Query 037190
Match_columns 526
No_of_seqs 190 out of 1880
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 16:15:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037190.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037190hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qe7_A Uracil permease; uracil 100.0 3.7E-70 1.3E-74 580.6 30.0 400 18-493 2-418 (429)
2 3qe7_A Uracil permease; uracil 68.9 14 0.00047 38.6 8.7 76 319-395 45-131 (429)
3 3o7q_A L-fucose-proton symport 38.8 2.9E+02 0.0098 27.0 13.2 100 51-164 49-152 (438)
4 3o7q_A L-fucose-proton symport 29.1 1.1E+02 0.0037 30.1 7.4 60 27-86 257-317 (438)
5 1pw4_A Glycerol-3-phosphate tr 27.8 4.3E+02 0.015 25.7 13.7 39 48-86 272-310 (451)
6 2k9u_B Filamin-binding LIM pro 26.0 26 0.00089 21.4 1.1 13 1-13 1-13 (26)
7 1pw4_A Glycerol-3-phosphate tr 19.6 2.7E+02 0.0092 27.3 8.1 61 31-93 28-95 (451)
8 4aps_A DI-OR tripeptide H+ sym 18.1 5.8E+02 0.02 25.2 10.5 47 50-96 35-91 (491)
9 2gfp_A EMRD, multidrug resista 11.8 72 0.0024 30.9 1.3 16 52-67 223-238 (375)
10 2gfp_A EMRD, multidrug resista 8.6 1.2E+03 0.04 21.8 11.7 41 56-96 27-71 (375)
No 1
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli}
Probab=100.00 E-value=3.7e-70 Score=580.61 Aligned_cols=400 Identities=24% Similarity=0.359 Sum_probs=349.6
Q ss_pred CCCccccCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHh-cCCcceEEe
Q 037190 18 PGVDFCVSSSPPWSEAMILGFQHYLVMLGTTVIIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQTSF-GTRLPVVMG 96 (526)
Q Consensus 18 ~~~~y~~~~~pp~~~~~~~GlQh~l~m~~~~i~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~~-G~rlPiv~G 96 (526)
.|+.|++|||||+++++++|+||+++|+++++++|+++ |+|+ +++++++|++|++|+++ |+|+|+++|
T Consensus 2 ~~~~~~~~~~~~~~~~i~~GlQh~lam~~~~v~~Plil----Gl~~-------~~~l~~agi~Tllq~~~~~~~lP~~~G 70 (429)
T 3qe7_A 2 TRRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLF----HINP-------ATVLLFNGIGTLLYLFICKGKIPAYLG 70 (429)
T ss_dssp --CCBCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT----TSCH-------HHHHHHHHHHHHHHHHHTTTCCCCCEE
T ss_pred CCcccCcccCCCHHHHHHHHHHHHHHHHHHHHHhHHHh----CCCH-------HHHHHHHHHHHHHHHHHcCCCCCeEec
Confidence 45789999999999999999999999999999999997 8887 47999999999999986 899999999
Q ss_pred cchhHHHHHHHHHhccCcccCCCcchhhhhhHHHHHHHHHHHHHHHHHHhhh--hhH-HHHHHhhCchhHHHHHHHHHHH
Q 037190 97 GSYAFNITSISIAASNRFNIYTDPEQRFKESMKTMQGALIMASLFNMLIGFF--GFG-TIFGRFLNPLAAVPLVTLTGLG 173 (526)
Q Consensus 97 ~Sf~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ga~lvaGli~~llg~~--g~~-~~l~~~~pp~V~G~vi~lIGl~ 173 (526)
+||+|++++..+.. + +|++++|+++++|+++++++++ ++. +|++|+|||+|+|.++++||++
T Consensus 71 ~sfafi~~~~~i~~-~--------------g~~~~~gavi~aGli~ill~~~~~~~g~~~l~~~~PpvviG~~i~~IGl~ 135 (429)
T 3qe7_A 71 SSFAFISPVLLLLP-L--------------GYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLE 135 (429)
T ss_dssp ECGGGHHHHHHHGG-G--------------CHHHHHHHHHHHHHHHHHHHHHHHTTCSHHHHHHCCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHh-c--------------CHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCCeeeHHHHHHHHHH
Confidence 99999999887654 2 6899999999999999999987 543 6999999999999999999999
Q ss_pred hhhhhccccc-----------hhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhcCCCCCC
Q 037190 174 LYAHGFPQLA-----------KCIEVGLPALIILVLLSQYLPHVMKSKRAIFDRFAILFTVAIVWGYAEILTLTGLYDNR 242 (526)
Q Consensus 174 l~~~g~~~~~-----------~~~~v~~~~l~~~i~l~~~~~~~~~~~~~~~r~~avLigivvG~~~a~~lg~~g~~~~~ 242 (526)
+++.++++.+ .++.+++.+++++++++++.| +++|++++|+|+++||++++.+|.
