Query 037197
Match_columns 1009
No_of_seqs 1060 out of 6458
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 16:24:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037197.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037197hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 4.8E-88 1.6E-92 840.9 40.8 598 12-619 5-753 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.5E-66 5.3E-71 647.4 32.6 515 67-585 127-743 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 2.6E-61 9E-66 595.0 41.1 556 55-610 4-626 (680)
4 3t6q_A CD180 antigen; protein- 100.0 5.5E-59 1.9E-63 566.5 34.9 494 91-587 34-564 (606)
5 1ziw_A TOLL-like receptor 3; i 100.0 2.1E-58 7E-63 569.2 40.4 523 66-588 49-627 (680)
6 3j0a_A TOLL-like receptor 5; m 100.0 1.8E-58 6E-63 580.8 34.4 518 55-587 14-564 (844)
7 4eco_A Uncharacterized protein 100.0 1.4E-59 4.8E-64 571.3 23.4 484 14-560 25-601 (636)
8 4ecn_A Leucine-rich repeat pro 100.0 7E-58 2.4E-62 563.9 28.3 511 13-559 263-864 (876)
9 3t6q_A CD180 antigen; protein- 100.0 1.9E-57 6.6E-62 552.9 31.7 504 57-563 14-564 (606)
10 3j0a_A TOLL-like receptor 5; m 100.0 1.5E-56 5E-61 563.4 40.4 525 70-611 8-565 (844)
11 3vq2_A TLR4, TOLL-like recepto 100.0 2.2E-57 7.5E-62 552.4 31.5 512 66-588 32-563 (606)
12 3vq2_A TLR4, TOLL-like recepto 100.0 9E-56 3.1E-60 538.2 30.0 487 66-563 56-562 (606)
13 2z63_A TOLL-like receptor 4, v 100.0 1.1E-52 3.9E-57 507.2 26.8 492 90-590 28-538 (570)
14 2z81_A CD282 antigen, TOLL-lik 100.0 1.1E-51 3.6E-56 496.2 26.0 493 54-589 3-516 (549)
15 4eco_A Uncharacterized protein 100.0 8.5E-52 2.9E-56 502.8 22.1 451 114-584 81-601 (636)
16 2z63_A TOLL-like receptor 4, v 100.0 1E-50 3.4E-55 490.3 30.9 490 66-564 28-536 (570)
17 2z81_A CD282 antigen, TOLL-lik 100.0 1.3E-50 4.6E-55 486.6 21.4 478 95-610 10-514 (549)
18 3omv_A RAF proto-oncogene seri 100.0 3.3E-49 1.1E-53 428.9 23.5 259 698-979 36-299 (307)
19 4b9d_A Serine/threonine-protei 100.0 1.8E-49 6.1E-54 436.8 20.3 253 698-973 24-276 (350)
20 4ecn_A Leucine-rich repeat pro 100.0 2.7E-49 9.3E-54 487.5 23.6 463 90-583 323-864 (876)
21 2z7x_B TOLL-like receptor 1, v 100.0 1.2E-49 4.1E-54 474.8 19.2 458 93-588 3-486 (520)
22 4asz_A BDNF/NT-3 growth factor 100.0 2E-49 6.8E-54 431.0 17.9 259 698-979 13-288 (299)
23 4aoj_A High affinity nerve gro 100.0 9.9E-49 3.4E-53 431.6 22.8 258 699-979 42-318 (329)
24 4fih_A Serine/threonine-protei 100.0 6.2E-49 2.1E-53 431.8 20.9 250 698-973 74-323 (346)
25 4gt4_A Tyrosine-protein kinase 100.0 4.8E-49 1.6E-53 429.9 19.8 258 699-978 27-304 (308)
26 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.8E-49 6.1E-54 429.4 15.9 249 698-972 32-283 (311)
27 4g3f_A NF-kappa-beta-inducing 100.0 6.9E-49 2.4E-53 430.2 20.4 265 698-1002 58-328 (336)
28 2z7x_B TOLL-like receptor 1, v 100.0 5.5E-49 1.9E-53 469.1 18.8 455 69-563 3-485 (520)
29 4g8a_A TOLL-like receptor 4; l 100.0 2.1E-47 7.2E-52 467.5 33.2 510 68-586 54-583 (635)
30 3fpq_A Serine/threonine-protei 100.0 4.8E-48 1.6E-52 416.7 22.8 249 701-973 29-282 (290)
31 3hyh_A Carbon catabolite-derep 100.0 3.9E-48 1.3E-52 413.5 20.0 249 697-973 12-262 (275)
32 4fie_A Serine/threonine-protei 100.0 8.3E-48 2.8E-52 433.3 22.0 251 697-973 150-400 (423)
33 3hmm_A TGF-beta receptor type- 100.0 3.3E-47 1.1E-51 416.9 21.0 265 698-981 3-298 (303)
34 3ubd_A Ribosomal protein S6 ki 100.0 4.2E-48 1.4E-52 419.1 13.4 245 698-968 24-271 (304)
35 4g8a_A TOLL-like receptor 4; l 100.0 4.4E-46 1.5E-50 455.8 29.9 527 72-610 37-584 (635)
36 4ase_A Vascular endothelial gr 100.0 2.8E-47 9.6E-52 423.2 16.7 263 697-980 63-347 (353)
37 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.5E-46 1.2E-50 448.7 21.5 458 93-588 34-515 (562)
38 4g31_A Eukaryotic translation 100.0 1.1E-45 3.9E-50 402.3 22.9 252 697-973 4-279 (299)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 6.7E-45 2.3E-49 437.5 23.0 453 69-563 34-514 (562)
40 4b99_A Mitogen-activated prote 100.0 9.1E-44 3.1E-48 402.2 23.4 263 698-973 54-344 (398)
41 1ogq_A PGIP-2, polygalacturona 100.0 1.8E-44 6.2E-49 399.2 17.1 295 15-320 2-306 (313)
42 1jl5_A Outer protein YOPM; leu 100.0 7.4E-44 2.5E-48 414.0 18.6 421 88-587 9-433 (454)
43 1jl5_A Outer protein YOPM; leu 100.0 2.4E-42 8.1E-47 401.3 27.4 424 66-569 11-439 (454)
44 3v47_A TOLL-like receptor 5B a 100.0 7.8E-43 2.7E-47 408.7 22.9 394 165-592 13-417 (455)
45 3v47_A TOLL-like receptor 5B a 100.0 5.1E-42 1.8E-46 401.8 25.8 385 118-564 14-413 (455)
46 4f9c_A Cell division cycle 7-r 100.0 2.9E-42 9.8E-47 386.0 22.3 198 695-906 18-249 (361)
47 3uto_A Twitchin; kinase, muscl 100.0 1.2E-41 4.1E-46 404.3 24.9 254 696-973 155-410 (573)
48 3v5w_A G-protein coupled recep 100.0 4.9E-42 1.7E-46 402.7 21.2 250 698-972 189-448 (689)
49 2qkw_B Protein kinase; three-h 100.0 2.3E-40 7.7E-45 368.7 23.1 278 694-980 35-315 (321)
50 3fxz_A Serine/threonine-protei 100.0 2.1E-40 7.1E-45 364.2 22.1 252 696-973 18-269 (297)
51 3uim_A Brassinosteroid insensi 100.0 1.5E-40 5E-45 371.2 20.3 286 694-984 26-315 (326)
52 3p86_A Serine/threonine-protei 100.0 2.1E-40 7.2E-45 366.0 20.9 263 697-982 36-300 (309)
53 3bz5_A Internalin-J, INLJ; leu 100.0 7.1E-40 2.4E-44 380.8 25.7 374 116-589 20-393 (457)
54 3fe3_A MAP/microtubule affinit 100.0 3.1E-40 1.1E-44 367.2 20.5 250 697-973 14-264 (328)
55 3bz5_A Internalin-J, INLJ; leu 100.0 3.9E-40 1.3E-44 383.1 22.1 370 99-568 27-396 (457)
56 3s95_A LIMK-1, LIM domain kina 100.0 1.4E-39 4.8E-44 360.4 24.2 259 698-980 10-282 (310)
57 3soa_A Calcium/calmodulin-depe 100.0 1.5E-39 5E-44 375.7 25.2 258 694-973 7-267 (444)
58 3zgw_A Maternal embryonic leuc 100.0 3.9E-40 1.3E-44 368.4 19.5 253 694-973 6-260 (347)
59 2yab_A Death-associated protei 100.0 1.9E-39 6.5E-44 365.1 23.7 256 695-973 9-272 (361)
60 4eqm_A Protein kinase; transfe 100.0 1.8E-39 6.1E-44 356.3 21.8 267 697-984 10-279 (294)
61 1tki_A Titin; serine kinase, m 100.0 2E-39 6.9E-44 360.1 22.3 252 697-973 4-257 (321)
62 1o6l_A RAC-beta serine/threoni 100.0 2.2E-39 7.5E-44 361.3 21.9 250 698-973 5-260 (337)
63 2bdw_A Hypothetical protein K1 100.0 3.9E-39 1.4E-43 363.7 24.0 257 694-973 25-284 (362)
64 2y0a_A Death-associated protei 100.0 5E-39 1.7E-43 358.1 24.0 257 694-973 7-271 (326)
65 3c0i_A Peripheral plasma membr 100.0 2.1E-39 7.1E-44 365.0 20.4 259 696-973 22-286 (351)
66 3niz_A Rhodanese family protei 100.0 5.8E-39 2E-43 355.2 23.5 266 694-972 17-299 (311)
67 3sxs_A Cytoplasmic tyrosine-pr 100.0 7.4E-39 2.5E-43 346.7 23.2 258 698-983 8-267 (268)
68 3o0g_A Cell division protein k 100.0 1.1E-38 3.8E-43 349.9 24.2 265 698-973 2-282 (292)
69 3kul_A Ephrin type-A receptor 100.0 3E-39 1E-43 359.7 19.7 261 697-982 48-315 (325)
70 2c30_A Serine/threonine-protei 100.0 1E-38 3.6E-43 354.7 23.9 249 699-973 46-294 (321)
71 3soc_A Activin receptor type-2 100.0 2.4E-39 8E-44 360.3 18.5 267 698-981 24-319 (322)
72 2zv2_A Calcium/calmodulin-depe 100.0 6.7E-39 2.3E-43 352.8 21.9 252 697-973 12-292 (298)
73 4dc2_A Protein kinase C IOTA t 100.0 4.4E-39 1.5E-43 365.2 20.4 252 697-968 51-307 (396)
74 2psq_A Fibroblast growth facto 100.0 4.3E-39 1.5E-43 364.8 20.0 261 698-980 81-364 (370)
75 3cbl_A C-FES, proto-oncogene t 100.0 1.2E-39 4.1E-44 370.7 15.2 260 698-982 114-376 (377)
76 2nru_A Interleukin-1 receptor- 100.0 2.4E-38 8.3E-43 350.0 25.2 276 694-980 21-306 (307)
77 4euu_A Serine/threonine-protei 100.0 2.6E-38 8.9E-43 351.7 25.1 278 697-982 8-311 (319)
78 1kob_A Twitchin; kinase, intra 100.0 2E-38 6.7E-43 360.1 24.2 255 695-973 48-304 (387)
79 1o6v_A Internalin A; bacterial 100.0 3.4E-38 1.2E-42 369.8 27.0 345 185-584 45-389 (466)
80 3a8x_A Protein kinase C IOTA t 100.0 1.2E-38 4.2E-43 356.9 22.1 251 698-968 9-264 (345)
81 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.1E-39 7.1E-44 363.9 15.6 251 697-973 22-280 (353)
82 2qol_A Ephrin receptor; recept 100.0 5.5E-39 1.9E-43 364.1 18.9 261 697-982 44-311 (373)
83 3tki_A Serine/threonine-protei 100.0 1.1E-38 3.6E-43 354.8 20.9 254 697-974 6-262 (323)
84 1ob3_A PFPK5, cell division co 100.0 9.7E-39 3.3E-43 349.6 19.9 263 698-973 2-280 (288)
85 1o6v_A Internalin A; bacterial 100.0 8.6E-38 3E-42 366.3 29.1 348 87-465 43-390 (466)
86 3lb7_A RAF proto-oncogene seri 100.0 4.2E-38 1.4E-42 347.4 24.6 262 697-981 35-301 (307)
87 2izr_A Casein kinase I isoform 100.0 1.2E-38 4.1E-43 356.2 20.4 262 698-982 9-283 (330)
88 3q4u_A Activin receptor type-1 100.0 2.9E-38 1E-42 348.3 23.2 261 696-978 6-300 (301)
89 4hcu_A Tyrosine-protein kinase 100.0 1.2E-38 4.1E-43 345.2 19.4 256 698-981 10-267 (269)
90 2pmi_A Negative RE, cyclin-dep 100.0 1.4E-38 4.8E-43 353.2 20.3 267 697-973 4-293 (317)
91 4f0f_A Serine/threonine-protei 100.0 5.2E-38 1.8E-42 343.7 24.1 255 698-978 19-287 (287)
92 3qd2_B Eukaryotic translation 100.0 3.5E-38 1.2E-42 352.8 23.2 254 695-973 3-325 (332)
93 2wqm_A Serine/threonine-protei 100.0 2.1E-38 7.1E-43 351.0 20.8 271 697-985 31-302 (310)
94 2ivs_A Proto-oncogene tyrosine 100.0 9.4E-39 3.2E-43 354.5 18.0 264 697-982 22-313 (314)
95 3ugc_A Tyrosine-protein kinase 100.0 8.1E-39 2.8E-43 351.6 17.3 264 697-980 9-291 (295)
96 4agu_A Cyclin-dependent kinase 100.0 2.8E-38 9.6E-43 350.2 21.7 268 697-973 2-284 (311)
97 1xjd_A Protein kinase C, theta 100.0 5.3E-39 1.8E-43 359.2 15.9 250 697-972 16-268 (345)
98 2id5_A Lingo-1, leucine rich r 100.0 3E-38 1E-42 372.0 23.1 348 237-611 14-361 (477)
99 3kk8_A Calcium/calmodulin depe 100.0 5.2E-38 1.8E-42 343.1 23.3 255 696-973 4-261 (284)
100 3p1a_A MYT1 kinase, membrane-a 100.0 3.9E-38 1.3E-42 348.6 22.4 249 696-973 55-304 (311)
101 1fot_A TPK1 delta, CAMP-depend 100.0 2.6E-38 8.9E-43 350.1 20.9 247 698-973 6-258 (318)
102 4fr4_A YANK1, serine/threonine 100.0 3.2E-38 1.1E-42 357.0 21.7 253 697-973 14-271 (384)
103 2a2a_A Death-associated protei 100.0 6E-38 2E-42 349.0 23.5 256 695-973 9-272 (321)
104 2qr7_A Ribosomal protein S6 ki 100.0 1.7E-38 5.9E-43 355.3 19.0 254 695-973 19-277 (342)
105 3poz_A Epidermal growth factor 100.0 8.6E-39 2.9E-43 356.6 16.5 259 698-982 15-280 (327)
106 3vhe_A Vascular endothelial gr 100.0 9.6E-39 3.3E-43 361.6 17.0 263 697-980 21-355 (359)
107 3h4j_B AMPK kdaid, SNF1-like p 100.0 4.7E-39 1.6E-43 358.2 14.2 247 697-973 8-258 (336)
108 3hko_A Calcium/calmodulin-depe 100.0 5.7E-38 1.9E-42 353.2 23.2 262 694-973 22-330 (345)
109 3kn6_A Ribosomal protein S6 ki 100.0 2.2E-38 7.6E-43 352.5 19.5 248 703-972 16-269 (325)
110 2i0e_A Protein kinase C-beta I 100.0 1.8E-38 6.3E-43 356.0 18.7 251 697-973 19-276 (353)
111 1luf_A Muscle-specific tyrosin 100.0 2.1E-38 7.2E-43 356.4 19.1 264 697-982 46-337 (343)
112 3ork_A Serine/threonine protei 100.0 1.2E-38 4.2E-43 352.9 16.8 262 696-979 10-280 (311)
113 3gen_A Tyrosine-protein kinase 100.0 3.1E-38 1.1E-42 344.7 19.8 257 697-981 23-281 (283)
114 1csn_A Casein kinase-1; phosph 100.0 7.5E-38 2.6E-42 344.5 22.8 264 697-982 9-285 (298)
115 1rjb_A FL cytokine receptor; k 100.0 1.5E-38 5.1E-43 357.8 17.6 265 697-982 44-336 (344)
116 3v8s_A RHO-associated protein 100.0 1.2E-38 4E-43 363.8 16.8 254 697-973 68-329 (410)
117 3l9p_A Anaplastic lymphoma kin 100.0 1.1E-38 3.9E-43 361.1 16.3 264 697-982 70-347 (367)
118 1rdq_E PKA C-alpha, CAMP-depen 100.0 4.1E-38 1.4E-42 353.2 20.6 248 697-973 40-293 (350)
119 2w4o_A Calcium/calmodulin-depe 100.0 4.8E-38 1.6E-42 353.4 21.1 252 696-973 51-305 (349)
120 2r5t_A Serine/threonine-protei 100.0 2.1E-38 7.3E-43 357.9 18.1 251 698-974 38-290 (373)
121 2h34_A Serine/threonine-protei 100.0 1.2E-37 4E-42 344.6 23.6 265 696-983 32-299 (309)
122 3dls_A PAS domain-containing s 100.0 1.1E-38 3.8E-43 356.4 15.5 248 694-974 20-275 (335)
123 2x4f_A Myosin light chain kina 100.0 7.6E-38 2.6E-42 354.5 22.4 253 702-978 93-349 (373)
124 3cok_A Serine/threonine-protei 100.0 2.2E-38 7.6E-43 344.9 17.2 252 697-973 10-262 (278)
125 3is5_A Calcium-dependent prote 100.0 8.5E-38 2.9E-42 341.5 21.8 257 695-973 19-278 (285)
126 3og7_A AKAP9-BRAF fusion prote 100.0 7.6E-38 2.6E-42 342.7 21.4 261 697-980 23-288 (289)
127 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3.2E-38 1.1E-42 352.3 18.7 265 696-973 32-318 (329)
128 2w5a_A Serine/threonine-protei 100.0 2.3E-38 7.9E-43 345.0 17.1 260 697-977 5-271 (279)
129 3kex_A Receptor tyrosine-prote 100.0 1.7E-38 5.7E-43 354.0 16.2 259 698-982 13-278 (325)
130 3kmu_A ILK, integrin-linked ki 100.0 6E-38 2.1E-42 340.0 19.9 254 698-980 10-270 (271)
131 3a62_A Ribosomal protein S6 ki 100.0 5.7E-38 2E-42 349.7 20.3 251 697-973 16-276 (327)
132 4eut_A Serine/threonine-protei 100.0 4.7E-38 1.6E-42 360.1 20.1 278 697-982 8-311 (396)
133 3qup_A Tyrosine-protein kinase 100.0 1.8E-38 6E-43 353.8 16.0 267 697-984 22-302 (323)
134 3f3z_A Calcium/calmodulin-depe 100.0 1.3E-37 4.3E-42 338.7 22.3 254 694-973 5-261 (277)
135 3oz6_A Mitogen-activated prote 100.0 6.6E-38 2.3E-42 358.3 20.9 204 694-906 5-233 (388)
136 3ttj_A Mitogen-activated prote 100.0 4.6E-38 1.6E-42 366.3 19.3 262 696-973 60-355 (464)
137 2eue_A Carbon catabolite derep 100.0 7.4E-38 2.5E-42 340.2 19.6 249 697-973 12-262 (275)
138 3bhy_A Death-associated protei 100.0 1.5E-37 5E-42 339.4 22.0 264 696-982 3-276 (283)
139 2rku_A Serine/threonine-protei 100.0 1.1E-37 3.8E-42 342.3 21.0 251 697-973 14-265 (294)
140 3uc3_A Serine/threonine-protei 100.0 5.5E-38 1.9E-42 354.4 18.9 253 697-973 19-274 (361)
141 3dtc_A Mitogen-activated prote 100.0 6.5E-38 2.2E-42 339.9 18.5 255 698-978 7-271 (271)
142 3lm5_A Serine/threonine-protei 100.0 2.2E-37 7.4E-42 345.3 23.2 259 694-973 24-287 (327)
143 1mp8_A Focal adhesion kinase 1 100.0 2.7E-38 9.1E-43 344.8 15.3 260 697-982 14-278 (281)
144 3tt0_A Basic fibroblast growth 100.0 7.8E-38 2.7E-42 356.6 19.8 264 697-982 68-354 (382)
145 1opk_A P150, C-ABL, proto-onco 100.0 3.2E-38 1.1E-42 371.3 17.1 259 698-982 220-480 (495)
146 3fdn_A Serine/threonine-protei 100.0 8.8E-38 3E-42 340.4 19.3 249 697-973 8-257 (279)
147 3gni_B Strad alpha; kinase fol 100.0 1.2E-37 4E-42 356.5 21.2 206 697-907 24-240 (389)
148 4ejn_A RAC-alpha serine/threon 100.0 3.4E-38 1.2E-42 367.2 16.8 251 697-973 147-404 (446)
149 2eva_A TAK1 kinase - TAB1 chim 100.0 2.1E-37 7.3E-42 342.0 22.3 257 698-982 8-265 (307)
150 2owb_A Serine/threonine-protei 100.0 1.3E-37 4.5E-42 348.3 20.8 251 697-973 40-291 (335)
151 4e5w_A Tyrosine-protein kinase 100.0 5.4E-38 1.8E-42 346.3 17.3 263 698-979 21-301 (302)
152 4aw2_A Serine/threonine-protei 100.0 6E-38 2.1E-42 360.7 18.4 257 697-973 73-338 (437)
153 4aaa_A Cyclin-dependent kinase 100.0 1.4E-37 4.6E-42 347.7 20.7 268 697-973 24-306 (331)
154 1qcf_A Haematopoetic cell kina 100.0 6.6E-38 2.3E-42 365.3 18.7 257 698-982 188-446 (454)
155 2y94_A 5'-AMP-activated protei 100.0 9.5E-38 3.2E-42 362.7 20.0 249 698-973 16-266 (476)
156 1t46_A HOMO sapiens V-KIT hard 100.0 5.5E-38 1.9E-42 348.2 17.2 263 697-980 22-307 (313)
157 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.2E-37 4.2E-42 365.6 20.9 253 698-968 185-438 (543)
158 2i1m_A Macrophage colony-stimu 100.0 2.6E-38 9E-43 354.0 14.2 264 697-981 45-327 (333)
159 3mtl_A Cell division protein k 100.0 6E-38 2E-42 349.3 16.8 271 698-980 2-290 (324)
160 3lij_A Calcium/calmodulin depe 100.0 3.3E-37 1.1E-41 363.6 24.1 255 695-973 34-291 (494)
161 3lxl_A Tyrosine-protein kinase 100.0 7.5E-38 2.6E-42 349.3 17.2 270 698-987 23-310 (327)
162 1u5q_A Serine/threonine protei 100.0 2.5E-37 8.4E-42 347.0 21.5 251 696-974 52-306 (348)
163 2yex_A Serine/threonine-protei 100.0 6.3E-37 2.2E-41 333.0 23.9 254 696-973 5-261 (276)
164 2pvf_A Fibroblast growth facto 100.0 2.1E-37 7.3E-42 346.6 20.6 263 697-981 34-319 (334)
165 1xbb_A Tyrosine-protein kinase 100.0 1.5E-37 5E-42 340.8 18.9 259 698-982 16-281 (291)
166 1mqb_A Ephrin type-A receptor 100.0 1.7E-37 5.7E-42 347.0 19.6 262 698-984 44-313 (333)
167 3mdy_A Bone morphogenetic prot 100.0 7.8E-37 2.7E-41 342.7 25.1 269 695-982 34-333 (337)
168 3t9t_A Tyrosine-protein kinase 100.0 1.4E-37 4.8E-42 336.4 18.2 256 698-981 8-265 (267)
169 1k9a_A Carboxyl-terminal SRC k 100.0 1.7E-37 5.9E-42 361.1 20.3 252 698-981 193-446 (450)
170 1b6c_B TGF-B superfamily recep 100.0 5E-37 1.7E-41 345.0 23.4 267 694-982 38-338 (342)
171 2v62_A Serine/threonine-protei 100.0 1.3E-37 4.6E-42 349.7 18.7 268 697-980 36-328 (345)
172 1t4h_A Serine/threonine-protei 100.0 5.4E-37 1.9E-41 336.2 23.0 250 698-973 26-282 (290)
173 3kfa_A Tyrosine-protein kinase 100.0 1.5E-37 5.2E-42 340.2 18.5 259 697-981 12-272 (288)
174 3g33_A Cell division protein k 100.0 2.2E-37 7.5E-42 342.4 19.9 267 696-973 7-296 (308)
175 3mwu_A Calmodulin-domain prote 100.0 2.8E-37 9.7E-42 363.6 22.0 256 694-973 18-276 (486)
176 1fvr_A Tyrosine-protein kinase 100.0 1.1E-37 3.8E-42 347.9 17.6 268 698-988 25-308 (327)
177 2r3i_A Cell division protein k 100.0 2.6E-37 9E-42 340.3 20.1 265 698-973 3-283 (299)
178 2a19_B Interferon-induced, dou 100.0 1.2E-37 4.1E-42 340.2 16.7 256 694-984 7-278 (284)
179 2xrw_A Mitogen-activated prote 100.0 3.8E-37 1.3E-41 349.5 21.3 261 697-973 24-318 (371)
180 2vd5_A DMPK protein; serine/th 100.0 1.3E-37 4.5E-42 355.4 17.6 256 697-973 60-327 (412)
181 1ua2_A CAK, cell division prot 100.0 2.3E-37 7.7E-42 348.0 19.2 268 695-974 7-292 (346)
182 3op5_A Serine/threonine-protei 100.0 1.8E-37 6.3E-42 351.4 18.6 271 697-982 34-331 (364)
183 3mi9_A Cell division protein k 100.0 1.1E-36 3.6E-41 343.6 24.7 265 697-973 16-311 (351)
184 3gxj_A TGF-beta receptor type- 100.0 6.1E-39 2.1E-43 354.1 6.1 264 697-982 2-299 (303)
185 4fvq_A Tyrosine-protein kinase 100.0 2.4E-37 8.2E-42 338.8 18.6 253 697-980 7-275 (289)
186 3lzb_A Epidermal growth factor 100.0 8.8E-38 3E-42 348.2 15.2 259 698-982 15-280 (327)
187 3a7i_A MST3 kinase, serine/thr 100.0 1.3E-36 4.3E-41 335.5 24.3 251 697-974 21-271 (303)
188 3dbq_A Dual specificity protei 100.0 2.8E-37 9.5E-42 346.9 19.3 251 698-974 9-274 (343)
189 2buj_A Serine/threonine-protei 100.0 1.5E-37 5.3E-42 345.2 17.1 264 698-982 29-308 (317)
190 4hgt_A Casein kinase I isoform 100.0 6.6E-37 2.2E-41 336.6 21.9 265 695-982 6-282 (296)
191 1cm8_A Phosphorylated MAP kina 100.0 3.1E-37 1E-41 349.1 19.7 263 697-979 24-315 (367)
192 3brb_A Proto-oncogene tyrosine 100.0 2.3E-37 7.9E-42 343.1 18.3 263 697-980 33-308 (313)
193 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.2E-37 7.5E-42 360.4 18.8 256 698-981 184-441 (452)
194 2acx_A G protein-coupled recep 100.0 3E-37 1E-41 362.7 20.1 255 698-973 184-444 (576)
195 3i6u_A CDS1, serine/threonine- 100.0 1.8E-37 6.1E-42 357.5 17.8 257 694-973 131-399 (419)
196 3llt_A Serine/threonine kinase 100.0 1.2E-36 4.2E-41 344.3 24.4 199 696-906 33-261 (360)
197 1x8b_A WEE1HU, WEE1-like prote 100.0 2.8E-37 9.5E-42 338.1 18.5 251 695-973 8-279 (289)
198 2y7j_A Phosphorylase B kinase 100.0 1.2E-36 4.1E-41 344.2 24.2 257 694-973 90-359 (365)
199 1nxk_A MAP kinase-activated pr 100.0 6.6E-37 2.2E-41 350.2 22.0 251 697-973 60-321 (400)
200 3n9x_A Phosphotransferase; mal 100.0 7.6E-37 2.6E-41 353.9 22.7 202 696-905 24-253 (432)
201 2jam_A Calcium/calmodulin-depe 100.0 9E-37 3.1E-41 336.8 22.3 253 695-973 6-261 (304)
202 2ac3_A MAP kinase-interacting 100.0 1.1E-37 3.8E-42 346.2 14.9 259 697-973 11-295 (316)
203 1p4o_A Insulin-like growth fac 100.0 2.5E-37 8.6E-42 344.3 17.8 264 697-982 24-301 (322)
204 2xir_A Vascular endothelial gr 100.0 2.1E-37 7.1E-42 344.0 16.9 263 697-980 26-310 (316)
205 2vgo_A Serine/threonine-protei 100.0 4.9E-37 1.7E-41 335.4 19.5 248 698-973 14-262 (284)
206 3nyv_A Calmodulin-domain prote 100.0 5.1E-37 1.8E-41 361.6 21.0 255 695-973 23-281 (484)
207 3q5i_A Protein kinase; CDPK, m 100.0 9E-37 3.1E-41 360.9 23.1 255 695-973 33-301 (504)
208 3fme_A Dual specificity mitoge 100.0 2.8E-37 9.6E-42 338.4 17.5 257 697-973 6-266 (290)
209 3uzp_A CKI-delta, CKID, casein 100.0 1.2E-36 4.3E-41 334.3 22.6 263 697-982 8-282 (296)
210 3com_A Serine/threonine-protei 100.0 9.1E-37 3.1E-41 338.5 21.4 253 695-973 26-278 (314)
211 2id5_A Lingo-1, leucine rich r 100.0 1.2E-36 4.2E-41 358.2 23.6 321 189-536 14-334 (477)
212 2zmd_A Dual specificity protei 100.0 3.9E-37 1.3E-41 351.1 18.8 250 698-973 56-320 (390)
213 1u59_A Tyrosine-protein kinase 100.0 6.9E-37 2.4E-41 334.7 19.7 258 699-982 10-274 (287)
214 3rp9_A Mitogen-activated prote 100.0 4.6E-37 1.6E-41 359.3 19.0 196 697-900 52-280 (458)
215 1qpc_A LCK kinase; alpha beta 100.0 1.7E-36 5.7E-41 330.3 22.0 256 697-980 12-269 (279)
216 3g2f_A Bone morphogenetic prot 100.0 1.8E-37 6.1E-42 347.8 14.6 266 698-980 13-318 (336)
217 3cc6_A Protein tyrosine kinase 100.0 3.8E-37 1.3E-41 335.8 16.7 260 697-982 11-275 (281)
218 3c1x_A Hepatocyte growth facto 100.0 3E-37 1E-41 349.4 16.3 258 699-981 90-356 (373)
219 3pls_A Macrophage-stimulating 100.0 1.5E-36 5.3E-41 333.9 21.5 259 699-981 22-288 (298)
220 2jii_A Serine/threonine-protei 100.0 1.5E-37 5.2E-42 350.4 13.7 264 698-982 42-338 (352)
221 2clq_A Mitogen-activated prote 100.0 1.5E-36 5.1E-41 333.5 21.1 252 700-973 24-278 (295)
222 3lxp_A Non-receptor tyrosine-p 100.0 1.3E-37 4.6E-42 345.6 12.8 262 700-982 33-312 (318)
223 3f66_A Hepatocyte growth facto 100.0 1.1E-36 3.9E-41 335.1 20.1 259 698-981 25-292 (298)
224 2j7t_A Serine/threonine-protei 100.0 4.2E-37 1.4E-41 339.2 16.6 254 696-973 17-275 (302)
225 2fst_X Mitogen-activated prote 100.0 5.3E-37 1.8E-41 346.8 17.8 258 696-973 27-311 (367)
226 2h6d_A 5'-AMP-activated protei 100.0 8.6E-37 2.9E-41 332.0 18.3 249 698-973 11-261 (276)
227 3byv_A Rhoptry kinase; malaria 100.0 6.9E-38 2.4E-42 356.5 10.0 246 697-973 72-359 (377)
228 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1E-36 3.5E-41 345.5 19.2 254 697-981 64-340 (365)
229 2wei_A Calmodulin-domain prote 100.0 2.1E-36 7.3E-41 330.8 21.0 256 694-973 18-276 (287)
230 4fl3_A Tyrosine-protein kinase 100.0 1.4E-36 4.7E-41 366.5 21.2 250 704-979 375-630 (635)
231 2ycf_A Serine/threonine-protei 100.0 9.3E-37 3.2E-41 339.6 18.1 257 694-973 6-274 (322)
232 3eqc_A Dual specificity mitoge 100.0 1.6E-36 5.4E-41 343.4 20.2 201 697-906 32-232 (360)
233 2ozo_A Tyrosine-protein kinase 100.0 1E-36 3.5E-41 366.9 19.6 250 705-980 343-598 (613)
234 3pfq_A PKC-B, PKC-beta, protei 100.0 8.6E-37 2.9E-41 370.9 19.1 251 697-973 340-597 (674)
235 1phk_A Phosphorylase kinase; g 100.0 4.6E-36 1.6E-40 330.2 23.2 255 696-973 15-283 (298)
236 2yfx_A Tyrosine-protein kinase 100.0 5.5E-37 1.9E-41 342.2 15.9 265 697-983 29-307 (327)
237 2w1i_A JAK2; chromosomal rearr 100.0 1.3E-36 4.5E-41 338.9 18.4 263 698-980 41-322 (326)
238 3eb0_A Putative uncharacterize 100.0 2E-36 7E-41 345.2 20.3 262 696-973 5-321 (383)
239 3an0_A Dual specificity mitoge 100.0 1.2E-36 4E-41 341.7 17.5 261 698-979 51-318 (340)
240 4exu_A Mitogen-activated prote 100.0 2.9E-36 1E-40 342.2 20.8 257 696-973 40-323 (371)
241 3sv0_A Casein kinase I-like; t 100.0 7.4E-36 2.5E-40 347.5 24.6 263 697-981 6-279 (483)
242 1vzo_A Ribosomal protein S6 ki 100.0 8.9E-37 3E-41 344.1 16.2 256 698-975 54-323 (355)
243 3nsz_A CK II alpha, casein kin 100.0 5.9E-36 2E-40 334.5 22.5 260 697-973 35-319 (330)
244 1u46_A ACK-1, activated CDC42 100.0 8.3E-37 2.8E-41 334.9 15.2 263 697-983 17-287 (291)
245 2x7f_A TRAF2 and NCK-interacti 100.0 4.4E-36 1.5E-40 334.9 21.2 254 695-973 21-286 (326)
246 2h8h_A Proto-oncogene tyrosine 100.0 7.3E-37 2.5E-41 363.1 15.7 257 698-982 267-525 (535)
247 2wtk_C Serine/threonine-protei 100.0 5.6E-36 1.9E-40 330.7 21.5 253 696-973 3-263 (305)
248 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.3E-36 4.3E-41 338.2 16.3 262 697-985 32-307 (319)
249 1zy4_A Serine/threonine-protei 100.0 6E-36 2.1E-40 330.0 21.5 253 695-973 3-283 (303)
250 1byg_A CSK, protein (C-termina 100.0 2E-36 6.7E-41 329.5 17.2 253 697-981 20-274 (278)
251 3ll6_A Cyclin G-associated kin 100.0 1.5E-36 5E-41 340.5 16.4 257 698-982 28-310 (337)
252 3o6n_A APL1; leucine-rich repe 100.0 9.4E-36 3.2E-40 340.9 23.4 312 87-440 42-353 (390)
253 3q60_A ROP5B; pseudokinase, tr 100.0 7.5E-37 2.6E-41 347.3 14.1 253 698-973 62-352 (371)
254 3kvw_A DYRK2, dual specificity 100.0 3.7E-36 1.3E-40 347.4 19.9 199 696-906 95-301 (429)
255 3rgf_A Cyclin-dependent kinase 100.0 4E-36 1.4E-40 345.5 19.8 204 696-907 18-239 (405)
256 1j1b_A Glycogen synthase kinas 100.0 7.7E-36 2.6E-40 343.9 20.9 269 698-978 54-343 (420)
257 1ogq_A PGIP-2, polygalacturona 100.0 2E-36 7E-41 334.6 15.4 260 354-615 50-313 (313)
258 2vwi_A Serine/threonine-protei 100.0 1.2E-36 4.2E-41 335.6 13.2 262 697-973 14-287 (303)
259 3qyz_A Mitogen-activated prote 100.0 6.1E-36 2.1E-40 338.8 19.0 260 697-973 26-313 (364)
260 3coi_A Mitogen-activated prote 100.0 7.3E-36 2.5E-40 336.9 19.1 256 697-973 23-305 (353)
261 3e3p_A Protein kinase, putativ 100.0 3.9E-36 1.3E-40 340.3 16.9 267 694-973 19-314 (360)
262 3oja_B Anopheles plasmodium-re 100.0 1.3E-35 4.5E-40 358.5 21.9 336 233-611 50-385 (597)
263 1wak_A Serine/threonine-protei 100.0 1.1E-35 3.7E-40 341.5 20.1 266 697-973 36-391 (397)
264 1blx_A Cyclin-dependent kinase 100.0 1E-35 3.6E-40 331.9 19.4 270 696-979 9-304 (326)
265 2pml_X PFPK7, Ser/Thr protein 100.0 6.2E-36 2.1E-40 337.0 17.6 263 697-973 30-322 (348)
266 2i6l_A Mitogen-activated prote 100.0 9.8E-36 3.3E-40 331.1 18.9 259 696-973 9-305 (320)
267 3o6n_A APL1; leucine-rich repe 100.0 2.1E-35 7.2E-40 338.0 21.9 336 233-611 44-379 (390)
268 3oja_B Anopheles plasmodium-re 100.0 2.9E-35 1E-39 355.4 24.1 350 36-441 7-360 (597)
269 2b9h_A MAP kinase FUS3, mitoge 100.0 1.9E-35 6.5E-40 333.7 20.8 267 696-978 9-312 (353)
270 2vx3_A Dual specificity tyrosi 100.0 3.4E-35 1.2E-39 334.9 22.4 201 696-906 52-260 (382)
271 4e7w_A Glycogen synthase kinas 100.0 1.6E-35 5.3E-40 338.6 19.3 260 697-973 39-321 (394)
272 1z57_A Dual specificity protei 100.0 4.1E-35 1.4E-39 328.9 22.4 263 697-973 13-328 (339)
273 3pg1_A Mitogen-activated prote 100.0 1E-35 3.6E-40 337.0 17.1 266 694-973 18-316 (362)
274 2j0j_A Focal adhesion kinase 1 100.0 9.9E-36 3.4E-40 360.5 17.5 259 697-981 389-652 (656)
275 3cek_A Dual specificity protei 100.0 2.6E-35 8.9E-40 326.6 19.4 251 697-973 27-292 (313)
276 3fhr_A MAP kinase-activated pr 100.0 2.5E-35 8.5E-40 329.7 19.2 253 696-973 26-287 (336)
277 2dyl_A Dual specificity mitoge 100.0 3.8E-35 1.3E-39 326.1 19.9 254 697-973 24-283 (318)
278 4fcg_A Uncharacterized protein 100.0 4.6E-36 1.6E-40 333.7 12.1 275 15-321 23-316 (328)
279 3aln_A Dual specificity mitoge 100.0 2.2E-35 7.5E-40 329.3 17.4 257 698-973 22-285 (327)
280 3a99_A Proto-oncogene serine/t 100.0 1.1E-35 3.8E-40 330.4 14.0 244 696-973 41-293 (320)
281 2iwi_A Serine/threonine-protei 100.0 1.5E-35 5E-40 328.5 14.7 246 694-973 27-283 (312)
282 2eu9_A Dual specificity protei 100.0 1.3E-34 4.4E-39 327.2 21.9 263 697-973 18-333 (355)
283 1q8y_A SR protein kinase; tran 100.0 5.2E-35 1.8E-39 332.8 17.3 271 698-979 19-341 (373)
284 3qa8_A MGC80376 protein; kinas 100.0 4.6E-35 1.6E-39 347.0 14.1 277 696-982 12-311 (676)
285 4fmz_A Internalin; leucine ric 100.0 1.2E-33 4.2E-38 318.0 24.8 308 229-583 39-346 (347)
286 2rio_A Serine/threonine-protei 100.0 1.3E-34 4.6E-39 335.1 17.0 252 698-973 15-295 (434)
287 3uqc_A Probable conserved tran 100.0 3.4E-34 1.2E-38 312.3 19.1 235 696-982 29-267 (286)
288 4fmz_A Internalin; leucine ric 100.0 1.5E-33 5.1E-38 317.4 23.5 308 205-559 39-346 (347)
289 3p23_A Serine/threonine-protei 100.0 3.1E-34 1.1E-38 330.8 15.3 246 699-973 25-283 (432)
290 2pzi_A Probable serine/threoni 100.0 8.2E-34 2.8E-38 347.5 18.7 242 697-979 79-327 (681)
291 3m2w_A MAP kinase-activated pr 100.0 5.2E-33 1.8E-37 305.8 20.1 233 696-973 15-256 (299)
292 2ft3_A Biglycan; proteoglycan, 100.0 1.6E-32 5.4E-37 306.7 23.7 288 283-581 34-331 (332)
293 3dzo_A Rhoptry kinase domain; 100.0 3.2E-33 1.1E-37 321.3 17.0 244 698-972 78-362 (413)
294 2ft3_A Biglycan; proteoglycan, 100.0 2.6E-32 8.8E-37 305.0 22.8 294 115-437 34-331 (332)
295 1xku_A Decorin; proteoglycan, 100.0 4.7E-32 1.6E-36 302.6 23.5 289 259-581 32-330 (330)
296 1xku_A Decorin; proteoglycan, 100.0 7.5E-32 2.6E-36 301.0 23.9 295 115-437 32-330 (330)
297 1z7x_W Ribonuclease inhibitor; 100.0 3.9E-36 1.3E-40 352.5 -15.4 379 186-584 3-441 (461)
298 2vuw_A Serine/threonine-protei 100.0 8E-33 2.7E-37 309.7 12.0 244 697-972 19-329 (336)
299 1z7x_W Ribonuclease inhibitor; 100.0 3E-36 1E-40 353.4 -17.3 355 90-464 3-412 (461)
300 4fcg_A Uncharacterized protein 100.0 8.3E-32 2.8E-36 299.4 6.7 281 26-343 20-314 (328)
301 3ogk_B Coronatine-insensitive 100.0 1.2E-33 4.2E-38 342.4 -9.3 433 53-513 40-528 (592)
302 2z80_A TOLL-like receptor 2, v 100.0 9E-31 3.1E-35 295.1 14.3 282 53-347 28-318 (353)
303 3ogk_B Coronatine-insensitive 100.0 1E-32 3.6E-37 334.2 -6.0 395 184-580 110-548 (592)
304 2z80_A TOLL-like receptor 2, v 100.0 1.4E-29 4.7E-34 285.4 18.0 280 282-588 31-319 (353)
305 2z66_A Variable lymphocyte rec 100.0 4.2E-30 1.4E-34 283.6 13.1 286 53-353 5-297 (306)
306 2z66_A Variable lymphocyte rec 100.0 3.1E-29 1.1E-33 276.7 17.0 280 286-569 11-297 (306)
307 1wwl_A Monocyte differentiatio 100.0 2.7E-30 9.4E-35 285.6 5.8 248 86-343 39-309 (312)
308 1wwl_A Monocyte differentiatio 100.0 5.3E-30 1.8E-34 283.3 4.5 259 53-321 29-311 (312)
309 1ozn_A Reticulon 4 receptor; N 100.0 8.2E-28 2.8E-32 262.3 19.0 238 306-568 32-270 (285)
310 3zyi_A Leucine-rich repeat-con 100.0 1.5E-27 5.1E-32 278.2 21.7 250 308-586 56-306 (452)
311 3o53_A Protein LRIM1, AGAP0063 100.0 2.4E-29 8.3E-34 278.6 5.9 267 284-588 12-281 (317)
312 3zyj_A Leucine-rich repeat-con 99.9 2.4E-27 8.1E-32 275.5 21.6 249 308-585 45-294 (440)
313 1ozn_A Reticulon 4 receptor; N 99.9 1.3E-27 4.6E-32 260.6 18.3 234 355-589 33-267 (285)
314 3zyi_A Leucine-rich repeat-con 99.9 2.8E-27 9.6E-32 275.9 20.9 244 116-364 56-300 (452)
315 3g06_A SSPH2 (leucine-rich rep 99.9 3.8E-27 1.3E-31 281.5 22.0 268 234-569 40-307 (622)
316 3o53_A Protein LRIM1, AGAP0063 99.9 2.4E-29 8.1E-34 278.7 1.8 270 333-616 13-285 (317)
317 3zyj_A Leucine-rich repeat-con 99.9 5.2E-27 1.8E-31 272.6 21.3 245 117-390 46-291 (440)
318 4azs_A Methyltransferase WBDD; 99.9 1.9E-28 6.5E-33 291.0 6.1 186 706-902 242-436 (569)
319 3g06_A SSPH2 (leucine-rich rep 99.9 2.4E-26 8.2E-31 274.6 24.2 269 210-546 40-308 (622)
320 2o6q_A Variable lymphocyte rec 99.9 1.2E-26 4.3E-31 250.6 18.0 216 53-271 3-218 (270)
321 3oja_A Leucine-rich immune mol 99.9 1.4E-27 4.7E-32 279.9 7.2 236 305-578 33-270 (487)
322 2p1m_B Transport inhibitor res 99.9 1.4E-29 4.7E-34 307.0 -10.2 390 186-580 105-541 (594)
323 3oja_A Leucine-rich immune mol 99.9 3.2E-27 1.1E-31 276.9 8.9 239 280-556 32-272 (487)
324 2z62_A TOLL-like receptor 4, v 99.9 1.5E-25 5.3E-30 243.0 19.1 227 359-589 12-243 (276)
325 2p1m_B Transport inhibitor res 99.9 3.6E-29 1.2E-33 303.3 -13.9 432 108-558 60-543 (594)
326 2z62_A TOLL-like receptor 4, v 99.9 2.3E-24 7.9E-29 233.7 19.1 203 164-367 30-237 (276)
327 2o6q_A Variable lymphocyte rec 99.9 5.1E-24 1.7E-28 230.1 20.2 185 403-587 38-222 (270)
328 3rfs_A Internalin B, repeat mo 99.9 1.7E-24 6E-29 233.9 15.6 207 86-303 37-243 (272)
329 3rfs_A Internalin B, repeat mo 99.9 9.8E-25 3.4E-29 235.9 12.5 180 400-588 61-240 (272)
330 2ast_B S-phase kinase-associat 99.9 1.7E-26 5.8E-31 258.4 -1.5 266 53-327 35-314 (336)
331 1p9a_G Platelet glycoprotein I 99.9 2E-23 6.9E-28 227.3 17.7 203 351-584 7-209 (290)
332 1p9a_G Platelet glycoprotein I 99.9 2E-23 6.7E-28 227.4 17.6 205 398-609 6-211 (290)
333 3goz_A Leucine-rich repeat-con 99.9 1E-25 3.5E-30 254.5 -1.2 255 95-369 3-299 (362)
334 3en9_A Glycoprotease, O-sialog 99.9 1.3E-24 4.6E-29 256.6 8.2 186 701-905 339-539 (540)
335 4glp_A Monocyte differentiatio 99.9 9.1E-24 3.1E-28 233.0 14.1 223 91-319 65-307 (310)
336 4glp_A Monocyte differentiatio 99.9 5.6E-24 1.9E-28 234.7 11.3 200 379-584 92-308 (310)
337 3m19_A Variable lymphocyte rec 99.9 2E-23 6.9E-28 222.7 14.7 192 53-273 3-194 (251)
338 3goz_A Leucine-rich repeat-con 99.9 5.3E-25 1.8E-29 248.6 -0.0 259 70-348 2-302 (362)
339 2ast_B S-phase kinase-associat 99.9 1.2E-24 4.1E-29 243.4 0.5 222 91-316 48-282 (336)
340 3m19_A Variable lymphocyte rec 99.9 1.7E-22 6E-27 215.4 17.2 183 403-588 15-197 (251)
341 2ca6_A RAN GTPase-activating p 99.9 3.9E-25 1.3E-29 252.3 -4.3 240 82-321 24-318 (386)
342 2xwt_C Thyrotropin receptor; s 99.9 1.3E-22 4.5E-27 214.8 14.3 196 379-580 32-236 (239)
343 2xwt_C Thyrotropin receptor; s 99.9 1.4E-22 4.7E-27 214.6 13.9 196 139-340 32-236 (239)
344 2ca6_A RAN GTPase-activating p 99.9 8.3E-25 2.8E-29 249.5 -4.1 247 297-563 23-320 (386)
345 1h6u_A Internalin H; cell adhe 99.9 7.9E-22 2.7E-26 217.0 14.9 192 377-584 40-231 (308)
346 1h6u_A Internalin H; cell adhe 99.9 7.2E-22 2.5E-26 217.2 13.8 194 111-320 38-231 (308)
347 2o6s_A Variable lymphocyte rec 99.9 2.3E-21 7.8E-26 200.4 15.0 186 53-259 5-190 (208)
348 4ay9_X Follicle-stimulating ho 99.9 1.3E-21 4.5E-26 219.5 14.3 246 53-341 7-257 (350)
349 4ay9_X Follicle-stimulating ho 99.8 1E-20 3.5E-25 212.2 17.5 220 357-581 33-257 (350)
350 3cvr_A Invasion plasmid antige 99.8 1E-21 3.4E-26 231.7 9.5 199 56-307 49-255 (571)
351 2o6s_A Variable lymphocyte rec 99.8 8.2E-21 2.8E-25 196.3 14.5 160 403-569 29-188 (208)
352 3cvr_A Invasion plasmid antige 99.8 4.9E-21 1.7E-25 225.8 13.9 167 379-570 81-254 (571)
353 1zar_A RIO2 kinase; serine kin 99.8 2.7E-21 9.2E-26 209.1 9.7 145 700-877 92-252 (282)
354 2v70_A SLIT-2, SLIT homolog 2 99.8 8.1E-21 2.8E-25 197.8 9.5 156 430-588 15-171 (220)
355 4b8c_D Glucose-repressible alc 99.8 1.2E-21 4.1E-26 240.0 1.1 268 15-344 128-405 (727)
356 2v9t_B SLIT homolog 2 protein 99.8 3.2E-20 1.1E-24 193.2 10.0 154 430-586 15-168 (220)
357 1m9s_A Internalin B; cell inva 99.8 5.8E-20 2E-24 219.3 11.0 193 92-324 23-215 (605)
358 3e6j_A Variable lymphocyte rec 99.8 3.8E-19 1.3E-23 186.4 14.1 155 429-587 22-176 (229)
359 1h6t_A Internalin B; cell adhe 99.8 7.2E-20 2.4E-24 199.4 8.4 171 136-320 44-214 (291)
360 3e6j_A Variable lymphocyte rec 99.8 4.5E-19 1.6E-23 185.8 14.1 158 51-223 15-172 (229)
361 1m9s_A Internalin B; cell inva 99.8 9.8E-20 3.3E-24 217.3 10.0 174 158-345 39-212 (605)
362 2xot_A Amphoterin-induced prot 99.8 1.2E-19 4.2E-24 204.3 10.3 176 381-559 21-202 (361)
363 1h6t_A Internalin B; cell adhe 99.8 2.3E-19 7.9E-24 195.4 12.0 173 111-297 43-215 (291)
364 2v70_A SLIT-2, SLIT homolog 2 99.8 5.1E-19 1.8E-23 184.1 13.2 156 405-563 14-170 (220)
365 2v9t_B SLIT homolog 2 protein 99.8 7.4E-19 2.5E-23 182.9 13.3 152 406-560 15-166 (220)
366 1dce_A Protein (RAB geranylger 99.8 2.1E-21 7.3E-26 230.4 -7.3 188 353-563 348-550 (567)
367 2xot_A Amphoterin-induced prot 99.8 6.1E-19 2.1E-23 198.6 12.6 176 357-535 21-202 (361)
368 1dce_A Protein (RAB geranylger 99.8 8.6E-21 2.9E-25 225.1 -5.3 104 236-344 443-547 (567)
369 4b8c_D Glucose-repressible alc 99.7 2.5E-19 8.6E-24 219.4 4.4 181 394-584 216-405 (727)
370 1w8a_A SLIT protein; signaling 99.7 1.8E-18 6.2E-23 175.8 8.4 136 475-610 30-166 (192)
371 4ezg_A Putative uncharacterize 99.7 2.9E-18 9.9E-23 175.3 9.3 154 399-583 41-194 (197)
372 1xeu_A Internalin C; cellular 99.7 1.7E-18 5.7E-23 185.5 6.6 127 158-295 59-185 (263)
373 1zth_A RIO1 serine protein kin 99.7 9.7E-18 3.3E-22 179.0 10.7 139 700-854 49-219 (258)
374 4ezg_A Putative uncharacterize 99.7 1.6E-17 5.4E-22 169.8 11.5 154 374-534 40-193 (197)
375 1xeu_A Internalin C; cellular 99.7 1.4E-17 4.6E-22 178.4 10.9 171 280-465 17-187 (263)
376 1w8a_A SLIT protein; signaling 99.7 1.7E-17 6E-22 168.5 8.7 130 405-537 11-141 (192)
377 3sb4_A Hypothetical leucine ri 99.7 1.7E-17 5.8E-22 184.3 7.3 265 233-529 48-328 (329)
378 3sb4_A Hypothetical leucine ri 99.7 1.8E-17 6.1E-22 184.2 7.2 101 378-480 226-327 (329)
379 2ell_A Acidic leucine-rich nuc 99.6 3.2E-16 1.1E-20 155.6 9.9 133 426-584 24-161 (168)
380 2ell_A Acidic leucine-rich nuc 99.6 3.7E-16 1.3E-20 155.1 10.3 133 401-559 23-160 (168)
381 2wfh_A SLIT homolog 2 protein 99.6 1E-15 3.6E-20 155.3 11.7 129 454-586 14-142 (193)
382 2o6r_A Variable lymphocyte rec 99.6 7.9E-16 2.7E-20 154.2 10.6 115 474-588 28-142 (177)
383 2je0_A Acidic leucine-rich nuc 99.6 5E-16 1.7E-20 150.8 8.3 127 426-554 17-148 (149)
384 2je0_A Acidic leucine-rich nuc 99.6 2.9E-16 9.8E-21 152.5 6.3 129 449-579 16-149 (149)
385 2o6r_A Variable lymphocyte rec 99.6 1.9E-15 6.5E-20 151.4 11.1 132 429-563 10-141 (177)
386 2wfh_A SLIT homolog 2 protein 99.6 2.3E-15 8E-20 152.7 10.5 109 451-560 32-140 (193)
387 4fdw_A Leucine rich hypothetic 99.6 3.7E-14 1.3E-18 160.8 20.7 270 162-463 113-383 (401)
388 4fdw_A Leucine rich hypothetic 99.6 2.7E-14 9.4E-19 161.8 18.7 269 258-582 113-382 (401)
389 4fs7_A Uncharacterized protein 99.6 5E-14 1.7E-18 160.5 19.5 158 151-315 60-217 (394)
390 4gyi_A RIO2 kinase; protein ki 99.6 1.1E-15 3.8E-20 168.7 5.5 141 700-856 97-267 (397)
391 1ds9_A Outer arm dynein; leuci 99.5 5.9E-17 2E-21 165.6 -5.9 151 426-583 18-185 (198)
392 4fs7_A Uncharacterized protein 99.5 1.8E-13 6.2E-18 155.8 21.8 160 198-364 59-218 (394)
393 1a9n_A U2A', U2A'; complex (nu 99.5 4.7E-15 1.6E-19 148.3 5.7 133 422-583 15-153 (176)
394 1a9n_A U2A', U2A'; complex (nu 99.5 8.7E-15 3E-19 146.4 7.6 135 396-560 13-154 (176)
395 1ds9_A Outer arm dynein; leuci 99.5 1.3E-16 4.3E-21 163.2 -6.0 137 110-251 14-157 (198)
396 3g39_A Variable lymphocyte rec 99.5 7.1E-14 2.4E-18 138.6 9.1 107 478-587 13-119 (170)
397 2r9u_A Variable lymphocyte rec 99.4 1.9E-13 6.5E-18 136.0 9.1 106 479-587 17-122 (174)
398 3g39_A Variable lymphocyte rec 99.4 2.7E-13 9.1E-18 134.5 9.1 88 474-561 30-117 (170)
399 2r9u_A Variable lymphocyte rec 99.4 7.9E-13 2.7E-17 131.5 9.4 103 430-535 16-118 (174)
400 4gt6_A Cell surface protein; l 99.3 9.4E-11 3.2E-15 133.3 23.4 329 228-581 57-389 (394)
401 4gt6_A Cell surface protein; l 99.3 5.4E-11 1.8E-15 135.3 19.8 132 154-290 55-190 (394)
402 3un9_A NLR family member X1; l 99.3 3.3E-14 1.1E-18 159.6 -7.4 158 139-296 73-253 (372)
403 3un9_A NLR family member X1; l 99.3 3.9E-14 1.3E-18 159.0 -8.1 164 90-273 72-254 (372)
404 2ifg_A High affinity nerve gro 99.2 8E-12 2.7E-16 139.7 8.0 103 480-585 14-118 (347)
405 2ifg_A High affinity nerve gro 99.2 1.9E-11 6.5E-16 136.6 8.9 102 431-535 13-116 (347)
406 3tm0_A Aminoglycoside 3'-phosp 99.1 1.8E-10 6.1E-15 123.1 11.1 144 696-852 12-212 (263)
407 4h09_A Hypothetical leucine ri 99.0 1.4E-08 4.7E-13 114.7 20.3 144 397-545 212-355 (379)
408 2ra8_A Uncharacterized protein 99.0 5.7E-11 2E-15 131.9 0.1 202 66-293 107-341 (362)
409 4h09_A Hypothetical leucine ri 99.0 2E-08 6.8E-13 113.4 20.6 166 398-569 190-355 (379)
410 2ra8_A Uncharacterized protein 98.9 1.7E-10 5.9E-15 128.1 1.5 137 180-319 166-320 (362)
411 1nd4_A Aminoglycoside 3'-phosp 98.9 2.1E-09 7.2E-14 114.6 9.0 129 707-853 29-214 (264)
412 3dxp_A Putative acyl-COA dehyd 98.9 7.3E-09 2.5E-13 116.0 11.7 142 703-853 43-248 (359)
413 3rw6_A Nuclear RNA export fact 98.8 4.4E-11 1.5E-15 125.8 -7.5 143 54-200 77-234 (267)
414 3sg8_A APH(2'')-ID; antibiotic 98.7 5.5E-09 1.9E-13 114.1 4.5 184 703-904 25-287 (304)
415 3rw6_A Nuclear RNA export fact 98.6 1.1E-08 3.9E-13 107.4 1.9 105 470-576 137-257 (267)
416 3r70_A Aminoglycoside phosphot 98.5 2.8E-07 9.6E-12 101.2 9.9 136 700-854 39-238 (320)
417 1io0_A Tropomodulin; LRR prote 98.4 8.6E-09 3E-13 103.2 -4.4 118 82-199 28-164 (185)
418 1io0_A Tropomodulin; LRR prote 98.3 3.6E-08 1.2E-12 98.7 -1.4 91 493-583 60-164 (185)
419 4gkh_A Aminoglycoside 3'-phosp 98.3 3.5E-06 1.2E-10 90.0 13.0 136 705-853 31-223 (272)
420 3tdw_A Gentamicin resistance p 98.2 1.4E-05 4.7E-10 86.9 13.7 136 703-853 24-224 (306)
421 3d1u_A Putative fructosamine-3 98.1 1.5E-05 5E-10 85.6 12.4 142 702-852 19-215 (288)
422 3ovc_A Hygromycin-B 4-O-kinase 98.0 2.7E-05 9.4E-10 86.5 11.9 143 702-853 45-243 (362)
423 3e4g_A ATP synthase subunit S, 97.8 3.2E-06 1.1E-10 82.1 0.6 34 139-172 62-95 (176)
424 3e4g_A ATP synthase subunit S, 97.8 6.2E-06 2.1E-10 80.2 1.8 82 235-316 62-149 (176)
425 2olc_A MTR kinase, methylthior 97.7 6.8E-05 2.3E-09 84.8 10.3 78 703-782 35-120 (397)
426 3ats_A Putative uncharacterize 97.7 0.00023 7.9E-09 79.0 13.3 84 703-786 25-122 (357)
427 2q83_A YTAA protein; 2635576, 97.6 0.00028 9.7E-09 77.8 12.1 141 704-852 38-251 (346)
428 3jr1_A Putative fructosamine-3 97.5 0.00075 2.6E-08 72.8 12.9 140 702-849 40-232 (312)
429 2pyw_A Uncharacterized protein 97.2 0.0012 4E-08 75.1 11.6 78 822-901 231-313 (420)
430 3f7w_A Putative fructosamine-3 97.1 0.0014 4.9E-08 70.1 10.3 78 700-784 17-97 (288)
431 3feg_A Choline/ethanolamine ki 97.0 0.0014 4.8E-08 72.7 9.0 143 704-853 56-254 (379)
432 1pgv_A TMD-1, tropomodulin TMD 97.0 7.7E-05 2.6E-09 73.9 -1.4 115 84-198 35-169 (197)
433 1pgv_A TMD-1, tropomodulin TMD 96.8 0.00012 4.1E-09 72.5 -1.5 15 110-124 37-51 (197)
434 3dxq_A Choline/ethanolamine ki 96.8 0.0033 1.1E-07 67.7 9.8 71 703-784 23-95 (301)
435 1nw1_A Choline kinase (49.2 KD 96.7 0.0029 9.8E-08 71.9 9.0 73 704-784 79-159 (429)
436 2qg7_A Ethanolamine kinase PV0 96.7 0.0044 1.5E-07 70.6 10.5 75 703-784 113-188 (458)
437 3csv_A Aminoglycoside phosphot 96.7 0.0053 1.8E-07 67.2 10.2 32 822-853 182-217 (333)
438 3rfe_A Platelet glycoprotein I 96.5 0.0024 8.1E-08 59.0 4.9 37 547-583 32-68 (130)
439 3rfe_A Platelet glycoprotein I 96.5 0.0027 9.4E-08 58.6 5.4 56 502-559 12-68 (130)
440 2ppq_A HSK, HK, homoserine kin 96.3 0.014 4.8E-07 63.4 10.9 144 704-853 28-217 (322)
441 3c5i_A Choline kinase; choline 96.0 0.019 6.5E-07 63.7 10.2 74 704-784 39-121 (369)
442 1zyl_A Hypothetical protein YI 96.0 0.051 1.7E-06 59.0 13.3 143 704-853 32-223 (328)
443 3i1a_A Spectinomycin phosphotr 95.8 0.033 1.1E-06 60.9 10.9 31 823-853 206-236 (339)
444 3f2s_A CK, chetk-alpha, cholin 95.7 0.023 7.8E-07 63.2 8.8 146 704-853 58-280 (401)
445 2yle_A Protein spire homolog 1 94.5 0.21 7.1E-06 49.6 10.6 103 782-903 33-135 (229)
446 3mes_A Choline kinase; malaria 94.1 0.18 6.1E-06 56.6 10.6 74 704-784 76-157 (424)
447 3g15_A CK, chetk-alpha, cholin 89.9 1.1 3.8E-05 49.9 10.6 30 824-853 245-280 (401)
448 4ann_A ESSB; membrane protein, 87.5 1.8 6E-05 43.0 8.7 115 755-905 43-158 (215)
449 3cxl_A N-chimerin; SH2, RHO-GA 83.5 0.13 4.4E-06 58.7 -2.0 62 703-767 147-214 (463)
450 4ano_A ESSB; membrane protein, 78.4 6.2 0.00021 39.2 8.4 114 755-905 48-163 (219)
451 2ks1_B Epidermal growth factor 73.9 1.4 4.6E-05 31.3 1.6 9 634-642 13-21 (44)
452 2l2t_A Receptor tyrosine-prote 72.4 1.1 3.7E-05 31.7 0.8 10 634-643 12-21 (44)
453 2k1k_A Ephrin type-A receptor 68.0 1.8 6.2E-05 29.6 1.1 17 631-647 10-26 (38)
454 2jwa_A Receptor tyrosine-prote 44.8 7.6 0.00026 27.4 1.1 9 634-642 14-22 (44)
455 2l8s_A Integrin alpha-1; trans 40.5 9.9 0.00034 28.1 1.2 25 636-660 15-39 (54)
456 2l6w_A Beta-type platelet-deri 42.6 7.5 0.00026 26.3 0.0 22 641-662 17-38 (39)
457 2x6h_A GH13170P, VPS34, phosph 32.8 2.2E+02 0.0076 33.4 11.6 84 761-852 477-575 (696)
458 2k1a_A Integrin alpha-IIB; sin 30.5 21 0.00073 24.9 1.5 8 638-645 18-25 (42)
459 2klu_A T-cell surface glycopro 29.9 16 0.00054 27.9 0.8 9 652-660 31-39 (70)
460 2lz0_A Uncharacterized protein 28.6 89 0.003 26.4 5.6 45 222-267 8-52 (100)
461 3ls8_A Phosphatidylinositol 3- 26.6 4.3E+02 0.015 30.5 12.3 84 760-851 402-500 (614)
462 2lz0_A Uncharacterized protein 25.1 1.5E+02 0.0053 24.9 6.5 38 323-361 13-50 (100)
463 2jp3_A FXYD domain-containing 23.6 25 0.00085 27.0 0.9 29 632-660 16-45 (67)
464 1cja_A Protein (actin-fragmin 22.0 2.3E+02 0.0079 29.8 8.2 137 703-853 74-237 (342)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.8e-88 Score=840.89 Aligned_cols=598 Identities=33% Similarity=0.490 Sum_probs=484.1
Q ss_pred HhccChHHhHHHHHHHHhhccCCCCCCCCCCCCCccccCCcCCceeeeEEeCCCCceeEEeccccccccc---cc-----
Q 037197 12 IVESNADDELSTLLSIKAGLIDPLNMLEDWKMPSNAAENGLLHCNWTGVWCNSRGFVEKLDLSNMSLNGS---VS----- 83 (1009)
Q Consensus 12 ~~~~~~~~~~~~ll~~k~~~~d~~~~l~~W~~~~~~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~l~~~---~~----- 83 (1009)
.+..+.++|++|||+||+++.||. .+++|+. +++||+|+||+|+ .++|++|||+++++.|. ++
T Consensus 5 ~~~~~~~~~~~all~~k~~~~~~~-~l~~W~~-------~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~ 75 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLPDKN-LLPDWSS-------NKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLS 75 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCSCTT-SSTTCCT-------TSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTT
T ss_pred ccccCCHHHHHHHHHHHhhCCCcc-cccCCCC-------CCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhHhc
Confidence 344457899999999999999998 8999973 3579999999998 79999999999999886 44
Q ss_pred ------------------cccccCCCCCeEecccCcccccCCc--cccccCccCcccccccccCCCCCCCC-CCCcCCeE
Q 037197 84 ------------------ENIRGLRSLSSLNICCNEFASSLPK--SLANLTALKSMDVSQNNFIGSFPTGL-GKASGLTS 142 (1009)
Q Consensus 84 ------------------~~l~~l~~L~~L~L~~n~~~~~~~~--~l~~l~~L~~L~Ls~n~l~~~~p~~l-~~l~~L~~ 142 (1009)
+.+..+++|++|+|++|.+++.+|. .++++++|++|||++|.+.+.+|..+ +++++|++
T Consensus 76 L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~ 155 (768)
T 3rgz_A 76 LTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEV 155 (768)
T ss_dssp CTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSE
T ss_pred cCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCE
Confidence 4678889999999999999999988 89999999999999999988887765 55666666
Q ss_pred EecCCCCCCCCCCcc-------------------------ccCCCCCCeeeccCCccCCcCCccccCccccceeeecccc
Q 037197 143 VNASSNNFSGFLPED-------------------------LGNATSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLSGNN 197 (1009)
Q Consensus 143 L~Ls~n~l~~~~p~~-------------------------l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~ 197 (1009)
|+|++|++++..|.. ++++++|++|+|++|.+.+.+|. ++++++|++|+|++|.
