+++ G+ K + + + F + ++PD F+ V+ C G
Sbjct: 125 QSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLV-FGVRPDAFSLSIVVSVMCKEGN 183
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF-EVMPERNLVSWNSI 272
G +HG + L D F+ ALI MY K + ++F E+ + N+V WN +
Sbjct: 184 FRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVM 243
Query: 273 ICGFSENGFSCESFDLLI 290
I GF +G S DL +
Sbjct: 244 IVGFGGSGICESSLDLYM 261
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 168 NALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAA 227
N+ + + Y L ++ + + FTFP ++KAC + ++ +G +HG
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87
Query: 228 KMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE-------RNLVSWNSIICGF 276
+G D F++ +L+ MY KC F++ V++F+ + R++ WNS+I G+
Sbjct: 88 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGY 143
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 116/209 (55%), Gaps = 2/209 (0%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V L+ACG +++ G+ +H V +D + + LI MY CG +++ R+FD L+
Sbjct: 65 VALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEK 124
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ W+++VSGF KN + F + +++ PD T ++ AC +++ G
Sbjct: 125 PDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRC 184
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VHG + G D+ + N+L+ Y K +E V LF+++ E++++SW+++I + +NG
Sbjct: 185 VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGA 244
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ + MM ++G P+V TV+ VL
Sbjct: 245 AAEALLVFNDMM--DDGTEPNVATVLCVL 271
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 102/162 (62%), Gaps = 3/162 (1%)
Query: 150 LDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKA 209
+D+R++F + R+L+QWN L+ ++ + + +VL F + D E KPDNFT P +KA
Sbjct: 11 VDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE-KPDNFTLPVALKA 69
Query: 210 CGGIADVGFGSGVHGMAAKMGLIG-DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVS 268
CG + +V +G +HG K +G D++V ++LI MY KC + E +++F+ + + ++V+
Sbjct: 70 CGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVT 129
Query: 269 WNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
W+S++ GF +NG ++ + +M+ + PD +T++T++
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASD-VTPDRVTLITLV 170
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 106/208 (50%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ AC + +G+ VH V FSND + L+ Y+ ++ +F + +
Sbjct: 169 LVSACTKLSNSRLGRCVHGFV-IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEK 227
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+ +++ + +N + L +F ++ D +P+ T CV++AC D+ G
Sbjct: 228 DVISWSTVIACYVQNGAAAEALLVFNDMMDDGT-EPNVATVLCVLQACAAAHDLEQGRKT 286
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A + GL +V VS AL+ MY KC EE +F +P +++VSW ++I GF+ NG +
Sbjct: 287 HELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMA 346
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
S + +M E PD I +V VL
Sbjct: 347 HRSIEEF-SIMLLENNTRPDAILMVKVL 373
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 2/208 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+LQAC D+E G++ HEL + + ++T L+ MY C P ++ VF + +
Sbjct: 270 VLQACAAAHDLEQGRKTHEL-AIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRK 328
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W AL+SGFT N + + F + + +PD V+ +C + +
Sbjct: 329 DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCF 388
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K G + F+ +L+ +Y +C + K+F + ++ V W S+I G+ +G
Sbjct: 389 HSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKG 448
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ + M+ E P+ +T +++L
Sbjct: 449 TKALETFNHMVKSSE-VKPNEVTFLSIL 475
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L +C +E K H V SN FI L+ +YS CG ++ +VF+ + +
Sbjct: 372 VLGSCSELGFLEQAKCFHSYVIKYGFDSNPFI-GASLVELYSRCGSLGNASKVFNGIALK 430
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
+ W +L++G+ + T L F + +E+KP+ TF ++ AC
Sbjct: 431 DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSAC 478
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 124 bits (311), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 113/197 (57%), Gaps = 8/197 (4%)
Query: 117 KRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
K++H L+ QFS F+I T+LI S G +R+VFD L +F WNA++ G++
Sbjct: 38 KQIHARLLVLGLQFSG-FLI-TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+N + D L ++ + + PD+FTFP ++KAC G++ + G VH ++G DV
Sbjct: 96 RNNHFQDALLMYSNMQL-ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 236 FVSNALIAMYGKCAFVEEMVKLFE--VMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
FV N LIA+Y KC + +FE +PER +VSW +I+ +++NG E+ ++ +M
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR 214
Query: 294 GCEEGFIPDVITVVTVL 310
+ PD + +V+VL
Sbjct: 215 KMD--VKPDWVALVSVL 229
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 110/202 (54%), Gaps = 8/202 (3%)
Query: 111 KDIEIGKRVH-ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNA 169
+D++ G+ +H +V + D +I+ L TMY+ CG ++ +FD +K+ NL WNA
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLIS--LNTMYAKCGQVATAKILFDKMKSPNLILWNA 293
Query: 170 LVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKM 229
++SG+ KN + + +F E+ + +++PD + I AC + + ++ +
Sbjct: 294 MISGYAKNGYAREAIDMFHEMI-NKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS 352
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLL 289
DVF+S+ALI M+ KC VE +F+ +R++V W+++I G+ +G + E+ L
Sbjct: 353 DYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLY 412
Query: 290 IKMMGCEEGFI-PDVITVVTVL 310
M E G + P+ +T + +L
Sbjct: 413 RAM---ERGGVHPNDVTFLGLL 431
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 6/210 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-- 160
LL+AC +++G+ VH V F D + LI +Y+ C +R VF+ L
Sbjct: 125 LLKACSGLSHLQMGRFVHAQV-FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLP 183
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R + W A+VS + +N + L IF ++ ++KPD V+ A + D+ G
Sbjct: 184 ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK-MDVKPDWVALVSVLNAFTCLQDLKQGR 242
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H KMGL + + +L MY KC V LF+ M NL+ WN++I G+++NG
Sbjct: 243 SIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ E+ D+ +M+ + PD I++ + +
Sbjct: 303 YAREAIDMFHEMI--NKDVRPDTISITSAI 330
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 112/191 (58%), Gaps = 2/191 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ AC + + G+++H+ + ++ D I+N +++MY CG D+R VFD + R
Sbjct: 73 LICACSSSRSLAQGRKIHDHI-LNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 131
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
NL + ++++G+++N + + +++++ + +L PD F F +IKAC +DVG G +
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQE-DLVPDQFAFGSIIKACASSSDVGLGKQL 190
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K+ + NALIAMY + + + ++F +P ++L+SW+SII GFS+ GF
Sbjct: 191 HAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFE 250
Query: 283 CESFDLLIKMM 293
E+ L +M+
Sbjct: 251 FEALSHLKEML 261
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 122/234 (52%), Gaps = 5/234 (2%)
Query: 77 SKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIIN 136
++++ L +LQE+L + A G +++AC D+ +GK++H V + S+ I
Sbjct: 150 AEAIRLYLKMLQEDL--VPDQFAFGSIIKACASSSDVGLGKQLHAQV-IKLESSSHLIAQ 206
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
LI MY D+ RVF + ++L W+++++GF++ + LS E+ S
Sbjct: 207 NALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVF 266
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 256
P+ + F +KAC + +GS +HG+ K L G+ +L MY +C F+ +
Sbjct: 267 HPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARR 326
Query: 257 LFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ + + SWN II G + NG++ E+ + +M GFIPD I++ ++L
Sbjct: 327 VFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRS--SGFIPDAISLRSLL 378
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 120/233 (51%), Gaps = 7/233 (3%)
Query: 81 NKALSLLQENLHNADLKEATGVLLQACGHEKDIEI--GKRVHELVSASTQFSNDFIINTR 138
++A+S+ + + + +A + C K + + G ++H + F D +
Sbjct: 353 DEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYI-IKWGFLADLTVCNS 411
Query: 139 LITMYSLCGFPLDSRRVFDSLKTR-NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELK 197
L+TMY+ C +F+ + + WN +++ ++E ++L +F +L +E +
Sbjct: 412 LLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLF-KLMLVSECE 470
Query: 198 PDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 257
PD+ T +++ C I+ + GS VH + K GL + F+ N LI MY KC + + ++
Sbjct: 471 PDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRI 530
Query: 258 FEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F+ M R++VSW+++I G++++GF E+ L +M G P+ +T V VL
Sbjct: 531 FDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSA--GIEPNHVTFVGVL 581
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 150 LDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKA 209
L + V ++KT L N ++ K+ Y + L F ++ K T+ +I A
Sbjct: 19 LATSSVVSTIKTEELM--NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICA 76
Query: 210 CGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSW 269
C + G +H D ++N +++MYGKC + + ++F+ MPERNLVS+
Sbjct: 77 CSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSY 136
Query: 270 NSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
S+I G+S+NG E+ L +KM+ +E +PD
Sbjct: 137 TSVITGYSQNGQGAEAIRLYLKML--QEDLVPD 167
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 129/240 (53%), Gaps = 13/240 (5%)
Query: 73 LCEESKSLNKALSLLQENLHNADLKEAT-GVLLQACGHEKDIEIGKRVHE-LVSASTQFS 130
LCEE L + ++EN N E T G L+ AC + GK H LV + + S
Sbjct: 222 LCEEGLVL---FNRMREN--NVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELS 276
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
+ + T L+ MY CG ++RRVF+ +L W A++ G+T N + LS+F ++
Sbjct: 277 SCLV--TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM 334
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
E+KP+ T V+ CG I ++ G VHG++ K+G I D V+NAL+ MY KC
Sbjct: 335 KG-VEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQ 392
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +FE+ E+++V+WNSII GFS+NG E+ L +M E P+ +TV ++
Sbjct: 393 NRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN--SESVTPNGVTVASLF 450
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 109/207 (52%), Gaps = 5/207 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+AC +D++ GK++H + F N ++ T L+ MY+ CG + +VF+ + RN
Sbjct: 149 LKACTELQDLDNGKKIHCQLVKVPSFDN--VVLTGLLDMYAKCGEIKSAHKVFNDITLRN 206
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W ++++G+ KN+L + L +F + + L + +T+ +I AC ++ + G H
Sbjct: 207 VVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVL-GNEYTYGTLIMACTKLSALHQGKWFH 265
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G K G+ + +L+ MY KC + ++F +LV W ++I G++ NG
Sbjct: 266 GCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVN 325
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L KM G E P+ +T+ +VL
Sbjct: 326 EALSLFQKMKGVE--IKPNCVTIASVL 350
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 127/237 (53%), Gaps = 11/237 (4%)
Query: 79 SLNKALSLLQENLHNADLKE---ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
S+N+ALSL Q+ + ++K +L CG +++E+G+ VH L S + +
Sbjct: 323 SVNEALSLFQK-MKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGL-SIKVGIWDTNVA 380
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
N L+ MY+ C D++ VF+ +++ WN+++SGF++N + L +F ++S++
Sbjct: 381 NA-LVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSES- 438
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD--VFVSNALIAMYGKCAFVEE 253
+ P+ T + AC + + GS +H + K+G + V V AL+ Y KC +
Sbjct: 439 VTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQS 498
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ + E+N ++W+++I G+ + G + S +L +M+ ++ P+ T ++L
Sbjct: 499 ARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQK--PNESTFTSIL 553
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 81/161 (50%), Gaps = 2/161 (1%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D I T+L+++Y G+ D+R VFD + + + W ++ + N+ +V+ ++ +L
Sbjct: 75 DISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLY-DLL 133
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+ D+ F +KAC + D+ G +H K+ +V ++ L+ MY KC +
Sbjct: 134 MKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLT-GLLDMYAKCGEI 192
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ K+F + RN+V W S+I G+ +N E L +M
Sbjct: 193 KSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRM 233
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 3/162 (1%)
Query: 103 LLQACGHEKDIEIGKRVHEL-VSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
L AC + +G +H V S+ + T L+ Y+ CG P +R +FD+++
Sbjct: 449 LFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEE 508
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N W+A++ G+ K L +F E+ + KP+ TF ++ ACG V G
Sbjct: 509 KNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ-KPNESTFTSILSACGHTGMVNEGKK 567
