Query 037190
Match_columns 526
No_of_seqs 190 out of 1880
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 09:36:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037190.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037190hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1292 Xanthine/uracil transp 100.0 1.7E-95 4E-100 751.8 35.4 498 20-525 1-507 (510)
2 COG2233 UraA Xanthine/uracil p 100.0 4.8E-79 1E-83 638.8 37.7 411 20-486 5-438 (451)
3 PRK11412 putative uracil/xanth 100.0 7.2E-75 1.6E-79 614.9 42.9 402 31-484 8-430 (433)
4 PRK10720 uracil transporter; P 100.0 1.6E-67 3.4E-72 561.8 41.3 389 19-483 2-407 (428)
5 TIGR03616 RutG pyrimidine util 100.0 3.8E-67 8.2E-72 558.6 43.6 402 18-484 17-428 (429)
6 TIGR00801 ncs2 uracil-xanthine 100.0 3.3E-65 7.1E-70 543.2 40.2 392 27-480 1-415 (415)
7 TIGR03173 pbuX xanthine permea 100.0 1.1E-64 2.4E-69 538.5 39.9 388 37-482 1-406 (406)
8 PF00860 Xan_ur_permease: Perm 100.0 3.1E-60 6.7E-65 501.7 25.4 371 31-435 1-386 (389)
9 COG2252 Xanthine/uracil/vitami 99.9 1.7E-25 3.7E-30 233.8 31.7 383 17-482 5-412 (436)
10 TIGR00843 benE benzoate transp 99.9 7.6E-25 1.6E-29 228.3 33.6 319 32-408 22-353 (395)
11 COG0659 SUL1 Sulfate permease 99.9 3.7E-23 8.1E-28 226.5 34.2 318 30-408 21-371 (554)
12 PF03594 BenE: Benzoate membra 99.9 1E-21 2.2E-26 201.7 31.9 316 32-408 6-337 (378)
13 COG3135 BenE Uncharacterized p 99.9 3.3E-20 7.1E-25 186.5 30.7 317 32-409 21-353 (402)
14 TIGR00815 sulP high affinity s 99.9 1.3E-19 2.9E-24 200.5 33.6 335 30-410 14-384 (563)
15 PRK11660 putative transporter; 99.9 7.3E-19 1.6E-23 194.8 32.8 326 29-402 28-396 (568)
16 PF00916 Sulfate_transp: Sulfa 99.6 1.2E-15 2.6E-20 154.4 10.8 240 145-412 1-274 (280)
17 KOG0236 Sulfate/bicarbonate/ox 99.6 4.8E-13 1E-17 150.1 26.7 325 47-411 91-454 (665)
18 TIGR00834 ae anion exchange pr 98.6 9E-05 2E-09 85.3 32.6 315 70-408 403-796 (900)
19 KOG1172 Na+-independent Cl/HCO 98.4 0.00027 5.9E-09 79.8 30.5 329 39-395 364-760 (876)
20 PF11840 DUF3360: Protein of u 97.8 0.0042 9.2E-08 64.2 22.0 344 22-414 57-419 (492)
21 PF00955 HCO3_cotransp: HCO3- 97.2 0.0003 6.5E-09 76.9 4.1 182 211-408 277-477 (510)
22 COG0659 SUL1 Sulfate permease 88.4 5 0.00011 45.0 12.2 122 280-413 23-155 (554)
23 TIGR00843 benE benzoate transp 86.4 20 0.00043 38.4 14.8 140 56-231 247-393 (395)
24 TIGR00815 sulP high affinity s 84.8 8 0.00017 43.4 11.5 118 281-409 17-150 (563)
25 PRK11660 putative transporter; 77.6 16 0.00035 41.0 10.7 118 280-408 31-155 (568)
26 PF03594 BenE: Benzoate membra 76.7 8.6 0.00019 40.7 7.6 115 276-394 2-127 (378)
27 TIGR00801 ncs2 uracil-xanthine 56.5 2.4E+02 0.0052 30.4 13.9 77 70-168 271-347 (415)
28 COG1457 CodB Purine-cytosine p 49.9 3.8E+02 0.0083 29.3 27.9 64 293-359 242-307 (442)
29 PRK11412 putative uracil/xanth 47.8 82 0.0018 34.3 8.6 77 69-167 276-352 (433)
30 PF13792 Sulfate_tra_GLY: Sulf 47.2 51 0.0011 27.3 5.4 61 29-100 15-75 (84)
31 PF05977 MFS_3: Transmembrane 47.0 4.5E+02 0.0097 29.3 18.0 127 26-166 216-344 (524)
32 TIGR03173 pbuX xanthine permea 46.7 3.9E+02 0.0084 28.5 15.4 76 69-166 254-329 (406)
33 PF00860 Xan_ur_permease: Perm 44.2 3.3E+02 0.0072 28.9 12.6 124 34-181 234-358 (389)
34 PF10762 DUF2583: Protein of u 42.5 39 0.00086 28.0 3.9 29 466-499 49-77 (89)
35 COG3817 Predicted membrane pro 42.4 1.3E+02 0.0027 30.4 8.1 142 138-308 35-195 (313)
36 PRK15034 nitrate/nitrite trans 41.1 5.2E+02 0.011 28.4 16.4 154 1-166 1-164 (462)
37 PF13142 DUF3960: Domain of un 37.1 19 0.00042 29.3 1.3 42 476-517 24-72 (87)
38 TIGR00883 2A0106 metabolite-pr 35.4 3.5E+02 0.0076 27.2 10.8 36 50-85 241-276 (394)
39 PRK10692 hypothetical protein; 30.7 1.1E+02 0.0025 25.5 4.8 29 466-499 49-77 (92)
40 TIGR01299 synapt_SV2 synaptic 28.8 9.1E+02 0.02 28.3 13.7 39 58-96 196-238 (742)
41 PRK10489 enterobactin exporter 28.0 7E+02 0.015 25.9 13.0 59 28-87 224-282 (417)
42 PRK11375 allantoin permease; P 26.5 8.9E+02 0.019 26.6 24.8 26 465-490 456-481 (484)
43 PTZ00207 hypothetical protein; 23.9 1.1E+03 0.024 26.8 15.2 79 17-97 14-98 (591)
44 COG4129 Predicted membrane pro 23.3 8.8E+02 0.019 25.4 13.3 76 72-168 15-90 (332)
45 TIGR00900 2A0121 H+ Antiporter 21.7 7.9E+02 0.017 24.3 11.4 38 49-86 232-269 (365)
46 KOG4085 Uncharacterized conser 21.0 2E+02 0.0043 26.4 5.0 44 354-401 29-72 (175)
No 1
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.7e-95 Score=751.83 Aligned_cols=498 Identities=56% Similarity=1.013 Sum_probs=473.5
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHhhhcCCChHHH-HHHHHHHHHHHHHHHHHHHHhcCCcceEEecc
Q 037190 20 VDFCVSSSPPWSEAMILGFQHYLVMLGTTVIIPTTLVPLMGGGNVEK-AQVINTSLFVAGINTLLQTSFGTRLPVVMGGS 98 (526)
Q Consensus 20 ~~y~~~~~pp~~~~~~~GlQh~l~m~~~~i~~Plii~~a~gl~~~~~-~~li~~~l~~sGi~Tllq~~~G~rlPiv~G~S 98 (526)
+.|++||.|||...+++|+||++.|+++++++|.+++.++|.+++|. +++||++++++||.|++|++||.|||+++|+|
T Consensus 1 l~y~i~d~P~w~~~i~lgfQhyl~~lg~~v~iP~~lv~~m~~g~~~~~~~lIsT~~f~sGI~TllQt~fG~RLp~v~G~S 80 (510)
T KOG1292|consen 1 LHYCINDNPPWPEIILLGFQHYLVCLGTTVLIPFLLVPLMCGGDEEKAVQLISTIFFVSGITTLLQTTFGTRLPLVQGPS 80 (510)
T ss_pred CccCCCCCCCchHHHHhccchHHHHhhhhhhhhhhhcccccCChHHHHHHHHHHHhhhccHHHHHHHHhhcccccccccc
Confidence 46999999999999999999999999999999999999999999988 99999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhccCcccCCCcch----hhhhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhCchhHHHHHHHHHHHh
Q 037190 99 YAFNITSISIAASNRFNIYTDPEQ----RFKESMKTMQGALIMASLFNMLIGFFGFGTIFGRFLNPLAAVPLVTLTGLGL 174 (526)
Q Consensus 99 f~~l~~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~ga~lvaGli~~llg~~g~~~~l~~~~pp~V~G~vi~lIGl~l 174 (526)
|+|++|..++.....+.+..++++ .|.+.+++++||+++++++++++|++|+.+++.|++.|+.+.+++.++|+++
T Consensus 81 fafl~p~~~i~~~~~~~~~~~~~~~~~~~~~~~mr~iqGAlivas~vqiilG~sGl~g~l~rfi~Plti~P~v~lvgl~l 160 (510)
T KOG1292|consen 81 FAFLPPALAIISLPRFTCITTPHETDTERFQHRMREIQGALIVASLVQIILGFSGLWGNLLRFIGPLTIVPLVALVGLGL 160 (510)
T ss_pred eehhhHHHHHHhccccCCCCCcccchhHHHHHHHHHhcchHHHHHHHHHHHhhhhhHHHHHhhcCChhhhhHHHHHhhhh
Confidence 999999999988666656444444 8999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccccchhhhhHHHHHHHHHHHHHh--hhhhhh--hhhhhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcc
Q 037190 175 YAHGFPQLAKCIEVGLPALIILVLLSQY--LPHVMK--SKRAIFDRFAILFTVAIVWGYAEILTLTGLYDNRPPSTQTSC 250 (526)
Q Consensus 175 ~~~g~~~~~~~~~v~~~~l~~~i~l~~~--~~~~~~--~~~~~~r~~avLigivvG~~~a~~lg~~g~~~~~~~~~~~~~ 250 (526)
+..+.+.+++||.++++.+++++++++| +++..+ .+++.++++++++++.+.|++|++++..|.+|.++..++.+|
T Consensus 161 ~~~~~~~~~~~weI~l~~~llli~fsqy~~~~~~~~~~~~~~if~~f~vll~i~ivW~~~~iLT~tgay~~~~~~t~~~~ 240 (510)
T KOG1292|consen 161 FQDGFPKLGKHWEISLPEILLLILFSQYASLPKKGFGSRRIQIFSRFPVLLAIAIVWLYCFILTITGAYPYKPTTTQSSC 240 (510)
T ss_pred HHhhhhhhhhheeecHHHHHHHHHHHHhhhcccccccccccchHhhccHHHHHHHHHHHHHHHHhccccCCCccccCCcc
Confidence 9999999999999999999999999999 543222 346688999999999999999999999999998877789999
Q ss_pred ccCCCCcCCCCCcccccccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcCCCcceehhhhhhhH
Q 037190 251 RTDRSGLITAAPWIMVPFPLQWGPPLFNAGDAFAMMAASFVAIIESTGTFIAASRYGSATPMPPCVLSRGIGWQGLGLLL 330 (526)
Q Consensus 251 ~~d~~~~i~~a~~~~~P~~~~fg~P~f~~~~il~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~i~r~l~~dGl~~il 330 (526)
|+|.+..++++||+.+|+|+|||.|+||.+....++...++.++|++|++.+++|.+.++.++++.+|||+..||+++++
T Consensus 241 RTD~~~vi~~apWi~vPyP~QwG~P~f~~~~~f~m~aa~~va~iES~G~y~a~ar~~~a~ppP~~~inRgi~~eGig~lL 320 (510)
T KOG1292|consen 241 RTDRNGVISSAPWIRVPYPFQWGPPTFSAGLVFAMMAASLVAMIESTGDYIACARLSSATPPPPSVLNRGIGWEGIGSLL 320 (510)
T ss_pred cccHhhhhccCCceeecCCCccCCCcccHHHHHHHHHHHHHHHHHhcchHHHHHHHhcCCCCChhhhhhhhhhhhHHHHH
Confidence 99998888999999999999999999999999999999999999999999999999999888899999999999999999
Q ss_pred hhhcCCCCCCccccchhhhhhhccCCCchHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHHhhchhccc
Q 037190 331 DGAFGTGSGCAASVENAGLLGLTRNGSRRVVQISAGFMLFFSVLGKFGAILASIPLPIVAALYCVLFAYVASAGLGLLQF 410 (526)
Q Consensus 331 aglfG~~p~~t~s~~n~g~i~~Tgv~SR~~~~~~g~~lillgl~pk~~~li~~IP~~Vlggvli~~f~~i~~~Gi~~l~~ 410 (526)
+|+||+..++|+|+||+|+++.||++|||++.++|++|+++|++.||++++++||.|++||+++++|+++...|+++++.
T Consensus 321 ~gl~G~gtG~Tt~~ENigll~vTKVgSRrvvQ~aa~fmI~~~i~gKFgA~fAsIP~piv~~l~c~~~~mv~avgLSnLQf 400 (510)
T KOG1292|consen 321 AGLFGTGTGSTTSVENIGLLGVTKVGSRRVVQIAAGFMIFFGIFGKFGAFFASIPDPIVGGLLCILFGMVGAVGLSNLQF 400 (510)
T ss_pred HHhhCCCccceeeccceeeEeeeeeeeeeehhhhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhhhhhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccEEeehHHHHhhhhhhHHhhhhhhhcCCCCccccccchhhHHHHHhccchhHHHHHHHHHhhhcCCCCCCccc
Q 037190 411 CNLNSFRSKFILGFSLFTGLSVSRYFNEYLYISGHDPVHTASTSFNNMMQVIFSSPATVAIIVAYFLDCTHSLGHSATRQ 490 (526)
Q Consensus 411 ~~~~~~rn~~ivg~sl~~Gl~~p~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~sgi~~g~i~ai~Ln~~~~~~~~~~~~ 490 (526)
+|+++.||.+|+|+|+++|+.+|.+|+++ .+|++++.+|++++++.++++.+.+|+++|++||+++|. .+||
T Consensus 401 ~dlns~RNl~IlG~Sif~gLsip~yF~~~-----~~~v~Tg~~~~d~ilnvll~~~m~Vggi~A~~LDnt~~g---atr~ 472 (510)
T KOG1292|consen 401 VDLNSSRNLFILGFSIFLGLSIPQYFEQY-----PGPVHTGNGWFDDILNVLLSSRMLVGGILAFILDNTLPG---ATRE 472 (510)
T ss_pred eccccccchhhhhHHHHHhccHHHHHHhC-----CCccccCcHHHHHHHHHHhhHHHHHHHHHhhhccccCCC---CChH
Confidence 99999999999999999999999999994 568999999999999999999999999999999999993 2899
Q ss_pred cccccccccccccCCCCCCCccccCCcccccCCCC
Q 037190 491 DCGRHWWGKFLYFNRDARTSDFYSLPCNLSRFFPS 525 (526)
Q Consensus 491 ~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 525 (526)
|||++||+++++.+.|.|++++|+||+++||+||+
T Consensus 473 ~RG~~~w~~~~~~~~d~~~~e~Y~lP~~~n~~f~~ 507 (510)
T KOG1292|consen 473 QRGLRWWDKFETFNGDVRNEEFYSLPFNLNRFFPR 507 (510)
T ss_pred hcCCcchhccccccCCccccccccCcHHHHhhccc
Confidence 99999999999999999999999999999999997
No 2
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=100.00 E-value=4.8e-79 Score=638.80 Aligned_cols=411 Identities=27% Similarity=0.461 Sum_probs=381.8
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHH----hcCCcceEE
Q 037190 20 VDFCVSSSPPWSEAMILGFQHYLVMLGTTVIIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQTS----FGTRLPVVM 95 (526)
Q Consensus 20 ~~y~~~~~pp~~~~~~~GlQh~l~m~~~~i~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~----~G~rlPiv~ 95 (526)
.....|||+|+.|++++|+||+++|+++++++|++++.+.++++||+++++|+++++||++|++|++ +|.|+|+++
T Consensus 5 ~~~~~~~~~~~~~~~~lglQH~lamfg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~l 84 (451)
T COG2233 5 IYVLVDERLPLGKLLLLGLQHLLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYL 84 (451)
T ss_pred ccCcccccCChHHHHHHHHHHHHHHHhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeE
Confidence 3445788889999999999999999999999999999999999999999999999999999999997 566999999
Q ss_pred ecchhHHHHHHHHHhccCcccCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhHH-HHHHhhCchhHHHHHHHHHHHh
Q 037190 96 GGSYAFNITSISIAASNRFNIYTDPEQRFKESMKTMQGALIMASLFNMLIGFFGFGT-IFGRFLNPLAAVPLVTLTGLGL 174 (526)
Q Consensus 96 G~Sf~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~g~~~-~l~~~~pp~V~G~vi~lIGl~l 174 (526)
|+||++++|++++..+++ ++++.++|+++.+|+++++++.. ++ |++|+|||+|+|.++++||++|
T Consensus 85 G~sFafi~p~i~~~~~~g------------~~~~~~~G~ii~ag~~~~li~~~--~~~~l~rlfPPvVtG~Vi~~IGlsL 150 (451)
T COG2233 85 GSSFAFVAPMIAIGGTTG------------DGIAALLGGIIAAGLVYFLISPI--VKIRLARLFPPVVTGPVVLVIGLSL 150 (451)
T ss_pred echHHHHHHHHHHHhccC------------CchHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCCCceEEeEeeeehhhh
Confidence 999999999998877643 25899999999999999999875 57 9999999999999999999999
Q ss_pred hhhhccccc--------------hhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhcCCCC
Q 037190 175 YAHGFPQLA--------------KCIEVGLPALIILVLLSQYLPHVMKSKRAIFDRFAILFTVAIVWGYAEILTLTGLYD 240 (526)
Q Consensus 175 ~~~g~~~~~--------------~~~~v~~~~l~~~i~l~~~~~~~~~~~~~~~r~~avLigivvG~~~a~~lg~~g~~~ 240 (526)
++.++++++ +++.+++.++++++++++|.| +++|++++|+|+++||++++.+|.
T Consensus 151 ~~vai~~~~G~~~~~~~~~~~~~~~l~la~~tl~~il~~~~f~~-------g~~~~i~ILiGlv~G~~la~~~G~----- 218 (451)
T COG2233 151 APVAINMAGGGPGAAGNPDFGSLENLGLALVTLLIILLINRFGK-------GFLRRIPILIGLVVGYLLALFMGM----- 218 (451)
T ss_pred HHHHHHHhhCCCCCCCCcccCchhHHHHHHHHHHHHHHHHHHhh-------hHHHHHHHHHHHHHHHHHHHHhCC-----
Confidence 999887653 246788899999999998865 679999999999999999999973
Q ss_pred CCCCCCCCccccCCCCcCCCCCcccccccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcCCCcc
Q 037190 241 NRPPSTQTSCRTDRSGLITAAPWIMVPFPLQWGPPLFNAGDAFAMMAASFVAIIESTGTFIAASRYGSATPMPPCVLSRG 320 (526)
Q Consensus 241 ~~~~~~~~~~~~d~~~~i~~a~~~~~P~~~~fg~P~f~~~~il~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~i~r~ 320 (526)
+|+++ +.++|||++|.+++|+. +|||.+++++++++++.++|++||++|++++++++.+++++++|+
T Consensus 219 -----------vdf~~-v~~a~w~~~P~~~~fg~-~F~~~ail~m~~v~iV~~~E~~G~i~A~~~itg~~~~~~~~l~rg 285 (451)
T COG2233 219 -----------VDFSG-VAEAPWFALPTPFYFGM-AFDWGAILTMLPVAIVTIVEHTGDITATGEITGRDLDGKPRLRRG 285 (451)
T ss_pred -----------cCccc-cccCceeeCCcccCCCe-eecHHHHHHHHHHHHHHHHHHhhhhhhHHhHhCCcCccCcccccc
Confidence 57776 88999999999999998 999999999999999999999999999999999887777999999
Q ss_pred eehhhhhhhHhhhcCCCCCCccccchhhhhhhccCCCchHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHH
Q 037190 321 IGWQGLGLLLDGAFGTGSGCAASVENAGLLGLTRNGSRRVVQISAGFMLFFSVLGKFGAILASIPLPIVAALYCVLFAYV 400 (526)
Q Consensus 321 l~~dGl~~ilaglfG~~p~~t~s~~n~g~i~~Tgv~SR~~~~~~g~~lillgl~pk~~~li~~IP~~Vlggvli~~f~~i 400 (526)
+++||++++++|+||+.|.||++ ||+|+++.||++||+++.+++++++++|++||+++++++||.||+||+.+++|+++
T Consensus 286 ~~aDGlat~iag~fg~~p~Ttfa-qNiGvv~lT~v~Sr~V~~~aavili~lgl~pk~~al~~sIP~pVlGGa~ivmFG~I 364 (451)
T COG2233 286 LLADGLATLIAGLFGGFPNTTFA-QNIGVVALTGVYSRYVIAGAAVILILLGLFPKFGALIQSIPSPVLGGAMLVLFGMI 364 (451)
T ss_pred eeeccHHHHHHHhcCCCCCCchh-hceeeeeeccCChhHHHHHHHHHHHHHHhhHHHHHHHHhCChhhhhHHHHHHHHHH
Confidence 99999999999999999998876 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhchhcccccCCCCc-cEEeehHHHHhhhhh---hHHhhhhhhhcCCCCccccccchhhHHHHHhccchhHHHHHHHH
Q 037190 401 ASAGLGLLQFCNLNSFR-SKFILGFSLFTGLSV---SRYFNEYLYISGHDPVHTASTSFNNMMQVIFSSPATVAIIVAYF 476 (526)
Q Consensus 401 ~~~Gi~~l~~~~~~~~r-n~~ivg~sl~~Gl~~---p~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~sgi~~g~i~ai~ 476 (526)
..+|+|++.+.|+|++| |.+|+++++.+|++. |+++++ +|++++.+++||+++|+++|++
T Consensus 365 a~sGir~l~~~~~~~~~~Nl~IvAvsl~~Gig~~~~p~~~~~----------------~p~~~~~l~~sGia~g~i~AIv 428 (451)
T COG2233 365 AASGIRILIRNKVDRSRRNLLIVAVSLGLGIGVGAVPEVFLQ----------------LPAWLRPLLSSGIALGTLTAIV 428 (451)
T ss_pred HHHHHHHHHhcccccCccceeeehHHHHhCcchhcCchhhhh----------------CcHHHHHHHhccHHHHHHHHHH
Confidence 99999999999999756 999999999999994 999887 7999999999999999999999
Q ss_pred HhhhcCCCCC
Q 037190 477 LDCTHSLGHS 486 (526)
Q Consensus 477 Ln~~~~~~~~ 486 (526)
||+++|++++
T Consensus 429 LNlll~~~~~ 438 (451)
T COG2233 429 LNLLLPGEKR 438 (451)
T ss_pred HHHhcccccc
Confidence 9999996433
No 3
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=100.00 E-value=7.2e-75 Score=614.90 Aligned_cols=402 Identities=17% Similarity=0.291 Sum_probs=355.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCcceEEecchhHHHHHHHHHh
Q 037190 31 SEAMILGFQHYLVMLGTTVIIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQTSFGTRLPVVMGGSYAFNITSISIAA 110 (526)
Q Consensus 31 ~~~~~~GlQh~l~m~~~~i~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~~G~rlPiv~G~Sf~~l~~~~~i~~ 110 (526)
.+++++|+||+++|+++++++|+++++++|+|++|+++++|++++++||+|++|+.+|+|||++||+||+++++++++..