T Consensus 156 L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~ 234 (768)
T 3rgz_A 156 LDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNK 234 (768)
T ss_dssp EECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSC
T ss_pred EECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCc
Confidence 666666555433322 13455555555555655555554 5556666666666666
Q ss_pred ccccCCccCCCCcchhhhhccccccc----------------------ccCCccccCC-CCccEEEeccCccccccCccc
Q 037197 198 LTGKIPPELGQLSSLETIILGYNAFE----------------------GEIPAEFGNL-TNLRYLDLAVGSLSGQIPPAL 254 (1009)
Q Consensus 198 l~~~~p~~l~~l~~L~~L~L~~n~l~----------------------~~~~~~~~~l-~~L~~L~L~~n~l~~~~~~~l 254 (1009)
+++.+|..++.+++|++|+|++|+++ +.+|..+.++ ++|++|+|++|.+++.+|..|
T Consensus 235 l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~ 314 (768)
T 3rgz_A 235 LSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFF 314 (768)
T ss_dssp CCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGG
T ss_pred CCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHH
Confidence 65555555555555555555555544 4555555443 666666666666666666666
Q ss_pred CCCCCCcEEEcccCCcCCCCCcc-cccccccccccccccccCCCcchhhhccc-CCCeEeccccccCCCCCcCCCC--CC
Q 037197 255 GRLKKLTTVYLYKNNFTGKIPPE-LGSITSLAFLDLSDNQISGEIPVKLAELK-NLQLLNLMCNQLTGLIPDKLGE--LT 330 (1009)
Q Consensus 255 ~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~~~~~l~~--l~ 330 (1009)
+.+++|++|+|++|.+++.+|.. +..+++|++|+|++|++++.+|..+..++ +|++|++++|++++.+|..+.. ++
T Consensus 315 ~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 394 (768)
T 3rgz_A 315 GSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKN 394 (768)
T ss_dssp GGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTC
T ss_pred hcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccC
Confidence 66666666666666666555544 56666666666666666666666666665 6777777777766666666655 67
Q ss_pred cccEEEccCCccCccCCccccCCCCCceeeccCccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcc
Q 037197 331 KLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQ 410 (1009)
Q Consensus 331 ~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~ 410 (1009)
+|+.|++++|.+++.+|..+..+++|+.|++++|.+++.+|..+..+++|+.|++++|++++.+|..+..+++|++|+++
T Consensus 395 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 474 (768)
T 3rgz_A 395 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 474 (768)
T ss_dssp CCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECC
T ss_pred CccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEec
Confidence 78888888888888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCc
Q 037197 411 NNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKI 490 (1009)
Q Consensus 411 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 490 (1009)
+|++++.+|..+.++++|++|+|++|++++.+|..++.+++|+.|+|++|++++.+|..+..+++|+.|++++|++++.+
T Consensus 475 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~i 554 (768)
T 3rgz_A 475 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 554 (768)
T ss_dssp SSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBC
T ss_pred CCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998777
Q ss_pred cccc----------------------------------------------------------------------ccCCcC
Q 037197 491 PNEL----------------------------------------------------------------------QACPSL 500 (1009)
Q Consensus 491 p~~~----------------------------------------------------------------------~~l~~L 500 (1009)
|..+ +.+++|
T Consensus 555 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L 634 (768)
T 3rgz_A 555 PAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSM 634 (768)
T ss_dssp CGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCC
T ss_pred ChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccc
Confidence 7544 335789
Q ss_pred cEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCccccccccCcCcCCCCCCcEEecCCC
Q 037197 501 SVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASPALEMLNLSYN 580 (1009)
Q Consensus 501 ~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 580 (1009)
+.|||++|+++|.+|..|++++.|+.|+|++|+++|.+|..++++++|+.||||+|+++|.||..+..+++|++||||+|
T Consensus 635 ~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N 714 (768)
T 3rgz_A 635 MFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN 714 (768)
T ss_dssp CEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSS
T ss_pred cEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCcccccCCcccccCcCCCCCCCCCCCCCCC
Q 037197 581 KLEGPVPSNGILMNINPNELIGNAGLCGSVLPPCSQNLT 619 (1009)
Q Consensus 581 ~l~g~ip~~~~~~~~~~~~~~~n~~lcg~~~~~c~~~~~ 619 (1009)
+|+|+||.+++|++|+..+|.||+++||.|+++|.....
T Consensus 715 ~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~~~~ 753 (768)
T 3rgz_A 715 NLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPSNA 753 (768)
T ss_dssp EEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCSCC-
T ss_pred cccccCCCchhhccCCHHHhcCCchhcCCCCcCCCCCcc
Confidence 999999999999999999999999999999999976653
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.5e-66 Score=647.36 Aligned_cols=515 Identities=33% Similarity=0.495 Sum_probs=443.8
Q ss_pred ceeEEecccccccccccccc-ccCCCCCeEecccCcccccCCcc---c----------------------cccCccCccc
Q 037197 67 FVEKLDLSNMSLNGSVSENI-RGLRSLSSLNICCNEFASSLPKS---L----------------------ANLTALKSMD 120 (1009)
Q Consensus 67 ~v~~l~l~~~~l~~~~~~~l-~~l~~L~~L~L~~n~~~~~~~~~---l----------------------~~l~~L~~L~ 120 (1009)
+++.|||++|.+++.++..+ .++++|++|+|++|.+++..|.. + .++++|++|+
T Consensus 127 ~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~ 206 (768)
T 3rgz_A 127 GLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLD 206 (768)
T ss_dssp TCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEE
T ss_pred CCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEE
Confidence 45666666666666655543 55556666666665555544433 2 5566677777
Q ss_pred ccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCCcCCccccCccccceeeeccccccc
Q 037197 121 VSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLSGNNLTG 200 (1009)
Q Consensus 121 Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~ 200 (1009)
|++|.+.+.+|. ++++++|++|+|++|++++.+|..++++++|++|++++|.+.+.+|.. .+++|++|+|++|.+++
T Consensus 207 Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~ 283 (768)
T 3rgz_A 207 VSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTG 283 (768)
T ss_dssp CCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEE
T ss_pred CcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCC
Confidence 777777766665 777777777777777777777777777777777777777777666654 67788888888888888
Q ss_pred cCCccCCCC-cchhhhhcccccccccCCccccCCCCccEEEeccCccccccCcc-cCCCCCCcEEEcccCCcCCCCCccc
Q 037197 201 KIPPELGQL-SSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIPPA-LGRLKKLTTVYLYKNNFTGKIPPEL 278 (1009)
Q Consensus 201 ~~p~~l~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-l~~l~~L~~L~L~~n~l~~~~~~~~ 278 (1009)
.+|..+..+ ++|++|+|++|++++.+|..|+++++|++|++++|.+++.+|.. ++++++|++|+|++|.+++.+|..+
T Consensus 284 ~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l 363 (768)
T 3rgz_A 284 EIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESL 363 (768)
T ss_dssp SCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTH
T ss_pred ccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHH
Confidence 888888775 99999999999999999999999999999999999999888876 9999999999999999999999999
Q ss_pred cccc-ccccccccccccCCCcchhhhc--ccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCC
Q 037197 279 GSIT-SLAFLDLSDNQISGEIPVKLAE--LKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSP 355 (1009)
Q Consensus 279 ~~l~-~L~~L~Ls~N~l~~~~~~~l~~--l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 355 (1009)
..++ +|++|+|++|++++.+|..+.. +++|++|++++|++++.+|..+.++++|+.|++++|.+++.+|..++.+++
T Consensus 364 ~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 443 (768)
T 3rgz_A 364 TNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSK 443 (768)
T ss_dssp HHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTT
T ss_pred HhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCC
Confidence 9887 9999999999999888888877 788999999999999999999999999999999999999999999999999
Q ss_pred CceeeccCccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCccccccCCccCCCCcccEEEeec
Q 037197 356 LRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMAN 435 (1009)
Q Consensus 356 L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 435 (1009)
|+.|++++|.+++.+|..+..+++|+.|++++|++++.+|..+.++++|++|++++|++++.+|.+++.+++|++|+|++
T Consensus 444 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 523 (768)
T 3rgz_A 444 LRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSN 523 (768)
T ss_dssp CCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCS
T ss_pred CCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCcCCcCCCCCcEEecccCcccccCCCc----------------------------------------------
Q 037197 436 NNLTGQIPDDISLSTSLSFVDISWNHLESYLPSS---------------------------------------------- 469 (1009)
Q Consensus 436 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~---------------------------------------------- 469 (1009)
|+++|.+|..+..+++|+.|++++|++++.+|..
T Consensus 524 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (768)
T 3rgz_A 524 NSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQ 603 (768)
T ss_dssp SCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGG
T ss_pred CcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchh
Confidence 9999999999999999999999999988766654
Q ss_pred ------------------------ccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccce
Q 037197 470 ------------------------ILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLV 525 (1009)
Q Consensus 470 ------------------------~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~ 525 (1009)
+..+++|+.|++++|+++|.+|..++.+++|+.|||++|+++|.+|..|+++++|+
T Consensus 604 ~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~ 683 (768)
T 3rgz_A 604 LNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLN 683 (768)
T ss_dssp GGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCC
T ss_pred hhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCC
Confidence 33457889999999999999999999999999999999999999999999999999
Q ss_pred eeeecCcccccCCCcccccccccceecCCccccccccCcCcCCCCCCcEEecCCCc-cccC
Q 037197 526 SLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASPALEMLNLSYNK-LEGP 585 (1009)
Q Consensus 526 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~-l~g~ 585 (1009)
.|||++|+++|.+|..++.++.|+.||||+|+|+|.||.. +.+..+....+.+|+ |.|.
T Consensus 684 ~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 684 ILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp EEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGGGCSCTEEEST
T ss_pred EEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHHhcCCchhcCC
Confidence 9999999999999999999999999999999999999975 344555566677875 7774
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.6e-61 Score=595.01 Aligned_cols=556 Identities=21% Similarity=0.184 Sum_probs=486.1
Q ss_pred ceeeeEEeCC----------CCceeEEeccccccccccccccccCCCCCeEecccCcccccCCccccccCccCccccccc
Q 037197 55 CNWTGVWCNS----------RGFVEKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQN 124 (1009)
Q Consensus 55 C~w~gv~C~~----------~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n 124 (1009)
|.++.|.|+. ..+++.|+|+++.+++..+..+.++++|++|+|++|.+++..|..++++++|++|+|++|
T Consensus 4 ~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 4 VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred eECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 5566677743 146899999999999988888999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCCcCCccccCccccceeeeccccccccCCc
Q 037197 125 NFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLSGNNLTGKIPP 204 (1009)
Q Consensus 125 ~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~ 204 (1009)
.+++..+..++++++|++|+|++|++++..|..|+++++|++|++++|.+++..|..++++++|++|++++|.+++..+.
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 99876666799999999999999999988888999999999999999999999999999999999999999999987776
Q ss_pred cCC--CCcchhhhhcccccccccCCccccCC---------------------------CCccEEEeccCccccccCcccC
Q 037197 205 ELG--QLSSLETIILGYNAFEGEIPAEFGNL---------------------------TNLRYLDLAVGSLSGQIPPALG 255 (1009)
Q Consensus 205 ~l~--~l~~L~~L~L~~n~l~~~~~~~~~~l---------------------------~~L~~L~L~~n~l~~~~~~~l~ 255 (1009)
.++ .+++|++|++++|++++..|..|+.+ ++|++|++++|.+++..|..|.
T Consensus 164 ~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~ 243 (680)
T 1ziw_A 164 ELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFL 243 (680)
T ss_dssp HHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTG
T ss_pred HhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhh
Confidence 654 56899999999999999888877765 4567788888888888888888
Q ss_pred CCCC--CcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCCCeEeccccccCC-----CCC----c
Q 037197 256 RLKK--LTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTG-----LIP----D 324 (1009)
Q Consensus 256 ~l~~--L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~-----~~~----~ 324 (1009)
.++. |++|+|++|.+++..|..|..+++|++|+|++|++++..|..+..+++|++|++++|...+ .+| .
T Consensus 244 ~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~ 323 (680)
T 1ziw_A 244 GLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDF 323 (680)
T ss_dssp GGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTT
T ss_pred ccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChh
Confidence 7754 9999999999998888888899999999999999998888889999999999998876553 122 2
Q ss_pred CCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccc--cCCcCccC--CCCCceeecccccccccCCccccc
Q 037197 325 KLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSG--EIPTGLCD--SGNLTKLILFNNSFSGTFPVSLST 400 (1009)
Q Consensus 325 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~--~~~~~l~~--l~~L~~L~l~~N~l~~~~p~~l~~ 400 (1009)
.|..+++|++|++++|.+.+..+..+..+++|++|++++|.+.. .....|.. .+.|+.|++++|++++..|..+..
T Consensus 324 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~ 403 (680)
T 1ziw_A 324 SFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSW 403 (680)
T ss_dssp TTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTT
T ss_pred hcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhC
Confidence 67889999999999999999888889999999999999997543 22233333 258999999999999999999999
Q ss_pred CccccEEEcccCccccccC-CccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCccc--ccCCCcccCCcccc
Q 037197 401 CKSLVRVRVQNNLISGTIP-VGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLE--SYLPSSILSIPSLQ 477 (1009)
Q Consensus 401 ~~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~ 477 (1009)
+++|+.|++++|++++.+| ..+.++++|++|++++|++++..+..+..+++|+.|++++|.++ +..|..|..+++|+
T Consensus 404 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~ 483 (680)
T 1ziw_A 404 LGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLT 483 (680)
T ss_dssp CTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCC
T ss_pred CCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCC
Confidence 9999999999999987766 67899999999999999999888999999999999999999987 56889999999999
Q ss_pred hhccccCcccCCcccccccCCcCcEEEeecCCCCCCCC--------ccccccccceeeeecCcccccCCCcccccccccc
Q 037197 478 TFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIP--------ASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLA 549 (1009)
Q Consensus 478 ~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 549 (1009)
.|++++|++++..+..|..+++|+.|+|++|++++..+ ..|.++++|+.|+|++|+++...+..|.++++|+
T Consensus 484 ~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~ 563 (680)
T 1ziw_A 484 ILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELK 563 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred EEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcc
Confidence 99999999999888889999999999999999986422 3478899999999999999954455799999999
Q ss_pred eecCCccccccccCcCcCCCCCCcEEecCCCccccCCCCCC--cccccCCcccccCcCCCCCC
Q 037197 550 ILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEGPVPSNG--ILMNINPNELIGNAGLCGSV 610 (1009)
Q Consensus 550 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~--~~~~~~~~~~~~n~~lcg~~ 610 (1009)
.|||++|+|++..+..|..+++|+.|+|++|+|++.+|..- .+.++....+.+||+.|+++
T Consensus 564 ~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 564 IIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred eeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 99999999998888889999999999999999999877532 45666777889999999864
No 4
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5.5e-59 Score=566.49 Aligned_cols=494 Identities=18% Similarity=0.184 Sum_probs=345.4
Q ss_pred CCCeEecccCcccccCCccccccCccCcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeecc
Q 037197 91 SLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFR 170 (1009)
Q Consensus 91 ~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~ 170 (1009)
++++|+|++|.+++..|..|+++++|++|+|++|.+.+..|..++++++|++|+|++|++++..|..|+++++|++|+++
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 56777777777776666677777777777777777766666777777777777777777776667777777777777777
Q ss_pred CCccCCcCCccccCccccceeeeccccccccCCccCCCCcchhhhhcccccccccCCccccCCCCcc--EEEeccCcccc
Q 037197 171 GSFFEGSVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLR--YLDLAVGSLSG 248 (1009)
Q Consensus 171 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~--~L~L~~n~l~~ 248 (1009)
+|.+++..|..++++++|++|+|++|.+++..+..+..+++|++|++++|++++..|..|+.+++|+ .|++++|.+++
T Consensus 114 ~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~ 193 (606)
T 3t6q_A 114 QTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG 193 (606)
T ss_dssp TSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCE
T ss_pred ccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCc
Confidence 7777765566677777777777777777654333444477777777777777766666677777777 67777777776
Q ss_pred ccCcccCCCCCCcEEEcccCCc---------------------C-----CCCCccccccc--ccccccccccccCCCcch
Q 037197 249 QIPPALGRLKKLTTVYLYKNNF---------------------T-----GKIPPELGSIT--SLAFLDLSDNQISGEIPV 300 (1009)
Q Consensus 249 ~~~~~l~~l~~L~~L~L~~n~l---------------------~-----~~~~~~~~~l~--~L~~L~Ls~N~l~~~~~~ 300 (1009)
..|..+.. .+|+.|++++|.. . ...+..+..+. +|+.|++++|.+++..+.
T Consensus 194 ~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~ 272 (606)
T 3t6q_A 194 IEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSN 272 (606)
T ss_dssp ECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTT
T ss_pred cChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHH
Confidence 66555543 4666777666541 1 11112222222 577777777777766666
Q ss_pred hhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccCCcC-ccCCCC
Q 037197 301 KLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTG-LCDSGN 379 (1009)
Q Consensus 301 ~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~-l~~l~~ 379 (1009)
.|..+++|++|++++|+++ .+|..+.++++|++|++++|.+.+..|..+..+++|+.|++++|.+.+.+|.. +..+++
T Consensus 273 ~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~ 351 (606)
T 3t6q_A 273 TFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLEN 351 (606)
T ss_dssp TTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTT
T ss_pred HhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCc
Confidence 6777777777777777777 44666777777777777777777776777777777777777777776555443 667777
Q ss_pred CceeecccccccccC--CcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcC-CcCCCCCcEEe
Q 037197 380 LTKLILFNNSFSGTF--PVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDD-ISLSTSLSFVD 456 (1009)
Q Consensus 380 L~~L~l~~N~l~~~~--p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~ 456 (1009)
|++|++++|.+++.. +..+..+++|++|++++|++.+..|..+..+++|++|++++|++++..|.. +..+++|+.|+
T Consensus 352 L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 431 (606)
T 3t6q_A 352 LRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLN 431 (606)
T ss_dssp CCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEE
T ss_pred CCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEE
Confidence 777777777777655 666777777777777777777777777777777777777777777665543 67777777777
Q ss_pred cccCcccccCCCcccCCcccchhccccCcccCC---cccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcc
Q 037197 457 ISWNHLESYLPSSILSIPSLQTFMASHNNLQAK---IPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNR 533 (1009)
Q Consensus 457 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~---~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 533 (1009)
+++|.+++..|..+..+++|++|++++|++++. .+..+..+++|+.|+|++|++++..|..|..+++|+.|+|++|+
T Consensus 432 l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 511 (606)
T 3t6q_A 432 LSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNR 511 (606)
T ss_dssp CTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCc
Confidence 777777777777777777777777777777652 23457777777777777777777777777777777777777777
Q ss_pred cccCCCcccccccccceecCCccccccccCcCcCCCCCCcEEecCCCccccCCC
Q 037197 534 FSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEGPVP 587 (1009)
Q Consensus 534 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip 587 (1009)
+++.+|..+..++.| .|||++|++++.+|..+..+++|+.|++++|++++..+
T Consensus 512 l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 512 LTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp CCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred cCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 777777777777777 77777777777777777777777777777777776554
No 5
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.1e-58 Score=569.22 Aligned_cols=523 Identities=20% Similarity=0.206 Sum_probs=472.6
Q ss_pred CceeEEeccccccccccccccccCCCCCeEecccCcccccCCccccccCccCcccccccccCCCCCCCCCCCcCCeEEec
Q 037197 66 GFVEKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNA 145 (1009)
Q Consensus 66 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 145 (1009)
..++.|+|+++.+++..+..+.++++|++|+|++|.+++..+..|+++++|++|+|++|.+.+..|..++++++|++|+|
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 128 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEEC
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEEC
Confidence 46899999999999998999999999999999999998766668999999999999999999887889999999999999
Q ss_pred CCCCCCCCCCccccCCCCCCeeeccCCccCCcCCcccc--CccccceeeeccccccccCCccCCCC--------------
Q 037197 146 SSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVPTSFR--NLQKLKFLGLSGNNLTGKIPPELGQL-------------- 209 (1009)
Q Consensus 146 s~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~--~l~~L~~L~L~~n~l~~~~p~~l~~l-------------- 209 (1009)
++|.+++..|..++++++|++|++++|.+++..+..+. .+++|++|++++|.+++..|..+..+
T Consensus 129 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~ 208 (680)
T 1ziw_A 129 SHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLG 208 (680)
T ss_dssp CSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCH
T ss_pred CCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccC
Confidence 99999999999999999999999999999988777664 56899999999999998888777654
Q ss_pred -------------cchhhhhcccccccccCCccccCCCC--ccEEEeccCccccccCcccCCCCCCcEEEcccCCcCCCC
Q 037197 210 -------------SSLETIILGYNAFEGEIPAEFGNLTN--LRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKI 274 (1009)
Q Consensus 210 -------------~~L~~L~L~~n~l~~~~~~~~~~l~~--L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 274 (1009)
++|++|++++|.+++..|.+|.+++. |++|++++|++++..|..|+.+++|++|++++|.+++..
T Consensus 209 ~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 288 (680)
T 1ziw_A 209 PSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLF 288 (680)
T ss_dssp HHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEEC
T ss_pred hhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccC
Confidence 45678888999999999999998865 999999999999999999999999999999999999999
Q ss_pred CcccccccccccccccccccCC-----Ccch----hhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCcc
Q 037197 275 PPELGSITSLAFLDLSDNQISG-----EIPV----KLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGS 345 (1009)
Q Consensus 275 ~~~~~~l~~L~~L~Ls~N~l~~-----~~~~----~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 345 (1009)
|..|.++++|+.|++++|...+ .+|. .|..+++|++|++++|++++..+..|.++++|++|++++|.+...
T Consensus 289 ~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ 368 (680)
T 1ziw_A 289 SHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLR 368 (680)
T ss_dssp TTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCC
T ss_pred hhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhh
Confidence 9999999999999999886654 2332 688899999999999999999999999999999999999986432
Q ss_pred --CCccccC--CCCCceeeccCccccccCCcCccCCCCCceeecccccccccCC-cccccCccccEEEcccCccccccCC
Q 037197 346 --LPMRLGQ--SSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFP-VSLSTCKSLVRVRVQNNLISGTIPV 420 (1009)
Q Consensus 346 --~~~~~~~--~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p-~~l~~~~~L~~L~L~~N~l~~~~p~ 420 (1009)
....+.. .++|+.|++++|.+++..|..|..+++|+.|++++|.+++.+| ..+.++++|++|++++|++.+..+.
T Consensus 369 ~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 448 (680)
T 1ziw_A 369 TLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRN 448 (680)
T ss_dssp EECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTT
T ss_pred hcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChh
Confidence 2223333 2589999999999999999999999999999999999988666 6899999999999999999999999
Q ss_pred ccCCCCcccEEEeeccccc--ccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcc-------
Q 037197 421 GLGNLPSLQRLEMANNNLT--GQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIP------- 491 (1009)
Q Consensus 421 ~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p------- 491 (1009)
.|..+++|+.|++++|.++ +.+|..+..+++|+.|++++|+++++.+..|.++++|++|++++|++++..+
T Consensus 449 ~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 528 (680)
T 1ziw_A 449 SFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGP 528 (680)
T ss_dssp TTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSC
T ss_pred hhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCc
Confidence 9999999999999999987 6789999999999999999999999999999999999999999999986532
Q ss_pred -cccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCccccccccCcCcC-CC
Q 037197 492 -NELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFG-AS 569 (1009)
Q Consensus 492 -~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l 569 (1009)
..|..+++|+.|+|++|+++...+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++.+|..+. .+
T Consensus 529 ~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 608 (680)
T 1ziw_A 529 IYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAF 608 (680)
T ss_dssp CCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHH
T ss_pred chhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccc
Confidence 2478999999999999999966667799999999999999999977777789999999999999999999998887 78
Q ss_pred CCCcEEecCCCccccCCCC
Q 037197 570 PALEMLNLSYNKLEGPVPS 588 (1009)
Q Consensus 570 ~~L~~L~ls~N~l~g~ip~ 588 (1009)
++|+.|++++|++.+..+.
T Consensus 609 ~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 609 RNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TTCSEEECTTCCCCBCCCC
T ss_pred cccCEEEccCCCcccCCcc
Confidence 9999999999999998764
No 6
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-58 Score=580.79 Aligned_cols=518 Identities=21% Similarity=0.221 Sum_probs=315.2
Q ss_pred ceeeeEEeCCCCceeEEeccccccccccccccccCCCCCeEecccCcccccC-CccccccCccCcccccccccCCCCCCC
Q 037197 55 CNWTGVWCNSRGFVEKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSL-PKSLANLTALKSMDVSQNNFIGSFPTG 133 (1009)
Q Consensus 55 C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~-~~~l~~l~~L~~L~Ls~n~l~~~~p~~ 133 (1009)
|.|+.|.+ -...++.|||++|.+++..+..+.++++|++|+|++|.+.+.+ |.+|+++++|++|+|++|.+.+..|..
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~ 92 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDA 92 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTS
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhH
Confidence 45666665 4456667777777776666666777777777777766554444 556677777777777777766666666
Q ss_pred CCCCcCCeEEecCCCCCCCCCCcc--ccCCCCCCeeeccCCccCCcCC-ccccCccccceeeeccccccccCCccCCCC-
Q 037197 134 LGKASGLTSVNASSNNFSGFLPED--LGNATSLESLDFRGSFFEGSVP-TSFRNLQKLKFLGLSGNNLTGKIPPELGQL- 209 (1009)
Q Consensus 134 l~~l~~L~~L~Ls~n~l~~~~p~~--l~~l~~L~~L~L~~n~~~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l- 209 (1009)
++++++|++|+|++|.+++.+|.. ++++++|++|+|++|.+.+..+ ..|+++++|++|+|++|.+++..+..++.+
T Consensus 93 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~ 172 (844)
T 3j0a_A 93 FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQ 172 (844)
T ss_dssp SCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHH
T ss_pred ccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccccc
Confidence 777777777777777776655544 6667777777777776665543 456667777777777777766666666665
Q ss_pred -cchhhhhcccccccccCCccccCCCC------ccEEEeccCccccccCcccCCC---CCCcEEEcccC---------Cc
Q 037197 210 -SSLETIILGYNAFEGEIPAEFGNLTN------LRYLDLAVGSLSGQIPPALGRL---KKLTTVYLYKN---------NF 270 (1009)
Q Consensus 210 -~~L~~L~L~~n~l~~~~~~~~~~l~~------L~~L~L~~n~l~~~~~~~l~~l---~~L~~L~L~~n---------~l 270 (1009)
++|+.|+|+.|.+.+..|..++.+++ |++|++++|.+++..+..+... .+++.|.++.+ .+
T Consensus 173 ~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l 252 (844)
T 3j0a_A 173 GKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNI 252 (844)
T ss_dssp HCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSS
T ss_pred CCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccccc
Confidence 66777777777766666666555544 6677777776666665554432 45666665532 22
Q ss_pred CCCCCcccccc--cccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCc
Q 037197 271 TGKIPPELGSI--TSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPM 348 (1009)
Q Consensus 271 ~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 348 (1009)
.+..+..|.++ ++|+.|+|++|.+.+..+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|.+.+..+.
T Consensus 253 ~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 332 (844)
T 3j0a_A 253 KDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSS 332 (844)
T ss_dssp TTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSC
T ss_pred CCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHH
Confidence 22222233332 4566666666666655556666666666666666666666666666666666666666666666666
Q ss_pred cccCCCCCceeeccCccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCccccccCCccCCCCcc
Q 037197 349 RLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSL 428 (1009)
Q Consensus 349 ~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L 428 (1009)
.+..+++|+.|++++|.+.+..+..|..+++|+.|++++|.+++. ..+++|+.|++++|+++ .+|.. ..++
T Consensus 333 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~-~l~~~---~~~l 403 (844)
T 3j0a_A 333 NFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLV-TLPKI---NLTA 403 (844)
T ss_dssp SCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCC-CCCCC---CTTC
T ss_pred HhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcc-ccccc---cccc
Confidence 666666666666666666655555566666666666666666532 22556666666666665 33332 3455
Q ss_pred cEEEeecccccccCC-cCCcCCCCCcEEecccCcccccCCC-cccCCcccchhccccCccc-----CCcccccccCCcCc
Q 037197 429 QRLEMANNNLTGQIP-DDISLSTSLSFVDISWNHLESYLPS-SILSIPSLQTFMASHNNLQ-----AKIPNELQACPSLS 501 (1009)
Q Consensus 429 ~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~l~~N~l~-----~~~p~~~~~l~~L~ 501 (1009)
+.|++++|++++... ..+..+++|+.|+|++|++++..+. .+..+++|+.|++++|.++ +..+..|..+++|+
T Consensus 404 ~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~ 483 (844)
T 3j0a_A 404 NLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQ 483 (844)
T ss_dssp CEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEE
T ss_pred ceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCccccc
Confidence 666666666653211 1233556666666666666654332 2344566666666666665 23334556666666
Q ss_pred EEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCccccccccCcCcCCCCCCcEEecCCCc
Q 037197 502 VLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASPALEMLNLSYNK 581 (1009)
Q Consensus 502 ~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 581 (1009)
.|||++|+|++.+|..|..+++|+.|+|++|+|++..|..+. ++|+.|||++|+|++.+|..|. .|+.|++++|+
T Consensus 484 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L~~l~l~~Np 558 (844)
T 3j0a_A 484 VLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV---SLSVLDITHNK 558 (844)
T ss_dssp CCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS---SCCEEEEEEEC
T ss_pred EEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC---CcCEEEecCCC
Confidence 666666666666666666666666666666666655454444 5666666666666666665543 45666666666
Q ss_pred cccCCC
Q 037197 582 LEGPVP 587 (1009)
Q Consensus 582 l~g~ip 587 (1009)
+.+..+
T Consensus 559 ~~C~c~ 564 (844)
T 3j0a_A 559 FICECE 564 (844)
T ss_dssp CCCSSS
T ss_pred cccccc
Confidence 665554
No 7
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.4e-59 Score=571.25 Aligned_cols=484 Identities=21% Similarity=0.313 Sum_probs=309.8
Q ss_pred ccChHHhHHHHHHHHhhccCCCCC--------CCCCCCCCccccCCcCCcee---eeEEeCCCCceeEEecccccccccc
Q 037197 14 ESNADDELSTLLSIKAGLIDPLNM--------LEDWKMPSNAAENGLLHCNW---TGVWCNSRGFVEKLDLSNMSLNGSV 82 (1009)
Q Consensus 14 ~~~~~~~~~~ll~~k~~~~d~~~~--------l~~W~~~~~~~~~~~~~C~w---~gv~C~~~~~v~~l~l~~~~l~~~~ 82 (1009)
++....|+.||.+||+++.+|... ..+|+. +.+||.| .||+|+..|||++|+|++++++|.+
T Consensus 25 ~~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-------~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~l 97 (636)
T 4eco_A 25 TAEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-------NKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRV 97 (636)
T ss_dssp CCHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCC-------SSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEE
T ss_pred hhhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-------CCCcccccCCCCeEEcCCCCEEEEEecCcccCCcC
Confidence 344567999999999999765322 336863 3579999 9999988899999999999999999
Q ss_pred ccccccCCCCCeEecccCcc------cc------cCCccccccCccCcccccccccCCCCCCCCCC-CcCCeEEecC---
Q 037197 83 SENIRGLRSLSSLNICCNEF------AS------SLPKSLANLTALKSMDVSQNNFIGSFPTGLGK-ASGLTSVNAS--- 146 (1009)
Q Consensus 83 ~~~l~~l~~L~~L~L~~n~~------~~------~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~-l~~L~~L~Ls--- 146 (1009)
|+.+++|++|++|+|++|.+ .+ .+|... +..|+ ++++.|.+.+.+|..++. +..+..+++.
T Consensus 98 p~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~ 174 (636)
T 4eco_A 98 PDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKS 174 (636)
T ss_dssp CGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCC
T ss_pred ChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccc
Confidence 99999999999999999976 33 556555 67788 999999999988877763 2223333333
Q ss_pred -----------------CCCCCCCCCccccCCCCCCeeeccCCccCCc-----------------CCcccc--Cccccce
Q 037197 147 -----------------SNNFSGFLPEDLGNATSLESLDFRGSFFEGS-----------------VPTSFR--NLQKLKF 190 (1009)
Q Consensus 147 -----------------~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~-----------------~p~~~~--~l~~L~~ 190 (1009)
+|++++ +|..++++++|++|+|++|.+++. +|..++ ++++|++
T Consensus 175 ~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~ 253 (636)
T 4eco_A 175 IKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTD 253 (636)
T ss_dssp CCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCE
T ss_pred cccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCE
Confidence 456666 666666667777777776666664 666666 6666666
Q ss_pred eeeccccccccCCccCCCCcchhhhhccccc-ccc-cCCccccCC------CCccEEEeccCccccccCc--ccCCCCCC
Q 037197 191 LGLSGNNLTGKIPPELGQLSSLETIILGYNA-FEG-EIPAEFGNL------TNLRYLDLAVGSLSGQIPP--ALGRLKKL 260 (1009)
Q Consensus 191 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~-l~~-~~~~~~~~l------~~L~~L~L~~n~l~~~~~~--~l~~l~~L 260 (1009)
|+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..++++ ++|++|++++|+++ .+|. .++++++|
T Consensus 254 L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L 332 (636)
T 4eco_A 254 VEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKL 332 (636)
T ss_dssp EEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTC
T ss_pred EEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCC
Confidence 6666666666666666666666666666666 666 566666555 66666666666666 5565 66666666
Q ss_pred cEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccC-CCeEeccccccCCCCCcCCCCCC--cccEEEc
Q 037197 261 TTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKN-LQLLNLMCNQLTGLIPDKLGELT--KLEVLEL 337 (1009)
Q Consensus 261 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~-L~~L~L~~N~l~~~~~~~l~~l~--~L~~L~L 337 (1009)
++|++++|.++|.+| .+..+++|++|+|++|+++ .+|..+..+++ |++|++++|+++ .+|..+..++ +|+.|++
T Consensus 333 ~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~L 409 (636)
T 4eco_A 333 GMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDF 409 (636)
T ss_dssp CEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEEC
T ss_pred CEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEEC
Confidence 666666666666666 6666666666666666666 55666666666 666666666666 4455555433 5666666
Q ss_pred cCCccCccCCcccc-------CCCCCceeeccCccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcc
Q 037197 338 WKNSLIGSLPMRLG-------QSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQ 410 (1009)
Q Consensus 338 ~~N~l~~~~~~~~~-------~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~ 410 (1009)
++|.+++..|..+. .+.+|+.|++++|.+ ++..+..+..+++|++|+|+
T Consensus 410 s~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l------------------------~~lp~~~~~~l~~L~~L~Ls 465 (636)
T 4eco_A 410 SYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQI------------------------SKFPKELFSTGSPLSSINLM 465 (636)
T ss_dssp CSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCC------------------------CSCCTHHHHTTCCCSEEECC
T ss_pred cCCcCCCcchhhhcccccccccCCCCCEEECcCCcc------------------------CcCCHHHHccCCCCCEEECC
Confidence 66666655555554 444445555555544 42222223334555555555
Q ss_pred cCccccccCCccC--------CCCcccEEEeecccccccCCcCCc--CCCCCcEEecccCcccccCCCcccCCcccchhc
Q 037197 411 NNLISGTIPVGLG--------NLPSLQRLEMANNNLTGQIPDDIS--LSTSLSFVDISWNHLESYLPSSILSIPSLQTFM 480 (1009)
Q Consensus 411 ~N~l~~~~p~~~~--------~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 480 (1009)
+|+++ .+|..+. ++++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+
T Consensus 466 ~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~ 542 (636)
T 4eco_A 466 GNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFG 542 (636)
T ss_dssp SSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEE
T ss_pred CCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEE
Confidence 55555 3333221 1226666666666666 5555554 66666666666666665 455555556666665
Q ss_pred cccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCcccccc
Q 037197 481 ASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFG 560 (1009)
Q Consensus 481 l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 560 (1009)
+++|+ ++++|++.+.+|..+..+++|+.|+|++|+| +.+|..+. ++|+.|||++|++..
T Consensus 543 Ls~N~------------------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 543 IRNQR------------------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp CCSCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCE
T ss_pred CCCCc------------------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCcc
Confidence 55443 3345555555555555555555555555555 35555544 556666666665443
No 8
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=7e-58 Score=563.93 Aligned_cols=511 Identities=20% Similarity=0.279 Sum_probs=394.6
Q ss_pred hccChHHhHHHHHHHHhhccCCCCCCCCCCCCCccccCCcCCcee------------eeEEeCCCCceeEEecccccccc
Q 037197 13 VESNADDELSTLLSIKAGLIDPLNMLEDWKMPSNAAENGLLHCNW------------TGVWCNSRGFVEKLDLSNMSLNG 80 (1009)
Q Consensus 13 ~~~~~~~~~~~ll~~k~~~~d~~~~l~~W~~~~~~~~~~~~~C~w------------~gv~C~~~~~v~~l~l~~~~l~~ 80 (1009)
+++...+|+.||++||+++.|| +|+..........++|+| .||+|+..++|+.|+|++++++|
T Consensus 263 ~~~~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G 337 (876)
T 4ecn_A 263 ETAEYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKG 337 (876)
T ss_dssp CCCHHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEE
T ss_pred ccccchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCC
Confidence 3455678999999999999887 897543100111224999 99999988999999999999999
Q ss_pred ccccccccCCCCCeEec-ccCcccccCCcccccc----C-----ccCcc------cc-ccccc-----------CCCCCC
Q 037197 81 SVSENIRGLRSLSSLNI-CCNEFASSLPKSLANL----T-----ALKSM------DV-SQNNF-----------IGSFPT 132 (1009)
Q Consensus 81 ~~~~~l~~l~~L~~L~L-~~n~~~~~~~~~l~~l----~-----~L~~L------~L-s~n~l-----------~~~~p~ 132 (1009)
.+|+.|++|++|++|+| ++|.++|..|-..... + .++.. +. ....+ ....+.
T Consensus 338 ~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i 417 (876)
T 4ecn_A 338 RVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPI 417 (876)
T ss_dssp EECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCC
T ss_pred cCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccc
Confidence 99999999999999999 9999888744321111 0 00000 00 00000 000111
Q ss_pred CCCCCcCCeEEecCC--CCCCCCCCccccCCCCCCeeeccCCccCC-----------------cCCcccc--Ccccccee
Q 037197 133 GLGKASGLTSVNASS--NNFSGFLPEDLGNATSLESLDFRGSFFEG-----------------SVPTSFR--NLQKLKFL 191 (1009)
Q Consensus 133 ~l~~l~~L~~L~Ls~--n~l~~~~p~~l~~l~~L~~L~L~~n~~~~-----------------~~p~~~~--~l~~L~~L 191 (1009)
.......++.+.+.. |++++ +|..|+++++|++|+|++|.+++ .+|..++ ++++|++|
T Consensus 418 ~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L 496 (876)
T 4ecn_A 418 KKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDV 496 (876)
T ss_dssp CCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEE
T ss_pred ccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEE
Confidence 112233344444443 67776 77777777777777777777776 3777776 88888888
Q ss_pred eeccccccccCCccCCCCcchhhhhccccc-ccc-cCCccccCCC-------CccEEEeccCccccccCc--ccCCCCCC
Q 037197 192 GLSGNNLTGKIPPELGQLSSLETIILGYNA-FEG-EIPAEFGNLT-------NLRYLDLAVGSLSGQIPP--ALGRLKKL 260 (1009)
Q Consensus 192 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~-l~~-~~~~~~~~l~-------~L~~L~L~~n~l~~~~~~--~l~~l~~L 260 (1009)
+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..+++++ +|++|+|++|+++ .+|. .++++++|
T Consensus 497 ~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L 575 (876)
T 4ecn_A 497 ELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKL 575 (876)
T ss_dssp EEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTC
T ss_pred ECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCC
Confidence 888888888888888888888888888887 887 7777666655 8888888888888 7787 88888888
Q ss_pred cEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccC-CCeEeccccccCCCCCcCCCCCCc--ccEEEc
Q 037197 261 TTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKN-LQLLNLMCNQLTGLIPDKLGELTK--LEVLEL 337 (1009)
Q Consensus 261 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~-L~~L~L~~N~l~~~~~~~l~~l~~--L~~L~L 337 (1009)
+.|+|++|.++ .+| .|..+++|+.|+|++|+++ .+|..+..+++ |+.|+|++|+++ .+|..+..++. |+.|++
T Consensus 576 ~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~L 651 (876)
T 4ecn_A 576 GLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDF 651 (876)
T ss_dssp CEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEEC
T ss_pred CEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEEC
Confidence 89999888888 777 7888888999999998888 78888888888 999999999888 56777776654 889999
Q ss_pred cCCccCccCCccc---c--CCCCCceeeccCccccccCCcCc-cCCCCCceeecccccccccCCcccc--------cCcc
Q 037197 338 WKNSLIGSLPMRL---G--QSSPLRRLDASSNLLSGEIPTGL-CDSGNLTKLILFNNSFSGTFPVSLS--------TCKS 403 (1009)
Q Consensus 338 ~~N~l~~~~~~~~---~--~~~~L~~L~Ls~N~l~~~~~~~l-~~l~~L~~L~l~~N~l~~~~p~~l~--------~~~~ 403 (1009)
++|.+.+.+|... . ...+|+.|++++|.++ .+|..+ ..+++|+.|+|++|+++ .+|..+. ++++
T Consensus 652 s~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~ 729 (876)
T 4ecn_A 652 SYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYL 729 (876)
T ss_dssp CSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGG
T ss_pred cCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCC
Confidence 9998887665332 2 3347889999999998 455554 47888999999999998 4554433 3349
Q ss_pred ccEEEcccCccccccCCccC--CCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhcc
Q 037197 404 LVRVRVQNNLISGTIPVGLG--NLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMA 481 (1009)
Q Consensus 404 L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 481 (1009)
|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+|++|+ ++
T Consensus 730 L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~------------------~l 789 (876)
T 4ecn_A 730 LTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR------------------DA 789 (876)
T ss_dssp CCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB------------------CT
T ss_pred ccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC------------------Cc
Confidence 999999999999 7888887 99999999999999997 79899999999999999987 56
Q ss_pred ccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCccccc
Q 037197 482 SHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLF 559 (1009)
Q Consensus 482 ~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 559 (1009)
++|++.+.+|..|..+++|+.|+|++|+| +.+|..+. ++|+.|+|++|++....+..+.....+..+.|++|++.
T Consensus 790 s~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 790 EGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp TCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred ccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCcc
Confidence 78888888898999999999999999999 57888765 58999999999988777777777777888888888765
No 9
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.9e-57 Score=552.90 Aligned_cols=504 Identities=19% Similarity=0.175 Sum_probs=456.9
Q ss_pred eeeEEeCCC----------CceeEEeccccccccccccccccCCCCCeEecccCcccccCCccccccCccCccccccccc
Q 037197 57 WTGVWCNSR----------GFVEKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNF 126 (1009)
Q Consensus 57 w~gv~C~~~----------~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l 126 (1009)
+.-|.|... ..++.|||++|.+++..+..+.++++|++|+|++|.+++..|..|+++++|++|+|++|.+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 455888542 3589999999999998888999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCCcCCccccCccccceeeeccccccccCCccC
Q 037197 127 IGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLSGNNLTGKIPPEL 206 (1009)
Q Consensus 127 ~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l 206 (1009)
++..|..++++++|++|+|++|++++..|..++++++|++|++++|.+.+..+..+..+++|++|++++|.+++..|..+
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 173 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDM 173 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHH
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhh
Confidence 99899999999999999999999998778889999999999999999997655556669999999999999998888889
Q ss_pred CCCcchh--hhhcccccccccCCccccCCCCccEEEeccCcccc--------------------------ccCcccCCCC
Q 037197 207 GQLSSLE--TIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSG--------------------------QIPPALGRLK 258 (1009)
Q Consensus 207 ~~l~~L~--~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~--------------------------~~~~~l~~l~ 258 (1009)
+.+++|+ +|++++|++++..|..|.. .+|++|++++|.... ..+..+..+.
T Consensus 174 ~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~ 252 (606)
T 3t6q_A 174 SSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLC 252 (606)
T ss_dssp HTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGG
T ss_pred hhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhh
Confidence 9999999 8999999999888877765 589999998875211 0111222222
Q ss_pred --CCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEE
Q 037197 259 --KLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLE 336 (1009)
Q Consensus 259 --~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 336 (1009)
+|+.|++++|.+++..+..|..+++|++|++++|+++ .+|..+..+++|++|++++|++++..|..+.++++|+.|+
T Consensus 253 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 331 (606)
T 3t6q_A 253 EMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLS 331 (606)
T ss_dssp GSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEE
T ss_pred cCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEE
Confidence 7899999999999888888999999999999999999 7888999999999999999999999899999999999999
Q ss_pred ccCCccCccCCc-cccCCCCCceeeccCccccccC--CcCccCCCCCceeecccccccccCCcccccCccccEEEcccCc
Q 037197 337 LWKNSLIGSLPM-RLGQSSPLRRLDASSNLLSGEI--PTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNL 413 (1009)
Q Consensus 337 L~~N~l~~~~~~-~~~~~~~L~~L~Ls~N~l~~~~--~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~ 413 (1009)
+++|.+.+.++. .+..+++|++|++++|.+++.. +..+..+++|++|++++|++.+..|..+..+++|++|++++|+
T Consensus 332 l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 411 (606)
T 3t6q_A 332 IKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTR 411 (606)
T ss_dssp CCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCC
T ss_pred CCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCc
Confidence 999999876665 4899999999999999999776 7889999999999999999999999999999999999999999
Q ss_pred cccccCCc-cCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCccccc---CCCcccCCcccchhccccCcccCC
Q 037197 414 ISGTIPVG-LGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESY---LPSSILSIPSLQTFMASHNNLQAK 489 (1009)
Q Consensus 414 l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~~~~~~~l~~L~~L~l~~N~l~~~ 489 (1009)
+++..|.. +..+++|++|++++|++++..|..+..+++|+.|++++|++++. .+..+..+++|+.|++++|++++.
T Consensus 412 l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 491 (606)
T 3t6q_A 412 LKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSI 491 (606)
T ss_dssp EECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEE
T ss_pred CCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCcc
Confidence 99876654 89999999999999999999999999999999999999999873 346789999999999999999999
Q ss_pred cccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCccccccccC
Q 037197 490 IPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIP 563 (1009)
Q Consensus 490 ~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 563 (1009)
.|..|..+++|+.|||++|++++..|..+.+++.| .|+|++|++++.+|..+..+++|+.|++++|++++..+
T Consensus 492 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 492 DQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred ChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 99999999999999999999999999999999999 99999999999999999999999999999999987655
No 10
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-56 Score=563.37 Aligned_cols=525 Identities=20% Similarity=0.228 Sum_probs=463.9
Q ss_pred EEeccccccccccccccccCCCCCeEecccCcccccCCccccccCccCcccccccccCCCC-CCCCCCCcCCeEEecCCC
Q 037197 70 KLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSF-PTGLGKASGLTSVNASSN 148 (1009)
Q Consensus 70 ~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~-p~~l~~l~~L~~L~Ls~n 148 (1009)
..|.++++++. +|. -.++|++|+|++|.+++..|..|.++++|++|||++|.+.+.+ |..++++++|++|+|++|
T Consensus 8 ~~dcs~~~L~~-vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 8 IAFYRFCNLTQ-VPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EEEESCCCSSC-CCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EEEccCCCCCC-CCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 45666777775 444 4578999999999999999999999999999999999877777 788999999999999999
Q ss_pred CCCCCCCccccCCCCCCeeeccCCccCCcCCcc--ccCccccceeeeccccccccCC-ccCCCCcchhhhhccccccccc
Q 037197 149 NFSGFLPEDLGNATSLESLDFRGSFFEGSVPTS--FRNLQKLKFLGLSGNNLTGKIP-PELGQLSSLETIILGYNAFEGE 225 (1009)
Q Consensus 149 ~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~--~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~n~l~~~ 225 (1009)
++++..|..|+++++|++|+|++|.+.+.+|.. |+++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++.
T Consensus 84 ~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~ 163 (844)
T 3j0a_A 84 KIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLV 163 (844)
T ss_dssp CCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCC
T ss_pred cCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCee
Confidence 999999999999999999999999999877665 9999999999999999997755 5799999999999999999999
Q ss_pred CCccccCC--CCccEEEeccCccccccCcccCCCCC------CcEEEcccCCcCCCCCcccccc---ccccccccc----
Q 037197 226 IPAEFGNL--TNLRYLDLAVGSLSGQIPPALGRLKK------LTTVYLYKNNFTGKIPPELGSI---TSLAFLDLS---- 290 (1009)
Q Consensus 226 ~~~~~~~l--~~L~~L~L~~n~l~~~~~~~l~~l~~------L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~Ls---- 290 (1009)
.+..|+.+ ++|+.|+++.|.+.+..|..++.+.+ |+.|++++|.+++..+..+... .+++.|+++
T Consensus 164 ~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~ 243 (844)
T 3j0a_A 164 CEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIM 243 (844)
T ss_dssp CSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCC
T ss_pred CHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccc
Confidence 99999988 89999999999999988888777765 9999999999998888877653 567777776
Q ss_pred -----ccccCCCcchhhhcc--cCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccC
Q 037197 291 -----DNQISGEIPVKLAEL--KNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASS 363 (1009)
Q Consensus 291 -----~N~l~~~~~~~l~~l--~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~ 363 (1009)
.|.+.+..+..|..+ ++|+.|++++|.+++..+..|..+++|+.|+|++|.+.+..+..+..+++|+.|++++
T Consensus 244 ~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~ 323 (844)
T 3j0a_A 244 GAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSY 323 (844)
T ss_dssp BCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEES
T ss_pred cccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCC
Confidence 344444445556654 7899999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCC
Q 037197 364 NLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIP 443 (1009)
Q Consensus 364 N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 443 (1009)
|.+++..|..|..+++|+.|++++|++++..+..+.++++|+.|++++|.+++ +..+++|+.|++++|+++ .+|
T Consensus 324 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-----i~~~~~L~~L~l~~N~l~-~l~ 397 (844)
T 3j0a_A 324 NLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT-----IHFIPSIPDIFLSGNKLV-TLP 397 (844)
T ss_dssp CCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC-----CSSCCSCSEEEEESCCCC-CCC
T ss_pred CCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc-----ccCCCCcchhccCCCCcc-ccc
Confidence 99998889999999999999999999999888899999999999999999983 333889999999999998 566
Q ss_pred cCCcCCCCCcEEecccCcccccCC-CcccCCcccchhccccCcccCCccc-ccccCCcCcEEEeecCCCC-----CCCCc
Q 037197 444 DDISLSTSLSFVDISWNHLESYLP-SSILSIPSLQTFMASHNNLQAKIPN-ELQACPSLSVLDLSSNSLS-----GEIPA 516 (1009)
Q Consensus 444 ~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~LdLs~N~l~-----~~~p~ 516 (1009)
.. ..+++.|++++|++++... ..+..+++|+.|++++|++++..+. .+..+++|+.|+|++|.++ +..|.
T Consensus 398 ~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~ 474 (844)
T 3j0a_A 398 KI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWD 474 (844)
T ss_dssp CC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSS
T ss_pred cc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchh
Confidence 54 5689999999999998533 2356899999999999999976543 4667899999999999997 45567
Q ss_pred cccccccceeeeecCcccccCCCcccccccccceecCCccccccccCcCcCCCCCCcEEecCCCccccCCCCCCcccccC
Q 037197 517 SIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEGPVPSNGILMNIN 596 (1009)
Q Consensus 517 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~ 596 (1009)
.|..+++|+.|+|++|+|++.+|..|..+++|+.|||++|+|++.+|..+. ++|+.|||++|+|+|.+|.. |..+.
