Query 037193
Match_columns 157
No_of_seqs 130 out of 709
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 16:19:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037193.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037193hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jon_A Beta-1,3-glucanase; oli 100.0 2.4E-34 8.2E-39 213.2 10.8 84 72-157 9-93 (101)
2 2w61_A GAS2P, glycolipid-ancho 99.9 4.6E-27 1.6E-31 214.1 8.8 101 55-157 366-488 (555)
3 2gsv_A Hypothetical protein YV 16.5 54 0.0018 22.7 1.3 9 124-132 28-36 (80)
4 3gwl_A P14, FAD-linked sulfhyd 12.2 71 0.0024 22.6 1.0 17 13-29 13-29 (106)
5 2wfu_B Probable insulin-like p 12.0 1.3E+02 0.0046 16.6 1.9 15 85-99 7-21 (26)
6 4e0h_A Mitochondrial FAD-linke 11.4 98 0.0033 21.6 1.5 17 12-28 12-28 (106)
7 3u5s_A FAD-linked sulfhydryl o 10.3 1.1E+02 0.0038 22.2 1.5 18 11-28 27-44 (126)
8 3gwn_A Probable FAD-linked sul 9.9 98 0.0034 22.0 1.1 17 12-28 14-30 (114)
9 1jr8_A ERV2 protein, mitochond 8.8 1.1E+02 0.0039 21.9 1.1 17 12-28 16-32 (117)
10 2hj3_A Sulfhydryl oxidase ERV1 7.6 1.3E+02 0.0045 21.8 1.0 17 12-28 18-34 (125)
No 1
>2jon_A Beta-1,3-glucanase; olive pollen, allergen; NMR {Olea europaea}
Probab=100.00 E-value=2.4e-34 Score=213.18 Aligned_cols=84 Identities=36% Similarity=0.711 Sum_probs=80.8
Q ss_pred CCCcceeeCCCCCHHHHHHHHHhhhcCCCCCccccCCCccccCCC-ChhhhHhHHHHHHHHHcCCCCCCCCCCCceEEec
Q 037193 72 PGKKYCVPKENLSEVTLKEQIEWGCMQGVDCDPVVNMKEISCADQ-SWYVKAAYVMNYYFNAHGRDEASCYFNNNAMLTY 150 (157)
Q Consensus 72 p~~lwCVak~~a~~~~Lq~~ldyACg~gvDCs~I~~gGt~gCysp-t~~~haSyAfN~YYq~~~~~~~aCdF~G~A~ltt 150 (157)
.+++|||+|+++++++||++||||||+|+||++|++|| .||+| ++++|+|||||+|||++++..++|||+|+|+|++
T Consensus 9 ~~~~wCVak~~~~~~~l~~~ldyACg~gaDC~~I~~gg--~Cy~p~t~~~haSyAfN~YYq~~~~~~~aCdF~G~A~it~ 86 (101)
T 2jon_A 9 AAGSWCVPKPGVSDDQLTGNINYACSQGIDCGPIQPGG--ACFEPNTVKAHAAYVMNLYYQHAGRNSWNCDFSQTATLTN 86 (101)
T ss_dssp CCSCEEEECTTSCHHHHHHHHHHHTTTSSSSSTTCCCS--SSCSSCCTTHHHHHHHHHHHHHHTSSGGGCCSCSSEEEES
T ss_pred CCCcEEEECCCCCHHHHHHHHHHHcCCCCCccccCcCC--cccCCCCHHHHHHHHHHHHHHHcCCCCCccCCCCeEEEee
Confidence 36799999999999999999999999988999999999 89999 9999999999999999999999999999999999
Q ss_pred cCCCCCC
Q 037193 151 DNPTTTY 157 (157)
Q Consensus 151 ~DPS~g~ 157 (157)
.|||+|+
T Consensus 87 ~dPS~g~ 93 (101)
T 2jon_A 87 TNPSYGA 93 (101)
T ss_dssp SCCCCSS
T ss_pred cCCCCCc
Confidence 9999874
No 2
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A*
Probab=99.94 E-value=4.6e-27 Score=214.07 Aligned_cols=101 Identities=14% Similarity=0.191 Sum_probs=92.9
Q ss_pred Cccee-cc-cccccCCCCCCC---------CcceeeCCC-CCHHHHHHHHHhhhcCCCCCccccCCCc---cccCCC-Ch
Q 037193 55 QHKIF-KK-RKASAAFAVIPG---------KKYCVPKEN-LSEVTLKEQIEWGCMQGVDCDPVVNMKE---ISCADQ-SW 118 (157)
Q Consensus 55 ~~~~~-~~-w~As~~lPptp~---------~lwCVak~~-a~~~~Lq~~ldyACg~gvDCs~I~~gGt---~gCysp-t~ 118 (157)
.||.. .. |.++..|||+|+ .+|||++++ +++++||++||||||+ +||++|++||+ ||||+| ++
T Consensus 366 ~cp~~~~~~~~~~~~lp~~p~~~~c~~~~~~~~Cv~~~~~~~~~~l~~~~~yaC~~-~dC~~I~~~g~~g~yG~~~~~~~ 444 (555)