T Consensus 8 ~~~~~lglQhvl~m~~~~i~vPliva~a~gl~~~~~~~li~~~l~~sGIaTllQ~~~G~rlPiv~G~Sf~~~~~~~~i~~ 87 (433)
T PRK11412 8 RESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITL 87 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeeCCchHHHHHHHHHHh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999998863
Q ss_pred ccCcccCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhCchhHHHHHHHHHHHhhhhhccccc-------
Q 037190 111 SNRFNIYTDPEQRFKESMKTMQGALIMASLFNMLIGFFGFGTIFGRFLNPLAAVPLVTLTGLGLYAHGFPQLA------- 183 (526)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~g~~~~l~~~~pp~V~G~vi~lIGl~l~~~g~~~~~------- 183 (526)
..... +.| ....++..+|+.+++|++++++|++++++|++|+|||+|+|+++++||++|++.+++++.
T Consensus 88 ~~~~~--g~~---~~~~~g~l~g~~i~~g~~~~~lg~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~~a~~~~~G~~~~~~ 162 (433)
T PRK11412 88 GEASR--GTP---INDIATSLAVGIALSGVVTILIGFSGLGHRLARLFTPMVMVVFMLLLGAQLTTIFFKGMLGLPFGIA 162 (433)
T ss_pred ccccc--Ccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhHHHHHHhhHHHHHHHhcCCCccCc
Confidence 21000 000 112345556679999999999999999999999999999999999999999999887541
Q ss_pred --------hhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHH-HHHhcCCCCCCCCCCCCccccCC
Q 037190 184 --------KCIEVGLPALIILVLLSQYLPHVMKSKRAIFDRFAILFTVAIVWGYAE-ILTLTGLYDNRPPSTQTSCRTDR 254 (526)
Q Consensus 184 --------~~~~v~~~~l~~~i~l~~~~~~~~~~~~~~~r~~avLigivvG~~~a~-~lg~~g~~~~~~~~~~~~~~~d~ 254 (526)
.++.+++.++++++.++++. |+++|++++|+|+++||+++. .++ . |+
T Consensus 163 ~~~~~~~~~~~~~a~~~l~~il~~~~~~-------~g~~~~~svLiGiv~G~v~a~~~~g----------------~-d~ 218 (433)
T PRK11412 163 DPNGKIQLPPFGLSVAVMCLVLAMIIFL-------PQRIARYSLLVGTIVGWILWAFCFP----------------S-SH 218 (433)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHHHHHHHHHHHHHhC----------------C-Cc
Confidence 12346666666666666664 567999999999999999865 442 1 44
Q ss_pred CCcCCCCCcccccccccccCcc-ccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcCCCcceehhhhhhhHhhh
Q 037190 255 SGLITAAPWIMVPFPLQWGPPL-FNAGDAFAMMAASFVAIIESTGTFIAASRYGSATPMPPCVLSRGIGWQGLGLLLDGA 333 (526)
Q Consensus 255 ~~~i~~a~~~~~P~~~~fg~P~-f~~~~il~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~i~r~l~~dGl~~ilagl 333 (526)
+. +.+++|.. ++||.|. ||+.+++++++++++.+.|++||++++++.++++.+++++++|++.+||++|+++|+
T Consensus 219 ~~-v~~a~w~~----~pfG~P~~F~~~~il~~~~~~lv~~~e~iG~~~a~~~~~~~~~~~~~~l~rgi~~dGi~s~lagl 293 (433)
T PRK11412 219 SL-SGELHWQW----FPLGSGGALEPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVP 293 (433)
T ss_pred ch-hccCCcee----ecCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccccchhhccHHHHHHHh
Confidence 43 56788853 4589995 999999999999999999999999999999887655578999999999999999999
Q ss_pred cCCCCCCccccchhhhhhhccCCCchHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHHhhchhcccccC
Q 037190 334 FGTGSGCAASVENAGLLGLTRNGSRRVVQISAGFMLFFSVLGKFGAILASIPLPIVAALYCVLFAYVASAGLGLLQFCNL 413 (526)
Q Consensus 334 fG~~p~~t~s~~n~g~i~~Tgv~SR~~~~~~g~~lillgl~pk~~~li~~IP~~Vlggvli~~f~~i~~~Gi~~l~~~~~ 413 (526)
||+.|+++++ ||+|++++||++||+++.++|++++++||+||+++++++||.||+||+++++|+++..+|+|+++++|+
T Consensus 294 fg~~p~tt~s-qNvGvi~~TgV~SR~v~~~aa~ilillgl~PK~~alia~IP~pVlGg~~~~~Fg~I~~~Gi~~l~~~~~ 372 (433)
T PRK11412 294 LAVIPFSPFV-SSIGLLTQTGDYRRRSFIYGSVMCLLVALIPALTRLFCSIPLPVSSAVMLVSYLPLLGSALVFSQQITF 372 (433)
T ss_pred cCCCCCCchh-hhhhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999997766 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccEEeehHHHHhhhhh---h-HHhhhhhhhcCCCCccccccchhhHHHHHhccchhHHHHHHHHHhhhcCCC
Q 037190 414 NSFRSKFILGFSLFTGLSV---S-RYFNEYLYISGHDPVHTASTSFNNMMQVIFSSPATVAIIVAYFLDCTHSLG 484 (526)
Q Consensus 414 ~~~rn~~ivg~sl~~Gl~~---p-~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~sgi~~g~i~ai~Ln~~~~~~ 484 (526)
| +||.+|+|+++.+|++. | +++++ +|++++++++||+++|+++|++||+++|+|
T Consensus 373 ~-~rn~~ivg~sl~~Glg~~~~p~~~~~~----------------~P~~~~~~l~sgi~~g~l~AilLn~~~~~~ 430 (433)
T PRK11412 373 T-ARNIYRLALPLFVGIFLMALPPVYLQD----------------LPLTLRPLLSNGLLVGILLAVLMENLIPWE 430 (433)
T ss_pred C-cccchhhHHHHHHHhhHHhCCHHHHHH----------------ChHHHHHHHcCcHHHHHHHHHHHHhhcCcc
Confidence 8 79999999999999996 6 58887 799999999999999999999999999963
No 4
>PRK10720 uracil transporter; Provisional
Probab=100.00 E-value=1.6e-67 Score=561.81 Aligned_cols=389 Identities=23% Similarity=0.361 Sum_probs=344.9
Q ss_pred CCccccCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhc-CCcceEEec
Q 037190 19 GVDFCVSSSPPWSEAMILGFQHYLVMLGTTVIIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQTSFG-TRLPVVMGG 97 (526)
Q Consensus 19 ~~~y~~~~~pp~~~~~~~GlQh~l~m~~~~i~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~~G-~rlPiv~G~ 97 (526)
+..|++|||||+++++++|+||+++|+++++++|+++ |+|+++ +++++|++|++|++.+ .|+|++||+
T Consensus 2 ~~~~~~~~~~p~~~~~~lglQhvl~m~~~~i~~Pli~----gl~~~~-------~l~~sGi~TliQ~~~~g~rlP~~~G~ 70 (428)
T PRK10720 2 RRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPILF----HINPAT-------VLLFNGIGTLLYLFICKGKIPAYLGS 70 (428)
T ss_pred CcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhc----CCCHHH-------HHHHHHHHHHHHHHhccCccceEEeC
Confidence 5679999999999999999999999999999999986 788853 7899999999999765 599999999
Q ss_pred chhHHHHHHHHHhccCcccCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhh--hh-HHHHHHhhCchhHHHHHHHHHHHh
Q 037190 98 SYAFNITSISIAASNRFNIYTDPEQRFKESMKTMQGALIMASLFNMLIGFF--GF-GTIFGRFLNPLAAVPLVTLTGLGL 174 (526)
Q Consensus 98 Sf~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~--g~-~~~l~~~~pp~V~G~vi~lIGl~l 174 (526)
||+++++++++.. ++|++++|+++++|+++++++++ ++ ++|++|+|||.|+|.++++||+++
T Consensus 71 sfa~i~~~~~~~~---------------~~~~~~lgav~v~Glv~ills~~~~~~g~~~l~~~fPp~v~G~~i~lIGl~L 135 (428)
T PRK10720 71 SFAFISPVLLLLP---------------LGYEVALGGFIMCGVLFCLVALIVKKAGTGWLDVLFPPAAMGAIVAVIGLEL 135 (428)
T ss_pred cHHHHHHHHHHHH---------------ccHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChHHHHHHHHHHHHHh
Confidence 9999999887653 26899999999999999999996 21 578999999999999999999999
Q ss_pred hhhhccccc-----------hhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 037190 175 YAHGFPQLA-----------KCIEVGLPALIILVLLSQYLPHVMKSKRAIFDRFAILFTVAIVWGYAEILTLTGLYDNRP 243 (526)
Q Consensus 175 ~~~g~~~~~-----------~~~~v~~~~l~~~i~l~~~~~~~~~~~~~~~r~~avLigivvG~~~a~~lg~~g~~~~~~ 243 (526)
.+.++++.+ .++.+++.+++++++++++.| +++|++++++|+++||++++.+|.
T Consensus 136 ~~~~~~~~g~~~~~~~~~~~~~~~lalv~l~iil~~~~~~k-------g~~~~~~iLigIvvG~ila~~lG~-------- 200 (428)
T PRK10720 136 AGVAAGMAGLLPAEGQTPDSKTIIISMVTLAVTVLGSVLFR-------GFLAIIPILIGVLVGYALSFAMGM-------- 200 (428)
T ss_pred HHHHHhhccccCCCCcccchHHHHHHHHHHHHHHHHHHHhc-------cHHHHhHHHHHHHHHHHHHHHhcC--------
Confidence 998876542 245677888777776666654 568999999999999999998863
Q ss_pred CCCCCccccCCCCcCCCCCcccccccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcCCCcceeh
Q 037190 244 PSTQTSCRTDRSGLITAAPWIMVPFPLQWGPPLFNAGDAFAMMAASFVAIIESTGTFIAASRYGSATPMPPCVLSRGIGW 323 (526)
Q Consensus 244 ~~~~~~~~~d~~~~i~~a~~~~~P~~~~fg~P~f~~~~il~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~i~r~l~~ 323 (526)
.|++. +.+++|+++|. |+.|+||+..++.+++.+++.++|++|++.++++..+++..++++.||++.+
T Consensus 201 --------~d~~~-v~~a~~~~lP~---~~~P~fd~~~il~l~~~~lv~~~EsiG~~~a~~~~~~~~~~~~~~~~r~l~a 268 (428)
T PRK10720 201 --------VDTTP-IIEAHWFALPT---FYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFA 268 (428)
T ss_pred --------CCHHH-hhcCccccCCC---CCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCccccchHhh
Confidence 34442 66789999995 6679999999999999999999999999999999987654446789999999
Q ss_pred hhhhhhHhhhcCCCCCCccccchhhhhhhccCCCchHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Q 037190 324 QGLGLLLDGAFGTGSGCAASVENAGLLGLTRNGSRRVVQISAGFMLFFSVLGKFGAILASIPLPIVAALYCVLFAYVASA 403 (526)
Q Consensus 324 dGl~~ilaglfG~~p~~t~s~~n~g~i~~Tgv~SR~~~~~~g~~lillgl~pk~~~li~~IP~~Vlggvli~~f~~i~~~ 403 (526)
||++|+++|+||++|.++++ ||+|+++.||++||+++.++++++++++++||++++++.||.||+||+.+++|+++...
T Consensus 269 dGlatii~glfG~~p~tty~-en~g~ia~T~v~sr~v~~~a~~~li~lg~~pk~~a~ia~iP~pVlgg~~i~~fg~i~~~ 347 (428)
T PRK10720 269 NGLSTVISGFFGSTPNTTYG-ENIGVMAITRVYSTWVIGGAAIIAILLSCVGKLAAAIQAIPLPVMGGVSLLLYGVIGAS 347 (428)
T ss_pred hhHHHHHHHhcCCCCccccc-cccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987765 99999999999999999999999999999999999999999999999999999999999
Q ss_pred hchhc--ccccCCCCccEEeehHHHHhhhhhhHHhhhhhhhcCCCCccccccchhhHHHHHhccchhHHHHHHHHHhhhc
Q 037190 404 GLGLL--QFCNLNSFRSKFILGFSLFTGLSVSRYFNEYLYISGHDPVHTASTSFNNMMQVIFSSPATVAIIVAYFLDCTH 481 (526)
Q Consensus 404 Gi~~l--~~~~~~~~rn~~ivg~sl~~Gl~~p~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~sgi~~g~i~ai~Ln~~~ 481 (526)
|+|.+ ++.|++++||.+|+|+++.+|++... .+ ++.++.+|+..|+++|++||+++
T Consensus 348 Gi~~l~~~~~~~~~~~n~~i~~~~l~~g~~~~~--------------------~~--~~~~~~~gi~~g~~~ai~Lnlll 405 (428)
T PRK10720 348 GIRVLIESKVDYNKAQNLILTSVILIIGVSGAK--------------------VN--IGAAELKGMALATIVGIGLSLIF 405 (428)
T ss_pred HHHHHHHccCCCCcccchhHHHHHHHHHHHHHH--------------------HH--HHHHhcCcHHHHHHHHHHHHHHh
Confidence 99999 88999888899999999999997532 11 56788899999999999999999
Q ss_pred CC
Q 037190 482 SL 483 (526)
Q Consensus 482 ~~ 483 (526)
|.
T Consensus 406 ~~ 407 (428)
T PRK10720 406 KL 407 (428)
T ss_pred cc
Confidence 94
No 5
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=100.00 E-value=3.8e-67 Score=558.64 Aligned_cols=402 Identities=21% Similarity=0.328 Sum_probs=348.1
Q ss_pred CCCccccCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHH-HhcCCcceEEe
Q 037190 18 PGVDFCVSSSPPWSEAMILGFQHYLVMLGTTVIIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQT-SFGTRLPVVMG 96 (526)
Q Consensus 18 ~~~~y~~~~~pp~~~~~~~GlQh~l~m~~~~i~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~-~~G~rlPiv~G 96 (526)
++..|++|||||+++++++|+||+++|+++++++|+++ |+|++ ++++++|++|++|+ .+|+|+|+++|
T Consensus 17 ~~~~~~~d~~~p~~~~~~~GlQh~lam~~~~v~~Plil----gl~~~-------~tl~~sGi~TllQ~~~~G~rlP~v~G 85 (429)
T TIGR03616 17 EHHPVAPDERLPAAQTIVMGLQHAVAMFGATVLMPLLM----GFDPN-------LTILMSGIGTLLFFLITGGRVPSYLG 85 (429)
T ss_pred cCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh----CCCHh-------HHHHHHHHHHHHHHHHhCCCceeEEc
Confidence 55789999999999999999999999999999999996 68875 57999999999997 57999999999
Q ss_pred cchhHHHHHHHHHhccCcccCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhH---HHHHHhhCchhHHHHHHHHHHH
Q 037190 97 GSYAFNITSISIAASNRFNIYTDPEQRFKESMKTMQGALIMASLFNMLIGFFGFG---TIFGRFLNPLAAVPLVTLTGLG 173 (526)
Q Consensus 97 ~Sf~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~g~~---~~l~~~~pp~V~G~vi~lIGl~ 173 (526)
+||++++++.++...... ++ .+++++++|+++++|++++++++++.. ++++|+|||+|+|+++++||++
T Consensus 86 ~sf~f~~~~~~~~~~~~~----~~----~~~~~~a~ga~iv~G~i~~llg~~~~~~~~~~l~r~fpPvV~G~vv~lIGls 157 (429)
T TIGR03616 86 SSAAFVGAVIAATGYNGQ----GT----NPNIALALGGIIACGLVYAAIGLVVMRTGTRWIERLMPPVVTGAVVMAIGLN 157 (429)
T ss_pred CcHHHHHHHHHHHhhccc----CC----cchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCcHHHHHHHHHHHHH
Confidence 999999988765421110 01 136899999999999999999998643 8899999999999999999999
Q ss_pred hhhhhccccc----hhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCc
Q 037190 174 LYAHGFPQLA----KCIEVGLPALIILVLLSQYLPHVMKSKRAIFDRFAILFTVAIVWGYAEILTLTGLYDNRPPSTQTS 249 (526)
Q Consensus 174 l~~~g~~~~~----~~~~v~~~~l~~~i~l~~~~~~~~~~~~~~~r~~avLigivvG~~~a~~lg~~g~~~~~~~~~~~~ 249 (526)
+++.++++.+ ++| .++.+++.++++.++.| +.+|++++|+|+++||++++.++.. ++..
T Consensus 158 L~~vg~~~~~~~~~~~~-~al~tl~~i~l~~l~~~-------~~l~~~avLiGivvG~iva~~l~~~--~g~~------- 220 (429)
T TIGR03616 158 LAPIAVKSVSASGFDSW-MAVLTILCIGAVAVFTR-------GMLQRLLILVGLIAAYLAYFILTNV--FGLG------- 220 (429)
T ss_pred HHHHHHHhccccccccH-HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHhhh--cCCC-------
Confidence 9999998754 233 46667666666666654 5689999999999999999886421 1100
Q ss_pred cccCCCCcCCCCCcccccccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcCCCcceehhhhhhh
Q 037190 250 CRTDRSGLITAAPWIMVPFPLQWGPPLFNAGDAFAMMAASFVAIIESTGTFIAASRYGSATPMPPCVLSRGIGWQGLGLL 329 (526)
Q Consensus 250 ~~~d~~~~i~~a~~~~~P~~~~fg~P~f~~~~il~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~i~r~l~~dGl~~i 329 (526)
+.+|++. +.+++|+++| +|+.|+||++.++.+++.+++.++|++||+.++++..+++. +++++|++.+||++|+
T Consensus 221 ~~vd~s~-v~~a~~~~lP---~~~~p~f~~~~il~~~~~~lv~~~esiG~~~a~~~~~~~~~--~~~i~r~l~adGl~t~ 294 (429)
T TIGR03616 221 KAVDFSP-ISQAAWFGLP---NFHTPVFNANAMLLIAPVALILVAENLGHFKAVAGMTGRNL--DPYMGRAFVGDGLATM 294 (429)
T ss_pred ccccCcc-cccCccccCC---cCCCceEcHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCCC--CchhccchhhhhHHHH
Confidence 1357764 6789999999 57789999999999999999999999999999999987553 3469999999999999
Q ss_pred HhhhcCCCCCCccccchhhhhhhccCCCchHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHHhhchhc-
Q 037190 330 LDGAFGTGSGCAASVENAGLLGLTRNGSRRVVQISAGFMLFFSVLGKFGAILASIPLPIVAALYCVLFAYVASAGLGLL- 408 (526)
Q Consensus 330 laglfG~~p~~t~s~~n~g~i~~Tgv~SR~~~~~~g~~lillgl~pk~~~li~~IP~~Vlggvli~~f~~i~~~Gi~~l- 408 (526)
++|++|+.|.++++ ||+|+++.||++||+++..+++++++++++||++++++.||.||+||+++++|+++..+|+|++
T Consensus 295 ~agl~g~~p~tt~~-en~g~i~~T~v~SR~v~~~a~~~lillgl~Pk~~al~~~IP~pVlgG~~i~~fg~i~~~Gi~~l~ 373 (429)
T TIGR03616 295 LSGSVGGTGVTTYA-ENIGVMAVTKVYSTLVFVAAAVFAILLGFSPKFGALIHTIPVAVLGGASIVVFGLIAVAGARIWV 373 (429)
T ss_pred HHHhcCCCCCccee-eeeeeeeecCcchHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987766 9999999999999999999999999999999999999999999999999999999999999988
Q ss_pred -ccccCCCCccEEeehHHHHhhhhhhHHhhhhhhhcCCCCccccccchhhHHHHHhccchhHHHHHHHHHhhhcCCC
Q 037190 409 -QFCNLNSFRSKFILGFSLFTGLSVSRYFNEYLYISGHDPVHTASTSFNNMMQVIFSSPATVAIIVAYFLDCTHSLG 484 (526)
Q Consensus 409 -~~~~~~~~rn~~ivg~sl~~Gl~~p~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~sgi~~g~i~ai~Ln~~~~~~ 484 (526)
+++|+|++||.+|+|+++.+|++.- +.+++.+++||+++|+++|++||+++|+|
T Consensus 374 ~~~~d~~~~rn~~ivg~sl~~g~g~~----------------------~~~~~~~~~s~i~~~~~~ai~Ln~~l~~~ 428 (429)
T TIGR03616 374 QNKVDLTQNGNLIMVAVTLVLGAGDF----------------------ALTIGAFTLGGIGTATFGAIVLNALLNRD 428 (429)
T ss_pred hccCCcCccceeehhHHHHHHHhHHH----------------------HHHHHHHhhCcHHHHHHHHHHHHHhcCCC
Confidence 7889988889999999999999742 34567889999999999999999999954
No 6
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=100.00 E-value=3.3e-65 Score=543.16 Aligned_cols=392 Identities=28% Similarity=0.457 Sum_probs=352.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhhHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhcCC---cceEEecchhHHH
Q 037190 27 SPPWSEAMILGFQHYLVMLGTTVIIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQTSFGTR---LPVVMGGSYAFNI 103 (526)
Q Consensus 27 ~pp~~~~~~~GlQh~l~m~~~~i~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~~G~r---lPiv~G~Sf~~l~ 103 (526)
|||+++++++|+||+++|+++++++|++++.+. +|++|+++++|++++++|++|++|++..+| +|.++|+||++++
T Consensus 1 ~~~~~~~~~lglQh~l~~~~~~i~~p~iv~~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~i~ 79 (415)
T TIGR00801 1 RPPFLQTLVLGLQHLLAMFGGTVLVPLLVGLAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAFVS 79 (415)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHHHH
Confidence 789999999999999999999999999999999 999999999999999999999999975443 6999999999999
Q ss_pred HHHHHHhccCcccCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhh--h-hHHHHHHhhCchhHHHHHHHHHHHhhhhhcc
Q 037190 104 TSISIAASNRFNIYTDPEQRFKESMKTMQGALIMASLFNMLIGFF--G-FGTIFGRFLNPLAAVPLVTLTGLGLYAHGFP 180 (526)
Q Consensus 104 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~--g-~~~~l~~~~pp~V~G~vi~lIGl~l~~~g~~ 180 (526)
+...+..+ +++++++|+++++|+++++++++ + .++|++|+|||.|+|.++++||+++.+.+++
T Consensus 80 ~~~~~~~~--------------~~~~~~~g~~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv~~IGl~L~~i~l~ 145 (415)
T TIGR00801 80 PMIAIGSG--------------LGIPAIMGALIATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPVVMLIGLSLIPVAVK 145 (415)
T ss_pred HHHHHHhc--------------cCHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHHhHHHHHHHHHHHHHH
Confidence 88766533 36899999999999999999985 3 3478899999999999999999999999887
Q ss_pred ccc--------------hhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 037190 181 QLA--------------KCIEVGLPALIILVLLSQYLPHVMKSKRAIFDRFAILFTVAIVWGYAEILTLTGLYDNRPPST 246 (526)
Q Consensus 181 ~~~--------------~~~~v~~~~l~~~i~l~~~~~~~~~~~~~~~r~~avLigivvG~~~a~~lg~~g~~~~~~~~~ 246 (526)
+++ .++.+++.++++++++.++.| +++|++++++|+++||++++.+|.