T Consensus 475 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~ 550 (844)
T 3j0a_A 475 VFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLS 550 (844)
T ss_dssp CSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCC
T ss_pred hhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcC
Confidence 788999999999999999999999999999999999999999998888876 89999999999999999964 66777
Q ss_pred CcccccCcCCCCCCC
Q 037197 597 PNELIGNAGLCGSVL 611 (1009)
Q Consensus 597 ~~~~~~n~~lcg~~~ 611 (1009)
...+.+||..|.+++
T Consensus 551 ~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 551 VLDITHNKFICECEL 565 (844)
T ss_dssp EEEEEEECCCCSSSC
T ss_pred EEEecCCCccccccc
Confidence 778899999996653
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.2e-57 Score=552.43 Aligned_cols=512 Identities=20% Similarity=0.202 Sum_probs=439.8
Q ss_pred CceeEEeccccccccccccccccCCCCCeEecccCcccccCCccccccCccCcccccccccCCCCCCCCCCCcCCeEEec
Q 037197 66 GFVEKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNA 145 (1009)
Q Consensus 66 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 145 (1009)
..++.|+|++|.+++..+..+.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..++++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 45889999999998887778999999999999999998888888999999999999999998888889999999999999
Q ss_pred CCCCCCCCCCccccCCCCCCeeeccCCccCC-cCCccccCccccceeeeccccccccCCccCCCCcchh----hhhcccc
Q 037197 146 SSNNFSGFLPEDLGNATSLESLDFRGSFFEG-SVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSLE----TIILGYN 220 (1009)
Q Consensus 146 s~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~----~L~L~~n 220 (1009)
++|++++..+..++++++|++|++++|.+.+ .+|..|+++++|++|+|++|++++..|..++.+++|+ +|++++|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 9999987777889999999999999999886 5688899999999999999999988888888887776 6899999
Q ss_pred cccccCCccccCCCCccEEEeccCccc-cccCcccCCCCCCcEEEcccCCcCCC------CCccccccc--ccccccc-c
Q 037197 221 AFEGEIPAEFGNLTNLRYLDLAVGSLS-GQIPPALGRLKKLTTVYLYKNNFTGK------IPPELGSIT--SLAFLDL-S 290 (1009)
Q Consensus 221 ~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~l~~l~~L~~L~L~~n~l~~~------~~~~~~~l~--~L~~L~L-s 290 (1009)
.+++..+..+... +|++|++++|.++ +..|..+++++.|+.+++..+.+.+. .+..+..+. +++.+++ .
T Consensus 192 ~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 270 (606)
T 3vq2_A 192 PIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTY 270 (606)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECC
T ss_pred CcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccc
Confidence 9986666666555 8999999999886 45677788889999888876554421 111122222 4556666 6
Q ss_pred ccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccC
Q 037197 291 DNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEI 370 (1009)
Q Consensus 291 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~ 370 (1009)
.|.+.+.+|. +..+++|+.|++++|.++.. | .+..+++|+.|++++|.+ +.+| .+ .++.|+.|++++|...+..
T Consensus 271 ~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l-~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~ 344 (606)
T 3vq2_A 271 TNDFSDDIVK-FHCLANVSAMSLAGVSIKYL-E-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF 344 (606)
T ss_dssp CTTCCGGGGS-CGGGTTCSEEEEESCCCCCC-C-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC
T ss_pred cccccccccc-cccCCCCCEEEecCccchhh-h-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch
Confidence 7788877777 89999999999999999765 4 788999999999999999 6777 44 8899999999999665444
Q ss_pred CcCccCCCCCceeeccccccccc--CCcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCC-cCCc
Q 037197 371 PTGLCDSGNLTKLILFNNSFSGT--FPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIP-DDIS 447 (1009)
Q Consensus 371 ~~~l~~l~~L~~L~l~~N~l~~~--~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~ 447 (1009)
.+..+++|++|++++|++++. .|..+..+++|++|++++|.+++ +|..+..+++|+.|++++|++++..| ..+.
T Consensus 345 --~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 421 (606)
T 3vq2_A 345 --KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFL 421 (606)
T ss_dssp --CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTT
T ss_pred --hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhh
Confidence 667889999999999999876 48888999999999999999984 66889999999999999999998877 6889
Q ss_pred CCCCCcEEecccCcccccCCCcccCCcccchhccccCcccC-CcccccccCCcCcEEEeecCCCCCCCCcccccccccee
Q 037197 448 LSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQA-KIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVS 526 (1009)
Q Consensus 448 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~ 526 (1009)
.+++|+.|++++|++++..|..+..+++|++|++++|++++ .+|..++.+++|+.|+|++|++++..|..|..+++|++
T Consensus 422 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 501 (606)
T 3vq2_A 422 SLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQL 501 (606)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred ccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCE
Confidence 99999999999999999999999999999999999999998 47889999999999999999999999999999999999
Q ss_pred eeecCcccccCCCcccccccccceecCCccccccccCcCcCCCC-CCcEEecCCCccccCCCC
Q 037197 527 LNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASP-ALEMLNLSYNKLEGPVPS 588 (1009)
Q Consensus 527 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~ls~N~l~g~ip~ 588 (1009)
|+|++|++++.+|..+..+++|+.|||++|+|+ .+|..+..++ +|++|++++|++.+..|.
T Consensus 502 L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 502 LNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp EECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred EECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 999999999988999999999999999999998 6777788887 599999999999987764
No 12
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=9e-56 Score=538.22 Aligned_cols=487 Identities=20% Similarity=0.203 Sum_probs=436.1
Q ss_pred CceeEEeccccccccccccccccCCCCCeEecccCcccccCCccccccCccCcccccccccCCCCCCCCCCCcCCeEEec
Q 037197 66 GFVEKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNA 145 (1009)
Q Consensus 66 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 145 (1009)
..++.|+|++|.+++..+..+.++++|++|+|++|.+++..|..|+++++|++|+|++|.+.+..|..++++++|++|+|
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 135 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEEC
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeC
Confidence 46899999999999988889999999999999999999999999999999999999999999888889999999999999
Q ss_pred CCCCCCC-CCCccccCCCCCCeeeccCCccCCcCCccccCccccc----eeeeccccccccCCccCCCCcchhhhhcccc
Q 037197 146 SSNNFSG-FLPEDLGNATSLESLDFRGSFFEGSVPTSFRNLQKLK----FLGLSGNNLTGKIPPELGQLSSLETIILGYN 220 (1009)
Q Consensus 146 s~n~l~~-~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~----~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 220 (1009)
++|.+.+ .+|..++++++|++|++++|.+++..|..|+.+++|+ +|++++|.+++..+..+... +|++|++++|
T Consensus 136 ~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n 214 (606)
T 3vq2_A 136 AHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGN 214 (606)
T ss_dssp CSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESC
T ss_pred CCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCC
Confidence 9999986 6799999999999999999999998898898888776 79999999996666655554 9999999999
Q ss_pred ccc-ccCCccccCCCCccEEEeccCccccc------cCcccCCCC--CCcEEEc-ccCCcCCCCCccccccccccccccc
Q 037197 221 AFE-GEIPAEFGNLTNLRYLDLAVGSLSGQ------IPPALGRLK--KLTTVYL-YKNNFTGKIPPELGSITSLAFLDLS 290 (1009)
Q Consensus 221 ~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~------~~~~l~~l~--~L~~L~L-~~n~l~~~~~~~~~~l~~L~~L~Ls 290 (1009)
.++ +..|..++++++|+.+++..+.+.+. .+..+..+. .++.+++ ..|.+.+.+|. +..+++|+.|+++
T Consensus 215 ~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~ 293 (606)
T 3vq2_A 215 FNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLA 293 (606)
T ss_dssp CSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEE
T ss_pred ccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEec
Confidence 987 46788899999999999876554421 112223322 4667777 77888888887 8999999999999
Q ss_pred ccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCcccccc-
Q 037197 291 DNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGE- 369 (1009)
Q Consensus 291 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~- 369 (1009)
+|.+. .+| .+..+++|+.|++++|++ +.+| .+ .+++|+.|++++|...+.. .+..+++|++|++++|.+++.
T Consensus 294 ~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~ 366 (606)
T 3vq2_A 294 GVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSG 366 (606)
T ss_dssp SCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEE
T ss_pred Cccch-hhh-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCc
Confidence 99997 566 889999999999999999 5667 45 9999999999999766544 677899999999999999876
Q ss_pred -CCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCccccccC-CccCCCCcccEEEeecccccccCCcCCc
Q 037197 370 -IPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIP-VGLGNLPSLQRLEMANNNLTGQIPDDIS 447 (1009)
Q Consensus 370 -~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 447 (1009)
.|..+..+++|++|++++|.+++ +|..+..+++|+.|++++|++.+..| ..+..+++|++|++++|++++..|..+.
T Consensus 367 ~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 445 (606)
T 3vq2_A 367 CCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFL 445 (606)
T ss_dssp ECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTT
T ss_pred chhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhc
Confidence 38888999999999999999985 56899999999999999999998888 6899999999999999999999999999
Q ss_pred CCCCCcEEecccCcccc-cCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCcccccccccee
Q 037197 448 LSTSLSFVDISWNHLES-YLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVS 526 (1009)
Q Consensus 448 ~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~ 526 (1009)
.+++|+.|++++|++++ .+|..|..+++|+.|++++|++++..|..|..+++|+.|+|++|++++.+|..|..+++|+.
T Consensus 446 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 525 (606)
T 3vq2_A 446 GLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLST 525 (606)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCE
T ss_pred CCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCE
Confidence 99999999999999998 57999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCcccccCCCccccccc-ccceecCCccccccccC
Q 037197 527 LNLRNNRFSGEIPKAVATMP-TLAILDMSNNSLFGRIP 563 (1009)
Q Consensus 527 L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p 563 (1009)
|+|++|+|+ .+|..+..++ +|+.|++++|++.+..+
T Consensus 526 L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 526 LDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp EECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred EECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 999999999 7888899997 59999999999987555
No 13
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-52 Score=507.24 Aligned_cols=492 Identities=18% Similarity=0.176 Sum_probs=390.3
Q ss_pred CCCCeEecccCcccccCCccccccCccCcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeec
Q 037197 90 RSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDF 169 (1009)
Q Consensus 90 ~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 169 (1009)
+++++|+|++|.+++..+.+|.++++|++|||++|++++..|..++++++|++|+|++|++++..|..|+++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46777888888887777777888888888888888777766677778888888888888887766777888888888888
Q ss_pred cCCccCCcCCccccCccccceeeeccccccc-cCCccCCCCcchhhhhcccccccccCCccccCCCCc----cEEEeccC
Q 037197 170 RGSFFEGSVPTSFRNLQKLKFLGLSGNNLTG-KIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNL----RYLDLAVG 244 (1009)
Q Consensus 170 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L----~~L~L~~n 244 (1009)
++|.+++..+..|+++++|++|++++|.+++ .+|..|+++++|++|++++|++++..+..|+.+++| ++|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 8888776555567788888888888887775 357778888888888888888877777777777777 77888888
Q ss_pred ccccccCcccCCCCCCcEEEcccCCcCC-CCCcccccccccccccccccccC------CCcchhhhccc--CCCeEeccc
Q 037197 245 SLSGQIPPALGRLKKLTTVYLYKNNFTG-KIPPELGSITSLAFLDLSDNQIS------GEIPVKLAELK--NLQLLNLMC 315 (1009)
Q Consensus 245 ~l~~~~~~~l~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~------~~~~~~l~~l~--~L~~L~L~~ 315 (1009)
.+++..+..+..+ +|+.|++++|.... .++..+..++.++.+.+..+.+. ......+..+. .++.+++++
T Consensus 188 ~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 188 PMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence 8877777776655 68888887774432 12334445555555554433222 11122333333 256677777
Q ss_pred c-ccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccCCcCccCCCCCceeecccccccccC
Q 037197 316 N-QLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTF 394 (1009)
Q Consensus 316 N-~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~ 394 (1009)
| .+.+..+..+..+++|+.|++++|.+. .+|..+..+ .|+.|++++|.+. .+|. ..+++|+.|++++|.+.+..
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~ 341 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAF 341 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBC
T ss_pred chhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccc
Confidence 7 777777888888888888888888877 467777777 8888888888887 5554 46778899999998887766
Q ss_pred CcccccCccccEEEcccCcccccc--CCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCC-Cccc
Q 037197 395 PVSLSTCKSLVRVRVQNNLISGTI--PVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLP-SSIL 471 (1009)
Q Consensus 395 p~~l~~~~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~ 471 (1009)
+. ..+++|++|++++|++++.. |..+..+++|++|++++|++++..+. +..+++|+.|++++|++++..+ ..+.
T Consensus 342 ~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~ 418 (570)
T 2z63_A 342 SE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFL 418 (570)
T ss_dssp CC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTT
T ss_pred cc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhh
Confidence 55 77889999999999988654 67788899999999999999865554 8889999999999999988766 5788
Q ss_pred CCcccchhccccCcccCCcccccccCCcCcEEEeecCCCC-CCCCccccccccceeeeecCcccccCCCcccccccccce
Q 037197 472 SIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLS-GEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAI 550 (1009)
Q Consensus 472 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 550 (1009)
.+++|+.|++++|.+.+..|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|+|++|++++..|..|..+++|+.
T Consensus 419 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 498 (570)
T 2z63_A 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 498 (570)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCE
Confidence 9999999999999999989999999999999999999998 578999999999999999999999988999999999999
Q ss_pred ecCCccccccccCcCcCCCCCCcEEecCCCccccCCCCCC
Q 037197 551 LDMSNNSLFGRIPENFGASPALEMLNLSYNKLEGPVPSNG 590 (1009)
Q Consensus 551 L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~ 590 (1009)
|+|++|++++.+|..|..+++|+.|++++|+++|.+|...
T Consensus 499 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~ 538 (570)
T 2z63_A 499 LNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 538 (570)
T ss_dssp EECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred EeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchH
Confidence 9999999999999999999999999999999999998743
No 14
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.1e-51 Score=496.24 Aligned_cols=493 Identities=19% Similarity=0.248 Sum_probs=376.0
Q ss_pred CceeeeEEeCCCCceeEEeccccccccccccccccCCCCCeEecccCcccccCCccccccCccCcccccccccCCCCCCC
Q 037197 54 HCNWTGVWCNSRGFVEKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTG 133 (1009)
Q Consensus 54 ~C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~ 133 (1009)
.|.|.|| |+. ++++++ .+|+.+. ++|++|+|++|.+++..|..++++++|++|+|++|++++..|..
T Consensus 3 ~C~~~~~-c~~---------~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~ 69 (549)
T 2z81_A 3 SCDASGV-CDG---------RSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDA 69 (549)
T ss_dssp EECTTSE-EEC---------TTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTT
T ss_pred cCCCCce-EEC---------CCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhh
Confidence 4999998 854 445555 3555543 78999999999999988999999999999999999999888899
Q ss_pred CCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCC-cCCccccCccccceeeeccccccccCC-ccCCCCcc
Q 037197 134 LGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEG-SVPTSFRNLQKLKFLGLSGNNLTGKIP-PELGQLSS 211 (1009)
Q Consensus 134 l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~ 211 (1009)
++.+++|++|+|++|++++..|..++++++|++|++++|.+++ ..|..++++++|++|++++|.+.+.+| ..|+++++
T Consensus 70 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~ 149 (549)
T 2z81_A 70 FYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTS 149 (549)
T ss_dssp TTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCE
T ss_pred ccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccc
Confidence 9999999999999999998888889999999999999999987 357789999999999999998544554 68999999
Q ss_pred hhhhhcccccccccCCccccCCCCccEEEeccCccccccCcccCCCCCCcEEEcccCCcCCCC--C-ccccccccccccc
Q 037197 212 LETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKI--P-PELGSITSLAFLD 288 (1009)
Q Consensus 212 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~--~-~~~~~l~~L~~L~ 288 (1009)
|++|++++|++++..|..++++++|++|+++.|.+.......+..+++|++|++++|++++.. | .....+++|+.|+
T Consensus 150 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~ 229 (549)
T 2z81_A 150 LNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLA 229 (549)
T ss_dssp EEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEE
T ss_pred cCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhccccee
Confidence 999999999999999999999999999999999987443333467899999999999998742 2 2234578899999
Q ss_pred ccccccCCCcchh----hhcccCCCeEeccccccCCCC------CcCCCCCCcccEEEccCCccCccCCccccCCCCCce
Q 037197 289 LSDNQISGEIPVK----LAELKNLQLLNLMCNQLTGLI------PDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRR 358 (1009)
Q Consensus 289 Ls~N~l~~~~~~~----l~~l~~L~~L~L~~N~l~~~~------~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~ 358 (1009)
+++|.+++..+.. +..+++|+.|++++|.+.+.. ...+..+.+|+.|++.++.+..... +.
T Consensus 230 l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~--~~------- 300 (549)
T 2z81_A 230 FRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYL--FY------- 300 (549)
T ss_dssp EESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGG--SC-------
T ss_pred ccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhh--cc-------
Confidence 9999988655543 356788999999999887642 1234556677777777665532110 00
Q ss_pred eeccCccccccCCcCccCCCCCceeecccccccccCCccc-ccCccccEEEcccCccccccC---CccCCCCcccEEEee
Q 037197 359 LDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSL-STCKSLVRVRVQNNLISGTIP---VGLGNLPSLQRLEMA 434 (1009)
Q Consensus 359 L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l-~~~~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~ 434 (1009)
..+..+...++|+.|++++|.+. .+|..+ ..+++|++|++++|++++.+| ..++.+++|++|+|+
T Consensus 301 ----------~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls 369 (549)
T 2z81_A 301 ----------DLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLS 369 (549)
T ss_dssp ----------CCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECT
T ss_pred ----------cchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEcc
Confidence 01111122345666666666665 344443 456666666666666665543 335666677777777
Q ss_pred cccccccCC--cCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCC
Q 037197 435 NNNLTGQIP--DDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSG 512 (1009)
Q Consensus 435 ~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~ 512 (1009)
+|++++..+ ..+..+++|++|++++|++++ +|..+..+++|+.|++++|+++. +|..+ .++|+.|||++|+|++
T Consensus 370 ~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~ 445 (549)
T 2z81_A 370 QNHLRSMQKTGEILLTLKNLTSLDISRNTFHP-MPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDS 445 (549)
T ss_dssp TSCCCCHHHHHHHGGGCTTCCEEECTTCCCCC-CCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSC
T ss_pred CCcccccccchhhhhcCCCCCEEECCCCCCcc-CChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhh
Confidence 777664322 345666777777777777764 55666667777777777777663 33333 2588999999999986
Q ss_pred CCCccccccccceeeeecCcccccCCCcccccccccceecCCccccccccCcCcCCCCCCcEEecCCCccccCCCCC
Q 037197 513 EIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEGPVPSN 589 (1009)
Q Consensus 513 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~ 589 (1009)
.+ ..+++|++|+|++|+|+ .+|. ...+++|+.|||++|++++.+|..|..+++|+.|++++|+++|.+|..
T Consensus 446 ~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 516 (549)
T 2z81_A 446 FS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 516 (549)
T ss_dssp CC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHHH
T ss_pred hc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCccH
Confidence 53 46889999999999998 6776 567999999999999999999999999999999999999999998853
No 15
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=8.5e-52 Score=502.82 Aligned_cols=451 Identities=20% Similarity=0.338 Sum_probs=377.1
Q ss_pred CccCcccccccccCCCCCCCCCCCcCCeEEecCCCCC------CC------CCCccccCCCCCCeeeccCCccCCcCCcc
Q 037197 114 TALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNF------SG------FLPEDLGNATSLESLDFRGSFFEGSVPTS 181 (1009)
Q Consensus 114 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l------~~------~~p~~l~~l~~L~~L~L~~n~~~~~~p~~ 181 (1009)
.+++.|+|++|++.|.+|.+++++++|++|+|++|.+ .+ .+|... +..|+ +++++|.+.+.+|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 4677788888888877887788888888888887765 22 233332 34444 555556555555554
Q ss_pred ccC-ccccceeeeccccccccCCccCCCCcchhhhhcc--cccccccCCccccCCCCccEEEeccCccccc---------
Q 037197 182 FRN-LQKLKFLGLSGNNLTGKIPPELGQLSSLETIILG--YNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQ--------- 249 (1009)
Q Consensus 182 ~~~-l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~--~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--------- 249 (1009)
+.. +.++..+++....+. ......++.+.++ .|++++ +|.+|+++++|++|+|++|++++.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~------~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~ 230 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIK------KSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENE 230 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCC------CCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCT
T ss_pred HHHHHHHHhhcCccccccc------cccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccccccc
Confidence 442 233333333332222 1122334444443 689998 899999999999999999999986
Q ss_pred --------cCcccC--CCCCCcEEEcccCCcCCCCCcccccccccccccccccc-cCC-Ccchhhhcc------cCCCeE
Q 037197 250 --------IPPALG--RLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQ-ISG-EIPVKLAEL------KNLQLL 311 (1009)
Q Consensus 250 --------~~~~l~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~-~~~~~l~~l------~~L~~L 311 (1009)
+|..++ ++++|++|+|++|.+.+.+|..++++++|++|+|++|+ +++ .+|..++.+ ++|++|
T Consensus 231 ~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L 310 (636)
T 4eco_A 231 NSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQII 310 (636)
T ss_dssp TSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEE
T ss_pred ccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEE
Confidence 999999 99999999999999999999999999999999999998 998 899988887 999999
Q ss_pred eccccccCCCCCc--CCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccCCcCccCCCC-Cceeecccc
Q 037197 312 NLMCNQLTGLIPD--KLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGN-LTKLILFNN 388 (1009)
Q Consensus 312 ~L~~N~l~~~~~~--~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~-L~~L~l~~N 388 (1009)
++++|+++ .+|. .++++++|+.|++++|.++|.+| .++.+++|+.|++++|.++ .+|..+..+++ |+.|++++|
T Consensus 311 ~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N 387 (636)
T 4eco_A 311 YIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHN 387 (636)
T ss_dssp ECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSS
T ss_pred ECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCC
Confidence 99999999 6787 89999999999999999999999 8999999999999999999 88899999999 999999999
Q ss_pred cccccCCcccccCc--cccEEEcccCccccccCCccC-------CCCcccEEEeecccccccCCcC-CcCCCCCcEEecc
Q 037197 389 SFSGTFPVSLSTCK--SLVRVRVQNNLISGTIPVGLG-------NLPSLQRLEMANNNLTGQIPDD-ISLSTSLSFVDIS 458 (1009)
Q Consensus 389 ~l~~~~p~~l~~~~--~L~~L~L~~N~l~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls 458 (1009)
+++ .+|..+..++ +|+.|++++|++++.+|..+. .+++|++|+|++|+++ .+|.. +..+++|+.|+|+
T Consensus 388 ~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls 465 (636)
T 4eco_A 388 KLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLM 465 (636)
T ss_dssp CCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECC
T ss_pred cCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECC
Confidence 999 7888887765 899999999999999999888 8889999999999999 45544 5568999999999
Q ss_pred cCcccccCCCcccCCc-------ccchhccccCcccCCcccccc--cCCcCcEEEeecCCCCCCCCccccccccceeeee
Q 037197 459 WNHLESYLPSSILSIP-------SLQTFMASHNNLQAKIPNELQ--ACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNL 529 (1009)
Q Consensus 459 ~N~l~~~~~~~~~~l~-------~L~~L~l~~N~l~~~~p~~~~--~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~L 529 (1009)
+|+++.+.+..+.... +|+.|++++|+++ .+|..+. .+++|+.|||++|++++ +|..+..+++|+.|+|
T Consensus 466 ~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~L 543 (636)
T 4eco_A 466 GNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGI 543 (636)
T ss_dssp SSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEEC
T ss_pred CCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEEC
Confidence 9999965555544333 9999999999999 6888887 99999999999999997 8999999999999999
Q ss_pred ------cCcccccCCCcccccccccceecCCccccccccCcCcCCCCCCcEEecCCCcccc
Q 037197 530 ------RNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEG 584 (1009)
Q Consensus 530 ------s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g 584 (1009)
++|++.+.+|..++.+++|+.|||++|++ +.+|..+. +.|+.|||++|++..
T Consensus 544 s~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 544 RNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp CSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCE
T ss_pred CCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCcc
Confidence 56889999999999999999999999999 78898876 799999999998764
No 16
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1e-50 Score=490.26 Aligned_cols=490 Identities=20% Similarity=0.189 Sum_probs=434.4
Q ss_pred CceeEEeccccccccccccccccCCCCCeEecccCcccccCCccccccCccCcccccccccCCCCCCCCCCCcCCeEEec
Q 037197 66 GFVEKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNA 145 (1009)
Q Consensus 66 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 145 (1009)
..++.|||++|.+++..+..+.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..++.+++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46899999999999888889999999999999999999988899999999999999999999888899999999999999
Q ss_pred CCCCCCCCCCccccCCCCCCeeeccCCccCC-cCCccccCccccceeeeccccccccCCccCCCCcch----hhhhcccc
Q 037197 146 SSNNFSGFLPEDLGNATSLESLDFRGSFFEG-SVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSL----ETIILGYN 220 (1009)
Q Consensus 146 s~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L----~~L~L~~n 220 (1009)
++|++++..+..++++++|++|++++|.+.+ .+|..|+++++|++|++++|.+++..|..++.+++| ++|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 9999997666679999999999999999987 479999999999999999999998888889999888 88999999
Q ss_pred cccccCCccccCCCCccEEEeccCcccc-ccCcccCCCCCCcEEEcccCCc------CCCCCccccccc--ccccccccc
Q 037197 221 AFEGEIPAEFGNLTNLRYLDLAVGSLSG-QIPPALGRLKKLTTVYLYKNNF------TGKIPPELGSIT--SLAFLDLSD 291 (1009)
Q Consensus 221 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~L~~n~l------~~~~~~~~~~l~--~L~~L~Ls~ 291 (1009)
.+++..|..|..+ +|++|++++|.... .++..+..+++++.+.+..+.+ .......+..+. .++.+++++
T Consensus 188 ~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 188 PMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence 9998888888877 89999999986442 3456677788888777654322 222223333333 356788888
Q ss_pred c-ccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccC
Q 037197 292 N-QISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEI 370 (1009)
Q Consensus 292 N-~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~ 370 (1009)
| .+.+..|..+..+++|+.|++++|.+++ +|..+..+ +|+.|++++|.+. .+|. ..+++|+.|++++|.+.+..
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~ 341 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAF 341 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBC
T ss_pred chhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccc
Confidence 8 7888889999999999999999999995 67788888 9999999999998 4444 57889999999999998766
Q ss_pred CcCccCCCCCceeecccccccccC--CcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCC-cCCc
Q 037197 371 PTGLCDSGNLTKLILFNNSFSGTF--PVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIP-DDIS 447 (1009)
Q Consensus 371 ~~~l~~l~~L~~L~l~~N~l~~~~--p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~ 447 (1009)
+. ..+++|+.|++++|++++.. |..+.++++|++|++++|.+.+..+. +..+++|+.|++++|++++..| ..+.
T Consensus 342 ~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~ 418 (570)
T 2z63_A 342 SE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFL 418 (570)
T ss_dssp CC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTT
T ss_pred cc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhh
Confidence 65 67899999999999998764 77889999999999999999965554 9999999999999999998766 5788
Q ss_pred CCCCCcEEecccCcccccCCCcccCCcccchhccccCccc-CCcccccccCCcCcEEEeecCCCCCCCCcccccccccee
Q 037197 448 LSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQ-AKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVS 526 (1009)
Q Consensus 448 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~ 526 (1009)
.+++|+.|++++|++++..|..|..+++|+.|++++|+++ +.+|..+..+++|+.|||++|++++..|..|..+++|+.
T Consensus 419 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 498 (570)
T 2z63_A 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 498 (570)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCE
Confidence 9999999999999999999999999999999999999998 578999999999999999999999999999999999999
Q ss_pred eeecCcccccCCCcccccccccceecCCccccccccCc
Q 037197 527 LNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPE 564 (1009)
Q Consensus 527 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 564 (1009)
|+|++|++++..|..|..+++|+.|++++|++++..|.
T Consensus 499 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 499 LNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp EECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred EeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 99999999998888999999999999999999998775
No 17
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.3e-50 Score=486.64 Aligned_cols=478 Identities=21% Similarity=0.225 Sum_probs=317.2
Q ss_pred EecccCcccccCCccccccCccCcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCcc
Q 037197 95 LNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFF 174 (1009)
Q Consensus 95 L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~ 174 (1009)
.+.+++.++ .+|+.+. ++|++|+|++|++++..|..++++++|++|+|++|++++..|..|+++++|++|+|++|.+
T Consensus 10 c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 86 (549)
T 2z81_A 10 CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHL 86 (549)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCcc
Confidence 344445543 3344332 4555555555555555555555555555555555555554445555555555555555555
Q ss_pred CCcCCccccCccccceeeeccccccccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEeccCccccccC-cc
Q 037197 175 EGSVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIP-PA 253 (1009)
Q Consensus 175 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~ 253 (1009)
++..|..|+++++|++|+|++|.+++. ..|..|+++++|++|++++|.+.+.+| ..
T Consensus 87 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~-----------------------~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~ 143 (549)
T 2z81_A 87 SSLSSSWFGPLSSLKYLNLMGNPYQTL-----------------------GVTSLFPNLTNLQTLRIGNVETFSEIRRID 143 (549)
T ss_dssp CSCCHHHHTTCTTCCEEECTTCCCSSS-----------------------CSSCSCTTCTTCCEEEEEESSSCCEECTTT
T ss_pred CccCHHHhccCCCCcEEECCCCccccc-----------------------chhhhhhccCCccEEECCCCccccccCHhh
Confidence 544444455555555555555555431 123344555555555555554222222 34
Q ss_pred cCCCCCCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchh-hhcccCCCeEeccccccCCCC---CcCCCCC
Q 037197 254 LGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVK-LAELKNLQLLNLMCNQLTGLI---PDKLGEL 329 (1009)
Q Consensus 254 l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-l~~l~~L~~L~L~~N~l~~~~---~~~l~~l 329 (1009)
|+++++|++|++++|.+++..|..+..+++|+.|++++|.+. .+|.. +..+++|++|++++|++++.. ......+
T Consensus 144 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~ 222 (549)
T 2z81_A 144 FAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVS 222 (549)
T ss_dssp TTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCC
T ss_pred hhcccccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhh
Confidence 555555555555555555555555555555555555555554 23332 234566666666666665532 1122345
Q ss_pred CcccEEEccCCccCccCCc----cccCCCCCceeeccCccccccC------CcCccCCCCCceeeccccccccc-----C
Q 037197 330 TKLEVLELWKNSLIGSLPM----RLGQSSPLRRLDASSNLLSGEI------PTGLCDSGNLTKLILFNNSFSGT-----F 394 (1009)
Q Consensus 330 ~~L~~L~L~~N~l~~~~~~----~~~~~~~L~~L~Ls~N~l~~~~------~~~l~~l~~L~~L~l~~N~l~~~-----~ 394 (1009)
++|+.|++++|.+++..+. .+..+..|+.+++++|.+.+.. ...+..+++|+.|++.++.+... +
T Consensus 223 ~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l 302 (549)
T 2z81_A 223 SPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDL 302 (549)
T ss_dssp CCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCC
T ss_pred hcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccc
Confidence 6666666666666553332 2345566777777777665421 22345677888888888876532 1
Q ss_pred CcccccCccccEEEcccCccccccCCcc-CCCCcccEEEeecccccccCC---cCCcCCCCCcEEecccCcccccCC--C
Q 037197 395 PVSLSTCKSLVRVRVQNNLISGTIPVGL-GNLPSLQRLEMANNNLTGQIP---DDISLSTSLSFVDISWNHLESYLP--S 468 (1009)
Q Consensus 395 p~~l~~~~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~~--~ 468 (1009)
+..+....+|+.|++++|++. .+|..+ ..+++|++|++++|++++.+| ..++.+++|+.|+|++|++++..+ .
T Consensus 303 ~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 381 (549)
T 2z81_A 303 STVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGE 381 (549)
T ss_dssp CHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHH
T ss_pred hhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchh
Confidence 222345678999999999998 677666 579999999999999998764 457889999999999999998643 5
Q ss_pred cccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCccccccccc
Q 037197 469 SILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTL 548 (1009)
Q Consensus 469 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 548 (1009)
.+..+++|++|++++|+++ .+|..+..+++|+.|+|++|++++ +|..+ .++|+.|+|++|+|++.+ ..+++|
T Consensus 382 ~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L 453 (549)
T 2z81_A 382 ILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRL 453 (549)
T ss_dssp HGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC----CCCTTC
T ss_pred hhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc----ccCChh
Confidence 6889999999999999999 578899999999999999999984 45443 268999999999999753 578999
Q ss_pred ceecCCccccccccCcCcCCCCCCcEEecCCCccccCCCCC-CcccccCCcccccCcCCCCCC
Q 037197 549 AILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEGPVPSN-GILMNINPNELIGNAGLCGSV 610 (1009)
Q Consensus 549 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~lcg~~ 610 (1009)
+.|||++|+|+ .+|. ...+++|++|||++|++++.+|.. ..+..+....+.+|+..|.++
T Consensus 454 ~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 454 QELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred cEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 99999999998 6776 567999999999999999988863 445566667788999988755
No 18
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.3e-49 Score=428.89 Aligned_cols=259 Identities=32% Similarity=0.481 Sum_probs=203.9
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEEe
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVYD 777 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~E 777 (1009)
+.++..+.||+|+||+||+|++.. .||||+++......+..+.+.+|++++++++|||||+++|++.+ +..++|||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 346678889999999999998764 58999997666666667778899999999999999999999865 46899999
Q ss_pred ccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecccC
Q 037197 778 YMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLHK 857 (1009)
Q Consensus 778 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~ 857 (1009)
||++|+|.++++.... .++|.++..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|+.....
T Consensus 112 y~~gGsL~~~l~~~~~---~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 112 WCEGSSLYKHLHVQET---KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CCSSCBHHHHHHTSCC---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred cCCCCCHHHHHhhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 9999999999976532 389999999999999999999998 9999999999999999999999999999876433
Q ss_pred C--CceeeecccCcccCCcccC---CCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccccc
Q 037197 858 N--ETVSMVAGSYGYIAPEYGY---TLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEAL 932 (1009)
Q Consensus 858 ~--~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1009)
. .......||+.|||||++. ...++.++|||||||++|||+||+.||.... ....+...+..+. .
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~-----~~~~~~~~~~~~~-----~ 255 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN-----NRDQIIFMVGRGY-----A 255 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CHHHHHHHHHTTC-----C
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC-----hHHHHHHHHhcCC-----C
Confidence 2 2344568999999999875 3468999999999999999999999997422 1223333333222 1
Q ss_pred CccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcC
Q 037197 933 DPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAK 979 (1009)
Q Consensus 933 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 979 (1009)
.|.+........ .++.+++.+||+.||++|||+.||++.|+.++
T Consensus 256 ~p~~~~~~~~~~---~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 256 SPDLSKLYKNCP---KAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp CCCSTTSCTTSC---HHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred CCCcccccccch---HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 222221112222 24567889999999999999999999998775
No 19
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.8e-49 Score=436.77 Aligned_cols=253 Identities=24% Similarity=0.349 Sum_probs=207.3
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEEe
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVYD 777 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~E 777 (1009)
++|+..+.||+|+||+||+|++..+|+.||||++.+........+.+.+|++++++++|||||++++++.+++.+|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 57899999999999999999999999999999998766666667778899999999999999999999999999999999
Q ss_pred ccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecccC
Q 037197 778 YMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLHK 857 (1009)
Q Consensus 778 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~ 857 (1009)
||+||+|.++++... ...+++.++..|+.||+.||+|||++ +||||||||+|||+++++.+||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~~--~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQK--GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp CCTTCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred CCCCCcHHHHHHHcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 999999999996543 22368888899999999999999999 9999999999999999999999999999876443
Q ss_pred CCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCcccc
Q 037197 858 NETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSIA 937 (1009)
Q Consensus 858 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (1009)
.......+||+.|||||++.+..|+.++|||||||++|||+||+.||.. .+..+.+........ +.+.
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~-----~~~~~~~~~i~~~~~-------~~~~ 246 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA-----GSMKNLVLKIISGSF-------PPVS 246 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC-----SSHHHHHHHHHHTCC-------CCCC
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-----cCHHHHHHHHHcCCC-------CCCC
Confidence 3344556899999999999999999999999999999999999999973 233333333332221 1111
Q ss_pred ccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 938 GQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 938 ~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
...+ .++.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~s------~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 247 LHYS------YDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp TTSC------HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ccCC------HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1111 24567889999999999999999975
No 20
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.7e-49 Score=487.52 Aligned_cols=463 Identities=23% Similarity=0.327 Sum_probs=388.0
Q ss_pred CCCCeEecccCcccccCCccccccCccCcccc-cccccCCCCCCCCCCC----cCC--eEEe----------cCCCCCCC
Q 037197 90 RSLSSLNICCNEFASSLPKSLANLTALKSMDV-SQNNFIGSFPTGLGKA----SGL--TSVN----------ASSNNFSG 152 (1009)
Q Consensus 90 ~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L-s~n~l~~~~p~~l~~l----~~L--~~L~----------Ls~n~l~~ 152 (1009)
.+++.|+|++|.+.|.+|++|++|++|++||| ++|.+.|..|-..... +.+ +.+. .....+++
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 46889999999999999999999999999999 8898887754321111 000 0000 00001110
Q ss_pred -----------CCCccccCCCCCCeeeccC--CccCCcCCccccCccccceeeeccccccc-----------------cC
Q 037197 153 -----------FLPEDLGNATSLESLDFRG--SFFEGSVPTSFRNLQKLKFLGLSGNNLTG-----------------KI 202 (1009)
Q Consensus 153 -----------~~p~~l~~l~~L~~L~L~~--n~~~~~~p~~~~~l~~L~~L~L~~n~l~~-----------------~~ 202 (1009)
..+........++.+.+.. |.+++ +|..|+++++|++|+|++|.+++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 0111112334556666655 88988 89999999999999999999998 39
Q ss_pred CccCC--CCcchhhhhcccccccccCCccccCCCCccEEEeccCc-ccc-ccCcccCCC-------CCCcEEEcccCCcC
Q 037197 203 PPELG--QLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGS-LSG-QIPPALGRL-------KKLTTVYLYKNNFT 271 (1009)
Q Consensus 203 p~~l~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~-~~~~~l~~l-------~~L~~L~L~~n~l~ 271 (1009)
|..++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..++++ ++|+.|+|++|.++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 99988 99999999999999999999999999999999999998 998 788766555 49999999999999
Q ss_pred CCCCc--ccccccccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCc-ccEEEccCCccCccCCc
Q 037197 272 GKIPP--ELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTK-LEVLELWKNSLIGSLPM 348 (1009)
Q Consensus 272 ~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~-L~~L~L~~N~l~~~~~~ 348 (1009)
.+|. .+.++++|+.|+|++|+++ .+| .+..+++|+.|+|++|+++ .+|..+.++++ |+.|+|++|.++ .+|.
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 8888 8999999999999999999 888 8999999999999999999 77888999999 999999999998 7788
Q ss_pred cccCCCC--CceeeccCccccccCCcCcc-----CCCCCceeecccccccccCCcc-cccCccccEEEcccCccccccCC
Q 037197 349 RLGQSSP--LRRLDASSNLLSGEIPTGLC-----DSGNLTKLILFNNSFSGTFPVS-LSTCKSLVRVRVQNNLISGTIPV 420 (1009)
Q Consensus 349 ~~~~~~~--L~~L~Ls~N~l~~~~~~~l~-----~l~~L~~L~l~~N~l~~~~p~~-l~~~~~L~~L~L~~N~l~~~~p~ 420 (1009)
.+..... |+.|++++|.+.+.+|...+ .+.+|+.|++++|+++. +|.. +..+++|+.|+|++|+++ .+|.
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~-lp~~~~~~l~~L~~L~Ls~N~L~-~ip~ 714 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQK-FPTELFATGSPISTIILSNNLMT-SIPE 714 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCS-CCHHHHHTTCCCSEEECCSCCCS-CCCT
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCc-cCHHHHccCCCCCEEECCCCcCC-ccCh
Confidence 8877765 99999999999987764332 34589999999999994 5554 458999999999999999 6666
Q ss_pred ccCC--------CCcccEEEeecccccccCCcCCc--CCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCc
Q 037197 421 GLGN--------LPSLQRLEMANNNLTGQIPDDIS--LSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKI 490 (1009)
Q Consensus 421 ~~~~--------l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 490 (1009)
.+.. +++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|++++|+
T Consensus 715 ~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~----- 787 (876)
T 4ecn_A 715 NSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR----- 787 (876)
T ss_dssp TSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB-----
T ss_pred HHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC-----
Confidence 5443 339999999999999 7888887 89999999999999998 67788888888888888886
Q ss_pred ccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCccccccccCcCcCCCC
Q 037197 491 PNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASP 570 (1009)
Q Consensus 491 p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 570 (1009)
++++|++.+.+|..|.++++|+.|+|++|+| +.+|..+. ++|+.|||++|++....+..+....
T Consensus 788 -------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~ 851 (876)
T 4ecn_A 788 -------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYI 851 (876)
T ss_dssp -------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHH
T ss_pred -------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccc
Confidence 6788999999999999999999999999999 69999876 6999999999999988888887777
Q ss_pred CCcEEecCCCccc
Q 037197 571 ALEMLNLSYNKLE 583 (1009)
Q Consensus 571 ~L~~L~ls~N~l~ 583 (1009)
.+..+.|++|++.
T Consensus 852 ~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 852 EAGMYVLLYDKTQ 864 (876)
T ss_dssp HTTCCEEECCTTS
T ss_pred cchheeecCCCcc
Confidence 7888899998765
No 21
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.2e-49 Score=474.79 Aligned_cols=458 Identities=19% Similarity=0.200 Sum_probs=314.4
Q ss_pred CeEecccCcccccCCccccccCccCcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCC
Q 037197 93 SSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGS 172 (1009)
Q Consensus 93 ~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n 172 (1009)
++|++++|.++ .+|..+. ++|++|+|++|.+.+..|..++++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 45777777776 4565555 67777777777777666666777777777777777777666677777777777777777
Q ss_pred ccCCcCCccccCccccceeeeccccccc-cCCccCCCCcchhhhhcccccccccCCccccCCCCc--cEEEeccCcc--c
Q 037197 173 FFEGSVPTSFRNLQKLKFLGLSGNNLTG-KIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNL--RYLDLAVGSL--S 247 (1009)
Q Consensus 173 ~~~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~n~l--~ 247 (1009)
.++ .+|.. .+++|++|+|++|.+++ .+|..|+++++|++|++++|++++ ..++.+++| ++|++++|.+ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 776 44544 66777777777777765 356667777777777777777664 345555555 7777777766 5
Q ss_pred cccCcccCCCC-CCcEEEcccCCcCCCCCc-ccccccccccccccccc-------cCCCcchhhhcccCCCeEecccccc
Q 037197 248 GQIPPALGRLK-KLTTVYLYKNNFTGKIPP-ELGSITSLAFLDLSDNQ-------ISGEIPVKLAELKNLQLLNLMCNQL 318 (1009)
Q Consensus 248 ~~~~~~l~~l~-~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~Ls~N~-------l~~~~~~~l~~l~~L~~L~L~~N~l 318 (1009)
+..|..+..+. +...+++++|.+.+.++. .+..+++|+.|++++|. +.+.+| .+..+++|+.|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 56666665554 233455666666554433 34556666666666665 444333 455556666666665555
Q ss_pred CCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccCCcCc-----cCCCCCceeeccccccccc
Q 037197 319 TGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGL-----CDSGNLTKLILFNNSFSGT 393 (1009)
Q Consensus 319 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l-----~~l~~L~~L~l~~N~l~~~ 393 (1009)
++..+..+ .+ . ...++|+.|++++|.+++.+|..+ ..+++|+.+++++|.+ .
T Consensus 233 ~~~~~~~~-------------------~~-~-~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~ 289 (520)
T 2z7x_B 233 TWNSFIRI-------------------LQ-L-VWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--G 289 (520)
T ss_dssp EHHHHHHH-------------------HH-H-HHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--C
T ss_pred CHHHHHHH-------------------HH-H-hhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--e
Confidence 43211100 00 0 012345555555555555555555 5566666666666666 3
Q ss_pred CC-cccccC---ccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccc--cCC
Q 037197 394 FP-VSLSTC---KSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLES--YLP 467 (1009)
Q Consensus 394 ~p-~~l~~~---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~~ 467 (1009)
+| ..+..+ .+|+.|++++|.+.... .+..+++|++|++++|++++.+|..+..+++|+.|++++|++++ .+|
T Consensus 290 ~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~ 367 (520)
T 2z7x_B 290 FPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIA 367 (520)
T ss_dssp SCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHH
T ss_pred cchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccch
Confidence 33 334333 56777777777775322 12567788888888888887778888888888888888888886 345
Q ss_pred CcccCCcccchhccccCcccCCccc-ccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCccccccc
Q 037197 468 SSILSIPSLQTFMASHNNLQAKIPN-ELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMP 546 (1009)
Q Consensus 468 ~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 546 (1009)
..+..+++|+.|++++|++++.+|. .+..+++|+.|+|++|++++..|..+. ++|+.|+|++|+|+ .+|..+..++
T Consensus 368 ~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~ 444 (520)
T 2z7x_B 368 EMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLE 444 (520)
T ss_dssp HHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCT
T ss_pred HHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCC
Confidence 6778888888888888888875555 478889999999999999888887764 78999999999998 8898888999
Q ss_pred ccceecCCccccccccCcCcCCCCCCcEEecCCCccccCCCC
Q 037197 547 TLAILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEGPVPS 588 (1009)
Q Consensus 547 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~ 588 (1009)
+|+.|||++|+|++..+..|..+++|++|++++|++++..|.
T Consensus 445 ~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 445 ALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCCc
Confidence 999999999999954444489999999999999999987663
No 22
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2e-49 Score=430.99 Aligned_cols=259 Identities=27% Similarity=0.413 Sum_probs=208.3
Q ss_pred hcCCcCceeccCCceEEEEEEEC-----CCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFH-----RPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNV 772 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 772 (1009)
+.|...+.||+|+||+||+|++. .+++.||||+++.. .....+++.+|++++++++|||||+++|+|.+++..
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 90 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 90 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence 35677889999999999999875 35789999999643 344556778999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhcCCc---------cccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcE
Q 037197 773 MMVYDYMPNDSLGEALHGKE---------AGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEA 843 (1009)
Q Consensus 773 ~lV~E~~~~gsL~~~l~~~~---------~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~ 843 (1009)
++|||||++|+|.++++... .....++|.+++.|+.||++||+|||++ +||||||||+|||+++++.+
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcE
Confidence 99999999999999997643 1233589999999999999999999998 99999999999999999999
Q ss_pred EEcccccceecccCCCce--eeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHH
Q 037197 844 RIADFGLARMMLHKNETV--SMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLS 920 (1009)
Q Consensus 844 kl~DfGls~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~ 920 (1009)
||+|||+|+......... ....||+.|||||++.+..++.++|||||||++|||+| |+.||... ...+ +..
T Consensus 168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~-----~~~~-~~~ 241 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL-----SNNE-VIE 241 (299)
T ss_dssp EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-----CHHH-HHH
T ss_pred EECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC-----CHHH-HHH
Confidence 999999998764433222 23568999999999999999999999999999999999 89999742 1222 222
Q ss_pred HHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcC
Q 037197 921 MIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAK 979 (1009)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 979 (1009)
.+..+.. +.....++ .++.+++.+||+.||++|||++|+++.|+++.
T Consensus 242 ~i~~~~~------~~~p~~~~------~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 242 CITQGRV------LQRPRTCP------QEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp HHHHTCC------CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHcCCC------CCCCccch------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 2333321 11122222 24667899999999999999999999998874
No 23
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=9.9e-49 Score=431.56 Aligned_cols=258 Identities=28% Similarity=0.405 Sum_probs=203.4
Q ss_pred cCCcCceeccCCceEEEEEEECC-----CCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEE
Q 037197 699 CVKESNIIGMGGNGIVYKAEFHR-----PHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 699 ~~~~~~~iG~G~~g~Vyk~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 773 (1009)
.|...+.||+|+||+||+|+++. +++.||||+++.. .....+++.+|++++++++|||||+++|+|.+++..+
T Consensus 42 d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 35566789999999999998753 5789999999643 3445567889999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhcCCccc-----------cccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCc
Q 037197 774 MVYDYMPNDSLGEALHGKEAG-----------KLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLE 842 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~ 842 (1009)
+|||||++|+|.++++..... ...++|.+++.|+.|||+||+|||+. +||||||||+|||+++++.
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCc
Confidence 999999999999999765321 23589999999999999999999998 9999999999999999999
Q ss_pred EEEcccccceecccCCC--ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHH
Q 037197 843 ARIADFGLARMMLHKNE--TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVL 919 (1009)
Q Consensus 843 ~kl~DfGls~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~ 919 (1009)
+||+|||+|+.....+. ......||+.|||||++.+..++.++|||||||++|||+| |+.||... ...+.+
T Consensus 197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~-----~~~~~~- 270 (329)
T 4aoj_A 197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL-----SNTEAI- 270 (329)
T ss_dssp EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSS-----CHHHHH-
T ss_pred EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCC-----CHHHHH-
Confidence 99999999987644332 2344679999999999999999999999999999999999 89999742 122222
Q ss_pred HHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcC
Q 037197 920 SMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAK 979 (1009)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 979 (1009)
..+..+.. +.....++ .++.+++.+||+.||++|||++||++.|+.+.
T Consensus 271 ~~i~~g~~------~~~p~~~~------~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~ 318 (329)
T 4aoj_A 271 DCITQGRE------LERPRACP------PEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318 (329)
T ss_dssp HHHHHTCC------CCCCTTCC------HHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHHHcCCC------CCCccccc------HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence 22333221 11222222 24567889999999999999999999999875
No 24
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=6.2e-49 Score=431.76 Aligned_cols=250 Identities=24% Similarity=0.365 Sum_probs=207.7
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEEe
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVYD 777 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~E 777 (1009)
+.|+..+.||+|+||+||+|+++.+|+.||||++..... ...+.+.+|++++++++|||||+++++|.+++.+|+|||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmE 151 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 151 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 457888899999999999999999999999999965432 234567799999999999999999999999999999999
Q ss_pred ccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecccC
Q 037197 778 YMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLHK 857 (1009)
Q Consensus 778 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~ 857 (1009)
||++|+|.++++... +++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+...
T Consensus 152 y~~gg~L~~~l~~~~-----l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 223 (346)
T 4fih_A 152 FLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223 (346)
T ss_dssp CCTTEEHHHHHHHSC-----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred CCCCCcHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCC
Confidence 999999999996532 78999999999999999999999 9999999999999999999999999999987665
Q ss_pred CCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCcccc
Q 037197 858 NETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSIA 937 (1009)
Q Consensus 858 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (1009)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||... +..+.+. .+.... .+.+.
T Consensus 224 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-----~~~~~~~-~i~~~~------~~~~~ 291 (346)
T 4fih_A 224 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE-----PPLKAMK-MIRDNL------PPRLK 291 (346)
T ss_dssp SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHHH-HHHHSS------CCCCS
T ss_pred CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----CHHHHHH-HHHcCC------CCCCC
Confidence 55566788999999999999999999999999999999999999999732 2222222 222221 11111
Q ss_pred ccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 938 GQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 938 ~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
...... .++.+++.+||+.||++|||+.|+++
T Consensus 292 -~~~~~s---~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 292 -NLHKVS---PSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp -CGGGSC---HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -ccccCC---HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 001111 24567889999999999999998864
No 25
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=4.8e-49 Score=429.87 Aligned_cols=258 Identities=26% Similarity=0.410 Sum_probs=208.0
Q ss_pred cCCcCceeccCCceEEEEEEEC-----CCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEE
Q 037197 699 CVKESNIIGMGGNGIVYKAEFH-----RPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 699 ~~~~~~~iG~G~~g~Vyk~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 773 (1009)
.++..+.||+|+||+||+|.+. .+++.||||+++... .....+++.+|+.++++++|||||+++|+|.+++..+
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 3456778999999999999874 357899999996543 3344567889999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhcCCcc------------ccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCC
Q 037197 774 MVYDYMPNDSLGEALHGKEA------------GKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANL 841 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~ 841 (1009)
+|||||++|+|.++++.+.. .+..++|.++++|+.|||+||+|||++ +||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCC
Confidence 99999999999999965431 123589999999999999999999999 999999999999999999
Q ss_pred cEEEcccccceecccCC--CceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHH
Q 037197 842 EARIADFGLARMMLHKN--ETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWV 918 (1009)
Q Consensus 842 ~~kl~DfGls~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~ 918 (1009)
.+||+|||+++.....+ .......||+.|||||++.+..++.++|||||||++|||+| |+.||.... ..+ +
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~-----~~~-~ 256 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS-----NQD-V 256 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC-----HHH-H
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC-----HHH-H
Confidence 99999999998764433 22344679999999999999999999999999999999999 899997421 122 2
Q ss_pred HHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhc
Q 037197 919 LSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEA 978 (1009)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 978 (1009)
...+..+.. +.....++ ..+.+++.+||+.||++||||+||++.|+..
T Consensus 257 ~~~i~~~~~------~~~p~~~~------~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 257 VEMIRNRQV------LPCPDDCP------AWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHHHTTCC------CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHcCCC------CCCcccch------HHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 233333221 11122222 2466789999999999999999999999864
No 26
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.8e-49 Score=429.43 Aligned_cols=249 Identities=21% Similarity=0.268 Sum_probs=206.4
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC-ChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN-DIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
+.|+..+.||+|+||+||+|+++.+++.||||++.+... .....+.+.+|++++++++|||||++++++++++.+|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 458899999999999999999999999999999965321 1233466779999999999999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
|||+||+|.++++.... +++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 112 Ey~~gG~L~~~i~~~~~----l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 99999999999975432 88899999999999999999999 999999999999999999999999999998754
Q ss_pred CC--CceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCc
Q 037197 857 KN--ETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDP 934 (1009)
Q Consensus 857 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1009)
.. ......+||+.|||||++.+..++.++||||+||++|||++|+.||... +..+..........
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-----~~~~~~~~i~~~~~-------- 251 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-----NEGLIFAKIIKLEY-------- 251 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCC--------
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCC--------
Confidence 33 2345678999999999999999999999999999999999999999732 22333333222211
Q ss_pred cccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Q 037197 935 SIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVI 972 (1009)
Q Consensus 935 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl 972 (1009)
.+..... .++.+++.+|++.||++|||++|+.
T Consensus 252 ~~p~~~s------~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 252 DFPEKFF------PKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp CCCTTCC------HHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred CCCcccC------HHHHHHHHHHccCCHhHCcChHHHc
Confidence 1111111 2356788999999999999998863
No 27
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=6.9e-49 Score=430.23 Aligned_cols=265 Identities=23% Similarity=0.277 Sum_probs=211.4
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEEe
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVYD 777 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~E 777 (1009)
+.|+..+.||+|+||+||+|+++.+|+.||||+++.... ..+|++++++++|||||++++++.+++.+|+|||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 457788899999999999999999999999999965321 1379999999999999999999999999999999
Q ss_pred ccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCC-cEEEcccccceeccc
Q 037197 778 YMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANL-EARIADFGLARMMLH 856 (1009)
Q Consensus 778 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~-~~kl~DfGls~~~~~ 856 (1009)
||+||+|.++++... .+++.++..++.||+.||+|||++ +||||||||+|||++.++ ++||+|||+|+.+..
T Consensus 131 y~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~ 203 (336)
T 4g3f_A 131 LLEGGSLGQLIKQMG----CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203 (336)
T ss_dssp CCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred ccCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence 999999999997543 289999999999999999999998 999999999999999988 699999999987654
Q ss_pred CCC-----ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccc
Q 037197 857 KNE-----TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEA 931 (1009)
Q Consensus 857 ~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1009)
... .....+||+.|||||++.+..++.++||||+||++|||+||+.||...... .+...+. .......
T Consensus 204 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~--~~~~~i~----~~~~~~~- 276 (336)
T 4g3f_A 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG--PLCLKIA----SEPPPIR- 276 (336)
T ss_dssp ----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS--CCHHHHH----HSCCGGG-
T ss_pred CCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--HHHHHHH----cCCCCch-
Confidence 321 123357999999999999999999999999999999999999999753322 2222221 1111111
Q ss_pred cCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCcccccccCCCCCCCCcccccC
Q 037197 932 LDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRRKSICQNGGHNLSKERPIFGN 1002 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1009)
.+...++ ..+.+++.+||+.||++|||+.|+++.|..+.... ...+|||+..
T Consensus 277 ---~~~~~~s------~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~----------~~l~hPw~~~ 328 (336)
T 4g3f_A 277 ---EIPPSCA------PLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV----------GGLKSPWKGE 328 (336)
T ss_dssp ---GSCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT----------TSSCSCSSSS
T ss_pred ---hcCccCC------HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh----------hhccCCCcCC
Confidence 1111111 23567888999999999999999999988765322 1267888754
No 28
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.5e-49 Score=469.09 Aligned_cols=455 Identities=19% Similarity=0.207 Sum_probs=346.7
Q ss_pred eEEeccccccccccccccccCCCCCeEecccCcccccCCccccccCccCcccccccccCCCCCCCCCCCcCCeEEecCCC
Q 037197 69 EKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSN 148 (1009)
Q Consensus 69 ~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n 148 (1009)
+.||+++++++ .+|..+. ++|++|+|++|.+++..|..+.++++|++|+|++|++++..|..++++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 47899999999 4777665 89999999999999888899999999999999999999888999999999999999999
Q ss_pred CCCCCCCccccCCCCCCeeeccCCccCC-cCCccccCccccceeeeccccccccCCccCCCCcch--hhhhcccccc--c
Q 037197 149 NFSGFLPEDLGNATSLESLDFRGSFFEG-SVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSL--ETIILGYNAF--E 223 (1009)
Q Consensus 149 ~l~~~~p~~l~~l~~L~~L~L~~n~~~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L--~~L~L~~n~l--~ 223 (1009)
+++ .+|.. .+++|++|+|++|.+++ .+|..|+++++|++|+|++|.+++ ..++.+++| ++|++++|.+ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 999 57766 89999999999999997 578999999999999999999986 457777888 9999999999 8
Q ss_pred ccCCccccCCC-CccEEEeccCccccccCc-ccCCCCCCcEEEcccCC-------cCCCCCccccccccccccccccccc
Q 037197 224 GEIPAEFGNLT-NLRYLDLAVGSLSGQIPP-ALGRLKKLTTVYLYKNN-------FTGKIPPELGSITSLAFLDLSDNQI 294 (1009)
Q Consensus 224 ~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~-~l~~l~~L~~L~L~~n~-------l~~~~~~~~~~l~~L~~L~Ls~N~l 294 (1009)
+..|..+..+. +...+++++|.+.+.++. .+..+++|+.|++++|. +.+.+| .+..+++|+.|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 88899888876 355678889998876654 67889999999999998 776665 788999999999999999
Q ss_pred CCCcchhhh---cccCCCeEeccccccCCCCCcCC-----CCCCcccEEEccCCccCccCC-ccccCC---CCCceeecc
Q 037197 295 SGEIPVKLA---ELKNLQLLNLMCNQLTGLIPDKL-----GELTKLEVLELWKNSLIGSLP-MRLGQS---SPLRRLDAS 362 (1009)
Q Consensus 295 ~~~~~~~l~---~l~~L~~L~L~~N~l~~~~~~~l-----~~l~~L~~L~L~~N~l~~~~~-~~~~~~---~~L~~L~Ls 362 (1009)
++..+..+. ..++|++|++++|++++.+|..+ .++++|+.+++++|.+ .+| ..+..+ .+|+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~ 310 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVS 310 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEE
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcC
Confidence 864443322 24689999999999998889888 8899999999998887 344 333333 457777777
Q ss_pred CccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccC
Q 037197 363 SNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQI 442 (1009)
Q Consensus 363 ~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 442 (1009)
+|.+.+.. .+..+++|++|++++|++++..|..+..+++|++|++++|++++.. .+
T Consensus 311 ~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~----------------------~~ 366 (520)
T 2z7x_B 311 GTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELS----------------------KI 366 (520)
T ss_dssp SSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHH----------------------HH
T ss_pred CCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccc----------------------cc
Confidence 77665321 1134455555555555555544555555555555555555554300 23
Q ss_pred CcCCcCCCCCcEEecccCcccc-cCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCcccccc
Q 037197 443 PDDISLSTSLSFVDISWNHLES-YLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASC 521 (1009)
Q Consensus 443 p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l 521 (1009)
|..+..+++|+.|++++|++++ +.+..+..+++|++|++++|++++..|..+. ++|+.|||++|+++ .+|..+..+
T Consensus 367 ~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l 443 (520)
T 2z7x_B 367 AEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKL 443 (520)
T ss_dssp HHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGC
T ss_pred hHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcC
Confidence 3344444555555555555554 2222345555666666666666555555443 67888888888888 777777788
Q ss_pred ccceeeeecCcccccCCCcc-cccccccceecCCccccccccC
Q 037197 522 EKLVSLNLRNNRFSGEIPKA-VATMPTLAILDMSNNSLFGRIP 563 (1009)
Q Consensus 522 ~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p 563 (1009)
++|++|+|++|+|+ .+|.. +..+++|+.|+|++|++++..+
T Consensus 444 ~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 444 EALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp TTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCC
Confidence 88999999999988 46654 8888999999999999887654
No 29
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.1e-47 Score=467.48 Aligned_cols=510 Identities=20% Similarity=0.201 Sum_probs=330.9
Q ss_pred eeEEeccccccccccccccccCCCCCeEecccCcccccCCccccccCccCcccccccccCCCCCCCCCCCcCCeEEecCC
Q 037197 68 VEKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNASS 147 (1009)
Q Consensus 68 v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~ 147 (1009)
+++|||++|.|++..+..|.++++|++|+|++|++++..|.+|.+|++|++|+|++|++++..+..|+++++|++|+|++
T Consensus 54 ~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~ 133 (635)
T 4g8a_A 54 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVE 133 (635)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTT
T ss_pred CCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCC
Confidence 45555555555554444555555555555555555555555555555555555555555544444455555555555555
Q ss_pred CCCCCCCCccccCCCCCCeeeccCCccCC-cCCccccCccccceeeeccccccccCCccCCCCcchh----hhhcccccc
Q 037197 148 NNFSGFLPEDLGNATSLESLDFRGSFFEG-SVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSLE----TIILGYNAF 222 (1009)
Q Consensus 148 n~l~~~~p~~l~~l~~L~~L~L~~n~~~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~----~L~L~~n~l 222 (1009)
|++++..+..|+++++|++|+|++|.+.+ ..|..++.+++|++|+|++|++++..|..|..+.+++ .++++.|.+
T Consensus 134 N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l 213 (635)
T 4g8a_A 134 TNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPM 213 (635)
T ss_dssp SCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCC
T ss_pred CcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcc
Confidence 55554444455555555555555555543 2345555555555555555555555555554444333 244555555
Q ss_pred cccCCccccCCCCccEEEeccCccccc-cCcccCCCCCCcEEEcccCC------cCCCCCcccccccccccccccccccC
Q 037197 223 EGEIPAEFGNLTNLRYLDLAVGSLSGQ-IPPALGRLKKLTTVYLYKNN------FTGKIPPELGSITSLAFLDLSDNQIS 295 (1009)
Q Consensus 223 ~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~L~~n~------l~~~~~~~~~~l~~L~~L~Ls~N~l~ 295 (1009)
+...+..+.. ..++.|++.+|..... .+..+..+..++...+..+. +.......+..+..+..+++..+...