Query: 222 V-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
M ++ M + +E+ + + E MP
Sbjct: 568 YFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMP 609
Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ GL+GD+ ++ L+++YG + ++ +F+ +PE + W ++ + N S
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 283 CES---FDLLIKMMGCEEGFIPDVI 304
E +DLL+K GF D I
Sbjct: 124 VEVVKLYDLLMK-----HGFRYDDI 143
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 118/209 (56%), Gaps = 4/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL AC ++ + G+RVH + T++ + TRL+ Y C D+R+V D +
Sbjct: 57 ALLNACLDKRALRDGQRVHAHM-IKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPE 115
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+N+ W A++S +++ ++ L++F E+ ++ KP+ FTF V+ +C + +G G
Sbjct: 116 KNVVSWTAMISRYSQTGHSSEALTVFAEMMR-SDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG+ K +FV ++L+ MY K ++E ++FE +PER++VS +II G+++ G
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ ++ ++ EG P+ +T ++L
Sbjct: 235 DEEALEMFHRLH--SEGMSPNYVTYASLL 261
Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 111/210 (52%), Gaps = 3/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+L +C + +GK++H L+ + + + + L+ MY+ G ++R +F+ L
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLI-VKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ A+++G+ + L + L +F L S+ + P+ T+ ++ A G+A + G
Sbjct: 216 ERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEG-MSPNYVTYASLLTALSGLALLDHGK 274
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H + L + N+LI MY KC + +LF+ MPER +SWN+++ G+S++G
Sbjct: 275 QAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHG 334
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E +L ++M E+ PD +T++ VL
Sbjct: 335 LGREVLELF-RLMRDEKRVKPDAVTLLAVL 363
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
++ LI MYS CG +RR+FD++ R WNA++ G++K+ L +VL +F + +
Sbjct: 290 VLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDE 349
Query: 194 TELKPDNFTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+KPD T V+ C G + D G +A + G ++ M G+ +
Sbjct: 350 KRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRI 409
Query: 252 EEMVKLFEVMPER 264
+E + + MP +
Sbjct: 410 DEAFEFIKRMPSK 422
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 203 FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 262
+ ++ AC + G VH K + ++ L+ YGKC +E+ K+ + MP
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 263 ERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+N+VSW ++I +S+ G S E+ + +MM + P+ T TVL
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK--PNEFTFATVL 160
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 133/273 (48%), Gaps = 15/273 (5%)
Query: 39 SLRSIFKEKSSLSLSAKTNNASTQGLHFLQ-EITTLCEESKSLNKALSLLQENLHNADLK 97
S +++F+E S S+ + T+ + L E L EE ++E + D+
Sbjct: 349 SAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE----------MEEEGISPDVY 398
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
T VL C + ++ GKRVHE + D ++ L+ MY+ CG ++ VF
Sbjct: 399 TVTAVL-NCCARYRLLDEGKRVHEWIK-ENDLGFDIFVSNALMDMYAKCGSMQEAELVFS 456
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
++ +++ WN ++ G++KN + LS+F L + PD T CV+ AC ++
Sbjct: 457 EMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFD 516
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G +HG + G D V+N+L+ MY KC + LF+ + ++LVSW +I G+
Sbjct: 517 KGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYG 576
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+GF E+ L +M + G D I+ V++L
Sbjct: 577 MHGFGKEAIALFNQMR--QAGIEADEISFVSLL 607
Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 147/300 (49%), Gaps = 16/300 (5%)
Query: 14 PLFPSLRQKKSQPQFPATVIQRNKHSLRSIFKEKSSLS-LSAKTNNASTQGLHFLQEITT 72
P + ++ +S + VI N+ SLR++ S++ +A+TQ F
Sbjct: 19 PHLQNQKEIRSGVRVRKYVIF-NRASLRTVSDCVDSITTFDRSVTDANTQLRRFC----- 72
Query: 73 LCEESKSLNKALSLL-QENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSN 131
ES +L A+ LL + D + VL Q C K ++ GK V + + F
Sbjct: 73 ---ESGNLENAVKLLCVSGKWDIDPRTLCSVL-QLCADSKSLKDGKEVDNFIRGNG-FVI 127
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D + ++L MY+ CG ++ RVFD +K WN L++ K+ ++ + +F ++
Sbjct: 128 DSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM 187
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
S + ++ D++TF CV K+ + V G +HG K G V N+L+A Y K V
Sbjct: 188 S-SGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRV 246
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ K+F+ M ER+++SWNSII G+ NG + + + ++M+ G D+ T+V+V
Sbjct: 247 DSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQML--VSGIEIDLATIVSVFA 304
Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 8/202 (3%)
Query: 111 KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDS-RRVFDSLKTRNLFQWNA 169
+ + G+++H + S F + L+ Y L +DS R+VFD + R++ WN+
Sbjct: 209 RSVHGGEQLHGFILKSG-FGERNSVGNSLVAFY-LKNQRVDSARKVFDEMTERDVISWNS 266
Query: 170 LVSGFTKNELYTDVLSIFVE-LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK 228
+++G+ N L LS+FV+ L S E+ D T V C + G VH + K
Sbjct: 267 IINGYVSNGLAEKGLSVFVQMLVSGIEI--DLATIVSVFAGCADSRLISLGRAVHSIGVK 324
Query: 229 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL 288
+ N L+ MY KC ++ +F M +R++VS+ S+I G++ G + E+ L
Sbjct: 325 ACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKL 384
Query: 289 LIKMMGCEEGFIPDVITVVTVL 310
+M EEG PDV TV VL
Sbjct: 385 FEEME--EEGISPDVYTVTAVL 404
>sp|Q9MA95|PP214_ARATH Putative pentatricopeptide repeat-containing protein At3g05240
OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2
Length = 565
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 126/244 (51%), Gaps = 14/244 (5%)
Query: 77 SKSLNKALSLLQENLHNADLKE--ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFI 134
S + +KAL QE L + +L+AC +DI+ G VH V T F +
Sbjct: 85 SPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFV-VKTGFEVNMY 143
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
++T L+ MY CG RVF+ + N+ W +L+SGF N ++D + F E+ S+
Sbjct: 144 VSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNG 203
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL-------IG-DVFVSNALIAMYG 246
+K + ++ ACG D+ G HG +G +G +V ++ +LI MY
Sbjct: 204 -VKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYA 262
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
KC + LF+ MPER LVSWNSII G+S+NG + E+ + + M+ + G PD +T
Sbjct: 263 KCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDML--DLGIAPDKVTF 320
Query: 307 VTVL 310
++V+
Sbjct: 321 LSVI 324
Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 11/216 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSA-------STQFSNDFIINTRLITMYSLCGFPLDSRRV 155
LL ACG KDI GK H + ++ + I+ T LI MY+ CG +R +
Sbjct: 214 LLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYL 273
Query: 156 FDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIAD 215
FD + R L WN++++G+++N + L +F+++ D + PD TF VI+A
Sbjct: 274 FDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDML-DLGIAPDKVTFLSVIRASMIQGC 332
Query: 216 VGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 275
G +H +K G + D + AL+ MY K E K FE + +++ ++W +I G
Sbjct: 333 SQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIG 392
Query: 276 FSENGFSCESFDLLIKMMGCEEG-FIPDVITVVTVL 310
+ +G E+ + +M E+G PD IT + VL
Sbjct: 393 LASHGHGNEALSIFQRMQ--EKGNATPDGITYLGVL 426
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 93/165 (56%), Gaps = 5/165 (3%)
Query: 118 RVHELVSASTQFSNDFIINTRLITMYSLCGFPLD---SRRVFDSLKTRNLFQWNALVSGF 174
++H L+ S+ N I +RLI + C ++ +R VF+S+ +++ WN+++ G+
Sbjct: 24 QLHGLMIKSSVIRN-VIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGY 82
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
+ N D IF + PD FTFP V+KAC G+ D+ FGS VHG K G +
Sbjct: 83 S-NSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVN 141
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
++VS L+ MY C V +++FE +P+ N+V+W S+I GF N
Sbjct: 142 MYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNN 186
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 10/181 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++Q C ++G+ +H VS T F D I L+ MY+ G +++ F+ L+ +
Sbjct: 328 MIQGCS-----QLGQSIHAYVS-KTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKK 381
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W ++ G + + LSIF + PD T+ V+ AC I V G
Sbjct: 382 DTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRY 441
Query: 223 HG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSII--CGFSE 278
M GL V ++ + + EE +L + MP + N+ W +++ C E
Sbjct: 442 FAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHE 501
Query: 279 N 279
N
Sbjct: 502 N 502
>sp|Q9C9I3|PP115_ARATH Pentatricopeptide repeat-containing protein At1g71460,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-A3 PE=2
SV=1
Length = 689
Score = 121 bits (304), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 146/305 (47%), Gaps = 24/305 (7%)
Query: 13 SPLFPSLRQKKSQPQFPATVIQRNKHSLRSIFKEKSSLSLSAKTNNASTQGLHFLQEITT 72
SP+ PS ++ P+T + R SSL L +K + +
Sbjct: 38 SPIRPSRTRR------PSTSPAKKPKPFRERDAFPSSLPLHSKNP-------YIIHRDIQ 84
Query: 73 LCEESKSLNKALSLLQENLHNADLKEAT--GVLLQACGHEKDIEIGKRVHELVSASTQFS 130
+ +L AL++L AT LL+AC K + GK+VH + + S
Sbjct: 85 IFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLES 144
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSG--FTKNELYTDVLSIFV 188
N+F+ T+L+ MY+ CG D+++VFD + N++ WNAL+ G + + Y DVLS F
Sbjct: 145 NEFL-RTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFT 203
Query: 189 ELSSDTELKPD--NFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYG 246
E+ EL D ++ V K+ G + + G H +A K GL VF+ +L+ MY
Sbjct: 204 EMR---ELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYF 260
Query: 247 KCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITV 306
KC V ++F+ + ER++V W ++I G + N E+ L + M EE P+ + +
Sbjct: 261 KCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLF-RTMISEEKIYPNSVIL 319
Query: 307 VTVLP 311
T+LP
Sbjct: 320 TTILP 324
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 4/197 (2%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G + H L + F N + T L+ MY CG +RRVFD + R++ W A+++G
Sbjct: 233 GLKTHALAIKNGLF-NSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLA 291
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAK-MGLIGD 234
N+ + L +F + S+ ++ P++ ++ G + + G VH K +
Sbjct: 292 HNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQ 351
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
FV + LI +Y KC + ++F +RN +SW +++ G++ NG ++ ++ M
Sbjct: 352 PFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQ- 410
Query: 295 CEEGFIPDVITVVTVLP 311
+EGF PDV+T+ TVLP
Sbjct: 411 -QEGFRPDVVTIATVLP 426
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 1/177 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L G K +++GK VH V S + +++ LI +Y CG RRVF K R
Sbjct: 322 ILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQR 381
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N W AL+SG+ N + L V + + +PD T V+ C + + G +
Sbjct: 382 NAISWTALMSGYAANGRFDQALRSIVWMQQEG-FRPDVVTIATVLPVCAELRAIKQGKEI 440
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
H A K + +V + +L+ MY KC E ++LF+ + +RN+ +W ++I + EN
Sbjct: 441 HCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVEN 497
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLIT----MYSLCGFPLDSRRVF 156
+L C + I+ GK +H N F+ N L+T MYS CG P R+F
Sbjct: 422 ATVLPVCAELRAIKQGKEIH-----CYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLF 476
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
D L+ RN+ W A++ + +N + +F L ++ +PD+ T V+ C + +
Sbjct: 477 DRLEQRNVKAWTAMIDCYVENCDLRAGIEVF-RLMLLSKHRPDSVTMGRVLTVCSDLKAL 535
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G +HG K FVS +I MYGKC + F+ + + ++W +II +
Sbjct: 536 KLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAY 595
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
N ++ + +M+ GF P+ T VL
Sbjct: 596 GCNELFRDAINCFEQMVS--RGFTPNTFTFTAVL 627
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 121 bits (303), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 113/208 (54%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+A + + K++H L+ + D + LI +YS C DSR VFD +K +
Sbjct: 460 LLRASASLTSLGLSKQIHGLM-FKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK 518
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN++ +G+ + + L++F+EL E +PD FTF ++ A G +A V G
Sbjct: 519 DLVIWNSMFAGYVQQSENEEALNLFLELQLSRE-RPDEFTFANMVTAAGNLASVQLGQEF 577
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K GL + +++NAL+ MY KC E+ K F+ R++V WNS+I ++ +G
Sbjct: 578 HCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEG 637
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L KMM EG P+ IT V VL
Sbjct: 638 KKALQMLEKMM--SEGIEPNYITFVGVL 663
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 109/209 (52%), Gaps = 3/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E GK++H + + ++N LI Y CG + + ++F+ + +
Sbjct: 255 VLSACSILPFLEGGKQIHAHILRYGLEMDASLMNV-LIDSYVKCGRVIAAHKLFNGMPNK 313