T Consensus 146 ~~~g~~~~~~~~~~~~~~~~~vg~~~l~~~vl~~~~~~-------g~~~~~aiLigiv~g~i~a~~lg~----------- 207 (415)
T TIGR00801 146 MAAGGEAAMSSATYGSLENLGVAFVVLALIILLNRFGK-------GFLKSISILIGILVGYILALFMGI----------- 207 (415)
T ss_pred HhccCCCcccccccCchhhHHHHHHHHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHcCC-----------
Confidence 652 135577778777777777654 568999999999999999998863
Q ss_pred CCccccCCCCcCCCCCcccccccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcCCCcceehhhh
Q 037190 247 QTSCRTDRSGLITAAPWIMVPFPLQWGPPLFNAGDAFAMMAASFVAIIESTGTFIAASRYGSATPMPPCVLSRGIGWQGL 326 (526)
Q Consensus 247 ~~~~~~d~~~~i~~a~~~~~P~~~~fg~P~f~~~~il~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~i~r~l~~dGl 326 (526)
+|+++ +.++||+++|.+++|+ |+||+..+..+++++++.++|++|+++++++.+++++++++++||++.+||+
T Consensus 208 -----~~~~~-v~~~~~~~lP~~~~~g-~~f~~~~~~~~~~i~lv~~~es~g~~~a~a~~~g~~~~~~~~~~r~l~adGl 280 (415)
T TIGR00801 208 -----VDFSP-VIDAPWFSLPTPFTFG-PSFEWPAILTMLPVAIVSLVESIGDITATADVSGRDLSGDPRLHRGVLADGL 280 (415)
T ss_pred -----ccchh-hccCcccccCCccCCC-ceecHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCCCCCccccchHHHhhH
Confidence 35443 5678999999988888 7999999999999999999999999999999988765446889999999999
Q ss_pred hhhHhhhcCCCCCCccccchhhhhhhccCCCchHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHHhhch
Q 037190 327 GLLLDGAFGTGSGCAASVENAGLLGLTRNGSRRVVQISAGFMLFFSVLGKFGAILASIPLPIVAALYCVLFAYVASAGLG 406 (526)
Q Consensus 327 ~~ilaglfG~~p~~t~s~~n~g~i~~Tgv~SR~~~~~~g~~lillgl~pk~~~li~~IP~~Vlggvli~~f~~i~~~Gi~ 406 (526)
+|+++|+||++|.++++ ||+|+++.||++||++..++|+++++++++||++++++.||.||+||+++++|+++..+|+|
T Consensus 281 ~~i~aglfG~~p~t~~s-en~g~~~~T~~~sr~~~~~~a~~~i~~~l~pk~~~l~~~iP~~vlgg~~l~~~~~i~~~gi~ 359 (415)
T TIGR00801 281 ATLLAGLFGGFPNTTFA-QNIGVIALTRVASRWVIVGAAVILIALGFFPKIAALITSIPSPVLGGASIVMFGMIAASGIR 359 (415)
T ss_pred HHHHHHhcCCCCCcchh-hhheeeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999997755 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCCccEEeehHHHHhhhhh---hHHhhhhhhhcCCCCccccccchhhHHHHHhccchhHHHHHHHHHhhh
Q 037190 407 LLQFCNLNSFRSKFILGFSLFTGLSV---SRYFNEYLYISGHDPVHTASTSFNNMMQVIFSSPATVAIIVAYFLDCT 480 (526)
Q Consensus 407 ~l~~~~~~~~rn~~ivg~sl~~Gl~~---p~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~sgi~~g~i~ai~Ln~~ 480 (526)
.+.+.++|++||++++|+|+.+|+++ |+++++ +| +++||+++|+++|++||++
T Consensus 360 ~l~~~~~~~~r~~~i~~~s~~~g~~~~~~p~~~~~----------------~p-----~~~~g~~~g~~~ai~Ln~~ 415 (415)
T TIGR00801 360 ILIRNKLDNRRNRNIIAASVGLGLGVTGVPDIFGN----------------FP-----LLLSGIALAGIVAILLNLI 415 (415)
T ss_pred HHHhCccCcccceehHHHHHHHHHHHhccHHHHhh----------------Cc-----hhcccHHHHHHHHHHHhcC
Confidence 99999998789999999999999997 888766 57 7899999999999999974
No 7
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=100.00 E-value=1.1e-64 Score=538.46 Aligned_cols=388 Identities=31% Similarity=0.503 Sum_probs=350.7
Q ss_pred HHHHHHHHHHHHhhHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHH----HhcCCcceEEecchhHHHHHHHHHhcc
Q 037190 37 GFQHYLVMLGTTVIIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQT----SFGTRLPVVMGGSYAFNITSISIAASN 112 (526)
Q Consensus 37 GlQh~l~m~~~~i~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~----~~G~rlPiv~G~Sf~~l~~~~~i~~~~ 112 (526)
|+||+++|+++++++|++++++.|+|++|+..++|++++++|++|++|+ .+|+|+|+++|+|++++++.......
T Consensus 1 ~~Qh~l~~~~~~i~~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~- 79 (406)
T TIGR03173 1 GLQHVLAMYAGAVAVPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAG- 79 (406)
T ss_pred CccchHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhh-
Confidence 6899999999999999999999999999999999999999999999998 46899999999999999887665432
Q ss_pred CcccCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhCchhHHHHHHHHHHHhhhhhccccc---------
Q 037190 113 RFNIYTDPEQRFKESMKTMQGALIMASLFNMLIGFFGFGTIFGRFLNPLAAVPLVTLTGLGLYAHGFPQLA--------- 183 (526)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~g~~~~l~~~~pp~V~G~vi~lIGl~l~~~g~~~~~--------- 183 (526)
+++++++|+++++|++++++| ++++|++|+|||+|+|.++++||+++.+.++++..
T Consensus 80 -------------~~~~~~~ga~~v~Gii~illg--~~~~~l~~~iPp~v~G~~i~~IGl~l~~~~~~~~~g~~~~~~~~ 144 (406)
T TIGR03173 80 -------------GGLGAIFGAVIVAGLFVILLA--PFFSKLVRFFPPVVTGTVITLIGLSLMPVAINWAAGGAGAPDFG 144 (406)
T ss_pred -------------hhHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHhccCCCccccc
Confidence 379999999999999999999 46799999999999999999999999988876542
Q ss_pred --hhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCCCC
Q 037190 184 --KCIEVGLPALIILVLLSQYLPHVMKSKRAIFDRFAILFTVAIVWGYAEILTLTGLYDNRPPSTQTSCRTDRSGLITAA 261 (526)
Q Consensus 184 --~~~~v~~~~l~~~i~l~~~~~~~~~~~~~~~r~~avLigivvG~~~a~~lg~~g~~~~~~~~~~~~~~~d~~~~i~~a 261 (526)
+++.+++.++++++++.++. |+++|++++++++++||++++.++. .|++. +.++
T Consensus 145 ~~~~~~l~l~~l~~~il~~~~~-------~~~~~~~aiLi~ivvg~iva~~~g~----------------~~~~~-i~~~ 200 (406)
T TIGR03173 145 SPQNLGLALLTLVIILLLNRFG-------KGFLRSIAVLLGLVVGTIVAAALGM----------------VDFSG-VAEA 200 (406)
T ss_pred chHHHHHHHHHHHHHHHHHHHh-------hhHHHHhHHHHHHHHHHHHHHHhcC----------------CCchh-hccC
Confidence 23567777777666665554 4568999999999999999998863 24432 5678
Q ss_pred CcccccccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcCCCcceehhhhhhhHhhhcCCCCCCc
Q 037190 262 PWIMVPFPLQWGPPLFNAGDAFAMMAASFVAIIESTGTFIAASRYGSATPMPPCVLSRGIGWQGLGLLLDGAFGTGSGCA 341 (526)
Q Consensus 262 ~~~~~P~~~~fg~P~f~~~~il~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~i~r~l~~dGl~~ilaglfG~~p~~t 341 (526)
||+.+|.+++|+.|+||+..+..++.++++.++|++|+.+++++..+++. +++++||++.+||++|+++|+||++|.|+
T Consensus 201 ~~~~~P~~~~~~~P~f~~~~~~~~~~~~lv~~~esig~~~a~~~~~g~~~-~~~~~~~~l~~~Gi~~i~aglfG~~p~t~ 279 (406)
T TIGR03173 201 PWFALPTPFHFGAPTFDLVAILTMIIVYLVSMVETTGDFLALGEITGRPI-TEKDLAGGLRADGLGSALGGLFNTFPYTS 279 (406)
T ss_pred CeeeCCCCCcCCCCeeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-CchhccchHHhccHHHHHHHHhCCCCCcc
Confidence 99999998889999999999999999999999999999999999987643 46789999999999999999999999877
Q ss_pred cccchhhhhhhccCCCchHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHHhhchhcccccCCCCccEEe
Q 037190 342 ASVENAGLLGLTRNGSRRVVQISAGFMLFFSVLGKFGAILASIPLPIVAALYCVLFAYVASAGLGLLQFCNLNSFRSKFI 421 (526)
Q Consensus 342 ~s~~n~g~i~~Tgv~SR~~~~~~g~~lillgl~pk~~~li~~IP~~Vlggvli~~f~~i~~~Gi~~l~~~~~~~~rn~~i 421 (526)
++ ||+|++..||++||++..++|+++++++++||++++++.||.||+||+++++|+++...|+|.+++.|+|++||.+|
T Consensus 280 ~~-~~~~~~~~tg~~sr~~~~~~~~~lil~~l~~~~~~l~~~iP~~vlgg~~l~~~~~i~~~g~~~l~~~~~~~~rn~~i 358 (406)
T TIGR03173 280 FS-QNVGLVQLTGVKSRYVVAAAGVILVLLGLFPKLAALVASIPQPVLGGAGLVMFGMVAASGIRILSKVDFDRRRNLLI 358 (406)
T ss_pred hh-hhHHHHHHhCCCchHhHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhCcccCcceehh
Confidence 55 99999999999999999999999999999999999999999999999999999999999999999999998889999
Q ss_pred ehHHHHhhhhh---hHHhhhhhhhcCCCCccccccchhhHHHHHhccchhHHHHHHHHHhhhcC
Q 037190 422 LGFSLFTGLSV---SRYFNEYLYISGHDPVHTASTSFNNMMQVIFSSPATVAIIVAYFLDCTHS 482 (526)
Q Consensus 422 vg~sl~~Gl~~---p~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~sgi~~g~i~ai~Ln~~~~ 482 (526)
+|+++.+|++. |+++++ +|++++++++||+++|+++|++||+++|
T Consensus 359 ~g~~~~~g~~~~~~p~~~~~----------------~p~~~~~~~~~~~~~g~~~ai~l~~~~p 406 (406)
T TIGR03173 359 VAVSLGLGLGPTVVPEFFSQ----------------LPAWAQTLFSSGIAVGAISAILLNLLFN 406 (406)
T ss_pred hHHHHHHHHHHHhhHHHHHH----------------ChHHHHHHHhCcHHHHHHHHHHHHhhcC
Confidence 99999999974 988887 7999999999999999999999999987
No 8
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=100.00 E-value=3.1e-60 Score=501.69 Aligned_cols=371 Identities=31% Similarity=0.545 Sum_probs=282.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHH-hcCCcceEEecchhHHHHHHHHH
Q 037190 31 SEAMILGFQHYLVMLGTTVIIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQTS-FGTRLPVVMGGSYAFNITSISIA 109 (526)
Q Consensus 31 ~~~~~~GlQh~l~m~~~~i~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~-~G~rlPiv~G~Sf~~l~~~~~i~ 109 (526)
+|++++|+||+++|++.++++|.++++++|+ ++|+.++++++++++|++|++|++ +|+|+|+++|+|+.+++......
T Consensus 1 ~~~i~~glQ~~l~m~~~~iv~P~il~~~~g~-~~~~~~li~at~l~sgi~Tllq~~~~g~~lpl~~G~s~~~~~~~~~~~ 79 (389)
T PF00860_consen 1 GKEILLGLQHFLAMFYIIIVVPLILAAAFGL-DADTAALISATFLVSGIATLLQGLPAGHRLPLVPGPSFAFIFAFMIVI 79 (389)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHTTTS------------HHHHHHHHHHHHHHHHHHTTT-----EEE-GGGHHHHHGGG
T ss_pred CccHHHHHHHHHHHHHHHHHhHHHHhhcccc-cchhhHHHHHHHHHHHHHHHHHHhcCCCceecccccchhhhhhhhccc
Confidence 5899999999999999999999999999999 778889999999999999999998 89999999999999987332221
Q ss_pred hccCcccCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhCchhHHHHHHHHHHHhhhhhccccch-----
Q 037190 110 ASNRFNIYTDPEQRFKESMKTMQGALIMASLFNMLIGFFGFGTIFGRFLNPLAAVPLVTLTGLGLYAHGFPQLAK----- 184 (526)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~g~~~~l~~~~pp~V~G~vi~lIGl~l~~~g~~~~~~----- 184 (526)
... +.+.+++++++|+++++|++++++++++.++|++|+|||.|.|.++++||+++.+.++++.+.
T Consensus 80 g~~---------~~~~~~~~~~~g~~~i~gi~~~~l~~~g~~~~l~~~~pp~v~g~v~~~IGl~L~~~~~~~~~~~~~~~ 150 (389)
T PF00860_consen 80 GMA---------ESGGYGLQAALGAVLISGILFILLGLTGLRKRLRRLFPPVVKGAVVLLIGLSLAPIGLKNAGGIWGNP 150 (389)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHHHHHTT-SH-HHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSS---B
T ss_pred ccc---------cchhhchhhhhhHHHHHHHHHHHHHHhchHHHHHHHhChhheEeeEeeehhhhhhhHhhccccccccc
Confidence 110 234578999999999999999999999999999999999999999999999999998877542
Q ss_pred ---------hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCccccCCC
Q 037190 185 ---------CIEVGLPALIILVLLSQYLPHVMKSKRAIFDRFAILFTVAIVWGYAEILTLTGLYDNRPPSTQTSCRTDRS 255 (526)
Q Consensus 185 ---------~~~v~~~~l~~~i~l~~~~~~~~~~~~~~~r~~avLigivvG~~~a~~lg~~g~~~~~~~~~~~~~~~d~~ 255 (526)
+..++..+++..+.++++. ++++|++++++|+++||++++.++. +|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ailigi~~g~i~~~~~g~----------------~~~~ 207 (389)
T PF00860_consen 151 DGLLVGDGKNLGLAVLTLLFILLLSLFL-------KGFLRKGAILIGIIAGWIVAAILGV----------------VDFS 207 (389)
T ss_dssp TT-B---HHHHHHHHHHHHHHHHHHHSS-------STTTTTHHHHHHHHHHHHHHHHHHH----------------TTSS
T ss_pred cccccccccccccccccchhhhhhhhhh-------hhhcccccchhhhhhhhhhhhcccc----------------cccC
Confidence 1234445555555555553 4678999999999999999999984 3444
Q ss_pred CcCCCCCcccccccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcCCCcceehhhhhhhHhhhcC
Q 037190 256 GLITAAPWIMVPFPLQWGPPLFNAGDAFAMMAASFVAIIESTGTFIAASRYGSATPMPPCVLSRGIGWQGLGLLLDGAFG 335 (526)
Q Consensus 256 ~~i~~a~~~~~P~~~~fg~P~f~~~~il~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~i~r~l~~dGl~~ilaglfG 335 (526)
+.+.++||+.+|++++|++|+||+.+++.++..+++.++|++||+.++++..++++++++++||++.+||++|+++|+||
T Consensus 208 ~~~~~~~~~~~p~~~~~g~p~f~~~~i~~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~~~r~l~~dg~~~~l~gl~G 287 (389)
T PF00860_consen 208 PSVSSAPWFSLPSPFPFGWPSFDPGAILTFLIFALVAMFESIGTIVAVARIAGKDDPRPPRIRRGLLADGLGTILAGLFG 287 (389)
T ss_dssp H-HHHS-SS--------------HHHHHHHTHHHHHHHHHHHHHHHHHHHHHTS-TCCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred cccccccccccccccccccccccHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCCccchhhcccceeeeeeeeechhhc
Confidence 32678999999999999999999999999999999999999999999999999877668999999999999999999999
Q ss_pred CCCCCccccchhhhhhhccCCCchHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHHhhchhcccccCCC
Q 037190 336 TGSGCAASVENAGLLGLTRNGSRRVVQISAGFMLFFSVLGKFGAILASIPLPIVAALYCVLFAYVASAGLGLLQFCNLNS 415 (526)
Q Consensus 336 ~~p~~t~s~~n~g~i~~Tgv~SR~~~~~~g~~lillgl~pk~~~li~~IP~~Vlggvli~~f~~i~~~Gi~~l~~~~~~~ 415 (526)
+.|.|+++ ||+|.++.||++|||++..+++++++++++||++++++.||.||++|++++++++++.+|+|++++.|+||
T Consensus 288 ~~~~t~~~-en~g~i~~t~v~Sr~~~~~a~~~~i~~~~~p~~~~l~~~IP~~v~gg~~lv~~g~i~~~gi~~i~~~~~~~ 366 (389)
T PF00860_consen 288 TSPTTTYS-ENAGGIAATGVASRRVGLTAGVILILFGLSPKFAPLFASIPSPVIGGPLLVLFGMIMMSGIRNIDWVDLDS 366 (389)
T ss_dssp ---EEE-H-HHHHHHHHHTB--HHHHHHHHHHHHHHT--HHHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHHHHTTS-S
T ss_pred CCCCcccc-ccchhhhhhccccceeeeHHHHHHHHHhhHHHHHHHHHHHHHHHhccchHHHHHHHHHHHhHhheecccCc
Confidence 99887766 99999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CccEEeehHHHHhhhhhhHH
Q 037190 416 FRSKFILGFSLFTGLSVSRY 435 (526)
Q Consensus 416 ~rn~~ivg~sl~~Gl~~p~~ 435 (526)
+||.+++++++.+|++++.+
T Consensus 367 ~r~~~iv~~~l~~g~~i~~~ 386 (389)
T PF00860_consen 367 ARNAFIVGLSLPLGLSIAFG 386 (389)
T ss_dssp HHHHHHHHHHHHHHHH----
T ss_pred cccHHHHHHhHHHHHHHhcc
Confidence 99999999999999998643
No 9
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism]
Probab=99.95 E-value=1.7e-25 Score=233.79 Aligned_cols=383 Identities=16% Similarity=0.194 Sum_probs=269.7
Q ss_pred CCCCccccCCCC-CHHHHHHHHHHHHHHHHHHHhhHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCcceEE
Q 037190 17 LPGVDFCVSSSP-PWSEAMILGFQHYLVMLGTTVIIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQTSFGTRLPVVM 95 (526)
Q Consensus 17 ~~~~~y~~~~~p-p~~~~~~~GlQh~l~m~~~~i~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~~G~rlPiv~ 95 (526)
.-|..|+++|+- ..++|+..|++.+++|.+...++|.++++ .|+| ...+..++++.++++|+++.++ .|+|+.+
T Consensus 5 ~~~~~F~l~~~~t~vrtEiiAGlTTFltM~YIl~VnP~IL~~-ag~~---~~av~~AT~l~a~~gs~~mgl~-An~P~al 79 (436)
T COG2252 5 DLDRFFKLKEHGTTVRTEVIAGLTTFLTMAYIVFVNPQILGA-AGMP---VGAVFVATCLAAAIGSIAMGLY-ANLPIAL 79 (436)
T ss_pred HHHHHhCccccCchHHHHHHHHHHHHHHHHHhheecHHHHHh-cCCC---chhHHHHHHHHHHHHHHHHHHH-HcCchhh
Confidence 346789999986 58999999999999999999999999987 4567 3567788999999999999987 9999999
Q ss_pred ecch---hHHHHHHHHHhccCcccCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhCchhHHHHHHHHHH
Q 037190 96 GGSY---AFNITSISIAASNRFNIYTDPEQRFKESMKTMQGALIMASLFNMLIGFFGFGTIFGRFLNPLAAVPLVTLTGL 172 (526)
Q Consensus 96 G~Sf---~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~g~~~~l~~~~pp~V~G~vi~lIGl 172 (526)
+|.- ++. ..++...++ ..||+++++++++|+++++++++|+++|++|.+|...--.+...||+
T Consensus 80 apgmglnAfF--aftvv~~~g------------i~wq~AL~aVF~sGiif~ils~t~iR~~ii~~IP~~lk~ai~aGIGl 145 (436)
T COG2252 80 APGMGLNAFF--AFTVVLGMG------------LSWQVALGAVFLSGIIFLLLSLTGIREWIINAIPRSLKLAIGAGIGL 145 (436)
T ss_pred cchhhHHHHH--HHHHHHhcC------------CcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHH
Confidence 9742 221 123333333 26999999999999999999999999999999996554444455555
Q ss_pred Hhhhhhccccc----------------h-hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHh
Q 037190 173 GLYAHGFPQLA----------------K-CIEVGLPALIILVLLSQYLPHVMKSKRAIFDRFAILFTVAIVWGYAEILTL 235 (526)
Q Consensus 173 ~l~~~g~~~~~----------------~-~~~v~~~~l~~~i~l~~~~~~~~~~~~~~~r~~avLigivvG~~~a~~lg~ 235 (526)
.+...++++.+ + ...+++..+++++.+ ..+|+ ..+++++++..+++++++|.
T Consensus 146 Fia~IgL~~~Givv~~~~tlv~LG~~~~p~vll~i~G~~l~~~L--~~~~i---------~Gaili~i~~~t~~g~~~g~ 214 (436)
T COG2252 146 FIALIGLKNAGIVVANPATLVALGDFTSPGVLLAILGLLLIIVL--VSRKI---------KGAILIGILVTTILGIILGI 214 (436)
T ss_pred HHHHHHHhhCCeEEecCcceEEeecCCCchHHHHHHHHHHHHHH--HHhhc---------cHhhhHHHHHHHHHHHHhcc
Confidence 44444444322 1 234455555555544 22222 57899999999999999974
Q ss_pred cCCCCCCCCCCCCccccCCCCcCCCCCcccccccccccCc--cccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC-
Q 037190 236 TGLYDNRPPSTQTSCRTDRSGLITAAPWIMVPFPLQWGPP--LFNAGDAFAMMAASFVAIIESTGTFIAASRYGSATPM- 312 (526)
Q Consensus 236 ~g~~~~~~~~~~~~~~~d~~~~i~~a~~~~~P~~~~fg~P--~f~~~~il~~~~~~lv~~~esig~~~av~~~~~~~~~- 312 (526)
.. +.. +....-|. -.|...+.+.. ...+..+...+...++..+|++|+..++++..+..++
T Consensus 215 ~~--~~~-------------~~~~~~p~-~~~~~~~~d~~~~~~~~~~~~~if~f~~~~~FD~~GTl~gv~~~ag~~~~~ 278 (436)
T COG2252 215 DV--HFG-------------GLVGAPPS-LSPIFGQLDLSGNLSLAAFAPVIFTFFFVDLFDTLGTLIGVASKAGLLDKN 278 (436)
T ss_pred cc--ccc-------------ccccCCCC-ccchhhHhhhccchhhHHHHHHHHHHHHHHHhcchHHHHHHHHhcCCcCCC
Confidence 21 000 00001010 01111111111 1124455567789999999999999999998875432
Q ss_pred -CCcCCCcceehhhhhhhHhhhcCCCCCCccccchhhhhhhccCCCchHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHH
Q 037190 313 -PPCVLSRGIGWQGLGLLLDGAFGTGSGCAASVENAGLLGLTRNGSRRVVQISAGFMLFFSVLGKFGAILASIPLPIVAA 391 (526)
Q Consensus 313 -~~~~i~r~l~~dGl~~ilaglfG~~p~~t~s~~n~g~i~~Tgv~SR~~~~~~g~~lillgl~pk~~~li~~IP~~Vlgg 391 (526)
+.++.+|.+.+|++++++++++|+.|.++ |.|+...++.-|-+.-.+.+.+-++++.+- ++++...+|..+.++
T Consensus 279 g~~~~~~~al~~D~v~t~~ga~~GtS~~t~-yIESaaGva~GgrTGltavv~g~lFl~~lf----~~Pl~~~vP~~Atap 353 (436)
T COG2252 279 GKMPRIGKALLADSVATVVGALFGTSTVTA-YIESAAGVAAGGRTGLTAVVTGLLFLLSLF----FSPLAALVPGYATAP 353 (436)
T ss_pred CCccccchHHHHhHHHHHHHHhcCCcchhh-hhhcccccccccccccHHHHHHHHHHHHHH----HHHHHHhCcHhhhhH
Confidence 24689999999999999999999998755 559988877555444455666666666643 345899999999999
Q ss_pred HHHHHHHHHHHhhchhcccccCCCCccEEeehHHHHhhhhhhHHhhhhhhhcCCCCccccccchhhHHHHHhccchhHHH
Q 037190 392 LYCVLFAYVASAGLGLLQFCNLNSFRSKFILGFSLFTGLSVSRYFNEYLYISGHDPVHTASTSFNNMMQVIFSSPATVAI 471 (526)
Q Consensus 392 vli~~f~~i~~~Gi~~l~~~~~~~~rn~~ivg~sl~~Gl~~p~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~sgi~~g~ 471 (526)
++++ .|.++. +.++++||+|..+ ++|.++.... +| +.+-..+|++.|.