T Consensus 136 l~~~~~~~~~~~~~~~~~~~~~~~~la~~tl~iii~~~~~~k-------g~~~~~aiLigivvg~~~a~~~G~------- 201 (429)
T 3qe7_A 136 LAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFR-------GFLAIIPILIGVLVGYALSFAMGI------- 201 (429)
T ss_dssp HHHHHHHHHTSSCBTTBCCCHHHHHHHHHHHHHHHHHHHSSS-------TTTTTHHHHHHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHhccccCCCCccccHHHHHHHHHHHHHHHHHHHHhc-------ccchhhHHHHHHHHHHHHHHHhcC-------
Confidence 9998776532 357788888888888877654 568999999999999999999975
Q ss_pred CCCCCCccccCCCCcCCCCCcccccccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcCCCccee
Q 037190 243 PPSTQTSCRTDRSGLITAAPWIMVPFPLQWGPPLFNAGDAFAMMAASFVAIIESTGTFIAASRYGSATPMPPCVLSRGIG 322 (526)
Q Consensus 243 ~~~~~~~~~~d~~~~i~~a~~~~~P~~~~fg~P~f~~~~il~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~i~r~l~ 322 (526)
+|++. +.++||+++|. |+.|+||++.+..+++++++.++|++|++.++++.++++.+++++.||++.
T Consensus 202 ---------~d~~~-v~~a~~~~lP~---~~~P~f~~~~i~~i~~i~lV~~~Eslg~~~av~~~~g~~~~~~~~~~r~l~ 268 (429)
T 3qe7_A 202 ---------VDTTP-IINAHWFALPT---LYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMF 268 (429)
T ss_dssp ---------TTSSH-HHHSCSSCCCC---CCCCCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCTCCCCCHHHHHH
T ss_pred ---------CCccc-ccccccccccC---CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCcchHHH
Confidence 35443 56789999995 577999999999999999999999999999999999876556789999999
Q ss_pred hhhhhhhHhhhcCCCCCCccccchhhhhhhccCCCchHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 037190 323 WQGLGLLLDGAFGTGSGCAASVENAGLLGLTRNGSRRVVQISAGFMLFFSVLGKFGAILASIPLPIVAALYCVLFAYVAS 402 (526)
Q Consensus 323 ~dGl~~ilaglfG~~p~~t~s~~n~g~i~~Tgv~SR~~~~~~g~~lillgl~pk~~~li~~IP~~Vlggvli~~f~~i~~ 402 (526)
+||++|+++|+||+.|.|+++ ||+|+++.||++||++.+++|+++++++++||++++++.||.||+||+++++|+++.+
T Consensus 269 adGla~i~~glfGg~p~Tt~~-en~g~i~~tg~~sr~~~~~ag~~lillgl~pk~~al~~~IP~~vlgg~~l~lfg~i~~ 347 (429)
T 3qe7_A 269 ANGLSTVISGFFGSTPNTTYG-ENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGA 347 (429)
T ss_dssp HHHHHHHHHHHHTCCCEEECH-HHHHHHHHHTBCCHHHHHHHHHHHHHHTCCHHHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcchHH-HhHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 999999999999999987755 9999999999999999999999999999999999999999999999999999999999
Q ss_pred hhchhc--ccccCCCCccEEeehHHHHhhhhhhHHhhhhhhhcCCCCccccccchhhHHHHHhccchhHHHHHHHHHhhh
Q 037190 403 AGLGLL--QFCNLNSFRSKFILGFSLFTGLSVSRYFNEYLYISGHDPVHTASTSFNNMMQVIFSSPATVAIIVAYFLDCT 480 (526)
Q Consensus 403 ~Gi~~l--~~~~~~~~rn~~ivg~sl~~Gl~~p~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~sgi~~g~i~ai~Ln~~ 480 (526)
+|+|++ +++|++++||.+|+++++.+|++... +| ++.+..||+++|+++|++||++
T Consensus 348 ~Gi~~l~~~~v~~~~~rn~~i~~~~l~~G~g~~~--------------------~~--~~~~~~~gi~~~~~~ai~ln~~ 405 (429)
T 3qe7_A 348 SGIRVLIESKVDYNKAQNLILTSVILIIGVSGAK--------------------VN--IGAAELKGMALATIVGIGLSLI 405 (429)
T ss_dssp HHHHHHHHTTSCTTSHHHHHHHHHHHHHHHHCCC--------------------CC--SSSCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHH--------------------Hh--hhhhccCcHHHHHHHHHHHHHH
Confidence 999999 99999988999999999999997421 11 2346789999999999999999
Q ss_pred cCCCCCCcccccc
Q 037190 481 HSLGHSATRQDCG 493 (526)
Q Consensus 481 ~~~~~~~~~~~~g 493 (526)
+|++++.+++|-.