T Consensus 214 ~~i~~~~~~~-~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~ 292 (635)
T 4g8a_A 214 NFIQPGAFKE-IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLD 292 (635)
T ss_dssp CEECTTTTTT-CEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCC
T ss_pred cccCcccccc-hhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhc
Confidence 5333333322 2445555555543322 22334445555544443222 22222333444445555555444332
Q ss_pred C---CcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccCCc
Q 037197 296 G---EIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPT 372 (1009)
Q Consensus 296 ~---~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~ 372 (1009)
. ..+..+..+.+++.+.+.+|.+.... .+.....|+.|++.+|.+....+. .+..|+.+++++|.+... .
T Consensus 293 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~--~ 365 (635)
T 4g8a_A 293 YYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNA--F 365 (635)
T ss_dssp SCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCB--C
T ss_pred ccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCC--c
Confidence 1 22334566677888888888776542 345567788888888887654443 456677888888876633 2
Q ss_pred CccCCCCCceeecccccccc--cCCcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCC-cCCcCC
Q 037197 373 GLCDSGNLTKLILFNNSFSG--TFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIP-DDISLS 449 (1009)
Q Consensus 373 ~l~~l~~L~~L~l~~N~l~~--~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l 449 (1009)
....+++|+.|++++|.+.. ..+..+..+.+|+.+++..|.+. ..+..+..+++|+.++++.|++....+ ..+..+
T Consensus 366 ~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l 444 (635)
T 4g8a_A 366 SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSL 444 (635)
T ss_dssp CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTC
T ss_pred ccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhccccccccccccccc
Confidence 34467888888888888753 45556667788888888888887 455667788888888888887765544 456778
Q ss_pred CCCcEEecccCcccccCCCcccCCcccchhccccCccc-CCcccccccCCcCcEEEeecCCCCCCCCccccccccceeee
Q 037197 450 TSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQ-AKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLN 528 (1009)
Q Consensus 450 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~ 528 (1009)
.+++.++++.|++++..+..+..++.++.|++++|++. +..|..|..+++|++|||++|+|++.+|..|.++++|++|+
T Consensus 445 ~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~ 524 (635)
T 4g8a_A 445 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 524 (635)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEE
Confidence 88888888888888888888888888888888888754 45677888888888888888888888888888888888888
Q ss_pred ecCcccccCCCcccccccccceecCCccccccccCcCcCCC-CCCcEEecCCCccccCC
Q 037197 529 LRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGAS-PALEMLNLSYNKLEGPV 586 (1009)
Q Consensus 529 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~ls~N~l~g~i 586 (1009)
|++|+|++..|..|..+++|+.|||++|+|++.+|..|..+ ++|++|+|++|++++..
T Consensus 525 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 525 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp CTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred CCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 88888888888888888888888888888888888888887 57888888888887643
No 30
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4.8e-48 Score=416.71 Aligned_cols=249 Identities=26% Similarity=0.372 Sum_probs=200.0
Q ss_pred CcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEc----CCeEEEEE
Q 037197 701 KESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHN----ETNVMMVY 776 (1009)
Q Consensus 701 ~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~----~~~~~lV~ 776 (1009)
+..+.||+|+||+||+|.+..+++.||+|++..........+.+.+|++++++++|||||+++++|.+ +..+|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 55667999999999999999999999999997665555566778899999999999999999999865 35689999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCC-CCcEEEcccccceecc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDA-NLEARIADFGLARMML 855 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~-~~~~kl~DfGls~~~~ 855 (1009)
|||++|+|.++++... .+++..+..++.||+.||+|||++ .++||||||||+|||++. ++.+||+|||+|+..
T Consensus 109 Ey~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~- 182 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK- 182 (290)
T ss_dssp ECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC-
T ss_pred eCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeC-
Confidence 9999999999997543 278999999999999999999998 123999999999999974 799999999999753
Q ss_pred cCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCcc
Q 037197 856 HKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPS 935 (1009)
Q Consensus 856 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1009)
........+||+.|||||++.+ +++.++|||||||++|||+||+.||.... . ...+...+..+.. .+.
T Consensus 183 -~~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~----~-~~~~~~~i~~~~~-----~~~ 250 (290)
T 3fpq_A 183 -RASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ----N-AAQIYRRVTSGVK-----PAS 250 (290)
T ss_dssp -CTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS----S-HHHHHHHHTTTCC-----CGG
T ss_pred -CCCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC----c-HHHHHHHHHcCCC-----CCC
Confidence 2334456789999999998764 69999999999999999999999996321 1 2222233322211 111
Q ss_pred ccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 936 IAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 936 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
+..... .++.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~------~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 251 FDKVAI------PEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GGGCCC------HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCccCC------HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111111 23567889999999999999999864
No 31
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.9e-48 Score=413.53 Aligned_cols=249 Identities=23% Similarity=0.349 Sum_probs=190.6
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC-ChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN-DIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
.++|+..+.||+|+||+||+|++..+++.||||++.+... .......+.+|++++++++|||||++++++.+++..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 4679999999999999999999999999999999976533 233355677999999999999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
|||+ +|+|.+++..+.. +++.++..++.||+.||+|||++ +|+||||||+||++++++.+||+|||+|+...
T Consensus 92 mEy~-~g~L~~~l~~~~~----l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 163 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRDK----MSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp EECC-CEEHHHHHHHSCS----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred EeCC-CCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence 9999 6899999875432 88999999999999999999999 99999999999999999999999999998764
Q ss_pred cCCCceeeecccCcccCCcccCCCCC-CcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCc
Q 037197 856 HKNETVSMVAGSYGYIAPEYGYTLKV-DEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDP 934 (1009)
Q Consensus 856 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1009)
.. ......+||+.|+|||++.+..+ +.++||||+||++|||+||+.||.. .+..+.... +..+..
T Consensus 164 ~~-~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~-----~~~~~~~~~-i~~~~~------- 229 (275)
T 3hyh_A 164 DG-NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-----ESIPVLFKN-ISNGVY------- 229 (275)
T ss_dssp ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHH-HHHTCC-------
T ss_pred CC-CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC-----CCHHHHHHH-HHcCCC-------
Confidence 32 33445789999999999988776 5799999999999999999999973 222333222 222211
Q ss_pred cccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 935 SIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 935 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.+....+ .++.+++.+|++.||++|||++|+++
T Consensus 230 ~~p~~~s------~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 230 TLPKFLS------PGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CCCTTSC------HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCCCCC------HHHHHHHHHHccCChhHCcCHHHHHc
Confidence 1111111 23567889999999999999999864
No 32
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=8.3e-48 Score=433.25 Aligned_cols=251 Identities=24% Similarity=0.362 Sum_probs=209.1
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
.+.|+..+.||+|+||.||+|+++.+|+.||||++..... ...+.+.+|+++|++++|||||+++++|.+++.+|+||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC--SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 4568899999999999999999999999999999965432 33456779999999999999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
|||+||+|.++++... +++.++..|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+..
T Consensus 228 Ey~~gG~L~~~i~~~~-----l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 228 EFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp ECCTTEEHHHHHHHSC-----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred eCCCCCcHHHHHhccC-----CCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 9999999999996432 78899999999999999999999 999999999999999999999999999998766
Q ss_pred CCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCccc
Q 037197 857 KNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSI 936 (1009)
Q Consensus 857 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1009)
........+||+.|||||++.+..|+.++|||||||++|||++|+.||... +..+.+. .+..... +.+
T Consensus 300 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-----~~~~~~~-~i~~~~~------~~~ 367 (423)
T 4fie_A 300 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE-----PPLKAMK-MIRDNLP------PRL 367 (423)
T ss_dssp SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHHH-HHHHSCC------CCC
T ss_pred CCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----CHHHHHH-HHHcCCC------CCC
Confidence 555566788999999999999999999999999999999999999999632 2222222 2222211 111
Q ss_pred cccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 937 AGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 937 ~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
. ...... .++.+++.+||+.||++|||+.|+++
T Consensus 368 ~-~~~~~s---~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 368 K-NLHKVS---PSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp S-CTTSSC---HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred c-ccccCC---HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1 001111 24567889999999999999999853
No 33
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.3e-47 Score=416.85 Aligned_cols=265 Identities=26% Similarity=0.318 Sum_probs=201.7
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHH--HHHHHHhccCCCceeeEEeEEEcCC----e
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLF--REVSLLGRLRHRNIVRLLGYLHNET----N 771 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~--~E~~~l~~l~Hpniv~l~~~~~~~~----~ 771 (1009)
+.|...+.||+|+||+||+|++. |+.||||++... ....+. .|+..+.+++|||||+++++|.+++ .
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~--g~~VAvK~l~~~-----~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~ 75 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET--TEEEEEEEECGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC--CEEEEEEEECcc-----chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceE
Confidence 34667789999999999999984 789999998432 223333 4566667889999999999997654 5
Q ss_pred EEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhc-----CCCCeEEeccCCCcEEeCCCCcEEEc
Q 037197 772 VMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHD-----CQPPVIHRDIKSNNILLDANLEARIA 846 (1009)
Q Consensus 772 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~-----~~~~ivH~dlk~~NIll~~~~~~kl~ 846 (1009)
+++|||||++|+|.++++... ++|..+.+++.|+++||+|||++ +.++||||||||+|||++.++.+||+
T Consensus 76 ~~lV~Ey~~~gsL~~~l~~~~-----l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~ 150 (303)
T 3hmm_A 76 LWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 150 (303)
T ss_dssp EEEEEECCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred EEEEecCCCCCcHHHHHHhCC-----CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEE
Confidence 799999999999999997543 79999999999999999999976 25689999999999999999999999
Q ss_pred ccccceecccCCCc----eeeecccCcccCCcccCCC------CCCcccchHhHHHHHHHHHhCCCCCCCCCC-------
Q 037197 847 DFGLARMMLHKNET----VSMVAGSYGYIAPEYGYTL------KVDEKSDIYSFGVVLLELLTGKMPLDPAFG------- 909 (1009)
Q Consensus 847 DfGls~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~sDv~SlGvvl~elltg~~Pf~~~~~------- 909 (1009)
|||+|+........ .....||+.|||||++.+. .++.++|||||||++|||+||+.||.....
T Consensus 151 DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~ 230 (303)
T 3hmm_A 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230 (303)
T ss_dssp CCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTT
T ss_pred eCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchh
Confidence 99999876544322 2345799999999987653 467899999999999999999887653211
Q ss_pred ---CCccHHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCC
Q 037197 910 ---GSKDIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPR 981 (1009)
Q Consensus 910 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~ 981 (1009)
.... ...+...+. ....+|.+..... ..+....+.+++.+||+.||++||||.||++.|+++.++
T Consensus 231 ~~~~~~~-~~~~~~~~~-----~~~~rp~~p~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 231 LVPSDPS-VEEMRKVVC-----EQKLRPNIPNRWQ-SCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp TSCSSCC-HHHHHHHHT-----TSCCCCCCCGGGG-SSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cccccch-HHHHHHHHh-----cccCCCCCCcccc-chHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 1111 222222222 2223444433222 123445677899999999999999999999999988644
No 34
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=4.2e-48 Score=419.06 Aligned_cols=245 Identities=22% Similarity=0.306 Sum_probs=195.5
Q ss_pred hcCCcCceeccCCceEEEEEEEC---CCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFH---RPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMM 774 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 774 (1009)
++|+..+.||+|+||+||+|++. .+++.||||++.+..........+.+|++++++++|||||++++++.+++.+|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 46889999999999999999874 467899999997654333344567789999999999999999999999999999
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceec
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMM 854 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~ 854 (1009)
|||||+||+|.++++... .+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV----MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 999999999999997543 288999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCc
Q 037197 855 LHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDP 934 (1009)
Q Consensus 855 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1009)
..........+||+.|||||++.+..++.++||||+||++|||+||+.||... +..+.+........
T Consensus 177 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~-----~~~~~~~~i~~~~~-------- 243 (304)
T 3ubd_A 177 IDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK-----DRKETMTMILKAKL-------- 243 (304)
T ss_dssp ----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCC--------
T ss_pred cCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc-----CHHHHHHHHHcCCC--------
Confidence 55555556678999999999999999999999999999999999999999732 22333333222211
Q ss_pred cccccCchHHHHHHHHHHHHHHhccCCCCCCCCH
Q 037197 935 SIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTM 968 (1009)
Q Consensus 935 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~ 968 (1009)
.+....+ .++.+++.+||+.||++|||+
T Consensus 244 ~~p~~~s------~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 244 GMPQFLS------PEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp CCCTTSC------HHHHHHHHHHTCSSGGGSTTC
T ss_pred CCCCcCC------HHHHHHHHHHcccCHHHCCCC
Confidence 1111111 235678899999999999985
No 35
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.4e-46 Score=455.79 Aligned_cols=527 Identities=18% Similarity=0.177 Sum_probs=431.7
Q ss_pred eccccccccccccccccCCCCCeEecccCcccccCCccccccCccCcccccccccCCCCCCCCCCCcCCeEEecCCCCCC
Q 037197 72 DLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFS 151 (1009)
Q Consensus 72 ~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~ 151 (1009)
+-++.+++ .+|..+. +++++|||++|.|++..+.+|.++++|++|||++|++++..|.+|+++++|++|+|++|+++
T Consensus 37 ~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~ 113 (635)
T 4g8a_A 37 QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 113 (635)
T ss_dssp ECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred ECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC
Confidence 44555565 3555442 47999999999999888889999999999999999999877888999999999999999999
Q ss_pred CCCCccccCCCCCCeeeccCCccCCcCCccccCccccceeeeccccccc-cCCccCCCCcchhhhhcccccccccCCccc
Q 037197 152 GFLPEDLGNATSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLSGNNLTG-KIPPELGQLSSLETIILGYNAFEGEIPAEF 230 (1009)
Q Consensus 152 ~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~ 230 (1009)
+..+..|+++++|++|+|++|.+++..+..|+++++|++|+|++|.+++ .+|..++.+++|++|+|++|++++..+..|
T Consensus 114 ~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 193 (635)
T 4g8a_A 114 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 193 (635)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccc
Confidence 7777889999999999999999998878889999999999999999976 467888999999999999999999888888
Q ss_pred cCCCCc----cEEEeccCccccccCcccCCCCCCcEEEcccCCcCCC-CCcccccccccccccccccc------cCCCcc
Q 037197 231 GNLTNL----RYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGK-IPPELGSITSLAFLDLSDNQ------ISGEIP 299 (1009)
Q Consensus 231 ~~l~~L----~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~Ls~N~------l~~~~~ 299 (1009)
..+.++ ..++++.|.++...+..+. ...++.+++.+|..... .+..+..+..++...+..+. +.....
T Consensus 194 ~~L~~l~~~~~~~~ls~n~l~~i~~~~~~-~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~ 272 (635)
T 4g8a_A 194 RVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDK 272 (635)
T ss_dssp HHHHTCTTCCCEEECTTCCCCEECTTTTT-TCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCT
T ss_pred cchhhhhhhhhhhhcccCcccccCccccc-chhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccc
Confidence 776654 4789999999866555544 45678899988876532 23345566666666654433 333344
Q ss_pred hhhhcccCCCeEeccccccCCC---CCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccCCcCccC
Q 037197 300 VKLAELKNLQLLNLMCNQLTGL---IPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLCD 376 (1009)
Q Consensus 300 ~~l~~l~~L~~L~L~~N~l~~~---~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 376 (1009)
..+..+..+..+.+..+..... .+..+..+.+++.+++.+|.+.... .+.....++.|++++|.+.+..+. .
T Consensus 273 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~---~ 347 (635)
T 4g8a_A 273 SALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPTL---K 347 (635)
T ss_dssp TTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCCC---B
T ss_pred cccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCcc---c
Confidence 5566677777777776654322 3445666788999999998876543 355667899999999998855443 4
Q ss_pred CCCCceeecccccccccCCcccccCccccEEEcccCcccc--ccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcE
Q 037197 377 SGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISG--TIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSF 454 (1009)
Q Consensus 377 l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 454 (1009)
+..|+.+++..|.+... .....+++|+.|++++|.+.. ..+..+..+.+|+.|++..|.+. .++..+..+.+|+.
T Consensus 348 l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~ 424 (635)
T 4g8a_A 348 LKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEH 424 (635)
T ss_dssp CTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCE
T ss_pred chhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccccc
Confidence 56889999999987643 345678999999999999963 45566778899999999999987 45667888999999
Q ss_pred EecccCcccccCC-CcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCC-CCCCCccccccccceeeeecCc
Q 037197 455 VDISWNHLESYLP-SSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSL-SGEIPASIASCEKLVSLNLRNN 532 (1009)
Q Consensus 455 L~Ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l-~~~~p~~~~~l~~L~~L~Ls~N 532 (1009)
++++.|+.....+ ..|..+++++.++++.|.+.+..+..+..++.|+.|+|++|++ .+.+|..|..+++|++|+|++|
T Consensus 425 l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N 504 (635)
T 4g8a_A 425 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 504 (635)
T ss_dssp EECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred hhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCC
Confidence 9999988776544 5678999999999999999999999999999999999999985 4567889999999999999999
Q ss_pred ccccCCCcccccccccceecCCccccccccCcCcCCCCCCcEEecCCCccccCCCCCCc-c-cccCCcccccCcCCCCCC
Q 037197 533 RFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEGPVPSNGI-L-MNINPNELIGNAGLCGSV 610 (1009)
Q Consensus 533 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~-~-~~~~~~~~~~n~~lcg~~ 610 (1009)
+|++.+|..|.++++|+.|+|++|+|++.+|..|..+++|++|||++|+|++.+|..-+ + .++....+.+||.-|.+.
T Consensus 505 ~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 505 QLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred ccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 99999999999999999999999999999999999999999999999999999987421 2 334555678999999753
No 36
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.8e-47 Score=423.24 Aligned_cols=263 Identities=25% Similarity=0.330 Sum_probs=211.4
Q ss_pred HhcCCcCceeccCCceEEEEEEECCC-----CeEEEEEEcccCCCChhhHHHHHHHHHHHhccCC-CceeeEEeEEEc-C
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRP-----HMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRH-RNIVRLLGYLHN-E 769 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H-pniv~l~~~~~~-~ 769 (1009)
.++|+..+.||+|+||+||+|.+... ++.||||++.... .....+.+.+|++++++++| ||||+++|+|.+ +
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~ 141 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 141 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence 35788999999999999999997653 4789999996543 33445677899999999965 999999999966 4
Q ss_pred CeEEEEEeccCCCChhhhhcCCcc------------ccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEe
Q 037197 770 TNVMMVYDYMPNDSLGEALHGKEA------------GKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILL 837 (1009)
Q Consensus 770 ~~~~lV~E~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll 837 (1009)
+.+++|||||++|+|.++++.... .+..+++.++..++.|||+||+|||++ +||||||||+|||+
T Consensus 142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NILl 218 (353)
T 4ase_A 142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILL 218 (353)
T ss_dssp SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccceee
Confidence 568999999999999999975432 123489999999999999999999999 99999999999999
Q ss_pred CCCCcEEEcccccceecccCCC--ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccH
Q 037197 838 DANLEARIADFGLARMMLHKNE--TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDI 914 (1009)
Q Consensus 838 ~~~~~~kl~DfGls~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~ 914 (1009)
++++.+||+|||+|+....... ......||+.|||||++.+..++.++|||||||++|||+| |+.||......
T Consensus 219 ~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~---- 294 (353)
T 4ase_A 219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID---- 294 (353)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS----
T ss_pred CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH----
Confidence 9999999999999987654432 2234678999999999999999999999999999999998 99999743221
Q ss_pred HHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCC
Q 037197 915 VEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKP 980 (1009)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 980 (1009)
+.+...+..+. .+.....++ .++.+++.+||+.||++|||++|+++.|+++.+
T Consensus 295 -~~~~~~i~~g~------~~~~p~~~~------~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 295 -EEFCRRLKEGT------RMRAPDYTT------PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp -HHHHHHHHHTC------CCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -HHHHHHHHcCC------CCCCCccCC------HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 22333333332 112222222 245678899999999999999999999988753
No 37
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3.5e-46 Score=448.69 Aligned_cols=458 Identities=19% Similarity=0.199 Sum_probs=283.4
Q ss_pred CeEecccCcccccCCccccccCccCcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCC
Q 037197 93 SSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGS 172 (1009)
Q Consensus 93 ~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n 172 (1009)
+++++++|.+++ +|..+. ++|++|+|++|.+++..|..++++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 566666666653 454443 56666666666666555556666666666666666666555555666666666666666
Q ss_pred ccCCcCCccccCccccceeeeccccccc-cCCccCCCCcchhhhhcccccccccCCccccCCCCc--cEEEeccCcc--c
Q 037197 173 FFEGSVPTSFRNLQKLKFLGLSGNNLTG-KIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNL--RYLDLAVGSL--S 247 (1009)
Q Consensus 173 ~~~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~n~l--~ 247 (1009)
.++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++. .+..+++| ++|++++|.+ +
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~ 184 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIK 184 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccccc
Confidence 655 34433 55566666666666554 2335555555555555555555532 22333333 5555555555 4
Q ss_pred cccCcccCCCC-CCcEEEcccCCcCCCCCc-ccccccccccccccccc-----cCCCcchhhhcccCCCeEeccccccCC
Q 037197 248 GQIPPALGRLK-KLTTVYLYKNNFTGKIPP-ELGSITSLAFLDLSDNQ-----ISGEIPVKLAELKNLQLLNLMCNQLTG 320 (1009)
Q Consensus 248 ~~~~~~l~~l~-~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~Ls~N~-----l~~~~~~~l~~l~~L~~L~L~~N~l~~ 320 (1009)
+..|..+..+. ..-.+++++|.+.+.++. .+..+++|+.|++++|+ +.+ ....+..+++|+.|+++++.+++
T Consensus 185 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~~ 263 (562)
T 3a79_B 185 GGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETTW 263 (562)
T ss_dssp SSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEECH
T ss_pred ccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCcCcH
Confidence 45555544433 111334455555443332 22334455555555543 111 11223344444444444443332
Q ss_pred CCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccCCcCc-----cCCCCCceeecccccccccCC
Q 037197 321 LIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGL-----CDSGNLTKLILFNNSFSGTFP 395 (1009)
Q Consensus 321 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l-----~~l~~L~~L~l~~N~l~~~~p 395 (1009)
. .+.+. +..+ ...+|++|++++|.+++.+|..+ ..+..|+.++++.|.+ .+|
T Consensus 264 ~-------------------~~~~~-~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p 320 (562)
T 3a79_B 264 K-------------------CSVKL-FQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFS 320 (562)
T ss_dssp H-------------------HHHHH-HHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSC
T ss_pred H-------------------HHHHH-HHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecC
Confidence 1 00000 1111 12256666666666665555555 4444555555555554 223
Q ss_pred -ccccc---CccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccC--CCc
Q 037197 396 -VSLST---CKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYL--PSS 469 (1009)
Q Consensus 396 -~~l~~---~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--~~~ 469 (1009)
..+.. ..+|+.|++++|.+.... ....+++|++|++++|++++.+|..+..+++|+.|++++|+++++. |..
T Consensus 321 ~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 398 (562)
T 3a79_B 321 KEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALM 398 (562)
T ss_dssp HHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHT
T ss_pred hhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhh
Confidence 22222 256788888888775321 1257788888888888888878888888888888888888888743 456
Q ss_pred ccCCcccchhccccCcccCCcc-cccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCccccccccc
Q 037197 470 ILSIPSLQTFMASHNNLQAKIP-NELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTL 548 (1009)
Q Consensus 470 ~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 548 (1009)
+..+++|+.|++++|++++.+| ..+..+++|+.|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|..+..+++|
T Consensus 399 ~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L 475 (562)
T 3a79_B 399 TKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQAL 475 (562)
T ss_dssp TTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCC
T ss_pred hcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCC
Confidence 7888888888888888887444 4588889999999999999887777664 78999999999998 788888899999
Q ss_pred ceecCCccccccccCcCcCCCCCCcEEecCCCccccCCCC
Q 037197 549 AILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEGPVPS 588 (1009)
Q Consensus 549 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~ 588 (1009)
+.|||++|+|++..+..|..+++|+.|+|++|++++..|.
T Consensus 476 ~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 476 QELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp SEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred CEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 9999999999954444489999999999999999998774
No 38
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.1e-45 Score=402.32 Aligned_cols=252 Identities=23% Similarity=0.366 Sum_probs=190.5
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCC------
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNET------ 770 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~------ 770 (1009)
.+.|+..+.||+|+||+||+|+++.+++.||||++.... .....+.+.+|++++++++|||||+++++|.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 456889999999999999999999999999999996543 3344567779999999999999999999986543
Q ss_pred ------eEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEE
Q 037197 771 ------NVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEAR 844 (1009)
Q Consensus 771 ------~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~k 844 (1009)
+.|+|||||++|+|.++++..... ...++..++.|+.||++||+|||++ +|+||||||+|||++.++.+|
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~-~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTI-EERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCSG-GGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCCC-ChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEE
Confidence 369999999999999999765432 2245667788999999999999999 999999999999999999999
Q ss_pred EcccccceecccCCC------------ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCc
Q 037197 845 IADFGLARMMLHKNE------------TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSK 912 (1009)
Q Consensus 845 l~DfGls~~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~ 912 (1009)
|+|||+|+....... .....+||+.|||||++.+..++.++|||||||++|||++ ||.. ..
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~----~~ 231 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFST----QM 231 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSS----HH
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCC----cc
Confidence 999999987644321 1223579999999999999999999999999999999996 7752 11
Q ss_pred cHHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 913 DIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
+....+.. +.... ..+ ...........++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~-~~~~~-----~p~-------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 232 ERVRTLTD-VRNLK-----FPP-------LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHHH-HHTTC-----CCH-------HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHH-HhcCC-----CCC-------CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111111 11111 111 11122234557889999999999999999976
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=6.7e-45 Score=437.47 Aligned_cols=453 Identities=21% Similarity=0.226 Sum_probs=339.3
Q ss_pred eEEeccccccccccccccccCCCCCeEecccCcccccCCccccccCccCcccccccccCCCCCCCCCCCcCCeEEecCCC
Q 037197 69 EKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSN 148 (1009)
Q Consensus 69 ~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n 148 (1009)
+.+|++++++++ +|..+. ++|++|+|++|.+++..|..++++++|++|+|++|++++..|..++.+++|++|+|++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 789999999996 666554 89999999999999888899999999999999999999888999999999999999999
Q ss_pred CCCCCCCccccCCCCCCeeeccCCccCC-cCCccccCccccceeeeccccccccCCccCCCCcch--hhhhcccccc--c
Q 037197 149 NFSGFLPEDLGNATSLESLDFRGSFFEG-SVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSL--ETIILGYNAF--E 223 (1009)
Q Consensus 149 ~l~~~~p~~l~~l~~L~~L~L~~n~~~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L--~~L~L~~n~l--~ 223 (1009)
+++ .+|.. .+++|++|+|++|.+++ ..|..|+++++|++|+|++|++++. .+..+++| ++|++++|++ +
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~ 184 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIK 184 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccccc
Confidence 999 67766 89999999999999997 3578999999999999999999863 45555565 9999999999 8
Q ss_pred ccCCccccCCC-CccEEEeccCccccccCc-ccCCCCCCcEEEcccCCc-----CCCCCcccccccccccccccccccCC
Q 037197 224 GEIPAEFGNLT-NLRYLDLAVGSLSGQIPP-ALGRLKKLTTVYLYKNNF-----TGKIPPELGSITSLAFLDLSDNQISG 296 (1009)
Q Consensus 224 ~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~-~l~~l~~L~~L~L~~n~l-----~~~~~~~~~~l~~L~~L~Ls~N~l~~ 296 (1009)
+..|..|..+. ..-.++++.|.+.+.++. .+..+++|+.|++++|.. .+ ....+..+++|+.|+++++.+++
T Consensus 185 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~~ 263 (562)
T 3a79_B 185 GGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETTW 263 (562)
T ss_dssp SSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEECH
T ss_pred ccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCcCcH
Confidence 88999998876 222668899998876654 467889999999999862 22 22346778889999999888764
Q ss_pred Ccchhh---hcccCCCeEeccccccCCCCCcCC-----CCCCcccEEEccCCccCccCC-ccccC---CCCCceeeccCc
Q 037197 297 EIPVKL---AELKNLQLLNLMCNQLTGLIPDKL-----GELTKLEVLELWKNSLIGSLP-MRLGQ---SSPLRRLDASSN 364 (1009)
Q Consensus 297 ~~~~~l---~~l~~L~~L~L~~N~l~~~~~~~l-----~~l~~L~~L~L~~N~l~~~~~-~~~~~---~~~L~~L~Ls~N 364 (1009)
.....+ ...++|++|++++|.+++.+|..+ .+++.|+.+++..|.+ .+| ..+.. ..+|+.|++++|
T Consensus 264 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n 341 (562)
T 3a79_B 264 KCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDT 341 (562)
T ss_dssp HHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESS
T ss_pred HHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCC
Confidence 322111 123489999999999998888777 6777777777777665 233 11111 134555555555
Q ss_pred cccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccc--cC
Q 037197 365 LLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTG--QI 442 (1009)
Q Consensus 365 ~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~ 442 (1009)
.+.... + ...+++|++|++++|++++.+|..++++++|++|+|++|++++ .+
T Consensus 342 ~~~~~~---~-----------------------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 395 (562)
T 3a79_B 342 PFIHMV---C-----------------------PPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKV 395 (562)
T ss_dssp CCCCCC---C-----------------------CSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHH
T ss_pred Cccccc---C-----------------------ccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccc
Confidence 543211 1 1345555566666666655555666666666666666666654 22
Q ss_pred CcCCcCCCCCcEEecccCcccc-cCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCcccccc
Q 037197 443 PDDISLSTSLSFVDISWNHLES-YLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASC 521 (1009)
Q Consensus 443 p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l 521 (1009)
|..+..+++|+.|++++|++++ +.+..+..+++|++|++++|++++.+|..+. ++|+.|||++|+|+ .+|..+..+
T Consensus 396 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l 472 (562)
T 3a79_B 396 ALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHL 472 (562)
T ss_dssp HHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSS
T ss_pred hhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCC
Confidence 3456666666666666666666 3334466667777777777777665555544 68888999999888 677766688
Q ss_pred ccceeeeecCcccccCCCcc-cccccccceecCCccccccccC
Q 037197 522 EKLVSLNLRNNRFSGEIPKA-VATMPTLAILDMSNNSLFGRIP 563 (1009)
Q Consensus 522 ~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p 563 (1009)
++|+.|+|++|+|+ .+|.. +..+++|+.|+|++|++++..|
T Consensus 473 ~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 473 QALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp CCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred CCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 89999999999998 56655 8888999999999999887665
No 40
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.1e-44 Score=402.17 Aligned_cols=263 Identities=22% Similarity=0.303 Sum_probs=203.1
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEc------CCe
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHN------ETN 771 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~------~~~ 771 (1009)
++|+..+.||+|+||+||+|+++.+|+.||||++++........+.+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 46889999999999999999999999999999997766556666778899999999999999999998753 367
Q ss_pred EEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccc
Q 037197 772 VMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLA 851 (1009)
Q Consensus 772 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls 851 (1009)
+|+|||||+ |+|.+++..... +++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~~----l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQP----LTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSSC----CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeCCC-CCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence 899999996 679999976532 88999999999999999999999 9999999999999999999999999999
Q ss_pred eecccCC----CceeeecccCcccCCcccCCC-CCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcc
Q 037197 852 RMMLHKN----ETVSMVAGSYGYIAPEYGYTL-KVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNK 926 (1009)
Q Consensus 852 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 926 (1009)
+.+.... ......+||+.|+|||++.+. .++.++||||+||++|||++|+.||... +....+........
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~-----~~~~~l~~I~~~~g 280 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK-----NYVHQLQLIMMVLG 280 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS-----SHHHHHHHHHHHHC
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC-----CHHHHHHHHHHhcC
Confidence 8764322 234457899999999987765 5689999999999999999999999732 22222222221111
Q ss_pred ccccccCcc------------ccccCchHHH-----HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 927 AQDEALDPS------------IAGQCKHVQE-----EMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 927 ~~~~~~~~~------------~~~~~~~~~~-----~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
......... +........+ ...++.+++.+||..||++|||+.|+++
T Consensus 281 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 281 TPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp CCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 111000000 0000000000 1134567899999999999999999875
No 41
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.8e-44 Score=399.20 Aligned_cols=295 Identities=30% Similarity=0.491 Sum_probs=230.9
Q ss_pred cChHHhHHHHHHHHhhccCCCCCCCCCCCCCccccCCcCCce--eeeEEeCCC---CceeEEecccccccc--ccccccc
Q 037197 15 SNADDELSTLLSIKAGLIDPLNMLEDWKMPSNAAENGLLHCN--WTGVWCNSR---GFVEKLDLSNMSLNG--SVSENIR 87 (1009)
Q Consensus 15 ~~~~~~~~~ll~~k~~~~d~~~~l~~W~~~~~~~~~~~~~C~--w~gv~C~~~---~~v~~l~l~~~~l~~--~~~~~l~ 87 (1009)
.|.++|++||++||+++.||. .+++|.. +.+||. |.||+|+.. ++|++|+|++++++| .+|+.+.
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~-------~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~ 73 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLP-------TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLA 73 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCT-------TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGG
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCC-------CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHh
Confidence 588999999999999999987 7999964 346888 999999864 799999999999998 8888899
Q ss_pred cCCCCCeEeccc-CcccccCCccccccCccCcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCe
Q 037197 88 GLRSLSSLNICC-NEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLES 166 (1009)
Q Consensus 88 ~l~~L~~L~L~~-n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~ 166 (1009)
++++|++|+|++ |.+.+.+|..++++++|++|+|++|.+++.+|..++++++|++|+|++|.+++.+|..++.+++|++
T Consensus 74 ~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 153 (313)
T 1ogq_A 74 NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVG 153 (313)
T ss_dssp GCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCE
T ss_pred CCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCe
Confidence 999999999984 8888888888888888999998888888888888888888888888888888888888888888888
Q ss_pred eeccCCccCCcCCccccCcc-ccceeeeccccccccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEeccCc
Q 037197 167 LDFRGSFFEGSVPTSFRNLQ-KLKFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGS 245 (1009)
Q Consensus 167 L~L~~n~~~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 245 (1009)
|++++|.+++.+|..+.+++ +|++|+|++|++++.+|..++.++ |++|+|++|++++..|..|+++++|++|+|++|.
T Consensus 154 L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 232 (313)
T 1ogq_A 154 ITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNS 232 (313)
T ss_dssp EECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSE
T ss_pred EECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCc
Confidence 88888888777787777776 778888888887777777777776 7777777777777777777777777777777777
Q ss_pred cccccCcccCCCCCCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCCCeEeccccc-cCC
Q 037197 246 LSGQIPPALGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQ-LTG 320 (1009)
Q Consensus 246 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~-l~~ 320 (1009)
+++.+|. +..+++|++|+|++|++++.+|..+..+++|++|+|++|++++.+|.. ..+++|+.|++++|+ +.|
T Consensus 233 l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 233 LAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp ECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEES
T ss_pred eeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccC
Confidence 7655544 566666666666666666666666666666666666666666655554 556666666666665 443
No 42
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=7.4e-44 Score=413.96 Aligned_cols=421 Identities=25% Similarity=0.339 Sum_probs=226.4
Q ss_pred cCCCCCeEecccCcccccCCccccccCccCcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCee
Q 037197 88 GLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESL 167 (1009)
Q Consensus 88 ~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L 167 (1009)
..++|++|++++|.+ +.+|++++++++|++|++++|.+.|.+|..++++.+|+.++++.|.. .+|++|
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L 76 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHEL 76 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEE
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEE
Confidence 468899999999999 88999999999999999999999999999999998887777765542 457778
Q ss_pred eccCCccCCcCCccccCccccceeeeccccccccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEeccCccc
Q 037197 168 DFRGSFFEGSVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLS 247 (1009)
Q Consensus 168 ~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 247 (1009)
++++|.+++ +|.. .++|++|++++|.+++ +|.. +++|++|++++|++++ ++.. .++|++|++++|+++
T Consensus 77 ~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~ 144 (454)
T 1jl5_A 77 ELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLE 144 (454)
T ss_dssp ECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCS
T ss_pred EecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCC
Confidence 888887774 3332 3678888888888885 5643 3678888888888874 2221 167888888888888
Q ss_pred cccCcccCCCCCCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCC
Q 037197 248 GQIPPALGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLG 327 (1009)
Q Consensus 248 ~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~ 327 (1009)
+ +| .++++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .++.+++|++|++++|++++. |...
T Consensus 145 ~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l-~~~~- 214 (454)
T 1jl5_A 145 K-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKL-PDLP- 214 (454)
T ss_dssp S-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSC-CCCC-
T ss_pred C-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcC-CCCc-
Confidence 5 56 58888888888888888885 55433 478888888888875 45 577788888888888888763 3322
Q ss_pred CCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccCCcCccCCCCCceeecccccccccCCcccccCccccEE
Q 037197 328 ELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRV 407 (1009)
Q Consensus 328 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L 407 (1009)
++|+.|++++|.+. .+| .++.+++|+.|++++|.+++ +|.. +++|+.|++++|++++ +|.. .++|+.|
T Consensus 215 --~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L 282 (454)
T 1jl5_A 215 --LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFL 282 (454)
T ss_dssp --TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEE
T ss_pred --CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEE
Confidence 46777777777776 445 36677777777777777764 3332 2566777777776664 3332 2566666
Q ss_pred EcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCccc
Q 037197 408 RVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQ 487 (1009)
Q Consensus 408 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 487 (1009)
++++|++++ +|.. .++|+.|++++|++++ ++. ..++|+.|++++|++++ +|.. +++|+.|++++|+++
T Consensus 283 ~ls~N~l~~-l~~~---~~~L~~L~l~~N~l~~-i~~---~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~ 350 (454)
T 1jl5_A 283 DVSENIFSG-LSEL---PPNLYYLNASSNEIRS-LCD---LPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA 350 (454)
T ss_dssp ECCSSCCSE-ESCC---CTTCCEEECCSSCCSE-ECC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS
T ss_pred ECcCCccCc-ccCc---CCcCCEEECcCCcCCc-ccC---CcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc
Confidence 666666664 1211 1456666666666653 221 11356666666666665 2322 345555555555555
Q ss_pred CCcccccccCCcCcEEEeecCCCCC--CCCccccccccceeeeecCcccccCCCcccccccccceecCCcccccc--ccC
Q 037197 488 AKIPNELQACPSLSVLDLSSNSLSG--EIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFG--RIP 563 (1009)
Q Consensus 488 ~~~p~~~~~l~~L~~LdLs~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p 563 (1009)
+ +|. .+++|+.|||++|++++ .+|.++.. |+.|++.|.+|.. +++|+.||+++|++++ .+|
T Consensus 351 ~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP 415 (454)
T 1jl5_A 351 E-VPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIP 415 (454)
T ss_dssp C-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC--------------------------------
T ss_pred c-ccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCCccccch
Confidence 3 333 24555555555555554 44444332 2234444455442 3455566666666655 444
Q ss_pred cCcCCCCCCcEEecCCCccccCCC
Q 037197 564 ENFGASPALEMLNLSYNKLEGPVP 587 (1009)
Q Consensus 564 ~~~~~l~~L~~L~ls~N~l~g~ip 587 (1009)
.+ ++.|.+++|.+.+++|
T Consensus 416 ~s------l~~L~~~~~~~~~~~~ 433 (454)
T 1jl5_A 416 ES------VEDLRMNSERVVDPYE 433 (454)
T ss_dssp ------------------------
T ss_pred hh------HhheeCcCcccCCccc
Confidence 33 3334455555555544
No 43
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.4e-42 Score=401.33 Aligned_cols=424 Identities=24% Similarity=0.294 Sum_probs=264.1
Q ss_pred CceeEEeccccccccccccccccCCCCCeEecccCcccccCCccccccCccCcccccccccCCCCCCCCCCCcCCeEEec
Q 037197 66 GFVEKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNA 145 (1009)
Q Consensus 66 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 145 (1009)
.+++.|+++++.+ |.+|+.++++++|++|++++|.+.+.+|..++++++|+++++++|.. .++++|++
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L~l 78 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHELEL 78 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEEEC
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEEEe
Confidence 4688999999999 89999999999999999999999999999999999998888877753 46788888
Q ss_pred CCCCCCCCCCccccCCCCCCeeeccCCccCCcCCccccCccccceeeeccccccccCCccCCCCcchhhhhccccccccc
Q 037197 146 SSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGE 225 (1009)
Q Consensus 146 s~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 225 (1009)
++|++++ +|.. .++|++|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|++++
T Consensus 79 ~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~- 145 (454)
T 1jl5_A 79 NNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK- 145 (454)
T ss_dssp TTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-
T ss_pred cCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-
Confidence 8888875 3432 3678888888888876 5543 3678888888888874 3321 1578888888888885
Q ss_pred CCccccCCCCccEEEeccCccccccCcccCCCCCCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcc
Q 037197 226 IPAEFGNLTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAEL 305 (1009)
Q Consensus 226 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l 305 (1009)
+| +|+++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .+..+++|++|++++|++++ +|...
T Consensus 146 lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~--- 214 (454)
T 1jl5_A 146 LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP--- 214 (454)
T ss_dssp CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---
T ss_pred Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---
Confidence 66 58888888888888888875 45433 478888888888886 55 57888888888888888875 44322
Q ss_pred cCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccCCcCccCCCCCceeec
Q 037197 306 KNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLIL 385 (1009)
Q Consensus 306 ~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l 385 (1009)
++|++|++++|+++. +| .++.+++|++|++++|++++ +|. ...+|+.|++++|.+++ +|.. .++|+.|++
T Consensus 215 ~~L~~L~l~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-l~~---~~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l 284 (454)
T 1jl5_A 215 LSLESIVAGNNILEE-LP-ELQNLPFLTTIYADNNLLKT-LPD---LPPSLEALNVRDNYLTD-LPEL---PQSLTFLDV 284 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCS---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEEC
T ss_pred CcccEEECcCCcCCc-cc-ccCCCCCCCEEECCCCcCCc-ccc---cccccCEEECCCCcccc-cCcc---cCcCCEEEC
Confidence 478888888888884 45 37888888888888888875 333 23678888888888885 4443 367888999
Q ss_pred ccccccccCCcccccCccccEEEcccCccccccCCccCCC-CcccEEEeecccccccCCcCCcCCCCCcEEecccCcccc
Q 037197 386 FNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNL-PSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLES 464 (1009)
Q Consensus 386 ~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 464 (1009)
++|++++. |.. .++|+.|++++|++++ ++ .+ ++|++|++++|++++ +|.. +++|+.|++++|++++
T Consensus 285 s~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~ 351 (454)
T 1jl5_A 285 SENIFSGL-SEL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE 351 (454)
T ss_dssp CSSCCSEE-SCC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC
T ss_pred cCCccCcc-cCc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc
Confidence 99888862 211 2678899999998884 22 23 478999999999985 6654 5789999999999987
Q ss_pred cCCCcccCCcccchhccccCcccC--CcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCccccc--CCCc
Q 037197 465 YLPSSILSIPSLQTFMASHNNLQA--KIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSG--EIPK 540 (1009)
Q Consensus 465 ~~~~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~ 540 (1009)
+ |. .+++|+.|++++|++++ .+|..++ +|+.|.+.+.+|.. +++|+.|+|++|++++ .+|.
T Consensus 352 l-p~---~l~~L~~L~L~~N~l~~l~~ip~~l~--------~L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~ 416 (454)
T 1jl5_A 352 V-PE---LPQNLKQLHVEYNPLREFPDIPESVE--------DLRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPE 416 (454)
T ss_dssp C-CC---CCTTCCEEECCSSCCSSCCCCCTTCC--------EEECCC---------------------------------
T ss_pred c-cc---hhhhccEEECCCCCCCcCCCChHHHH--------hhhhcccccccccc---cCcCCEEECCCCcCCccccchh
Confidence 4 44 47889999999999988 6676655 34568888888874 5789999999999987 6665
Q ss_pred ccccccccceecCCccccccccCcCcCCC
Q 037197 541 AVATMPTLAILDMSNNSLFGRIPENFGAS 569 (1009)
Q Consensus 541 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 569 (1009)
+ |+.|.+.+|.+.+.+|......
T Consensus 417 s------l~~L~~~~~~~~~~~~~~~~~~ 439 (454)
T 1jl5_A 417 S------VEDLRMNSERVVDPYEFAHETT 439 (454)
T ss_dssp -----------------------------
T ss_pred h------HhheeCcCcccCCccccCHHHh
Confidence 4 5667889999988887665443
No 44
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=7.8e-43 Score=408.73 Aligned_cols=394 Identities=19% Similarity=0.211 Sum_probs=273.1
Q ss_pred CeeeccCCccCCcCCccccCccccceeeeccccccccCCccCCCCcchhhhhcccccccccC-CccccCCCCccEEEecc
Q 037197 165 ESLDFRGSFFEGSVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEI-PAEFGNLTNLRYLDLAV 243 (1009)
Q Consensus 165 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~ 243 (1009)
+.++.+++.++ .+|. +. ++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ +..|+++++|++|+|++
T Consensus 13 ~~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 35666666666 4454 22 66777777777777766777777777777777777776444 45677777777777777
Q ss_pred CccccccCcccCCCCCCcEEEcccCCcCCCCCcc--cccccccccccccccccCCCcchh-hhcccCCCeEeccccccCC
Q 037197 244 GSLSGQIPPALGRLKKLTTVYLYKNNFTGKIPPE--LGSITSLAFLDLSDNQISGEIPVK-LAELKNLQLLNLMCNQLTG 320 (1009)
Q Consensus 244 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~-l~~l~~L~~L~L~~N~l~~ 320 (1009)
|++++..|..|+++++|++|+|++|.+++..+.. +..+++|++|+|++|++++..|.. +..+++|++|++++|++++
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 168 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc
Confidence 7777777777777777777777777776544333 666777777777777777665554 6667777777777777776
Q ss_pred CCCcCCCCC--CcccEEEccCCccCccCCccccCCCCCceeeccCccccccCCcCccCCCCCceeecccccccccCCccc
Q 037197 321 LIPDKLGEL--TKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSL 398 (1009)
Q Consensus 321 ~~~~~l~~l--~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l 398 (1009)
..+..+..+ .+|+.|++++|.+.+..+..++. .....+..+++|+.|++++|++++..|..+
T Consensus 169 ~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~----------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~ 232 (455)
T 3v47_A 169 ICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW----------------EKCGNPFKNTSITTLDLSGNGFKESMAKRF 232 (455)
T ss_dssp CCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH----------------HHHCCTTTTCEEEEEECTTSCCCHHHHHHH
T ss_pred cChhhhhccccccccccccccCcccccchhhccc----------------cccccccccceeeeEecCCCcccccchhhh
Confidence 666666554 45666666666655433322110 000112233445555555555555444444
Q ss_pred ccC---ccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcC--CCCCcEEecccCcccccCCCcccCC
Q 037197 399 STC---KSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISL--STSLSFVDISWNHLESYLPSSILSI 473 (1009)
Q Consensus 399 ~~~---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~--l~~L~~L~Ls~N~l~~~~~~~~~~l 473 (1009)
... ++|+.|++++|.+.+... ..+.+.+..+..+.. .++|+.|++++|++++..|..|..+
T Consensus 233 ~~~~~~~~L~~L~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 298 (455)
T 3v47_A 233 FDAIAGTKIQSLILSNSYNMGSSF--------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHF 298 (455)
T ss_dssp HHHTTTCCEEEEECTTCTTTSCCT--------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTC
T ss_pred hccccccceeeEeecccccccccc--------------chhhhccCcccccccccccCceEEEecCccccccchhhcccC
Confidence 333 555666666555442211 111222222222222 2577888888888888778888888
Q ss_pred cccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecC
Q 037197 474 PSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDM 553 (1009)
Q Consensus 474 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 553 (1009)
++|++|++++|++++..|..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|+.|+|
T Consensus 299 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 378 (455)
T 3v47_A 299 TDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELAL 378 (455)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEEC
Confidence 88888888888888777888888999999999999998888888999999999999999999888999999999999999
Q ss_pred CccccccccCcCcCCCCCCcEEecCCCccccCCCCCCcc
Q 037197 554 SNNSLFGRIPENFGASPALEMLNLSYNKLEGPVPSNGIL 592 (1009)
Q Consensus 554 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~ 592 (1009)
++|++++..+..|..+++|++|+|++|++++.+|....+
T Consensus 379 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l 417 (455)
T 3v47_A 379 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYL 417 (455)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHH
T ss_pred CCCccccCCHhHhccCCcccEEEccCCCcccCCCcchHH
Confidence 999999888888899999999999999999999965444
No 45
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=5.1e-42 Score=401.80 Aligned_cols=385 Identities=18% Similarity=0.186 Sum_probs=223.6
Q ss_pred cccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCCcC-CccccCccccceeeeccc
Q 037197 118 SMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSV-PTSFRNLQKLKFLGLSGN 196 (1009)
Q Consensus 118 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~-p~~~~~l~~L~~L~L~~n 196 (1009)
.++.+++.++ .+|. + .++|++|+|++|.+++..|..++++++|++|+|++|.+.+.+ +..|.++++|++|+|++|
T Consensus 14 ~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n 89 (455)
T 3v47_A 14 NAICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN 89 (455)
T ss_dssp EEECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTC
T ss_pred ccCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCC
Confidence 3445555443 3333 2 145555555555555555555555555555555555554333 334555555555555555
Q ss_pred cccccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEeccCccccccCcccCCCCCCcEEEcccCCcCCCCCc
Q 037197 197 NLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKIPP 276 (1009)
Q Consensus 197 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~ 276 (1009)
++++..|..|+++++|++|+|++|++++..+.. ..++.+++|++|+|++|.+++..|.
T Consensus 90 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~----------------------~~~~~l~~L~~L~L~~n~l~~~~~~ 147 (455)
T 3v47_A 90 QFLQLETGAFNGLANLEVLTLTQCNLDGAVLSG----------------------NFFKPLTSLEMLVLRDNNIKKIQPA 147 (455)
T ss_dssp TTCEECTTTTTTCTTCCEEECTTSCCBTHHHHS----------------------STTTTCTTCCEEECCSSBCCSCCCC
T ss_pred ccCccChhhccCcccCCEEeCCCCCCCccccCc----------------------ccccCcccCCEEECCCCccCccCcc
Confidence 555444444554555555555554444433222 1244455555555555555544444
Q ss_pred c-cccccccccccccccccCCCcchhhhcc--cCCCeEeccccccCCCCCcC--------CCCCCcccEEEccCCccCcc
Q 037197 277 E-LGSITSLAFLDLSDNQISGEIPVKLAEL--KNLQLLNLMCNQLTGLIPDK--------LGELTKLEVLELWKNSLIGS 345 (1009)
Q Consensus 277 ~-~~~l~~L~~L~Ls~N~l~~~~~~~l~~l--~~L~~L~L~~N~l~~~~~~~--------l~~l~~L~~L~L~~N~l~~~ 345 (1009)
. +.++++|++|+|++|++++..+..+..+ .+|+.|++++|.+.+..+.. +..+++|+.|++++|.+++.
T Consensus 148 ~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~ 227 (455)
T 3v47_A 148 SFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKES 227 (455)
T ss_dssp GGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHH
T ss_pred cccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCccccc
Confidence 3 4455555555555555555555555444 45566666666665544333 23556777777777777766
Q ss_pred CCccccCC---CCCceeeccCccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCccccccCCcc
Q 037197 346 LPMRLGQS---SPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGL 422 (1009)
Q Consensus 346 ~~~~~~~~---~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~ 422 (1009)
.|..+... .+|+.|++++|.+.+.. +..+.+....+..+..+
T Consensus 228 ~~~~~~~~~~~~~L~~L~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~~--------------------- 272 (455)
T 3v47_A 228 MAKRFFDAIAGTKIQSLILSNSYNMGSS--------------FGHTNFKDPDNFTFKGL--------------------- 272 (455)
T ss_dssp HHHHHHHHTTTCCEEEEECTTCTTTSCC--------------TTCCSSCCCCTTTTGGG---------------------
T ss_pred chhhhhccccccceeeEeeccccccccc--------------cchhhhccCcccccccc---------------------
Confidence 66555433 55666666666554321 11111211111111111
Q ss_pred CCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcE
Q 037197 423 GNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSV 502 (1009)
Q Consensus 423 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 502 (1009)
..++|+.|++++|++++.+|..+..+++|+.|+|++|++++..|..|..+++|+.|++++|++++..|..|..+++|+.
T Consensus 273 -~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 351 (455)
T 3v47_A 273 -EASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEV 351 (455)
T ss_dssp -TTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCE
T ss_pred -cccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCE
Confidence 1245556666666666555666666666666666666666666666666666777777777776666777778888888
Q ss_pred EEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCccccccccCc
Q 037197 503 LDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPE 564 (1009)
Q Consensus 503 LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 564 (1009)
|||++|++++..|..|..+++|++|+|++|+|++..+..+..+++|+.|+|++|++++.+|.
T Consensus 352 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 352 LDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp EECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred EECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 88888888877788888888888888888888876666778888888888888888887773
No 46
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.9e-42 Score=385.98 Aligned_cols=198 Identities=24% Similarity=0.375 Sum_probs=170.0
Q ss_pred HHHhcCCcCceeccCCceEEEEEEEC---CCCeEEEEEEcccCCCChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCC
Q 037197 695 EILACVKESNIIGMGGNGIVYKAEFH---RPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNET 770 (1009)
Q Consensus 695 ~~~~~~~~~~~iG~G~~g~Vyk~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~ 770 (1009)
++.+.|+..+.||+|+||+||+|+++ .+++.||||++... ....++.+|+++++.+ +||||+++++++.+.+
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~----~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~ 93 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT----SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKND 93 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT----SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc----cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECC
Confidence 45678999999999999999999875 45789999998543 2345677999999998 6999999999999999
Q ss_pred eEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCC-CcEEEcccc
Q 037197 771 NVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDAN-LEARIADFG 849 (1009)
Q Consensus 771 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~DfG 849 (1009)
++|+||||+++|+|.++++. +++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||
T Consensus 94 ~~~lvmE~~~g~~L~~~~~~-------l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFG 163 (361)
T 4f9c_A 94 HVVIAMPYLEHESFLDILNS-------LSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFG 163 (361)
T ss_dssp EEEEEEECCCCCCHHHHHTT-------CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEEEEEeCCCcccHHHHHcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCC
Confidence 99999999999999999842 67888899999999999999999 99999999999999877 799999999
Q ss_pred cceecccCC----------------------------CceeeecccCcccCCcccCCC-CCCcccchHhHHHHHHHHHhC
Q 037197 850 LARMMLHKN----------------------------ETVSMVAGSYGYIAPEYGYTL-KVDEKSDIYSFGVVLLELLTG 900 (1009)
Q Consensus 850 ls~~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlGvvl~elltg 900 (1009)
+|+...... ......+||+.|+|||++.+. .++.++||||+||++|||++|
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G 243 (361)
T 4f9c_A 164 LAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG 243 (361)
T ss_dssp TCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHT
T ss_pred CCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHC
Confidence 998653321 112345799999999998765 489999999999999999999
Q ss_pred CCCCCC
Q 037197 901 KMPLDP 906 (1009)
Q Consensus 901 ~~Pf~~ 906 (1009)
+.||..
T Consensus 244 ~~Pf~~ 249 (361)
T 4f9c_A 244 RYPFYK 249 (361)
T ss_dssp CSSSSC
T ss_pred CCCCCC
Confidence 999964
No 47
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.2e-41 Score=404.29 Aligned_cols=254 Identities=20% Similarity=0.288 Sum_probs=208.5
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
+.++|+..+.||+|+||.||+|.++.+|+.||+|++... .....+.+.+|+++|+.++|||||+++++|.+...+|+|
T Consensus 155 il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~--~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP--HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred CccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc--chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 457899999999999999999999999999999998654 234456677999999999999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCC--CcEEEccccccee
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDAN--LEARIADFGLARM 853 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~--~~~kl~DfGls~~ 853 (1009)
||||+||+|.+++..... .+++.++..++.||+.||+|||++ +|+||||||+||+++.+ +.+||+|||+|+.
T Consensus 233 ~E~~~gg~L~~~i~~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~ 306 (573)
T 3uto_A 233 YEFMSGGELFEKVADEHN---KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAH 306 (573)
T ss_dssp EECCCCCBHHHHHTCTTS---CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEE
T ss_pred EeecCCCcHHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeE
Confidence 999999999999865432 288999999999999999999999 99999999999999854 8999999999998
Q ss_pred cccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccC
Q 037197 854 MLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALD 933 (1009)
Q Consensus 854 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (1009)
+.. .......+||+.|||||++.+..|+.++||||+||++|||++|+.||... +..+.+......... +.