T 2w61_A 366 ECPHIAVGVWEANEKLPETPDRSKCACLDEILPCEIVPFGAESGKYEEYFSYLCSK-VDCSDILANGKTGEYGEFSDCSV 444 (555)
T ss_dssp CCCCCBTTTBCCCSSCCCCCCHHHHHHHHHHCSEEECCTTCCGGGHHHHHHHHTTT-SCGGGGCEETTTTEECTTTTSCH
T ss_pred CCCCCCCCcccccccCCCCCCcccccccccCCeeecCCCCCCHHHHHHHHHHHhCc-CCCccccCCCcCCCccccCCCCH
Confidence 48866 34 999888998876 389999999 9999999999999999 89999999998 889999 99
Q ss_pred hhhHhHHHHHHHHHcCCCCCCCCCCCc------eEEeccCCCCCC
Q 037193 119 YVKAAYVMNYYFNAHGRDEASCYFNNN------AMLTYDNPTTTY 157 (157)
Q Consensus 119 ~~haSyAfN~YYq~~~~~~~aCdF~G~------A~ltt~DPS~g~ 157 (157)
++|||||||+|||++++..++|||+|+ |+++ +|||+|+
T Consensus 445 ~~~~Sya~n~yyq~~~~~~~~C~F~g~~~~~~~a~~~-~~~s~~~ 488 (555)
T 2w61_A 445 EQKLSLQLSKLYCKIGANDRHCPLNDKNVYFNLESLQ-PLTSESI 488 (555)
T ss_dssp HHHHHHHHHHHHHHHCCCSSCCSCCCTTEEECGGGGS-CCCTTCT
T ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCCCcccccceEEE-eCCCCCc
Confidence 999999999999999999999999999 9999 8899874
No 3
>2gsv_A Hypothetical protein YVFG; alpha-helical protein, structural genomics, PSI, protein structure initiative; 1.90A {Bacillus subtilis} SCOP: a.23.7.1 PDB: 2js1_A
Probab=16.54 E-value=54 Score=22.67 Aligned_cols=9 Identities=33% Similarity=0.681 Sum_probs=7.6
Q ss_pred HHHHHHHHH
Q 037193 124 YVMNYYFNA 132 (157)
Q Consensus 124 yAfN~YYq~ 132 (157)
-|||+||..
T Consensus 28 hAmNaYYrs 36 (80)
T 2gsv_A 28 HAMNSYYRS 36 (80)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 589999975
No 4
>3gwl_A P14, FAD-linked sulfhydryl oxidase; homodimer, five-helix bundle, cytoplasm, disulfide bond, flavoprotein, late protein; HET: FAD; 2.10A {African swine fever virus BA71V}
Probab=12.16 E-value=71 Score=22.56 Aligned_cols=17 Identities=47% Similarity=0.581 Sum_probs=14.5
Q ss_pred HHHHhhhccccCCCCcc
Q 037193 13 FLLHLTAVSYSDVPSSQ 29 (157)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ 29 (157)
.|||..|+.|.|-|+.+
T Consensus 13 ~llHt~aa~yP~~Pt~~ 29 (106)
T 3gwl_A 13 RSLHLYAIFFSDAPSWK 29 (106)
T ss_dssp HHHHHHHHHSCSSCCHH
T ss_pred HHHHHHHhhCCCCCCHH
Confidence 68999999999998653
No 5
>2wfu_B Probable insulin-like peptide 5 B chain; cleavage on PAIR of basic residues, signaling protein; 1.85A {Drosophila melanogaster} PDB: 2wfv_B
Probab=11.99 E-value=1.3e+02 Score=16.60 Aligned_cols=15 Identities=20% Similarity=0.441 Sum_probs=12.2
Q ss_pred HHHHHHHHHhhhcCC
Q 037193 85 EVTLKEQIEWGCMQG 99 (157)
Q Consensus 85 ~~~Lq~~ldyACg~g 99 (157)
...|-++|..+|+.|
T Consensus 7 G~~L~eaL~~vC~~G 21 (26)
T 2wfu_B 7 GPALMDMLRVACPNG 21 (26)
T ss_dssp HHHHHHHHHHHCSSC
T ss_pred hHHHHHHHHHHHhcc
Confidence 467889999999864
No 6
>4e0h_A Mitochondrial FAD-linked sulfhydryl oxidase ERV1; four-helix bundle, flavin-linked sulfhydryl oxidase, FAD BIN oxidation; HET: FAD; 2.00A {Saccharomyces cerevisiae}
Probab=11.45 E-value=98 Score=21.58 Aligned_cols=17 Identities=41% Similarity=0.528 Sum_probs=14.4
Q ss_pred HHHHHhhhccccCCCCc
Q 037193 12 TFLLHLTAVSYSDVPSS 28 (157)
Q Consensus 12 ~~~~~~~~~~~~~~~~~ 28 (157)
-++||..|+.|.+-|+.