T Consensus 354 aLi~-vG~lM~---~~v~~id~~d~~e------------a~PaF~tiv~--------------mp--lTySIa~Gia~Gf 401 (436)
T COG2252 354 ALII-VGALML---SSVKQIDWSDFTE------------AVPAFLTIVM--------------MP--LTYSIADGIAFGF 401 (436)
T ss_pred HHHH-HHHHHH---hhhccCCchhhhh------------hhHHHHHHHH--------------HH--HHHHHHhhHHHHH
Confidence 9987 455555 4556778876433 2366655431 34 5667789999999
Q ss_pred HHHHHHhhhcC
Q 037190 472 IVAYFLDCTHS 482 (526)
Q Consensus 472 i~ai~Ln~~~~ 482 (526)
+.+.+++....
T Consensus 402 i~y~i~k~~~g 412 (436)
T COG2252 402 ISYVILKVFTG 412 (436)
T ss_pred HHHHHHHHHhh
Confidence 99999988543
No 10
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=99.95 E-value=7.6e-25 Score=228.33 Aligned_cols=319 Identities=17% Similarity=0.157 Sum_probs=239.0
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCcceEEecchhHHHHHHHHHhc
Q 037190 32 EAMILGFQHYLVMLGTTVIIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQTSFGTRLPVVMGGSYAFNITSISIAAS 111 (526)
Q Consensus 32 ~~~~~GlQh~l~m~~~~i~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~~G~rlPiv~G~Sf~~l~~~~~i~~~ 111 (526)
..+..|+-.+++-+++.+++-+-.+++.|+|++|.+.|+++.++++|++|++|++. +|+|+++++|. . +..+.+...
T Consensus 22 s~~~aG~va~lvg~~~~~~iv~~a~~~~g~s~aq~~swl~a~~~~~Gl~ti~lS~~-~r~Pi~~awSt-P-GaAll~~~~ 98 (395)
T TIGR00843 22 PTLIAGFLAVLIGYAGPAAIFFQAAIKAGASTAMIIGWITAIGIAAAVSGIFLSIR-FKTPVLTAWSA-P-GAALLVTGF 98 (395)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCeeeecCc-h-HHHHHHHhc
Confidence 57889999999999998887777778899999999999999999999999999985 79999999992 2 222222222
Q ss_pred cCcccCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhCchhHHHHHHHHHHHhhhhhccccchhhhhHHH
Q 037190 112 NRFNIYTDPEQRFKESMKTMQGALIMASLFNMLIGFFGFGTIFGRFLNPLAAVPLVTLTGLGLYAHGFPQLAKCIEVGLP 191 (526)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~g~~~~l~~~~pp~V~G~vi~lIGl~l~~~g~~~~~~~~~v~~~ 191 (526)
.+ .+++++.|+.+++|++.+++|++|+++|++|++|+.+.+.++..+.+.+....++...+.+.++..
T Consensus 99 ~~------------~~~~eavGAfiv~g~lilllGltG~f~rl~~~IP~~Va~amLAGIlL~f~l~~~~a~~~~pll~~~ 166 (395)
T TIGR00843 99 PG------------ISLNEAIAAFITAAALIFLCGITGLFAKLLKIIPHGIAAAMLAGILFQFGLGAFAALDGLFLICFS 166 (395)
T ss_pred CC------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 11 368999999999999999999999999999999999999988766555433333334445555544
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCCCCCccccccccc
Q 037190 192 ALIILVLLSQYLPHVMKSKRAIFDRFAILFTVAIVWGYAEILTLTGLYDNRPPSTQTSCRTDRSGLITAAPWIMVPFPLQ 271 (526)
Q Consensus 192 ~l~~~i~l~~~~~~~~~~~~~~~r~~avLigivvG~~~a~~lg~~g~~~~~~~~~~~~~~~d~~~~i~~a~~~~~P~~~~ 271 (526)
.++..++ +||+.+++++++++++|.++++..|.. |..+ +.. + +..| .
T Consensus 167 mll~~l~-----------~~r~~Pr~avl~aLlvG~iva~~~G~~----------------~~~~-~~~-~-l~~p---~ 213 (395)
T TIGR00843 167 MLLCWLA-----------SKAFAPRYAMIAALICGIAFSFALGDM----------------NPTD-LDF-K-IALP---Q 213 (395)
T ss_pred HHHHHHH-----------HHHhcchHHHHHHHHHHHHHHHHhcCC----------------Cccc-ccc-c-cccc---e
Confidence 4333322 134567899999999999999888632 1111 110 1 2223 5
Q ss_pred ccCccccHHHHHHH-HHHHHHHHHHHHHHHHHHhhhcCCCCCCCcCCCcceehhhhhhhHhhhcCCCCCCccccchhhhh
Q 037190 272 WGPPLFNAGDAFAM-MAASFVAIIESTGTFIAASRYGSATPMPPCVLSRGIGWQGLGLLLDGAFGTGSGCAASVENAGLL 350 (526)
Q Consensus 272 fg~P~f~~~~il~~-~~~~lv~~~esig~~~av~~~~~~~~~~~~~i~r~l~~dGl~~ilaglfG~~p~~t~s~~n~g~i 350 (526)
|..|+||+...+.. ++.+++.+......-.++.|..++++ +.|+-+..+|++|++++.||+++. |.+.+
T Consensus 214 ~~~P~fs~~a~~~l~lPl~~vtm~~qnlpgiavl~aaGy~~----p~~~~~~~tGl~sll~ApfGg~~~------nlaai 283 (395)
T TIGR00843 214 FIAPDFSFAHSLNLALPLFLVSLAGQFAPGIAALKAAGYNA----PAKPIIAAAGLAALFAAFAGGISI------GIAAI 283 (395)
T ss_pred eeCCCCCHHHHHHHHHHHHHHHHHhcCchHHHHHHHcCCCC----CchHHHHHHHHHHHHHhccCCchh------hhhHH
Confidence 67899999888765 58889998877666677778777543 368999999999999999999972 33333
Q ss_pred hhccC---------CCch-HHHHHHHHHHHHHHh-hHHHHHHHhCCHHHHHHH-HHHHHHHHHHhhchhc
Q 037190 351 GLTRN---------GSRR-VVQISAGFMLFFSVL-GKFGAILASIPLPIVAAL-YCVLFAYVASAGLGLL 408 (526)
Q Consensus 351 ~~Tgv---------~SR~-~~~~~g~~lillgl~-pk~~~li~~IP~~Vlggv-li~~f~~i~~~Gi~~l 408 (526)
..+-| ..|| ..+.+|++.+++|++ +.+..+++.+|.+.+..+ .+.+++.+..+=-+.+
T Consensus 284 taAic~G~~ah~d~~rR~~a~i~~Gv~yll~glfag~i~~l~~~~P~~li~~laGlAll~~~~~~l~~a~ 353 (395)
T TIGR00843 284 TAAICMGKDAHEDKDKRWIAAAAAGIFYLLAGLFAGAITALFAALPKELIAALAGLALLGAIAGNIKIAL 353 (395)
T ss_pred hHHHhcCcccccCcCccchHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33222 2344 478899999999999 789999999999999984 6678888776544433
No 11
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=99.93 E-value=3.7e-23 Score=226.46 Aligned_cols=318 Identities=18% Similarity=0.225 Sum_probs=234.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHh--hhcCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCcceEEecchhHHHHHHH
Q 037190 30 WSEAMILGFQHYLVMLGTTVIIPTTLV--PLMGGGNVEKAQVINTSLFVAGINTLLQTSFGTRLPVVMGGSYAFNITSIS 107 (526)
Q Consensus 30 ~~~~~~~GlQh~l~m~~~~i~~Plii~--~a~gl~~~~~~~li~~~l~~sGi~Tllq~~~G~rlPiv~G~Sf~~l~~~~~ 107 (526)
+...+++|+.-.+..+ |..++ .+.|+|+ ...++++-++.++.++||.+--.+.|+..+....+..
T Consensus 21 l~~Dl~AGltva~val------P~ama~a~~aGv~p-------~~GLyas~i~~~v~alfGgs~~~i~GPt~a~~~v~a~ 87 (554)
T COG0659 21 LRGDLLAGLTVAAVAL------PLAMAFAIAAGVPP-------EAGLYASIVAGIIYALFGGSRGLISGPTGAFAVVLAA 87 (554)
T ss_pred hHHHHHHHHHHHHHHh------HHHHHHHHHcCCCH-------HHHHHHHHHHHHHHHHHcCCccceeccchhhHHHHHH
Confidence 6678999998765544 44443 3479999 6899999999999999988888899987665444444
Q ss_pred HHhccCcccCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhCchhHHHHHHHHHHHhhhhhcccc-c---
Q 037190 108 IAASNRFNIYTDPEQRFKESMKTMQGALIMASLFNMLIGFFGFGTIFGRFLNPLAAVPLVTLTGLGLYAHGFPQL-A--- 183 (526)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~g~~~~l~~~~pp~V~G~vi~lIGl~l~~~g~~~~-~--- 183 (526)
+.+... .++++.+.-+.+++|++++++|++|+ +++.+++|+.|+-.++..||+.++..+++.+ +
T Consensus 88 ~i~~~~-----------~~g~~~~~~~tllaGv~~i~~G~lRL-G~li~fip~pVl~Gf~~Giai~I~~~Ql~~~~G~~~ 155 (554)
T COG0659 88 VIASLV-----------ETGLALAFLATLLAGVFQILLGLLRL-GRLIRFIPRPVLIGFTAGIAILIILTQLPVLLGLAS 155 (554)
T ss_pred HHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhhhccHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 443110 25789999999999999999999997 9999999976666688999987776555332 1
Q ss_pred ------------------hh---hhhHHHHHHHHHHHHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhcCCCCCC
Q 037190 184 ------------------KC---IEVGLPALIILVLLSQYLPHVMKSKRAIFDRFAILFTVAIVWGYAEILTLTGLYDNR 242 (526)
Q Consensus 184 ------------------~~---~~v~~~~l~~~i~l~~~~~~~~~~~~~~~r~~avLigivvG~~~a~~lg~~g~~~~~ 242 (526)
.+ ..+++.++.+++.+.++ ..|.++.++++++++.+++.++....
T Consensus 156 ~~~~~~~~~~~l~~~~~~~~~~~~~lg~~~l~il~~~~~~----------~~~~P~~liaiv~~t~i~~~~~~~~~---- 221 (554)
T COG0659 156 KVSGFWAKVSALFTVLLTINLATLLLGLLTLAILLFLPRL----------TPRIPSPLIALVLGTLIVWIFPLDSL---- 221 (554)
T ss_pred cccchHHHHHHHHHhcccccHHHHHHHHHHHHHHHHccch----------hhhCCcHHHHHHHHHHHHHHhcCCch----
Confidence 01 22334444333332222 13567889999999999998864210
Q ss_pred CCCCCCccccCCCCcCCCCCcccccccc-cccCccccHHHH----HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcCC
Q 037190 243 PPSTQTSCRTDRSGLITAAPWIMVPFPL-QWGPPLFNAGDA----FAMMAASFVAIIESTGTFIAASRYGSATPMPPCVL 317 (526)
Q Consensus 243 ~~~~~~~~~~d~~~~i~~a~~~~~P~~~-~fg~P~f~~~~i----l~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~i 317 (526)
+.+ +...+ +|..+ +|+.|.++++.+ ...+.++++.++|++.+..+.+++.++ +.+.
T Consensus 222 --------~~G--~i~~~-----lp~~~~~~~~P~~~~~~~~~l~~~al~la~lg~iesllta~~~~~~~~~----~~d~ 282 (554)
T COG0659 222 --------RYG--EIPGS-----LPSGLPHFRLPNVSLSLLLALLPYALALALLGLLESLLTAVSFDGMTGT----KHDS 282 (554)
T ss_pred --------hcc--cCccc-----CCcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CCCC
Confidence 011 00111 22211 355566665444 445689999999999999999998764 4778
Q ss_pred CcceehhhhhhhHhhhcCCCCCCccccchhhhhhhccCCCchHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHH-H
Q 037190 318 SRGIGWQGLGLLLDGAFGTGSGCAASVENAGLLGLTRNGSRRVVQISAGFMLFFSVLGKFGAILASIPLPIVAALYCV-L 396 (526)
Q Consensus 318 ~r~l~~dGl~~ilaglfG~~p~~t~s~~n~g~i~~Tgv~SR~~~~~~g~~lillgl~pk~~~li~~IP~~Vlggvli~-~ 396 (526)
||++.+||++|+.+|+||++|.|.++ .+......+|.+||.+.++++++++++-++ ++.++..||.+++++++++ .
T Consensus 283 nrELiaqGiaNi~sglfgg~p~~g~~-srS~~nv~sGarT~lsgi~~a~~lll~l~~--~~~~~~~IP~a~Laavli~v~ 359 (554)
T COG0659 283 NRELIAQGIANIASGLFGGIPATGSI-SRSAINIKSGARTRLSGIIHAALLLLLLLF--LAPLVSYIPLAALAAVLILVG 359 (554)
T ss_pred CHHHHHhhHHHHHHHHhCCccccchh-HHHHHHHHhCCcChHHHHHHHHHHHHHHHH--HHHHHHhCcHHHHHHHHHHHH
Confidence 99999999999999999999999888 677777789999999999999988887765 7889999999999998775 6
Q ss_pred HHHHHHhhchhc
Q 037190 397 FAYVASAGLGLL 408 (526)
Q Consensus 397 f~~i~~~Gi~~l 408 (526)
+.++....++.+
T Consensus 360 ~~l~~~~~~~~~ 371 (554)
T COG0659 360 WGLLDWSLLKPL 371 (554)
T ss_pred HHhccHHHHHHH
Confidence 777777666654
No 12
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=99.91 E-value=1e-21 Score=201.66 Aligned_cols=316 Identities=20% Similarity=0.217 Sum_probs=241.8
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCcceEEecchhHHHHHHHHHhc
Q 037190 32 EAMILGFQHYLVMLGTTVIIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQTSFGTRLPVVMGGSYAFNITSISIAAS 111 (526)
Q Consensus 32 ~~~~~GlQh~l~m~~~~i~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~~G~rlPiv~G~Sf~~l~~~~~i~~~ 111 (526)
.++..|+--+++-+.+.+++-+-.+++.|++++|+..|+.+..+.+|+.|+..++ .+|.|++.++|.... .+.+...
T Consensus 6 s~~~aG~va~lvg~tg~~aiv~qaa~a~g~s~~q~~SWl~al~~~~Gl~~i~lSl-~yR~Pi~~AWStPGa--AlL~~~~ 82 (378)
T PF03594_consen 6 SAVSAGFVAVLVGYTGPVAIVLQAAQAAGASPAQIASWLFALYLGMGLTSILLSL-RYRMPIVTAWSTPGA--ALLATSL 82 (378)
T ss_pred HHHHHHHHHHHhhccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCchhhcchHHH--HHHHHhc
Confidence 5788999999999999888777778889999999999999999999999999998 499999999885432 2222222
Q ss_pred cCcccCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhCchhHHHHHHHHHHHhhhhhcc---ccchhhhh
Q 037190 112 NRFNIYTDPEQRFKESMKTMQGALIMASLFNMLIGFFGFGTIFGRFLNPLAAVPLVTLTGLGLYAHGFP---QLAKCIEV 188 (526)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~g~~~~l~~~~pp~V~G~vi~lIGl~l~~~g~~---~~~~~~~v 188 (526)
.+ .+++++.|+.+++|++.+++|++|+++|++|.+|+.+...++..+ +++.+++ ...+++.+
T Consensus 83 ~~------------~~~~eavGAfl~~~~Li~l~G~tg~~~rl~~~IP~~ia~AMLAGv---Ll~f~l~~f~a~~~~P~l 147 (378)
T PF03594_consen 83 PG------------YSFAEAVGAFLVAGALILLLGVTGLFGRLMRRIPPPIASAMLAGV---LLPFGLAAFTALQADPLL 147 (378)
T ss_pred cC------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH---HHHHHHHHHHHHHhHHHH
Confidence 22 378999999999999999999999999999999988777776644 4444444 34456666
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCCCCCcccccc
Q 037190 189 GLPALIILVLLSQYLPHVMKSKRAIFDRFAILFTVAIVWGYAEILTLTGLYDNRPPSTQTSCRTDRSGLITAAPWIMVPF 268 (526)
Q Consensus 189 ~~~~l~~~i~l~~~~~~~~~~~~~~~r~~avLigivvG~~~a~~lg~~g~~~~~~~~~~~~~~~d~~~~i~~a~~~~~P~ 268 (526)
...+++..++.. ++.++++++.++++|.++++..+.. +..+ +. -++.-|
T Consensus 148 ~~~ml~~~l~~~-----------r~~pr~av~~al~~g~~~a~~~g~~----------------~~~~-~~--~~~~~p- 196 (378)
T PF03594_consen 148 VGPMLAVFLLAR-----------RFSPRYAVLAALVAGVAVAALTGQL----------------HPSA-LQ--LSLAHP- 196 (378)
T ss_pred HHHHHHHHHHHH-----------HHcchhHHHHHHHHHHHHHHhcCCC----------------Cccc-cc--ccccee-
Confidence 666665555443 3356789999999999998776532 1111 11 122223
Q ss_pred cccccCccccHHHHHHH-HHHHHHHHHHHHHHHHHHhhhcCCCCCCCcCCCcceehhhhhhhHhhhcCCCCCCccccchh
Q 037190 269 PLQWGPPLFNAGDAFAM-MAASFVAIIESTGTFIAASRYGSATPMPPCVLSRGIGWQGLGLLLDGAFGTGSGCAASVENA 347 (526)
Q Consensus 269 ~~~fg~P~f~~~~il~~-~~~~lv~~~esig~~~av~~~~~~~~~~~~~i~r~l~~dGl~~ilaglfG~~p~~t~s~~n~ 347 (526)
.|-.|+||+.+++.+ ++++++++......-.++-|..+. +.+.|+-+...|+++++.+.||+.+ .|.
T Consensus 197 --~~~~P~Fs~~a~v~lalPL~ivtmasQnlpG~aVL~a~GY----~~p~~~~~~~tGl~s~l~ApfGg~~------~nl 264 (378)
T PF03594_consen 197 --VFTTPEFSWSALVSLALPLFIVTMASQNLPGIAVLRAAGY----QPPVNPLITVTGLASLLAAPFGGHA------VNL 264 (378)
T ss_pred --EEECCcccHHHHHHHHHHHHHHHHHhcchHHHHHHHHcCC----CCCchHHHHHHHHHHHHHhhhchhh------hHH
Confidence 577899999999887 589999999777777777777664 4568999999999999999999985 466
Q ss_pred hhhhhccCCC---------ch-HHHHHHHHHHHHHHhh-HHHHHHHhCCHHHHHHH-HHHHHHHHHHhhchhc
Q 037190 348 GLLGLTRNGS---------RR-VVQISAGFMLFFSVLG-KFGAILASIPLPIVAAL-YCVLFAYVASAGLGLL 408 (526)
Q Consensus 348 g~i~~Tgv~S---------R~-~~~~~g~~lillgl~p-k~~~li~~IP~~Vlggv-li~~f~~i~~~Gi~~l 408 (526)
+.+...-|.+ || +.+.+|++.+++|++. .+..++...|.+.+..+ .+.+++.+..+=-+.+
T Consensus 265 AaitaAIc~g~eah~dp~rRy~Aav~~Gv~yll~Gl~a~~~v~l~~~lP~~li~~lAGLALlg~l~~sl~~A~ 337 (378)
T PF03594_consen 265 AAITAAICAGPEAHPDPSRRYIAAVAAGVFYLLFGLFAAALVALFAALPPALIAALAGLALLGTLGGSLQTAF 337 (378)
T ss_pred HHHHHHHHcCCccCCCcccchHHHHHHhHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6555444433 55 5799999999999995 78899999999999884 6667787765443333
No 13
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.88 E-value=3.3e-20 Score=186.48 Aligned_cols=317 Identities=21% Similarity=0.245 Sum_probs=244.2
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCcceEEecchhHHHHHHHHHhc
Q 037190 32 EAMILGFQHYLVMLGTTVIIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQTSFGTRLPVVMGGSYAFNITSISIAAS 111 (526)
Q Consensus 32 ~~~~~GlQh~l~m~~~~i~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~~G~rlPiv~G~Sf~~l~~~~~i~~~ 111 (526)
+++..|++.+++-+++.+++-+-.+++.|.+++|++.|+.+..+..|+.|+.-++. +|.|++.++|.-.. ++.+.+.
T Consensus 21 ~~l~ag~va~~vG~~~s~aii~~aa~a~gas~aq~aSwl~al~l~mGv~ti~Ls~~-yR~Pv~~aWSTPG~--all~asl 97 (402)
T COG3135 21 QTLLAGFVAVLVGYASSLAIIIQAAQAAGASPAQIASWLTALGLAMGVSTLTLSLR-YRVPVLTAWSTPGA--ALLVASL 97 (402)
T ss_pred hhhhhhhHHheeccCccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhh-hccceeeeecCccH--HHHHhcc
Confidence 78999999999999998887777778899999999999999999999999999985 99999999885442 2222222
Q ss_pred cCcccCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhCchhHHHHHHHHHHHhhhhhccc---cchhhhh
Q 037190 112 NRFNIYTDPEQRFKESMKTMQGALIMASLFNMLIGFFGFGTIFGRFLNPLAAVPLVTLTGLGLYAHGFPQ---LAKCIEV 188 (526)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~g~~~~l~~~~pp~V~G~vi~lIGl~l~~~g~~~---~~~~~~v 188 (526)
.+ .++.++.|+.+++|.+.++.|++|.++|+++.+||.+...++..| +.+.+++. ..+++.+
T Consensus 98 ~g------------~s~~eaVGAfiVt~~li~l~G~~~~l~rl~~~IP~sla~AmlAGI---LL~F~l~a~~a~~~~p~l 162 (402)
T COG3135 98 GG------------LSFAEAVGAFIVTGALIILCGLTGPLTRLMRIIPPSLAAAMLAGI---LLRFGLKAFKALPTQPLL 162 (402)
T ss_pred CC------------CCHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCChHHHHHHHHHH---HHHHHHHHHhccCCChHH
Confidence 22 378999999999999999999999999999999997776665533 55555544 4456666
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCCCCCcccccc
Q 037190 189 GLPALIILVLLSQYLPHVMKSKRAIFDRFAILFTVAIVWGYAEILTLTGLYDNRPPSTQTSCRTDRSGLITAAPWIMVPF 268 (526)
Q Consensus 189 ~~~~l~~~i~l~~~~~~~~~~~~~~~r~~avLigivvG~~~a~~lg~~g~~~~~~~~~~~~~~~d~~~~i~~a~~~~~P~ 268 (526)
.+.+++..++..++ -.+++++..+++|.+++...|.. +.. | ..+-...|
T Consensus 163 ~lpmv~~~ll~r~f-----------~pr~aV~aalvvgv~va~~~G~~---~~~----------~------~~~~~~~p- 211 (402)
T COG3135 163 VLPMVLAYLLARVF-----------APRYAVIAALVVGVLVAALLGDL---HTA----------L------VALEISTP- 211 (402)
T ss_pred HHHHHHHHHHHHHc-----------CchHHHHHHHHHHHHHHHHhCcc---ccc----------c------cccccCcc-
Confidence 66666555544333 35799999999999999888642 111 1 12223345
Q ss_pred cccccCccccHHHHHHH-HHHHHHHHHHHHHHHHHHhhhcCCCCCCCcCCCcceehhhhhhhHhhhcCCCCCCccccchh
Q 037190 269 PLQWGPPLFNAGDAFAM-MAASFVAIIESTGTFIAASRYGSATPMPPCVLSRGIGWQGLGLLLDGAFGTGSGCAASVENA 347 (526)
Q Consensus 269 ~~~fg~P~f~~~~il~~-~~~~lv~~~esig~~~av~~~~~~~~~~~~~i~r~l~~dGl~~ilaglfG~~p~~t~s~~n~ 347 (526)
.|-.|+||+.+++.+ ++++++.+...-..-.++-|..+. +++.+--+...|+.+++++.||+.. -|.