T Consensus 307 ~~~-~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~-----~~~~~~~~i~~~~~~----~~ 376 (573)
T 3uto_A 307 LDP-KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE-----NDDETLRNVKSCDWN----MD 376 (573)
T ss_dssp CCT-TSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS-----SHHHHHHHHHTTCCC----CC
T ss_pred ccC-CCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----CHHHHHHHHHhCCCC----CC
Confidence 743 34455678999999999999999999999999999999999999999732 222232222221111 11
Q ss_pred ccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 934 PSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 934 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.......+ .++.+++.+||+.||++||++.|+++
T Consensus 377 ~~~~~~~s------~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 377 DSAFSGIS------EDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp SGGGTTSC------HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cccccCCC------HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11111111 23557888999999999999999986
No 48
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=4.9e-42 Score=402.69 Aligned_cols=250 Identities=24% Similarity=0.232 Sum_probs=198.5
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCC----CChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSD----NDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~----~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 773 (1009)
+.|+..++||+|+||.||+|+++.+|+.||||++.+.. ........+..++.+++.++|||||+++++|++.+.+|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 56889999999999999999999999999999996432 11122223334567788889999999999999999999
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
+|||||+||+|.+++..... +++..+..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.
T Consensus 269 lVmEy~~GGdL~~~l~~~~~----l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHGV----FSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEECCCCSCBHHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEecCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeee
Confidence 99999999999999975432 78899999999999999999999 999999999999999999999999999987
Q ss_pred cccCCCceeeecccCcccCCcccCC-CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccccc
Q 037197 854 MLHKNETVSMVAGSYGYIAPEYGYT-LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEAL 932 (1009)
Q Consensus 854 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1009)
+... .....+||+.|||||++.. ..|+.++||||+||++|||++|+.||...... +..+.... +....
T Consensus 342 ~~~~--~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~--~~~~i~~~-i~~~~------ 410 (689)
T 3v5w_A 342 FSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DKHEIDRM-TLTMA------ 410 (689)
T ss_dssp CSSC--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC--CHHHHHHH-HHHCC------
T ss_pred cCCC--CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHh-hcCCC------
Confidence 6432 3345689999999999864 57999999999999999999999999743222 22222222 21111
Q ss_pred CccccccCchHHHHHHHHHHHHHHhccCCCCCCCC-----HHHHH
Q 037197 933 DPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPT-----MRDVI 972 (1009)
Q Consensus 933 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs-----~~evl 972 (1009)
..+....+ .++..++.+|++.||++|++ +.|+.
T Consensus 411 -~~~p~~~S------~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~ 448 (689)
T 3v5w_A 411 -VELPDSFS------PELRSLLEGLLQRDVNRRLGCLGRGAQEVK 448 (689)
T ss_dssp -CCCCTTSC------HHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred -CCCCccCC------HHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence 11111111 23567889999999999998 56654
No 49
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.3e-40 Score=368.66 Aligned_cols=278 Identities=32% Similarity=0.542 Sum_probs=227.2
Q ss_pred HHHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEE
Q 037197 694 SEILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 694 ~~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 773 (1009)
....++|+..+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|++++++++||||+++++++.+++..+
T Consensus 35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (321)
T 2qkw_B 35 EEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPES--SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMI 111 (321)
T ss_dssp CCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCC--SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCE
T ss_pred HHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEE
Confidence 345678999999999999999999976 48899999985542 334566779999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
+||||+++|+|.+++.........+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 112 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 188 (321)
T 2qkw_B 112 LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKK 188 (321)
T ss_dssp EEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEE
T ss_pred EEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccccc
Confidence 99999999999999977654445589999999999999999999998 999999999999999999999999999986
Q ss_pred cccCC--CceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCC-CccHHHHHHHHHhhcccccc
Q 037197 854 MLHKN--ETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGG-SKDIVEWVLSMIKSNKAQDE 930 (1009)
Q Consensus 854 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~ 930 (1009)
..... .......||+.|+|||+..+..++.++||||||+++|||++|+.||...... ......|.......+. ...
T Consensus 189 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 267 (321)
T 2qkw_B 189 GTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ-LEQ 267 (321)
T ss_dssp CSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC-CCS
T ss_pred cccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc-HHH
Confidence 54322 2233456899999999988888999999999999999999999999754332 3345555544433322 334
Q ss_pred ccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCC
Q 037197 931 ALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKP 980 (1009)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 980 (1009)
..++.+.... ..+....+.+++.+|++.||++|||+.|+++.|+.+.+
T Consensus 268 ~~~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 268 IVDPNLADKI--RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp SSSSSCTTCS--CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcChhhcccc--CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 4444443322 23455678889999999999999999999999998754
No 50
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2.1e-40 Score=364.21 Aligned_cols=252 Identities=21% Similarity=0.314 Sum_probs=208.5
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
..++|+..+.||+|+||+||+|.+..+++.||||++..... ...+.+.+|+.++++++||||+++++++..++..++|
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc--cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 45679999999999999999999999999999999865432 2345677999999999999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
|||+++|+|.+++.... +++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 96 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (297)
T ss_dssp EECCTTCBHHHHHHHSC-----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EECCCCCCHHHHHhhcC-----CCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 99999999999996542 78889999999999999999999 99999999999999999999999999998776
Q ss_pred cCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCcc
Q 037197 856 HKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPS 935 (1009)
Q Consensus 856 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1009)
..........||+.|+|||++.+..++.++||||||+++|||++|+.||... +.............. ....
T Consensus 168 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-----~~~~~~~~~~~~~~~--~~~~-- 238 (297)
T 3fxz_A 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE-----NPLRALYLIATNGTP--ELQN-- 238 (297)
T ss_dssp STTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHHHHHHHHCSC--CCSC--
T ss_pred CcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCC--CCCC--
Confidence 5555555678999999999999889999999999999999999999999632 222222222222211 1111
Q ss_pred ccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 936 IAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 936 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.... ...+.+++.+|++.||++|||+.|+++
T Consensus 239 -~~~~------~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 239 -PEKL------SAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp -GGGS------CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -cccc------CHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1111 124567889999999999999999975
No 51
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.5e-40 Score=371.16 Aligned_cols=286 Identities=37% Similarity=0.623 Sum_probs=230.0
Q ss_pred HHHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEE
Q 037197 694 SEILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 694 ~~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 773 (1009)
....++|+..+.||+|+||.||+|.+.. ++.||||++..... ......+.+|++++++++||||+++++++.+.+..+
T Consensus 26 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 103 (326)
T 3uim_A 26 QVASDNFSNKNILGRGGFGKVYKGRLAD-GTLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 103 (326)
T ss_dssp HTTTTSSCSTTEEECCSSSEEEEECCSS-SCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCE
T ss_pred HHHhhccccceeEecCCCcEEEEEEecC-CCEEEEEEeccccC-chHHHHHHHHHHHHHhccCCCccceEEEEecCCceE
Confidence 3346789999999999999999998654 88999999965432 222335779999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
+||||+++|+|.++++........+++..++.++.|++.||+|||+.+.++|+||||||+||+++.++.+||+|||+++.
T Consensus 104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 183 (326)
T 3uim_A 104 LVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 183 (326)
T ss_dssp EEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccc
Confidence 99999999999999988766666689999999999999999999998777999999999999999999999999999987
Q ss_pred cccCCC-ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCC---CCCCCccHHHHHHHHHhhccccc
Q 037197 854 MLHKNE-TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDP---AFGGSKDIVEWVLSMIKSNKAQD 929 (1009)
Q Consensus 854 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~---~~~~~~~~~~~~~~~~~~~~~~~ 929 (1009)
...... ......||+.|+|||+..+..++.++||||||+++|||++|+.||+. ..........|+........ ..
T Consensus 184 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 262 (326)
T 3uim_A 184 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK-LE 262 (326)
T ss_dssp CCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCC-ST
T ss_pred cCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchh-hh
Confidence 654432 33445699999999998888899999999999999999999999962 12233445555544333222 23
Q ss_pred cccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCccc
Q 037197 930 EALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRRKS 984 (1009)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~~~ 984 (1009)
...+....... ..+....+.+++.+|++.||++|||+.|+++.|++....++.
T Consensus 263 ~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~~~ 315 (326)
T 3uim_A 263 ALVDVDLQGNY--KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERW 315 (326)
T ss_dssp TSSCTTCTTSC--CHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSSSC
T ss_pred hhcChhhcccc--CHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhhhh
Confidence 33444433322 245566788999999999999999999999999986655543
No 52
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.1e-40 Score=366.05 Aligned_cols=263 Identities=32% Similarity=0.459 Sum_probs=204.4
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
.++|+..+.||+|+||.||+|++. ++.||||++..........+.+.+|++++++++||||+++++++.+....++||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEEC--CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 356888999999999999999874 788999999776655666677889999999999999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCC--eEEeccCCCcEEeCCCCcEEEcccccceec
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPP--VIHRDIKSNNILLDANLEARIADFGLARMM 854 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~dlk~~NIll~~~~~~kl~DfGls~~~ 854 (1009)
||+++|+|.++++.... ...+++..++.++.|+++||+|||+. + |+||||||+||+++.++.+||+|||+++..
T Consensus 114 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp ECCTTCBHHHHHHSTTH-HHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred ecCCCCcHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 99999999999976542 22378999999999999999999998 8 999999999999999999999999999865
Q ss_pred ccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCc
Q 037197 855 LHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDP 934 (1009)
Q Consensus 855 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1009)
...........||+.|+|||++.+..++.++||||||+++|||++|+.||... ...+.......... ..
T Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~-----~~~~~~~~~~~~~~------~~ 258 (309)
T 3p86_A 190 ASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL-----NPAQVVAAVGFKCK------RL 258 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS-----CHHHHHHHHHHSCC------CC
T ss_pred cccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhcCC------CC
Confidence 44434445567999999999999989999999999999999999999999732 12222222111111 11
Q ss_pred cccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 935 SIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 935 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
.+....+ ..+.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 259 ~~~~~~~------~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 259 EIPRNLN------PQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp CCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred CCCccCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 1111111 24667889999999999999999999999987543
No 53
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=7.1e-40 Score=380.82 Aligned_cols=374 Identities=20% Similarity=0.207 Sum_probs=242.8
Q ss_pred cCcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCCcCCccccCccccceeeecc
Q 037197 116 LKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLSG 195 (1009)
Q Consensus 116 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~ 195 (1009)
++......+...+..+..++++++|++|++++|.+++. | .++.+++|++|++++|.+++. | ++.+++|++|++++
T Consensus 20 l~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~ 94 (457)
T 3bz5_A 20 FASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDS 94 (457)
T ss_dssp HHHHHHHHTTCCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCS
T ss_pred HHHHHHHhcCcCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcC
Confidence 44444444455555666777888888888888888864 4 678888888888888888764 3 77788888888888
Q ss_pred ccccccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEeccCccccccCcccCCCCCCcEEEcccCCcCCCCC
Q 037197 196 NNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKIP 275 (1009)
Q Consensus 196 n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 275 (1009)
|.+++. + ++++++|++|++++|++++. | ++++++|++|++++|++++. .++.+++|++|++++|...+.+
T Consensus 95 N~l~~~-~--~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~- 164 (457)
T 3bz5_A 95 NKLTNL-D--VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL- 164 (457)
T ss_dssp SCCSCC-C--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC-
T ss_pred CCCcee-e--cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc-
Confidence 888753 3 77777888888888877753 3 77777777777777777763 2667777777777777554444
Q ss_pred cccccccccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCC
Q 037197 276 PELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSP 355 (1009)
Q Consensus 276 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 355 (1009)
.+..+++|++|++++|++++ +| +..+++|+.|++++|++++. .++.+++|+.|++++|++++ +| ++.+++
T Consensus 165 -~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~ 234 (457)
T 3bz5_A 165 -DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQ 234 (457)
T ss_dssp -CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTT
T ss_pred -ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCC
Confidence 35666777777777777764 33 56666677777777766654 25566666666666666655 23 445555
Q ss_pred CceeeccCccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCccccccCCccCCCCcccEEEeec
Q 037197 356 LRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMAN 435 (1009)
Q Consensus 356 L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 435 (1009)
|+.|++++|.+++.. + ..+++|+.|++++|+ |+.|++++
T Consensus 235 L~~L~l~~N~l~~~~---~------------------------~~l~~L~~L~l~~n~--------------L~~L~l~~ 273 (457)
T 3bz5_A 235 LTYFDCSVNPLTELD---V------------------------STLSKLTTLHCIQTD--------------LLEIDLTH 273 (457)
T ss_dssp CSEEECCSSCCSCCC---C------------------------TTCTTCCEEECTTCC--------------CSCCCCTT
T ss_pred CCEEEeeCCcCCCcC---H------------------------HHCCCCCEEeccCCC--------------CCEEECCC
Confidence 555555555555432 2 233344444444332 23344555
Q ss_pred ccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCC
Q 037197 436 NNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIP 515 (1009)
Q Consensus 436 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p 515 (1009)
|++.+.+| ++.+++|+.|++++|.+.+.+|. ..++|+.|++++| ++|+.|+|++|+|++. +
T Consensus 274 n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~ 334 (457)
T 3bz5_A 274 NTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D 334 (457)
T ss_dssp CTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C
T ss_pred CccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c
Confidence 55444444 23455555666666655444442 2344444444433 5777888888888764 2
Q ss_pred ccccccccceeeeecCcccccCCCcccccccccceecCCccccccccCcCcCCCCCCcEEecCCCccccCCCCC
Q 037197 516 ASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEGPVPSN 589 (1009)
Q Consensus 516 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~ 589 (1009)
++.+++|+.|+|++|+|++ ++.|..|++++|.++|. ..+..|..+++++|+|+|.||..
T Consensus 335 --l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 335 --VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp --CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred --cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChh
Confidence 7778888888888888875 35667778888888876 24556777888888888888863
No 54
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.1e-40 Score=367.15 Aligned_cols=250 Identities=25% Similarity=0.350 Sum_probs=207.5
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
.++|+..+.||+|+||.||+|.+..+|+.||||++..........+++.+|+++++.++||||+++++++.+.+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 35688999999999999999999999999999999766555566677889999999999999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
||+++|+|.+++..... +++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~~~~----l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHGR----MKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp CCCTTCBHHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred ECCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 99999999999965432 78889999999999999999999 999999999999999999999999999986643
Q ss_pred CCCceeeecccCcccCCcccCCCCCC-cccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCcc
Q 037197 857 KNETVSMVAGSYGYIAPEYGYTLKVD-EKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPS 935 (1009)
Q Consensus 857 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1009)
. .......||+.|+|||++.+..++ .++||||+||++|||++|+.||... +........ ..+.. .
T Consensus 167 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-----~~~~~~~~i-~~~~~-------~ 232 (328)
T 3fe3_A 167 G-GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-----NLKELRERV-LRGKY-------R 232 (328)
T ss_dssp S-CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHH-HHCCC-------C
T ss_pred C-CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC-----CHHHHHHHH-HhCCC-------C
Confidence 3 334456799999999998877765 7999999999999999999999732 222222222 22211 0
Q ss_pred ccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 936 IAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 936 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
+.... ...+..++.+|++.||++|||+.|+++
T Consensus 233 ~p~~~------s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 233 IPFYM------STDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp CCTTS------CHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred CCCCC------CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11111 123567889999999999999999976
No 55
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=3.9e-40 Score=383.05 Aligned_cols=370 Identities=21% Similarity=0.237 Sum_probs=298.3
Q ss_pred cCcccccCCccccccCccCcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCCcC
Q 037197 99 CNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSV 178 (1009)
Q Consensus 99 ~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~ 178 (1009)
.....+..+..++++++|++|+|++|.+++. | .++.+++|++|+|++|++++. | ++.+++|++|++++|.+++.
T Consensus 27 ~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~- 100 (457)
T 3bz5_A 27 AFEMQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL- 100 (457)
T ss_dssp HTTCCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-
T ss_pred hcCcCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-
Confidence 3445556677899999999999999999874 5 799999999999999999974 4 89999999999999999975
Q ss_pred CccccCccccceeeeccccccccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEeccCccccccCcccCCCC
Q 037197 179 PTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIPPALGRLK 258 (1009)
Q Consensus 179 p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~ 258 (1009)
+ ++++++|++|++++|++++ +| ++.+++|++|++++|++++. .++++++|++|++++|+..+.+ .++.++
T Consensus 101 ~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~ 170 (457)
T 3bz5_A 101 D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQT 170 (457)
T ss_dssp C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCT
T ss_pred e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCC
Confidence 3 8999999999999999996 44 89999999999999999974 3899999999999999766565 588999
Q ss_pred CCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEcc
Q 037197 259 KLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELW 338 (1009)
Q Consensus 259 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 338 (1009)
+|++|++++|++++ +| +..+++|+.|++++|++++. .+..+++|++|++++|++++. | ++.+++|+.|+++
T Consensus 171 ~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i-p--~~~l~~L~~L~l~ 241 (457)
T 3bz5_A 171 QLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI-D--VTPLTQLTYFDCS 241 (457)
T ss_dssp TCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECC
T ss_pred cCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-C--ccccCCCCEEEee
Confidence 99999999999997 45 88899999999999999965 488999999999999999984 5 8899999999999
Q ss_pred CCccCccCCccccCCCCCceeeccCccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCcccccc
Q 037197 339 KNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTI 418 (1009)
Q Consensus 339 ~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~ 418 (1009)
+|++++.. ++.+++|+.|++++|. |+.|++++|.+.+.+| +..+++|+.|++++|.+.+.+
T Consensus 242 ~N~l~~~~---~~~l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l 302 (457)
T 3bz5_A 242 VNPLTELD---VSTLSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLL 302 (457)
T ss_dssp SSCCSCCC---CTTCTTCCEEECTTCC--------------CSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEE
T ss_pred CCcCCCcC---HHHCCCCCEEeccCCC--------------CCEEECCCCccCCccc--ccccccCCEEECCCCccccee
Confidence 99999864 4567788888887763 4566777777666554 344555555555555554444
Q ss_pred CCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCC
Q 037197 419 PVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACP 498 (1009)
Q Consensus 419 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 498 (1009)
|.. ..+|+.|++++| ++|+.|++++|++++. .+..++
T Consensus 303 ~~~---------------------------~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l---~l~~l~ 339 (457)
T 3bz5_A 303 DCQ---------------------------AAGITELDLSQN-------------PKLVYLYLNNTELTEL---DVSHNT 339 (457)
T ss_dssp ECT---------------------------TCCCSCCCCTTC-------------TTCCEEECTTCCCSCC---CCTTCT
T ss_pred ccC---------------------------CCcceEechhhc-------------ccCCEEECCCCccccc---ccccCC
Confidence 421 223333333333 4566666666666663 277788
Q ss_pred cCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCccccccccCcCcCC
Q 037197 499 SLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGA 568 (1009)
Q Consensus 499 ~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 568 (1009)
+|+.||+++|+|++ ++.|..|++++|+++|. ..+..|..+|+++|+++|.||..+..
T Consensus 340 ~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~~ 396 (457)
T 3bz5_A 340 KLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDLLD 396 (457)
T ss_dssp TCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTCBC
T ss_pred cCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhHhc
Confidence 88899999998885 35677788999999876 46678889999999999999987644
No 56
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=360.39 Aligned_cols=259 Identities=27% Similarity=0.444 Sum_probs=209.7
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEEe
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVYD 777 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~E 777 (1009)
++|+..+.||+|+||+||+|.+..+++.||+|++... +....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF--DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 4578889999999999999999999999999988442 34556677799999999999999999999999999999999
Q ss_pred ccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecccC
Q 037197 778 YMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLHK 857 (1009)
Q Consensus 778 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~ 857 (1009)
|+++|+|.++++.... .+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 88 ~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 88 YIKGGTLRGIIKSMDS---QYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp CCTTCBHHHHHHHCCT---TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred ecCCCcHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence 9999999999976432 378999999999999999999999 9999999999999999999999999999876433
Q ss_pred CCce--------------eeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHh
Q 037197 858 NETV--------------SMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIK 923 (1009)
Q Consensus 858 ~~~~--------------~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 923 (1009)
.... ....||+.|+|||++.+..++.++||||||+++|||++|..||...................
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD 241 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc
Confidence 2211 14578999999999999999999999999999999999999987533221111111111111
Q ss_pred hccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCC
Q 037197 924 SNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKP 980 (1009)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 980 (1009)
.. ..+ .++ ..+.+++.+|++.||++|||+.|+++.|+++..
T Consensus 242 ~~------~~~----~~~------~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 242 RY------CPP----NCP------PSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp HT------CCT----TCC------TTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cc------CCC----CCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 10 011 111 135678899999999999999999999998864
No 57
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=375.68 Aligned_cols=258 Identities=22% Similarity=0.243 Sum_probs=210.9
Q ss_pred HHHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEE
Q 037197 694 SEILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 694 ~~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 773 (1009)
..+.++|+..+.||+|+||.||+|.+..+++.||+|++..........+.+.+|++++++++||||+++++++.+++..+
T Consensus 7 ~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 86 (444)
T 3soa_A 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHY 86 (444)
T ss_dssp CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEE
T ss_pred ccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEE
Confidence 45778899999999999999999999999999999999766554555667779999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeC---CCCcEEEccccc
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLD---ANLEARIADFGL 850 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~---~~~~~kl~DfGl 850 (1009)
+||||+++|+|.+++..... +++..+..++.||++||+|||+. +|+||||||+||+++ .++.+||+|||+
T Consensus 87 lv~E~~~gg~L~~~i~~~~~----~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~ 159 (444)
T 3soa_A 87 LIFDLVTGGELFEDIVAREY----YSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGL 159 (444)
T ss_dssp EEECCCBCCBHHHHHHHCSC----CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSS
T ss_pred EEEEeCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCce
Confidence 99999999999999875432 78999999999999999999999 999999999999998 467899999999
Q ss_pred ceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccc
Q 037197 851 ARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDE 930 (1009)
Q Consensus 851 s~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1009)
+..............||+.|+|||++.+..++.++||||+||++|+|++|+.||... +....... +..+.. .
T Consensus 160 a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~-----~~~~~~~~-i~~~~~--~ 231 (444)
T 3soa_A 160 AIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDE-----DQHRLYQQ-IKAGAY--D 231 (444)
T ss_dssp CBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHH-HHHTCC--C
T ss_pred eEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCc-----cHHHHHHH-HHhCCC--C
Confidence 987755544555678999999999999889999999999999999999999999632 22222222 222211 1
Q ss_pred ccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 931 ALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
...+... ... .++.+++.+|++.||++|||+.|+++
T Consensus 232 ~~~~~~~----~~s---~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 232 FPSPEWD----TVT---PEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp CCTTTTT----TSC---HHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCccccc----cCC---HHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1111111 111 24567889999999999999999986
No 58
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.9e-40 Score=368.37 Aligned_cols=253 Identities=22% Similarity=0.343 Sum_probs=199.4
Q ss_pred HHHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEE
Q 037197 694 SEILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 694 ~~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 773 (1009)
.++.++|+..+.||+|+||.||+|.+..+++.||||++...... .....+.+|++++++++||||+++++++.+.+..+
T Consensus 6 ~~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~ 84 (347)
T 3zgw_A 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIF 84 (347)
T ss_dssp TTTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc-hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEE
Confidence 34567899999999999999999999999999999999665432 23456779999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
+||||+++|+|.+++..... +++.++..++.||+.||+|||+. +|+||||||+||++++++.+||+|||++..
T Consensus 85 lv~E~~~gg~L~~~l~~~~~----l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~ 157 (347)
T 3zgw_A 85 MVLEYCPGGELFDYIISQDR----LSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAK 157 (347)
T ss_dssp EEEECCTTCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCccc
Confidence 99999999999999965432 78999999999999999999999 999999999999999999999999999876
Q ss_pred cccCC-CceeeecccCcccCCcccCCCCC-CcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccc
Q 037197 854 MLHKN-ETVSMVAGSYGYIAPEYGYTLKV-DEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEA 931 (1009)
Q Consensus 854 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1009)
..... .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||.. .+..+...........
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~-----~~~~~~~~~i~~~~~~---- 228 (347)
T 3zgw_A 158 PKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD-----DNVMALYKKIMRGKYD---- 228 (347)
T ss_dssp --------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCC-----SSHHHHHHHHHHTCCC----
T ss_pred ccCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCC-----CCHHHHHHHHHcCCCC----
Confidence 54332 23445679999999999887775 8899999999999999999999973 2223333322222111
Q ss_pred cCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 932 LDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
+..... ..+..++.+|++.||++|||+.|+++
T Consensus 229 ----~p~~~s------~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 229 ----VPKWLS------PSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp ----CCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----CCCCCC------HHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 111111 23456889999999999999999986
No 59
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.9e-39 Score=365.11 Aligned_cols=256 Identities=23% Similarity=0.303 Sum_probs=207.8
Q ss_pred HHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCCh----hhHHHHHHHHHHHhccCCCceeeEEeEEEcCC
Q 037197 695 EILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDI----ESGDDLFREVSLLGRLRHRNIVRLLGYLHNET 770 (1009)
Q Consensus 695 ~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~ 770 (1009)
.+.+.|+..+.||+|+||.||+|.+..+|+.||+|++.+..... ...+.+.+|++++++++||||+++++++.+..
T Consensus 9 ~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 88 (361)
T 2yab_A 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT 88 (361)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC
Confidence 34567899999999999999999999999999999997653221 13466779999999999999999999999999
Q ss_pred eEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCC----cEEEc
Q 037197 771 NVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANL----EARIA 846 (1009)
Q Consensus 771 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~----~~kl~ 846 (1009)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+||+
T Consensus 89 ~~~lv~e~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~ 161 (361)
T 2yab_A 89 DVVLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLI 161 (361)
T ss_dssp EEEEEEECCCSCBHHHHHTTCS----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred EEEEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEE
Confidence 9999999999999999996543 389999999999999999999999 999999999999998877 79999
Q ss_pred ccccceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcc
Q 037197 847 DFGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNK 926 (1009)
Q Consensus 847 DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 926 (1009)
|||++...... .......||+.|+|||++....++.++||||+||++|+|++|..||... +..+..........
T Consensus 162 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~-----~~~~~~~~i~~~~~ 235 (361)
T 2yab_A 162 DFGLAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD-----TKQETLANITAVSY 235 (361)
T ss_dssp CCSSCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS-----SHHHHHHHHHTTCC
T ss_pred ecCCceEcCCC-CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhcCC
Confidence 99999876443 2334567999999999998889999999999999999999999999632 22222222221111
Q ss_pred ccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 927 AQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.+++...... ...+.+++.+|+..||++|||+.|+++
T Consensus 236 ----~~~~~~~~~~------s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 236 ----DFDEEFFSQT------SELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp ----CCCHHHHTTS------CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ----CCCchhccCC------CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1111111111 124567889999999999999999874
No 60
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.8e-39 Score=356.30 Aligned_cols=267 Identities=25% Similarity=0.380 Sum_probs=210.2
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC-ChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN-DIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
.++|+..+.||+|+||.||+|.+..+++.||+|++..... .....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 4578899999999999999999999999999999865433 334456677999999999999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
|||+++++|.+++.... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG----PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EeCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 99999999999996543 278999999999999999999999 99999999999999999999999999998664
Q ss_pred cCC-CceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCc
Q 037197 856 HKN-ETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDP 934 (1009)
Q Consensus 856 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1009)
... .......||+.|+|||...+..++.++||||+|+++|||++|+.||... ............... ....
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~-----~~~~~~~~~~~~~~~---~~~~ 234 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGE-----TAVSIAIKHIQDSVP---NVTT 234 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSS-----CHHHHHHHHHSSCCC---CHHH
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHhhccCC---Ccch
Confidence 333 2233457899999999998888999999999999999999999999732 222222222221110 0000
Q ss_pred cccccCchHHHHHHHHHHHHHHhccCCCCCCC-CHHHHHHHHhhcCCCccc
Q 037197 935 SIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRP-TMRDVITMLGEAKPRRKS 984 (1009)
Q Consensus 935 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RP-s~~evl~~L~~~~~~~~~ 984 (1009)
..... .. ..+.+++.+|++.||++|| ++.++.+.|+.+....+.
T Consensus 235 ~~~~~---~~---~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~ 279 (294)
T 4eqm_A 235 DVRKD---IP---QSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRA 279 (294)
T ss_dssp HSCTT---SC---HHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSST
T ss_pred hcccC---CC---HHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccC
Confidence 11111 11 2456788999999999998 999999999998766543
No 61
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-39 Score=360.10 Aligned_cols=252 Identities=19% Similarity=0.261 Sum_probs=206.8
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
.++|+..+.||+|+||.||+|.+..+++.||+|.+... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 80 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF 80 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEE
Confidence 46788999999999999999999999999999998543 334456679999999999999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCC--CCcEEEcccccceec
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDA--NLEARIADFGLARMM 854 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~--~~~~kl~DfGls~~~ 854 (1009)
||+++|+|.+++.... ..+++.+++.++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++..
T Consensus 81 e~~~g~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~ 154 (321)
T 1tki_A 81 EFISGLDIFERINTSA---FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154 (321)
T ss_dssp CCCCCCBHHHHHTSSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred EeCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence 9999999999996543 2378999999999999999999999 9999999999999987 789999999999876
Q ss_pred ccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCc
Q 037197 855 LHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDP 934 (1009)
Q Consensus 855 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1009)
.. ........||+.|+|||+..+..++.++||||+||++|+|++|+.||... ...+.+......... .+.
T Consensus 155 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~~~i~~~~~~----~~~ 224 (321)
T 1tki_A 155 KP-GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE-----TNQQIIENIMNAEYT----FDE 224 (321)
T ss_dssp CT-TCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHHTCCC----CCH
T ss_pred CC-CCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCC-----CHHHHHHHHHcCCCC----CCh
Confidence 43 33445567999999999998888899999999999999999999999732 222233222222111 111
Q ss_pred cccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 935 SIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 935 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
..... ...++.+++.+|++.||++|||+.|+++
T Consensus 225 ~~~~~------~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 225 EAFKE------ISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHHTT------SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhhcc------CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 10001 1224667889999999999999999987
No 62
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.2e-39 Score=361.28 Aligned_cols=250 Identities=21% Similarity=0.257 Sum_probs=205.4
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC-ChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN-DIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
+.|+..+.||+|+||.||+|+++.+++.||+|++.+... .......+.+|++++++++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 568889999999999999999999999999999864321 1223456779999999999999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 85 E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 157 (337)
T 1o6l_A 85 EYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157 (337)
T ss_dssp ECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence 9999999999986543 278889999999999999999999 999999999999999999999999999986544
Q ss_pred CCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCccc
Q 037197 857 KNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSI 936 (1009)
Q Consensus 857 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1009)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||... +............. .+
T Consensus 158 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-----~~~~~~~~i~~~~~--------~~ 224 (337)
T 1o6l_A 158 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----DHERLFELILMEEI--------RF 224 (337)
T ss_dssp TTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCC--------CC
T ss_pred CCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC-----CHHHHHHHHHcCCC--------CC
Confidence 444555678999999999999989999999999999999999999999632 22222222222111 11
Q ss_pred cccCchHHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 037197 937 AGQCKHVQEEMLLVLRIAVLCTAKLPKGRP-----TMRDVIT 973 (1009)
Q Consensus 937 ~~~~~~~~~~~~~l~~l~~~cl~~dp~~RP-----s~~evl~ 973 (1009)
..... .++..++.+|++.||++|| ++.|+++
T Consensus 225 p~~~s------~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 225 PRTLS------PEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp CTTSC------HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCCCC------HHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 11111 2456788899999999999 8988865
No 63
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.9e-39 Score=363.72 Aligned_cols=257 Identities=24% Similarity=0.310 Sum_probs=209.1
Q ss_pred HHHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEE
Q 037197 694 SEILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 694 ~~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 773 (1009)
..+.+.|+..+.||+|+||.||+|.+..+++.||+|++..........+.+.+|++++++++||||+++++++.+++..+
T Consensus 25 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 104 (362)
T 2bdw_A 25 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 104 (362)
T ss_dssp CHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 34567899999999999999999999999999999999766555555667779999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCC---cEEEccccc
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANL---EARIADFGL 850 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~---~~kl~DfGl 850 (1009)
+||||+++|+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+||+++.++ .+||+|||+
T Consensus 105 lv~e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~ 177 (362)
T 2bdw_A 105 LVFDLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGL 177 (362)
T ss_dssp EEECCCCSCBHHHHHTTCS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEEecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCc
Confidence 9999999999999987543 278999999999999999999999 999999999999998654 599999999
Q ss_pred ceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccc
Q 037197 851 ARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDE 930 (1009)
Q Consensus 851 s~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1009)
+...... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||... +..+.... +..+.. .
T Consensus 178 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~-----~~~~~~~~-i~~~~~--~ 248 (362)
T 2bdw_A 178 AIEVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE-----DQHRLYAQ-IKAGAY--D 248 (362)
T ss_dssp CBCCTTC-CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHH-HHHTCC--C
T ss_pred ceEecCC-cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCC-----CHHHHHHH-HHhCCC--C
Confidence 9876432 2334567999999999999889999999999999999999999999632 22222222 222210 0
Q ss_pred ccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 931 ALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
...+... .. ..++.+++.+|++.||++||++.|+++
T Consensus 249 ~~~~~~~----~~---~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 249 YPSPEWD----TV---TPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp CCTTGGG----GS---CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCccccc----CC---CHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1111111 11 124567889999999999999999875
No 64
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=5e-39 Score=358.08 Aligned_cols=257 Identities=24% Similarity=0.306 Sum_probs=208.2
Q ss_pred HHHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCCh----hhHHHHHHHHHHHhccCCCceeeEEeEEEcC
Q 037197 694 SEILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDI----ESGDDLFREVSLLGRLRHRNIVRLLGYLHNE 769 (1009)
Q Consensus 694 ~~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~ 769 (1009)
..+.+.|+..+.||+|+||.||+|.+..+++.||+|++....... ...+.+.+|++++++++||||+++++++.+.
T Consensus 7 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 86 (326)
T 2y0a_A 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK 86 (326)
T ss_dssp SCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred CCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence 345678999999999999999999999999999999987653221 2356677999999999999999999999999
Q ss_pred CeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCC----cEEE
Q 037197 770 TNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANL----EARI 845 (1009)
Q Consensus 770 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~----~~kl 845 (1009)
...++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++ .+||
T Consensus 87 ~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl 159 (326)
T 2y0a_A 87 TDVILILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKI 159 (326)
T ss_dssp SEEEEEEECCCSCBHHHHHTTSS----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEE
T ss_pred CEEEEEEEcCCCCCHHHHHHhcC----CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEE
Confidence 99999999999999999996543 288999999999999999999999 999999999999999887 8999
Q ss_pred cccccceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhc
Q 037197 846 ADFGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSN 925 (1009)
Q Consensus 846 ~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 925 (1009)
+|||+++..... .......||+.|+|||+.....++.++|||||||++|+|++|+.||... ...+.........
T Consensus 160 ~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~~~~~~~~ 233 (326)
T 2y0a_A 160 IDFGLAHKIDFG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD-----TKQETLANVSAVN 233 (326)
T ss_dssp CCCTTCEECCTT-SCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS-----SHHHHHHHHHHTC
T ss_pred EECCCCeECCCC-CccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC-----CHHHHHHHHHhcC
Confidence 999999876433 2334467999999999998889999999999999999999999999632 2222222221111
Q ss_pred cccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 926 KAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
. .......... ...+.+++.+|++.||++|||+.|+++
T Consensus 234 ~----~~~~~~~~~~------~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 234 Y----EFEDEYFSNT------SALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp C----CCCHHHHTTS------CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred C----CcCccccccC------CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1 0111111111 124567889999999999999999986
No 65
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.1e-39 Score=364.97 Aligned_cols=259 Identities=21% Similarity=0.279 Sum_probs=207.8
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCC---CChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeE
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSD---NDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNV 772 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 772 (1009)
+.+.|+..+.||+|+||.||+|.+..+++.||||++.... ......+.+.+|++++++++||||+++++++.+++..
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 4567999999999999999999999999999999985321 1112346677999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCc---EEEcccc
Q 037197 773 MMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLE---ARIADFG 849 (1009)
Q Consensus 773 ~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~---~kl~DfG 849 (1009)
++||||+++++|.+++.........+++..+..++.||++||+|||++ +|+||||||+||+++.++. +||+|||
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCc
Confidence 999999999999988865443344578999999999999999999999 9999999999999987654 9999999
Q ss_pred cceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccc
Q 037197 850 LARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQD 929 (1009)
Q Consensus 850 ls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (1009)
++..............||+.|+|||++.+..++.++|||||||++|||++|+.||... . ........ .+..
T Consensus 179 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~---~---~~~~~~i~-~~~~-- 249 (351)
T 3c0i_A 179 VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT---K---ERLFEGII-KGKY-- 249 (351)
T ss_dssp TCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS---H---HHHHHHHH-HTCC--
T ss_pred ceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc---H---HHHHHHHH-cCCC--
Confidence 9988755444445567999999999999888999999999999999999999999742 1 11122211 1110
Q ss_pred cccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 930 EALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
...+...... ...+.+++.+|++.||++||++.|+++
T Consensus 250 -~~~~~~~~~~------s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 250 -KMNPRQWSHI------SESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp -CCCHHHHTTS------CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -CCCccccccC------CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0111110111 124667889999999999999999975
No 66
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=5.8e-39 Score=355.20 Aligned_cols=266 Identities=23% Similarity=0.344 Sum_probs=202.8
Q ss_pred HHHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEE
Q 037197 694 SEILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 694 ~~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 773 (1009)
+.+.++|+..+.||+|+||+||+|++.. ++.||+|++............+.+|++++++++||||+++++++.++...+
T Consensus 17 q~l~~~y~~~~~lG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 95 (311)
T 3niz_A 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLT 95 (311)
T ss_dssp ECSSCEEEEEEEEEECSSCEEEEEEETT-SCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEE
T ss_pred cchHhhhHhhhhccCCCCeEEEEEEECC-CCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEE
Confidence 3356789999999999999999999965 899999999765444444567779999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
+||||+++ +|.+++..... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 96 lv~e~~~~-~l~~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 168 (311)
T 3niz_A 96 LVFEFMEK-DLKKVLDENKT---GLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARA 168 (311)
T ss_dssp EEEECCSE-EHHHHHHTCTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEcCCCC-CHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCcee
Confidence 99999974 78888765432 378889999999999999999999 999999999999999999999999999988
Q ss_pred cccCCCceeeecccCcccCCcccCC-CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccc--c
Q 037197 854 MLHKNETVSMVAGSYGYIAPEYGYT-LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQD--E 930 (1009)
Q Consensus 854 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--~ 930 (1009)
............+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...... +....+........... .
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~ 246 (311)
T 3niz_A 169 FGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD--DQLPKIFSILGTPNPREWPQ 246 (311)
T ss_dssp TTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT--THHHHHHHHHCCCCTTTSGG
T ss_pred cCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHHCCCChHHhhh
Confidence 7555455556678999999998765 56899999999999999999999999743322 22333332221111000 0
Q ss_pred -------------ccC-ccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Q 037197 931 -------------ALD-PSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVI 972 (1009)
Q Consensus 931 -------------~~~-~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl 972 (1009)
... ......... ...++.+++.+|++.||++|||++|++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~li~~~L~~dP~~Rpt~~ell 299 (311)
T 3niz_A 247 VQELPLWKQRTFQVFEKKPWSSIIPG---FCQEGIDLLSNMLCFDPNKRISARDAM 299 (311)
T ss_dssp GTTSHHHHSCCCCCCCCCCHHHHSTT---CCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred hhccchhhhcccccccCCcHHHhCcc---cCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence 000 000000000 113466889999999999999999987
No 67
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=7.4e-39 Score=346.69 Aligned_cols=258 Identities=25% Similarity=0.429 Sum_probs=207.5
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEEe
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVYD 777 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~E 777 (1009)
++|+..+.||+|+||.||+|.+.. +..||+|++.... ...+++.+|++++++++||||+++++++.++...++|||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKG-QYDVAVKMIKEGS---MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETT-TEEEEEEEECBTT---BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hheeeeeeeccCCCceEEEEEecC-ceeEEEEEeccCC---CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 568889999999999999998876 7789999996542 234567799999999999999999999999999999999
Q ss_pred ccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecccC
Q 037197 778 YMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLHK 857 (1009)
Q Consensus 778 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~ 857 (1009)
|+++++|.+++.... ..+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 84 YISNGCLLNYLRSHG---KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp CCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred ccCCCcHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 999999999996542 2378999999999999999999999 9999999999999999999999999999876443
Q ss_pred CC-ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccccccCcc
Q 037197 858 NE-TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPS 935 (1009)
Q Consensus 858 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1009)
.. ......+++.|+|||...+..++.++||||+|+++|||++ |+.||... .......... .+. ....+.
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-----~~~~~~~~~~-~~~---~~~~~~ 228 (268)
T 3sxs_A 158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLY-----TNSEVVLKVS-QGH---RLYRPH 228 (268)
T ss_dssp CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTS-----CHHHHHHHHH-TTC---CCCCCT
T ss_pred hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCcccc-----ChHHHHHHHH-cCC---CCCCCC
Confidence 32 2223345678999999988889999999999999999999 99999732 1222222221 111 111111
Q ss_pred ccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCcc
Q 037197 936 IAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRRK 983 (1009)
Q Consensus 936 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~~ 983 (1009)
. .+ ..+.+++.+|++.||++|||+.|+++.|+.+.++.+
T Consensus 229 ~---~~------~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~k 267 (268)
T 3sxs_A 229 L---AS------DTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKDK 267 (268)
T ss_dssp T---SC------HHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC---
T ss_pred c---Ch------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhccC
Confidence 1 11 246678899999999999999999999999987653
No 68
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.1e-38 Score=349.93 Aligned_cols=265 Identities=25% Similarity=0.343 Sum_probs=204.0
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEEe
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVYD 777 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~E 777 (1009)
++|+..+.||+|+||+||+|.+..+++.||+|++............+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46888999999999999999999999999999997766555556777899999999999999999999999999999999
Q ss_pred ccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecccC
Q 037197 778 YMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLHK 857 (1009)
Q Consensus 778 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~ 857 (1009)
|+++ ++.+.+.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~-~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN---GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CCSE-EHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred cCCC-CHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9976 5555554322 1278999999999999999999999 9999999999999999999999999999877555
Q ss_pred CCceeeecccCcccCCcccCCCC-CCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCccc
Q 037197 858 NETVSMVAGSYGYIAPEYGYTLK-VDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSI 936 (1009)
Q Consensus 858 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1009)
........+|+.|+|||+..+.. ++.++||||+||++|||++|..||.... +....................+..
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~ 230 (292)
T 3o0g_A 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN----DVDDQLKRIFRLLGTPTEEQWPSM 230 (292)
T ss_dssp CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS----SHHHHHHHHHHHHCCCCTTTCTTG
T ss_pred cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCC----CHHHHHHHHHHHhCCCChhhhhhh
Confidence 45555667899999999987665 7999999999999999999988864322 222222222211110000000000
Q ss_pred c---------------ccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 937 A---------------GQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 937 ~---------------~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
. ............+.+++.+|++.||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 231 TKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp GGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 000000011234567889999999999999999863
No 69
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=3e-39 Score=359.70 Aligned_cols=261 Identities=26% Similarity=0.408 Sum_probs=207.5
Q ss_pred HhcCCcCceeccCCceEEEEEEECCC---CeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRP---HMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 773 (1009)
.++|+..+.||+|+||.||+|.+..+ +..||||++.... .....+.+.+|++++++++||||+++++++.+++..+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 126 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM 126 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence 45688899999999999999999754 4569999996432 3444567779999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
+||||+++|+|.++++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 127 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 127 IVTEYMENGSLDTFLRTHDG---QFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp EEEECCTTCBHHHHHHTTTT---CSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEeeCCCCCcHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 99999999999999965432 278999999999999999999999 999999999999999999999999999987
Q ss_pred cccCCCc---eeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccc
Q 037197 854 MLHKNET---VSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQD 929 (1009)
Q Consensus 854 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (1009)
....... .....+|+.|+|||++....++.++||||||+++|||++ |+.||... ........ +..+.
T Consensus 201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~-----~~~~~~~~-~~~~~--- 271 (325)
T 3kul_A 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM-----TNRDVISS-VEEGY--- 271 (325)
T ss_dssp CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTS-----CHHHHHHH-HHTTC---
T ss_pred cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccC-----CHHHHHHH-HHcCC---
Confidence 6443321 222345778999999988889999999999999999999 99999632 11222222 22111
Q ss_pred cccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 930 EALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
.......+. ..+.+++.+||+.||++||++.|+++.|+.+....
T Consensus 272 ---~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 272 ---RLPAPMGCP------HALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp ---CCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred ---CCCCCCCcC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 111111111 24667889999999999999999999999986543
No 70
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1e-38 Score=354.65 Aligned_cols=249 Identities=22% Similarity=0.338 Sum_probs=204.4
Q ss_pred cCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEEec
Q 037197 699 CVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVYDY 778 (1009)
Q Consensus 699 ~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~E~ 778 (1009)
.|+..+.||+|+||.||+|.+..+|+.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 123 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEF 123 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--CCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEec
Confidence 3666778999999999999999889999999986543 23356677999999999999999999999999999999999
Q ss_pred cCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecccCC
Q 037197 779 MPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLHKN 858 (1009)
Q Consensus 779 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~~ 858 (1009)
+++++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 124 ~~~~~L~~~l~~~-----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 195 (321)
T 2c30_A 124 LQGGALTDIVSQV-----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV 195 (321)
T ss_dssp CCSCBHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred CCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEeeeeeeeecccCc
Confidence 9999999998653 278999999999999999999998 99999999999999999999999999998775544
Q ss_pred CceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCccccc
Q 037197 859 ETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSIAG 938 (1009)
Q Consensus 859 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (1009)
.......||+.|+|||+..+..++.++||||||+++|||++|+.||... .....+... .... .+.+..
T Consensus 196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~-----~~~~~~~~~-~~~~------~~~~~~ 263 (321)
T 2c30_A 196 PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD-----SPVQAMKRL-RDSP------PPKLKN 263 (321)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHHHHH-HHSS------CCCCTT
T ss_pred cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHH-hcCC------CCCcCc
Confidence 4445667999999999999889999999999999999999999999632 222222222 1111 111110
Q ss_pred cCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 939 QCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 939 ~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.... ...+.+++.+|++.||++|||+.|+++
T Consensus 264 -~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 264 -SHKV---SPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp -GGGS---CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -cccC---CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0011 124567888999999999999999986
No 71
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.4e-39 Score=360.33 Aligned_cols=267 Identities=26% Similarity=0.327 Sum_probs=206.2
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCC----eEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNET----NVM 773 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~----~~~ 773 (1009)
++|+..+.||+|+||.||+|++. ++.||||++... ........+|+.++++++||||+++++++.+.. ..+
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred hhchhhheecccCceEEEEEEEC--CCEEEEEEeecC---chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 56889999999999999999886 689999998543 233444557899999999999999999998754 479
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhc-------CCCCeEEeccCCCcEEeCCCCcEEEc
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHD-------CQPPVIHRDIKSNNILLDANLEARIA 846 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~-------~~~~ivH~dlk~~NIll~~~~~~kl~ 846 (1009)
+||||+++|+|.++++... +++..++.++.|+++||+|||+. +.++|+||||||+||+++.++.+||+
T Consensus 99 lv~e~~~~g~L~~~l~~~~-----~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~ 173 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKANV-----VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173 (322)
T ss_dssp EEEECCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEecCCCCCHHHHHHhcC-----CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence 9999999999999996543 78999999999999999999975 23489999999999999999999999
Q ss_pred ccccceecccCCC--ceeeecccCcccCCcccCC-----CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCc-------
Q 037197 847 DFGLARMMLHKNE--TVSMVAGSYGYIAPEYGYT-----LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSK------- 912 (1009)
Q Consensus 847 DfGls~~~~~~~~--~~~~~~gt~~y~aPE~~~~-----~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~------- 912 (1009)
|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........
T Consensus 174 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 253 (322)
T 3soc_A 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI 253 (322)
T ss_dssp CCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH
T ss_pred cCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh
Confidence 9999987654332 2233578999999998775 3566789999999999999999999975332211
Q ss_pred ----cHHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCC
Q 037197 913 ----DIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPR 981 (1009)
Q Consensus 913 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~ 981 (1009)
....+. ..... ....+.+..... ......++.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 254 ~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 254 GQHPSLEDMQ-EVVVH-----KKKRPVLRDYWQ-KHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp CSSCCHHHHH-HHHTT-----SCCCCCCCGGGG-SSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccCCchhhhh-hhhhc-----ccCCCCcccccc-ccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 111111 11111 111222221111 112344578899999999999999999999999988643
No 72
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.7e-39 Score=352.78 Aligned_cols=252 Identities=24% Similarity=0.329 Sum_probs=197.8
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCCh------------------------hhHHHHHHHHHHHh
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDI------------------------ESGDDLFREVSLLG 752 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~------------------------~~~~~~~~E~~~l~ 752 (1009)
.++|+..+.||+|+||.||+|.+..+++.||||++....... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 356888999999999999999999999999999986543211 12356779999999
Q ss_pred ccCCCceeeEEeEEEc--CCeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEecc
Q 037197 753 RLRHRNIVRLLGYLHN--ETNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDI 830 (1009)
Q Consensus 753 ~l~Hpniv~l~~~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dl 830 (1009)
+++||||+++++++.+ ....++||||+++++|.+++... .+++.+++.++.|+++||+|||+. +|+||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl 163 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK-----PLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDI 163 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence 9999999999999986 56899999999999998876432 378999999999999999999999 9999999
Q ss_pred CCCcEEeCCCCcEEEcccccceecccCCCceeeecccCcccCCcccCCCC---CCcccchHhHHHHHHHHHhCCCCCCCC
Q 037197 831 KSNNILLDANLEARIADFGLARMMLHKNETVSMVAGSYGYIAPEYGYTLK---VDEKSDIYSFGVVLLELLTGKMPLDPA 907 (1009)
Q Consensus 831 k~~NIll~~~~~~kl~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDv~SlGvvl~elltg~~Pf~~~ 907 (1009)
||+||+++.++.+||+|||+++.............||+.|+|||...+.. ++.++||||||+++|||++|+.||...
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 243 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE 243 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc
Confidence 99999999999999999999988755544455667999999999987654 378899999999999999999999732
Q ss_pred CCCCccHHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 908 FGGSKDIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
....... .+..... . .+.. ... . ..+.+++.+|++.||++||++.|+++
T Consensus 244 -----~~~~~~~-~~~~~~~--~--~~~~-~~~---~---~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 244 -----RIMCLHS-KIKSQAL--E--FPDQ-PDI---A---EDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp -----SHHHHHH-HHHHCCC--C--CCSS-SCC---C---HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -----cHHHHHH-HHhcccC--C--CCCc-ccc---C---HHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 2222222 2222110 0 0110 011 1 24567889999999999999999863
No 73
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=4.4e-39 Score=365.24 Aligned_cols=252 Identities=22% Similarity=0.322 Sum_probs=202.5
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC-ChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCCeEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN-DIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNETNVMM 774 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~l 774 (1009)
.+.|+..+.||+|+||.||+|+++.+++.||+|++++... .......+.+|..+++++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 3568899999999999999999999999999999976432 223344567899999887 89999999999999999999
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceec
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMM 854 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~ 854 (1009)
||||+++|+|.+++..... +++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 131 V~E~~~gg~L~~~l~~~~~----l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQRK----LPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEECCTTCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEcCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 9999999999999875432 78999999999999999999999 9999999999999999999999999999865
Q ss_pred ccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCC---CccHHHHHHHHHhhccccccc
Q 037197 855 LHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGG---SKDIVEWVLSMIKSNKAQDEA 931 (1009)
Q Consensus 855 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 931 (1009)
...........||+.|+|||++.+..++.++|||||||++|||++|+.||...... .......+...+.....
T Consensus 204 ~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~---- 279 (396)
T 4dc2_A 204 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI---- 279 (396)
T ss_dssp CCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC----
T ss_pred ccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc----
Confidence 44455556678999999999999999999999999999999999999999643211 11122223333222211
Q ss_pred cCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCH
Q 037197 932 LDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTM 968 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~ 968 (1009)
.+..... .++..++.+|++.||++||++
T Consensus 280 ---~~p~~~s------~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 280 ---RIPRSLS------VKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ---CCCTTSC------HHHHHHHHHHTCSCTTTSTTC
T ss_pred ---CCCCcCC------HHHHHHHHHHhcCCHhHcCCC
Confidence 1111111 245678899999999999996
No 74
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=4.3e-39 Score=364.75 Aligned_cols=261 Identities=25% Similarity=0.393 Sum_probs=209.6
Q ss_pred hcCCcCceeccCCceEEEEEEEC-------CCCeEEEEEEcccCCCChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcC
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFH-------RPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNE 769 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~-------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~ 769 (1009)
++|+..+.||+|+||.||+|.+. .++..||||+++.. ......+.+.+|+++++++ +||||+++++++.+.
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT-CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC-cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 56888999999999999999864 34678999999654 2344456778999999999 899999999999999
Q ss_pred CeEEEEEeccCCCChhhhhcCCccc------------cccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEe
Q 037197 770 TNVMMVYDYMPNDSLGEALHGKEAG------------KLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILL 837 (1009)
Q Consensus 770 ~~~~lV~E~~~~gsL~~~l~~~~~~------------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll 837 (1009)
+..++||||+++|+|.++++..... ...+++.+++.++.||++||+|||++ +|+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 9999999999999999999764321 12378899999999999999999999 99999999999999
Q ss_pred CCCCcEEEcccccceecccCCC--ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccH
Q 037197 838 DANLEARIADFGLARMMLHKNE--TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDI 914 (1009)
Q Consensus 838 ~~~~~~kl~DfGls~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~ 914 (1009)
+.++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.... ...+
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~--~~~~ 314 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--VEEL 314 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC--HHHH
Confidence 9999999999999987644332 2223456789999999988899999999999999999999 999997432 1222
Q ss_pred HHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCC
Q 037197 915 VEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKP 980 (1009)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 980 (1009)
.. .+..+. .+.....+. ..+.+++.+||+.||++||++.|+++.|+++..
T Consensus 315 ~~----~~~~~~------~~~~~~~~~------~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 315 FK----LLKEGH------RMDKPANCT------NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp HH----HHHTTC------CCCCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HH----HHhcCC------CCCCCCCCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 22 122221 111111121 246678899999999999999999999998753
No 75
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.2e-39 Score=370.69 Aligned_cols=260 Identities=22% Similarity=0.325 Sum_probs=208.6
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEEe
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVYD 777 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~E 777 (1009)
+.|+..+.||+|+||.||+|.+..+++.||||+++.. ......+++.+|++++++++||||+++++++.+++..++|||
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT-SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 4678889999999999999999988999999998643 233444566799999999999999999999999999999999
Q ss_pred ccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecccC
Q 037197 778 YMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLHK 857 (1009)
Q Consensus 778 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~ 857 (1009)
|+++|+|.++++... ..+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 193 ~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~ 266 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266 (377)
T ss_dssp CCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred cCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence 999999999997532 2378899999999999999999999 9999999999999999999999999999865332
Q ss_pred CCce--eeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccccccCc
Q 037197 858 NETV--SMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDP 934 (1009)
Q Consensus 858 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1009)
.... ....+++.|+|||.+....++.++|||||||++|||++ |+.||.... . ..+...+..+.. .
T Consensus 267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~-----~-~~~~~~~~~~~~------~ 334 (377)
T 3cbl_A 267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS-----N-QQTREFVEKGGR------L 334 (377)
T ss_dssp EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC-----H-HHHHHHHHTTCC------C
T ss_pred ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----H-HHHHHHHHcCCC------C
Confidence 1111 11235678999999888889999999999999999998 999997421 1 112222222211 1
Q ss_pred cccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 935 SIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 935 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
.....++ ..+.+++.+||+.||++|||+.++++.|+++.++.
T Consensus 335 ~~~~~~~------~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 335 PCPELCP------DAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp CCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CCCCCCC------HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 1111121 24567889999999999999999999999986543
No 76
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.4e-38 Score=350.00 Aligned_cols=276 Identities=34% Similarity=0.530 Sum_probs=215.8
Q ss_pred HHHHhcCCcC------ceeccCCceEEEEEEECCCCeEEEEEEcccCC--CChhhHHHHHHHHHHHhccCCCceeeEEeE
Q 037197 694 SEILACVKES------NIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSD--NDIESGDDLFREVSLLGRLRHRNIVRLLGY 765 (1009)
Q Consensus 694 ~~~~~~~~~~------~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~ 765 (1009)
..+++.|... +.||+|+||.||+|.+. ++.||||++.... ......+.+.+|++++++++||||++++++
T Consensus 21 ~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 98 (307)
T 2nru_A 21 KNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 98 (307)
T ss_dssp HHHTTTTCCSBTTTTCCEEEECSSEEEEEEESS--SCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred HHHHcccccccccccCCccccCCCeEEEEEEEC--CceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEE
Confidence 4455556555 89999999999999873 6889999986542 223345667799999999999999999999
Q ss_pred EEcCCeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEE
Q 037197 766 LHNETNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARI 845 (1009)
Q Consensus 766 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl 845 (1009)
+.+.+..++||||+++++|.+++..... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||
T Consensus 99 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl 174 (307)
T 2nru_A 99 SSDGDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKI 174 (307)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHTGGG-CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEE
T ss_pred EecCCceEEEEEecCCCcHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcCCCcEEE
Confidence 9999999999999999999999975432 23489999999999999999999999 9999999999999999999999
Q ss_pred cccccceecccCCCc--eeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHh
Q 037197 846 ADFGLARMMLHKNET--VSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIK 923 (1009)
Q Consensus 846 ~DfGls~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 923 (1009)
+|||++......... .....||+.|+|||...+ .++.++||||||+++|+|++|+.||...... .....+......
T Consensus 175 ~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~ 252 (307)
T 2nru_A 175 SDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDIKEEIED 252 (307)
T ss_dssp CCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS-SBTTHHHHHHHT
T ss_pred eecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch-HHHHHHHHHhhh
Confidence 999999876443322 233568999999998764 5889999999999999999999999754322 222333333222
Q ss_pred hccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCC
Q 037197 924 SNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKP 980 (1009)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 980 (1009)
.........++.+.... ......+.+++.+|++.||++||++.|+++.|+++..
T Consensus 253 ~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 253 EEKTIEDYIDKKMNDAD---STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp TSCCHHHHSCSSCSCCC---HHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred hhhhhhhhccccccccc---hHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 22223333444333222 2334567789999999999999999999999998763
No 77
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=351.67 Aligned_cols=278 Identities=20% Similarity=0.289 Sum_probs=214.8
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCC--eEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNET--NVMM 774 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~--~~~l 774 (1009)
.++|+..+.||+|+||.||+|.+..+++.||||++..... ....+.+.+|++++++++||||+++++++.... ..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 3568889999999999999999999999999999864322 233466679999999999999999999988665 7899
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEe----CCCCcEEEccccc
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILL----DANLEARIADFGL 850 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll----~~~~~~kl~DfGl 850 (1009)
||||+++++|.+++..... ...+++.+++.++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 87 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp EEECCTTCBHHHHHHSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred EEeCCCCCCHHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 9999999999999976543 22378999999999999999999999 99999999999999 7888899999999
Q ss_pred ceecccCCCceeeecccCcccCCcccC--------CCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHH
Q 037197 851 ARMMLHKNETVSMVAGSYGYIAPEYGY--------TLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMI 922 (1009)
Q Consensus 851 s~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 922 (1009)
++...... ......||+.|+|||++. ...++.++|||||||++|||++|+.||...... ....+.+....