T Consensus 12 W~~lHtia~~yP~~pt~ 28 (106)
T 4e0h_A 12 WTLLHSVAASYPAQPTD 28 (106)
T ss_dssp HHHHHHHHHTSCSSCCH
T ss_pred HHHHHHHHhhCCCCCCH
Confidence 47899999999988864
No 7
>3u5s_A FAD-linked sulfhydryl oxidase ALR; flavin, liver, oxidoreductase; HET: FAD; 1.50A {Homo sapiens} PDB: 3mbg_A* 3tk0_A* 3o55_A* 3u2m_A* 3u2l_A* 3r7c_A* 1oqc_A*
Probab=10.30 E-value=1.1e+02 Score=22.22 Aligned_cols=18 Identities=33% Similarity=0.543 Sum_probs=15.0
Q ss_pred HHHHHHhhhccccCCCCc
Q 037193 11 ATFLLHLTAVSYSDVPSS 28 (157)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~ 28 (157)
.-+|||..|..|.+-|+.
T Consensus 27 tW~~LHtia~~yP~~Pt~ 44 (126)
T 3u5s_A 27 SWAVLHTLAAYYPDLPTP 44 (126)
T ss_dssp HHHHHHHHHHTSCSSCCH
T ss_pred HHHHHHHHHhhCCCCCCH
Confidence 347899999999998864
No 8
>3gwn_A Probable FAD-linked sulfhydryl oxidase R596; five helix bundle, homodimer, disulfide bond, flavoprot oxidoreductase, virion; HET: FAD; 1.78A {Acanthamoeba polyphaga mimivirus}
Probab=9.89 E-value=98 Score=22.04 Aligned_cols=17 Identities=24% Similarity=0.247 Sum_probs=14.2
Q ss_pred HHHHHhhhccccCCCCc
Q 037193 12 TFLLHLTAVSYSDVPSS 28 (157)
Q Consensus 12 ~~~~~~~~~~~~~~~~~ 28 (157)
-.|||..++.|.|-|+.
T Consensus 14 W~llHt~aa~~p~~pt~ 30 (114)
T 3gwn_A 14 WTFNHAVTFGYPLNPTS 30 (114)
T ss_dssp HHHHHHHHHTSCSSCCH
T ss_pred HHHHHHHHHhCCCCCCH
Confidence 36899999999998764
No 9
>1jr8_A ERV2 protein, mitochondrial; FAD, sulfhydryl oxidase, helical bundle, CXXC, oxidoreductase; HET: FAD; 1.50A {Saccharomyces cerevisiae} SCOP: a.24.15.1 PDB: 1jra_A*
Probab=8.80 E-value=1.1e+02 Score=21.86 Aligned_cols=17 Identities=18% Similarity=0.298 Sum_probs=13.9
Q ss_pred HHHHHhhhccccCCCCc
Q 037193 12 TFLLHLTAVSYSDVPSS 28 (157)
Q Consensus 12 ~~~~~~~~~~~~~~~~~ 28 (157)
-.|||..++.|.+-|+.
T Consensus 16 W~llHtlaa~~p~~pt~ 32 (117)
T 1jr8_A 16 WKYFHTLLARFPDEPTP 32 (117)
T ss_dssp HHHHHHHHHTSCSSCCH
T ss_pred HHHHHHHHHhccccCCH
Confidence 36899999999988753
No 10
>2hj3_A Sulfhydryl oxidase ERV1P; four-helix bundle, flavin adenine dinucleotide, oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana}
Probab=7.61 E-value=1.3e+02 Score=21.81 Aligned_cols=17 Identities=29% Similarity=0.481 Sum_probs=14.0
Q ss_pred HHHHHhhhccccCCCCc
Q 037193 12 TFLLHLTAVSYSDVPSS 28 (157)
Q Consensus 12 ~~~~~~~~~~~~~~~~~ 28 (157)
-.|||..++.|.+-|+.
T Consensus 18 W~llHtlaa~yp~~pt~ 34 (125)
T 2hj3_A 18 WTFLHTLAAQYPEKPTR 34 (125)
T ss_dssp HHHHHHHHHHSCSSCCH
T ss_pred hHHHHHHHhhCcCCCCH
Confidence 36899999999888775
Done!