T Consensus 212 --~~v~P~Fs~~A~l~lalPL~lvtmasQN~pGiAvLka~gY----~pp~~pl~~~TGl~sll~ApfG~~t------~nL 279 (402)
T COG3135 212 --TWVTPEFSFAAMLSLALPLFLVTMASQNLPGIAVLKAAGY----QPPPSPLIVATGLASLLSAPFGGHT------VNL 279 (402)
T ss_pred --eeeCCcccHHHHHHHhHHHHHHHHHhccCccceeehhcCC----CCCCchHHHHhHHHHHHhcccccce------ecH
Confidence 577899999999887 589999999877777777777664 3456778999999999999999974 567
Q ss_pred hhhhhccCCC---------ch-HHHHHHHHHHHHHHhh-HHHHHHHhCCHHHHHHH-HHHHHHHHHHhhchhcc
Q 037190 348 GLLGLTRNGS---------RR-VVQISAGFMLFFSVLG-KFGAILASIPLPIVAAL-YCVLFAYVASAGLGLLQ 409 (526)
Q Consensus 348 g~i~~Tgv~S---------R~-~~~~~g~~lillgl~p-k~~~li~~IP~~Vlggv-li~~f~~i~~~Gi~~l~ 409 (526)
+.+...-|.+ || +..++|.+.+++|+|. .+.+++...|.+.+..+ .+.+.+.+...-..-++
T Consensus 280 aAItAAic~gpdaHpD~~rry~Aa~~agi~ylv~GlF~~~~~~l~~alP~~li~~lAGLALlg~~~~~l~~A~~ 353 (402)
T COG3135 280 AAITAAICTGPDAHPDPARRYTAALVAGIFYLLAGLFGGALVGLMAALPASLIAALAGLALLGTLGNSLQAALK 353 (402)
T ss_pred HHHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7776665555 44 5789999999999995 78999999999998874 55566666554444443
No 14
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=99.87 E-value=1.3e-19 Score=200.53 Aligned_cols=335 Identities=13% Similarity=0.136 Sum_probs=223.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCcceEEecchhHHHHHHHHH
Q 037190 30 WSEAMILGFQHYLVMLGTTVIIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQTSFGTRLPVVMGGSYAFNITSISIA 109 (526)
Q Consensus 30 ~~~~~~~GlQh~l~m~~~~i~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~~G~rlPiv~G~Sf~~l~~~~~i~ 109 (526)
+...+..|+.-.+..++-.+++..+ .|+++ ...++++.+..++.++||..--++.|+..+.-..+..+.
T Consensus 14 l~~Di~aGltv~~~~iP~~~ayA~l----aglpp-------~~GLysa~~~~iv~alfGss~~~i~Gp~a~~sl~~~~~v 82 (563)
T TIGR00815 14 FKGDLMAGLTVGILLIPQAMAYAIL----AGLSP-------IYGLYTSFVPPFIYALFGTSRDIAIGPVAVMSLLLGSVI 82 (563)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHH----cCCCc-------hhhhHHHHHHHHHhheecCCCcccCCHHHHHHHHHHHHH
Confidence 5678999998776555444444332 69998 577999999999999999888888887654432222333
Q ss_pred hccCcccCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhCchhHHHHHHHHHHHhhhhhcccc-------
Q 037190 110 ASNRFNIYTDPEQRFKESMKTMQGALIMASLFNMLIGFFGFGTIFGRFLNPLAAVPLVTLTGLGLYAHGFPQL------- 182 (526)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~g~~~~l~~~~pp~V~G~vi~lIGl~l~~~g~~~~------- 182 (526)
..++.. .+++ .+....+....+++|++++++|++|+ +++.+++|..|+..++..+|+.++..+++.+
T Consensus 83 ~~~~~~--~~~~---~~~~~~a~~l~~l~Gi~~~~~g~lrl-G~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~~G~~~~~ 156 (563)
T TIGR00815 83 ARVGLQ--YLFD---CDAIRLAFTLTLLAGIFQVILGLLRL-GFLIEFLSHAVISGFMTGAAITIGLSQLKGLLGISIFN 156 (563)
T ss_pred HHhcCC--CCcc---cHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 333211 1111 12356667889999999999999997 9999999987777788888887664333211
Q ss_pred ----------------ch----hhh---hHHHHHHHHHHHHHhhhhhhhhhhhh-hhhhHHHHHHHHHHHHHHHHHhcCC
Q 037190 183 ----------------AK----CIE---VGLPALIILVLLSQYLPHVMKSKRAI-FDRFAILFTVAIVWGYAEILTLTGL 238 (526)
Q Consensus 183 ----------------~~----~~~---v~~~~l~~~i~l~~~~~~~~~~~~~~-~r~~avLigivvG~~~a~~lg~~g~ 238 (526)
.+ +|. ++..+++++....++.|++ +++. ...+..|+.+++++++++.++...
T Consensus 157 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~---~~~~~~~~p~~li~vi~~~~~~~~~~~~~- 232 (563)
T TIGR00815 157 TRTDTLGVVISTWAGLPNTHNWNWCTLVIGLVLLLFLLYTKKLGKRN---KKLLFAPAVAPLLVVILATLAVTIGLHKK- 232 (563)
T ss_pred CCCChHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHhhhhc---cchhcccccHHHHHHHHHHHHHHHHccCC-
Confidence 00 222 2222222222222221111 1111 123577889999988777663210
Q ss_pred CCCCCCCCCCccccCCCCcCCCCCcccccccccccCccccHHHH----HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 037190 239 YDNRPPSTQTSCRTDRSGLITAAPWIMVPFPLQWGPPLFNAGDA----FAMMAASFVAIIESTGTFIAASRYGSATPMPP 314 (526)
Q Consensus 239 ~~~~~~~~~~~~~~d~~~~i~~a~~~~~P~~~~fg~P~f~~~~i----l~~~~~~lv~~~esig~~~av~~~~~~~~~~~ 314 (526)
++ +...+.+.. .+| .+..|.+||..+ ...+.++++.++|++...++.++..++ +
T Consensus 233 ~~-----------~~~~g~ip~----g~p---~~~~~~~~~~~~~~l~~~a~~ia~v~~~e~l~~a~~~~~~~~~----~ 290 (563)
T TIGR00815 233 QG-----------VSILGHIPS----GLS---FFPPITLDWELLPTLAPDAIAIAIVGLIESIAIARSFARMTGY----K 290 (563)
T ss_pred CC-----------eEEEeecCC----CCC---CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----C
Confidence 00 111111111 123 234566676544 345689999999999999999887653 4
Q ss_pred cCCCcceehhhhhhhHhhhcCCCCCCccccchhhhhhhccCCCchHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHH
Q 037190 315 CVLSRGIGWQGLGLLLDGAFGTGSGCAASVENAGLLGLTRNGSRRVVQISAGFMLFFSVLGKFGAILASIPLPIVAALYC 394 (526)
Q Consensus 315 ~~i~r~l~~dGl~~ilaglfG~~p~~t~s~~n~g~i~~Tgv~SR~~~~~~g~~lillgl~pk~~~li~~IP~~Vlggvli 394 (526)
.+.||++.++|++|+++|+||++|.+.++ .+..+...+|+++|.+.++++++++++.++ +..++..+|.++++++++
T Consensus 291 ~d~n~El~a~G~~N~~~~~fg~~p~~~s~-srs~~~~~~G~~t~~a~i~~~~~~l~~~l~--~~~~l~~iP~~~la~ili 367 (563)
T TIGR00815 291 IDANQELVAQGIANIVGSFFSCYPATGSL-SRTAVNAKAGCRTQLSGVVTAIVVLLVLLV--LTPLFYYIPQAALAAIII 367 (563)
T ss_pred CCCcHHHHHhhHHHHHHHHhCccCCCCcc-hHHHHHHhcCCcchHHHHHHHHHHHHHHHH--HHHHHHhChHHHHHHHHH
Confidence 67899999999999999999999998877 667777889999999999999888887666 678999999999999988
Q ss_pred H-HHHHHHHhhchhccc
Q 037190 395 V-LFAYVASAGLGLLQF 410 (526)
Q Consensus 395 ~-~f~~i~~~Gi~~l~~ 410 (526)
+ .+.++....++.+.+
T Consensus 368 ~~~~~l~~~~~~~~~~~ 384 (563)
T TIGR00815 368 SAVRGLIDYKELYKLWK 384 (563)
T ss_pred HHHhcccCHHHHHHHHc
Confidence 6 444433433443333
No 15
>PRK11660 putative transporter; Provisional
Probab=99.85 E-value=7.3e-19 Score=194.77 Aligned_cols=326 Identities=16% Similarity=0.181 Sum_probs=214.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHhhHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCcceEEecchhHHHHHHHH
Q 037190 29 PWSEAMILGFQHYLVMLGTTVIIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQTSFGTRLPVVMGGSYAFNITSISI 108 (526)
Q Consensus 29 p~~~~~~~GlQh~l~m~~~~i~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~~G~rlPiv~G~Sf~~l~~~~~i 108 (526)
.+...+.+|+.-.+..++-.+++..+ .|+++ +..++.+-+++++.+++|..--++.||..........+
T Consensus 28 ~l~~D~iAGltv~~~~iPq~mayA~l----ag~pp-------~~GLysa~~~~~vyal~Gss~~~~~Gp~a~~~~~~~~~ 96 (568)
T PRK11660 28 RFTRDLIAGITVGIIAIPLAMALAIA----SGVPP-------QYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVILYPV 96 (568)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH----cCCCh-------HHHHHHHHHHHHHHHHhcCCCCcccChhHHHHHHHHHH
Confidence 36788999999876665555544433 78998 56899999999999999888888889876542222222
Q ss_pred HhccCcccCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhCchhHHHHHHHHHHHhhhhhcccc-c----
Q 037190 109 AASNRFNIYTDPEQRFKESMKTMQGALIMASLFNMLIGFFGFGTIFGRFLNPLAAVPLVTLTGLGLYAHGFPQL-A---- 183 (526)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~g~~~~l~~~~pp~V~G~vi~lIGl~l~~~g~~~~-~---- 183 (526)
..+ .+++.+..+.+++|++++++|++|+ +++.+++|..|...++..+|+.++..+++.. |
T Consensus 97 ~~~--------------~~~~~~~~~~~l~Gii~~l~gllrl-G~l~~fip~pVi~Gf~~g~al~I~~~Ql~~~lG~~~~ 161 (568)
T PRK11660 97 SQQ--------------FGLAGLLVATLMSGIILILMGLARL-GRLIEYIPLSVTLGFTSGIGIVIATLQIKDFFGLQMA 161 (568)
T ss_pred HHH--------------hhHHHHHHHHHHHHHHHHHHHHHhh-hHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 222 2456677789999999999999997 9999999977766688888886554433221 0
Q ss_pred -------------------hhh---hhHHHHHHHHHHHHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhcCCCCC
Q 037190 184 -------------------KCI---EVGLPALIILVLLSQYLPHVMKSKRAIFDRFAILFTVAIVWGYAEILTLTGLYDN 241 (526)
Q Consensus 184 -------------------~~~---~v~~~~l~~~i~l~~~~~~~~~~~~~~~r~~avLigivvG~~~a~~lg~~g~~~~ 241 (526)
.+| .+++.++++++++.++ ..|.+..++++++++++++.++..+ .+.
T Consensus 162 ~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~l~lll~~~~~----------~~~iP~~li~iiv~t~~~~~~~~~~-~~v 230 (568)
T PRK11660 162 HVPEHYLEKVGALFQALPTINWGDALIGIVTLGVLILWPRL----------KIRLPGHLPALLAGTAVMGVLNLLG-GHV 230 (568)
T ss_pred CCCccHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHhh----------cccCchHHHHHHHHHHHHHHHhccC-CCc
Confidence 011 2344444444332221 1235667889999999988876421 000
Q ss_pred CCCCCCCcccc-CCC--CcCC-CCCcccccccccccCc-------cccHHHH----HHHHHHHHHHHHHHHHHHHHHhhh
Q 037190 242 RPPSTQTSCRT-DRS--GLIT-AAPWIMVPFPLQWGPP-------LFNAGDA----FAMMAASFVAIIESTGTFIAASRY 306 (526)
Q Consensus 242 ~~~~~~~~~~~-d~~--~~i~-~a~~~~~P~~~~fg~P-------~f~~~~i----l~~~~~~lv~~~esig~~~av~~~ 306 (526)
+.......... |-. ..+. ..|-+.+| |..| .+||+.+ ...+.++++..+|++....+.++.
T Consensus 231 ~~vg~~~~~~~~~g~~~~~ip~~~p~~~~p----~~~~~~~~~~~~~~~~~~~~ll~~a~~iaiv~~iesl~~~~~~~~~ 306 (568)
T PRK11660 231 ATIGSRFHYVLADGSQGNGIPPLLPQFVLP----WNLPGADGQPFTLSWDLIRALLPAAFSMAMLGAIESLLCAVVLDGM 306 (568)
T ss_pred eeecccccccccccccccCCCCCCCCCCCC----ccccccccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00000000000 000 0000 01112222 1111 2465544 345678899999999888888877
Q ss_pred cCCCCCCCcCCCcceehhhhhhhHhhhcCCCCCCccccchhhhhhhccCCCchHHHHHHHHHHHHHHhhHHHHHHHhCCH
Q 037190 307 GSATPMPPCVLSRGIGWQGLGLLLDGAFGTGSGCAASVENAGLLGLTRNGSRRVVQISAGFMLFFSVLGKFGAILASIPL 386 (526)
Q Consensus 307 ~~~~~~~~~~i~r~l~~dGl~~ilaglfG~~p~~t~s~~n~g~i~~Tgv~SR~~~~~~g~~lillgl~pk~~~li~~IP~ 386 (526)
.++ +.+.||++.++|++|+++|+||++|.+++. ....+...+|.++|.+.++.++++++.-++ +++++..||.
T Consensus 307 ~~~----~~d~n~EL~a~G~aNi~~~~fgg~p~~~s~-srSa~n~~aGarT~la~iv~a~~~ll~ll~--l~~ll~~iP~ 379 (568)
T PRK11660 307 TGT----KHSANSELVGQGLGNIVAPFFGGITATAAI-ARSAANVRAGATSPISAVIHALLVLLALLV--LAPLLSYLPL 379 (568)
T ss_pred cCC----CCCCcHHHHHHhHHHHHHHHhCcccccchH-HHHHHHHhcCCCcHHHHHHHHHHHHHHHHH--HHHHHHhCcH
Confidence 653 457899999999999999999999998876 566777789999999998888777655433 5679999999
Q ss_pred HHHHHHHHH-HHHHHHH
Q 037190 387 PIVAALYCV-LFAYVAS 402 (526)
Q Consensus 387 ~Vlggvli~-~f~~i~~ 402 (526)
+++++++++ .+.++..
T Consensus 380 ~vLa~ili~~~~~m~~~ 396 (568)
T PRK11660 380 SAMAALLLMVAWNMSEA 396 (568)
T ss_pred HHHHHHHHHHHHHhhhH
Confidence 999999886 4444433
No 16
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.63 E-value=1.2e-15 Score=154.45 Aligned_cols=240 Identities=20% Similarity=0.189 Sum_probs=159.6
Q ss_pred HhhhhhHHHHHHhhCchhHHHHHHHHHHHhhhhhcccc-c----------------------h--hh---hhHHHHHHHH
Q 037190 145 IGFFGFGTIFGRFLNPLAAVPLVTLTGLGLYAHGFPQL-A----------------------K--CI---EVGLPALIIL 196 (526)
Q Consensus 145 lg~~g~~~~l~~~~pp~V~G~vi~lIGl~l~~~g~~~~-~----------------------~--~~---~v~~~~l~~~ 196 (526)
+|++|+ +++.+++|..|+..++..+|+.++..+++.+ + + +| .++..+++.+
T Consensus 1 lGllrl-G~l~~~ip~pVi~Gf~~g~ai~I~~~Ql~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 79 (280)
T PF00916_consen 1 LGLLRL-GFLVRFIPRPVISGFLAGIAILIIFSQLPNLLGIPVVPSHEGLFSFIRALFQLISTITNWPTLAIGLVALVFL 79 (280)
T ss_pred Cccccc-cHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchhhhhhhhhhhccchhhhhhhhHHHHHH
Confidence 467886 9999999987777788999987765544321 0 0 11 1122222222
Q ss_pred HHHHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcC-CCCCcccccccccccCc
Q 037190 197 VLLSQYLPHVMKSKRAIFDRFAILFTVAIVWGYAEILTLTGLYDNRPPSTQTSCRTDRSGLI-TAAPWIMVPFPLQWGPP 275 (526)
Q Consensus 197 i~l~~~~~~~~~~~~~~~r~~avLigivvG~~~a~~lg~~g~~~~~~~~~~~~~~~d~~~~i-~~a~~~~~P~~~~fg~P 275 (526)
. +.++.++. .+++...+.+..++.+++++++++.+.... . .++..+.+ ...|.+.+|. .
T Consensus 80 ~-~~~~~~~~-~~~~~~~~~p~~li~vv~~~~~~~~~~~~~-~-----------~v~~~~~i~~~lp~~~~p~------~ 139 (280)
T PF00916_consen 80 L-IIRLLPKR-LPSRFWPPIPAPLIVVVLGTLLSWLFLLDK-Y-----------GVAIVGEIPSGLPPPSLPS------F 139 (280)
T ss_pred h-hhhhhhhh-ccccccccccccceeeehhhhhhhhhhhcc-c-----------cccccccccccCccccCcc------c
Confidence 2 22222210 011222345577888888888887764311 0 01111111 1223333332 0
Q ss_pred cccHHH----HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcCCCcceehhhhhhhHhhhcCCCCCCccccchhhhhh
Q 037190 276 LFNAGD----AFAMMAASFVAIIESTGTFIAASRYGSATPMPPCVLSRGIGWQGLGLLLDGAFGTGSGCAASVENAGLLG 351 (526)
Q Consensus 276 ~f~~~~----il~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~i~r~l~~dGl~~ilaglfG~~p~~t~s~~n~g~i~ 351 (526)
.+|++. +...+.++++..+|++.+.+++++..++ +.+.|||+.++|++|+++|+||++|.+.++ .+..+..
T Consensus 140 ~~~~~~~~~~~~~a~~ia~v~~~~s~~~~~~~~~~~~~----~~d~n~El~a~G~aNi~s~~~gg~p~~~s~-srs~~~~ 214 (280)
T PF00916_consen 140 DISWSLILDLLPTALAIAIVGFIESLLIAKSIAKKTGY----RIDPNQELIALGLANIVSGLFGGMPGSGSF-SRSAVNY 214 (280)
T ss_pred ccccccccccchhHHHHHHHHHHHHHHhhhhhcccccc----cCCcHHHHHHhhhccccchhhccccccccc-ccchHHH
Confidence 344433 4455789999999999998888876653 457899999999999999999999998887 6777778
Q ss_pred hccCCCchHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHH-HHHHHHHhhchhccccc
Q 037190 352 LTRNGSRRVVQISAGFMLFFSVLGKFGAILASIPLPIVAALYCV-LFAYVASAGLGLLQFCN 412 (526)
Q Consensus 352 ~Tgv~SR~~~~~~g~~lillgl~pk~~~li~~IP~~Vlggvli~-~f~~i~~~Gi~~l~~~~ 412 (526)
.+|.+||.+.++++++++++-++ +..++..||.+++++++++ .+.++....++.+.|.+
T Consensus 215 ~~Ga~t~~s~~~~~~~~l~~l~~--~~~~l~~iP~~~La~ili~~~~~l~~~~~~~~~~~~~ 274 (280)
T PF00916_consen 215 RAGARTRLSGLISALFVLLVLLF--LAPLLAYIPKAVLAAILIVVGISLIDWSSLRRLWRVS 274 (280)
T ss_pred hcCcceeehhHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHhcCC
Confidence 89999999999988888776554 5679999999999998885 66777777777666553
No 17
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism]
Probab=99.58 E-value=4.8e-13 Score=150.14 Aligned_cols=325 Identities=17% Similarity=0.163 Sum_probs=211.3
Q ss_pred HHhhHHHHHhhh--cCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCcceEEecchhHHHHHHHHHhccCcccCCCcch--
Q 037190 47 TTVIIPTTLVPL--MGGGNVEKAQVINTSLFVAGINTLLQTSFGTRLPVVMGGSYAFNITSISIAASNRFNIYTDPEQ-- 122 (526)
Q Consensus 47 ~~i~~Plii~~a--~gl~~~~~~~li~~~l~~sGi~Tllq~~~G~rlPiv~G~Sf~~l~~~~~i~~~~~~~~~~~~~~-- 122 (526)
+++.+|--++.+ +|+++ .-.++.+-++.++..+||+--.+-.|+- +.+..+..-+.+.. .+++.
T Consensus 91 g~l~VPQ~iaYa~la~lpp-------iyGLYssf~~~~iY~~fGtsr~isiG~~-av~sLmv~~~v~~~----v~~~~~~ 158 (665)
T KOG0236|consen 91 GSLSVPQGLAYALLAGLPP-------IYGLYSSFFPPLIYAIFGTSRHVSIGPF-AVVSLMVGTVVSQV----VLSEAPS 158 (665)
T ss_pred eeeecchHHHHHHHcCCCh-------HHHHHHHHHHHHHheeccCCCcccccHH-HHHHHHHHHHHHHH----HhccCCC
Confidence 345567766655 68888 5789999999999999999888877763 22221211000000 00100
Q ss_pred -hhhhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhCchhHHHHHHHHHHHhhhhhccc------cc------------
Q 037190 123 -RFKESMKTMQGALIMASLFNMLIGFFGFGTIFGRFLNPLAAVPLVTLTGLGLYAHGFPQ------LA------------ 183 (526)
Q Consensus 123 -~~~~~~~~~~ga~lvaGli~~llg~~g~~~~l~~~~pp~V~G~vi~lIGl~l~~~g~~~------~~------------ 183 (526)
.....++.+...++++|++|+++|++|+ +.+.+++|..++.+++...++.+.-.+++. +.