T Consensus 163 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~ 240 (319)
T 4euu_A 163 ARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP-RRNKEVMYKII 240 (319)
T ss_dssp CEECCTTC-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCG-GGCHHHHHHHH
T ss_pred ceecCCCC-ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc-chhHHHHHHHh
Confidence 98764433 333456999999999865 567899999999999999999999999754332 22233333333
Q ss_pred hhccccccc------------cCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 923 KSNKAQDEA------------LDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 923 ~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
.... .... ..+.+...+.........+..++.+|++.||++|||++|+++...+....+
T Consensus 241 ~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~~ 311 (319)
T 4euu_A 241 TGKP-SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRG 311 (319)
T ss_dssp HHCC-TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC--
T ss_pred cCCC-cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhcC
Confidence 2211 0000 001111111222334455778999999999999999999999998876543
No 78
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2e-38 Score=360.11 Aligned_cols=255 Identities=19% Similarity=0.284 Sum_probs=207.2
Q ss_pred HHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEE
Q 037197 695 EILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMM 774 (1009)
Q Consensus 695 ~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 774 (1009)
.+.+.|+..+.||+|+||.||+|.+..+++.||+|++.... ......+.+|++++++++||||+++++++.+....++
T Consensus 48 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 125 (387)
T 1kob_A 48 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 125 (387)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEE
T ss_pred ccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEE
Confidence 34678999999999999999999999999999999985432 3334567799999999999999999999999999999
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCC--CCcEEEcccccce
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDA--NLEARIADFGLAR 852 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~--~~~~kl~DfGls~ 852 (1009)
||||+++|+|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||+++
T Consensus 126 v~E~~~gg~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~ 199 (387)
T 1kob_A 126 ILEFLSGGELFDRIAAED---YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLAT 199 (387)
T ss_dssp EEECCCCCBHHHHTTCTT---CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCE
T ss_pred EEEcCCCCcHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccce
Confidence 999999999999997543 2378999999999999999999999 9999999999999974 4689999999998
Q ss_pred ecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccccc
Q 037197 853 MMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEAL 932 (1009)
Q Consensus 853 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1009)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||... +..+.+......... .
T Consensus 200 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~-----~~~~~~~~i~~~~~~----~ 269 (387)
T 1kob_A 200 KLNPD-EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE-----DDLETLQNVKRCDWE----F 269 (387)
T ss_dssp ECCTT-SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS-----SHHHHHHHHHHCCCC----C
T ss_pred ecCCC-cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCC----C
Confidence 76433 3344567999999999999888999999999999999999999999732 222222222222111 1
Q ss_pred CccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 933 DPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 933 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
++...... . .++.+++.+|++.||++|||+.|+++
T Consensus 270 ~~~~~~~~---s---~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 270 DEDAFSSV---S---PEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp CSSTTTTS---C---HHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CccccccC---C---HHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 11111111 1 24567889999999999999999987
No 79
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=3.4e-38 Score=369.80 Aligned_cols=345 Identities=28% Similarity=0.368 Sum_probs=180.6
Q ss_pred ccccceeeeccccccccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEeccCccccccCcccCCCCCCcEEE
Q 037197 185 LQKLKFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIPPALGRLKKLTTVY 264 (1009)
Q Consensus 185 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 264 (1009)
+++|+.|++++|.++ .+| .+..+++|++|+|++|.+++..+ ++++++|++|++++|.+++..+ ++++++|++|+
T Consensus 45 l~~l~~L~l~~~~i~-~l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 45 LDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHTCCEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred hccccEEecCCCCCc-cCc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 344444444444444 222 24444444444444444443322 4455555555555555543332 45555555555
Q ss_pred cccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCc
Q 037197 265 LYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIG 344 (1009)
Q Consensus 265 L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 344 (1009)
+++|.+++. +. +..+++|++|++++|.+++ ++ .+..+++|++|+++ |.+.+.. .+.++++|+.|++++|.+.+
T Consensus 119 L~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~ 191 (466)
T 1o6v_A 119 LFNNQITDI-DP-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSD 191 (466)
T ss_dssp CCSSCCCCC-GG-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCC-hH-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCC
Confidence 555555532 21 4555555555555555553 22 25555555555554 3333321 24555555555555555443
Q ss_pred cCCccccCCCCCceeeccCccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCccccccCCccCC
Q 037197 345 SLPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGN 424 (1009)
Q Consensus 345 ~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~ 424 (1009)
. ..+..+++|+.|++++|.+++..| +..+++|+.|++++|++++. .. +..
T Consensus 192 ~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~------------------------l~~ 241 (466)
T 1o6v_A 192 I--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GT------------------------LAS 241 (466)
T ss_dssp C--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GG------------------------GGG
T ss_pred C--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hh------------------------hhc
Confidence 2 123344444444444444443322 33334444444444444321 12 334
Q ss_pred CCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEE
Q 037197 425 LPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLD 504 (1009)
Q Consensus 425 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~Ld 504 (1009)
+++|+.|++++|++++..| +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|+
T Consensus 242 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 315 (466)
T 1o6v_A 242 LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLT 315 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEE
T ss_pred CCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEE
Confidence 4444444444444443322 4444455555555555544332 4455555555555555554333 56667777777
Q ss_pred eecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCccccccccCcCcCCCCCCcEEecCCCcccc
Q 037197 505 LSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEG 584 (1009)
Q Consensus 505 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g 584 (1009)
|++|++++..| +..+++|+.|++++|++++. ..+..+++|+.|++++|++++.+| +..++.|+.|++++|++++
T Consensus 316 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 316 LYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred CcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 77777776555 56777777777777777754 456777777777777777777766 6777777777777777776
No 80
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.2e-38 Score=356.92 Aligned_cols=251 Identities=22% Similarity=0.316 Sum_probs=202.9
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC-ChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCCeEEEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN-DIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~lV 775 (1009)
+.|+..+.||+|+||.||+|+++.+++.||+|++.+... .......+.+|+.+++++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 468889999999999999999999999999999976532 333455667899999988 899999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp ECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 99999999999996543 278899999999999999999999 99999999999999999999999999998654
Q ss_pred cCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCC---ccHHHHHHHHHhhcccccccc
Q 037197 856 HKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGS---KDIVEWVLSMIKSNKAQDEAL 932 (1009)
Q Consensus 856 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 932 (1009)
..........||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......+...+.....
T Consensus 162 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~----- 236 (345)
T 3a8x_A 162 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI----- 236 (345)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC-----
T ss_pred CCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC-----
Confidence 44445556789999999999998899999999999999999999999997432111 1112222222222211
Q ss_pred CccccccCchHHHHHHHHHHHHHHhccCCCCCCCCH
Q 037197 933 DPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTM 968 (1009)
Q Consensus 933 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~ 968 (1009)
.+..... ..+..++.+|++.||++||++
T Consensus 237 --~~p~~~s------~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 237 --RIPRSLS------VKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp --CCCTTSC------HHHHHHHHHHTCSSTTTSTTC
T ss_pred --CCCCCCC------HHHHHHHHHHhcCCHhHCCCC
Confidence 1111111 245678899999999999996
No 81
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=363.90 Aligned_cols=251 Identities=21% Similarity=0.281 Sum_probs=199.0
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC-ChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCCeEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN-DIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNETNVMM 774 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~l 774 (1009)
.++|+..+.||+|+||.||+|+++.+++.||||++.+... .........+|.++++.+ +||||+++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 4578899999999999999999999999999999864321 122345566899999988 79999999999999999999
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceec
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMM 854 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~ 854 (1009)
||||+++|+|.+++..... +++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 102 v~E~~~gg~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSRR----FDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEECCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEeCCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 9999999999999975432 78999999999999999999999 9999999999999999999999999999865
Q ss_pred ccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCc
Q 037197 855 LHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDP 934 (1009)
Q Consensus 855 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1009)
...........||+.|+|||++.+..++.++||||+||++|||++|+.||... +..+..........
T Consensus 175 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~-----~~~~~~~~i~~~~~-------- 241 (353)
T 3txo_A 175 ICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE-----NEDDLFEAILNDEV-------- 241 (353)
T ss_dssp CC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCC--------
T ss_pred ccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCC--------
Confidence 44444555678999999999998888999999999999999999999999732 22222222222111
Q ss_pred cccccCchHHHHHHHHHHHHHHhccCCCCCCCCH------HHHHH
Q 037197 935 SIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTM------RDVIT 973 (1009)
Q Consensus 935 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~------~evl~ 973 (1009)
.+..... ..+..++.+|++.||++||++ .|+++
T Consensus 242 ~~p~~~~------~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 242 VYPTWLH------EDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp CCCTTSC------HHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CCCCCCC------HHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1111111 235678899999999999998 66654
No 82
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=5.5e-39 Score=364.07 Aligned_cols=261 Identities=25% Similarity=0.421 Sum_probs=198.6
Q ss_pred HhcCCcCceeccCCceEEEEEEEC---CCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFH---RPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 773 (1009)
..+|+..+.||+|+||.||+|++. .++..||||+++... .....+.+.+|++++++++||||+++++++.+++..+
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence 357899999999999999999886 457789999996542 3445567789999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
+||||+++|+|.++++.... .+++.+++.++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 123 lv~e~~~~~sL~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEECCTTCBHHHHHHTTTT---CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEeCCCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 99999999999999976432 378999999999999999999999 999999999999999999999999999987
Q ss_pred cccCCCc---eeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccc
Q 037197 854 MLHKNET---VSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQD 929 (1009)
Q Consensus 854 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (1009)
....... .....+++.|+|||++....++.++||||||+++|||++ |+.||.... ..+.. ..+..+..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~-----~~~~~-~~i~~~~~-- 268 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-----NQDVI-KAVDEGYR-- 268 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC-----HHHHH-HHHHTTEE--
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC-----HHHHH-HHHHcCCC--
Confidence 6443221 122335678999999988899999999999999999998 999996321 11222 22222211
Q ss_pred cccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 930 EALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
......+ ...+.+++.+|++.||++||++.|+++.|+.+....
T Consensus 269 ----~~~~~~~------~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 269 ----LPPPMDC------PAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp ----CCCCTTC------BHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred ----CCCCccc------cHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 0001111 124667899999999999999999999999886543
No 83
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.1e-38 Score=354.77 Aligned_cols=254 Identities=24% Similarity=0.353 Sum_probs=202.8
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
.++|+..+.||+|+||.||+|.+..+++.||||++..... ....+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 4678999999999999999999999999999999864422 222355679999999999999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
||+++|+|.+++..... +++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 85 e~~~~~~L~~~l~~~~~----~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 157 (323)
T 3tki_A 85 EYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (323)
T ss_dssp ECCTTEEGGGGSBTTTB----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EcCCCCcHHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence 99999999999975533 78999999999999999999998 999999999999999999999999999987643
Q ss_pred CC--CceeeecccCcccCCcccCCCCC-CcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccC
Q 037197 857 KN--ETVSMVAGSYGYIAPEYGYTLKV-DEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALD 933 (1009)
Q Consensus 857 ~~--~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (1009)
.. .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||............+. .... ...
T Consensus 158 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~----~~~~----~~~ 229 (323)
T 3tki_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK----EKKT----YLN 229 (323)
T ss_dssp TTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHH----TTCT----TST
T ss_pred CCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh----cccc----cCC
Confidence 32 22345679999999999877665 7899999999999999999999975433322222221 1110 011
Q ss_pred ccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 037197 934 PSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITM 974 (1009)
Q Consensus 934 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 974 (1009)
.. ... ...+.+++.+|++.||++|||+.|+++.
T Consensus 230 -~~----~~~---~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 230 -PW----KKI---DSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp -TG----GGS---CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -cc----ccC---CHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 01 111 1235578899999999999999999864
No 84
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=9.7e-39 Score=349.60 Aligned_cols=263 Identities=24% Similarity=0.344 Sum_probs=197.0
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEEe
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVYD 777 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~E 777 (1009)
++|+..+.||+|+||.||+|.+ .+++.||+|++............+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence 4688889999999999999998 458899999996654434445667799999999999999999999999999999999
Q ss_pred ccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecccC
Q 037197 778 YMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLHK 857 (1009)
Q Consensus 778 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~ 857 (1009)
|+++ +|.+++..... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~~~-~l~~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (288)
T 1ob3_A 81 HLDQ-DLKKLLDVCEG---GLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (288)
T ss_dssp CCSE-EHHHHHHTSTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred ecCC-CHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence 9975 89998875432 278889999999999999999999 9999999999999999999999999999876444
Q ss_pred CCceeeecccCcccCCcccCC-CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccc-------cc
Q 037197 858 NETVSMVAGSYGYIAPEYGYT-LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKA-------QD 929 (1009)
Q Consensus 858 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~-------~~ 929 (1009)
........+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.... ..+....+......... ..
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T 1ob3_A 154 VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS--EADQLMRIFRILGTPNSKNWPNVTEL 231 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHHCCCChhhchhhhcc
Confidence 444445678999999998865 458999999999999999999999997421 11111111111110000 00
Q ss_pred cccCcccc--------ccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 930 EALDPSIA--------GQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 930 ~~~~~~~~--------~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
...++.+. ...... ..++.+++.+|++.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 232 PKYDPNFTVYEPLPWESFLKGL---DESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TTCCTTCCCCCCCCGGGTCCSC---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccccCccHHHHhhhc---CHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00111110 000111 124567889999999999999999874
No 85
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=8.6e-38 Score=366.34 Aligned_cols=348 Identities=28% Similarity=0.394 Sum_probs=258.1
Q ss_pred ccCCCCCeEecccCcccccCCccccccCccCcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCe
Q 037197 87 RGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLES 166 (1009)
Q Consensus 87 ~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~ 166 (1009)
..+++|++|+++++.+.. +| .+..+++|++|+|++|.+.+..| ++++++|++|++++|.+++..+ ++++++|++
T Consensus 43 ~~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 116 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTG 116 (466)
T ss_dssp HHHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred hHhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCE
Confidence 346677888888887754 44 47778888888888888776543 7888888888888888875544 788888888
Q ss_pred eeccCCccCCcCCccccCccccceeeeccccccccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEeccCcc
Q 037197 167 LDFRGSFFEGSVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSL 246 (1009)
Q Consensus 167 L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 246 (1009)
|++++|.+++..+ +.++++|++|++++|.+++ ++ .++.+++|++|+++ |.+.+.. .++++++|++|++++|.+
T Consensus 117 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l 189 (466)
T 1o6v_A 117 LTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKV 189 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcC
Confidence 8888888875433 7788888888888888874 33 47778888888885 4554333 377888888888888887
Q ss_pred ccccCcccCCCCCCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCC
Q 037197 247 SGQIPPALGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKL 326 (1009)
Q Consensus 247 ~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l 326 (1009)
++. ..+..+++|++|++++|.+++..| ++.+++|++|++++|++++. ..+..+++|++|++++|++++..+ +
T Consensus 190 ~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~ 261 (466)
T 1o6v_A 190 SDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--L 261 (466)
T ss_dssp CCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--G
T ss_pred CCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--h
Confidence 654 347778888888888888876544 66778888888888888743 357778888888888888876644 7
Q ss_pred CCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccCCcCccCCCCCceeecccccccccCCcccccCccccE
Q 037197 327 GELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVR 406 (1009)
Q Consensus 327 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~ 406 (1009)
..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..| +..+++|++
T Consensus 262 ~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~ 335 (466)
T 1o6v_A 262 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQR 335 (466)
T ss_dssp TTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCE
T ss_pred hcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCE
Confidence 778888888888888776544 6777778888888888775443 6677778888888888776655 667778888
Q ss_pred EEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCccccc
Q 037197 407 VRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESY 465 (1009)
Q Consensus 407 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 465 (1009)
|++++|++++. ..+.++++|+.|++++|++++..| +..+++|+.|++++|.+++.
T Consensus 336 L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 336 LFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp EECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECC
T ss_pred eECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccCC
Confidence 88888877754 357777788888888888876666 67777788888888877763
No 86
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.2e-38 Score=347.45 Aligned_cols=262 Identities=32% Similarity=0.477 Sum_probs=203.5
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
.++|+..+.||+|+||.||+|.+.. .+|+|+++.........+.+.+|++++++++||||+++++++.. +..++||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~---~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~ 110 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECC---EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEE
Confidence 3568889999999999999998764 58899887655556666778899999999999999999998764 4578999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
||+++++|.+++..... .+++.+++.|+.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 111 e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQET---KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp ECCSSCBHHHHHHTSCC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred ecCCCCcHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 99999999999975432 378999999999999999999999 999999999999999999999999999976532
Q ss_pred CC--CceeeecccCcccCCcccC---CCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccc
Q 037197 857 KN--ETVSMVAGSYGYIAPEYGY---TLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEA 931 (1009)
Q Consensus 857 ~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1009)
.. .......||+.|+|||++. ...++.++||||||+++|||++|+.||..... ...+......+.
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~-----~~~~~~~~~~~~----- 254 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN-----RDQIIFMVGRGY----- 254 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-----HHHHHHHHHHTC-----
T ss_pred ccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCc-----HHHHHHHHhcCC-----
Confidence 22 2334567999999999875 56688999999999999999999999974322 112222222221
Q ss_pred cCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCC
Q 037197 932 LDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPR 981 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~ 981 (1009)
..+.+........ ..+.+++.+|++.+|++||++.|+++.|+.+...
T Consensus 255 ~~~~~~~~~~~~~---~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 255 ASPDLSKLYKNCP---KAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp CCCCSTTSCSSSC---HHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred CCcchhhhhcCCc---HHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 1122211111112 2456788899999999999999999999988643
No 87
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.2e-38 Score=356.16 Aligned_cols=262 Identities=16% Similarity=0.196 Sum_probs=210.6
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCCeEEEEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
++|+..+.||+|+||.||+|.+..+++.||||++..... ...+.+|+++++++ +||||+++++++.+++..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 84 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL 84 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence 568889999999999999999999999999999865422 23467899999999 9999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCc-----EEEcccccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLE-----ARIADFGLA 851 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~-----~kl~DfGls 851 (1009)
||+ +++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 85 e~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a 157 (330)
T 2izr_A 85 ELL-GPSLEDLFDLCD---RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157 (330)
T ss_dssp ECC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTC
T ss_pred EeC-CCCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccc
Confidence 999 999999997542 2389999999999999999999999 9999999999999999887 999999999
Q ss_pred eecccCCC-------ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhh
Q 037197 852 RMMLHKNE-------TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKS 924 (1009)
Q Consensus 852 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 924 (1009)
+.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+..+.+......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~--~~~~~~~~~i~~~ 235 (330)
T 2izr_A 158 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA--DTLKERYQKIGDT 235 (330)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC--SSHHHHHHHHHHH
T ss_pred eeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccc--ccHHHHHHHHHhh
Confidence 87644332 12456799999999999999999999999999999999999999975422 2333222222111
Q ss_pred ccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 925 NKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
... ... ...+...+ ++.+++.+|++.||++||++.++++.|+++..+.
T Consensus 236 ~~~----~~~--~~~~~~~p----~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 236 KRA----TPI--EVLCENFP----EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp HHH----SCH--HHHTTTCH----HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred hcc----CCH--HHHhccCh----HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 110 000 00011111 5678899999999999999999999999886554
No 88
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.9e-38 Score=348.29 Aligned_cols=261 Identities=26% Similarity=0.363 Sum_probs=201.5
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhc--cCCCceeeEEeEEEc----C
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGR--LRHRNIVRLLGYLHN----E 769 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~Hpniv~l~~~~~~----~ 769 (1009)
+.++|+..+.||+|+||.||+|++ +++.||||++... ....+.+|.+++.. ++||||+++++++.. .
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~ 78 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSS 78 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCC
Confidence 356789999999999999999988 4789999998432 33455567776666 799999999998654 3
Q ss_pred CeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHH--------hcCCCCeEEeccCCCcEEeCCCC
Q 037197 770 TNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLH--------HDCQPPVIHRDIKSNNILLDANL 841 (1009)
Q Consensus 770 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~dlk~~NIll~~~~ 841 (1009)
...++||||+++|+|.++++.. .+++..++.++.|+++||+||| +. +|+||||||+||+++.++
T Consensus 79 ~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~ 150 (301)
T 3q4u_A 79 TQLWLITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNG 150 (301)
T ss_dssp EEEEEEECCCTTCBHHHHHTTC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTS
T ss_pred ceeEEehhhccCCCHHHHHhhc-----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCC
Confidence 5589999999999999999643 2889999999999999999999 66 999999999999999999
Q ss_pred cEEEcccccceecccCCCc----eeeecccCcccCCcccCCC------CCCcccchHhHHHHHHHHHhC----------C
Q 037197 842 EARIADFGLARMMLHKNET----VSMVAGSYGYIAPEYGYTL------KVDEKSDIYSFGVVLLELLTG----------K 901 (1009)
Q Consensus 842 ~~kl~DfGls~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~sDv~SlGvvl~elltg----------~ 901 (1009)
.+||+|||+++........ .....||+.|+|||++.+. .++.++||||||+++|||++| +
T Consensus 151 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~ 230 (301)
T 3q4u_A 151 QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 230 (301)
T ss_dssp CEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccc
Confidence 9999999999876544332 2234789999999998766 456799999999999999999 8
Q ss_pred CCCCCCCCCCccHHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhc
Q 037197 902 MPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEA 978 (1009)
Q Consensus 902 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 978 (1009)
.||............. ........ ..+.+.... ........+.+++.+||+.||++|||+.|+++.|+++
T Consensus 231 ~pf~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 231 PPFYDVVPNDPSFEDM-RKVVCVDQ-----QRPNIPNRW-FSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CTTTTTSCSSCCHHHH-HHHHTTSC-----CCCCCCGGG-GGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccccccCCCCcchhhh-hHHHhccC-----CCCCCChhh-ccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 8886544433333222 22222111 111221110 0112345677899999999999999999999999875
No 89
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.2e-38 Score=345.21 Aligned_cols=256 Identities=23% Similarity=0.399 Sum_probs=207.1
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEEe
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVYD 777 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~E 777 (1009)
++|+..+.||+|+||.||+|.+.. ++.||+|++.... ...+++.+|++++++++||||+++++++.++...++|||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGA---MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE 85 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETT-TEEEEEEEECTTS---BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhceeeheecCCCccEEEEEEecC-CCeEEEEEecccc---cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEE
Confidence 467888999999999999999986 7789999996542 234567799999999999999999999999999999999
Q ss_pred ccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecccC
Q 037197 778 YMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLHK 857 (1009)
Q Consensus 778 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~ 857 (1009)
|+++++|.++++.... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~~~~~~L~~~l~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 86 FMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp CCTTCBHHHHHHTTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred eCCCCcHHHHHHhcCc---ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 9999999999975432 378899999999999999999999 9999999999999999999999999999765332
Q ss_pred C-CceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccccccCcc
Q 037197 858 N-ETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPS 935 (1009)
Q Consensus 858 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1009)
. .......+++.|+|||......++.++||||+|+++|||++ |+.||... ......... ..+. .+.
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~-----~~~~~~~~~-~~~~------~~~ 227 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR-----SNSEVVEDI-STGF------RLY 227 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHHH-HTTC------CCC
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCC-----CHHHHHHHH-hcCc------cCC
Confidence 2 12223446778999999988889999999999999999999 99999732 222222222 2111 111
Q ss_pred ccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCC
Q 037197 936 IAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPR 981 (1009)
Q Consensus 936 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~ 981 (1009)
.....+ ..+.+++.+|++.||++||++.|+++.|+++.+.
T Consensus 228 ~~~~~~------~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 228 KPRLAS------THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp CCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCcCC------HHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 111111 2466788999999999999999999999988654
No 90
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.4e-38 Score=353.21 Aligned_cols=267 Identities=23% Similarity=0.350 Sum_probs=192.0
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
.++|+..+.||+|+||.||+|.+..+++.||+|++.... .......+.+|++++++++||||+++++++.+++..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS-TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc-ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 356888999999999999999999999999999986543 2233456779999999999999999999999999999999
Q ss_pred eccCCCChhhhhcCCcc--ccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceec
Q 037197 777 DYMPNDSLGEALHGKEA--GKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMM 854 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~ 854 (1009)
||++ |+|.+++..... ....+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9997 689998864321 122378889999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCCceeeecccCcccCCcccCC-CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccccc-
Q 037197 855 LHKNETVSMVAGSYGYIAPEYGYT-LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEAL- 932 (1009)
Q Consensus 855 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 932 (1009)
...........+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ..+....+...... ..+..
T Consensus 159 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~---~~~~~~ 233 (317)
T 2pmi_A 159 GIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN--DEEQLKLIFDIMGT---PNESLW 233 (317)
T ss_dssp TSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCS---CCTTTC
T ss_pred CCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCC---CChhHh
Confidence 544444455678999999999875 468999999999999999999999997321 11222222221110 00000
Q ss_pred ---------CccccccCc-hHH---------HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 933 ---------DPSIAGQCK-HVQ---------EEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 933 ---------~~~~~~~~~-~~~---------~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.+.+..... ... .....+.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 234 PSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 000000000 000 01125678999999999999999999875
No 91
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=5.2e-38 Score=343.70 Aligned_cols=255 Identities=32% Similarity=0.562 Sum_probs=203.5
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhH-----HHHHHHHHHHhccCCCceeeEEeEEEcCCeE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESG-----DDLFREVSLLGRLRHRNIVRLLGYLHNETNV 772 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~-----~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 772 (1009)
++|+..+.||+|+||.||+|.+..+++.||+|++.......... +.+.+|++++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 56888899999999999999999999999999986543322221 56779999999999999999999997665
Q ss_pred EEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCC--eEEeccCCCcEEeCCCCc-----EEE
Q 037197 773 MMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPP--VIHRDIKSNNILLDANLE-----ARI 845 (1009)
Q Consensus 773 ~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~dlk~~NIll~~~~~-----~kl 845 (1009)
++||||+++|+|.+++..... .+++..++.++.|+++||+|||+. + |+||||||+||+++.++. +||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTTS---CCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred eEEEEecCCCCHHHHHhcccC---CccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 699999999999998865432 388999999999999999999998 8 999999999999988776 999
Q ss_pred cccccceecccCCCceeeecccCcccCCccc--CCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHh
Q 037197 846 ADFGLARMMLHKNETVSMVAGSYGYIAPEYG--YTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIK 923 (1009)
Q Consensus 846 ~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 923 (1009)
+|||+++... .......||+.|+|||++ ....++.++||||+|+++|||++|+.||....... .........
T Consensus 171 ~Dfg~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~---~~~~~~~~~ 244 (287)
T 4f0f_A 171 ADFGLSQQSV---HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK---IKFINMIRE 244 (287)
T ss_dssp CCCTTCBCCS---SCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH---HHHHHHHHH
T ss_pred CCCCcccccc---ccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH---HHHHHHHhc
Confidence 9999997542 234456799999999997 45567899999999999999999999997543321 111222111
Q ss_pred hccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhc
Q 037197 924 SNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEA 978 (1009)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 978 (1009)
.. ..+.+...++ ..+.+++.+|++.||++||++.|+++.|+++
T Consensus 245 ~~------~~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 245 EG------LRPTIPEDCP------PRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp SC------CCCCCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred cC------CCCCCCcccC------HHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 11 1122222222 2466788999999999999999999999864
No 92
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.5e-38 Score=352.81 Aligned_cols=254 Identities=23% Similarity=0.325 Sum_probs=200.5
Q ss_pred HHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCC----
Q 037197 695 EILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNET---- 770 (1009)
Q Consensus 695 ~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~---- 770 (1009)
.+.++|+..+.||+|+||.||+|++..+++.||||++.... .....+.+.+|++++++++||||+++++++.+..
T Consensus 3 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 81 (332)
T 3qd2_B 3 RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKW 81 (332)
T ss_dssp HHHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHH
T ss_pred hhhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchh
Confidence 35678999999999999999999999889999999996543 2344567789999999999999999999985543
Q ss_pred -----------------------------------------------------eEEEEEeccCCCChhhhhcCCcccccc
Q 037197 771 -----------------------------------------------------NVMMVYDYMPNDSLGEALHGKEAGKLL 797 (1009)
Q Consensus 771 -----------------------------------------------------~~~lV~E~~~~gsL~~~l~~~~~~~~~ 797 (1009)
+.++||||+++++|.+++...... ..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-~~ 160 (332)
T 3qd2_B 82 QEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL-ED 160 (332)
T ss_dssp HHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG-GG
T ss_pred hhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc-cc
Confidence 389999999999999999876432 23
Q ss_pred ccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecccCCC------------ceeeec
Q 037197 798 VDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLHKNE------------TVSMVA 865 (1009)
Q Consensus 798 ~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~~~------------~~~~~~ 865 (1009)
.++..++.++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++....... ......
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence 56777889999999999999999 999999999999999999999999999987654321 123356
Q ss_pred ccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCccccccCchHHH
Q 037197 866 GSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQE 945 (1009)
Q Consensus 866 gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1009)
||+.|+|||++.+..++.++||||||+++|||++|..|+. ....... ...... .+ .....
T Consensus 238 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~-------~~~~~~~-~~~~~~------~~------~~~~~ 297 (332)
T 3qd2_B 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM-------ERVRIIT-DVRNLK------FP------LLFTQ 297 (332)
T ss_dssp -CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH-------HHHHHHH-HHHTTC------CC------HHHHH
T ss_pred CCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh-------HHHHHHH-HhhccC------CC------ccccc
Confidence 8999999999988899999999999999999999877643 1111111 111110 00 11122
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 946 EMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 946 ~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
....+.+++.+|++.||++||++.|+++
T Consensus 298 ~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 298 KYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred CChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 2334577899999999999999999985
No 93
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.1e-38 Score=351.01 Aligned_cols=271 Identities=23% Similarity=0.319 Sum_probs=204.5
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCC-CChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSD-NDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
.++|+..+.||+|+||.||+|.+..+++.||+|++.... .+......+.+|++++++++||||+++++++.+.+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 457899999999999999999999889999999996533 2344556677999999999999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
|||+++++|.+++.........+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999975433344488999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCcc
Q 037197 856 HKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPS 935 (1009)
Q Consensus 856 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1009)
..........+++.|+|||......++.++||||||+++|||++|+.||..... .............. .+.
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~------~~~ 258 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCKKIEQCDY------PPL 258 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C---CHHHHHHHHHTTCS------CCC
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch---hHHHHHHHhhcccC------CCC
Confidence 444444456789999999999888899999999999999999999999964322 22222222211111 111
Q ss_pred ccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCcccc
Q 037197 936 IAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRRKSI 985 (1009)
Q Consensus 936 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~~~~ 985 (1009)
...... ..+.+++.+|++.||++||++.|+++.|+++.+.....
T Consensus 259 ~~~~~~------~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~ 302 (310)
T 2wqm_A 259 PSDHYS------EELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS 302 (310)
T ss_dssp CTTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred cccccC------HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhh
Confidence 111111 24667889999999999999999999999998766543
No 94
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=9.4e-39 Score=354.54 Aligned_cols=264 Identities=24% Similarity=0.359 Sum_probs=212.0
Q ss_pred HhcCCcCceeccCCceEEEEEEEC-----CCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCe
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFH-----RPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETN 771 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~ 771 (1009)
.++|+..+.||+|+||.||+|.+. .+++.||||++... ......+.+.+|++++++++||||+++++++.+.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN-ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC-CCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 356888999999999999999873 45689999999643 234455677799999999999999999999999999
Q ss_pred EEEEEeccCCCChhhhhcCCcc--------------------ccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccC
Q 037197 772 VMMVYDYMPNDSLGEALHGKEA--------------------GKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIK 831 (1009)
Q Consensus 772 ~~lV~E~~~~gsL~~~l~~~~~--------------------~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk 831 (1009)
.++||||+++++|.+++..... ....+++.+++.++.|+++||+|||++ +|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccc
Confidence 9999999999999999976432 123478999999999999999999999 99999999
Q ss_pred CCcEEeCCCCcEEEcccccceecccCCCc--eeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCC
Q 037197 832 SNNILLDANLEARIADFGLARMMLHKNET--VSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAF 908 (1009)
Q Consensus 832 ~~NIll~~~~~~kl~DfGls~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~ 908 (1009)
|+||+++.++.+||+|||+++........ .....+++.|+|||...+..++.++||||||+++|||++ |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999876443322 223456788999999888889999999999999999999 999997432
Q ss_pred CCCccHHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 909 GGSKDIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
. ...... +..+. .+....... ..+.+++.+|++.||++||++.|+++.|+++..++
T Consensus 258 ~--~~~~~~----~~~~~------~~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 313 (314)
T 2ivs_A 258 P--ERLFNL----LKTGH------RMERPDNCS------EEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKR 313 (314)
T ss_dssp G--GGHHHH----HHTTC------CCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred H--HHHHHH----hhcCC------cCCCCccCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhhc
Confidence 2 122222 22211 111111111 24667889999999999999999999999987655
No 95
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=8.1e-39 Score=351.62 Aligned_cols=264 Identities=28% Similarity=0.386 Sum_probs=203.4
Q ss_pred HhcCCcCceeccCCceEEEEEE----ECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEc--CC
Q 037197 697 LACVKESNIIGMGGNGIVYKAE----FHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHN--ET 770 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~--~~ 770 (1009)
.++|+..+.||+|+||.||+|+ ...+++.||||++... .....+.+.+|++++++++||||+++++++.. ..
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 3568889999999999999998 4567899999998543 34445677799999999999999999999854 35
Q ss_pred eEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccc
Q 037197 771 NVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGL 850 (1009)
Q Consensus 771 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGl 850 (1009)
..++||||+++|+|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHCGG---GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred ceEEEEEeCCCCCHHHHHHhccc---ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 68999999999999999976532 378899999999999999999998 999999999999999999999999999
Q ss_pred ceecccCCC---ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCC----------CCccHHHH
Q 037197 851 ARMMLHKNE---TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFG----------GSKDIVEW 917 (1009)
Q Consensus 851 s~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~----------~~~~~~~~ 917 (1009)
++....... ......+++.|+|||.+.+..++.++||||||+++|||++|..|+..... ........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T 3ugc_A 161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240 (295)
T ss_dssp CC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence 987644332 22234467789999999888999999999999999999999999863210 00111111
Q ss_pred HHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCC
Q 037197 918 VLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKP 980 (1009)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 980 (1009)
+........ .......++ .++.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 241 ~~~~~~~~~------~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 241 LIELLKNNG------RLPRPDGCP------DEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HHHHHHTTC------CCCCCTTCC------HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHhccC------cCCCCcCcC------HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 222222111 111111111 246678899999999999999999999998764
No 96
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=350.18 Aligned_cols=268 Identities=23% Similarity=0.312 Sum_probs=200.8
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
.++|+..+.||+|+||.||+|.+..+++.||+|++..........+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 45788999999999999999999999999999999776555555667779999999999999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
||+++++|.++++.... +++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 82 e~~~~~~l~~~~~~~~~----~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 82 EYCDHTVLHELDRYQRG----VPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTG 154 (311)
T ss_dssp ECCSEEHHHHHHHTSSC----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EeCCCchHHHHHhhhcC----CCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence 99999999998865433 78899999999999999999999 999999999999999999999999999987755
Q ss_pred CCCceeeecccCcccCCcccCC-CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhh-----------
Q 037197 857 KNETVSMVAGSYGYIAPEYGYT-LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKS----------- 924 (1009)
Q Consensus 857 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~----------- 924 (1009)
.........+|+.|+|||+..+ ..++.++||||+|+++|+|++|+.||..... .+....+......
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 232 (311)
T 4agu_A 155 PSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSD--VDQLYLIRKTLGDLIPRHQQVFST 232 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCSCCHHHHHHHHT
T ss_pred cccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhccccccccccccc
Confidence 5444556678999999998765 6689999999999999999999999974211 1111111111100
Q ss_pred ccccccccCccccccCc---hHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 925 NKAQDEALDPSIAGQCK---HVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 925 ~~~~~~~~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.........+....... ........+.+++.+|++.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 233 NQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00000000000000000 00011224667899999999999999999985
No 97
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=5.3e-39 Score=359.16 Aligned_cols=250 Identities=25% Similarity=0.367 Sum_probs=203.3
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC-ChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCCeEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN-DIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNETNVMM 774 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~l 774 (1009)
.+.|+..+.||+|+||.||+|+++.+++.||+|++.+... ..........|.++++.+ +||||+++++++.+.+..|+
T Consensus 16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~l 95 (345)
T 1xjd_A 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF 95 (345)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEE
Confidence 4568889999999999999999999999999999965321 112345566899999877 99999999999999999999
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceec
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMM 854 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~ 854 (1009)
||||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 96 v~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 96 VMEYLNGGDLMYHIQSCH----KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 999999999999997533 278899999999999999999999 9999999999999999999999999999865
Q ss_pred ccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCc
Q 037197 855 LHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDP 934 (1009)
Q Consensus 855 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1009)
...........||+.|+|||++.+..++.++||||+||++|||++|+.||... +..+..... .... +
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-----~~~~~~~~i-~~~~-------~ 235 (345)
T 1xjd_A 169 MLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ-----DEEELFHSI-RMDN-------P 235 (345)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHH-HHCC-------C
T ss_pred ccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHH-HhCC-------C
Confidence 44444455678999999999999889999999999999999999999999732 222222222 2221 1
Q ss_pred cccccCchHHHHHHHHHHHHHHhccCCCCCCCCHH-HHH
Q 037197 935 SIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMR-DVI 972 (1009)
Q Consensus 935 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~-evl 972 (1009)
.+....+ ..+..++.+|++.||++||++. |++
T Consensus 236 ~~p~~~s------~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 236 FYPRWLE------KEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CCCTTSC------HHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CCCcccC------HHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 1111111 2456788999999999999997 554
No 98
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=371.95 Aligned_cols=348 Identities=20% Similarity=0.157 Sum_probs=217.0
Q ss_pred cEEEeccCccccccCcccCCCCCCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCCCeEecccc
Q 037197 237 RYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCN 316 (1009)
Q Consensus 237 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N 316 (1009)
+.++.++++++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 45666666665 4444432 45666666666666665666666666666666666666555666666666666666666
Q ss_pred ccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccCCcCccCCCCCceeecccccccccCCc
Q 037197 317 QLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPV 396 (1009)
Q Consensus 317 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~ 396 (1009)
++++..+..|.++++|++|+|++|.+.+..+..+..+++|+.|++++|.+++..+..|..+++|+.|++++|++++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 66665555566666666666666666555555555555555555555555544444555555555555555554444333
Q ss_pred ccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCccc
Q 037197 397 SLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSL 476 (1009)
Q Consensus 397 ~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 476 (1009)
.+.++++|+.|+|++|++++..+..+..+++|+.|++++|.+.+.+|..+....+|
T Consensus 171 ------------------------~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L 226 (477)
T 2id5_A 171 ------------------------ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNL 226 (477)
T ss_dssp ------------------------HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCC
T ss_pred ------------------------HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccc
Confidence 44445555555555555554444445555555555555554444444444444466
Q ss_pred chhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCcc
Q 037197 477 QTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNN 556 (1009)
Q Consensus 477 ~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 556 (1009)
+.|++++|+++...+..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..|..+++|+.|||++|
T Consensus 227 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 306 (477)
T 2id5_A 227 TSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGN 306 (477)
T ss_dssp SEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSS
T ss_pred cEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCC
Confidence 66666666666544456777777888888888877777777777888888888888888777778888888888888888
Q ss_pred ccccccCcCcCCCCCCcEEecCCCccccCCCCCCcccccCCcccccCcCCCCCCC
Q 037197 557 SLFGRIPENFGASPALEMLNLSYNKLEGPVPSNGILMNINPNELIGNAGLCGSVL 611 (1009)
Q Consensus 557 ~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~lcg~~~ 611 (1009)
+|++..+..|..+++|++|+|++|++++..+....+.......+.++...|+.|.
T Consensus 307 ~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 307 QLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp CCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred cCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCch
Confidence 8887777777788888888888888877654322222233345566666776543
No 99
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=5.2e-38 Score=343.13 Aligned_cols=255 Identities=23% Similarity=0.297 Sum_probs=207.4
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
+.++|+..+.||+|+||.||+|.+..+++.||+|++..........+.+.+|++++++++||||+++++++.++...++|
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 45678999999999999999999999999999999976655555566777999999999999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCc---EEEcccccce
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLE---ARIADFGLAR 852 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~---~kl~DfGls~ 852 (1009)
|||+++++|.+.+.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||.+.
T Consensus 84 ~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 84 FDLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp ECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 99999999999886543 278899999999999999999999 9999999999999987655 9999999998
Q ss_pred ecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccccc
Q 037197 853 MMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEAL 932 (1009)
Q Consensus 853 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1009)
..... .......||+.|+|||...+..++.++||||+|+++|+|++|+.||... +.............. ..
T Consensus 157 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~-----~~~~~~~~~~~~~~~---~~ 227 (284)
T 3kk8_A 157 EVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE-----DQHRLYAQIKAGAYD---YP 227 (284)
T ss_dssp ECCSS-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCC---CC
T ss_pred EcccC-ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCC-----chhHHHHHHHhcccc---CC
Confidence 76433 2334467899999999999989999999999999999999999999632 222222222211111 11
Q ss_pred CccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 933 DPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 933 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.+... . .. ..+.+++.+|++.||++|||+.|+++
T Consensus 228 ~~~~~-~---~~---~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 228 SPEWD-T---VT---PEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp TTTTT-T---SC---HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred chhhc-c---cC---HHHHHHHHHHcccChhhCCCHHHHhc
Confidence 11111 1 11 24567889999999999999999987
No 100
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.9e-38 Score=348.62 Aligned_cols=249 Identities=18% Similarity=0.214 Sum_probs=198.2
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCCeEEE
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNETNVMM 774 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~l 774 (1009)
+.++|+..+.||+|+||+||+|.+..+++.||||++...........+...|+..+.++ +||||+++++++.+++..++
T Consensus 55 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 45789999999999999999999998899999999876655555566666777776666 89999999999999999999
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceec
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMM 854 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~ 854 (1009)
||||+ +++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 135 v~e~~-~~~L~~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~ 207 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWG---ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207 (311)
T ss_dssp EEECC-CCBHHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEEC
T ss_pred EEecc-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeec
Confidence 99999 778998886543 2389999999999999999999998 9999999999999999999999999999876
Q ss_pred ccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCc
Q 037197 855 LHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDP 934 (1009)
Q Consensus 855 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1009)
... .......||+.|+|||++.+ .++.++|||||||++|||++|..|+.. . ... ..+..+ ...+
T Consensus 208 ~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~----~-~~~----~~~~~~-----~~~~ 271 (311)
T 3p1a_A 208 GTA-GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHG----G-EGW----QQLRQG-----YLPP 271 (311)
T ss_dssp C-------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSS----H-HHH----HHHTTT-----CCCH
T ss_pred ccC-CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCC----c-cHH----HHHhcc-----CCCc
Confidence 432 23344568999999998775 789999999999999999999766542 1 111 111111 1111
Q ss_pred cccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 935 SIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 935 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.+.... ...+.+++.+|++.||++|||+.|+++
T Consensus 272 ~~~~~~------~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 272 EFTAGL------SSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HHHTTS------CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccccCC------CHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 121111 234678899999999999999999984
No 101
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-38 Score=350.05 Aligned_cols=247 Identities=23% Similarity=0.301 Sum_probs=202.7
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC-ChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN-DIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
+.|+..+.||+|+||.||+|++..+++.||+|++.+... .....+.+.+|+.+++.++||||+++++++.+....++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 568889999999999999999999999999999864321 1123455668999999999999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
||+++|+|.+++..... +++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~gg~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQR----FPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp CCCCSCBHHHHHHHTSS----CCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred eCCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 99999999999975432 78889999999999999999998 999999999999999999999999999987533
Q ss_pred CCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCccc
Q 037197 857 KNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSI 936 (1009)
Q Consensus 857 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1009)
......||+.|+|||++.+..++.++|||||||++|||++|+.||... +............. .+
T Consensus 159 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-----~~~~~~~~i~~~~~--------~~ 222 (318)
T 1fot_A 159 ---VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS-----NTMKTYEKILNAEL--------RF 222 (318)
T ss_dssp ---CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHHCCC--------CC
T ss_pred ---ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCC--------CC
Confidence 233467999999999999889999999999999999999999999632 22222222222211 11
Q ss_pred cccCchHHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 037197 937 AGQCKHVQEEMLLVLRIAVLCTAKLPKGRP-----TMRDVIT 973 (1009)
Q Consensus 937 ~~~~~~~~~~~~~l~~l~~~cl~~dp~~RP-----s~~evl~ 973 (1009)
..... .++..++.+|++.||++|| ++.|+++
T Consensus 223 p~~~~------~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 223 PPFFN------EDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp CTTSC------HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred CCCCC------HHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 11111 2456788899999999999 8888873
No 102
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=356.96 Aligned_cols=253 Identities=23% Similarity=0.314 Sum_probs=203.4
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCC-CChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSD-NDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
.+.|+..+.||+|+||.||+|.+..+++.||+|++.+.. ........+.+|++++++++||||+++++++.+.+..++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 356889999999999999999999999999999985432 1122345677999999999999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
|||+.+|+|.+++..... +++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 94 ~e~~~gg~L~~~l~~~~~----l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNVH----FKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp ECCCTTEEHHHHHHTTCC----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 999999999999976432 78899999999999999999999 99999999999999999999999999998764
Q ss_pred cCCCceeeecccCcccCCcccCC---CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccccc
Q 037197 856 HKNETVSMVAGSYGYIAPEYGYT---LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEAL 932 (1009)
Q Consensus 856 ~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1009)
. ........||+.|+|||++.. ..++.++|||||||++|||++|+.||...... .....+........
T Consensus 167 ~-~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~--~~~~~~~~~~~~~~------ 237 (384)
T 4fr4_A 167 R-ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST--SSKEIVHTFETTVV------ 237 (384)
T ss_dssp T-TCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS--CHHHHHHHHHHCCC------
T ss_pred C-CCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc--cHHHHHHHHhhccc------
Confidence 3 334455679999999999763 45889999999999999999999999743221 22222222211111
Q ss_pred CccccccCchHHHHHHHHHHHHHHhccCCCCCCCC-HHHHHH
Q 037197 933 DPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPT-MRDVIT 973 (1009)
Q Consensus 933 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs-~~evl~ 973 (1009)
.+..... ..+..++.+|++.||++||+ +.++.+
T Consensus 238 --~~p~~~s------~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 --TYPSAWS------QEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp --CCCTTSC------HHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred --CCCCcCC------HHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 1111111 24567889999999999998 666654
No 103
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=6e-38 Score=349.02 Aligned_cols=256 Identities=23% Similarity=0.305 Sum_probs=208.2
Q ss_pred HHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCCh----hhHHHHHHHHHHHhccCCCceeeEEeEEEcCC
Q 037197 695 EILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDI----ESGDDLFREVSLLGRLRHRNIVRLLGYLHNET 770 (1009)
Q Consensus 695 ~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~ 770 (1009)
.+.+.|+..+.||+|+||.||+|.+..+++.||+|++....... ...+.+.+|++++++++||||+++++++.++.
T Consensus 9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 88 (321)
T 2a2a_A 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT 88 (321)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence 45678999999999999999999999999999999997543222 13566779999999999999999999999999
Q ss_pred eEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCC----cEEEc
Q 037197 771 NVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANL----EARIA 846 (1009)
Q Consensus 771 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~----~~kl~ 846 (1009)
..++||||+++++|.+++.... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++ .+||+
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~ 161 (321)
T 2a2a_A 89 DVVLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLI 161 (321)
T ss_dssp EEEEEECCCCSCBHHHHHHTCS----CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred EEEEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEc
Confidence 9999999999999999997543 278999999999999999999999 999999999999999887 79999
Q ss_pred ccccceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcc
Q 037197 847 DFGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNK 926 (1009)
Q Consensus 847 DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 926 (1009)
|||++...... .......||+.|+|||...+..++.++||||||+++|+|++|+.||... ...+.+........
T Consensus 162 Dfg~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----~~~~~~~~i~~~~~ 235 (321)
T 2a2a_A 162 DFGLAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD-----TKQETLANITSVSY 235 (321)
T ss_dssp CCTTCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS-----SHHHHHHHHHTTCC
T ss_pred cCccceecCcc-ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHhccc
Confidence 99999876443 2334456899999999998889999999999999999999999999632 22222222221111
Q ss_pred ccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 927 AQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
..++...... ...+.+++.+|++.||++|||+.|+++
T Consensus 236 ----~~~~~~~~~~------~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 ----DFDEEFFSHT------SELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp ----CCCHHHHTTC------CHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ----ccChhhhccc------CHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1111111111 124567889999999999999999986
No 104
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.7e-38 Score=355.31 Aligned_cols=254 Identities=25% Similarity=0.303 Sum_probs=203.6
Q ss_pred HHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCCeEE
Q 037197 695 EILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 695 ~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~ 773 (1009)
.+.+.|+..+.||+|+||.||+|.++.+++.||||++.+... ...+|++++.++ +||||+++++++.+++..|
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~ 92 (342)
T 2qr7_A 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVY 92 (342)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEE
T ss_pred CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEE
Confidence 467789999999999999999999999999999999965432 234688888888 7999999999999999999
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCC----CcEEEcccc
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDAN----LEARIADFG 849 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~----~~~kl~DfG 849 (1009)
+||||+++|+|.+++..... +++.++..++.||+.||+|||+. +|+||||||+||++..+ +.+||+|||
T Consensus 93 lv~E~~~gg~L~~~i~~~~~----~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg 165 (342)
T 2qr7_A 93 VVTELMKGGELLDKILRQKF----FSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFG 165 (342)
T ss_dssp EEECCCCSCBHHHHHHTCTT----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCT
T ss_pred EEEeCCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECC
Confidence 99999999999999976432 78999999999999999999999 99999999999998543 359999999
Q ss_pred cceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccc
Q 037197 850 LARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQD 929 (1009)
Q Consensus 850 ls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (1009)
+++.............||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+.. ..+..+...
T Consensus 166 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~~-~~i~~~~~~- 241 (342)
T 2qr7_A 166 FAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD--DTPEEIL-ARIGSGKFS- 241 (342)
T ss_dssp TCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT--SCHHHHH-HHHHHCCCC-
T ss_pred CcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc--CCHHHHH-HHHccCCcc-
Confidence 998775555555567789999999998887789999999999999999999999974321 2222222 222222210
Q ss_pred cccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 930 EALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
........ .. ..+.+++.+|++.||++||++.|+++
T Consensus 242 --~~~~~~~~---~s---~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 242 --LSGGYWNS---VS---DTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp --CCSTTTTT---SC---HHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred --cCcccccc---CC---HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11101011 11 24567888999999999999999875
No 105
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=8.6e-39 Score=356.61 Aligned_cols=259 Identities=24% Similarity=0.387 Sum_probs=200.3
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeE----EEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMV----VAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 773 (1009)
++|+..+.||+|+||.||+|.+..+++. ||+|.+... ......+.+.+|++++++++||||+++++++.++. .+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccc-cCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 5688899999999999999998776654 578877543 22344567779999999999999999999998765 78
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
+|+||+++|+|.+++..... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKD---NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTT---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred EEEEecCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 99999999999999976432 378899999999999999999999 999999999999999999999999999987
Q ss_pred cccCCC--ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhcccccc
Q 037197 854 MLHKNE--TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDE 930 (1009)
Q Consensus 854 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1009)
...... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... ...... +..+..
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~----~~~~~~--- 237 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSI----LEKGER--- 237 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHH----HHTTCC---
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH--HHHHHH----HHcCCC---
Confidence 644332 2233456789999999999999999999999999999999 9999974322 222222 221110
Q ss_pred ccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 931 ALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
......+ ...+..++.+||+.||++||++.|+++.|+.+....
T Consensus 238 ---~~~~~~~------~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~ 280 (327)
T 3poz_A 238 ---LPQPPIC------TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp ---CCCCTTB------CHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSH
T ss_pred ---CCCCccC------CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhh
Confidence 0111111 124667899999999999999999999999886643
No 106
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=9.6e-39 Score=361.64 Aligned_cols=263 Identities=25% Similarity=0.338 Sum_probs=209.0
Q ss_pred HhcCCcCceeccCCceEEEEEE-----ECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCC
Q 037197 697 LACVKESNIIGMGGNGIVYKAE-----FHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNET 770 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~ 770 (1009)
.++|+..+.||+|+||.||+|. ...+++.||||++... ......+.+.+|+++++++ +||||+++++++.+.+
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 99 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 99 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc-CCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence 4678999999999999999998 4556799999999654 2334456677999999999 7999999999998754
Q ss_pred -eEEEEEeccCCCChhhhhcCCccc-------------------------------------------------------
Q 037197 771 -NVMMVYDYMPNDSLGEALHGKEAG------------------------------------------------------- 794 (1009)
Q Consensus 771 -~~~lV~E~~~~gsL~~~l~~~~~~------------------------------------------------------- 794 (1009)
..++||||+++|+|.++++.....
T Consensus 100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (359)
T 3vhe_A 100 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 179 (359)
T ss_dssp SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence 489999999999999999765421
Q ss_pred -------cccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecccCCC--ceeeec
Q 037197 795 -------KLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLHKNE--TVSMVA 865 (1009)
Q Consensus 795 -------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~~~--~~~~~~ 865 (1009)
+..+++..++.++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++....... ......
T Consensus 180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 256 (359)
T 3vhe_A 180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256 (359)
T ss_dssp ----CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CE
T ss_pred ccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccC
Confidence 11278999999999999999999999 999999999999999999999999999987644332 233456
Q ss_pred ccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccccccCccccccCchHH
Q 037197 866 GSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQ 944 (1009)
Q Consensus 866 gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 944 (1009)
+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... ..+......+.. ........
T Consensus 257 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~~~~~~~~~------~~~~~~~~--- 322 (359)
T 3vhe_A 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-----EEFCRRLKEGTR------MRAPDYTT--- 322 (359)
T ss_dssp ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-----HHHHHHHHHTCC------CCCCTTCC---
T ss_pred CCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh-----HHHHHHHHcCCC------CCCCCCCC---
Confidence 8899999999988899999999999999999998 99999743222 122222222211 11111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCC
Q 037197 945 EEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKP 980 (1009)
Q Consensus 945 ~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 980 (1009)
.++.+++.+|++.||++|||+.|+++.|+.+.+
T Consensus 323 ---~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 323 ---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp ---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 246678899999999999999999999998763
No 107
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.7e-39 Score=358.18 Aligned_cols=247 Identities=26% Similarity=0.333 Sum_probs=199.6
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCC-hhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDND-IESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
.++|+..+.||+|+||.||+|.+..+++.||||++...... ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35688899999999999999999999999999998543111 12234677999999999999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
|||+ +|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 88 ~E~~-~g~l~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK----RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp ECCC-CEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EECC-CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 9999 788998886543 278999999999999999999999 99999999999999999999999999998664
Q ss_pred cCCCceeeecccCcccCCcccCCCCC-CcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccC-
Q 037197 856 HKNETVSMVAGSYGYIAPEYGYTLKV-DEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALD- 933 (1009)
Q Consensus 856 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 933 (1009)
.. .......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||+....... ...+..
T Consensus 160 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~---------------~~~i~~~ 223 (336)
T 3h4j_B 160 DG-NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL---------------FKKVNSC 223 (336)
T ss_dssp TS-BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC---------------BCCCCSS
T ss_pred CC-cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH---------------HHHHHcC
Confidence 33 33345679999999999887775 6899999999999999999999974322100 000000
Q ss_pred -ccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 934 -PSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 934 -~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
..+.... ...+.+++.+|++.||++|||+.|+++
T Consensus 224 ~~~~p~~~------s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 224 VYVMPDFL------SPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp CCCCCTTS------CHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred CCCCcccC------CHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 1111111 124567889999999999999999975
No 108
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.7e-38 Score=353.21 Aligned_cols=262 Identities=24% Similarity=0.287 Sum_probs=204.3
Q ss_pred HHHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCC---CChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCC
Q 037197 694 SEILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSD---NDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNET 770 (1009)
Q Consensus 694 ~~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~ 770 (1009)
.++.++|+..+.||+|+||.||+|.+..+++.||+|++.... ......+.+.+|++++++++||||+++++++.+.+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 677889999999999999999999999999999999985431 12344567779999999999999999999999999
Q ss_pred eEEEEEeccCCCChhhhhcCCcc------------------------------------ccccccHHHHHHHHHHHHHHH
Q 037197 771 NVMMVYDYMPNDSLGEALHGKEA------------------------------------GKLLVDWVSRYNIAVGIAQGL 814 (1009)
Q Consensus 771 ~~~lV~E~~~~gsL~~~l~~~~~------------------------------------~~~~~~~~~~~~i~~~i~~~L 814 (1009)
..++||||+++|+|.+++..... ....+++..++.++.|+++||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 99999999999999999853111 022356778889999999999
Q ss_pred HHHHhcCCCCeEEeccCCCcEEeCCCC--cEEEcccccceecccCCC----ceeeecccCcccCCcccCC--CCCCcccc
Q 037197 815 NYLHHDCQPPVIHRDIKSNNILLDANL--EARIADFGLARMMLHKNE----TVSMVAGSYGYIAPEYGYT--LKVDEKSD 886 (1009)
Q Consensus 815 ~~LH~~~~~~ivH~dlk~~NIll~~~~--~~kl~DfGls~~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~sD 886 (1009)
+|||+. +|+||||||+||+++.++ .+||+|||+++.+..... ......||+.|+|||++.. ..++.++|
T Consensus 182 ~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D 258 (345)
T 3hko_A 182 HYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258 (345)
T ss_dssp HHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred HHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence 999999 999999999999998776 899999999987644321 2345678999999998764 67889999
Q ss_pred hHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCC
Q 037197 887 IYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRP 966 (1009)
Q Consensus 887 v~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RP 966 (1009)
|||||+++|||++|+.||... .....+........ ....+... .. ...+.+++.+|++.||++||
T Consensus 259 iwslG~il~el~~g~~pf~~~-----~~~~~~~~~~~~~~---~~~~~~~~-~~------~~~~~~li~~~l~~~p~~Rp 323 (345)
T 3hko_A 259 AWSAGVLLHLLLMGAVPFPGV-----NDADTISQVLNKKL---CFENPNYN-VL------SPLARDLLSNLLNRNVDERF 323 (345)
T ss_dssp HHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCC---CTTSGGGG-GS------CHHHHHHHHHHSCSCTTTSC
T ss_pred HHHHHHHHHHHHHCCCCCCCC-----ChHHHHHHHHhccc---ccCCcccc-cC------CHHHHHHHHHHcCCChhHCC
Confidence 999999999999999999732 22222222222211 11111111 11 12456788999999999999
Q ss_pred CHHHHHH
Q 037197 967 TMRDVIT 973 (1009)
Q Consensus 967 s~~evl~ 973 (1009)
++.|+++
T Consensus 324 s~~~~l~ 330 (345)
T 3hko_A 324 DAMRALQ 330 (345)
T ss_dssp CHHHHHH
T ss_pred CHHHHhc
Confidence 9999986
No 109
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.2e-38 Score=352.53 Aligned_cols=248 Identities=23% Similarity=0.332 Sum_probs=179.8
Q ss_pred CceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccC-CCceeeEEeEEEcCCeEEEEEeccCC
Q 037197 703 SNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLR-HRNIVRLLGYLHNETNVMMVYDYMPN 781 (1009)
Q Consensus 703 ~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~lV~E~~~~ 781 (1009)
.+.||+|+||.||+|.+..+++.||||++... ......+|+++++++. ||||+++++++.++...++||||+++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 47899999999999999999999999998432 3456668999999997 99999999999999999999999999
Q ss_pred CChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCC---cEEEcccccceecccCC
Q 037197 782 DSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANL---EARIADFGLARMMLHKN 858 (1009)
Q Consensus 782 gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~---~~kl~DfGls~~~~~~~ 858 (1009)
|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++......
T Consensus 91 ~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 163 (325)
T 3kn6_A 91 GELFERIKKKK----HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN 163 (325)
T ss_dssp CBHHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--
T ss_pred CcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC
Confidence 99999997643 288999999999999999999999 999999999999998765 89999999998765555
Q ss_pred CceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCC--CccHHHHHHHHHhhccccccccCccc
Q 037197 859 ETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGG--SKDIVEWVLSMIKSNKAQDEALDPSI 936 (1009)
Q Consensus 859 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1009)
.......+|+.|+|||++.+..++.++||||||+++|||++|+.||...... .....+ +...+..+.. ....