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W L+SG+ +N L+ + + +F +S LKPD + ++ +C + +GFG+ V
Sbjct: 314 NIISWTTLLSGYKQNALHKEAMELFTSMSK-FGLKPDMYACSSILTSCASLHALGFGTQV 372
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K L D +V+N+LI MY KC + + K+F++ ++V +N++I G+S G
Sbjct: 373 HAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQ 432
Query: 283 CESFDLLIKMMGCEEGFI-PDVITVVTVL 310
E + L I P ++T V++L
Sbjct: 433 WELHEALNIFRDMRFRLIRPSLLTFVSLL 461
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 9/216 (4%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A +L +C + G +VH + ND + LI MY+ C D+R+VFD
Sbjct: 352 ACSSILTSCASLHALGFGTQVHA-YTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDI 410
Query: 159 LKTRNLFQWNALVSGF----TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
++ +NA++ G+ T+ EL+ + L+IF ++ ++P TF +++A +
Sbjct: 411 FAAADVVLFNAMIEGYSRLGTQWELH-EALNIFRDMRFRL-IRPSLLTFVSLLRASASLT 468
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+G +HG+ K GL D+F +ALI +Y C +++ +F+ M ++LV WNS+
Sbjct: 469 SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFA 528
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G+ + + E+ +L +++ E PD T ++
Sbjct: 529 GYVQQSENEEALNLFLELQLSRER--PDEFTFANMV 562
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 3/182 (1%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F D + T LI Y G +R VFD+L ++ W ++SG K L +F
Sbjct: 179 FDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFY 238
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
+L D + PD + V+ AC + + G +H + GL D + N LI Y KC
Sbjct: 239 QLMEDN-VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKC 297
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
V KLF MP +N++SW +++ G+ +N E+ +L M + G PD+ +
Sbjct: 298 GRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM--SKFGLKPDMYACSS 355
Query: 309 VL 310
+L
Sbjct: 356 IL 357
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 4/181 (2%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELS 191
D ++ LI +YS G + +R+VF+ + RNL W+ +VS + +Y + L +F+E
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGS--GVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
+ P+ + I+AC G+ G + K G DV+V LI Y K
Sbjct: 138 RTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDG 197
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
++ +F+ +PE++ V+W ++I G + G S S L ++M E+ +PD + TV
Sbjct: 198 NIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM--EDNVVPDGYILSTV 255
Query: 310 L 310
L
Sbjct: 256 L 256
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 88/179 (49%), Gaps = 3/179 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ A G+ +++G+ H + N +I N L+ MY+ CG P D+ + FDS +R
Sbjct: 561 MVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNA-LLDMYAKCGSPEDAHKAFDSAASR 619
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+++S + + L + ++ S+ ++P+ TF V+ AC V G
Sbjct: 620 DVVCWNSVISSYANHGEGKKALQMLEKMMSEG-IEPNYITFVGVLSACSHAGLVEDGLKQ 678
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSENG 280
+ + G+ + ++++ G+ + + +L E MP + + W S++ G ++ G
Sbjct: 679 FELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAG 737
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VHG GL D ++SN LI +Y + + K+FE MPERNLVSW++++ + +G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 282 SCESF 286
ES
Sbjct: 126 YEESL 130
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 119/210 (56%), Gaps = 5/210 (2%)
Query: 103 LLQACGHE-KDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL+ C + K + K VH+ + + D ++ LI +Y C +R VF++
Sbjct: 9 LLRECTNSTKSLRRIKLVHQRI-LTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 67
Query: 162 R-NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R +++ WN+L+SG++KN ++ D L +F L + + PD+FTFP VIKA G + G
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H + K G + DV V+++L+ MY K E +++F+ MPER++ SWN++I F ++G
Sbjct: 128 MIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSG 187
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ ++ +L +M GF P+ +++ +
Sbjct: 188 EAEKALELFGRMES--SGFEPNSVSLTVAI 215
Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 106/196 (54%), Gaps = 4/196 (2%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
+G+ +H LV S + D ++ + L+ MY+ +S +VFD + R++ WN ++S F
Sbjct: 125 LGRMIHTLVVKSG-YVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCF 183
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
++ L +F + S + +P++ + I AC + + G +H K G D
Sbjct: 184 YQSGEAEKALELFGRMES-SGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELD 242
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
+V++AL+ MYGKC +E ++F+ MP ++LV+WNS+I G+ G S ++L +M+
Sbjct: 243 EYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI- 301
Query: 295 CEEGFIPDVITVVTVL 310
EG P T+ ++L
Sbjct: 302 -IEGTRPSQTTLTSIL 316
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 10/211 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +++ GK +H V S + D +N LI +Y CG + VF +
Sbjct: 315 ILMACSRSRNLLHGKFIHGYVIRSV-VNADIYVNCSLIDLYFKCGEANLAETVFSKTQKD 373
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
WN ++S + + + ++ ++ S +KPD TF V+ AC +A + G +
Sbjct: 374 VAESWNVMISSYISVGNWFKAVEVYDQMVS-VGVKPDVVTFTSVLPACSQLAALEKGKQI 432
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H ++ L D + +AL+ MY KC +E ++F +P++++VSW +I + +G
Sbjct: 433 HLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQP 492
Query: 283 CES---FDLLIKMMGCEEGFIPDVITVVTVL 310
E+ FD + K G PD +T++ VL
Sbjct: 493 REALYQFDEMQKF-----GLKPDGVTLLAVL 518
Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 4/210 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V + AC +E GK +H F D +N+ L+ MY C +R VF +
Sbjct: 213 VAISACSRLLWLERGKEIHRKC-VKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPR 271
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++L WN+++ G+ + I + + +P T ++ AC ++ G
Sbjct: 272 KSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT-RPSQTTLTSILMACSRSRNLLHGKF 330
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG + + D++V+ +LI +Y KC +F + SWN +I + G
Sbjct: 331 IHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGN 390
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ ++ +M+ G PDV+T +VLP
Sbjct: 391 WFKAVEVYDQMVSV--GVKPDVVTFTSVLP 418
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 5/163 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E GK++H +S S + D ++ + L+ MYS CG ++ R+F+S+ +
Sbjct: 416 VLPACSQLAALEKGKQIHLSISES-RLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK 474
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACG--GIADVGFGS 220
++ W ++S + + + L F E+ LKPD T V+ ACG G+ D G
Sbjct: 475 DVVSWTVMISAYGSHGQPREALYQFDEMQK-FGLKPDGVTLLAVLSACGHAGLIDEGL-K 532
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 263
M +K G+ + + +I + G+ + E ++ + PE
Sbjct: 533 FFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPE 575
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 118/215 (54%), Gaps = 7/215 (3%)
Query: 97 KEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 156
+ +LL+ C K++ +++ LV + + F T+L++++ G ++ RVF
Sbjct: 37 EHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFF-QTKLVSLFCRYGSVDEAARVF 92
Query: 157 DSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADV 216
+ + ++ ++ ++ GF K L FV + D +++P + F ++K CG A++
Sbjct: 93 EPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD-DVEPVVYNFTYLLKVCGDEAEL 151
Query: 217 GFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G +HG+ K G D+F L MY KC V E K+F+ MPER+LVSWN+I+ G+
Sbjct: 152 RVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGY 211
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
S+NG + + +++ M CEE P IT+V+VLP
Sbjct: 212 SQNGMARMALEMVKSM--CEENLKPSFITIVSVLP 244
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 116/208 (55%), Gaps = 6/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC D+E G+ +H+L N ++N+ LI+MY C + +F L++R
Sbjct: 344 LHACADLGDLERGRFIHKLSVELGLDRNVSVVNS-LISMYCKCKEVDTAASMFGKLQSRT 402
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
L WNA++ GF +N D L+ F ++ S T +KPD FT+ VI A ++ +H
Sbjct: 403 LVSWNAMILGFAQNGRPIDALNYFSQMRSRT-VKPDTFTYVSVITAIAELSITHHAKWIH 461
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G+ + L +VFV+ AL+ MY KC + +F++M ER++ +WN++I G+ +GF
Sbjct: 462 GVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGK 521
Query: 284 ESFDLLIKMMGCEEGFI-PDVITVVTVL 310
+ +L +M ++G I P+ +T ++V+
Sbjct: 522 AALELFEEM---QKGTIKPNGVTFLSVI 546
Score = 114 bits (285), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 124/232 (53%), Gaps = 6/232 (2%)
Query: 79 SLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
+L S+ +ENL + + + +L A + I +GK +H S F + I+T
Sbjct: 220 ALEMVKSMCEENLKPSFITIVS--VLPAVSALRLISVGKEIHGYAMRSG-FDSLVNISTA 276
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+ MY+ CG +R++FD + RN+ WN+++ + +NE + + IF ++ D +KP
Sbjct: 277 LVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML-DEGVKP 335
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+ + + AC + D+ G +H ++ ++GL +V V N+LI+MY KC V+ +F
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF 395
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ R LVSWN++I GF++NG ++ + +M PD T V+V+
Sbjct: 396 GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS--RTVKPDTFTYVSVI 445
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
K +H +V S N F+ T L+ MY+ CG + +R +FD + R++ WNA++ G+
Sbjct: 457 AKWIHGVVMRSCLDKNVFV-TTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 515
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGF 218
+ L +F E+ T +KP+ TF VI AC G+ + G
Sbjct: 516 THGFGKAALELFEEMQKGT-IKPNGVTFLSVISACSHSGLVEAGL 559
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 127/236 (53%), Gaps = 6/236 (2%)
Query: 75 EESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFI 134
E+++++ S+L E + + A+ +L +CG+ KDI GK +H L+ S F +
Sbjct: 247 EDTEAVKAFQSMLVEKVQPNEYTYAS--VLISCGNLKDIGNGKLIHGLMVKSG-FESALA 303
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
T L+TMY C DS RVF ++ N W +L+SG +N L F ++ D+
Sbjct: 304 SQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDS 363
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+KP++FT ++ C +A G +HG+ K G D + + LI +YGKC +
Sbjct: 364 -IKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMA 422
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+F+ + E +++S N++I +++NGF E+ DL +M+ G P+ +TV++VL
Sbjct: 423 RLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINL--GLQPNDVTVLSVL 476
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 4/178 (2%)
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
I ++L+ CG +R+VFD + R++ WN+L++ K+ + + ++ + ++
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL-IGDVFVSNALIAMYGKCAFVE 252
L PD +T V KA ++ HG+A +GL + +VFV +AL+ MY K
Sbjct: 160 NVL-PDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTR 218
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E + + + E+++V ++I G+S+ G E+ M+ E P+ T +VL
Sbjct: 219 EAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSML--VEKVQPNEYTYASVL 274
>sp|O64705|PP184_ARATH Pentatricopeptide repeat-containing protein At2g34400
OS=Arabidopsis thaliana GN=PCMP-E23 PE=3 SV=2
Length = 621
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 113/208 (54%), Gaps = 7/208 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC H D+ G+ + E+ + + + + ++LI+MY CG +RRVF+ + +
Sbjct: 239 MLGACSHLGDLRTGRLLEEM-AITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKK 297
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ W A+++ +++N ++ +F E+ T + PD T V+ ACG + + G +
Sbjct: 298 DRVAWTAMITVYSQNGKSSEAFKLFFEMEK-TGVSPDAGTLSTVLSACGSVGALELGKQI 356
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
A+++ L +++V+ L+ MYGKC VEE +++FE MP +N +WN++I ++ G +
Sbjct: 357 ETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHA 416
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ L +M P IT + VL
Sbjct: 417 KEALLLFDRM-----SVPPSDITFIGVL 439
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 113/207 (54%), Gaps = 8/207 (3%)
Query: 106 ACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLF 165
AC ++I +G+ VH + D IN LI MY+ CG +R++FD + R+
Sbjct: 141 ACAKLEEIGVGRSVHSSL-FKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTV 199
Query: 166 QWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGM 225
WN+++SG+++ D + +F ++ + +PD T ++ AC + D+ G + M
Sbjct: 200 SWNSMISGYSEAGYAKDAMDLFRKMEEEG-FEPDERTLVSMLGACSHLGDLRTGRLLEEM 258
Query: 226 A--AKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
A K+GL F+ + LI+MYGKC ++ ++F M +++ V+W ++I +S+NG S
Sbjct: 259 AITKKIGL--STFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSS 316
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+F L +M + G PD T+ TVL
Sbjct: 317 EAFKLFFEME--KTGVSPDAGTLSTVL 341
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 92/157 (58%), Gaps = 4/157 (2%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKN-ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGI 213
+F + N + +N ++ G T + LS++ + + LKPD FT+ V AC +
Sbjct: 87 LFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKF-SGLKPDKFTYNFVFIACAKL 145