T Consensus 406 l~~~~~~~~~~~~ 418 (429)
T 3qe7_A 406 FKLISVLRPEEVV 418 (429)
T ss_dssp HTCCC--------
T ss_pred hcCccccCCcceE
Confidence 9976655544444
No 2
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli}
Probab=68.90 E-value=14 Score=38.61 Aligned_cols=76 Identities=18% Similarity=0.093 Sum_probs=47.3
Q ss_pred cceehhhhhhhHhhhcCCCCCCccccchhhh----hhhccCCCc----hHHHHHHHHHHHHHHh-hHH--HHHHHhCCHH
Q 037190 319 RGIGWQGLGLLLDGAFGTGSGCAASVENAGL----LGLTRNGSR----RVVQISAGFMLFFSVL-GKF--GAILASIPLP 387 (526)
Q Consensus 319 r~l~~dGl~~ilaglfG~~p~~t~s~~n~g~----i~~Tgv~SR----~~~~~~g~~lillgl~-pk~--~~li~~IP~~ 387 (526)
.++...|+++++-++++..+.-...+.|... ....+ .+- -+.+.+|++.++++++ .|+ ..+...+|..
T Consensus 45 ~~l~~agi~Tllq~~~~~~~lP~~~G~sfafi~~~~~i~~-~g~~~~~gavi~aGli~ill~~~~~~~g~~~l~~~~Ppv 123 (429)
T 3qe7_A 45 TVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLLP-LGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPA 123 (429)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCCCCEEECGGGHHHHHHHGG-GCHHHHHHHHHHHHHHHHHHHHHHHTTCSHHHHHHCCHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCCeEecChHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCCe
Confidence 6788888888888887544431112233333 11122 221 1467788888888876 233 3799999988
Q ss_pred HHHHHHHH
Q 037190 388 IVAALYCV 395 (526)
Q Consensus 388 Vlggvli~ 395 (526)
|+|.+...
T Consensus 124 viG~~i~~ 131 (429)
T 3qe7_A 124 AMGAIVAV 131 (429)
T ss_dssp HHHHHHHH
T ss_pred eeHHHHHH
Confidence 88876543
No 3
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*
Probab=38.82 E-value=2.9e+02 Score=26.97 Aligned_cols=100 Identities=7% Similarity=-0.081 Sum_probs=53.9
Q ss_pred HHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHH----hcCCcceEEecchhHHHHHHHHHhccCcccCCCcchhhhh
Q 037190 51 IPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQTS----FGTRLPVVMGGSYAFNITSISIAASNRFNIYTDPEQRFKE 126 (526)
Q Consensus 51 ~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~----~G~rlPiv~G~Sf~~l~~~~~i~~~~~~~~~~~~~~~~~~ 126 (526)
.|. +.+..|+++.+...+.+...+...++.++-.. +|.|..++.+.....++......... ..
T Consensus 49 ~~~-~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~------------~~ 115 (438)
T 3o7q_A 49 LPQ-FQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAE------------IM 115 (438)
T ss_dssp HHH-HHHHSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHH------------TT
T ss_pred HHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHHHHHHhccc------------cc
Confidence 344 34558999998888888777777888888765 56666555443332222221100000 01
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhCchhHH
Q 037190 127 SMKTMQGALIMASLFNMLIGFFGFGTIFGRFLNPLAAV 164 (526)
Q Consensus 127 ~~~~~~ga~lvaGli~~llg~~g~~~~l~~~~pp~V~G 164 (526)
.+..+..+.++.|+..-..-.. ....+.+.+|+.--+
T Consensus 116 ~~~~l~~~~~l~G~~~~~~~~~-~~~~~~~~~~~~~r~ 152 (438)
T 3o7q_A 116 NYTLFLVGLFIIAAGLGCLETA-ANPFVTVLGPESSGH 152 (438)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHHHHHSSCSTTHH
T ss_pred cHHHHHHHHHHHHhhHHHhhhh-HHHHHHHHcCchhHH
Confidence 3444555555556554433222 235566777764433
No 4
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*
Probab=29.11 E-value=1.1e+02 Score=30.15 Aligned_cols=60 Identities=12% Similarity=-0.019 Sum_probs=31.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhhHHHH-HhhhcCCChHHHHHHHHHHHHHHHHHHHHHHH
Q 037190 27 SPPWSEAMILGFQHYLVMLGTTVIIPTT-LVPLMGGGNVEKAQVINTSLFVAGINTLLQTS 86 (526)
Q Consensus 27 ~pp~~~~~~~GlQh~l~m~~~~i~~Pli-i~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~ 86 (526)
++.........+-............|.. +.+..|.++.+...+.....++..++.++-.+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~ 317 (438)
T 3o7q_A 257 IRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTW 317 (438)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444443333333333333345666 66667999887666555555555555555443
No 5
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1
Probab=27.78 E-value=4.3e+02 Score=25.68 Aligned_cols=39 Identities=15% Similarity=-0.140 Sum_probs=25.3
Q ss_pred HhhHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHH
Q 037190 48 TVIIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQTS 86 (526)
Q Consensus 48 ~i~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~ 86 (526)
....|..+.+..|+++.+...+.....++..++.++-..