T Consensus 164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~-~~~~i~~~~~---~~~~-- 237 (325)
T 3kn6_A 164 QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE-IMKKIKKGDF---SFEG-- 237 (325)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHH-HHHHHTTTCC---CCCS--
T ss_pred CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHH-HHHHHHcCCC---CCCc--
Confidence 5555667899999999999889999999999999999999999999743221 112222 2222222210 0010
Q ss_pred cccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Q 037197 937 AGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVI 972 (1009)
Q Consensus 937 ~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl 972 (1009)
........++.+++.+|++.||++|||++|++
T Consensus 238 ----~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell 269 (325)
T 3kn6_A 238 ----EAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLR 269 (325)
T ss_dssp ----HHHHTSCHHHHHHHHHHHCCCTTTCCCTTTST
T ss_pred ----ccccCCCHHHHHHHHHHCCCChhHCCCHHHHh
Confidence 00111123467889999999999999999886
No 110
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.8e-38 Score=355.95 Aligned_cols=251 Identities=24% Similarity=0.291 Sum_probs=203.7
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC-ChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCCeEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN-DIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNETNVMM 774 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~l 774 (1009)
.+.|+..+.||+|+||.||+|+++.+++.||+|++.+... .....+.+..|..+++.+ +||+|+++++++.+.+..|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 3568889999999999999999999999999999865321 112345667899999988 89999999999999999999
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceec
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMM 854 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~ 854 (1009)
||||+++|+|.+++..... +++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 99 v~E~~~gg~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVGR----FKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171 (353)
T ss_dssp EEECCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEeCCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence 9999999999999975432 78899999999999999999999 9999999999999999999999999999865
Q ss_pred ccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCc
Q 037197 855 LHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDP 934 (1009)
Q Consensus 855 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1009)
...........||+.|+|||++.+..++.++|||||||++|||++|+.||... +..+..........
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~-----~~~~~~~~i~~~~~-------- 238 (353)
T 2i0e_A 172 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE-----DEDELFQSIMEHNV-------- 238 (353)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCC--------
T ss_pred ccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC-----CHHHHHHHHHhCCC--------
Confidence 44444555678999999999999889999999999999999999999999732 22222222222111
Q ss_pred cccccCchHHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q 037197 935 SIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPT-----MRDVIT 973 (1009)
Q Consensus 935 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs-----~~evl~ 973 (1009)
.+....+ .++..++.+|++.||++||+ +.|+++
T Consensus 239 ~~p~~~s------~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 239 AYPKSMS------KEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp CCCTTSC------HHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred CCCCCCC------HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 1111111 24567889999999999996 456553
No 111
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-38 Score=356.41 Aligned_cols=264 Identities=27% Similarity=0.431 Sum_probs=210.3
Q ss_pred HhcCCcCceeccCCceEEEEEEEC-----CCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCe
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFH-----RPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETN 771 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~ 771 (1009)
.++|+..+.||+|+||.||+|.+. .+++.||||+++... .....+.+.+|++++++++||||+++++++.+++.
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 457889999999999999999987 345899999996542 33445667799999999999999999999999999
Q ss_pred EEEEEeccCCCChhhhhcCCccc--------------------cccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccC
Q 037197 772 VMMVYDYMPNDSLGEALHGKEAG--------------------KLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIK 831 (1009)
Q Consensus 772 ~~lV~E~~~~gsL~~~l~~~~~~--------------------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk 831 (1009)
.++||||+++|+|.++++..... ...+++.+++.++.||++||+|||++ +|+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 99999999999999999764211 13488999999999999999999999 99999999
Q ss_pred CCcEEeCCCCcEEEcccccceecccCC--CceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCC
Q 037197 832 SNNILLDANLEARIADFGLARMMLHKN--ETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAF 908 (1009)
Q Consensus 832 ~~NIll~~~~~~kl~DfGls~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~ 908 (1009)
|+||+++.++.+||+|||+++...... .......+|+.|+|||.+....++.++||||||+++|||++ |+.||...
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~- 280 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM- 280 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC-
Confidence 999999999999999999998654332 22334567889999999888889999999999999999999 99999632
Q ss_pred CCCccHHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 909 GGSKDIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
...+.. ..+..+.. +.....++ ..+.+++.+||+.||++||++.|+++.|+++..+.
T Consensus 281 ----~~~~~~-~~~~~~~~------~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 281 ----AHEEVI-YYVRDGNI------LACPENCP------LELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp ----CHHHHH-HHHHTTCC------CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred ----ChHHHH-HHHhCCCc------CCCCCCCC------HHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 112222 22222211 11111111 24667889999999999999999999999998654
No 112
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.2e-38 Score=352.87 Aligned_cols=262 Identities=26% Similarity=0.329 Sum_probs=198.2
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC-ChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCC----
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN-DIESGDDLFREVSLLGRLRHRNIVRLLGYLHNET---- 770 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~---- 770 (1009)
+.++|+..+.||+|+||.||+|.+..+++.||||++..... .......+.+|++++++++||||+++++++....
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 45678999999999999999999999999999999976433 2334456779999999999999999999987654
Q ss_pred eEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccc
Q 037197 771 NVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGL 850 (1009)
Q Consensus 771 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGl 850 (1009)
..++||||+++++|.++++... .+++.+++.++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 162 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGI 162 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSC
T ss_pred ccEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccC
Confidence 3499999999999999997543 278999999999999999999999 999999999999999999999999999
Q ss_pred ceecccCCC---ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccc
Q 037197 851 ARMMLHKNE---TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKA 927 (1009)
Q Consensus 851 s~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 927 (1009)
++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||... ...............
T Consensus 163 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~-----~~~~~~~~~~~~~~~ 237 (311)
T 3ork_A 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD-----SPVSVAYQHVREDPI 237 (311)
T ss_dssp C------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHHHHHCCCC
T ss_pred cccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHhcCCCC
Confidence 987644322 223456899999999998889999999999999999999999999732 222222222222211
Q ss_pred cccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHH-HHHHHhhcC
Q 037197 928 QDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRD-VITMLGEAK 979 (1009)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~e-vl~~L~~~~ 979 (1009)
..... .... ...+.+++.+|++.||++||++.+ +.+.+.+..
T Consensus 238 ~~~~~----~~~~------~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 238 PPSAR----HEGL------SADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp CHHHH----STTC------CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred Ccccc----cCCC------CHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 00000 0011 124567889999999999996555 445665553
No 113
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=3.1e-38 Score=344.69 Aligned_cols=257 Identities=22% Similarity=0.328 Sum_probs=204.4
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
.++|+..+.||+|+||.||+|.+.. +..||+|++.... ...+++.+|++++++++||||+++++++.+.+..++||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGS---MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT 98 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETT-TEEEEEEEECTTS---BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcC-CCeEEEEEecCCC---CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEE
Confidence 3568888999999999999999885 7889999996542 23456779999999999999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
||+++++|.+++..... .+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 99 e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 99 EYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp CCCTTCBHHHHHHCGGG---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred eccCCCcHHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 99999999999976432 288999999999999999999999 999999999999999999999999999976533
Q ss_pred CC-CceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccccccCc
Q 037197 857 KN-ETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDP 934 (1009)
Q Consensus 857 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1009)
.. .......+|+.|+|||......++.++||||+|+++|||++ |+.||.... ....... +..+. ..
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~-----~~~~~~~-~~~~~------~~ 240 (283)
T 3gen_A 173 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT-----NSETAEH-IAQGL------RL 240 (283)
T ss_dssp HHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC-----HHHHHHH-HHTTC------CC
T ss_pred cccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC-----hhHHHHH-Hhccc------CC
Confidence 22 11223346778999999988889999999999999999998 999997421 1222222 22111 11
Q ss_pred cccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCC
Q 037197 935 SIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPR 981 (1009)
Q Consensus 935 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~ 981 (1009)
....... ..+.+++.+|++.||++|||+.|+++.|+++..+
T Consensus 241 ~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 241 YRPHLAS------EKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp CCCTTCC------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCcCC------HHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 1111111 2466788999999999999999999999988654
No 114
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=7.5e-38 Score=344.47 Aligned_cols=264 Identities=15% Similarity=0.152 Sum_probs=210.0
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCCeEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~lV 775 (1009)
.++|+..+.||+|+||.||+|.+..+++.||||++.... ....+.+|+++++++ +|+|++++++++.++...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 84 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 84 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence 456889999999999999999999999999999985442 223466899999999 799999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCc-----EEEccccc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLE-----ARIADFGL 850 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~-----~kl~DfGl 850 (1009)
|||+ +++|.+++..... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 85 ~e~~-~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~ 157 (298)
T 1csn_A 85 IDLL-GPSLEDLLDLCGR---KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157 (298)
T ss_dssp EECC-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred EEec-CCCHHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence 9999 9999999975432 378999999999999999999998 9999999999999988776 99999999
Q ss_pred ceecccCCC-------ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHh
Q 037197 851 ARMMLHKNE-------TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIK 923 (1009)
Q Consensus 851 s~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 923 (1009)
++....... ......||+.|+|||+..+..++.++||||||+++|||++|+.||...... ...........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~~~~~~~~ 235 (298)
T 1csn_A 158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA--TNKQKYERIGE 235 (298)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC--CHHHHHHHHHH
T ss_pred ccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcc--ccHHHHHHHHh
Confidence 987654332 234567999999999999889999999999999999999999999754322 11111111111
Q ss_pred hccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 924 SNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
.... ...+.+...+ ...+.+++.+|++.||++||+++++++.|+++..+.
T Consensus 236 ~~~~---~~~~~~~~~~------~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~ 285 (298)
T 1csn_A 236 KKQS---TPLRELCAGF------PEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 285 (298)
T ss_dssp HHHH---SCHHHHTTTS------CHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred hccC---ccHHHHHhhC------cHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence 1100 0000111111 124667889999999999999999999999987544
No 115
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-38 Score=357.75 Aligned_cols=265 Identities=23% Similarity=0.338 Sum_probs=208.1
Q ss_pred HhcCCcCceeccCCceEEEEEEE-----CCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCC
Q 037197 697 LACVKESNIIGMGGNGIVYKAEF-----HRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNET 770 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~ 770 (1009)
.++|+..+.||+|+||.||+|.+ ..+++.||||++.... .....+.+.+|+++++++ +||||+++++++...+
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 46788999999999999999997 3457789999996432 233456777999999999 8999999999999999
Q ss_pred eEEEEEeccCCCChhhhhcCCccc-------------------cccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccC
Q 037197 771 NVMMVYDYMPNDSLGEALHGKEAG-------------------KLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIK 831 (1009)
Q Consensus 771 ~~~lV~E~~~~gsL~~~l~~~~~~-------------------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk 831 (1009)
..++||||+++|+|.+++...... ...+++..++.++.||++||+|||+. +|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence 999999999999999999765321 12378899999999999999999999 99999999
Q ss_pred CCcEEeCCCCcEEEcccccceecccCCC--ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCC
Q 037197 832 SNNILLDANLEARIADFGLARMMLHKNE--TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAF 908 (1009)
Q Consensus 832 ~~NIll~~~~~~kl~DfGls~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~ 908 (1009)
|+||+++.++.+||+|||++........ ......+|+.|+|||...+..++.++||||||+++|||+| |..||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999987654432 2233557889999999888889999999999999999998 999997432
Q ss_pred CCCccHHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 909 GGSKDIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
.. ..+......+. .+......+ ..+..++.+||+.||++||++.|+++.|+.+....
T Consensus 280 ~~-----~~~~~~~~~~~------~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 280 VD-----ANFYKLIQNGF------KMDQPFYAT------EEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp CS-----HHHHHHHHTTC------CCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred cH-----HHHHHHHhcCC------CCCCCCCCC------HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 21 11222222221 111111111 24667889999999999999999999999987654
No 116
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.2e-38 Score=363.82 Aligned_cols=254 Identities=20% Similarity=0.270 Sum_probs=202.1
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC-ChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN-DIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
.+.|+..+.||+|+||.||+|+++.+++.||+|++.+... .......+.+|+.+++.++||||+++++++.+++..|+|
T Consensus 68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 147 (410)
T 3v8s_A 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV 147 (410)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 4578999999999999999999999999999999854211 111223466899999999999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
|||+++|+|.++++... +++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 148 ~E~~~gg~L~~~l~~~~-----~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~ 219 (410)
T 3v8s_A 148 MEYMPGGDLVNLMSNYD-----VPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 219 (410)
T ss_dssp ECCCTTEEHHHHHHHCC-----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EeCCCCCcHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeec
Confidence 99999999999996532 78888889999999999999999 99999999999999999999999999998764
Q ss_pred cCCC-ceeeecccCcccCCcccCCCC----CCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccc
Q 037197 856 HKNE-TVSMVAGSYGYIAPEYGYTLK----VDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDE 930 (1009)
Q Consensus 856 ~~~~-~~~~~~gt~~y~aPE~~~~~~----~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1009)
.... ......||+.|+|||++.... ++.++|||||||++|||++|+.||... +..............
T Consensus 220 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~-----~~~~~~~~i~~~~~~--- 291 (410)
T 3v8s_A 220 KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD-----SLVGTYSKIMNHKNS--- 291 (410)
T ss_dssp TTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHTHHHH---
T ss_pred cCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC-----ChhhHHHHHHhcccc---
Confidence 4332 233567999999999987654 789999999999999999999999732 222222222221110
Q ss_pred ccCccccccCchHHHHHHHHHHHHHHhccCCCCC--CCCHHHHHH
Q 037197 931 ALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKG--RPTMRDVIT 973 (1009)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~--RPs~~evl~ 973 (1009)
...+... .. . .++..++.+|++.+|++ ||++.|+++
T Consensus 292 ~~~p~~~-~~---s---~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 292 LTFPDDN-DI---S---KEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp CCCCTTC-CC---C---HHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred ccCCCcc-cc---c---HHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 0011100 11 1 24567888999999999 999999986
No 117
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=361.10 Aligned_cols=264 Identities=25% Similarity=0.350 Sum_probs=208.5
Q ss_pred HhcCCcCceeccCCceEEEEEEE-----CCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCe
Q 037197 697 LACVKESNIIGMGGNGIVYKAEF-----HRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETN 771 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~ 771 (1009)
.++|+..+.||+|+||.||+|.+ ..+++.||||++... .......++.+|+.++++++||||+++++++.+...
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc-cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 35688889999999999999994 446789999999543 234445567799999999999999999999999999
Q ss_pred EEEEEeccCCCChhhhhcCCcc---ccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCC---cEEE
Q 037197 772 VMMVYDYMPNDSLGEALHGKEA---GKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANL---EARI 845 (1009)
Q Consensus 772 ~~lV~E~~~~gsL~~~l~~~~~---~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~---~~kl 845 (1009)
.++||||+++|+|.++++.... ....+++.+++.++.||++||+|||++ +|+||||||+||+++.++ .+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEE
Confidence 9999999999999999975432 223488999999999999999999999 999999999999999555 5999
Q ss_pred cccccceecccCC--CceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHH
Q 037197 846 ADFGLARMMLHKN--ETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMI 922 (1009)
Q Consensus 846 ~DfGls~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~ 922 (1009)
+|||+++...... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||... ...+.. ..+
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~-----~~~~~~-~~i 299 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----SNQEVL-EFV 299 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-----CHHHHH-HHH
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----CHHHHH-HHH
Confidence 9999998653322 23334567899999999988899999999999999999998 99999732 222222 222
Q ss_pred hhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 923 KSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
..+.. ......+. ..+.+++.+||+.||++||++.|+++.|+.+....
T Consensus 300 ~~~~~------~~~~~~~~------~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 300 TSGGR------MDPPKNCP------GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp HTTCC------CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred HcCCC------CCCCccCC------HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 22211 11111111 24567889999999999999999999999886544
No 118
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=4.1e-38 Score=353.25 Aligned_cols=248 Identities=19% Similarity=0.234 Sum_probs=203.4
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC-ChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN-DIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
.++|+..+.||+|+||.||+|++..+++.||+|++.+... .....+.+.+|++++++++||||+++++++.+....|+|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 3568889999999999999999999999999999854321 122345677999999999999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
|||+++|+|.+++..... +++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~e~~~gg~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~ 192 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192 (350)
T ss_dssp EECCTTCBHHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EcCCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceecc
Confidence 999999999999975432 78899999999999999999999 99999999999999999999999999998763
Q ss_pred cCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCcc
Q 037197 856 HKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPS 935 (1009)
Q Consensus 856 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1009)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||... +..+....... +.. .
T Consensus 193 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-----~~~~~~~~i~~-~~~-------~ 256 (350)
T 1rdq_E 193 GR---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD-----QPIQIYEKIVS-GKV-------R 256 (350)
T ss_dssp SC---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHH-CCC-------C
T ss_pred CC---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC-----CHHHHHHHHHc-CCC-------C
Confidence 32 23457999999999999889999999999999999999999999732 22222222222 211 1
Q ss_pred ccccCchHHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q 037197 936 IAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPT-----MRDVIT 973 (1009)
Q Consensus 936 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs-----~~evl~ 973 (1009)
+..... ..+..++.+|++.||++||+ +.|+++
T Consensus 257 ~p~~~~------~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 257 FPSHFS------SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp CCTTCC------HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CCCCCC------HHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 111111 24567889999999999998 777764
No 119
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=4.8e-38 Score=353.37 Aligned_cols=252 Identities=23% Similarity=0.342 Sum_probs=189.0
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
+.+.|+..+.||+|+||.||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 126 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV 126 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence 3567888999999999999999999999999999996532 234566899999999999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCC---CCcEEEcccccce
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDA---NLEARIADFGLAR 852 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~DfGls~ 852 (1009)
|||+++|+|.+++..... +++.+++.++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++
T Consensus 127 ~e~~~~~~L~~~l~~~~~----~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~ 199 (349)
T 2w4o_A 127 LELVTGGELFDRIVEKGY----YSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199 (349)
T ss_dssp ECCCCSCBHHHHHTTCSS----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred EEeCCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence 999999999999975432 78899999999999999999999 9999999999999975 8899999999998
Q ss_pred ecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccccc
Q 037197 853 MMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEAL 932 (1009)
Q Consensus 853 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1009)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......+.... ....
T Consensus 200 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~~i~~~~--~~~~ 271 (349)
T 2w4o_A 200 IVEHQ-VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD-----QFMFRRILNCE--YYFI 271 (349)
T ss_dssp --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH-----HHHHHHHHTTC--CCCC
T ss_pred ccCcc-cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc-----HHHHHHHHhCC--CccC
Confidence 65332 2334567899999999999888999999999999999999999999643211 11112222111 0111
Q ss_pred CccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 933 DPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 933 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.+... .. ...+.+++.+|++.||++|||+.|+++
T Consensus 272 ~~~~~-~~------~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 272 SPWWD-EV------SLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TTTTT-TS------CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred Cchhh-hC------CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111 11 124567889999999999999999986
No 120
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.1e-38 Score=357.94 Aligned_cols=251 Identities=25% Similarity=0.291 Sum_probs=196.0
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCC-hhhHHHHHHHHHH-HhccCCCceeeEEeEEEcCCeEEEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDND-IESGDDLFREVSL-LGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~-l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
+.|+..+.||+|+||.||+|+++.+++.||+|++.+.... ......+++|..+ ++.++||||+++++++.+.+..|+|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 5688899999999999999999999999999999765322 2233455677776 5778999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 118 ~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 118 LDYINGGELFYHLQRER----CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 99999999999997543 278888889999999999999999 99999999999999999999999999998654
Q ss_pred cCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCcc
Q 037197 856 HKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPS 935 (1009)
Q Consensus 856 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1009)
..........||+.|+|||++.+..++.++|||||||++|||++|+.||... +..+.......... .+.+.
T Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~-----~~~~~~~~i~~~~~----~~~~~ 261 (373)
T 2r5t_A 191 EHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----NTAEMYDNILNKPL----QLKPN 261 (373)
T ss_dssp CCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS-----BHHHHHHHHHHSCC----CCCSS
T ss_pred cCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC-----CHHHHHHHHHhccc----CCCCC
Confidence 4444555678999999999999989999999999999999999999999732 22233222222111 11111
Q ss_pred ccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 037197 936 IAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITM 974 (1009)
Q Consensus 936 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 974 (1009)
+ . ..+..++.+|++.||++||++.+.+++
T Consensus 262 ~----~------~~~~~li~~lL~~dp~~R~~~~~~~~~ 290 (373)
T 2r5t_A 262 I----T------NSARHLLEGLLQKDRTKRLGAKDDFME 290 (373)
T ss_dssp S----C------HHHHHHHHHHTCSSGGGSTTTTTTHHH
T ss_pred C----C------HHHHHHHHHHcccCHHhCCCCCCCHHH
Confidence 1 1 235678899999999999998644433
No 121
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-37 Score=344.55 Aligned_cols=265 Identities=23% Similarity=0.285 Sum_probs=201.7
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC-ChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEE
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN-DIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMM 774 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 774 (1009)
..++|+..+.||+|+||.||+|.+..+++.||+|++..... +....+.+.+|++++++++||||+++++++..++..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 45778999999999999999999998899999999865432 22334667799999999999999999999999999999
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceec
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMM 854 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~ 854 (1009)
||||+++++|.+++.... .+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 112 v~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQG----PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASAT 184 (309)
T ss_dssp EEECCCCEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred EEEecCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence 999999999999997543 278999999999999999999999 9999999999999999999999999999766
Q ss_pred ccCC-CceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccC
Q 037197 855 LHKN-ETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALD 933 (1009)
Q Consensus 855 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (1009)
.... .......+++.|+|||...+..++.++||||||+++|||++|+.||... . ...+...+...........
T Consensus 185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----~-~~~~~~~~~~~~~~~~~~~ 258 (309)
T 2h34_A 185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD-----Q-LSVMGAHINQAIPRPSTVR 258 (309)
T ss_dssp ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSC-----H-HHHHHHHHHSCCCCGGGTS
T ss_pred cccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCc-----h-HHHHHHHhccCCCCccccC
Confidence 4432 2233456899999999998888999999999999999999999999732 1 1222222222211111111
Q ss_pred ccccccCchHHHHHHHHHHHHHHhccCCCCCCC-CHHHHHHHHhhcCCCcc
Q 037197 934 PSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRP-TMRDVITMLGEAKPRRK 983 (1009)
Q Consensus 934 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RP-s~~evl~~L~~~~~~~~ 983 (1009)
+.+ + ..+.+++.+|++.||++|| ++.++++.|+.+.....
T Consensus 259 ~~~----~------~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 259 PGI----P------VAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp TTC----C------THHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred CCC----C------HHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 111 1 1356788999999999999 99999999999876553
No 122
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=356.39 Aligned_cols=248 Identities=21% Similarity=0.282 Sum_probs=204.7
Q ss_pred HHHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChh------hHHHHHHHHHHHhccCCCceeeEEeEEE
Q 037197 694 SEILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIE------SGDDLFREVSLLGRLRHRNIVRLLGYLH 767 (1009)
Q Consensus 694 ~~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~E~~~l~~l~Hpniv~l~~~~~ 767 (1009)
.++.++|+..+.||+|+||.||+|.+..+++.||||++........ ....+.+|++++++++||||+++++++.
T Consensus 20 ~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~ 99 (335)
T 3dls_A 20 GEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFE 99 (335)
T ss_dssp THHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEE
T ss_pred cccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 4567889999999999999999999999999999999976532211 2334568999999999999999999999
Q ss_pred cCCeEEEEEeccCCC-ChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEc
Q 037197 768 NETNVMMVYDYMPND-SLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIA 846 (1009)
Q Consensus 768 ~~~~~~lV~E~~~~g-sL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 846 (1009)
+.+..++||||+.+| +|.+++..... +++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 100 ~~~~~~lv~e~~~~g~~l~~~~~~~~~----l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~ 172 (335)
T 3dls_A 100 NQGFFQLVMEKHGSGLDLFAFIDRHPR----LDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLI 172 (335)
T ss_dssp CSSEEEEEEECCTTSCBHHHHHHTCCC----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEEC
T ss_pred eCCEEEEEEEeCCCCccHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEe
Confidence 999999999999777 99999976543 78999999999999999999999 99999999999999999999999
Q ss_pred ccccceecccCCCceeeecccCcccCCcccCCCCC-CcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhc
Q 037197 847 DFGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKV-DEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSN 925 (1009)
Q Consensus 847 DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 925 (1009)
|||+++..... .......||+.|+|||++.+..+ +.++||||||+++|||++|+.||......
T Consensus 173 Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------------- 236 (335)
T 3dls_A 173 DFGSAAYLERG-KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET--------------- 236 (335)
T ss_dssp CCTTCEECCTT-CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG---------------
T ss_pred ecccceECCCC-CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH---------------
Confidence 99999876443 33345679999999999887776 78999999999999999999999631100
Q ss_pred cccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 037197 926 KAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITM 974 (1009)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 974 (1009)
......+ .... ...+.+++.+|++.||++|||+.|+++-
T Consensus 237 --~~~~~~~--~~~~------~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 --VEAAIHP--PYLV------SKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp --TTTCCCC--SSCC------CHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred --HhhccCC--Cccc------CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000110 0011 1246678899999999999999999874
No 123
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=7.6e-38 Score=354.49 Aligned_cols=253 Identities=21% Similarity=0.309 Sum_probs=198.6
Q ss_pred cCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEEeccCC
Q 037197 702 ESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVYDYMPN 781 (1009)
Q Consensus 702 ~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~E~~~~ 781 (1009)
..+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTR--GMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEccc--ccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 356899999999999999999999999999653 234456677999999999999999999999999999999999999
Q ss_pred CChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEe--CCCCcEEEcccccceecccCCC
Q 037197 782 DSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILL--DANLEARIADFGLARMMLHKNE 859 (1009)
Q Consensus 782 gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll--~~~~~~kl~DfGls~~~~~~~~ 859 (1009)
++|.+++.... ..+++..++.++.||++||+|||+. +|+||||||+||++ +.++.+||+|||+++.+....
T Consensus 171 ~~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~- 243 (373)
T 2x4f_A 171 GELFDRIIDES---YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE- 243 (373)
T ss_dssp CEEHHHHHHTG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC-
T ss_pred CcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc-
Confidence 99999886542 2378899999999999999999999 99999999999999 567899999999998764332
Q ss_pred ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCcccccc
Q 037197 860 TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSIAGQ 939 (1009)
Q Consensus 860 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 939 (1009)
......||+.|+|||++....++.++|||||||++|||++|+.||... +....+........... ..... .
T Consensus 244 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~-----~~~~~~~~i~~~~~~~~---~~~~~-~ 314 (373)
T 2x4f_A 244 KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGD-----NDAETLNNILACRWDLE---DEEFQ-D 314 (373)
T ss_dssp BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHHTCCCSC---SGGGT-T
T ss_pred ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhccCCCC---hhhhc-c
Confidence 334456999999999998888999999999999999999999999732 22233333332221111 11111 1
Q ss_pred CchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH--HHhhc
Q 037197 940 CKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT--MLGEA 978 (1009)
Q Consensus 940 ~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~--~L~~~ 978 (1009)
. ..++.+++.+|++.||++||++.|+++ .+.+.
T Consensus 315 ---~---~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 315 ---I---SEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp ---S---CHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred ---C---CHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 1 124567889999999999999999987 55443
No 124
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=344.93 Aligned_cols=252 Identities=24% Similarity=0.346 Sum_probs=182.2
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCC-hhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDND-IESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
.++|+..+.||+|+||.||+|++..+++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35688899999999999999999888999999998543111 12235677999999999999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
|||+++++|.+++.... ..+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 90 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRV---KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EECCTTEEHHHHHHTCS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 99999999999997643 2378999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCcc
Q 037197 856 HKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPS 935 (1009)
Q Consensus 856 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1009)
..........|++.|+|||...+..++.++||||||+++|||++|+.||...... . .... .. ..+..
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~---~~~~----~~----~~~~~ 230 (278)
T 3cok_A 164 MPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK--N---TLNK----VV----LADYE 230 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------------CC----SSCCC
T ss_pred CCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH--H---HHHH----Hh----hcccC
Confidence 4444444567899999999998888999999999999999999999999743221 0 0000 00 00111
Q ss_pred ccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 936 IAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 936 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.....+ .++.+++.+|++.||++||+++|+++
T Consensus 231 ~~~~~~------~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 231 MPSFLS------IEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CCTTSC------HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CccccC------HHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 111111 24567899999999999999999875
No 125
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=8.5e-38 Score=341.49 Aligned_cols=257 Identities=24% Similarity=0.328 Sum_probs=200.3
Q ss_pred HHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEE
Q 037197 695 EILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMM 774 (1009)
Q Consensus 695 ~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 774 (1009)
.+.++|...+.||+|+||.||+|.+..+++.||+|++..... ....+.+.+|++++++++||||+++++++.+....++
T Consensus 19 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 97 (285)
T 3is5_A 19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYI 97 (285)
T ss_dssp CHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc-chhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEE
Confidence 456789999999999999999999999999999999865432 2335677799999999999999999999999999999
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEe---CCCCcEEEcccccc
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILL---DANLEARIADFGLA 851 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~DfGls 851 (1009)
||||+++|+|.+++.........+++..++.++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a 174 (285)
T 3is5_A 98 VMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174 (285)
T ss_dssp EECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred EEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence 9999999999999865433334488999999999999999999999 99999999999999 45678999999999
Q ss_pred eecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccc
Q 037197 852 RMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEA 931 (1009)
Q Consensus 852 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1009)
...... .......||+.|+|||.+. ..++.++||||||+++|||++|+.||... ...... ........
T Consensus 175 ~~~~~~-~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~-----~~~~~~-~~~~~~~~---- 242 (285)
T 3is5_A 175 ELFKSD-EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGT-----SLEEVQ-QKATYKEP---- 242 (285)
T ss_dssp CC-----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHH-HHHHHCCC----
T ss_pred eecCCc-ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCC-----CHHHHH-hhhccCCc----
Confidence 765432 2334567899999999875 56899999999999999999999999732 112221 11111111
Q ss_pred cCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 932 LDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.......... .++.+++.+|++.||++|||+.|+++
T Consensus 243 ---~~~~~~~~~~---~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 243 ---NYAVECRPLT---PQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ---CCCC--CCCC---HHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ---ccccccCcCC---HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0100101111 24567889999999999999999974
No 126
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=7.6e-38 Score=342.68 Aligned_cols=261 Identities=29% Similarity=0.452 Sum_probs=197.9
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
.++|+..+.||+|+||.||+|++.. .||+|++..........+.+.+|++++++++||||+++++++ .....++||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 4568899999999999999998754 599999976665566667788999999999999999999976 455689999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
||+++++|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 99 e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 99 QWCEGSSLYHHLHASET---KFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp ECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred EecCCCcHHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccc
Confidence 99999999999965432 378899999999999999999999 999999999999999999999999999976543
Q ss_pred CC--CceeeecccCcccCCcccC---CCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccc
Q 037197 857 KN--ETVSMVAGSYGYIAPEYGY---TLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEA 931 (1009)
Q Consensus 857 ~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1009)
.. .......||+.|+|||.+. ...++.++||||||+++|||++|+.||..... ...+...+..+..
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~~~~---- 243 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN-----RDQIIEMVGRGSL---- 243 (289)
T ss_dssp -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC-----HHHHHHHHHHTSC----
T ss_pred ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch-----HHHHHHHhccccc----
Confidence 22 2334457899999999876 56688899999999999999999999974321 1222222222221
Q ss_pred cCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCC
Q 037197 932 LDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKP 980 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 980 (1009)
.+.+........ ..+.+++.+|++.||++||++.|+++.|+++.+
T Consensus 244 -~~~~~~~~~~~~---~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 244 -SPDLSKVRSNCP---KRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp -CCCTTSSCTTSC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred -CcchhhccccCC---HHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 111111111111 246678899999999999999999999999875
No 127
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=3.2e-38 Score=352.27 Aligned_cols=265 Identities=21% Similarity=0.284 Sum_probs=194.5
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
..++|+..+.||+|+||.||+|.+..+++.||||++............+.+|++++++++||||+++++++.+++..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 45679999999999999999999999999999999976554444456677999999999999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeC-----CCCcEEEccccc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLD-----ANLEARIADFGL 850 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~-----~~~~~kl~DfGl 850 (1009)
|||++ |+|.+++..... +++..+..++.||++||+|||+. +|+||||||+||+++ +++.+||+|||+
T Consensus 112 ~e~~~-~~L~~~~~~~~~----~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDKNPD----VSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EECCS-EEHHHHHHHCTT----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EecCC-CCHHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 99997 599999876543 78899999999999999999999 999999999999994 455699999999
Q ss_pred ceecccCCCceeeecccCcccCCcccCCC-CCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhc-ccc
Q 037197 851 ARMMLHKNETVSMVAGSYGYIAPEYGYTL-KVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSN-KAQ 928 (1009)
Q Consensus 851 s~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~-~~~ 928 (1009)
++.............+|+.|+|||++.+. .++.++|||||||++|||++|+.||... .....+....... ...
T Consensus 184 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-----~~~~~~~~~~~~~~~~~ 258 (329)
T 3gbz_A 184 ARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD-----SEIDQLFKIFEVLGLPD 258 (329)
T ss_dssp HHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHHHCCCC
T ss_pred ccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCC-----CHHHHHHHHHHHhCCCc
Confidence 98765444455556789999999998764 4899999999999999999999999732 1122222222111 100
Q ss_pred cccc---------CccccccCc-hHHH-----HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 929 DEAL---------DPSIAGQCK-HVQE-----EMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 929 ~~~~---------~~~~~~~~~-~~~~-----~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.... ...+..... .... ...++.+++.+|++.||++|||+.|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 259 DTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000 000000000 0000 1134678999999999999999999974
No 128
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.3e-38 Score=344.97 Aligned_cols=260 Identities=24% Similarity=0.302 Sum_probs=208.6
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEE--cCCeEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLH--NETNVMM 774 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~--~~~~~~l 774 (1009)
.++|+..+.||+|+||.||+|.+..+++.||+|++..........+.+.+|++++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 35788899999999999999999999999999999766555566677789999999999999999999874 4678999
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCC-----eEEeccCCCcEEeCCCCcEEEcccc
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPP-----VIHRDIKSNNILLDANLEARIADFG 849 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~-----ivH~dlk~~NIll~~~~~~kl~DfG 849 (1009)
||||+++++|.+++.........+++..++.++.|+++||+|||+. + |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 9999999999999976544444589999999999999999999998 7 9999999999999999999999999
Q ss_pred cceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccc
Q 037197 850 LARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQD 929 (1009)
Q Consensus 850 ls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (1009)
.++.............|++.|+|||...+..++.++||||||+++|+|++|+.||.... ... +...+..+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~-~~~~i~~~~~-- 233 (279)
T 2w5a_A 162 LARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS-----QKE-LAGKIREGKF-- 233 (279)
T ss_dssp HHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHH-HHHHHHHTCC--
T ss_pred hheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC-----HHH-HHHHHhhccc--
Confidence 99776443333334568999999999988889999999999999999999999997421 112 2222222221
Q ss_pred cccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhh
Q 037197 930 EALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGE 977 (1009)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~ 977 (1009)
+.+...++ .++.+++.+|++.||++||++.|+++.+..
T Consensus 234 ----~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 234 ----RRIPYRYS------DELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp ----CCCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred ----ccCCcccC------HHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 11111111 245678899999999999999999986543
No 129
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.7e-38 Score=354.04 Aligned_cols=259 Identities=23% Similarity=0.334 Sum_probs=202.6
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeE----EEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMV----VAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 773 (1009)
++|+..+.||+|+||.||+|.+..+++. ||+|.+.... .......+.+|+.++++++||||+++++++. +...+
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 4578889999999999999999877665 7778774332 2233345668999999999999999999986 45689
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
+||||+++|+|.+++..... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 91 ~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHRG---ALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp EEEECCTTCBSHHHHHSSGG---GSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred EEEEeCCCCCHHHHHHHccc---cCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccc
Confidence 99999999999999976532 378889999999999999999999 999999999999999999999999999987
Q ss_pred cccCCC--ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhcccccc
Q 037197 854 MLHKNE--TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDE 930 (1009)
Q Consensus 854 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1009)
...... ......+++.|+|||++....++.++||||||+++|||++ |+.||...... .... .+..+.. .
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~----~~~~~~~--~ 236 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPD----LLEKGER--L 236 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHH----HHHTTCB--C
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHH----HHHcCCC--C
Confidence 644332 3344567889999999988889999999999999999999 99999743221 2222 2222210 0
Q ss_pred ccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 931 ALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
....... ..+..++.+||+.||++||++.|+++.|+.+....
T Consensus 237 ~~~~~~~----------~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 237 AQPQICT----------IDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp CCCTTBC----------TTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred CCCCcCc----------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 1111111 12456888999999999999999999999987654
No 130
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6e-38 Score=340.04 Aligned_cols=254 Identities=21% Similarity=0.331 Sum_probs=206.1
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcC--CeEEEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNE--TNVMMV 775 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~--~~~~lV 775 (1009)
++|+..+.||+|+||.||+|++. ++.||||++..........+.+.+|++++++++||||+++++++.+. ...++|
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 56888899999999999999986 78899999977655566667788999999999999999999999877 788999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCC--eEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPP--VIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
|||+++|+|.++++... ...+++..++.++.|+++||+|||+. + |+||||||+||+++.++.++++|||++..
T Consensus 88 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGT--NFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EECCTTCBHHHHHHSCS--SCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred ecccCCCcHHHHHhhcc--cCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceee
Confidence 99999999999997643 22479999999999999999999998 7 99999999999999999999999988754
Q ss_pred cccCCCceeeecccCcccCCcccCCCCCCc---ccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccc
Q 037197 854 MLHKNETVSMVAGSYGYIAPEYGYTLKVDE---KSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDE 930 (1009)
Q Consensus 854 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1009)
... ....+|+.|+|||.+.+..++. ++||||||+++|||++|+.||... .............
T Consensus 163 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~-----~~~~~~~~~~~~~----- 227 (271)
T 3kmu_A 163 FQS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL-----SNMEIGMKVALEG----- 227 (271)
T ss_dssp TSC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTS-----CHHHHHHHHHHSC-----
T ss_pred ecc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcccc-----ChHHHHHHHHhcC-----
Confidence 322 2245789999999987665544 799999999999999999999732 2222222222221
Q ss_pred ccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCC
Q 037197 931 ALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKP 980 (1009)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 980 (1009)
..+.+....+ ..+.+++.+|++.||++|||+.|+++.|+++.+
T Consensus 228 -~~~~~~~~~~------~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 228 -LRPTIPPGIS------PHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp -CCCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred -CCCCCCCCCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1122222222 246678899999999999999999999999875
No 131
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=5.7e-38 Score=349.69 Aligned_cols=251 Identities=20% Similarity=0.303 Sum_probs=192.7
Q ss_pred HhcCCcCceeccCCceEEEEEEEC---CCCeEEEEEEcccCCC--ChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCe
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFH---RPHMVVAVKKLWRSDN--DIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETN 771 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~---~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~ 771 (1009)
.++|+..+.||+|+||.||+|++. .+++.||+|++.+... .......+.+|++++++++||||+++++++.+++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 356889999999999999999985 5789999999965432 12234456689999999999999999999999999
Q ss_pred EEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccc
Q 037197 772 VMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLA 851 (1009)
Q Consensus 772 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls 851 (1009)
.++||||+++++|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 168 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG----IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLC 168 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred EEEEEeCCCCCcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcc
Confidence 999999999999999996543 278888999999999999999999 9999999999999999999999999999
Q ss_pred eecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccc
Q 037197 852 RMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEA 931 (1009)
Q Consensus 852 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1009)
+.............||+.|+|||++.+..++.++||||||+++|||++|+.||... +....+........
T Consensus 169 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~-----~~~~~~~~i~~~~~----- 238 (327)
T 3a62_A 169 KESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE-----NRKKTIDKILKCKL----- 238 (327)
T ss_dssp ----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHHHHHTCC-----
T ss_pred cccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHhCCC-----
Confidence 76544444444567999999999998888999999999999999999999999732 22222222222211
Q ss_pred cCccccccCchHHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 037197 932 LDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRP-----TMRDVIT 973 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RP-----s~~evl~ 973 (1009)
.+..... ..+.+++.+|++.||++|| ++.|+++
T Consensus 239 ---~~p~~~~------~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 239 ---NLPPYLT------QEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp ---CCCTTSC------HHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred ---CCCCCCC------HHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 1111111 2456788999999999999 6777765
No 132
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.7e-38 Score=360.06 Aligned_cols=278 Identities=20% Similarity=0.290 Sum_probs=215.5
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCC--eEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNET--NVMM 774 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~--~~~l 774 (1009)
.++|+..+.||+|+||.||+|.+..+++.||||++..... ....+.+.+|++++++++||||+++++++.+.. ..++
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l 86 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence 3568899999999999999999999999999999864321 233456679999999999999999999998755 7899
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEe----CCCCcEEEccccc
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILL----DANLEARIADFGL 850 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll----~~~~~~kl~DfGl 850 (1009)
||||+++|+|.++++..... ..+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 87 v~e~~~~g~L~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 87 IMEFCPCGSLYTVLEEPSNA-YGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp EECCCTTEEHHHHTTSGGGT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred EEecCCCCCHHHHHHhhhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 99999999999999765432 2378999999999999999999999 99999999999999 7788899999999
Q ss_pred ceecccCCCceeeecccCcccCCcccCC--------CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHH
Q 037197 851 ARMMLHKNETVSMVAGSYGYIAPEYGYT--------LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMI 922 (1009)
Q Consensus 851 s~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 922 (1009)
++...... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||....... ...+.+....
T Consensus 163 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~-~~~~~~~~~~ 240 (396)
T 4eut_A 163 ARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR-RNKEVMYKII 240 (396)
T ss_dssp CEECCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTT-TCHHHHHHHH
T ss_pred ceEccCCC-ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCccc-chHHHHHHHh
Confidence 98764332 3334569999999998654 567889999999999999999999997543322 2223333332
Q ss_pred hhccccccc------------cCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 923 KSNKAQDEA------------LDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 923 ~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
. +...... ....+...+.-.......+..++.+|++.||++||++.|+++.++++..++
T Consensus 241 ~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 241 T-GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp H-SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred c-CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 2 2111100 001111111212334455778999999999999999999999999987654
No 133
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.8e-38 Score=353.80 Aligned_cols=267 Identities=22% Similarity=0.310 Sum_probs=194.4
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCe---EEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeE-
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHM---VVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNV- 772 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~- 772 (1009)
.++|+..+.||+|+||.||+|.+..++. .||||++..........+.+.+|++++++++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 3568899999999999999999887654 899999976544555667788999999999999999999999877655
Q ss_pred -----EEEEeccCCCChhhhhcCCcc--ccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEE
Q 037197 773 -----MMVYDYMPNDSLGEALHGKEA--GKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARI 845 (1009)
Q Consensus 773 -----~lV~E~~~~gsL~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl 845 (1009)
++||||+++|+|.+++..... ....+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEE
Confidence 999999999999999864432 222488999999999999999999999 9999999999999999999999
Q ss_pred cccccceecccCCC--ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHH
Q 037197 846 ADFGLARMMLHKNE--TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMI 922 (1009)
Q Consensus 846 ~DfGls~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~ 922 (1009)
+|||+++....... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... ......+
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~~~~---- 252 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN--AEIYNYL---- 252 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHH----
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh--HHHHHHH----
Confidence 99999987644332 2233456789999999988889999999999999999999 9999974322 1222211
Q ss_pred hhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCccc
Q 037197 923 KSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRRKS 984 (1009)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~~~ 984 (1009)
..+.. ....... ...+.+++.+|++.||++|||+.|+++.|+++......
T Consensus 253 ~~~~~------~~~~~~~------~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~ 302 (323)
T 3qup_A 253 IGGNR------LKQPPEC------MEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSV 302 (323)
T ss_dssp HTTCC------CCCCTTC------CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred hcCCC------CCCCCcc------CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhh
Confidence 11110 0111111 12466789999999999999999999999998765543
No 134
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.3e-37 Score=338.74 Aligned_cols=254 Identities=23% Similarity=0.253 Sum_probs=204.2
Q ss_pred HHHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEE
Q 037197 694 SEILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 694 ~~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 773 (1009)
.++.++|+..+.||+|+||.||+|.+..++..||+|++..... ...+.+.+|++++++++||||+++++++.+....+
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (277)
T 3f3z_A 5 GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIY 82 (277)
T ss_dssp -CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEE
Confidence 4467789999999999999999999999999999999865432 33566779999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEe---CCCCcEEEccccc
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILL---DANLEARIADFGL 850 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~DfGl 850 (1009)
+||||+++++|.+++..... +++..++.++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 83 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~ 155 (277)
T 3f3z_A 83 LVMELCTGGELFERVVHKRV----FRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGL 155 (277)
T ss_dssp EEEECCCSCBHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEeccCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEeccc
Confidence 99999999999998865432 78999999999999999999999 99999999999999 7888999999999
Q ss_pred ceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccc
Q 037197 851 ARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDE 930 (1009)
Q Consensus 851 s~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1009)
+...... .......+|+.|+|||...+ .++.++||||||+++|||++|+.||... ...............
T Consensus 156 ~~~~~~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~--- 225 (277)
T 3f3z_A 156 AARFKPG-KMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAP-----TDSEVMLKIREGTFT--- 225 (277)
T ss_dssp CEECCTT-SCBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCC---
T ss_pred ceeccCc-cchhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHhCCCC---
Confidence 9876433 33345579999999998765 4899999999999999999999999742 112222222111110
Q ss_pred ccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 931 ALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
........ ....+.+++.+|++.||++||++.|+++
T Consensus 226 -~~~~~~~~------~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 226 -FPEKDWLN------VSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp -CCHHHHTT------SCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -CCchhhhc------CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000001 1134667889999999999999999875
No 135
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.6e-38 Score=358.27 Aligned_cols=204 Identities=31% Similarity=0.508 Sum_probs=168.0
Q ss_pred HHHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccC-CCceeeEEeEEEcCC--
Q 037197 694 SEILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLR-HRNIVRLLGYLHNET-- 770 (1009)
Q Consensus 694 ~~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~-- 770 (1009)
..+.++|+..+.||+|+||.||+|.+..+++.||||++..............+|+.+++++. ||||+++++++...+
T Consensus 5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~ 84 (388)
T 3oz6_A 5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR 84 (388)
T ss_dssp HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence 45678899999999999999999999999999999999766555666777889999999997 999999999997544
Q ss_pred eEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccc
Q 037197 771 NVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGL 850 (1009)
Q Consensus 771 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGl 850 (1009)
..|+||||++ ++|.++++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 85 ~~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~ 155 (388)
T 3oz6_A 85 DVYLVFDYME-TDLHAVIRAN-----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGL 155 (388)
T ss_dssp CEEEEEECCS-EEHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEecccC-cCHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcc
Confidence 7899999997 6899988653 278888899999999999999999 999999999999999999999999999
Q ss_pred ceecccC---------------------CCceeeecccCcccCCcccCC-CCCCcccchHhHHHHHHHHHhCCCCCCC
Q 037197 851 ARMMLHK---------------------NETVSMVAGSYGYIAPEYGYT-LKVDEKSDIYSFGVVLLELLTGKMPLDP 906 (1009)
Q Consensus 851 s~~~~~~---------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlGvvl~elltg~~Pf~~ 906 (1009)
++.+... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 156 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 233 (388)
T 3oz6_A 156 SRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG 233 (388)
T ss_dssp CEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence 9865321 112334579999999998876 6789999999999999999999999973
No 136
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=4.6e-38 Score=366.32 Aligned_cols=262 Identities=24% Similarity=0.323 Sum_probs=198.4
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcC------
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNE------ 769 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~------ 769 (1009)
+.++|+..+.||+|+||.||+|.+..+++.||||++..........+++.+|+++++.++||||+++++++...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 35679999999999999999999999999999999976544555667788999999999999999999999654
Q ss_pred CeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccc
Q 037197 770 TNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFG 849 (1009)
Q Consensus 770 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfG 849 (1009)
...|+||||++++ +.+.+... +++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 140 ~~~~lv~E~~~~~-l~~~~~~~------l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 140 QDVYLVMELMDAN-LCQVIQME------LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp CEEEEEEECCSEE-HHHHHTSC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred CeEEEEEeCCCCC-HHHHHhhc------CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEE
Confidence 4579999999765 66666432 78888999999999999999999 99999999999999999999999999
Q ss_pred cceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhh-cccc
Q 037197 850 LARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKS-NKAQ 928 (1009)
Q Consensus 850 ls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~-~~~~ 928 (1009)
+++.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||... +....+...+.. +...
T Consensus 210 ~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~-----~~~~~~~~i~~~lg~p~ 283 (464)
T 3ttj_A 210 LARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-----DYIDQWNKVIEQLGTPC 283 (464)
T ss_dssp CC------CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHHHCSCC
T ss_pred eeeecCC-CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHHhcCCCC
Confidence 9987643 23344567999999999999999999999999999999999999999732 111122111111 1100
Q ss_pred ccc--------------------------cCccc-cccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 929 DEA--------------------------LDPSI-AGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 929 ~~~--------------------------~~~~~-~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.+. +...+ ............++.+++.+|++.||++|||++|+++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 284 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 00000 0000111112345788999999999999999999986
No 137
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.4e-38 Score=340.18 Aligned_cols=249 Identities=22% Similarity=0.333 Sum_probs=180.4
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCC-hhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDND-IESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
.++|+..+.||+|+||.||+|.+..+++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 35689999999999999999999999999999999654322 23345677999999999999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
|||+ ++++.+++..... +++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 92 ~e~~-~~~l~~~~~~~~~----~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 163 (275)
T 2eue_A 92 IEYA-GNELFDYIVQRDK----MSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp EECC-CEEHHHHHHTSSS----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC----
T ss_pred ehhc-CCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceecc
Confidence 9999 7788888765432 78999999999999999999999 99999999999999999999999999997654
Q ss_pred cCCCceeeecccCcccCCcccCCCCC-CcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCc
Q 037197 856 HKNETVSMVAGSYGYIAPEYGYTLKV-DEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDP 934 (1009)
Q Consensus 856 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1009)
.. .......||+.|+|||...+..+ +.++||||+|+++|||++|+.||... ..............
T Consensus 164 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----~~~~~~~~~~~~~~-------- 229 (275)
T 2eue_A 164 DG-NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE-----SIPVLFKNISNGVY-------- 229 (275)
T ss_dssp ------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCC--------
T ss_pred Cc-ccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCC--------
Confidence 33 22344568999999999887665 78999999999999999999999732 22222222221111
Q ss_pred cccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 935 SIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 935 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.+..... ..+.+++.+|++.||++|||+.|+++
T Consensus 230 ~~~~~~~------~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 230 TLPKFLS------PGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CCCTTSC------HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCCccCC------HHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 1111111 23567889999999999999999863
No 138
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.5e-37 Score=339.43 Aligned_cols=264 Identities=23% Similarity=0.303 Sum_probs=207.3
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCCh----hhHHHHHHHHHHHhccCCCceeeEEeEEEcCCe
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDI----ESGDDLFREVSLLGRLRHRNIVRLLGYLHNETN 771 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~ 771 (1009)
+.++|+..+.||+|+||.||+|.+..+++.||+|++....... ...+.+.+|++++++++||||+++++++.+...
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T 3bhy_A 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTD 82 (283)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCe
Confidence 3467899999999999999999999989999999986543221 235667799999999999999999999999999
Q ss_pred EEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCC----cEEEcc
Q 037197 772 VMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANL----EARIAD 847 (1009)
Q Consensus 772 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~----~~kl~D 847 (1009)
.++||||+++++|.+++.... .+++.+++.++.|+++||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~d 155 (283)
T 3bhy_A 83 VVLILELVSGGELFDFLAEKE----SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLID 155 (283)
T ss_dssp EEEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECC
T ss_pred EEEEEeecCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEe
Confidence 999999999999999996532 378999999999999999999999 999999999999998877 899999
Q ss_pred cccceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccc
Q 037197 848 FGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKA 927 (1009)
Q Consensus 848 fGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 927 (1009)
||.+....... ......+++.|+|||......++.++||||||+++|+|++|+.||... ..............
T Consensus 156 fg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-----~~~~~~~~~~~~~~- 228 (283)
T 3bhy_A 156 FGIAHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE-----TKQETLTNISAVNY- 228 (283)
T ss_dssp CTTCEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHTTCC-
T ss_pred cccceeccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCc-----chHHHHHHhHhccc-
Confidence 99998764332 234456899999999998888999999999999999999999999732 11222222111111
Q ss_pred cccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH--HHhhcCCCc
Q 037197 928 QDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT--MLGEAKPRR 982 (1009)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~--~L~~~~~~~ 982 (1009)
...+...... ...+.+++.+|++.||++||++.|+++ .++.+..+.
T Consensus 229 ---~~~~~~~~~~------~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~ 276 (283)
T 3bhy_A 229 ---DFDEEYFSNT------SELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN 276 (283)
T ss_dssp ---CCCHHHHTTC------CHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCC
T ss_pred ---CCcchhcccC------CHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHh
Confidence 1111111111 124667889999999999999999997 556554443
No 139
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.1e-37 Score=342.32 Aligned_cols=251 Identities=25% Similarity=0.359 Sum_probs=207.7
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC-ChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN-DIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
.++|+..+.||+|+||.||+|.+..+++.||+|++..... .....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 4678899999999999999999999999999999865432 334456677999999999999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
|||+++++|.+++.... .+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 94 ~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EECCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 99999999999886533 278999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCcc
Q 037197 856 HKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPS 935 (1009)
Q Consensus 856 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1009)
..........|++.|+|||...+..++.++||||||+++|+|++|+.||... ...+.......... .
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-----~~~~~~~~~~~~~~--------~ 233 (294)
T 2rku_A 167 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS-----CLKETYLRIKKNEY--------S 233 (294)
T ss_dssp STTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHTTCC--------C
T ss_pred cCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHhhccC--------C
Confidence 4444445567899999999998888999999999999999999999999732 22222222211111 1
Q ss_pred ccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 936 IAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 936 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
+..... ..+.+++.+|++.||++||++.|+++
T Consensus 234 ~~~~~~------~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 234 IPKHIN------PVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp CCTTSC------HHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CccccC------HHHHHHHHHHcccChhhCcCHHHHhh
Confidence 111111 24567889999999999999999987
No 140
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=5.5e-38 Score=354.45 Aligned_cols=253 Identities=23% Similarity=0.299 Sum_probs=194.0
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
.++|+..+.||+|+||.||+|++..+++.||||++..... ..+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT---SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc---ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 4578999999999999999999999999999999965432 2355679999999999999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCc--EEEcccccceec
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLE--ARIADFGLARMM 854 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~--~kl~DfGls~~~ 854 (1009)
||+++|+|.+++..... +++..+..++.|+++||+|||++ +|+||||||+||+++.++. +||+|||+++..
T Consensus 96 e~~~~~~L~~~l~~~~~----~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~ 168 (361)
T 3uc3_A 96 EYASGGELYERICNAGR----FSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168 (361)
T ss_dssp ECCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred EeCCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence 99999999999865332 78999999999999999999999 9999999999999987765 999999999754
Q ss_pred ccCCCceeeecccCcccCCcccCCCCCCcc-cchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccC
Q 037197 855 LHKNETVSMVAGSYGYIAPEYGYTLKVDEK-SDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALD 933 (1009)
Q Consensus 855 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (1009)
... .......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||..... .......+..........
T Consensus 169 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~~~~~~~~~~~~~----- 241 (361)
T 3uc3_A 169 VLH-SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE-PRDYRKTIQRILSVKYSI----- 241 (361)
T ss_dssp -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC-----CCCHHHHHHHHHTTCCCC-----
T ss_pred ccc-CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCcc-HHHHHHHHHHHhcCCCCC-----
Confidence 222 23344579999999999887777655 8999999999999999999974322 223333333332221110
Q ss_pred ccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 934 PSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 934 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
+... .. ...+.+++.+|++.||++|||+.|+++
T Consensus 242 ~~~~-~~------s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 242 PDDI-RI------SPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp CTTS-CC------CHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CCcC-CC------CHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 0000 01 124567889999999999999999986
No 141
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=6.5e-38 Score=339.88 Aligned_cols=255 Identities=33% Similarity=0.489 Sum_probs=191.3
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCC--hhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDND--IESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
++|+..+.||+|+||.||+|.+. ++.||||++...... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 46788899999999999999986 788999998654322 22345677999999999999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCC--------CCcEEEcc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDA--------NLEARIAD 847 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~--------~~~~kl~D 847 (1009)
|||+++++|.+++... .+++..++.++.|+++||+|||+....+|+||||||+||+++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~~~-----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGK-----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHTSS-----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 9999999999999643 2788999999999999999999982122999999999999986 67899999
Q ss_pred cccceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccc
Q 037197 848 FGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKA 927 (1009)
Q Consensus 848 fGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 927 (1009)
||+++...... .....|++.|+|||...+..++.++||||||+++|||++|+.||.... ............
T Consensus 160 fg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~-- 230 (271)
T 3dtc_A 160 FGLAREWHRTT--KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID-----GLAVAYGVAMNK-- 230 (271)
T ss_dssp CCC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC-----HHHHHHHHHTSC--
T ss_pred CCccccccccc--ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHhhhcCC--
Confidence 99998654322 234568999999999888889999999999999999999999997321 111111111111
Q ss_pred cccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhc
Q 037197 928 QDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEA 978 (1009)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 978 (1009)
........++ ..+.+++.+|++.||++|||+.|+++.|+++
T Consensus 231 ----~~~~~~~~~~------~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 231 ----LALPIPSTCP------EPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ----CCCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ----CCCCCCcccC------HHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 1111111111 2466788999999999999999999999864
No 142
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.2e-37 Score=345.29 Aligned_cols=259 Identities=20% Similarity=0.285 Sum_probs=205.3
Q ss_pred HHHHhcCCcC-ceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCCe
Q 037197 694 SEILACVKES-NIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNETN 771 (1009)
Q Consensus 694 ~~~~~~~~~~-~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~ 771 (1009)
+.+.++|... +.||+|+||.||+|.+..+++.||+|++............+.+|+.+++++ +||||+++++++.+.+.
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~ 103 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE 103 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence 5677778877 899999999999999999999999999976555455567788999999999 56999999999999999
Q ss_pred EEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCC---CCcEEEccc
Q 037197 772 VMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDA---NLEARIADF 848 (1009)
Q Consensus 772 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~Df 848 (1009)
.++||||+++|+|.+++..... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 104 ~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Df 178 (327)
T 3lm5_A 104 IILILEYAAGGEIFSLCLPELA--EMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDF 178 (327)
T ss_dssp EEEEEECCTTEEGGGGGSSCC---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCG
T ss_pred EEEEEEecCCCcHHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeC
Confidence 9999999999999999865422 2378999999999999999999999 9999999999999988 789999999
Q ss_pred ccceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccc
Q 037197 849 GLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQ 928 (1009)
Q Consensus 849 Gls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 928 (1009)
|+++...... ......||+.|+|||++....++.++||||||+++|||++|+.||... +..............
T Consensus 179 g~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~~~i~~~~~~- 251 (327)
T 3lm5_A 179 GMSRKIGHAC-ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGE-----DNQETYLNISQVNVD- 251 (327)
T ss_dssp GGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCC-
T ss_pred ccccccCCcc-ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CchHHHHHHHhcccc-
Confidence 9998764332 234467999999999999889999999999999999999999999632 122222222211111
Q ss_pred ccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 929 DEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
......... ...+.+++.+|++.||++|||++|+++
T Consensus 252 ---~~~~~~~~~------~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 252 ---YSEETFSSV------SQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp ---CCTTTTTTS------CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---cCchhhccc------CHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 111111111 124567889999999999999999976
No 143
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.7e-38 Score=344.82 Aligned_cols=260 Identities=23% Similarity=0.365 Sum_probs=196.8
Q ss_pred HhcCCcCceeccCCceEEEEEEECC---CCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHR---PHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 773 (1009)
.++|+..+.||+|+||.||+|.+.. .+..||+|++... ......+.+.+|+.++++++||||+++++++. ++..+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 4578889999999999999999865 3567999998653 23444566779999999999999999999985 45689
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
+||||+++++|.+++.... ..+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 92 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp EEEECCTTEEHHHHHHHTT---TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEEecCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccc
Confidence 9999999999999997543 2378999999999999999999999 999999999999999999999999999987
Q ss_pred cccCCC-ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccccc
Q 037197 854 MLHKNE-TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEA 931 (1009)
Q Consensus 854 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1009)
...... ......+++.|+|||......++.++||||||+++|||++ |..||..... .+....+ ..+..