Query: 214 ADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 273
++G G VH K+GL DV ++++LI MY KC V KLF+ + ER+ VSWNS+I
Sbjct: 146 EEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMI 205
Query: 274 CGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G+SE G++ ++ DL KM EEGF PD T+V++L
Sbjct: 206 SGYSEAGYAKDAMDLFRKME--EEGFEPDERTLVSML 240
>sp|Q9ZUT4|PP192_ARATH Pentatricopeptide repeat-containing protein At2g37320
OS=Arabidopsis thaliana GN=PCMP-E50 PE=2 SV=1
Length = 500
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 115/207 (55%), Gaps = 3/207 (1%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
+++CG +D G H L + F +D + + L+ +Y G ++ +VF+ + RN
Sbjct: 127 VRSCGLNRDFRTGSGFHCL-ALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERN 185
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ W A++SGF + L ++ ++ T P+++TF ++ AC G +G G VH
Sbjct: 186 VVSWTAMISGFAQEWRVDICLKLYSKMRKSTS-DPNDYTFTALLSACTGSGALGQGRSVH 244
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
MGL + +SN+LI+MY KC +++ ++F+ +++VSWNS+I G++++G +
Sbjct: 245 CQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAM 304
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L MM + G PD IT + VL
Sbjct: 305 QAIELFELMMP-KSGTKPDAITYLGVL 330
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 65/109 (59%), Gaps = 6/109 (5%)
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPC-----VIKACGGIADVGFGSGVHGMAAKM 229
TKN + + + + +E SS + +K D ++F +++CG D GSG H +A K
Sbjct: 91 TKNGVSSVLEEVMLEDSS-SSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKG 149
Query: 230 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSE 278
G I DV++ ++L+ +Y VE K+FE MPERN+VSW ++I GF++
Sbjct: 150 GFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQ 198
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL AC + G+ VH + + I+ LI+MY CG D+ R+FD
Sbjct: 226 ALLSACTGSGALGQGRSVH-CQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSN 284
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+++ WN++++G+ ++ L + +F + + KPD T+ V+ +C V G
Sbjct: 285 KDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRK 344
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER-NLVSWNSIICGFSENG 280
+ A+ GL ++ + L+ + G+ ++E ++L E MP + N V W S++
Sbjct: 345 FFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL------- 397
Query: 281 FSCESF-DLLIKMMGCEEGFI--PD 302
FSC D+ + EE + PD
Sbjct: 398 FSCRVHGDVWTGIRAAEERLMLEPD 422
>sp|Q9ZUT5|PP191_ARATH Pentatricopeptide repeat-containing protein At2g37310
OS=Arabidopsis thaliana GN=PCMP-E49 PE=2 SV=1
Length = 657
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 103/188 (54%), Gaps = 11/188 (5%)
Query: 132 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE-- 189
D + ++LI+ Y+ + VFD + RN F +NAL+ +T E+Y D S+F+
Sbjct: 56 DNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWI 115
Query: 190 ----LSSDTELKPDNFTFPCVIKACGGIADVGFGS---GVHGMAAKMGLIGDVFVSNALI 242
SSD +PD+ + CV+KA G D GS VHG + G DVFV N +I
Sbjct: 116 GSSCYSSDAA-RPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMI 174
Query: 243 AMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPD 302
Y KC +E K+F+ M ER++VSWNS+I G+S++G + + M+ C + F P+
Sbjct: 175 TYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSD-FKPN 233
Query: 303 VITVVTVL 310
+TV++V
Sbjct: 234 GVTVISVF 241
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 97/178 (54%), Gaps = 1/178 (0%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
+ ++VH V F +D + +IT Y+ C +R+VFD + R++ WN+++SG+
Sbjct: 150 LARQVHGFV-IRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGY 208
Query: 175 TKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGD 234
+++ + D ++ + + ++ KP+ T V +ACG +D+ FG VH + + D
Sbjct: 209 SQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMD 268
Query: 235 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+ + NA+I Y KC ++ LF+ M E++ V++ +II G+ +G E+ L +M
Sbjct: 269 LSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEM 326
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 106/242 (43%), Gaps = 41/242 (16%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ QACG D+ G VH+ + D + +I Y+ CG +R +FD + +
Sbjct: 240 VFQACGQSSDLIFGLEVHKKM-IENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK 298
Query: 163 N-------------------------------LFQWNALVSGFTKNELYTDVLSIFVELS 191
+ L WNA++SG +N + +V++ F E+
Sbjct: 299 DSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMI 358
Query: 192 SDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 251
+P+ T ++ + +++ G +H A + G +++V+ ++I Y K F+
Sbjct: 359 R-CGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFL 417
Query: 252 EEMVKLFEVMPERNLVSWNSIICGFSENGFS---CESFDLLIKMMGCEEGFIPDVITVVT 308
++F+ +R+L++W +II ++ +G S C FD M C G PD +T+
Sbjct: 418 LGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFD----QMQC-LGTKPDDVTLTA 472
Query: 309 VL 310
VL
Sbjct: 473 VL 474
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 119/285 (41%), Gaps = 37/285 (12%)
Query: 41 RSIFKE---KSSLSLSAKTNNASTQGLHFLQEITTLCEESKSL-----NKALSLLQENLH 92
R++F E K S++ A + GL ++E L E +S+ N +S L +N H
Sbjct: 289 RALFDEMSEKDSVTYGAIISGYMAHGL--VKEAMALFSEMESIGLSTWNAMISGLMQNNH 346
Query: 93 NADLKEATGVLLQACG----------------HEKDIEIGKRVHELVSASTQFSNDFIIN 136
+ ++ + +++ CG + +++ GK +H + N+ +
Sbjct: 347 HEEVINSFREMIR-CGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAF-AIRNGADNNIYVT 404
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTEL 196
T +I Y+ GF L ++RVFD+ K R+L W A+++ + + S+F ++
Sbjct: 405 TSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQC-LGT 463
Query: 197 KPDNFTFPCVIKACGGIADVGFGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
KPD+ T V+ A D + M K + V ++++ + + + +
Sbjct: 464 KPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAM 523
Query: 256 KLFEVMPERNLVS-WNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
+ MP + W +++ G S G DL I C+ F
Sbjct: 524 EFISKMPIDPIAKVWGALLNGASVLG------DLEIARFACDRLF 562
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 109/211 (51%), Gaps = 6/211 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC + GK+VH + F D +N LI +Y CG +R+VFD + R
Sbjct: 157 VLKACAYIFGFSEGKQVHCQI-VKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPER 215
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+L WN+++ + Y L +F E+ E PD +T V+ AC G+ + G+
Sbjct: 216 SLVSWNSMIDALVRFGEYDSALQLFREMQRSFE--PDGYTMQSVLSACAGLGSLSLGTWA 273
Query: 223 HGMAAK---MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
H + + + DV V N+LI MY KC + ++F+ M +R+L SWN++I GF+ +
Sbjct: 274 HAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATH 333
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + E+ + +M+ E P+ +T V +L
Sbjct: 334 GRAEEAMNFFDRMVDKRENVRPNSVTFVGLL 364
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 82/158 (51%), Gaps = 4/158 (2%)
Query: 154 RVFDSLKTRNLFQWNALVSGFTKN-ELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
RVFDS++ + F WN L+ + + ++ ++ E PD TFP V+KAC
Sbjct: 104 RVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAY 163
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
I G VH K G GDV+V+N LI +YG C ++ K+F+ MPER+LVSWNS+
Sbjct: 164 IFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSM 223
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I G + L +M + F PD T+ +VL
Sbjct: 224 IDALVRFGEYDSALQLFREM---QRSFEPDGYTMQSVL 258
>sp|Q9FK33|PP427_ARATH Pentatricopeptide repeat-containing protein At5g50390,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H58 PE=2
SV=1
Length = 701
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 109/193 (56%), Gaps = 8/193 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L++AC K I KRV+ + ++ +++N R++ M+ CG +D+RR+FD + R
Sbjct: 129 LVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMN-RILLMHVKCGMIIDARRLFDEIPER 187
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFV---ELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
NL+ + +++SGF Y + +F E SD E TF +++A G+ + G
Sbjct: 188 NLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCE----THTFAVMLRASAGLGSIYVG 243
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H A K+G++ + FVS LI MY KC +E+ FE MPE+ V+WN++I G++ +
Sbjct: 244 KQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALH 303
Query: 280 GFSCESFDLLIKM 292
G+S E+ LL M
Sbjct: 304 GYSEEALCLLYDM 316
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 101/210 (48%), Gaps = 4/210 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
V+L+A I +GK++H N F+ + LI MYS CG D+R F+ +
Sbjct: 228 AVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFV-SCGLIDMYSKCGDIEDARCAFECMP 286
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
+ WN +++G+ + + L + ++ D+ + D FT +I+ +A +
Sbjct: 287 EKTTVAWNNVIAGYALHGYSEEALCLLYDMR-DSGVSIDQFTLSIMIRISTKLAKLELTK 345
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H + G ++ + AL+ Y K V+ +F+ +P +N++SWN+++ G++ +G
Sbjct: 346 QAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHG 405
Query: 281 FSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ L KM+ P+ +T + VL
Sbjct: 406 RGTDAVKLFEKMIAA--NVAPNHVTFLAVL 433
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
T+ +++AC + + V+G G + ++ N ++ M+ KC + + +LF+ +
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
PERNL S+ SII GF G E+F+L KMM
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELF-KMM 215
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 118 bits (295), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 99/176 (56%), Gaps = 3/176 (1%)
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
++T L T+YS +R++FD ++L WNA++SG+T+N L D +S+F E+ +
Sbjct: 356 VSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQK-S 414
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
E P+ T C++ AC + + G VH + ++VS ALI MY KC + E
Sbjct: 415 EFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEA 474
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+LF++M ++N V+WN++I G+ +G E+ ++ +M+ G P +T + VL
Sbjct: 475 RRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN--SGITPTPVTFLCVL 528
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 1/183 (0%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F ND + T+L S G +R +F S++ ++F +N L+ GF+ NE LS+F
Sbjct: 48 FRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFA 107
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
L T+LKP++ T+ I A G D G +HG A G ++ + + ++ MY K
Sbjct: 108 HLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKF 167
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
VE+ K+F+ MPE++ + WN++I G+ +N ES + ++ E D T++
Sbjct: 168 WRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLIN-ESCTRLDTTTLLD 226
Query: 309 VLP 311
+LP
Sbjct: 227 ILP 229
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 89/163 (54%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
++ ++ + ++ MY D+R+VFD + ++ WN ++SG+ KNE+Y + + +F +L
Sbjct: 152 SELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL 211
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
+++ + D T ++ A + ++ G +H +A K G +V I++Y KC
Sbjct: 212 INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
++ LF + ++V++N++I G++ NG + S L ++M
Sbjct: 272 IKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELM 314
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 117 bits (294), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 122/229 (53%), Gaps = 12/229 (5%)
Query: 87 LQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC 146
+Q + D+ TG LL AC E+ GK +H +V N LI+MY
Sbjct: 296 MQRHWVETDIYTYTG-LLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNA-LISMY--I 351
Query: 147 GFPL----DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFT 202
FP D+ +F+SLK+++L WN++++GF + L D + F L S +E+K D++
Sbjct: 352 QFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRS-SEIKVDDYA 410
Query: 203 FPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF-EVM 261
F ++++C +A + G +H +A K G + + FV ++LI MY KC +E K F ++
Sbjct: 411 FSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQIS 470
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ + V+WN++I G++++G S DL +M C + D +T +L
Sbjct: 471 SKHSTVAWNAMILGYAQHGLGQVSLDLFSQM--CNQNVKLDHVTFTAIL 517
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 131 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVEL 190
+D ++ R++ Y GF + +FD + R+ WN ++SG+T D +F +
Sbjct: 33 SDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCM 92
Query: 191 SSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 250
D ++F ++K + G VHG+ K G +V+V ++L+ MY KC
Sbjct: 93 KRSGS-DVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCER 151
Query: 251 VEEMVKLFEVMPERNLVSWNSIICGF 276
VE+ + F+ + E N VSWN++I GF
Sbjct: 152 VEDAFEAFKEISEPNSVSWNALIAGF 177
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 2/191 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+ K ++G++VH LV N ++ + L+ MY+ C D+ F +
Sbjct: 107 LLKGIASVKRFDLGEQVHGLVIKGGYECNVYV-GSSLVDMYAKCERVEDAFEAFKEISEP 165
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N WNAL++GF + + + + D TF ++ V