T Consensus 272 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~ 310 (451)
T 1pw4_A 272 LDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGW 310 (451)
T ss_dssp HHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344577776668999887766665555555666666554
No 6
>2k9u_B Filamin-binding LIM protein 1; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=26.02 E-value=26 Score=21.35 Aligned_cols=13 Identities=46% Similarity=0.611 Sum_probs=10.2
Q ss_pred CCCCCCCCCCCCc
Q 037190 1 MASKPDECQPHPV 13 (526)
Q Consensus 1 ~~~~~~~~~~~~~ 13 (526)
||+||||+..++.
T Consensus 1 ma~kpeKR~aSSv 13 (26)
T 2k9u_B 1 MASKPEKRVASSV 13 (26)
T ss_dssp CCCCSSSSCEEEE
T ss_pred CCCcchhheeeeE
Confidence 7899999887654
No 7
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1
Probab=19.56 E-value=2.7e+02 Score=27.26 Aligned_cols=61 Identities=10% Similarity=-0.003 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHH---hhHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHH----hcCCcce
Q 037190 31 SEAMILGFQHYLVMLGTT---VIIPTTLVPLMGGGNVEKAQVINTSLFVAGINTLLQTS----FGTRLPV 93 (526)
Q Consensus 31 ~~~~~~GlQh~l~m~~~~---i~~Plii~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~----~G~rlPi 93 (526)
.......+.+++..+... ...|.+..+ . .++.+...+.+...+...++.++-.. +|.|..+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l 95 (451)
T 1pw4_A 28 QIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-G-FSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL 95 (451)
T ss_dssp HHHHHHHHHHHHHHHHHTSHHHHHHHTTSS-T-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-ccHhHHHHHHHHHHHHHHHHHHhHHHHHHhcCchHHH
Confidence 344455555555444322 223444333 5 78877777777777777777777664 4544433
No 8
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}
Probab=18.14 E-value=5.8e+02 Score=25.23 Aligned_cols=47 Identities=15% Similarity=0.109 Sum_probs=33.4
Q ss_pred hHHHHHhhh-----cCCChHHHHHHHHHHHHHHHHHHHHHHH-----hcCCcceEEe
Q 037190 50 IIPTTLVPL-----MGGGNVEKAQVINTSLFVAGINTLLQTS-----FGTRLPVVMG 96 (526)
Q Consensus 50 ~~Plii~~a-----~gl~~~~~~~li~~~l~~sGi~Tllq~~-----~G~rlPiv~G 96 (526)
..|..+.+. .|+++.+...+.+...++..++.++-+. +|.|..+..+
T Consensus 35 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r~~~~~~ 91 (491)
T 4aps_A 35 ILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGTIGGFVADRIIGARPAVFWG 91 (491)
T ss_dssp HHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHhccchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHH
Confidence 345555555 8999999888888888888888888774 4555544443
No 9
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}
Probab=11.76 E-value=72 Score=30.93 Aligned_cols=16 Identities=6% Similarity=0.125 Sum_probs=7.0
Q ss_pred HHHHhhhcCCChHHHH
Q 037190 52 PTTLVPLMGGGNVEKA 67 (526)
Q Consensus 52 Plii~~a~gl~~~~~~ 67 (526)
|..+.+..|.|+.+..
T Consensus 223 ~~~~~~~~g~~~~~~g 238 (375)
T 2gfp_A 223 GVLMGAVLGLSSMTVS 238 (375)
T ss_dssp SCSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHH
Confidence 3333333455554433
No 10
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}
Probab=8.57 E-value=1.2e+03 Score=21.82 Aligned_cols=41 Identities=17% Similarity=0.272 Sum_probs=28.9
Q ss_pred hhhcCCChHHHHHHHHHHHHHHHHHHHHHHH----hcCCcceEEe
Q 037190 56 VPLMGGGNVEKAQVINTSLFVAGINTLLQTS----FGTRLPVVMG 96 (526)
Q Consensus 56 ~~a~gl~~~~~~~li~~~l~~sGi~Tllq~~----~G~rlPiv~G 96 (526)
.+..|.++++.........+...++.++-.. +|.|..+..+
T Consensus 27 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 71 (375)
T 2gfp_A 27 ARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVG 71 (375)
T ss_dssp HTTSSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTTSCCCCCCHHH
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHH
Confidence 4458999988887777777777777777765 5666555433
Done!