T Consensus 159 ~~~~~~i~va~~lt~l~Giiq~~mG~lrL-Gfl~~~lS~~~l~GFt~gaa~~I~~sQlk~llGi~~~~~~~~~~~~~~~~ 237 (665)
T KOG0236|consen 159 NDIATTIQVATTLTFLTGIIQLILGLLRL-GFLVRFLSEPALSGFTTGAALHIVTSQLKVLLGITSFPRHSGPGSIVFIV 237 (665)
T ss_pred cCcchhHHHHHHHHHHHHHHHHHHHHHhc-ChHHHHccHHHHhHhhhhhhhhhhHHhhHhhccccccCCCCCceeEEEee
Confidence 1124678888899999999999999997 999999996544445566666554433322 11
Q ss_pred -----h------hhhhHHHHHHHHHHHHH-hhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCccc
Q 037190 184 -----K------CIEVGLPALIILVLLSQ-YLPHVMKSKRAIFDRFAILFTVAIVWGYAEILTLTGLYDNRPPSTQTSCR 251 (526)
Q Consensus 184 -----~------~~~v~~~~l~~~i~l~~-~~~~~~~~~~~~~r~~avLigivvG~~~a~~lg~~g~~~~~~~~~~~~~~ 251 (526)
+ .+.+++..+++++ +.+ +.++.. ++-++.....-++.+++++++++.+...+.+... .
T Consensus 238 ~~~~~~~~~~~~~~~~~l~~l~~L~-~~k~~~~~~~-~k~~~v~~~~~li~vIi~T~~~~~~~~~~~~~~~--------~ 307 (665)
T KOG0236|consen 238 FDLLANLPKTLATLVLSLIFLVVLL-LTKELNPKFK-KKLFSVPIPFELIVVIIGTLISYIFRLEGRYGPI--------I 307 (665)
T ss_pred HHhhhcccccchhhhhHHHHHHHHH-HHHHhhhhhc-ccceeecccHHHHHHHHHHHHHHHhccccccCCe--------e
Confidence 0 1233333333333 333 222210 1111133446799999999999988654211000 1
Q ss_pred cCCCCcCCCCCcccccccccccCcccc--HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcCCCcceehhhhhhh
Q 037190 252 TDRSGLITAAPWIMVPFPLQWGPPLFN--AGDAFAMMAASFVAIIESTGTFIAASRYGSATPMPPCVLSRGIGWQGLGLL 329 (526)
Q Consensus 252 ~d~~~~i~~a~~~~~P~~~~fg~P~f~--~~~il~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~i~r~l~~dGl~~i 329 (526)
++ ......|.. ..|.++ ...+...+.++++++.|+++-.++.++..+. +-+.||++.+-|++|+
T Consensus 308 ~~--~i~~g~~~~--------~lp~~~~~~~~~~~~~~i~iva~~~~iai~k~fa~~~~y----~vd~nqELiAlG~~Ni 373 (665)
T KOG0236|consen 308 VG--EIPRGFPPP--------SLPPLSLTPQVIPDAFAIAIVALLEHIAIGKSFASLHGY----KVDSNQELIALGISNI 373 (665)
T ss_pred ec--cCCCCCCCC--------CCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----eeCCChHHHHHHHHHH
Confidence 11 000112222 334333 3446668899999999999888888877553 4568999999999999
Q ss_pred HhhhcCCCCCCccccchhhhhhhccCCCchHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHH-HHH-HHHHhhchh
Q 037190 330 LDGAFGTGSGCAASVENAGLLGLTRNGSRRVVQISAGFMLFFSVLGKFGAILASIPLPIVAALYCV-LFA-YVASAGLGL 407 (526)
Q Consensus 330 laglfG~~p~~t~s~~n~g~i~~Tgv~SR~~~~~~g~~lillgl~pk~~~li~~IP~~Vlggvli~-~f~-~i~~~Gi~~ 407 (526)
++++|++.|.+.++ .+..+...+|+.++.+.++.++..++.-++ +++++..||.++++++.+. +.+ .+-...++.
T Consensus 374 ~sSff~~~p~tgs~-sRSav~~~sG~~T~~s~i~~~~~vl~~l~~--l~p~f~~iP~~vLaaIIi~a~~~~l~~~~~~~~ 450 (665)
T KOG0236|consen 374 LSSFFGCYPTTGSF-SRSAVNIKSGGRTQVAGIVSAALVLLALLF--LGPLFYYIPKCVLAAIIISALIGMLIQLEDLKP 450 (665)
T ss_pred hhhhhceEcccchh-hHHHHHhhcCCcchHHHHHHHHHHHHHHHH--HHHHhhhhhHHHHHHHHHHHhhHHHhhhhhhhh
Confidence 99999999999888 899999999999999987766665554443 6789999999999998775 555 555555555
Q ss_pred cccc
Q 037190 408 LQFC 411 (526)
Q Consensus 408 l~~~ 411 (526)
+.+.
T Consensus 451 lwr~ 454 (665)
T KOG0236|consen 451 LWRL 454 (665)
T ss_pred heeC
Confidence 5544
No 18
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=98.60 E-value=9e-05 Score=85.25 Aligned_cols=315 Identities=16% Similarity=0.173 Sum_probs=170.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcceEEecchhH---HHHHHHHHhccCcccCCCcchhhhhhHHHHHHHHHHHHHHHHHHh
Q 037190 70 INTSLFVAGINTLLQTSFGTRLPVVMGGSYAF---NITSISIAASNRFNIYTDPEQRFKESMKTMQGALIMASLFNMLIG 146 (526)
Q Consensus 70 i~~~l~~sGi~Tllq~~~G~rlPiv~G~Sf~~---l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg 146 (526)
++=+++.++++.+++++++..--++.|.+.-. .-.+..+...++. + | ++...=..+.++++.++++
T Consensus 403 v~E~Llstai~Giifslf~GQPL~IlG~TGPilvF~~~ly~~c~~~~~-----~---y---l~~~~WigiW~~~~~~lla 471 (900)
T TIGR00834 403 VSELLISTAVQGVLFALLAAQPLLVVGFSGPLLVFEEAFFSFCESNGL-----E---Y---LVGRVWIGLWLVLLVLLLV 471 (900)
T ss_pred HHHHHHHHHHHHHHHhhhcCCceEEecCcccHHHHHHHHHHHHhhcCC-----c---h---HHHHHHHHHHHHHHHHHHH
Confidence 45688999999999999966666666755322 2222222322221 1 1 1122223567888888888
Q ss_pred hhhhHHHHHHhhCchhHHHHHHHHHHHhhhhhccccc-------------------------------------------
Q 037190 147 FFGFGTIFGRFLNPLAAVPLVTLTGLGLYAHGFPQLA------------------------------------------- 183 (526)
Q Consensus 147 ~~g~~~~l~~~~pp~V~G~vi~lIGl~l~~~g~~~~~------------------------------------------- 183 (526)
.+.. ..++|+++...-=.+-++|++..+-.+++.+-
T Consensus 472 ~~~~-s~lvryiTRFTeEiFa~lIs~IFI~eai~~L~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (900)
T TIGR00834 472 ATEG-SFLVRYISRFTQEIFSFLISLIFIYETFSKLIKIFQEHPLQVFYNTLFCVPPKPQGPSVSALLEKDCSKLGGTLG 550 (900)
T ss_pred HHhH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccccccccccccccccccccccccccccc
Confidence 8876 77888888755555555666544433332110
Q ss_pred --hh---hhhHHHHH---HHHHHHHHhhhhhhh------hhhhhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCc
Q 037190 184 --KC---IEVGLPAL---IILVLLSQYLPHVMK------SKRAIFDRFAILFTVAIVWGYAEILTLTGLYDNRPPSTQTS 249 (526)
Q Consensus 184 --~~---~~v~~~~l---~~~i~l~~~~~~~~~------~~~~~~r~~avLigivvG~~~a~~lg~~g~~~~~~~~~~~~ 249 (526)
+| ...++..+ +.++.+..+++++.. +.|+.+.=+++.+++++-+.+.+.++.. ....-+.+
T Consensus 551 ~~~c~~~~~~~llsliL~lgTf~~a~~L~~fk~s~yf~~~vR~~isDfgv~iaI~~~t~v~~~~~~v--~~~kl~Vp--- 625 (900)
T TIGR00834 551 GNNCRFQPNTALLSLVLMLGTFFLAMFLRKFKNSRYFPGKARRLIGDFGVPISILIMVLVDIFIGDT--YTQKLSVP--- 625 (900)
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHHhCCCCcCCchhhhhhhhhhHHHHHHHHHHHHHHhccC--cccccCCC---
Confidence 00 12233322 223444555554321 1234455578999999998888876521 10000000
Q ss_pred cccCCCCcC-CCCCcccccccccccCcccc-HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcCCCcceehhhhh
Q 037190 250 CRTDRSGLI-TAAPWIMVPFPLQWGPPLFN-AGDAFAMMAASFVAIIESTGTFIAASRYGSATPMPPCVLSRGIGWQGLG 327 (526)
Q Consensus 250 ~~~d~~~~i-~~a~~~~~P~~~~fg~P~f~-~~~il~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~i~r~l~~dGl~ 327 (526)
-.|...- ..-.|+--|.-.....|.+. +.++++.+.+++.-++|+--+..-+++- .++-++....+=.+..-|+-
T Consensus 626 --~~f~pt~p~~R~W~i~p~~~~~~~p~w~~~~A~iPAlll~ILiFmD~nIts~iv~~~-e~kLkKgsgyH~Dllllg~~ 702 (900)
T TIGR00834 626 --SGLKVTNPSARGWFIPPLGENRPFPWWMMFAAALPALLVFILIFMEQQITTLIVSKK-ERKLKKGSGFHLDLLLVVGM 702 (900)
T ss_pred --CCcCCCCCCCCCeEEccccccccccHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCc-cccCCCCcccchHHHHHHHH
Confidence 0111100 01355532210000113332 5667777888888899886443333332 11222334455567888999
Q ss_pred hhHhhhcCCCCCCccccchhhhhh-h---------------ccCCC-chHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHH
Q 037190 328 LLLDGAFGTGSGCAASVENAGLLG-L---------------TRNGS-RRVVQISAGFMLFFSVLGKFGAILASIPLPIVA 390 (526)
Q Consensus 328 ~ilaglfG~~p~~t~s~~n~g~i~-~---------------Tgv~S-R~~~~~~g~~lillgl~pk~~~li~~IP~~Vlg 390 (526)
+.++|++|-.+.++...++.--+. + .+|.. |...+..++ |+.++++ ..+++..||.+|+.
T Consensus 703 ~~v~sllGLPw~~aatv~S~~Hv~sL~v~~~~~~~Ge~~~i~~V~EQRvT~ll~~l-Liglsv~--~~PvL~~IP~aVL~ 779 (900)
T TIGR00834 703 GGVAALFGLPWLSAATVRSVTHANALTVMSKASAPGEKAQIQEVREQRVTGLLVAV-LVGLSIL--MEPILKRIPLAVLF 779 (900)
T ss_pred HHHHHhcCCCcccccCCcChhhHhHHeeeeeccCCCCCCccceeEeeehHHHHHHH-HHHHHHH--HHHHHhhccHHHHH
Confidence 999999998877665434332221 1 12333 445555554 3333332 55689999999999
Q ss_pred HHHHHHHHHHHHhhchhc
Q 037190 391 ALYCVLFAYVASAGLGLL 408 (526)
Q Consensus 391 gvli~~f~~i~~~Gi~~l 408 (526)
|++++ .|.-...|.+..
T Consensus 780 GvFlY-MGv~SL~GnQ~~ 796 (900)
T TIGR00834 780 GIFLY-MGVTSLSGIQLF 796 (900)
T ss_pred HHHHH-HHHhhcccCHHH
Confidence 99998 344444555544
No 19
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism]
Probab=98.45 E-value=0.00027 Score=79.78 Aligned_cols=329 Identities=11% Similarity=0.103 Sum_probs=182.8
Q ss_pred HHHHHHHHHHhhHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCcceEEecchhH---HHHHHHHHhccCcc
Q 037190 39 QHYLVMLGTTVIIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQTSFGTRLPVVMGGSYAF---NITSISIAASNRFN 115 (526)
Q Consensus 39 Qh~l~m~~~~i~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~~G~rlPiv~G~Sf~~---l~~~~~i~~~~~~~ 115 (526)
--++.++.+++.+.+..++-++=. .+-..=++=+++...++.++.+++|..-.++.|++.-. --.+..+...++..
T Consensus 364 a~~lfiYfa~l~P~ItFG~ll~~~-Tdg~~~v~E~L~stal~GiifslfggQPLlIlg~TgP~lVfe~~lf~f~~~~~~d 442 (876)
T KOG1172|consen 364 AATLFIYFACLLPAITFGGLLGEA-TDGLIGVVETLLSTALCGIIFSLFGGQPLLILGVTGPLLVFEKALFKFCKDNGLD 442 (876)
T ss_pred hHHHHHHHHhhhhHhhHHHHhhhh-ccchHHHHHHHHHHHHHHHHHHHhcCCceEEEecCccHHHHHHHHHHHHhhCCCc
Confidence 455666666665555555433322 12334456789999999999999988777788865322 22222333333210
Q ss_pred cCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhCchhHHHHHHHHHHHhhhhhccc--------------
Q 037190 116 IYTDPEQRFKESMKTMQGALIMASLFNMLIGFFGFGTIFGRFLNPLAAVPLVTLTGLGLYAHGFPQ-------------- 181 (526)
Q Consensus 116 ~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~g~~~~l~~~~pp~V~G~vi~lIGl~l~~~g~~~-------------- 181 (526)
=+....=..+...++.++++.+.. ..+.++|+...-=.+-++|.+..+..+++.
T Consensus 443 -----------yl~~r~wVglW~~~l~illaa~~a-s~lv~~~TRfteEiF~~LIs~iFi~eai~kl~~i~~~~~~~~~~ 510 (876)
T KOG1172|consen 443 -----------YLAFRAWVGLWTAFLLILLAATNA-SSLVKYITRFTEEIFGLLISLIFIYEAIKKLIKIFKGLPIEFDS 510 (876)
T ss_pred -----------hhhHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccc
Confidence 122223335777888888888876 778888886433333344444333333220
Q ss_pred -----------cc--------------hhhhhHHHHHHHHHHHHHhhhhhhh------hhhhhhhhhHHHHHHHHHHHHH
Q 037190 182 -----------LA--------------KCIEVGLPALIILVLLSQYLPHVMK------SKRAIFDRFAILFTVAIVWGYA 230 (526)
Q Consensus 182 -----------~~--------------~~~~v~~~~l~~~i~l~~~~~~~~~------~~~~~~r~~avLigivvG~~~a 230 (526)
.. ++..++++..+.++.+..++|+++. +.|.+..=+++.+++++-+.+.
T Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~llslil~~gt~~~a~~lr~fr~s~yf~~~~R~~isDfgvpisIl~~s~i~ 590 (876)
T KOG1172|consen 511 KPNPGADWSGPECESVSGTLLGSSCRPDTALLSLILMFGTLFLALTLRKFKSSRYFPRKVRSLISDFGVPLSILVFSLID 590 (876)
T ss_pred cCCcccccccccccccCcccCCCcCCcchHHHHHHHHHHHHHHHHHHHHhccCCccchHHHHHHHhhhhHHHHHHHHHHH
Confidence 00 1122333333445556666665532 2244455578999999998888
Q ss_pred HHHHhcCCCCCCCCCCCCccccC-CCCcCCC-CCcccccccccccCcccc-HHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 037190 231 EILTLTGLYDNRPPSTQTSCRTD-RSGLITA-APWIMVPFPLQWGPPLFN-AGDAFAMMAASFVAIIESTGTFIAASRYG 307 (526)
Q Consensus 231 ~~lg~~g~~~~~~~~~~~~~~~d-~~~~i~~-a~~~~~P~~~~fg~P~f~-~~~il~~~~~~lv~~~esig~~~av~~~~ 307 (526)
+..+.. .+.. ..+-. +...-.. -.|+-.|.. ..|.+. +.++++.+.+++.-++|+--+..-+++.
T Consensus 591 ~~~~~~--~~~k------l~vp~~~~~t~~~~rgw~v~~~~---~~P~~~~~~A~ipalll~iLiFmDqqIts~iv~rk- 658 (876)
T KOG1172|consen 591 YFGGSV--ETPK------LPVPSVFPPTWPFDRGWFVPPFG---KNPWWYVFAALIPALLLTILIFMDQQITAVIVNRK- 658 (876)
T ss_pred hhcccc--CCCc------cccCcCCCCCCcccCCeeeCCCC---CCCHHHHHHHHHHHHHHHHHHHhcchHHHHHhhcc-
Confidence 877521 1111 00001 1110011 245544310 122222 3556666778888888875433323322
Q ss_pred CCCCCCCcCCCcceehhhhhhhHhhhcCCCCCCccccchhhhhhhcc----------------CCC-chHHHHHHHHHHH
Q 037190 308 SATPMPPCVLSRGIGWQGLGLLLDGAFGTGSGCAASVENAGLLGLTR----------------NGS-RRVVQISAGFMLF 370 (526)
Q Consensus 308 ~~~~~~~~~i~r~l~~dGl~~ilaglfG~~p~~t~s~~n~g~i~~Tg----------------v~S-R~~~~~~g~~lil 370 (526)
+++-.+....+=.+..-|+-+.++|++|=.+.++...++..-+..=. |.. |......+++..
T Consensus 659 e~kLKKgsgyH~DLlllgil~~icsllGLPw~~~a~p~S~~H~~SL~v~~~~~apge~~~i~~V~EQRvtgll~~llvg- 737 (876)
T KOG1172|consen 659 ENKLKKGSGYHLDLLLLGILTLICSLLGLPWSNAATVQSPMHTKSLAVESETSAPGEQPQIVGVREQRVTGLLQFLLVG- 737 (876)
T ss_pred cccCCCCcchhHHHHHHHHHHHHHHhcCCCccccccccCHHHHHHHHHhhcccCCCCccccccchhhhhHHHHHHHHHH-
Confidence 11222333445568889999999999999888777666665444322 222 334455554443
Q ss_pred HHHhhHHHHHHHhCCHHHHHHHHHH
Q 037190 371 FSVLGKFGAILASIPLPIVAALYCV 395 (526)
Q Consensus 371 lgl~pk~~~li~~IP~~Vlggvli~ 395 (526)
+. -...+++..||.||+.|+.++
T Consensus 738 ls--~~~~pvL~~IP~~VL~GvFlY 760 (876)
T KOG1172|consen 738 LS--VLLLPVLKLIPMPVLYGVFLY 760 (876)
T ss_pred HH--HHHHHHHhhccHHHHHHHHHH
Confidence 22 235678999999999999887
No 20
>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 489 to 517 amino acids in length.
Probab=97.84 E-value=0.0042 Score=64.19 Aligned_cols=344 Identities=14% Similarity=0.121 Sum_probs=179.2
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHhhhcCCChHHHH------HHHHHHHHHHHHHHHHHHHhcCCcceEE
Q 037190 22 FCVSSSPPWSEAMILGFQHYLVMLGTTVIIPTTLVPLMGGGNVEKA------QVINTSLFVAGINTLLQTSFGTRLPVVM 95 (526)
Q Consensus 22 y~~~~~pp~~~~~~~GlQh~l~m~~~~i~~Plii~~a~gl~~~~~~------~li~~~l~~sGi~Tllq~~~G~rlPiv~ 95 (526)
|+.||-.|.. +|.---.+|+++ +....++.+|++++-.. .+|.+.+|+.=+++++.- ..+++=-.
T Consensus 57 fE~ED~vPAl----AgtIGkivMvsA---v~aafA~~lgL~~~Fv~envR~EllI~a~lFvil~Sgfl~P--~anLAGth 127 (492)
T PF11840_consen 57 FEWEDLVPAL----AGTIGKIVMVSA---VAAAFAAPLGLSPEFVIENVRYELLIAALLFVILFSGFLNP--RANLAGTH 127 (492)
T ss_pred cchHHhhHHH----HhhhhHHHHHHH---HHHHHhhccCCChhHhhhhhhhhhhHHHHHHHHHHHhccCc--cccccCCC
Confidence 4445555532 333334455543 22234445788875322 345555555555555543 24444444
Q ss_pred ecchhHHHHHHHHHhccCcccCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhCchhHHHHHHHHHHHhh
Q 037190 96 GGSYAFNITSISIAASNRFNIYTDPEQRFKESMKTMQGALIMASLFNMLIGFFGFGTIFGRFLNPLAAVPLVTLTGLGLY 175 (526)
Q Consensus 96 G~Sf~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~g~~~~l~~~~pp~V~G~vi~lIGl~l~ 175 (526)
||--..+|. +++. | +.+.++| ++-|++-++++++|--+|+.++-..-|.|..+.-+|+.=.
T Consensus 128 gPmIpLIp~---ivaa-G-------------gHPLalg--ilvg~fGlil~~~kggS~L~~LTs~gv~ggLllylG~~G~ 188 (492)
T PF11840_consen 128 GPMIPLIPL---IVAA-G-------------GHPLALG--ILVGVFGLILSIFKGGSKLVNLTSHGVCGGLLLYLGFVGL 188 (492)
T ss_pred CCcchhhHH---HHHc-C-------------CCcHHHH--HHHHHHHHHHHHhcchhHHHhhhcCccccceeeeehhhhH
Confidence 444333332 2322 1 2344444 4568888999999888999999998888877666665322
Q ss_pred hhhccc---cc---hhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCc
Q 037190 176 AHGFPQ---LA---KCIEVGLPALIILVLLSQYLPHVMKSKRAIFDRFAILFTVAIVWGYAEILTLTGLYDNRPPSTQTS 249 (526)
Q Consensus 176 ~~g~~~---~~---~~~~v~~~~l~~~i~l~~~~~~~~~~~~~~~r~~avLigivvG~~~a~~lg~~g~~~~~~~~~~~~ 249 (526)
..+++. +. +...++.+.+++.+++--|+.++ .|| ..++-++-+++-++++.+|+. ++...+ ..
T Consensus 189 ~~qi~kl~~wa~~~~~~~i~fvvi~~tiv~Ya~L~k~---~Kr---WLaIPl~~~~a~~~a~~lGa~--f~f~t~--pg- 257 (492)
T PF11840_consen 189 IGQIKKLFAWANGFDMGYIAFVVIIVTIVLYAYLAKI---EKR---WLAIPLCSILAGVLAFALGAP--FEFTTE--PG- 257 (492)
T ss_pred HHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHh---ccc---hhhhhHHHHHHHHHHHHcCCC--ceeecC--CC-
Confidence 222221 11 12346666666666665566543 233 445555666666667777642 111000 00
Q ss_pred cccCCCCcCCCCCcccccccccccCcccc-HHHHHHHHHHHHH-HHHHHHHHHHHHhhhcCCCC--CCCcCCCcceehhh
Q 037190 250 CRTDRSGLITAAPWIMVPFPLQWGPPLFN-AGDAFAMMAASFV-AIIESTGTFIAASRYGSATP--MPPCVLSRGIGWQG 325 (526)
Q Consensus 250 ~~~d~~~~i~~a~~~~~P~~~~fg~P~f~-~~~il~~~~~~lv-~~~esig~~~av~~~~~~~~--~~~~~i~r~l~~dG 325 (526)
..+++ ..=|..=-.-.+.|+|+++ +-+.+++.+++.. =.-|.+|+ +..++.+-.+. +..-+++.......