Sbjct: 166 NSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQV 225
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGFSENGF 281
H K+GL ++ + NA+I+ Y C V + ++F+ + ++L+SWNS+I GFS++
Sbjct: 226 HAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHEL 285
Query: 282 SCESFDLLIKM 292
+F+L I+M
Sbjct: 286 KESAFELFIQM 296
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
H A K G I D++VSN ++ Y K F+ LF+ MP+R+ VSWN++I G++ G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
>sp|O23491|PP315_ARATH Pentatricopeptide repeat-containing protein At4g16470
OS=Arabidopsis thaliana GN=PCMP-E12 PE=2 SV=2
Length = 501
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 113/213 (53%), Gaps = 4/213 (1%)
Query: 98 EATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 157
E VLLQ C K+ GKR+H + F+ + + +L+ +Y+L G + +F
Sbjct: 109 ETYAVLLQECKQRKEYTKGKRIHAQMFV-VGFALNEYLKVKLLILYALSGDLQTAGILFR 167
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
SLK R+L WNA++SG+ + L + L I+ ++ + + PD +TF V +AC + +
Sbjct: 168 SLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQN-RIVPDQYTFASVFRACSALDRLE 226
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G H + K + ++ V +AL+ MY KC+ + ++F+ + RN+++W S+I G+
Sbjct: 227 HGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYG 286
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+G E KM EEG P+ +T + VL
Sbjct: 287 YHGKVSEVLKCFEKMK--EEGCRPNPVTFLVVL 317
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 126/253 (49%), Gaps = 12/253 (4%)
Query: 70 ITTLCEESKSLNKALSLLQEN-LHNADLKEAT-GVLLQACGHEKDIEIGKRVHELVSAST 127
+++LC+ + L +AL L+E L + E T +L AC H + + GK +H +
Sbjct: 274 LSSLCQNEQLL-EALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 128 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIF 187
+ + + L+ MY C L RRVFD + R + WNA+++G+++NE + L +F
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 188 VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 247
+ + L ++ T V+ AC +HG K GL D FV N L+ MY +
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSR 452
Query: 248 CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEE---------G 298
++ +++F M +R+LV+WN++I G+ + ++ LL KM E
Sbjct: 453 LGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS 512
Query: 299 FIPDVITVVTVLP 311
P+ IT++T+LP
Sbjct: 513 LKPNSITLMTILP 525
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 112/218 (51%), Gaps = 13/218 (5%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++ AC + +H V + F+ NT L+ MYS G + R+F ++ R
Sbjct: 411 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT-LMDMYSRLGKIDIAMRIFGKMEDR 469
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVEL----------SSDTELKPDNFTFPCVIKACGG 212
+L WN +++G+ +E + D L + ++ +S LKP++ T ++ +C
Sbjct: 470 DLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAA 529
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
++ + G +H A K L DV V +AL+ MY KC ++ K+F+ +P++N+++WN I
Sbjct: 530 LSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVI 589
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I + +G E+ DLL MM +G P+ +T ++V
Sbjct: 590 IMAYGMHGNGQEAIDLLRMMM--VQGVKPNEVTFISVF 625
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 7/212 (3%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL+A +D+E+GK++H V + + L+ +Y CG +VFD + R
Sbjct: 103 LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER 162
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA---DVGFG 219
N WN+L+S E + L F D ++P +FT V+ AC + + G
Sbjct: 163 NQVSWNSLISSLCSFEKWEMALEAF-RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMG 221
Query: 220 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
VH + G + + F+ N L+AMYGK + L R+LV+WN+++ +N
Sbjct: 222 KQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN 280
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ + L +M+ EG PD T+ +VLP
Sbjct: 281 EQLLEALEYLREMV--LEGVEPDEFTISSVLP 310
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
++R+ W L+ ++ L + + +V++ +KPDN+ FP ++KA + D+ G
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIV-LGIKPDNYAFPALLKAVADLQDMELG 116
Query: 220 SGVHGMAAKMGL-IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII---CG 275
+H K G + V V+N L+ +Y KC + K+F+ + ERN VSWNS+I C
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 176
Query: 276 FSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
F + + E+F ++ +E P T+V+V+
Sbjct: 177 FEKWEMALEAFRCML-----DENVEPSSFTLVSVV 206
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 122/232 (52%), Gaps = 6/232 (2%)
Query: 81 NKALSLLQENLHNADLKEATGVL--LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTR 138
+KAL+ ++ L + G+ + AC + ++ G+++H S FS+D
Sbjct: 573 DKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG-FSSDLPFQNA 631
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
L+T+YS CG +S F+ + + WNALVSGF ++ + L +FV ++ + +
Sbjct: 632 LVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG-IDN 690
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
+NFTF +KA A++ G VH + K G + V NALI+MY KC + + K F
Sbjct: 691 NNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQF 750
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ +N VSWN+II +S++GF E+ D +M+ P+ +T+V VL
Sbjct: 751 LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMI--HSNVRPNHVTLVGVL 800
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 111/209 (53%), Gaps = 5/209 (2%)
Query: 103 LLQAC-GHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
+L+AC G ++ +++H + + + N LI +YS GF +RRVFD L+
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNP-LIDLYSRNGFVDLARRVFDGLRL 250
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
++ W A++SG +KNE + + +F ++ + P + F V+ AC I + G
Sbjct: 251 KDHSSWVAMISGLSKNECEAEAIRLFCDMYV-LGIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+HG+ K+G D +V NAL+++Y + +F M +R+ V++N++I G S+ G+
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 369
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L +M +G PD T+ +++
Sbjct: 370 GEKAMELFKRMH--LDGLEPDSNTLASLV 396
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + +EIG+++H LV FS+D + L+++Y G + + +F ++ R
Sbjct: 294 VLSACKKIESLEIGEQLHGLV-LKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR 352
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ +N L++G ++ + +F + D L+PD+ T ++ AC + G +
Sbjct: 353 DAVTYNTLINGLSQCGYGEKAMELFKRMHLDG-LEPDSNTLASLVVACSADGTLFRGQQL 411
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K+G + + AL+ +Y KCA +E + F N+V WN ++ +
Sbjct: 412 HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDL 471
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
SF + + M EE +P+ T ++L
Sbjct: 472 RNSFRIF-RQMQIEE-IVPNQYTYPSIL 497
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 4/192 (2%)
Query: 103 LLQAC-GHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL+ C ++ G+++H + SN ++ +L Y G + +VFD +
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNG-CLSEKLFDFYLFKGDLYGAFKVFDEMPE 148
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC-GGIADVGFGS 220
R +F WN ++ L +V +FV + S+ + P+ TF V++AC GG
Sbjct: 149 RTIFTWNKMIKELASRNLIGEVFGLFVRMVSEN-VTPNEGTFSGVLEACRGGSVAFDVVE 207
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H GL V N LI +Y + FV+ ++F+ + ++ SW ++I G S+N
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 267
Query: 281 FSCESFDLLIKM 292
E+ L M
Sbjct: 268 CEAEAIRLFCDM 279
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 90/191 (47%), Gaps = 2/191 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ AC + + G+++H + F+++ I L+ +Y+ C + F +
Sbjct: 395 LVVACSADGTLFRGQQLHAYTT-KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE 453
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ WN ++ + + + IF ++ + E+ P+ +T+P ++K C + D+ G +
Sbjct: 454 NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE-EIVPNQYTYPSILKTCIRLGDLELGEQI 512
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K + +V + LI MY K ++ + +++VSW ++I G+++ F
Sbjct: 513 HSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFD 572
Query: 283 CESFDLLIKMM 293
++ +M+
Sbjct: 573 DKALTTFRQML 583
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 147 GFP--LDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFP 204
G P L +R VF +L + A+ +++E + + VE + ++P++ T
Sbjct: 32 GVPRKLKTRTVFPTLCGTRRASFAAISVYISEDESFQEKRIDSVE---NRGIRPNHQTLK 88
Query: 205 CVIKAC----GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEV 260
+++ C G + + G +H K+GL + +S L Y + K+F+
Sbjct: 89 WLLEGCLKTNGSLDE---GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDE 145
Query: 261 MPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
MPER + +WN +I + E F L ++M+ E P+ T VL
Sbjct: 146 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVS--ENVTPNEGTFSGVL 193
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 114/208 (54%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
++++C + IGK VH + + F D + L+T YS CG +R+VFD + +
Sbjct: 113 VIKSCADLSALRIGKGVH-CHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEK 171
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+LVSGF +N L + + +F ++ ++ +PD+ TF ++ AC V GS V
Sbjct: 172 SIVAWNSLVSGFEQNGLADEAIQVFYQMR-ESGFEPDSATFVSLLSACAQTGAVSLGSWV 230
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H GL +V + ALI +Y +C V + ++F+ M E N+ +W ++I + +G+
Sbjct: 231 HQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYG 290
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ +L KM + G IP+ +T V VL
Sbjct: 291 QQAVELFNKMED-DCGPIPNNVTFVAVL 317
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 110/216 (50%), Gaps = 8/216 (3%)
Query: 100 TGVLLQACGHEKDIEIGKRVHELVSAS-----TQFSNDFIINTRLITMYSLCGFPLDSRR 154
T V + +E + G RV +L T + + T+LIT+ +
Sbjct: 3 TKVAANSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHL 62
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
+F S+ + F +N+++ +K L ++ + + S + + P N+TF VIK+C ++
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLS-SNVSPSNYTFTSVIKSCADLS 121
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
+ G GVH A G D +V AL+ Y KC +E ++F+ MPE+++V+WNS++
Sbjct: 122 ALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVS 181
Query: 275 GFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
GF +NG + E+ + +M E GF PD T V++L
Sbjct: 182 GFEQNGLADEAIQVFYQMR--ESGFEPDSATFVSLL 215
Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 2/158 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
LL AC + +G VH+ + S + + T LI +YS CG +R VFD +K
Sbjct: 214 LLSACAQTGAVSLGSWVHQYI-ISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKET 272
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W A++S + + + +F ++ D P+N TF V+ AC V G V
Sbjct: 273 NVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSV 332
Query: 223 HG-MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 259
+ M LI V ++ M G+ F++E K
Sbjct: 333 YKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIH 370
>sp|Q3ECB8|PP128_ARATH Pentatricopeptide repeat-containing protein At1g77170
OS=Arabidopsis thaliana GN=PCMP-E21 PE=2 SV=1
Length = 467
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 113/211 (53%), Gaps = 6/211 (2%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
++++A D +GK +H V+ F D + IT+Y G ++R+VFD
Sbjct: 122 IVIKAAVQIHDFTLGKELHS-VAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPE 180
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
R L WNA++ G + + +FV++ + L+PD+FT V +CGG+ D+
Sbjct: 181 RKLGSWNAIIGGLNHAGRANEAVEMFVDMKR-SGLEPDDFTMVSVTASCGGLGDLSLAFQ 239
Query: 222 VHG--MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+H + AK D+ + N+LI MYGKC ++ +FE M +RN+VSW+S+I G++ N
Sbjct: 240 LHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAAN 299
Query: 280 GFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G + E+ + +M E G P+ IT V VL
Sbjct: 300 GNTLEALECFRQMR--EFGVRPNKITFVGVL 328
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 10/181 (5%)
Query: 136 NTRLITMYSLCGFPLDSRRVF-DSLKTRNL------FQWNALVSGFTKNELYTDVLSIFV 188
N L T+ S C RR+ D ++R L F WN ++ + ++E D + +++
Sbjct: 47 NKLLATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYL 106
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 248
+ T L PD ++ P VIKA I D G +H +A ++G +GD F + I +Y K
Sbjct: 107 GMVRSTVL-PDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKA 165
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVT 308
E K+F+ PER L SWN+II G + G + E+ ++ + M G PD T+V+
Sbjct: 166 GEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMK--RSGLEPDDFTMVS 223
Query: 309 V 309
V
Sbjct: 224 V 224
>sp|Q9SN85|PP267_ARATH Pentatricopeptide repeat-containing protein At3g47530
OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1
Length = 591
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 116/209 (55%), Gaps = 5/209 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L+ C D+ G ++H + S F +D ++ T L+ +YS C D+ +VFD + R+
Sbjct: 120 LKCCIKSGDLLGGLQIHGKI-FSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRD 178
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTE--LKPDNFTFPCVIKACGGIADVGFGSG 221
WN L S + +N+ DVL +F ++ +D + +KPD T ++AC + + FG
Sbjct: 179 TVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQ 238
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH + GL G + +SN L++MY +C +++ ++F M ERN+VSW ++I G + NGF
Sbjct: 239 VHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGF 298
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ + +M+ + G P+ T+ +L
Sbjct: 299 GKEAIEAFNEML--KFGISPEEQTLTGLL 325
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 5/198 (2%)
Query: 117 KRVHELVSASTQFSNDFIINTRLITMYSLCGFPLD---SRRVFDSLKTRNLFQWNALVSG 173
+++H L+ ++ N + + ++ +L P D S RVF L N ++
Sbjct: 28 RQIHALLLRTSLIRNSDVFH-HFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRA 86
Query: 174 FTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
F+ ++ + +F L ++ L + + +K C D+ G +HG G +
Sbjct: 87 FSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLS 146
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
D + L+ +Y C + K+F+ +P+R+ VSWN + + N + + L KM
Sbjct: 147 DSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMK 206
Query: 294 GCEEGFI-PDVITVVTVL 310
+G + PD +T + L
Sbjct: 207 NDVDGCVKPDGVTCLLAL 224
>sp|Q9FFN1|PP363_ARATH Pentatricopeptide repeat-containing protein At5g03800
OS=Arabidopsis thaliana GN=EMB175 PE=2 SV=1
Length = 896
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 118/214 (55%), Gaps = 13/214 (6%)
Query: 103 LLQACGHEKDIEIGKRVH----ELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
LL+ D+E+ K VH +L T+ N LI+ Y GFP ++ VF S
Sbjct: 86 LLRLSAQYHDVEVTKAVHASFLKLREEKTRLGN------ALISTYLKLGFPREAILVFVS 139
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGF 218
L + + + AL+SGF++ L + L +F + ++P+ +TF ++ AC ++
Sbjct: 140 LSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSL 199
Query: 219 GSGVHGMAAKMGLIGDVFVSNALIAMYGK--CAFVEEMVKLFEVMPERNLVSWNSIICGF 276
G +HG+ K G + VFVSN+L+++Y K + ++++KLF+ +P+R++ SWN+++
Sbjct: 200 GIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSL 259
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ G S ++FDL +M EGF D T+ T+L
Sbjct: 260 VKEGKSHKAFDLFYEMNRV-EGFGVDSFTLSTLL 292
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 112/237 (47%), Gaps = 11/237 (4%)
Query: 78 KSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHEL-VSASTQFSNDFIIN 136
K+L +LQ + D + V ACG + ++ +++H + T F+ I
Sbjct: 400 KALKLFTDMLQRGVELTDFSLTSAV--DACGLVSEKKVSEQIHGFCIKFGTAFNP--CIQ 455
Query: 137 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNA---LVSGFTKNELYTDVLSIFVELSSD 193
T L+ M + C D+ +FD + NL A ++ G+ +N L +S+F +
Sbjct: 456 TALLDMCTRCERMADAEEMFDQWPS-NLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCE 514
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
+L D + ++ CG + G +H A K G D+ + N+LI+MY KC ++
Sbjct: 515 QKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDD 574
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+K+F M E +++SWNS+I + E+ L +M E+ PD+IT+ V+
Sbjct: 575 AIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMN--EKEIKPDIITLTLVI 629
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 40/227 (17%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMY-----SLCGFPLDSRRVFD 157
+L AC +G ++H L+ S F N ++ L+++Y S C D ++FD
Sbjct: 187 ILTACVRVSRFSLGIQIHGLIVKSG-FLNSVFVSNSLMSLYDKDSGSSCD---DVLKLFD 242
Query: 158 SLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
+ R++ WN +VS K +F E++ D+FT ++ +C + +
Sbjct: 243 EIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLL 302
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGK------------------------------ 247
G +HG A ++GL+ ++ V+NALI Y K
Sbjct: 303 RGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYM 362
Query: 248 -CAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
V+ V++F + E+N +++N+++ GF NG ++ L M+
Sbjct: 363 SFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDML 409
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 20/191 (10%)
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKN-------ELYTD 182
+ D + T +IT Y G + +F ++ +N +NAL++GF +N +L+TD
Sbjct: 348 AQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTD 407
Query: 183 VLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALI 242
+L VEL+ +F+ + ACG +++ +HG K G + + AL+
Sbjct: 408 MLQRGVELT--------DFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALL 459
Query: 243 AMYGKCAFVEEMVKLFEVMPERNLVS---WNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
M +C + + ++F+ P NL S SII G++ NG ++ L + + CE+
Sbjct: 460 DMCTRCERMADAEEMFDQWPS-NLDSSKATTSIIGGYARNGLPDKAVSLFHRTL-CEQKL 517
Query: 300 IPDVITVVTVL 310
D +++ +L
Sbjct: 518 FLDEVSLTLIL 528
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 103/197 (52%), Gaps = 4/197 (2%)
Query: 115 IGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGF 174
+G++ H LV + F D ++T L+ MY G D +VF + RN + W+ +VSG+
Sbjct: 136 VGRQAHALVVKMSSF-GDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGY 194
Query: 175 TKNELYTDVLSIF-VELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG 233
+ + +F + L E ++ F V+ + VG G +H + K GL+G
Sbjct: 195 ATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLG 254
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
V +SNAL+ MY KC + E K+F+ +RN ++W++++ G+S+NG S E+ L +M
Sbjct: 255 FVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMF 314
Query: 294 GCEEGFIPDVITVVTVL 310
G P T+V VL
Sbjct: 315 SA--GIKPSEYTIVGVL 329
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 111/208 (53%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC +E GK++H + F T L+ MY+ G D+R+ FD L+ R
Sbjct: 328 VLNACSDICYLEEGKQLHSFL-LKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQER 386
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +L+SG+ +N + L ++ + + + P++ T V+KAC +A + G V
Sbjct: 387 DVALWTSLISGYVQNSDNEEALILYRRMKT-AGIIPNDPTMASVLKACSSLATLELGKQV 445
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K G +V + +AL MY KC +E+ +F P +++VSWN++I G S NG
Sbjct: 446 HGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQG 505
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ +L +M+ EG PD +T V ++
Sbjct: 506 DEALELFEEMLA--EGMEPDDVTFVNII 531
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 116/223 (52%), Gaps = 21/223 (9%)
Query: 95 DLKEATGVLLQACGH---EKDIEIGKRVHELV---SASTQFSNDFIINTRLITMYSLCGF 148
+L T LL+ H ++++ G+ VH + AST + + L+ Y+ CG
Sbjct: 9 ELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANV----LVNFYAKCGK 64
Query: 149 PLDSRRVFDSLKTRNLFQWNALVSGFTKN----ELYTDVLSIFVELSSDTELKPDNFTFP 204
+ +F+++ +++ WN+L++G+++N YT V+ +F E+ + ++ P+ +T
Sbjct: 65 LAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYT-VMQLFREMRAQ-DILPNAYTLA 122
Query: 205 CVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 264
+ KA + G H + KM GD++V +L+ MY K VE+ +K+F MPER
Sbjct: 123 GIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER 182
Query: 265 NLVSWNSIICGFSENGFSCES---FDLLIKMMGCEEGFIPDVI 304
N +W++++ G++ G E+ F+L ++ EEG D +
Sbjct: 183 NTYTWSTMVSGYATRGRVEEAIKVFNLFLREK--EEGSDSDYV 223
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 103/198 (52%), Gaps = 4/198 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+ +G+++H ++ ++ L+TMYS C ++ ++FDS RN W+A+V+
Sbjct: 237 VGLGRQIH-CITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVT 295
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI 232
G+++N + + +F + S +KP +T V+ AC I + G +H K+G
Sbjct: 296 GYSQNGESLEAVKLFSRMFS-AGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE 354
Query: 233 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKM 292
+F + AL+ MY K + + K F+ + ER++ W S+I G+ +N + E+ L +M
Sbjct: 355 RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 414
Query: 293 MGCEEGFIPDVITVVTVL 310
G IP+ T+ +VL
Sbjct: 415 K--TAGIIPNDPTMASVL 430
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC +E+GK+VH + F + I + L TMYS CG D VF +
Sbjct: 429 VLKACSSLATLELGKQVHGH-TIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNK 487
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
++ WNA++SG + N + L +F E+ ++ ++PD+ TF +I AC
Sbjct: 488 DVVSWNAMISGLSHNGQGDEALELFEEMLAEG-MEPDDVTFVNIISAC 534
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
TEL P T + ++ G VHG + G + +N L+ Y KC + +
Sbjct: 8 TELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAK 67
Query: 254 MVKLFEVMPERNLVSWNSIICGFSENGFSCESFDL--LIKMMGCEEGFIPDVITVVTVL 310
+F + +++VSWNS+I G+S+NG S+ + L + M ++ +P+ T+ +
Sbjct: 68 AHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQD-ILPNAYTLAGIF 125
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 101/191 (52%), Gaps = 2/191 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V+L+ACG +I G+ +H ++ S+ ++ + L+ MY G S RVF +
Sbjct: 113 VVLKACGQSSNIAYGESLHAYAVKTSLLSSVYV-GSSLLDMYKRVGKIDKSCRVFSEMPF 171
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
RN W A+++G Y + L+ F E+S EL D +TF +KAC G+ V +G
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEEL-SDTYTFAIALKACAGLRQVKYGKA 230
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+H G + + V+N+L MY +C +++ + LFE M ER++VSW S+I + G
Sbjct: 231 IHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQ 290
Query: 282 SCESFDLLIKM 292
++ + IKM
Sbjct: 291 EVKAVETFIKM 301
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 95/186 (51%), Gaps = 2/186 (1%)
Query: 101 GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 160
+ L+AC + ++ GK +H V F + L TMY+ CG D +F+++
Sbjct: 213 AIALKACAGLRQVKYGKAIHTHVIVRG-FVTTLCVANSLATMYTECGEMQDGLCLFENMS 271
Query: 161 TRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGS 220
R++ W +L+ + + + F+++ ++++ P+ TF + AC ++ + +G
Sbjct: 272 ERDVVSWTSLIVAYKRIGQEVKAVETFIKMR-NSQVPPNEQTFASMFSACASLSRLVWGE 330
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENG 280
+H +GL + VSN+++ MY C + LF+ M R+++SW++II G+ + G
Sbjct: 331 QLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAG 390
Query: 281 FSCESF 286
F E F
Sbjct: 391 FGEEGF 396
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ AC + G+++H V S ++ ++ ++ MYS CG + + +F ++ R
Sbjct: 316 MFSACASLSRLVWGEQLHCNV-LSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCR 374
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W+ ++ G+ + + F + + KP +F ++ G +A + G V
Sbjct: 375 DIISWSTIIGGYCQAGFGEEGFKYFSWMR-QSGTKPTDFALASLLSVSGNMAVIEGGRQV 433
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H +A GL + V ++LI MY KC ++E +F ++VS ++I G++E+G S
Sbjct: 434 HALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKS 493
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL K + + GF PD +T ++VL
Sbjct: 494 KEAIDLFEKSL--KVGFRPDSVTFISVL 519
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 4/190 (2%)
Query: 122 LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYT 181
+V S Q F N+ L ++ + G +R+VFD + ++ W +++ +
Sbjct: 30 IVRISNQVMVKFDPNSHLRSLIN-AGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSD 88
Query: 182 DVLSIFVELSS-DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNA 240
+ L +F + D + PD V+KACG +++ +G +H A K L+ V+V ++
Sbjct: 89 EALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSS 148
Query: 241 LIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI 300
L+ MY + +++ ++F MP RN V+W +II G G E +M EE +
Sbjct: 149 LLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEE--L 206
Query: 301 PDVITVVTVL 310
D T L
Sbjct: 207 SDTYTFAIAL 216
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 99 ATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 158
A LL G+ IE G++VH L + + + + LI MYS CG ++ +F
Sbjct: 413 ALASLLSVSGNMAVIEGGRQVHAL-ALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGE 471
Query: 159 LKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADV 216
++ A+++G+ ++ + + +F E S +PD+ TF V+ AC G D+
Sbjct: 472 TDRDDIVSLTAMINGYAEHGKSKEAIDLF-EKSLKVGFRPDSVTFISVLTACTHSGQLDL 530
Query: 217 GF 218
GF
Sbjct: 531 GF 532
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 112/208 (53%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+A G +D+ G+ VH L + + D I + L+ MY C D+++VFD + +R
Sbjct: 210 VLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSR 269
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W AL++G+ ++ + + +F E+ +++ P+ T V+ AC + + G V
Sbjct: 270 NVVTWTALIAGYVQSRCFDKGMLVFEEMLK-SDVAPNEKTLSSVLSACAHVGALHRGRRV 328
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H K + + LI +Y KC +EE + +FE + E+N+ +W ++I GF+ +G++
Sbjct: 329 HCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYA 388
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++FDL M+ P+ +T + VL
Sbjct: 389 RDAFDLFYTMLSSHVS--PNEVTFMAVL 414
Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 92/151 (60%), Gaps = 3/151 (1%)
Query: 130 SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVE 189
S+ F+ N+ LI+ YS G + R+FD + +++ W A++ GF +N ++ + FVE
Sbjct: 136 SDPFVRNS-LISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVE 194
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIG-DVFVSNALIAMYGKC 248
+ T + + T V+KA G + DV FG VHG+ + G + DVF+ ++L+ MYGKC
Sbjct: 195 MKK-TGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKC 253
Query: 249 AFVEEMVKLFEVMPERNLVSWNSIICGFSEN 279
+ ++ K+F+ MP RN+V+W ++I G+ ++
Sbjct: 254 SCYDDAQKVFDEMPSRNVVTWTALIAGYVQS 284