T Consensus 258 -lp~ln----P~YWWge~tGw~LglP~~~hfiav~PFAiLAVaMWSpDflgh-rvFqelnypk~~~kvlMnvDDTm~~~s 331 (492)
T PF11840_consen 258 -LPNLN----PMYWWGEETGWQLGLPTLEHFIAVLPFAILAVAMWSPDFLGH-RVFQELNYPKETKKVLMNVDDTMTMCS 331 (492)
T ss_pred -CCCCC----CcccccCCcccccCCCcHHHHHHhccHHHHHHHHhCchHHHH-HHHHHhcCchhhcceeecccchhHHHH
Confidence 00111 1112222222345677643 3333343332222 12366665 44555542221 11237888999999
Q ss_pred hhhhHhhhcCCCCCCccccchhhhhhhccCCC--chHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHH-HHHHHHH
Q 037190 326 LGLLLDGAFGTGSGCAASVENAGLLGLTRNGS--RRVVQISAGFMLFFSVLGKFGAILASIPLPIVAALYCV-LFAYVAS 402 (526)
Q Consensus 326 l~~ilaglfG~~p~~t~s~~n~g~i~~Tgv~S--R~~~~~~g~~lillgl~pk~~~li~~IP~~Vlggvli~-~f~~i~~ 402 (526)
+=+++++.+|+.-. ++| -..=.+-+.-.+. +-..+..|+++++.++..-= .=..+=.||+--++++ +|--+.-
T Consensus 332 iRQ~vGs~lGGgN~-~Ss-WgTymIPaaIaKRPIpggAiLtg~~Ci~~av~GyP--Mdlavw~Pvl~vALlvGVflPLle 407 (492)
T PF11840_consen 332 IRQIVGSILGGGNI-ASS-WGTYMIPAAIAKRPIPGGAILTGLLCIVAAVWGYP--MDLAVWPPVLRVALLVGVFLPLLE 407 (492)
T ss_pred HHHHHhhcccCCcc-ccc-chhhhhhHHHhcCCCCchHHHHHHHHHHHHHhcCc--chhhhcccHHHHHHHHHHHHHHHH
Confidence 99999999999744 332 1111222222222 22357788888888876411 1112225677777666 7777888
Q ss_pred hhchhcccccCC
Q 037190 403 AGLGLLQFCNLN 414 (526)
Q Consensus 403 ~Gi~~l~~~~~~ 414 (526)
+|+++.++-.-+
T Consensus 408 AGmqm~r~~k~s 419 (492)
T PF11840_consen 408 AGMQMTRKGKTS 419 (492)
T ss_pred HHHHHHhcCCcc
Confidence 999988765443
No 21
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells. Such transport also plays a vital role in acid-base movements in the stomach, pancreas, intestine, kidney, reproductive organs and the central nervous system. Functional studies have suggested four different HCO3 - transport modes. Anion exchanger proteins exchange HCO3 - for Cl- in a reversible, electroneutral manner []. Na+/HCO3 - co-transport proteins mediate the coupled movement of Na+ and HCO3 - across plasma membranes, often in an electrogenic manner []. Na- driven Cl-/HCO3 - exchange and K+/HCO3 - exchange activities have also been detected in certain cell types, although the molecular identities of the proteins responsible remain to be determined. Sequence analysis of the two families of HCO3 - transporters that have been cloned to date (the anion exchangers and Na+/HCO3 - co-transporters) reveals that they are homologous. This is not entirely unexpected, given that they both transport HCO3 - and are inhibited by a class of pharmacological agents called disulphonic stilbenes []. They share around ~25-30% sequence identity, which is distributed along their entire sequence length, and have similar predicted membrane topologies, suggesting they have ~10 transmembrane (TM) domains. This domain is found at the C terminus of many bicarbonate transport proteins. It is also found in some plant proteins responsible for boron transport []. In these proteins it covers almost the entire length of the sequence.; GO: 0006820 anion transport, 0016021 integral to membrane; PDB: 1BH7_A 1BTT_A 1BZK_A 1BTQ_A 1BTR_A 1BNX_A 1BTS_A.
Probab=97.19 E-value=0.0003 Score=76.87 Aligned_cols=182 Identities=12% Similarity=0.120 Sum_probs=0.4
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCCC-CCcccccccccccCcccc-HHHHHHHHHH
Q 037190 211 RAIFDRFAILFTVAIVWGYAEILTLTGLYDNRPPSTQTSCRTDRSGLITA-APWIMVPFPLQWGPPLFN-AGDAFAMMAA 288 (526)
Q Consensus 211 ~~~~r~~avLigivvG~~~a~~lg~~g~~~~~~~~~~~~~~~d~~~~i~~-a~~~~~P~~~~fg~P~f~-~~~il~~~~~ 288 (526)
|+.+.=+++.+++++-+.+.+.++.. .+.- ..+ .++...... -.|+--|. ...|.+. +.++++.+.+
T Consensus 277 R~~isDf~v~iaI~~~~~~~~~~~~~--~~kL-~vp-----~~f~pt~~~~r~W~v~p~---~~~p~w~~~aA~~palll 345 (510)
T PF00955_consen 277 REIISDFGVPIAILIMTLVDYLFGVD--TPKL-NVP-----SSFKPTSPGKRGWFVNPF---GSLPWWAIFAAIIPALLL 345 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhHHhhHHHHHHHHHHHHHHHhccc--cccc-CCC-----CCCCCCCCCCCCeecCcc---cCCCHHHHHHHHHHHHHH
Confidence 34445578899998888877665421 0000 000 012111111 34554331 1223333 3556666777
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCCcCCCcceehhhhhhhHhhhcCCCCCCccccchhhhhhh----------------
Q 037190 289 SFVAIIESTGTFIAASRYGSATPMPPCVLSRGIGWQGLGLLLDGAFGTGSGCAASVENAGLLGL---------------- 352 (526)
Q Consensus 289 ~lv~~~esig~~~av~~~~~~~~~~~~~i~r~l~~dGl~~ilaglfG~~p~~t~s~~n~g~i~~---------------- 352 (526)
++.-.+|+--+..-+++. +++-++....+=.+..-|+-+.++|++|-...++...++.-.+..
T Consensus 346 ~iL~F~DqnIts~ivn~~-e~kLkKg~gyH~DL~llgi~~~v~sllGLPw~~aa~~~S~~Hv~sL~~~~~~~~pGe~~~i 424 (510)
T PF00955_consen 346 TILFFMDQNITSLIVNRP-ENKLKKGSGYHLDLFLLGIITLVCSLLGLPWMNAATPQSPMHVRSLAVESETSAPGEKPKI 424 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhHhHHHhCCh-hhccCCCCcccHHHHHHHHHHHHHHHcCCCCcccCccCCHHHhCcccEEeccccCCCCCee
Confidence 888888764332222221 112223344455678889999999999977766654343332221
Q ss_pred ccCCC-chHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHHhhchhc
Q 037190 353 TRNGS-RRVVQISAGFMLFFSVLGKFGAILASIPLPIVAALYCVLFAYVASAGLGLL 408 (526)
Q Consensus 353 Tgv~S-R~~~~~~g~~lillgl~pk~~~li~~IP~~Vlggvli~~f~~i~~~Gi~~l 408 (526)
.+|.. |...+..++ |+ |+..-+..++..||.||+.|+.++| |.-...|.+..
T Consensus 425 ~~V~EqRvT~l~~~~-Li--gls~~l~pvL~~IP~~VL~GvFlym-G~~sL~gnq~~ 477 (510)
T PF00955_consen 425 VGVREQRVTGLLVHL-LI--GLSLFLLPVLKLIPMPVLYGVFLYM-GVTSLSGNQFF 477 (510)
T ss_dssp --------------------------------------------------------T
T ss_pred CeEEEecccHHHHHH-HH--HHHHHHHHHHHHhhHHHHHHHHHhh-eeeeecCccHH
Confidence 12222 334444443 33 3333467789999999999999872 33333444443
No 22
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=88.40 E-value=5 Score=44.95 Aligned_cols=122 Identities=14% Similarity=0.184 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcCCCcceehhhhhhhHhhhcCCCCCCccccchhh--hhhhccCC-
Q 037190 280 GDAFAMMAASFVAIIESTGTFIAASRYGSATPMPPCVLSRGIGWQGLGLLLDGAFGTGSGCAASVENAG--LLGLTRNG- 356 (526)
Q Consensus 280 ~~il~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~i~r~l~~dGl~~ilaglfG~~p~~t~s~~n~g--~i~~Tgv~- 356 (526)
.-++.-+.++++.+=|+++ .+..++-+ ...|+.+.=++.++.++||+.+...+. ...+ ++..+-+.
T Consensus 23 ~Dl~AGltva~valP~ama----~a~~aGv~------p~~GLyas~i~~~v~alfGgs~~~i~G-Pt~a~~~v~a~~i~~ 91 (554)
T COG0659 23 GDLLAGLTVAAVALPLAMA----FAIAAGVP------PEAGLYASIVAGIIYALFGGSRGLISG-PTGAFAVVLAAVIAS 91 (554)
T ss_pred HHHHHHHHHHHHHhHHHHH----HHHHcCCC------HHHHHHHHHHHHHHHHHHcCCccceec-cchhhHHHHHHHHHH
Confidence 3556667777777778865 34455532 347899999999999999999875332 2222 12122223
Q ss_pred --Cc------hHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHHhhchhcccccC
Q 037190 357 --SR------RVVQISAGFMLFFSVLGKFGAILASIPLPIVAALYCVLFAYVASAGLGLLQFCNL 413 (526)
Q Consensus 357 --SR------~~~~~~g~~lillgl~pk~~~li~~IP~~Vlggvli~~f~~i~~~Gi~~l~~~~~ 413 (526)
.+ .+.+.+|++.+++|++ |++.++..||.||+-|.+--+--.|....+..+...+.
T Consensus 92 ~~~~g~~~~~~~tllaGv~~i~~G~l-RLG~li~fip~pVl~Gf~~Giai~I~~~Ql~~~~G~~~ 155 (554)
T COG0659 92 LVETGLALAFLATLLAGVFQILLGLL-RLGRLIRFIPRPVLIGFTAGIAILIILTQLPVLLGLAS 155 (554)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 22 2467899999999987 89999999999999998776566667777776655544
No 23
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=86.44 E-value=20 Score=38.42 Aligned_cols=140 Identities=16% Similarity=0.116 Sum_probs=81.2
Q ss_pred hhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCcceEEecchhHHHHHHHHHhccCcccCCCcchhhhhhHHHHHHHH
Q 037190 56 VPLMGGGNVEKAQVINTSLFVAGINTLLQTSFGTRLPVVMGGSYAFNITSISIAASNRFNIYTDPEQRFKESMKTMQGAL 135 (526)
Q Consensus 56 ~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~~G~rlPiv~G~Sf~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ga~ 135 (526)
.++.|-++. +...+...|++|++-+.||. .++..+ - ...+++... +...|| ..=.++.
T Consensus 247 l~aaGy~~p-----~~~~~~~tGl~sll~ApfGg-~~~nla----a--itaAic~G~--~ah~d~--------~rR~~a~ 304 (395)
T TIGR00843 247 LKAAGYNAP-----AKPIIAAAGLAALFAAFAGG-ISIGIA----A--ITAAICMGK--DAHEDK--------DKRWIAA 304 (395)
T ss_pred HHHcCCCCC-----chHHHHHHHHHHHHHhccCC-chhhhh----H--HhHHHhcCc--ccccCc--------CccchHH
Confidence 344554443 36788899999999999864 222111 1 111233221 111222 2335678
Q ss_pred HHHHHHHHHHhhh-hhHHHHHHhhCchhHHHHHHHHHHHhhhhhccc----cc--hhhhhHHHHHHHHHHHHHhhhhhhh
Q 037190 136 IMASLFNMLIGFF-GFGTIFGRFLNPLAAVPLVTLTGLGLYAHGFPQ----LA--KCIEVGLPALIILVLLSQYLPHVMK 208 (526)
Q Consensus 136 lvaGli~~llg~~-g~~~~l~~~~pp~V~G~vi~lIGl~l~~~g~~~----~~--~~~~v~~~~l~~~i~l~~~~~~~~~ 208 (526)
+.+|++++++|++ +.+..+...+|+..+.. +-|+-|+..=... +. ++-.-+++++++.. .
T Consensus 305 i~~Gv~yll~glfag~i~~l~~~~P~~li~~---laGlAll~~~~~~l~~a~~~~~~r~~a~~tflvta------S---- 371 (395)
T TIGR00843 305 AAAGIFYLLAGLFAGAITALFAALPKELIAA---LAGLALLGAIAGNIKIALHEDQERDAALIAFLATA------S---- 371 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH---HHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH------h----
Confidence 8999999999998 77788899999877664 3355444321111 11 23334555554432 1
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHH
Q 037190 209 SKRAIFDRFAILFTVAIVWGYAE 231 (526)
Q Consensus 209 ~~~~~~r~~avLigivvG~~~a~ 231 (526)
+-..+.+.+-..|+++|.+..+
T Consensus 372 -g~~~~gigaafWgl~~G~~~~~ 393 (395)
T TIGR00843 372 -GLHFLGIGSAFWGLCAGGLAYF 393 (395)
T ss_pred -cCCcccccHHHHHHHHHHHHHH
Confidence 1234567888999999977654
No 24
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=84.82 E-value=8 Score=43.40 Aligned_cols=118 Identities=13% Similarity=0.118 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcCCCcceehhhhhhhHhhhcCCCCCCccccchhh-hh-----hhcc
Q 037190 281 DAFAMMAASFVAIIESTGTFIAASRYGSATPMPPCVLSRGIGWQGLGLLLDGAFGTGSGCAASVENAG-LL-----GLTR 354 (526)
Q Consensus 281 ~il~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~i~r~l~~dGl~~ilaglfG~~p~~t~s~~n~g-~i-----~~Tg 354 (526)
-++.-+.++++.+-|+++ .+..++-+ ..-|+.+.-+..++.++||+.+......++.- ++ ..-+
T Consensus 17 Di~aGltv~~~~iP~~~a----yA~laglp------p~~GLysa~~~~iv~alfGss~~~i~Gp~a~~sl~~~~~v~~~~ 86 (563)
T TIGR00815 17 DLMAGLTVGILLIPQAMA----YAILAGLS------PIYGLYTSFVPPFIYALFGTSRDIAIGPVAVMSLLLGSVIARVG 86 (563)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHcCCC------chhhhHHHHHHHHHhheecCCCcccCCHHHHHHHHHHHHHHHhc
Confidence 455566777888888875 34444432 23579999999999999999987654322211 11 1111
Q ss_pred CCCc----------hHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHHhhchhcc
Q 037190 355 NGSR----------RVVQISAGFMLFFSVLGKFGAILASIPLPIVAALYCVLFAYVASAGLGLLQ 409 (526)
Q Consensus 355 v~SR----------~~~~~~g~~lillgl~pk~~~li~~IP~~Vlggvli~~f~~i~~~Gi~~l~ 409 (526)
.... ...+.+|++++++|++ |++.++..||.||+.|.+.-+--.+....++.+.
T Consensus 87 ~~~~~~~~~~~~a~~l~~l~Gi~~~~~g~l-rlG~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~~ 150 (563)
T TIGR00815 87 LQYLFDCDAIRLAFTLTLLAGIFQVILGLL-RLGFLIEFLSHAVISGFMTGAAITIGLSQLKGLL 150 (563)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111 4567899999999987 8999999999999999877666666666666553
No 25
>PRK11660 putative transporter; Provisional
Probab=77.62 E-value=16 Score=40.99 Aligned_cols=118 Identities=13% Similarity=0.132 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcCCCcceehhhhhhhHhhhcCCCCCCccccchhhhhhhcc-CCC-
Q 037190 280 GDAFAMMAASFVAIIESTGTFIAASRYGSATPMPPCVLSRGIGWQGLGLLLDGAFGTGSGCAASVENAGLLGLTR-NGS- 357 (526)
Q Consensus 280 ~~il~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~i~r~l~~dGl~~ilaglfG~~p~~t~s~~n~g~i~~Tg-v~S- 357 (526)
.-++.-+.++++.+-|+++ .+..++-++ .-|+.+.=+++++.++||+.+......++........ ..+
T Consensus 31 ~D~iAGltv~~~~iPq~ma----yA~lag~pp------~~GLysa~~~~~vyal~Gss~~~~~Gp~a~~~~~~~~~~~~~ 100 (568)
T PRK11660 31 RDLIAGITVGIIAIPLAMA----LAIASGVPP------QYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVILYPVSQQF 100 (568)
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHHcCCCh------HHHHHHHHHHHHHHHHhcCCCCcccChhHHHHHHHHHHHHHh
Confidence 4456667788888888875 344555432 2379999999999999999987654322221111110 101
Q ss_pred -----chHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHHhhchhc
Q 037190 358 -----RRVVQISAGFMLFFSVLGKFGAILASIPLPIVAALYCVLFAYVASAGLGLL 408 (526)
Q Consensus 358 -----R~~~~~~g~~lillgl~pk~~~li~~IP~~Vlggvli~~f~~i~~~Gi~~l 408 (526)
-...+.+|++.+++|++ +++.++..||.||+.|.+.-+--.+....++.+
T Consensus 101 ~~~~~~~~~~l~Gii~~l~gll-rlG~l~~fip~pVi~Gf~~g~al~I~~~Ql~~~ 155 (568)
T PRK11660 101 GLAGLLVATLMSGIILILMGLA-RLGRLIEYIPLSVTLGFTSGIGIVIATLQIKDF 155 (568)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-hhhHHHhcCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 12367899999999987 699999999999999976653334555555444
No 26
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=76.72 E-value=8.6 Score=40.74 Aligned_cols=115 Identities=20% Similarity=0.218 Sum_probs=78.5
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcCCCc----ceehhhhhhhHhhhcCCCCCCccccchhhhhh
Q 037190 276 LFNAGDAFAMMAASFVAIIESTGTFIAASRYGSATPMPPCVLSR----GIGWQGLGLLLDGAFGTGSGCAASVENAGLLG 351 (526)
Q Consensus 276 ~f~~~~il~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~i~r----~l~~dGl~~ilaglfG~~p~~t~s~~n~g~i~ 351 (526)
+|+++.+..-++..++...-+..-+....+..+.. +++... -..+.|+.++.-++.==+|..+.. +.-|..-
T Consensus 2 d~~~s~~~aG~va~lvg~tg~~aiv~qaa~a~g~s---~~q~~SWl~al~~~~Gl~~i~lSl~yR~Pi~~AW-StPGaAl 77 (378)
T PF03594_consen 2 DFSLSAVSAGFVAVLVGYTGPVAIVLQAAQAAGAS---PAQIASWLFALYLGMGLTSILLSLRYRMPIVTAW-STPGAAL 77 (378)
T ss_pred CCcHHHHHHHHHHHHhhccchHHHHHHHHHHcCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhc-chHHHHH
Confidence 45666676667777777776666666666655542 233333 345567777877777778887766 4455443
Q ss_pred hccCCCch-------HHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHH
Q 037190 352 LTRNGSRR-------VVQISAGFMLFFSVLGKFGAILASIPLPIVAALYC 394 (526)
Q Consensus 352 ~Tgv~SR~-------~~~~~g~~lillgl~pk~~~li~~IP~~Vlggvli 394 (526)
......++ +++.+++++++.|+.+.+..++..||.++..+++-
T Consensus 78 L~~~~~~~~~~eavGAfl~~~~Li~l~G~tg~~~rl~~~IP~~ia~AMLA 127 (378)
T PF03594_consen 78 LATSLPGYSFAEAVGAFLVAGALILLLGVTGLFGRLMRRIPPPIASAMLA 127 (378)
T ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 33333222 47889999999999999999999999999888654
No 27
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=56.47 E-value=2.4e+02 Score=30.36 Aligned_cols=77 Identities=19% Similarity=0.291 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcceEEecchhHHHHHHHHHhccCcccCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhhh
Q 037190 70 INTSLFVAGINTLLQTSFGTRLPVVMGGSYAFNITSISIAASNRFNIYTDPEQRFKESMKTMQGALIMASLFNMLIGFFG 149 (526)
Q Consensus 70 i~~~l~~sGi~Tllq~~~G~rlPiv~G~Sf~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~g 149 (526)
++..+++-|+++++=+++|. .|.. ++.- -..+.+..+. ..-. +...+|++.+++++++
T Consensus 271 ~~r~l~adGl~~i~aglfG~-~p~t---~~se---n~g~~~~T~~--------------~sr~-~~~~~a~~~i~~~l~p 328 (415)
T TIGR00801 271 LHRGVLADGLATLLAGLFGG-FPNT---TFAQ---NIGVIALTRV--------------ASRW-VIVGAAVILIALGFFP 328 (415)
T ss_pred ccchHHHhhHHHHHHHhcCC-CCCc---chhh---hheeeeecCC--------------CchH-HHHHHHHHHHHHHHHH
Confidence 56899999999999999974 6652 1111 1111111111 1111 4678888999999987
Q ss_pred hHHHHHHhhCchhHHHHHH
Q 037190 150 FGTIFGRFLNPLAAVPLVT 168 (526)
Q Consensus 150 ~~~~l~~~~pp~V~G~vi~ 168 (526)
.+..+...+|..|.|.+.+
T Consensus 329 k~~~l~~~iP~~vlgg~~l 347 (415)
T TIGR00801 329 KIAALITSIPSPVLGGASI 347 (415)
T ss_pred HHHHHHHhCCHHHHHHHHH
Confidence 7899999999877775533
No 28
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=49.88 E-value=3.8e+02 Score=29.31 Aligned_cols=64 Identities=19% Similarity=0.143 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCcCCCcceehhhhhhhHhhhcCCCCCCc--cccchhhhhhhccCCCch
Q 037190 293 IIESTGTFIAASRYGSATPMPPCVLSRGIGWQGLGLLLDGAFGTGSGCA--ASVENAGLLGLTRNGSRR 359 (526)
Q Consensus 293 ~~esig~~~av~~~~~~~~~~~~~i~r~l~~dGl~~ilaglfG~~p~~t--~s~~n~g~i~~Tgv~SR~ 359 (526)
.++.+|-..+.+. ++++ +..+...+...-|+-+++.-.+|+....+ .|+...+....+.-.+|+
T Consensus 242 ~~~ilGa~~a~a~--g~~~-~~~~~~~~~G~~g~~~~lil~l~~~ttN~~nlYsa~ls~~~i~~~l~k~ 307 (442)
T COG1457 242 FMMILGAALAAAA--GNAD-SIADVMLGLGGFGLPAILILVLGTVTTNANNLYSAGLSFANIIPKLSKV 307 (442)
T ss_pred HHHHHHHHHHHhc--CCCc-hHHHHHHhcccHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhhhhhhhH
Confidence 3455555444433 3222 12233333333678888888888876543 243455665556545554
No 29
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=47.84 E-value=82 Score=34.28 Aligned_cols=77 Identities=14% Similarity=0.193 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcceEEecchhHHHHHHHHHhccCcccCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhh
Q 037190 69 VINTSLFVAGINTLLQTSFGTRLPVVMGGSYAFNITSISIAASNRFNIYTDPEQRFKESMKTMQGALIMASLFNMLIGFF 148 (526)
Q Consensus 69 li~~~l~~sGi~Tllq~~~G~rlPiv~G~Sf~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~ 148 (526)
-+.+++.+-|++|++-+++| ..|. .+|.-- ..+.+..+. ..++ ....+|++.+++|++
T Consensus 276 ~l~rgi~~dGi~s~laglfg-~~p~---tt~sqN---vGvi~~TgV------~SR~---------v~~~aa~ilillgl~ 333 (433)
T PRK11412 276 RYRRSFVATGFMTLITVPLA-VIPF---SPFVSS---IGLLTQTGD------YRRR---------SFIYGSVMCLLVALI 333 (433)
T ss_pred ccccchhhccHHHHHHHhcC-CCCC---Cchhhh---hhhhhhcCC------chhH---------HHHHHHHHHHHHHHH
Confidence 45789999999999999886 4554 222111 111111111 0111 256788999999998
Q ss_pred hhHHHHHHhhCchhHHHHH
Q 037190 149 GFGTIFGRFLNPLAAVPLV 167 (526)
Q Consensus 149 g~~~~l~~~~pp~V~G~vi 167 (526)
+-+..+..-+|..|.|.+.