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 26/229 (11%)
Query: 85 SLLQENLHNADLKEATGVLLQA--CGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITM 142
+LL LH LK+ +LL + +D+ + + + +A+TQF
Sbjct: 6 TLLDLPLHFLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRY----------- 54
Query: 143 YSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV-ELSSDTELKPDNF 201
+RR+ L+T ++ W++L+ F+ LS + P
Sbjct: 55 ---------ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRH 105
Query: 202 TFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 261
TFP ++KA + D H K GL D FV N+LI+ Y + +LF+
Sbjct: 106 TFPPLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGA 164
Query: 262 PERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++++V+W ++I GF NG + E+ ++M + G + +TVV+VL
Sbjct: 165 EDKDVVTWTAMIDGFVRNGSASEAMVYFVEMK--KTGVAANEMTVVSVL 211
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 92/160 (57%), Gaps = 3/160 (1%)
Query: 151 DSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
D+ ++FD + + F WN ++ GFT LY + + + + +K D FT+P VIK+
Sbjct: 82 DALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVF-AGVKADTFTYPFVIKSV 140
Query: 211 GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 270
GI+ + G +H M K+G + DV+V N+LI++Y K + K+FE MPER++VSWN
Sbjct: 141 AGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWN 200
Query: 271 SIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
S+I G+ G S L +M+ C GF PD + ++ L
Sbjct: 201 SMISGYLALGDGFSSLMLFKEMLKC--GFKPDRFSTMSAL 238
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 108/208 (51%), Gaps = 6/208 (2%)
Query: 104 LQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 163
L AC H ++GK +H S + D ++ T ++ MYS G + R+F+ + RN
Sbjct: 238 LGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRN 297
Query: 164 LFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVH 223
+ WN ++ + +N TD F ++S L+PD T ++ A + G +H
Sbjct: 298 IVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIH 353
Query: 224 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSC 283
G A + G + + + ALI MYG+C ++ +F+ M E+N++SWNSII + +NG +
Sbjct: 354 GYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNY 413
Query: 284 ESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+ +L ++ + +PD T+ ++LP
Sbjct: 414 SALELFQELW--DSSLVPDSTTIASILP 439
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 4/200 (2%)
Query: 113 IEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 172
+E GK++H +V F +D + LI++Y G D+ +VF+ + R++ WN+++S
Sbjct: 146 LEEGKKIHAMV-IKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMIS 204
Query: 173 GFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL- 231
G+ L +F E+ KPD F+ + AC + G +H A + +
Sbjct: 205 GYLALGDGFSSLMLFKEMLK-CGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIE 263
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
GDV V +++ MY K V ++F M +RN+V+WN +I ++ NG ++F L +
Sbjct: 264 TGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAF-LCFQ 322
Query: 292 MMGCEEGFIPDVITVVTVLP 311
M + G PDVIT + +LP
Sbjct: 323 KMSEQNGLQPDVITSINLLP 342
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 2/179 (1%)
Query: 116 GKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 175
G+ +H + F ++ T LI MY CG + +FD + +N+ WN++++ +
Sbjct: 349 GRTIHGY-AMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYV 407
Query: 176 KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDV 235
+N L +F EL D+ L PD+ T ++ A + G +H K +
Sbjct: 408 QNGKNYSALELFQELW-DSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNT 466
Query: 236 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMG 294
+ N+L+ MY C +E+ K F + +++VSWNSII ++ +GF S L +M+
Sbjct: 467 IILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIA 525
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 89/184 (48%), Gaps = 7/184 (3%)
Query: 83 ALSLLQENLHNADLKEATGV--LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLI 140
AL L QE ++ + ++T + +L A + G+ +H + S +SN I+N+ L+
Sbjct: 415 ALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNS-LV 473
Query: 141 TMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDN 200
MY++CG D+R+ F+ + +++ WN+++ + + + +F E+ + + + P+
Sbjct: 474 HMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIA-SRVNPNK 532
Query: 201 FTFPCVIKAC--GGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
TF ++ AC G+ D G+ M + G+ + ++ + G+ +
Sbjct: 533 STFASLLAACSISGMVDEGW-EYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFL 591
Query: 259 EVMP 262
E MP
Sbjct: 592 EEMP 595
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 114 bits (286), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 108/208 (51%), Gaps = 2/208 (0%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+ C + + G +VH + S N I + LI MY C PL + +VFDS+ R
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLN-LITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
N+ W+AL+SG N LS+F E+ + P+ FTF +KACG + + G +
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQG-IYPNEFTFSTNLKACGLLNALEKGLQI 129
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG K+G V V N+L+ MY KC + E K+F + +R+L+SWN++I GF G+
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYG 189
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ D M PD T+ ++L
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLL 217
Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 4/209 (1%)
Query: 103 LLQACGHEKDIEIGKRVHE-LVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL+AC I GK++H LV + + I L+ +Y CG+ +R+ FD +K
Sbjct: 216 LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE 275
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
+ + W++L+ G+ + + + + +F L + + D+F +I A + G
Sbjct: 276 KTMISWSSLILGYAQEGEFVEAMGLFKRLQ-ELNSQIDSFALSSIIGVFADFALLRQGKQ 334
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
+ +A K+ + V N+++ MY KC V+E K F M ++++SW +I G+ ++G
Sbjct: 335 MQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGL 394
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+S + +M+ PD + + VL
Sbjct: 395 GKKSVRIFYEML--RHNIEPDEVCYLAVL 421
>sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840
OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2
Length = 545
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 99/172 (57%), Gaps = 2/172 (1%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+I+ Y+ G +++ VFDS+ R++ WNA+V+ + Y +VL +F ++ D+ KP
Sbjct: 243 MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKP 302
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 258
D FT V+ AC + + G VH K G+ + F++ AL+ MY KC +++ +++F
Sbjct: 303 DGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVF 362
Query: 259 EVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+R++ +WNSII S +G ++ ++ +M+ EGF P+ IT + VL
Sbjct: 363 RATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMV--YEGFKPNGITFIGVL 412
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
Query: 155 VFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
+ + + + N F N+++ + + L++F E+ + PD ++F V+KAC
Sbjct: 96 ILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGP-VFPDKYSFTFVLKACAAFC 154
Query: 215 DVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 274
G +HG+ K GL+ DVFV N L+ +YG+ + E K+ + MP R+ VSWNS++
Sbjct: 155 GFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLS 214
Query: 275 GFSENGFSCESFDLLIKM 292
+ E G E+ L +M
Sbjct: 215 AYLEKGLVDEARALFDEM 232
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 42/208 (20%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC E G+++H L S ++ F+ NT L+ +Y G+ +R+V D + R
Sbjct: 146 VLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENT-LVNVYGRSGYFEIARKVLDRMPVR 204
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN+L+S + + L + ++F E+ E +++ F
Sbjct: 205 DAVSWNSLLSAYLEKGLVDEARALFDEME---ERNVESWNF------------------- 242
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
+I+ Y V+E ++F+ MP R++VSWN+++ ++ G
Sbjct: 243 ------------------MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCY 284
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E ++ KM+ + PD T+V+VL
Sbjct: 285 NEVLEVFNKMLD-DSTEKPDGFTLVSVL 311
Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L AC + G+ VH + F+ T L+ MYS CG + VF + R
Sbjct: 310 VLSACASLGSLSQGEWVHVYIDKHGIEIEGFLA-TALVDMYSKCGKIDKALEVFRATSKR 368
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIA 214
++ WN+++S + + L D L IF E+ + KP+ TF V+ AC +
Sbjct: 369 DVSTWNSIISDLSVHGLGKDALEIFSEMVYEG-FKPNGITFIGVLSACNHVG 419
>sp|Q9C9H9|PP114_ARATH Pentatricopeptide repeat-containing protein At1g71420
OS=Arabidopsis thaliana GN=PCMP-H70 PE=2 SV=1
Length = 745
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 124/238 (52%), Gaps = 11/238 (4%)
Query: 66 FLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHE-LVS 124
F++ + TL S + +A+SL ++A L QAC ++++ G +H ++S
Sbjct: 29 FVEGLRTLVR-SGDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLS 87
Query: 125 ASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVL 184
+S + I+ LI MY+ CG L +R+VFD++ RN+ W AL++G+ + +
Sbjct: 88 HPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGF 147
Query: 185 SIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAM 244
+F + S P+ FT V+ +C G VHG+A K+GL ++V+NA+I+M
Sbjct: 148 CLFSSMLS--HCFPNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISM 201
Query: 245 YGKC---AFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGF 299
YG+C A E +FE + +NLV+WNS+I F ++ + ++M GF
Sbjct: 202 YGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGF 259
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 135 INTRLITMYS-LCGFPLDSRRVFDSL-KTRNLFQWNALVSGFTKNELYTDVLSIFVELSS 192
+ T LI +YS + D ++F + R++ WN +++ F + + +F +L
Sbjct: 304 VATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDP-ERAIHLFGQLRQ 362
Query: 193 DTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 252
+ +L PD +TF V+KAC G+ +H K G + D ++N+LI Y KC ++
Sbjct: 363 E-KLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLD 421
Query: 253 EMVKLFEVMPERNLVSWNSIICGFSENG 280
+++F+ M R++VSWNS++ +S +G
Sbjct: 422 LCMRVFDDMDSRDVVSWNSMLKAYSLHG 449
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLC---GFPLDSRRVFDSL 159
+L +C +E GK+VH L + ++ N +I+MY C ++ VF+++
Sbjct: 167 VLTSCRYEP----GKQVHGLALKLGLHCSIYVANA-VISMYGRCHDGAAAYEAWTVFEAI 221
Query: 160 KTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
K +NL WN++++ F L + +F+ + SD + D T + + +D+
Sbjct: 222 KFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDG-VGFDRATLLNICSSLYKSSDLVPN 280
Query: 220 S------GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE----RNLVSW 269
+H + K GL+ V+ ALI +Y + +E+ +++ E R++V+W
Sbjct: 281 EVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSE--MLEDYTDCYKLFMEMSHCRDIVAW 338
Query: 270 NSIICGFS 277
N II F+
Sbjct: 339 NGIITAFA 346
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 234 DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMM 293
+V ++N LI MY KC + ++F+ MPERN+VSW ++I G+ + G E F L M+
Sbjct: 95 NVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML 154
Query: 294 GCEEGFIPDVITVVTVL 310
P+ T+ +VL
Sbjct: 155 S---HCFPNEFTLSSVL 168
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 129 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFV 188
F D ++N LI Y+ CG RVFD + +R++ WN+++ ++ + +L +F
Sbjct: 400 FLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQ 459
Query: 189 ELSSDTELKPDNFTFPCVIKACGGIADVGFG 219
++ ++ PD+ TF ++ AC V G
Sbjct: 460 KM----DINPDSATFIALLSACSHAGRVEEG 486
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 3/209 (1%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
V+L+AC +++ +GK++H V A ++ + T L+ Y C + R F ++
Sbjct: 290 VVLKACASLEELNLGKQIHACV-AKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIRE 348
Query: 162 RNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG 221
N W+A++SG+ + + + + F L S ++FT+ + +AC +AD G
Sbjct: 349 PNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQ 408
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGF 281
VH A K LIG + +ALI MY KC +++ ++FE M ++V+W + I G + G
Sbjct: 409 VHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGN 468
Query: 282 SCESFDLLIKMMGCEEGFIPDVITVVTVL 310
+ E+ L KM+ C G P+ +T + VL
Sbjct: 469 ASEALRLFEKMVSC--GMKPNSVTFIAVL 495
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 110/205 (53%), Gaps = 4/205 (1%)
Query: 76 ESKSLNKALSLLQENLHNADLKEAT--GVLLQACGHEKDIEIGKRVHELVSASTQFSNDF 133
E L+KA+ L L + D ++ LL++ + + ++ G+++H V + SN
Sbjct: 161 EQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNT- 219
Query: 134 IINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSD 193
I T ++ MY CG+ + ++RVFD + + L+ G+T+ D L +FV+L ++
Sbjct: 220 SIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTE 279
Query: 194 TELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEE 253
++ D+F F V+KAC + ++ G +H AK+GL +V V L+ Y KC+ E
Sbjct: 280 G-VEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFES 338
Query: 254 MVKLFEVMPERNLVSWNSIICGFSE 278
+ F+ + E N VSW++II G+ +
Sbjct: 339 ACRAFQEIREPNDVSWSAIISGYCQ 363