T Consensus 334 PK~~alia~IP~pVlGg~~ 352 (433)
T PRK11412 334 PALTRLFCSIPLPVSSAVM 352 (433)
T ss_pred HHHHHHHHhCCHHHHHHHH
Confidence 8888889999977777653
No 30
>PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif
Probab=47.23 E-value=51 Score=27.33 Aligned_cols=61 Identities=20% Similarity=0.246 Sum_probs=46.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHhhHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCcceEEecchh
Q 037190 29 PWSEAMILGFQHYLVMLGTTVIIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQTSFGTRLPVVMGGSYA 100 (526)
Q Consensus 29 p~~~~~~~GlQh~l~m~~~~i~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~~G~rlPiv~G~Sf~ 100 (526)
.+.+.++.|+.-.+..++..++...+ .|+++ ...++.+.+..++.++||..--++.|++..
T Consensus 15 ~~~~D~~aGltva~~~iPq~~a~A~l----Ag~pp-------~~GLy~a~~~~liyalfG~s~~~~~Gp~a~ 75 (84)
T PF13792_consen 15 NLRGDLLAGLTVALVAIPQGMAYALL----AGVPP-------IYGLYAAIIPPLIYALFGSSRHMIVGPTAA 75 (84)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH----cCCCC-------CeeeHHHHHHHHHHhhccCCCccccChHHH
Confidence 45788999998776655544444332 78998 678999999999999999888888887644
No 31
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=47.02 E-value=4.5e+02 Score=29.28 Aligned_cols=127 Identities=17% Similarity=0.125 Sum_probs=68.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCcceE--EecchhHHH
Q 037190 26 SSPPWSEAMILGFQHYLVMLGTTVIIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQTSFGTRLPVV--MGGSYAFNI 103 (526)
Q Consensus 26 ~~pp~~~~~~~GlQh~l~m~~~~i~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~~G~rlPiv--~G~Sf~~l~ 103 (526)
.+|+....+..+.-..+...+.....|++..+.+|.++.....+..+.-+++-+++++...+..|++.- ...+....+
T Consensus 216 ~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a 295 (524)
T PF05977_consen 216 SSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFA 295 (524)
T ss_pred cchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHH
Confidence 345555555555544444333344568887778899988777777766677777777777655544321 111111111
Q ss_pred HHHHHHhccCcccCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhCchhHHHH
Q 037190 104 TSISIAASNRFNIYTDPEQRFKESMKTMQGALIMASLFNMLIGFFGFGTIFGRFLNPLAAVPL 166 (526)
Q Consensus 104 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~g~~~~l~~~~pp~V~G~v 166 (526)
......+.. .....+..+.++.|......-.. .-..+.+..|+.+.|=+
T Consensus 296 ~~~~~lal~-------------~~~~~~~~~l~l~G~~~~~~~~~-~~t~~Q~~~P~~~~GRv 344 (524)
T PF05977_consen 296 LALLLLALS-------------PSFWLALIALFLAGAAWIIANSS-LNTLVQLSVPDWVRGRV 344 (524)
T ss_pred HHHHHHhcc-------------hHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCHHHHhHH
Confidence 111111110 12334455566667665554322 33556778888776654
No 32
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=46.69 E-value=3.9e+02 Score=28.49 Aligned_cols=76 Identities=14% Similarity=0.189 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcceEEecchhHHHHHHHHHhccCcccCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhh
Q 037190 69 VINTSLFVAGINTLLQTSFGTRLPVVMGGSYAFNITSISIAASNRFNIYTDPEQRFKESMKTMQGALIMASLFNMLIGFF 148 (526)
Q Consensus 69 li~~~l~~sGi~Tllq~~~G~rlPiv~G~Sf~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~ 148 (526)
=++..+.+-|+++++=+++| ..|.. ++.- -..+.+..+. .. --+.+++|++.++++++
T Consensus 254 ~~~~~l~~~Gi~~i~aglfG-~~p~t---~~~~---~~~~~~~tg~--------------~s-r~~~~~~~~~lil~~l~ 311 (406)
T TIGR03173 254 DLAGGLRADGLGSALGGLFN-TFPYT---SFSQ---NVGLVQLTGV--------------KS-RYVVAAAGVILVLLGLF 311 (406)
T ss_pred hccchHHhccHHHHHHHHhC-CCCCc---chhh---hHHHHHHhCC--------------Cc-hHhHHHHHHHHHHHHHH
Confidence 35788999999999999997 47742 2211 0011111111 00 11237788888888888
Q ss_pred hhHHHHHHhhCchhHHHH
Q 037190 149 GFGTIFGRFLNPLAAVPL 166 (526)
Q Consensus 149 g~~~~l~~~~pp~V~G~v 166 (526)
+.+..+...+|..|.|.+
T Consensus 312 ~~~~~l~~~iP~~vlgg~ 329 (406)
T TIGR03173 312 PKLAALVASIPQPVLGGA 329 (406)
T ss_pred HHHHHHHHhCCHHHHHHH
Confidence 777999999998777764
No 33
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=44.24 E-value=3.3e+02 Score=28.88 Aligned_cols=124 Identities=19% Similarity=0.245 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCcceEEecchhHHHHHHHHHhccC
Q 037190 34 MILGFQHYLVMLGTTVIIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQTSFGTRLPVVMGGSYAFNITSISIAASNR 113 (526)
Q Consensus 34 ~~~GlQh~l~m~~~~i~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~~G~rlPiv~G~Sf~~l~~~~~i~~~~~ 113 (526)
++.-+...++.....+---..+++..|.+.++ ..-+.+++.+-|++|++-+++|. .|.. ++.--. ...+..+
T Consensus 234 i~~~~~~~lv~~~es~G~~~a~~~~~~~~~~~-~~~~~r~l~~dg~~~~l~gl~G~-~~~t---~~~en~---g~i~~t~ 305 (389)
T PF00860_consen 234 ILTFLIFALVAMFESIGTIVAVARIAGKDDPR-PPRIRRGLLADGLGTILAGLFGT-SPTT---TYSENA---GGIAATG 305 (389)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHTS-TCC-CCCHHHHHHHHHHHHHHHHHHT----EE---E-HHHH---HHHHHHT
T ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHhCCCCcc-chhhcccceeeeeeeeechhhcC-CCCc---cccccc---hhhhhhc
Confidence 33333333333333333333344445655443 34468999999999999999987 5542 211100 1111111
Q ss_pred cccCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhCchh-HHHHHHHHHHHhhhhhccc
Q 037190 114 FNIYTDPEQRFKESMKTMQGALIMASLFNMLIGFFGFGTIFGRFLNPLA-AVPLVTLTGLGLYAHGFPQ 181 (526)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~g~~~~l~~~~pp~V-~G~vi~lIGl~l~~~g~~~ 181 (526)
. .+-+ ..+.++++.++++++..+..+...+|..| .|..+.+.|. ++..+++.
T Consensus 306 v-----------~Sr~----~~~~a~~~~i~~~~~p~~~~l~~~IP~~v~gg~~lv~~g~-i~~~gi~~ 358 (389)
T PF00860_consen 306 V-----------ASRR----VGLTAGVILILFGLSPKFAPLFASIPSPVIGGPLLVLFGM-IMMSGIRN 358 (389)
T ss_dssp B-------------HH----HHHHHHHHHHHHT--HHHHHHHTTS-HHHHHHHHHHHHHH-HHHHHHHH
T ss_pred c-----------ccce----eeeHHHHHHHHHhhHHHHHHHHHHHHHHHhccchHHHHHH-HHHHHhHh
Confidence 0 0011 35677888899999888888999999777 5555555554 34444443
No 34
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=42.48 E-value=39 Score=27.99 Aligned_cols=29 Identities=14% Similarity=0.273 Sum_probs=17.2
Q ss_pred chhHHHHHHHHHhhhcCCCCCCcccccccccccc
Q 037190 466 PATVAIIVAYFLDCTHSLGHSATRQDCGRHWWGK 499 (526)
Q Consensus 466 gi~~g~i~ai~Ln~~~~~~~~~~~~~~g~~~~~~ 499 (526)
++.+|+++-+.= -+-+|+.|-..++||=+
T Consensus 49 ~IFiGAllWL~G-----ARigGrE~VaDRYwWvk 77 (89)
T PF10762_consen 49 SIFIGALLWLVG-----ARIGGREKVADRYWWVK 77 (89)
T ss_pred HHHHHHHHHHhc-----ccccCcchhhhhHHHHH
Confidence 555666554332 23446777788899944
No 35
>COG3817 Predicted membrane protein [Function unknown]
Probab=42.43 E-value=1.3e+02 Score=30.41 Aligned_cols=142 Identities=15% Similarity=0.072 Sum_probs=69.8
Q ss_pred HHHHHHHHhhhhhHHHHHHhhCchhHHHHHHHHHHHhhhhhccccc-----------------hhhh-h-HHHHHHHHHH
Q 037190 138 ASLFNMLIGFFGFGTIFGRFLNPLAAVPLVTLTGLGLYAHGFPQLA-----------------KCIE-V-GLPALIILVL 198 (526)
Q Consensus 138 aGli~~llg~~g~~~~l~~~~pp~V~G~vi~lIGl~l~~~g~~~~~-----------------~~~~-v-~~~~l~~~i~ 198 (526)
.|++..+++++-+.+ .+.|+.++|.++.++.+. ...+.-..| .|+. + ++..-++.++
T Consensus 35 t~~FW~l~~~tFl~g---~~lp~~viG~ivillAli-agf~~v~~G~~~~~~~e~re~~A~rlgnrlfiPal~ip~~tli 110 (313)
T COG3817 35 TGLFWGLFSLTFLGG---DRLPNIVIGLIVILLALI-AGFGQVKIGALPELSPEEREKSANRLGNRLFIPALLIPVLTLI 110 (313)
T ss_pred chHHHHHHHHHHhcc---ccccchhHhHHHHHHHHH-HhcCCcccCCCCCCCHHHHHHHHHHhcCEeehHHHHHHHHHHH
Confidence 345555555543322 689999999987776652 221111111 1111 1 1111122334
Q ss_pred HHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCCCCCcccccccccccCcccc
Q 037190 199 LSQYLPHVMKSKRAIFDRFAILFTVAIVWGYAEILTLTGLYDNRPPSTQTSCRTDRSGLITAAPWIMVPFPLQWGPPLFN 278 (526)
Q Consensus 199 l~~~~~~~~~~~~~~~r~~avLigivvG~~~a~~lg~~g~~~~~~~~~~~~~~~d~~~~i~~a~~~~~P~~~~fg~P~f~ 278 (526)
.+..+|.+++...+---..++-+|.+++++.+..+... -|. +.++++ -+.++ +.+
T Consensus 111 g~~lf~~~s~~~pknatl~al~i~~i~a~vla~~mt~~--~p~--------------~~~~E~-----~rl~d----~v~ 165 (313)
T COG3817 111 GSLLFPDLSFFDPKNATLMALGIAAIVATVLACVMTKQ--TPK--------------AAVQEA-----RRLMD----QVS 165 (313)
T ss_pred HHHHhccccccCCcchhHHHHHHHHHHHHHHHHHHhcc--Chh--------------hHHHHH-----HHHHH----Hhh
Confidence 44555655432222223456667777777766655321 000 001111 01111 456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 037190 279 AGDAFAMMAASFVAIIESTGTFIAASRYGS 308 (526)
Q Consensus 279 ~~~il~~~~~~lv~~~esig~~~av~~~~~ 308 (526)
|..+++=+..++-..+-..|--.++++...
T Consensus 166 wa~iLPQ~LaaLG~vFa~aGvG~~ia~L~~ 195 (313)
T COG3817 166 WAAILPQMLAALGAVFASAGVGDVIAHLIS 195 (313)
T ss_pred HHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Confidence 778888776666666666666667766654
No 36
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=41.13 E-value=5.2e+02 Score=28.36 Aligned_cols=154 Identities=8% Similarity=-0.019 Sum_probs=75.6
Q ss_pred CCCCCCCCCCCCccCCCC-CCcc-ccCCCCCHHHHHHHHHHHHHHHHHHHhhH-HHH---HhhhcCCChHHHHHHHHHHH
Q 037190 1 MASKPDECQPHPVKEQLP-GVDF-CVSSSPPWSEAMILGFQHYLVMLGTTVII-PTT---LVPLMGGGNVEKAQVINTSL 74 (526)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~y-~~~~~pp~~~~~~~GlQh~l~m~~~~i~~-Pli---i~~a~gl~~~~~~~li~~~l 74 (526)
|+-+.|||.++.-.+=.+ |..+ +-+.|-=.++.+....=-+...+..-... |+. ....+|++++|...+.+...
T Consensus 1 ~~~~~~~~~~~~~~~w~pe~~~~w~~~~~~~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~ 80 (462)
T PRK15034 1 MALQNEKNSRYLLRDWKPENPAFWENKGKHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPS 80 (462)
T ss_pred CCcccccCCcccccCCCCCChHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHH
Confidence 555667766655433322 2222 22223323345544443344333332222 222 22248999998888777777
Q ss_pred HHHHHHHHHHHH----hcCCcceEEecchhHHHHHHHHHhccCcccCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhhhh
Q 037190 75 FVAGINTLLQTS----FGTRLPVVMGGSYAFNITSISIAASNRFNIYTDPEQRFKESMKTMQGALIMASLFNMLIGFFGF 150 (526)
Q Consensus 75 ~~sGi~Tllq~~----~G~rlPiv~G~Sf~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~g~ 150 (526)
+..++.-+..+. +|.|.....+.....++......+.. ++. .++...+-.-++.|+--..+. ..
T Consensus 81 l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~------~~~----~s~~~lli~r~l~Gigg~~f~--~~ 148 (462)
T PRK15034 81 VSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQ------NPN----TPFGIFIVIALLCGFAGANFA--SS 148 (462)
T ss_pred HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc------ccC----CCHHHHHHHHHHHHHHHHhHH--HH
Confidence 777766555553 78887665554333333222211100 000 123444444444444322222 23
Q ss_pred HHHHHHhhCchhHHHH
Q 037190 151 GTIFGRFLNPLAAVPL 166 (526)
Q Consensus 151 ~~~l~~~~pp~V~G~v 166 (526)
.+.+.+++|+.--|..
T Consensus 149 ~~~vs~wfp~~~rG~A 164 (462)
T PRK15034 149 MGNISFFFPKAKQGSA 164 (462)
T ss_pred HHHHHHHCCHhHhHHH
Confidence 4778899998876653
No 37
>PF13142 DUF3960: Domain of unknown function (DUF3960)
Probab=37.07 E-value=19 Score=29.31 Aligned_cols=42 Identities=10% Similarity=0.195 Sum_probs=29.3
Q ss_pred HHhhhcCCCCCCccccccccccccccccCCCCC-------CCccccCCc
Q 037190 476 FLDCTHSLGHSATRQDCGRHWWGKFLYFNRDAR-------TSDFYSLPC 517 (526)
Q Consensus 476 ~Ln~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------~~~~~~~p~ 517 (526)
+..+++|-+++|..|||-+..|++-.--++++- .++.|.+|-
T Consensus 24 l~~llvp~~pkg~~KerTIl~w~~KefyKeenli~~i~Ygm~~~~~lp~ 72 (87)
T PF13142_consen 24 LFSLLVPCEPKGEDKERTILMWKEKEFYKEENLIPFILYGMKKGYQLPQ 72 (87)
T ss_pred HHHHhcCCCCCCCCceeEEeeechhhHHhhhccceeEEeeccccccCcc
Confidence 456788988899999999999976433333332 466676663
No 38
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=35.40 E-value=3.5e+02 Score=27.19 Aligned_cols=36 Identities=25% Similarity=0.202 Sum_probs=20.3
Q ss_pred hHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHH
Q 037190 50 IIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQT 85 (526)
Q Consensus 50 ~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~ 85 (526)
..|..+....|.++++...+.....+...++.++-.
T Consensus 241 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g 276 (394)
T TIGR00883 241 YLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSG 276 (394)
T ss_pred HHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 356666566788877665554444444444444443
No 39
>PRK10692 hypothetical protein; Provisional
Probab=30.65 E-value=1.1e+02 Score=25.53 Aligned_cols=29 Identities=17% Similarity=0.259 Sum_probs=17.4
Q ss_pred chhHHHHHHHHHhhhcCCCCCCcccccccccccc
Q 037190 466 PATVAIIVAYFLDCTHSLGHSATRQDCGRHWWGK 499 (526)
Q Consensus 466 gi~~g~i~ai~Ln~~~~~~~~~~~~~~g~~~~~~ 499 (526)
++.+|+++-++= -+-+|+.|-..++||=+
T Consensus 49 ~IFiGAllWL~G-----ArigGRE~VaDRYwwvk 77 (92)
T PRK10692 49 SIFVGALLWLAG-----ARVGGREQVADRYWWVR 77 (92)
T ss_pred HHHHHHHHHHhc-----ccccCcchhhhhHHHHh
Confidence 556666554332 23446777788899944
No 40
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=28.83 E-value=9.1e+02 Score=28.27 Aligned_cols=39 Identities=5% Similarity=-0.030 Sum_probs=30.2
Q ss_pred hcCCChHHHHHHHHHHHHHHHHHHHHHHH----hcCCcceEEe
Q 037190 58 LMGGGNVEKAQVINTSLFVAGINTLLQTS----FGTRLPVVMG 96 (526)
Q Consensus 58 a~gl~~~~~~~li~~~l~~sGi~Tllq~~----~G~rlPiv~G 96 (526)
..|++..+...+.+..+++..+++++-.+ +|.|..++.+
T Consensus 196 ~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~ 238 (742)
T TIGR01299 196 DLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLIC 238 (742)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 47899988888888888888999988875 5766555443
No 41
>PRK10489 enterobactin exporter EntS; Provisional
Probab=27.97 E-value=7e+02 Score=25.91 Aligned_cols=59 Identities=14% Similarity=0.105 Sum_probs=29.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhhHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHh
Q 037190 28 PPWSEAMILGFQHYLVMLGTTVIIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQTSF 87 (526)
Q Consensus 28 pp~~~~~~~GlQh~l~m~~~~i~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~~ 87 (526)
+.....++.++..... .+.....|....+..|+++.+...+.....++..+++++-.++
T Consensus 224 ~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l 282 (417)
T PRK10489 224 PVVGGIALLGGLLTMA-SAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWL 282 (417)
T ss_pred hHHHHHHHHHHHHHHH-HhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444444433322 1222345666666678887665554444444444555555444
No 42
>PRK11375 allantoin permease; Provisional
Probab=26.54 E-value=8.9e+02 Score=26.61 Aligned_cols=26 Identities=12% Similarity=0.139 Sum_probs=18.0
Q ss_pred cchhHHHHHHHHHhhhcCCCCCCccc
Q 037190 465 SPATVAIIVAYFLDCTHSLGHSATRQ 490 (526)
Q Consensus 465 sgi~~g~i~ai~Ln~~~~~~~~~~~~ 490 (526)
.+++++.++..+|+...++++++..|
T Consensus 456 ~g~iva~~~Y~~l~~~~~~~~~~~~~ 481 (484)
T PRK11375 456 VGVIVAFVAYALLKKRTTAEKTGEQK 481 (484)
T ss_pred HHHHHHHHHHHHHHhhCCCccccccc
Confidence 47778888888888877765554433
No 43
>PTZ00207 hypothetical protein; Provisional
Probab=23.85 E-value=1.1e+03 Score=26.77 Aligned_cols=79 Identities=10% Similarity=0.031 Sum_probs=40.5
Q ss_pred CCCCccccCCCCCHHHHHHHHHHHHHH--HHHHHhhHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHH----HhcCC
Q 037190 17 LPGVDFCVSSSPPWSEAMILGFQHYLV--MLGTTVIIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQT----SFGTR 90 (526)
Q Consensus 17 ~~~~~y~~~~~pp~~~~~~~GlQh~l~--m~~~~i~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~----~~G~r 90 (526)
..+....+||...|...+..-+-+... ++.-.+..|.+ .+.+|+++.|...+... ....|+..+.-+ .+|.|
T Consensus 14 ~~~~~~~~~e~~Rw~~lva~~~~~~~~g~~y~fsv~s~~L-~~~lgls~~~l~~i~sv-g~~~g~~~lp~G~L~Dr~G~R 91 (591)
T PTZ00207 14 STANQKPINEPRRFALLVLGAFCSICTSFMYAFNLISGAM-QARYNLTQRDLSTITTV-GIAVGYFLLPYSFIYDYLGPR 91 (591)
T ss_pred cccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCcH
Confidence 355667788888886444333222211 11112323433 45589999887665443 233444433333 35666
Q ss_pred cceEEec
Q 037190 91 LPVVMGG 97 (526)
Q Consensus 91 lPiv~G~ 97 (526)
.-+..|.
T Consensus 92 ~vllig~ 98 (591)
T PTZ00207 92 PIFVLSM 98 (591)
T ss_pred HHHHHHH
Confidence 6555553
No 44
>COG4129 Predicted membrane protein [Function unknown]
Probab=23.35 E-value=8.8e+02 Score=25.44 Aligned_cols=76 Identities=20% Similarity=0.332 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHhcCCcceEEecchhHHHHHHHHHhccCcccCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhhhhH
Q 037190 72 TSLFVAGINTLLQTSFGTRLPVVMGGSYAFNITSISIAASNRFNIYTDPEQRFKESMKTMQGALIMASLFNMLIGFFGFG 151 (526)
Q Consensus 72 ~~l~~sGi~Tllq~~~G~rlPiv~G~Sf~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~g~~ 151 (526)
.|-++.+++.++--++|+..|. |+.+.+++++..+ -..+...+++-++|.++-+++-.+++.++|
T Consensus 15 Kt~ia~~La~~ia~~l~~~~~~-----~A~i~AV~~l~~t--------~~~s~~~~~~r~~g~~iG~~~a~l~~~l~g-- 79 (332)
T COG4129 15 KTGLAAGLALLIAHLLGLPQPA-----FAGISAVLCLSPT--------IKRSLKRALQRLLGNALGAILAVLFFLLFG-- 79 (332)
T ss_pred HHHHHHHHHHHHHHHhCCCchH-----HHHHHHhhcccCc--------chHHHHHHHHHHHHHHHHHHHHHHHHHHcC--
Confidence 4557777777776677776653 4444444333221 123445577777777665555555444432
Q ss_pred HHHHHhhCchhHHHHHH
Q 037190 152 TIFGRFLNPLAAVPLVT 168 (526)
Q Consensus 152 ~~l~~~~pp~V~G~vi~ 168 (526)
..|+..|.+++
T Consensus 80 ------~~~~~~~v~~~ 90 (332)
T COG4129 80 ------QNPIAFGVVLL 90 (332)
T ss_pred ------ccHHHHHHHHH
Confidence 34555665543
No 45
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=21.69 E-value=7.9e+02 Score=24.28 Aligned_cols=38 Identities=18% Similarity=0.190 Sum_probs=21.6
Q ss_pred hhHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHH
Q 037190 49 VIIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQTS 86 (526)
Q Consensus 49 i~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~ 86 (526)
...|....+..|.++.+...+.....++..+++++...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGL 269 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44577776667888876655444444444444444443
No 46
>KOG4085 consensus Uncharacterized conserved protein [Function unknown]
Probab=21.00 E-value=2e+02 Score=26.43 Aligned_cols=44 Identities=23% Similarity=0.231 Sum_probs=34.4
Q ss_pred cCCCchHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 037190 354 RNGSRRVVQISAGFMLFFSVLGKFGAILASIPLPIVAALYCVLFAYVA 401 (526)
Q Consensus 354 gv~SR~~~~~~g~~lillgl~pk~~~li~~IP~~Vlggvli~~f~~i~ 401 (526)
+-.+|.+++.++++.+++|+|. .++.=|...++|++-++-+.+.
T Consensus 29 r~l~rl~gilgaf~~~~fGvf~----~ITls~~c~vAgvlqm~agfiv 72 (175)
T KOG4085|consen 29 RWLCRLSGILGAFSCAIFGVFN----CITLSPLCIVAGVLQMMAGFIV 72 (175)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh----HHhhhHHHHHHHHHHHHHHHHH
Confidence 4456778999999999988764 7788889999998877666554
Done!