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 4/175 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ QAC D IG +VH + + + + LITMYS CG D+ VF+S+
Sbjct: 393 IFQACSVLADCNIGGQVHADAIKRSLIGSQYG-ESALITMYSKCGCLDDANEVFESMDNP 451
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSG- 221
++ W A +SG ++ L +F ++ S +KP++ TF V+ AC V G
Sbjct: 452 DIVAWTAFISGHAYYGNASEALRLFEKMVS-CGMKPNSVTFIAVLTACSHAGLVEQGKHC 510
Query: 222 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICG 275
+ M K + + + +I +Y + ++E +K + MP E + +SW + G
Sbjct: 511 LDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSG 565
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 107/236 (45%), Gaps = 8/236 (3%)
Query: 78 KSLNKALSLLQENLHNADLKEAT---GVLLQACGHEKDIEIGKRVHELVSASTQFSNDFI 134
+ LN+A LQE + A + ++ L +AC + + G+ +H+ + + + +
Sbjct: 62 RKLNEAFEFLQE-MDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLL 120
Query: 135 INTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDT 194
N ++ MY C D+ ++FD + N ++S + + + + +F + +
Sbjct: 121 QNC-VLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASG 179
Query: 195 ELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 254
+ KP + + ++K+ + FG +H + GL + + ++ MY KC ++
Sbjct: 180 D-KPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGA 238
Query: 255 VKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++F+ M + V+ ++ G+++ G + ++ L + ++ EG D VL
Sbjct: 239 KRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLV--TEGVEWDSFVFSVVL 292
>sp|Q9SR01|PP212_ARATH Pentatricopeptide repeat-containing protein At3g04750,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2
SV=1
Length = 661
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 116/241 (48%), Gaps = 35/241 (14%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQ-FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
LL CGH DI +GK VH + +S++ I++ L+ MY C ++R FD++K
Sbjct: 238 LLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKK 297
Query: 162 RNLFQWNALVSGFT----------------KNELYT----------------DVLSIFVE 189
+++ WN +V GF K +L + V +F E
Sbjct: 298 KDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYE 357
Query: 190 LSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 249
++ ++KPD T +I ++ G VHG+ ++ L GD F+S+ALI MY KC
Sbjct: 358 MTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCG 417
Query: 250 FVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTV 309
+E +F+ E+++ W S+I G + +G ++ L +M EEG P+ +T++ V
Sbjct: 418 IIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQ--EEGVTPNNVTLLAV 475
Query: 310 L 310
L
Sbjct: 476 L 476
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 107/224 (47%), Gaps = 36/224 (16%)
Query: 120 HELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNEL 179
H +VS N ++ N+ L+ Y G + +VF + ++ +N ++ G+ K
Sbjct: 155 HIIVSGCLSLGN-YLWNS-LVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGF 212
Query: 180 YTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLI--GDVFV 237
+ L ++ ++ SD ++PD +T ++ CG ++D+ G GVHG + G + ++ +
Sbjct: 213 SLEALKLYFKMVSDG-IEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLIL 271
Query: 238 SNALIAMYGKC--------AF-----------------------VEEMVKLFEVMPERNL 266
SNAL+ MY KC AF +E +F+ MP+R+L
Sbjct: 272 SNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDL 331
Query: 267 VSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
VSWNS++ G+S+ G + L M E PD +T+V+++
Sbjct: 332 VSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLI 375
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 19/154 (12%)
Query: 163 NLFQWNALVSGFT--KNE---LYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
N+F +N ++S + KNE LY+ ++ + PD TF ++KA +++V
Sbjct: 99 NVFVYNTMISAVSSSKNECFGLYSSMIR--------HRVSPDRQTFLYLMKASSFLSEV- 149
Query: 218 FGSGVHGMAAKMGLIG-DVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGF 276
+H G + ++ N+L+ Y + K+F MP ++ S+N +I G+
Sbjct: 150 --KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGY 207
Query: 277 SENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
++ GFS E+ L KM+ +G PD TV+++L
Sbjct: 208 AKQGFSLEALKLYFKMV--SDGIEPDEYTVLSLL 239
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 7/175 (4%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
L+ + ++ G+ VH LV Q D +++ LI MY CG + VF + +
Sbjct: 374 LISGAANNGELSHGRWVHGLV-IRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEK 432
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC--GGIADVGFGS 220
++ W ++++G + L +F + + + P+N T V+ AC G+ + G
Sbjct: 433 DVALWTSMITGLAFHGNGQQALQLFGRMQEEG-VTPNNVTLLAVLTACSHSGLVEEGLHV 491
Query: 221 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE-VMPERNLVS-WNSII 273
H M K G + +L+ + + VEE + + MP R S W SI+
Sbjct: 492 FNH-MKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSIL 545
>sp|Q9SZK1|PP355_ARATH Pentatricopeptide repeat-containing protein At4g38010
OS=Arabidopsis thaliana GN=PCMP-E45 PE=3 SV=1
Length = 559
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 6/208 (2%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+ +ACG I GK++H +V+ F +D + L+ Y +CG ++ +VF + R
Sbjct: 112 VFKACGKFSGIREGKQIHGIVT-KMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVR 170
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ W +++GFT+ LY + L F S +++P+ T+ CV+ + G + + G G+
Sbjct: 171 DVVSWTGIITGFTRTGLYKEALDTF----SKMDVEPNLATYVCVLVSSGRVGCLSLGKGI 226
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
HG+ K + + NALI MY KC + + +++F + +++ VSWNS+I G S
Sbjct: 227 HGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERS 286
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
E+ DL +M G PD + +VL
Sbjct: 287 KEAIDLF-SLMQTSSGIKPDGHILTSVL 313
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 3/208 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L + G + +GK +H L+ + LI MY C D+ RVF L+ +
Sbjct: 210 VLVSSGRVGCLSLGKGIHGLILKRASLIS-LETGNALIDMYVKCEQLSDAMRVFGELEKK 268
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
+ WN+++SG E + + +F + + + +KPD V+ AC + V G V
Sbjct: 269 DKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWV 328
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
H G+ D + A++ MY KC ++E +++F + +N+ +WN+++ G + +G
Sbjct: 329 HEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHG 388
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVL 310
ES +M+ + GF P+++T + L
Sbjct: 389 LESLRYFEEMV--KLGFKPNLVTFLAAL 414
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 97/213 (45%), Gaps = 13/213 (6%)
Query: 102 VLLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 161
VLL+ + + K++ + +D IIN + + F S + S+++
Sbjct: 8 VLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRS 67
Query: 162 -RNLFQWNALVSGFT---KNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVG 217
+ F +N L+S + K + FV PD FTFP V KACG + +
Sbjct: 68 VLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVS----NGFSPDMFTFPPVFKACGKFSGIR 123
Query: 218 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFS 277
G +HG+ KMG D++V N+L+ YG C K+F MP R++VSW II GF+
Sbjct: 124 EGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFT 183
Query: 278 ENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
G E+ D KM P++ T V VL
Sbjct: 184 RTGLYKEALDTFSKM-----DVEPNLATYVCVL 211
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 4/199 (2%)
Query: 112 DIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 171
D+ GK +H V +D I + L+ MY+ DS RVF L R+ WN+LV
Sbjct: 257 DVIKGKEIHGYV-IRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 315
Query: 172 SGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGL 231
+G+ +N Y + L +F ++ + ++KP F VI AC +A + G +HG + G
Sbjct: 316 AGYVQNGRYNEALRLFRQMVT-AKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 374
Query: 232 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIK 291
++F+++AL+ MY KC ++ K+F+ M + VSW +II G + +G E+ L +
Sbjct: 375 GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEE 434
Query: 292 MMGCEEGFIPDVITVVTVL 310
M +G P+ + V VL
Sbjct: 435 MK--RQGVKPNQVAFVAVL 451
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
Query: 148 FPLDS-RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCV 206
F +DS RRVF+ + +++ +N +++G+ ++ +Y D L + E+ + T+LKPD+FT V
Sbjct: 190 FGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGT-TDLKPDSFTLSSV 248
Query: 207 IKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNL 266
+ DV G +HG + G+ DV++ ++L+ MY K A +E+ ++F + R+
Sbjct: 249 LPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG 308
Query: 267 VSWNSIICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVLP 311
+SWNS++ G+ +NG E+ L +M+ + P + +V+P
Sbjct: 309 ISWNSLVAGYVQNGRYNEALRLFRQMVTAK--VKPGAVAFSSVIP 351
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 106/209 (50%), Gaps = 39/209 (18%)
Query: 139 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKP 198
+I++Y+ ++ +F +LK+ + W +++ FT L++ L+ FVE+ + P
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRC-P 103
Query: 199 DNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGK----------- 247
D+ FP V+K+C + D+ FG VHG ++G+ D++ NAL+ MY K
Sbjct: 104 DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVG 163
Query: 248 ----------------------CAF---VEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
C ++ + ++FEVMP +++VS+N+II G++++G
Sbjct: 164 NVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMY 223
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
++ +++ MG + PD T+ +VLP
Sbjct: 224 EDALR-MVREMGTTD-LKPDSFTLSSVLP 250
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 107/204 (52%), Gaps = 4/204 (1%)
Query: 76 ESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELVSASTQFSNDFII 135
+S+ ++ +L L+ L +E +L Q DI + VH + N +
Sbjct: 20 QSRKVSSSLPKLE--LDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSL- 76
Query: 136 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTE 195
+L+ Y+ +R+VFD + RN+ N ++ + N Y + + +F +
Sbjct: 77 GVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCG-CN 135
Query: 196 LKPDNFTFPCVIKACGGIADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 255
++PD++TFPCV+KAC + G +HG A K+GL +FV N L++MYGKC F+ E
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 195
Query: 256 KLFEVMPERNLVSWNSIICGFSEN 279
+ + M R++VSWNS++ G+++N
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQN 219
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 85/158 (53%), Gaps = 3/158 (1%)
Query: 153 RRVFDSLKTRNLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGG 212
+ +F + ++L WN ++ + KN + + + ++ + +D +PD + V+ ACG
Sbjct: 263 KDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADG-FEPDAVSITSVLPACGD 321
Query: 213 IADVGFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 272
+ + G +HG + LI ++ + NALI MY KC +E+ +FE M R++VSW ++
Sbjct: 322 TSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAM 381
Query: 273 ICGFSENGFSCESFDLLIKMMGCEEGFIPDVITVVTVL 310
I + +G C++ L K+ + G +PD I VT L
Sbjct: 382 ISAYGFSGRGCDAVALFSKLQ--DSGLVPDSIAFVTTL 417
Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 37/209 (17%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L+AC I IG+++H + S+ + L++MY CGF ++R V D + R
Sbjct: 146 VLKACSCSGTIVIGRKIHG-SATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR 204
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKACGGIADVGFGSGV 222
++ WN+LV G+ +N+ + D L + C + V
Sbjct: 205 DVVSWNSLVVGYAQNQRFDDALEV-----------------------CREMESVKISHDA 241
Query: 223 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFS 282
MA+ + + + N + +V++M F M +++LVSWN +I + +N
Sbjct: 242 GTMASLLPAVSNTTTENVM--------YVKDM---FFKMGKKSLVSWNVMIGVYMKNAMP 290
Query: 283 CESFDLLIKMMGCEEGFIPDVITVVTVLP 311
E+ +L +M +GF PD +++ +VLP
Sbjct: 291 VEAVELYSRMEA--DGFEPDAVSITSVLP 317
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 103 LLQACGHEKDIEIGKRVHELVSASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 162
+L ACG + +GK++H + N ++ LI MY+ CG +R VF+++K+R
Sbjct: 315 VLPACGDTSALSLGKKIHGYIERKKLIPN-LLLENALIDMYAKCGCLEKARDVFENMKSR 373
Query: 163 NLFQWNALVSGFTKNELYTDVLSIFVELSSDTELKPDNFTFPCVIKAC 210
++ W A++S + + D +++F +L D+ L PD+ F + AC
Sbjct: 374 DVVSWTAMISAYGFSGRGCDAVALFSKL-QDSGLVPDSIAFVTTLAAC 420
Score = 36.2 bits (82), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 241 LIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGFSENGFSCESFDLLIKMMGCEEGFI 300
L+ Y V K+F+ +PERN++ N +I + NGF E + M GC
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGC--NVR 137
Query: 301 PDVITVVTVL 310
PD T VL
Sbjct: 138 PDHYTFPCVL 147
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,169,674
Number of Sequences: 539616
Number of extensions: 4024556
Number of successful extensions: 13205
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 149
Number of HSP's that attempted gapping in prelim test: 10902
Number of HSP's gapped (non-prelim): 1294
length of query: 311
length of database: 191,569,459
effective HSP length: 117
effective length of query: 194
effective length of database: 128,434,387
effective search space: 24916271078
effective search space used: 24916271078
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)