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~--~~~~~~i----~~~~~---- 235 (281)
T 1mp8_A 166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVIGRI----ENGER---- 235 (281)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHH----HTTCC----
T ss_pred cCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH--HHHHHHH----HcCCC----
Confidence 644332 2233456789999999888889999999999999999997 9999974322 2222222 11110
Q ss_pred cCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 932 LDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
..+...++ ..+.+++.+|++.||++||++.|+++.|+++.+++
T Consensus 236 --~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 236 --LPMPPNCP------PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp --CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --CCCCCCCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 11111111 24567889999999999999999999999987554
No 144
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.8e-38 Score=356.59 Aligned_cols=264 Identities=25% Similarity=0.384 Sum_probs=211.6
Q ss_pred HhcCCcCceeccCCceEEEEEEECC-------CCeEEEEEEcccCCCChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEc
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHR-------PHMVVAVKKLWRSDNDIESGDDLFREVSLLGRL-RHRNIVRLLGYLHN 768 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~ 768 (1009)
.++|...+.||+|+||.||+|.+.. .+..||||++... .......++.+|+++++++ +||||+++++++.+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc-cCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 3568888999999999999999643 3468999999654 3344456777999999999 99999999999999
Q ss_pred CCeEEEEEeccCCCChhhhhcCCccc------------cccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEE
Q 037197 769 ETNVMMVYDYMPNDSLGEALHGKEAG------------KLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNIL 836 (1009)
Q Consensus 769 ~~~~~lV~E~~~~gsL~~~l~~~~~~------------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIl 836 (1009)
++..++||||+++|+|.+++...... ...+++.+++.|+.||++||+|||+. +|+||||||+||+
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEE
Confidence 99999999999999999999765321 23489999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccceecccCC--CceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCcc
Q 037197 837 LDANLEARIADFGLARMMLHKN--ETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKD 913 (1009)
Q Consensus 837 l~~~~~~kl~DfGls~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~ 913 (1009)
++.++.+||+|||+++...... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||... .
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~-----~ 298 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-----P 298 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-----C
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-----C
Confidence 9999999999999998764433 22233456789999999988899999999999999999999 99999732 2
Q ss_pred HHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 914 IVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
..+. ...+..+. .......+. .++.+++.+||+.||++||++.|+++.|+++....
T Consensus 299 ~~~~-~~~~~~~~------~~~~~~~~~------~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 299 VEEL-FKLLKEGH------RMDKPSNCT------NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp HHHH-HHHHHTTC------CCCCCSSCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HHHH-HHHHHcCC------CCCCCccCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 2222 22222221 111111111 24667889999999999999999999999886433
No 145
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.2e-38 Score=371.32 Aligned_cols=259 Identities=24% Similarity=0.360 Sum_probs=209.8
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEEe
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVYD 777 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~E 777 (1009)
..|+..+.||+|+||.||+|.+..++..||||++.... ...+.+.+|++++++++||||+++++++.+....++|||
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc---cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 45778889999999999999999889999999996542 345678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecccC
Q 037197 778 YMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLHK 857 (1009)
Q Consensus 778 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~ 857 (1009)
|+++|+|.++++.... ..+++..++.++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 297 ~~~~g~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 371 (495)
T 1opk_A 297 FMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371 (495)
T ss_dssp CCTTCBHHHHHHHSCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTC
T ss_pred ccCCCCHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCC
Confidence 9999999999975432 2378899999999999999999999 9999999999999999999999999999876432
Q ss_pred CC-ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccccccCcc
Q 037197 858 NE-TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPS 935 (1009)
Q Consensus 858 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1009)
.. ......+++.|+|||++....++.++|||||||++|||++ |+.||..... ..+.+. +..+. ...
T Consensus 372 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~--~~~~~~----~~~~~------~~~ 439 (495)
T 1opk_A 372 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYEL----LEKDY------RME 439 (495)
T ss_dssp CEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHH----HHTTC------CCC
T ss_pred ceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHH----HHcCC------CCC
Confidence 21 1122345678999999988889999999999999999999 9999974321 122222 22211 111
Q ss_pred ccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 936 IAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 936 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
....++ ..+.+++.+||+.||++||++.|+++.|+.+....
T Consensus 440 ~~~~~~------~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~ 480 (495)
T 1opk_A 440 RPEGCP------EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 480 (495)
T ss_dssp CCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSS
T ss_pred CCCCCC------HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhcc
Confidence 111121 24567889999999999999999999999986543
No 146
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=8.8e-38 Score=340.37 Aligned_cols=249 Identities=29% Similarity=0.432 Sum_probs=199.3
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCC-hhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDND-IESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
.++|+..+.||+|+||.||+|.+..+++.||+|++...... ......+.+|++++++++||||+++++++.+....++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 35688899999999999999999999999999998543211 12234566899999999999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
|||+++++|.+++..... +++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 88 ~e~~~~~~l~~~l~~~~~----~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp ECCCTTEEHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred EecCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 999999999999865432 78899999999999999999998 99999999999999999999999999986542
Q ss_pred cCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCcc
Q 037197 856 HKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPS 935 (1009)
Q Consensus 856 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1009)
. .......|++.|+|||...+..++.++||||||+++|+|++|+.||... .............. .
T Consensus 161 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-----~~~~~~~~~~~~~~--------~ 225 (279)
T 3fdn_A 161 S--SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-----TYQETYKRISRVEF--------T 225 (279)
T ss_dssp ---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHHTCC--------C
T ss_pred c--ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCC-----cHHHHHHHHHhCCC--------C
Confidence 2 2234457899999999999888999999999999999999999999732 22222222211111 1
Q ss_pred ccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 936 IAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 936 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
+..... ..+.+++.+|++.||++||++.|+++
T Consensus 226 ~~~~~~------~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 226 FPDFVT------EGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp CCTTSC------HHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred CCCcCC------HHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111111 23567889999999999999999995
No 147
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.2e-37 Score=356.50 Aligned_cols=206 Identities=21% Similarity=0.289 Sum_probs=179.7
Q ss_pred HhcCCcCceeccC--CceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEE
Q 037197 697 LACVKESNIIGMG--GNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMM 774 (1009)
Q Consensus 697 ~~~~~~~~~iG~G--~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 774 (1009)
.++|+..+.||+| +||.||+|++..+++.||||++..........+.+.+|++++++++||||+++++++.+++..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3568999999999 99999999999999999999997665555555667789999999999999999999999999999
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceec
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMM 854 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~ 854 (1009)
||||+++|+|.+++...... .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 104 v~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMD--GMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEccCCCCHHHHHhhhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 99999999999999765322 278899999999999999999999 9999999999999999999999999998765
Q ss_pred ccCC-------CceeeecccCcccCCcccCC--CCCCcccchHhHHHHHHHHHhCCCCCCCC
Q 037197 855 LHKN-------ETVSMVAGSYGYIAPEYGYT--LKVDEKSDIYSFGVVLLELLTGKMPLDPA 907 (1009)
Q Consensus 855 ~~~~-------~~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~SlGvvl~elltg~~Pf~~~ 907 (1009)
.... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 240 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 240 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence 3322 11223468899999999877 67899999999999999999999999753
No 148
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3.4e-38 Score=367.24 Aligned_cols=251 Identities=20% Similarity=0.259 Sum_probs=196.0
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCC-CChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSD-NDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
.++|+..+.||+|+||.||+|.+..+++.||||++.... ........+.+|++++++++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 356889999999999999999999999999999986431 1223345566899999999999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHh-cCCCCeEEeccCCCcEEeCCCCcEEEcccccceec
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHH-DCQPPVIHRDIKSNNILLDANLEARIADFGLARMM 854 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~ 854 (1009)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+ . +|+||||||+||+++.++.+||+|||+++..
T Consensus 227 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 99999999999986543 27899999999999999999998 7 9999999999999999999999999999865
Q ss_pred ccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCc
Q 037197 855 LHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDP 934 (1009)
Q Consensus 855 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1009)
...........||+.|+|||++.+..++.++|||||||++|||++|+.||... +.............
T Consensus 300 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-----~~~~~~~~i~~~~~-------- 366 (446)
T 4ejn_A 300 IKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----DHEKLFELILMEEI-------- 366 (446)
T ss_dssp CC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCC--------
T ss_pred cCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCC-----CHHHHHHHHHhCCC--------
Confidence 44444555678999999999999899999999999999999999999999632 22222222222111
Q ss_pred cccccCchHHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 037197 935 SIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRP-----TMRDVIT 973 (1009)
Q Consensus 935 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RP-----s~~evl~ 973 (1009)
.+..... ..+.+++.+|++.||++|| ++.|+++
T Consensus 367 ~~p~~~~------~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 367 RFPRTLG------PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CCCTTSC------HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCCccCC------HHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 1111111 2456788999999999999 9999875
No 149
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-37 Score=342.05 Aligned_cols=257 Identities=27% Similarity=0.422 Sum_probs=197.1
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEEe
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVYD 777 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~E 777 (1009)
++|+..+.||+|+||.||+|++. ++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++|||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e 79 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVME 79 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEE
Confidence 45788899999999999999986 688999998532 345667799999999999999999998874 4789999
Q ss_pred ccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCc-EEEcccccceeccc
Q 037197 778 YMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLE-ARIADFGLARMMLH 856 (1009)
Q Consensus 778 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~-~kl~DfGls~~~~~ 856 (1009)
|+++|+|.++++.... ...+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++.....
T Consensus 80 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 80 YAEGGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp CCTTCBHHHHHHCSSS-EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred cCCCCCHHHHHhccCC-CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 9999999999976542 223678889999999999999999943239999999999999998886 79999999976532
Q ss_pred CCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCccc
Q 037197 857 KNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSI 936 (1009)
Q Consensus 857 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1009)
. .....||+.|+|||+..+..++.++||||||+++|||++|+.||...... ........ ..+. .+..
T Consensus 159 ~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~-~~~~------~~~~ 225 (307)
T 2eva_A 159 H---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP---AFRIMWAV-HNGT------RPPL 225 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS---HHHHHHHH-HTTC------CCCC
T ss_pred c---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc---HHHHHHHH-hcCC------CCCc
Confidence 2 23346899999999999889999999999999999999999999743222 11111111 1111 1111
Q ss_pred cccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 937 AGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 937 ~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
....+ ..+.+++.+|++.||++|||+.|+++.|+.+...-
T Consensus 226 ~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 226 IKNLP------KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp BTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred ccccC------HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 11221 23567889999999999999999999999886543
No 150
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.3e-37 Score=348.29 Aligned_cols=251 Identities=25% Similarity=0.359 Sum_probs=207.8
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC-ChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN-DIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
.++|...+.||+|+||.||++.+..+++.||+|++..... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 4568889999999999999999999999999999865432 334456677999999999999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
|||+++++|.+++.... .+++.+++.++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 120 ~e~~~~~~L~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp ECCCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 99999999999986533 278999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCcc
Q 037197 856 HKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPS 935 (1009)
Q Consensus 856 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1009)
..........|++.|+|||++.+..++.++||||||+++|||++|+.||... ...+.......... .
T Consensus 193 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----~~~~~~~~~~~~~~--------~ 259 (335)
T 2owb_A 193 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS-----CLKETYLRIKKNEY--------S 259 (335)
T ss_dssp STTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHHTCC--------C
T ss_pred cCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCC-----CHHHHHHHHhcCCC--------C
Confidence 4444455567999999999998888999999999999999999999999732 22222222221111 1
Q ss_pred ccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 936 IAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 936 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
+..... ..+.+++.+|++.||++||++.|+++
T Consensus 260 ~~~~~~------~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 260 IPKHIN------PVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp CCTTSC------HHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CCccCC------HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111111 23567889999999999999999987
No 151
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=5.4e-38 Score=346.35 Aligned_cols=263 Identities=25% Similarity=0.350 Sum_probs=204.4
Q ss_pred hcCCcCceeccCCceEEEEEE----ECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcC--Ce
Q 037197 698 ACVKESNIIGMGGNGIVYKAE----FHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNE--TN 771 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~--~~ 771 (1009)
+.|+..+.||+|+||.||+|. ...+++.||+|++.... .....+.+.+|++++++++||||+++++++.+. ..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 457888999999999999999 45678999999996543 233456777999999999999999999999876 66
Q ss_pred EEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccc
Q 037197 772 VMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLA 851 (1009)
Q Consensus 772 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls 851 (1009)
.++||||+++++|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNKN---KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 173 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHTT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred EEEEEEeCCCCcHHHHHHhccc---cCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccc
Confidence 8999999999999999954332 278999999999999999999999 9999999999999999999999999999
Q ss_pred eecccCCC---ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCC---------CCCccHHHHHH
Q 037197 852 RMMLHKNE---TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAF---------GGSKDIVEWVL 919 (1009)
Q Consensus 852 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~---------~~~~~~~~~~~ 919 (1009)
........ ......+|+.|+|||...+..++.++||||+|+++|||++|+.|+.... .........+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 4e5w_A 174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV 253 (302)
T ss_dssp EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH
T ss_pred ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH
Confidence 87654432 2233457788999999988889999999999999999999999864210 01111111222
Q ss_pred HHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcC
Q 037197 920 SMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAK 979 (1009)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 979 (1009)
.....+. ........+ ..+.+++.+|++.||++|||+.|+++.|+++.
T Consensus 254 ~~~~~~~------~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 254 NTLKEGK------RLPCPPNCP------DEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHTTC------CCCCCTTCC------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHhccC------CCCCCCCCC------HHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 2222211 111111111 24667899999999999999999999998864
No 152
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=6e-38 Score=360.71 Aligned_cols=257 Identities=21% Similarity=0.233 Sum_probs=202.8
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCC-hhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDND-IESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
.++|+..++||+|+||+||+|+++.+++.||+|++.+.... ......+.+|+.+++.++||||++++++|.+++..|+|
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV 152 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV 152 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEE
Confidence 46799999999999999999999999999999998542111 11123366899999999999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
|||+++|+|.++++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 153 ~Ey~~gg~L~~~l~~~~~---~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~~ 226 (437)
T 4aw2_A 153 MDYYVGGDLLTLLSKFED---RLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLM 226 (437)
T ss_dssp ECCCTTCBHHHHHHTTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHHHccC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhcc
Confidence 999999999999976322 278899999999999999999999 99999999999999999999999999998764
Q ss_pred cCCC-ceeeecccCcccCCcccC-----CCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccc
Q 037197 856 HKNE-TVSMVAGSYGYIAPEYGY-----TLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQD 929 (1009)
Q Consensus 856 ~~~~-~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (1009)
.... ......||+.|+|||++. ...++.++|||||||++|||++|+.||... +..+..........
T Consensus 227 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~-----~~~~~~~~i~~~~~--- 298 (437)
T 4aw2_A 227 EDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE-----SLVETYGKIMNHKE--- 298 (437)
T ss_dssp TTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHTHHH---
T ss_pred cCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC-----ChhHHHHhhhhccc---
Confidence 4433 233467999999999876 567899999999999999999999999732 22222222221110
Q ss_pred cccCccccccCchHHHHHHHHHHHHHHhccCCCCC--CCCHHHHHH
Q 037197 930 EALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKG--RPTMRDVIT 973 (1009)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~--RPs~~evl~ 973 (1009)
....|...... . .++.+++.+|+..+|++ ||++.|+++
T Consensus 299 ~~~~p~~~~~~---s---~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 299 RFQFPTQVTDV---S---ENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HCCCCSSCCCS---C---HHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred cccCCcccccC---C---HHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 00111111111 1 23557888999988888 999999986
No 153
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.4e-37 Score=347.74 Aligned_cols=268 Identities=24% Similarity=0.353 Sum_probs=202.3
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
.++|+..+.||+|+||.||+|.+..+++.||||++..........+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 46789999999999999999999999999999999766555555666779999999999999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
||+++++|.++...... +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 104 e~~~~~~l~~~~~~~~~----~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 104 EFVDHTILDDLELFPNG----LDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp ECCSEEHHHHHHHSTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred ecCCcchHHHHHhhccC----CCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 99999999988754432 78999999999999999999999 999999999999999999999999999987655
Q ss_pred CCCceeeecccCcccCCcccCCC-CCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHH-----------Hhh
Q 037197 857 KNETVSMVAGSYGYIAPEYGYTL-KVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSM-----------IKS 924 (1009)
Q Consensus 857 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~-----------~~~ 924 (1009)
.........+++.|+|||++.+. .++.++||||+|+++|||++|+.||..... .+....+... ...
T Consensus 177 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 254 (331)
T 4aaa_A 177 PGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD--IDQLYHIMMCLGNLIPRHQELFNK 254 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCSCCHHHHHHHHH
T ss_pred CccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHHHhCCCChhhhhHhhh
Confidence 54455556789999999988765 689999999999999999999999974211 1111111110 000
Q ss_pred ccccccccCccccccCch---HHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 925 NKAQDEALDPSIAGQCKH---VQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~---~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.........+.+...... .......+.+++.+|++.||++|||+.|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 255 NPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000111111111111000 0011235678899999999999999999875
No 154
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=6.6e-38 Score=365.26 Aligned_cols=257 Identities=25% Similarity=0.407 Sum_probs=205.7
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEEe
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVYD 777 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~E 777 (1009)
+.|+..+.||+|+||.||+|.+.. +..||||+++.. ....+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 188 ~~~~~~~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 188 ESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPG---SMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETT-TEEEEEEEECTT---SBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred HHeEEEEEcccCCceEEEEEEECC-ccEEEEEEecCC---CccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 457788899999999999999976 788999999653 234567889999999999999999999986 567899999
Q ss_pred ccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecccC
Q 037197 778 YMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLHK 857 (1009)
Q Consensus 778 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~ 857 (1009)
|+++|+|.++++.... ..+++..++.++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 263 ~~~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~ 337 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEG--SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDN 337 (454)
T ss_dssp CCTTCBHHHHHHSHHH--HTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH
T ss_pred ecCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC
Confidence 9999999999975432 2368888999999999999999999 9999999999999999999999999999865332
Q ss_pred CC-ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccccccCcc
Q 037197 858 NE-TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPS 935 (1009)
Q Consensus 858 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1009)
.. ......+++.|+|||++....++.++|||||||++|||++ |+.||... ...+... .+..+.. ..
T Consensus 338 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~-----~~~~~~~-~i~~~~~------~~ 405 (454)
T 1qcf_A 338 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM-----SNPEVIR-ALERGYR------MP 405 (454)
T ss_dssp HHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-----CHHHHHH-HHHHTCC------CC
T ss_pred ceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC-----CHHHHHH-HHHcCCC------CC
Confidence 21 1223345778999999988889999999999999999999 99999732 1222222 2222211 11
Q ss_pred ccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 936 IAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 936 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
....++ ..+.+++.+||+.||++|||+.++++.|+++....
T Consensus 406 ~~~~~~------~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 406 RPENCP------EELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp CCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred CCCCCC------HHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 111111 24667889999999999999999999999987543
No 155
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=9.5e-38 Score=362.72 Aligned_cols=249 Identities=28% Similarity=0.394 Sum_probs=203.3
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCC-hhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDND-IESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
+.|...+.||+|+||.||+|.+..+|+.||||++...... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 5688899999999999999999999999999998543211 123456779999999999999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
||+++|+|.+++..... +++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 96 E~~~gg~L~~~l~~~~~----l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 96 EYVSGGELFDYICKNGR----LDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp ECCSSEEHHHHTTSSSS----CCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred eCCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 99999999999975432 78999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCceeeecccCcccCCcccCCCCC-CcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCcc
Q 037197 857 KNETVSMVAGSYGYIAPEYGYTLKV-DEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPS 935 (1009)
Q Consensus 857 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1009)
. .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||+... ........ ..+.. ..+
T Consensus 169 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~-----~~~~~~~i-~~~~~----~~p- 236 (476)
T 2y94_A 169 G-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH-----VPTLFKKI-CDGIF----YTP- 236 (476)
T ss_dssp T-CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----SHHHHHHH-HTTCC----CCC-
T ss_pred c-ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC-----HHHHHHHH-hcCCc----CCC-
Confidence 3 33445679999999999887765 689999999999999999999997421 22222222 21110 011
Q ss_pred ccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 936 IAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 936 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.... ..+.+++.+|++.||++|||+.|+++
T Consensus 237 --~~~s------~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 237 --QYLN------PSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp --TTCC------HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --ccCC------HHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 1111 24567889999999999999999987
No 156
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=5.5e-38 Score=348.18 Aligned_cols=263 Identities=26% Similarity=0.355 Sum_probs=210.7
Q ss_pred HhcCCcCceeccCCceEEEEEEE-----CCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCC
Q 037197 697 LACVKESNIIGMGGNGIVYKAEF-----HRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNET 770 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~ 770 (1009)
.++|+..+.||+|+||.||+|.+ ..+++.||||++.... .....+.+.+|+++++++ +||||+++++++.+++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 35688899999999999999985 4567899999996543 334456777999999999 9999999999999999
Q ss_pred eEEEEEeccCCCChhhhhcCCccc--------------cccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEE
Q 037197 771 NVMMVYDYMPNDSLGEALHGKEAG--------------KLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNIL 836 (1009)
Q Consensus 771 ~~~lV~E~~~~gsL~~~l~~~~~~--------------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIl 836 (1009)
..++||||+++|+|.+++...... ...+++.+++.++.|+++||+|||+. +|+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEE
Confidence 999999999999999999765321 22478999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccceecccCCCc--eeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCcc
Q 037197 837 LDANLEARIADFGLARMMLHKNET--VSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKD 913 (1009)
Q Consensus 837 l~~~~~~kl~DfGls~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~ 913 (1009)
++.++.+||+|||++......... .....+++.|+|||...+..++.++||||||+++|||++ |+.||...... .
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~- 255 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-S- 255 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS-H-
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch-h-
Confidence 999999999999999876544321 223456789999999888889999999999999999999 99999743221 1
Q ss_pred HHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCC
Q 037197 914 IVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKP 980 (1009)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 980 (1009)
.+........ .+......+ ..+.+++.+|++.||++||++.|+++.|+++..
T Consensus 256 ---~~~~~~~~~~------~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 307 (313)
T 1t46_A 256 ---KFYKMIKEGF------RMLSPEHAP------AEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (313)
T ss_dssp ---HHHHHHHHTC------CCCCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---HHHHHhccCC------CCCCcccCC------HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 1222222221 111111111 246678899999999999999999999998764
No 157
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.2e-37 Score=365.58 Aligned_cols=253 Identities=21% Similarity=0.275 Sum_probs=204.8
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCC-hhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDND-IESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
+.|+..+.||+|+||.||+|+++.+++.||+|++.+.... ......+.+|++++++++||||+++++++.+....|+||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 5688889999999999999999999999999999643211 122456779999999999999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
||+++|+|.+++.........+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 99999999999976554344589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCccc
Q 037197 857 KNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSI 936 (1009)
Q Consensus 857 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1009)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....+...... .... .+
T Consensus 342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~-~~~~~~~~~i~-~~~~-------~~ 412 (543)
T 3c4z_A 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVL-EQAV-------TY 412 (543)
T ss_dssp TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC-CCHHHHHHHHH-HCCC-------CC
T ss_pred CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc-hhHHHHHHHHh-hccc-------CC
Confidence 444444568999999999999989999999999999999999999999753221 12222222222 1110 11
Q ss_pred cccCchHHHHHHHHHHHHHHhccCCCCCCCCH
Q 037197 937 AGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTM 968 (1009)
Q Consensus 937 ~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~ 968 (1009)
....+ ..+..++.+|++.||++||++
T Consensus 413 p~~~s------~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 413 PDKFS------PASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp CTTSC------HHHHHHHHHHSCSSGGGSCCC
T ss_pred CcccC------HHHHHHHHHhccCCHhHCCCC
Confidence 11111 245678889999999999975
No 158
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2.6e-38 Score=354.03 Aligned_cols=264 Identities=25% Similarity=0.370 Sum_probs=209.7
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCC-----eEEEEEEcccCCCChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCC
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPH-----MVVAVKKLWRSDNDIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNET 770 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~ 770 (1009)
.+.|+..+.||+|+||.||+|.+..++ ..||+|.+.... .....+.+.+|+++++++ +||||+++++++.+++
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 456888999999999999999987655 479999986542 334456677999999999 8999999999999999
Q ss_pred eEEEEEeccCCCChhhhhcCCcc----------ccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCC
Q 037197 771 NVMMVYDYMPNDSLGEALHGKEA----------GKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDAN 840 (1009)
Q Consensus 771 ~~~lV~E~~~~gsL~~~l~~~~~----------~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~ 840 (1009)
..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCC
Confidence 99999999999999999975321 022368899999999999999999999 99999999999999999
Q ss_pred CcEEEcccccceecccCCC--ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHH
Q 037197 841 LEARIADFGLARMMLHKNE--TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEW 917 (1009)
Q Consensus 841 ~~~kl~DfGls~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~ 917 (1009)
+.+||+|||+++....... ......+|+.|+|||...+..++.++||||||+++|||++ |..||...... . .
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~----~ 275 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN-S----K 275 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS-H----H
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh-H----H
Confidence 9999999999987644332 1223456789999999888889999999999999999999 99999743221 1 1
Q ss_pred HHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCC
Q 037197 918 VLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPR 981 (1009)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~ 981 (1009)
+......+. ........+ ..+..++.+|++.||++||++.|+++.|+++...
T Consensus 276 ~~~~~~~~~------~~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 276 FYKLVKDGY------QMAQPAFAP------KNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp HHHHHHHTC------CCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCC------CCCCCCCCC------HHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 122222221 111111111 2456788999999999999999999999987653
No 159
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=6e-38 Score=349.32 Aligned_cols=271 Identities=21% Similarity=0.315 Sum_probs=197.3
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEEe
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVYD 777 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~E 777 (1009)
++|+..+.||+|+||.||+|.+..+++.||+|++..... ......+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc-cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 468888999999999999999999999999999854322 1112234479999999999999999999999999999999
Q ss_pred ccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecccC
Q 037197 778 YMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLHK 857 (1009)
Q Consensus 778 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~ 857 (1009)
|++ |+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~~-~~l~~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 81 YLD-KDLKQYLDDCGN---IINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp CCS-EEHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred ccc-cCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 997 589888865432 378889999999999999999999 9999999999999999999999999999876544
Q ss_pred CCceeeecccCcccCCcccCC-CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCccc
Q 037197 858 NETVSMVAGSYGYIAPEYGYT-LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSI 936 (1009)
Q Consensus 858 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1009)
........+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.... ..+....+...... ...+......
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~~--~~~~~~~~~~ 229 (324)
T 3mtl_A 154 TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST--VEEQLHFIFRILGT--PTEETWPGIL 229 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCC--CCTTTSTTGG
T ss_pred ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCC--CChHhchhhh
Confidence 444555678999999998765 568999999999999999999999997421 11222222222111 1111111000
Q ss_pred cc-----------cCch----HHHHHHHHHHHHHHhccCCCCCCCCHHHHHH--HHhhcCC
Q 037197 937 AG-----------QCKH----VQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT--MLGEAKP 980 (1009)
Q Consensus 937 ~~-----------~~~~----~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~--~L~~~~~ 980 (1009)
.. .... .......+.+++.+|++.||++|||++|+++ .+..+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 290 (324)
T 3mtl_A 230 SNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE 290 (324)
T ss_dssp GCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCS
T ss_pred cchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccc
Confidence 00 0000 0011234568899999999999999999987 4555443
No 160
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3.3e-37 Score=363.60 Aligned_cols=255 Identities=24% Similarity=0.342 Sum_probs=200.7
Q ss_pred HHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEE
Q 037197 695 EILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMM 774 (1009)
Q Consensus 695 ~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 774 (1009)
.+.+.|+..+.||+|+||.||+|.+..+++.||+|++.+..........+.+|++++++++||||+++++++.+....++
T Consensus 34 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 113 (494)
T 3lij_A 34 HLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYL 113 (494)
T ss_dssp CHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred chhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 46678999999999999999999999999999999997665444455677899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCC---CcEEEcccccc
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDAN---LEARIADFGLA 851 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~---~~~kl~DfGls 851 (1009)
||||+++|+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+||+++.. +.+||+|||++
T Consensus 114 v~e~~~~g~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a 186 (494)
T 3lij_A 114 VMECYKGGELFDEIIHRM----KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLS 186 (494)
T ss_dssp EEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCC
Confidence 999999999999886543 278899999999999999999999 99999999999999764 45999999999
Q ss_pred eecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccc
Q 037197 852 RMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEA 931 (1009)
Q Consensus 852 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1009)
...... .......||+.|+|||++. ..++.++||||+||++|+|++|+.||... ...+........... .
T Consensus 187 ~~~~~~-~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~~~i~~~~~~---~ 256 (494)
T 3lij_A 187 AVFENQ-KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQ-----TDQEILRKVEKGKYT---F 256 (494)
T ss_dssp EECBTT-BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCC---C
T ss_pred eECCCC-ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCC---C
Confidence 876433 2334567999999999876 56899999999999999999999999732 222222222221111 1
Q ss_pred cCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 932 LDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
..+... .. ...+.+++.+|++.||++|||+.|+++
T Consensus 257 ~~~~~~-~~------s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 257 DSPEWK-NV------SEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp CSGGGT-TS------CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred Cchhcc-cC------CHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 111111 11 124567889999999999999999874
No 161
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=7.5e-38 Score=349.26 Aligned_cols=270 Identities=25% Similarity=0.333 Sum_probs=206.2
Q ss_pred hcCCcCceeccCCceEEEEEE----ECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEE--cCCe
Q 037197 698 ACVKESNIIGMGGNGIVYKAE----FHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLH--NETN 771 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~--~~~~ 771 (1009)
++|+..+.||+|+||.||+|+ ...+++.||||++... .....+.+.+|++++++++||||+++++++. +...
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 568889999999999999999 4567899999998654 3444566779999999999999999999886 4567
Q ss_pred EEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccc
Q 037197 772 VMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLA 851 (1009)
Q Consensus 772 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls 851 (1009)
.++||||+++++|.+++..... .+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 174 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRHRA---RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLA 174 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGC
T ss_pred EEEEEeecCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccc
Confidence 8999999999999999975332 378999999999999999999998 9999999999999999999999999999
Q ss_pred eecccCCC---ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCC---------CCccHHHHHH
Q 037197 852 RMMLHKNE---TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFG---------GSKDIVEWVL 919 (1009)
Q Consensus 852 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~---------~~~~~~~~~~ 919 (1009)
+....... ......+|+.|+|||+..+..++.++||||||+++|+|++|+.||..... ........+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (327)
T 3lxl_A 175 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLL 254 (327)
T ss_dssp EECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHH
T ss_pred eecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHH
Confidence 87644332 12234577889999998888899999999999999999999999863110 0001111112
Q ss_pred HHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCcccccc
Q 037197 920 SMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRRKSICQ 987 (1009)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~~~~~~ 987 (1009)
.....+. .......+ ...+.+++.+|++.||++|||+.|+++.|+.+.........
T Consensus 255 ~~~~~~~------~~~~~~~~------~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~ 310 (327)
T 3lxl_A 255 ELLEEGQ------RLPAPPAC------PAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCET 310 (327)
T ss_dssp HHHHTTC------CCCCCTTC------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---------
T ss_pred HHhhccc------CCCCCCcc------cHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCccc
Confidence 2221111 11111111 12466788999999999999999999999999876655443
No 162
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.5e-37 Score=347.04 Aligned_cols=251 Identities=29% Similarity=0.399 Sum_probs=201.1
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCC-hhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEE
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDND-IESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMM 774 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 774 (1009)
..+.|+..+.||+|+||.||+|.+..+++.||||++...... ....+.+.+|++++++++||||+++++++.+++..++
T Consensus 52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 131 (348)
T 1u5q_A 52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL 131 (348)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEE
Confidence 456688899999999999999999989999999999655332 3334567799999999999999999999999999999
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceec
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMM 854 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~ 854 (1009)
||||+. |++.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 132 v~e~~~-g~l~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 204 (348)
T 1u5q_A 132 VMEYCL-GSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIM 204 (348)
T ss_dssp EEECCS-EEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSS
T ss_pred EEecCC-CCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceec
Confidence 999997 67888875332 2378999999999999999999999 9999999999999999999999999999765
Q ss_pred ccCCCceeeecccCcccCCcccC---CCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccc
Q 037197 855 LHKNETVSMVAGSYGYIAPEYGY---TLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEA 931 (1009)
Q Consensus 855 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1009)
... ....||+.|+|||++. ...++.++|||||||++|||++|+.||... .....+......... ..
T Consensus 205 ~~~----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~-----~~~~~~~~~~~~~~~--~~ 273 (348)
T 1u5q_A 205 APA----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-----NAMSALYHIAQNESP--AL 273 (348)
T ss_dssp SSB----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHHHHHHHSCCC--CC
T ss_pred CCC----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHHhcCCC--CC
Confidence 322 3456899999999873 567899999999999999999999999632 222222222222110 01
Q ss_pred cCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 037197 932 LDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITM 974 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 974 (1009)
. ....+ ..+.+++.+||+.||++|||+.|+++.
T Consensus 274 ~----~~~~~------~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 274 Q----SGHWS------EYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp C----CTTSC------HHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred C----CCCCC------HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1 11111 235678889999999999999998753
No 163
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=6.3e-37 Score=333.03 Aligned_cols=254 Identities=24% Similarity=0.354 Sum_probs=204.9
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
+.++|+..+.||+|+||.||+|.+..+++.||||++..... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence 46789999999999999999999998899999999864432 23346677999999999999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
|||+++++|.+++.... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 84 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 156 (276)
T 2yex_A 84 LEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (276)
T ss_dssp EECCTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEecCCCcHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccC
Confidence 99999999999997543 278899999999999999999999 99999999999999999999999999998764
Q ss_pred cCC--CceeeecccCcccCCcccCCCCC-CcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccccc
Q 037197 856 HKN--ETVSMVAGSYGYIAPEYGYTLKV-DEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEAL 932 (1009)
Q Consensus 856 ~~~--~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1009)
... .......|++.|+|||...+..+ +.++||||||+++|||++|+.||............+. ... ...
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----~~~---~~~ 228 (276)
T 2yex_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK-----EKK---TYL 228 (276)
T ss_dssp ETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHH-----TTC---TTS
T ss_pred CCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhh-----hcc---ccc
Confidence 332 22344578999999999887665 7899999999999999999999975433222222221 111 000
Q ss_pred CccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 933 DPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 933 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
. .. ... ...+.+++.+|++.||++|||+.|+++
T Consensus 229 ~-~~----~~~---~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 229 N-PW----KKI---DSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp T-TG----GGS---CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred C-ch----hhc---CHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 1 00 111 124567889999999999999999875
No 164
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.1e-37 Score=346.62 Aligned_cols=263 Identities=25% Similarity=0.388 Sum_probs=208.9
Q ss_pred HhcCCcCceeccCCceEEEEEEEC-------CCCeEEEEEEcccCCCChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEc
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFH-------RPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRL-RHRNIVRLLGYLHN 768 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~-------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~ 768 (1009)
.++|+..+.||+|+||.||+|.+. .+++.||||++.... .......+.+|+++++++ +||||+++++++.+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 356888999999999999999975 356789999996542 334456777999999999 89999999999999
Q ss_pred CCeEEEEEeccCCCChhhhhcCCccc------------cccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEE
Q 037197 769 ETNVMMVYDYMPNDSLGEALHGKEAG------------KLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNIL 836 (1009)
Q Consensus 769 ~~~~~lV~E~~~~gsL~~~l~~~~~~------------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIl 836 (1009)
.+..++||||+++|+|.+++...... ...+++..++.++.||++||+|||+. +|+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEE
Confidence 99999999999999999999765421 12378899999999999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccceecccCCC--ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCcc
Q 037197 837 LDANLEARIADFGLARMMLHKNE--TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKD 913 (1009)
Q Consensus 837 l~~~~~~kl~DfGls~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~ 913 (1009)
++.++.+||+|||+++....... ......+++.|+|||+..+..++.++||||||+++|||++ |+.||... .
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~-----~ 264 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-----P 264 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC-----C
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC-----C
Confidence 99999999999999987654332 1223456788999999888889999999999999999999 99999632 1
Q ss_pred HHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCC
Q 037197 914 IVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPR 981 (1009)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~ 981 (1009)
..+.. ..+..+.. ......+. ..+.+++.+|++.||++||++.|+++.|+++...
T Consensus 265 ~~~~~-~~~~~~~~------~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~ 319 (334)
T 2pvf_A 265 VEELF-KLLKEGHR------MDKPANCT------NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319 (334)
T ss_dssp HHHHH-HHHHHTCC------CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHhcCCC------CCCCccCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 22222 22222211 11111111 2466788999999999999999999999998653
No 165
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.5e-37 Score=340.82 Aligned_cols=259 Identities=24% Similarity=0.335 Sum_probs=203.6
Q ss_pred hcCCcCc-eeccCCceEEEEEEE--CCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEE
Q 037197 698 ACVKESN-IIGMGGNGIVYKAEF--HRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMM 774 (1009)
Q Consensus 698 ~~~~~~~-~iG~G~~g~Vyk~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 774 (1009)
++|+..+ .||+|+||.||+|.+ ..+++.||||++.....+....+.+.+|++++++++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4567777 899999999999954 56678999999976554445567778999999999999999999999 5567899
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceec
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMM 854 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~ 854 (1009)
||||+++++|.+++..... +++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 95 v~e~~~~~~L~~~l~~~~~----~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQNRH----VKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167 (291)
T ss_dssp EEECCTTEEHHHHHHHCTT----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEeCCCCCHHHHHHhCcC----CCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence 9999999999999976432 78899999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCCc---eeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhcccccc
Q 037197 855 LHKNET---VSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDE 930 (1009)
Q Consensus 855 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1009)
...... .....+++.|+|||......++.++||||||+++|||++ |+.||.... .. .+...+..+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~-~~~~~~~~~~---- 237 (291)
T 1xbb_A 168 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-----GS-EVTAMLEKGE---- 237 (291)
T ss_dssp CTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HH-HHHHHHHTTC----
T ss_pred ccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC-----HH-HHHHHHHcCC----
Confidence 444322 122345688999999888889999999999999999999 999997421 11 1222222221
Q ss_pred ccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 931 ALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
.+.....++ ..+.+++.+|++.||++||++.|+++.|+++....
T Consensus 238 --~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 238 --RMGCPAGCP------REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp --CCCCCTTCC------HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred --CCCCCCCCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 111111111 24667889999999999999999999999886443
No 166
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-37 Score=347.01 Aligned_cols=262 Identities=28% Similarity=0.462 Sum_probs=202.3
Q ss_pred hcCCcCceeccCCceEEEEEEECCC----CeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRP----HMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 773 (1009)
.+|+..+.||+|+||.||+|.+..+ +..||||++.... .......+.+|++++++++||||+++++++.+.+..+
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 4577788999999999999987654 3569999986432 3444566779999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
+||||+++|+|.+++..... .+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 123 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 123 IITEYMENGALDKFLREKDG---EFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEEECCTTEEHHHHHHHTTT---CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEEeCCCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 99999999999999975422 378999999999999999999999 999999999999999999999999999987
Q ss_pred cccCCC---ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccc
Q 037197 854 MLHKNE---TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQD 929 (1009)
Q Consensus 854 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (1009)
...... ......+++.|+|||......++.++||||||+++|||++ |+.||.... ..+. ...+..+..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~-----~~~~-~~~~~~~~~-- 268 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS-----NHEV-MKAINDGFR-- 268 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHH-HHHHHTTCC--
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC-----HHHH-HHHHHCCCc--
Confidence 644322 1222345778999999988889999999999999999999 999996321 1122 222222211
Q ss_pred cccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCccc
Q 037197 930 EALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRRKS 984 (1009)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~~~ 984 (1009)
......+. ..+.+++.+||+.||++||++.|+++.|+++......
T Consensus 269 ----~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 313 (333)
T 1mqb_A 269 ----LPTPMDCP------SAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 313 (333)
T ss_dssp ----CCCCTTCB------HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred ----CCCcccCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence 01111111 2456788999999999999999999999998765444
No 167
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.8e-37 Score=342.71 Aligned_cols=269 Identities=26% Similarity=0.381 Sum_probs=204.5
Q ss_pred HHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhcc--CCCceeeEEeEEEcC---
Q 037197 695 EILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRL--RHRNIVRLLGYLHNE--- 769 (1009)
Q Consensus 695 ~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l--~Hpniv~l~~~~~~~--- 769 (1009)
.+.++|+..+.||+|+||.||+|++. ++.||||++... ......+|.+++... +||||+++++++.+.
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 106 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTT-----EEASWFRETEIYQTVLMRHENILGFIAADIKGTGS 106 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecc-----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence 45678999999999999999999986 789999998432 234445666666554 899999999999877
Q ss_pred -CeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcC-----CCCeEEeccCCCcEEeCCCCcE
Q 037197 770 -TNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDC-----QPPVIHRDIKSNNILLDANLEA 843 (1009)
Q Consensus 770 -~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~dlk~~NIll~~~~~~ 843 (1009)
...++||||+++|+|.++++... +++..++.++.|++.||+|||+.+ .++|+||||||+||+++.++.+
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLKSTT-----LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred CCceEEEEeccCCCcHHHHhhccC-----CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCE
Confidence 78999999999999999996542 789999999999999999999752 3489999999999999999999
Q ss_pred EEcccccceecccCCCc----eeeecccCcccCCcccCCCCCCcc------cchHhHHHHHHHHHhC----------CCC
Q 037197 844 RIADFGLARMMLHKNET----VSMVAGSYGYIAPEYGYTLKVDEK------SDIYSFGVVLLELLTG----------KMP 903 (1009)
Q Consensus 844 kl~DfGls~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~------sDv~SlGvvl~elltg----------~~P 903 (1009)
||+|||+++.+...... .....||+.|+|||++.+...+.+ +|||||||++|||++| +.|
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p 261 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence 99999999876443322 124578999999999877666554 9999999999999999 666
Q ss_pred CCCCCCCCccHHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 904 LDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 904 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
|............. ....... ...+.+..... ......++.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 262 ~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 262 YHDLVPSDPSYEDM-REIVCIK-----KLRPSFPNRWS-SDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp TTTTSCSSCCHHHH-HHHHTTS-----CCCCCCCGGGG-GSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred HhhhcCCCCchhhh-HHHHhhh-----ccCccccccch-hhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 65443333222222 2222111 11222221111 1133445778999999999999999999999999986543
No 168
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.4e-37 Score=336.44 Aligned_cols=256 Identities=24% Similarity=0.392 Sum_probs=206.5
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEEe
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVYD 777 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~E 777 (1009)
++|+..+.||+|+||.||+|.+.. ++.||+|++.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGA---MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTE 83 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETT-TEEEEEEEECTTT---BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEC
T ss_pred hheeeeeEecCCCceeEEEEEecC-CCeEEEEEccccC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEe
Confidence 467888999999999999999975 7889999996543 234567799999999999999999999999999999999
Q ss_pred ccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecccC
Q 037197 778 YMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLHK 857 (1009)
Q Consensus 778 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~ 857 (1009)
|+++++|.+++..... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 84 FMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CCTTCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred CCCCCcHHHHHhhCcc---cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 9999999999975432 378899999999999999999999 9999999999999999999999999999765332
Q ss_pred C-CceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccccccCcc
Q 037197 858 N-ETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPS 935 (1009)
Q Consensus 858 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1009)
. .......+++.|+|||......++.++||||||+++|||++ |+.||... ...+.... +..+. ...
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-----~~~~~~~~-i~~~~------~~~ 225 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR-----SNSEVVED-ISTGF------RLY 225 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHH-HHTTC------CCC
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC-----CHHHHHHH-HhcCC------cCC
Confidence 1 11223456778999999888889999999999999999999 89999732 22222222 22211 011
Q ss_pred ccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCC
Q 037197 936 IAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPR 981 (1009)
Q Consensus 936 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~ 981 (1009)
...... ..+.+++.+|++.||++||++.|+++.|+++.++
T Consensus 226 ~~~~~~------~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 226 KPRLAS------THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp CCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCccCc------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 111111 2456788999999999999999999999988653
No 169
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.7e-37 Score=361.09 Aligned_cols=252 Identities=25% Similarity=0.392 Sum_probs=203.1
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCC-eEEEEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNET-NVMMVY 776 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~-~~~lV~ 776 (1009)
+.|+..+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|++++++++||||+++++++.+.. ..++||
T Consensus 193 ~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 193 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred HHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 56788899999999999999986 6799999996532 3466789999999999999999999987665 799999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
||+++|+|.++++... ...+++..++.++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 267 e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 341 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341 (450)
T ss_dssp ECCTTCBHHHHHHHHC--TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence 9999999999997543 22368889999999999999999999 999999999999999999999999999985432
Q ss_pred CCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccccccCcc
Q 037197 857 KNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPS 935 (1009)
Q Consensus 857 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1009)
. .....+++.|+|||.+....++.++||||||+++|||++ |+.||...... +.... +..+. ...
T Consensus 342 ~---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~----i~~~~------~~~ 406 (450)
T 1k9a_A 342 T---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPR----VEKGY------KMD 406 (450)
T ss_dssp --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--THHHH----HHTTC------CCC
T ss_pred c---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH----HHcCC------CCC
Confidence 2 222357889999999988899999999999999999998 99999743222 22222 22221 111
Q ss_pred ccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCC
Q 037197 936 IAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPR 981 (1009)
Q Consensus 936 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~ 981 (1009)
....++ ..+.+++.+||+.||++|||+.++++.|+++...
T Consensus 407 ~p~~~~------~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 407 APDGCP------PAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCcCC------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 111222 2456788999999999999999999999988643
No 170
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=5e-37 Score=345.03 Aligned_cols=267 Identities=26% Similarity=0.344 Sum_probs=211.3
Q ss_pred HHHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhc--cCCCceeeEEeEEEcCC-
Q 037197 694 SEILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGR--LRHRNIVRLLGYLHNET- 770 (1009)
Q Consensus 694 ~~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~Hpniv~l~~~~~~~~- 770 (1009)
..+.++|+..+.||+|+||.||+|++. ++.||||++.. .....+.+|+++++. ++||||+++++++....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~-----~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~ 110 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSS-----REERSWFREAEIYQTVMLRHENILGFIAADNKDNG 110 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEECG-----GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS
T ss_pred ccccccEEEEeeecCCCCcEEEEEEEc--CccEEEEEeCc-----hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC
Confidence 446678999999999999999999984 78999999843 234566788888887 78999999999998776
Q ss_pred ---eEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHH--------hcCCCCeEEeccCCCcEEeCC
Q 037197 771 ---NVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLH--------HDCQPPVIHRDIKSNNILLDA 839 (1009)
Q Consensus 771 ---~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~dlk~~NIll~~ 839 (1009)
..++||||+++|+|.++++.. .+++.+++.++.|+++||+||| +. +|+||||||+||+++.
T Consensus 111 ~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~ 182 (342)
T 1b6c_B 111 TWTQLWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKK 182 (342)
T ss_dssp SCCCEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECT
T ss_pred ccceeEEEEeecCCCcHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECC
Confidence 789999999999999999653 2789999999999999999999 66 9999999999999999
Q ss_pred CCcEEEcccccceecccCCCc----eeeecccCcccCCcccCCC------CCCcccchHhHHHHHHHHHhC---------
Q 037197 840 NLEARIADFGLARMMLHKNET----VSMVAGSYGYIAPEYGYTL------KVDEKSDIYSFGVVLLELLTG--------- 900 (1009)
Q Consensus 840 ~~~~kl~DfGls~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~sDv~SlGvvl~elltg--------- 900 (1009)
++.+||+|||++......... .....||+.|+|||++.+. .++.++||||||+++|||++|
T Consensus 183 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~ 262 (342)
T 1b6c_B 183 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED 262 (342)
T ss_dssp TSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred CCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccc
Confidence 999999999999876544322 2345789999999987765 334789999999999999999
Q ss_pred -CCCCCCCCCCCccHHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcC
Q 037197 901 -KMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAK 979 (1009)
Q Consensus 901 -~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 979 (1009)
..||............+.... .. ....+.+..... ..+....+.+++.+||+.||++||++.|+++.|+++.
T Consensus 263 ~~~p~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~ 335 (342)
T 1b6c_B 263 YQLPYYDLVPSDPSVEEMRKVV-CE-----QKLRPNIPNRWQ-SCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 335 (342)
T ss_dssp CCCTTTTTSCSSCCHHHHHHHH-TT-----SCCCCCCCGGGG-TSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccCccccCcCcccHHHHHHHH-HH-----HHhCCCCccccc-chhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 788875544433333333222 11 112222222111 1234456778999999999999999999999999987
Q ss_pred CCc
Q 037197 980 PRR 982 (1009)
Q Consensus 980 ~~~ 982 (1009)
++.
T Consensus 336 ~~~ 338 (342)
T 1b6c_B 336 QQE 338 (342)
T ss_dssp HTT
T ss_pred HHh
Confidence 654
No 171
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=349.71 Aligned_cols=268 Identities=17% Similarity=0.205 Sum_probs=200.3
Q ss_pred HhcCCcCceeccCCceEEEEEEECC---CCeEEEEEEcccCCCChh---------hHHHHHHHHHHHhccCCCceeeEEe
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHR---PHMVVAVKKLWRSDNDIE---------SGDDLFREVSLLGRLRHRNIVRLLG 764 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~---~~~~vavK~~~~~~~~~~---------~~~~~~~E~~~l~~l~Hpniv~l~~ 764 (1009)
.++|+..+.||+|+||.||+|.+.. ++..||||++........ ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 3568899999999999999999986 788999999865432111 1123557888899999999999999
Q ss_pred EEEc----CCeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCC
Q 037197 765 YLHN----ETNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDAN 840 (1009)
Q Consensus 765 ~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~ 840 (1009)
++.. ....++||||+ +++|.+++.... .+++.+++.++.||++||+|||+. +|+||||||+||+++.+
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG----TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYK 187 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccC
Confidence 9887 67899999999 999999997654 389999999999999999999999 99999999999999988
Q ss_pred C--cEEEcccccceecccCCC-------ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCC
Q 037197 841 L--EARIADFGLARMMLHKNE-------TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGS 911 (1009)
Q Consensus 841 ~--~~kl~DfGls~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~ 911 (1009)
+ .+||+|||+++.+..... ......||+.|+|||+..+..++.++|||||||++|||++|+.||.......
T Consensus 188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~ 267 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP 267 (345)
T ss_dssp STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH
T ss_pred CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc
Confidence 7 999999999987643321 1234578999999999988889999999999999999999999996322221
Q ss_pred ccHHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCC
Q 037197 912 KDIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKP 980 (1009)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 980 (1009)
.. ........... ....+..... ......++.+++.+|++.||++||++.++++.|+.+..
T Consensus 268 ~~-~~~~~~~~~~~------~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 268 VA-VQTAKTNLLDE------LPQSVLKWAP-SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HH-HHHHHHHHHHT------TTHHHHHHSC-TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HH-HHHHHHhhccc------ccHHHHhhcc-ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 11 11111111111 1111100000 00011246778899999999999999999999998764
No 172
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=5.4e-37 Score=336.16 Aligned_cols=250 Identities=25% Similarity=0.335 Sum_probs=200.6
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEc----CCeEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHN----ETNVM 773 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~----~~~~~ 773 (1009)
..|+..+.||+|+||.||+|.+..++..||+|++..........+.+.+|++++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 34777888999999999999999999999999997665555666777899999999999999999999865 45689
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCC--eEEeccCCCcEEeC-CCCcEEEccccc
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPP--VIHRDIKSNNILLD-ANLEARIADFGL 850 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~dlk~~NIll~-~~~~~kl~DfGl 850 (1009)
+||||+++++|.+++.... .+++..++.++.|++.||+|||+. + |+||||||+||+++ .++.+||+|||+
T Consensus 106 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEEecCCCCHHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 9999999999999996533 278899999999999999999998 7 99999999999997 789999999999
Q ss_pred ceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccc
Q 037197 851 ARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDE 930 (1009)
Q Consensus 851 s~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1009)
+..... .......||+.|+|||+.. ..++.++||||+|+++|+|++|+.||.... ...... .....+.
T Consensus 179 ~~~~~~--~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~----~~~~~~-~~~~~~~---- 246 (290)
T 1t4h_A 179 ATLKRA--SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQ----NAAQIY-RRVTSGV---- 246 (290)
T ss_dssp GGGCCT--TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS----SHHHHH-HHHTTTC----
T ss_pred cccccc--cccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcC----cHHHHH-HHHhccC----
Confidence 965422 2334567999999999876 458999999999999999999999997422 222222 2222111
Q ss_pred ccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 931 ALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.......... ..+.+++.+|++.||++|||+.|+++
T Consensus 247 -~~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 247 -KPASFDKVAI------PEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -CCGGGGGCCC------HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -CccccCCCCC------HHHHHHHHHHccCChhhCCCHHHHhh
Confidence 1111111111 24667899999999999999999984
No 173
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.5e-37 Score=340.22 Aligned_cols=259 Identities=24% Similarity=0.358 Sum_probs=211.5
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
.++|+..+.||+|+||.||+|.+..+++.||+|++... ....+.+.+|++++++++||||+++++++.++...++||
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC---STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 45688889999999999999999999999999999543 344567779999999999999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
||+++++|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 89 e~~~~~~L~~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 163 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 163 (288)
T ss_dssp ECCTTEEHHHHHHHCCT--TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred EcCCCCcHHHHHHhccc--CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence 99999999999975432 3378899999999999999999999 999999999999999999999999999987644
Q ss_pred CCC-ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccccccCc
Q 037197 857 KNE-TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDP 934 (1009)
Q Consensus 857 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1009)
... ......+++.|+|||......++.++||||||+++|+|++ |..||..... ....+.+ .... ..
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~--~~~~~~~----~~~~------~~ 231 (288)
T 3kfa_A 164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELL----EKDY------RM 231 (288)
T ss_dssp SSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHH----HTTC------CC
T ss_pred CccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH----hccC------CC
Confidence 332 2233456789999999988889999999999999999999 9999974321 1222221 1111 11
Q ss_pred cccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCC
Q 037197 935 SIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPR 981 (1009)
Q Consensus 935 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~ 981 (1009)
.....++ ..+.+++.+|++.||++||++.|+++.|+.+..+
T Consensus 232 ~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 232 ERPEGCP------EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp CCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCC------HHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 1111111 2466788999999999999999999999987654
No 174
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=342.41 Aligned_cols=267 Identities=22% Similarity=0.281 Sum_probs=197.7
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCC---hhhHHHHHHHHHHHhcc---CCCceeeEEeEEEcC
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDND---IESGDDLFREVSLLGRL---RHRNIVRLLGYLHNE 769 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l---~Hpniv~l~~~~~~~ 769 (1009)
+.++|+..+.||+|+||+||+|++..+++.||||++...... ........+|+++++++ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 457899999999999999999999999999999998643321 11223455677666665 599999999999775
Q ss_pred C-----eEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEE
Q 037197 770 T-----NVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEAR 844 (1009)
Q Consensus 770 ~-----~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~k 844 (1009)
. ..++||||++ ++|.+++...... .+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~k 160 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPP--GLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVK 160 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTT--CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEE
Confidence 5 5899999996 6999999765432 278999999999999999999999 999999999999999999999
Q ss_pred EcccccceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhh
Q 037197 845 IADFGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKS 924 (1009)
Q Consensus 845 l~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 924 (1009)
|+|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+....+......
T Consensus 161 l~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~~ 237 (308)
T 3g33_A 161 LADFGLARIYSYQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS--EADQLGKIFDLIGL 237 (308)
T ss_dssp ECSCSCTTTSTTC-CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSS--HHHHHHHHHHHHCC
T ss_pred EeeCccccccCCC-cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCC
Confidence 9999999765332 23345678999999999988899999999999999999999999997321 11222222221111
Q ss_pred ccccccccCc-------cccccCchH-----HHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 925 NKAQDEALDP-------SIAGQCKHV-----QEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 925 ~~~~~~~~~~-------~~~~~~~~~-----~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
. ....... .+....... .+....+.+++.+|++.||++|||+.|+++
T Consensus 238 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 238 P--PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp C--CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred C--ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 0 0000000 000000000 011234667899999999999999999874
No 175
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2.8e-37 Score=363.61 Aligned_cols=256 Identities=24% Similarity=0.323 Sum_probs=204.2
Q ss_pred HHHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEE
Q 037197 694 SEILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 694 ~~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 773 (1009)
..+.++|+..+.||+|+||+||+|.+..+++.||||++............+.+|++++++++||||+++++++.+....+
T Consensus 18 g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 97 (486)
T 3mwu_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (486)
T ss_dssp CHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEE
Confidence 35678899999999999999999999999999999998654322334567789999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeC---CCCcEEEccccc
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLD---ANLEARIADFGL 850 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~---~~~~~kl~DfGl 850 (1009)
+||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++ .++.+||+|||+
T Consensus 98 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~ 170 (486)
T 3mwu_A 98 IVGELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGL 170 (486)
T ss_dssp EEECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSC
T ss_pred EEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCc
Confidence 9999999999999886543 278999999999999999999999 999999999999995 456799999999
Q ss_pred ceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccc
Q 037197 851 ARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDE 930 (1009)
Q Consensus 851 s~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1009)
++.+... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||... .....+.... .+.. .
T Consensus 171 a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~~~i~-~~~~--~ 240 (486)
T 3mwu_A 171 STCFQQN-TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK-----NEYDILKRVE-TGKY--A 240 (486)
T ss_dssp TTTBCCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHH-HTCC--C
T ss_pred CeECCCC-CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHH-hCCC--C
Confidence 9865332 33345679999999999765 5899999999999999999999999632 2222222222 2211 0
Q ss_pred ccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 931 ALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
...+... .. ...+.+++.+|++.||++|||+.|+++
T Consensus 241 ~~~~~~~----~~---s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 241 FDLPQWR----TI---SDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp SCSGGGG----GS---CHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCCcccC----CC---CHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0111111 11 124567889999999999999999987
No 176
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.1e-37 Score=347.89 Aligned_cols=268 Identities=25% Similarity=0.372 Sum_probs=209.4
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEE--EEEEcccCCCChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCCeEEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVV--AVKKLWRSDNDIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNETNVMM 774 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~v--avK~~~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~l 774 (1009)
++|+..+.||+|+||.||+|.+..++..+ |+|.+... ......+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc-cchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 56888999999999999999998878755 99988643 2233456677999999999 89999999999999999999
Q ss_pred EEeccCCCChhhhhcCCc------------cccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCc
Q 037197 775 VYDYMPNDSLGEALHGKE------------AGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLE 842 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~------------~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~ 842 (1009)
||||+++++|.+++.... .....+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 999999999999997654 1223488999999999999999999999 9999999999999999999
Q ss_pred EEEcccccceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHH
Q 037197 843 ARIADFGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSM 921 (1009)
Q Consensus 843 ~kl~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~ 921 (1009)
+||+|||+++..... .......+++.|+|||+.....++.++||||||+++|||++ |+.||... ...... ..
T Consensus 181 ~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~-----~~~~~~-~~ 253 (327)
T 1fvr_A 181 AKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-----TCAELY-EK 253 (327)
T ss_dssp EEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHH-HH
T ss_pred EEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC-----cHHHHH-HH
Confidence 999999999743221 22233456889999999888888999999999999999998 99999632 112221 22
Q ss_pred HhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCccccccc
Q 037197 922 IKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRRKSICQN 988 (1009)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~~~~~~~ 988 (1009)
+..+. ........+ ..+.+++.+|++.||++||++.|+++.|+++..+++...+.
T Consensus 254 ~~~~~------~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~~ 308 (327)
T 1fvr_A 254 LPQGY------RLEKPLNCD------DEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNT 308 (327)
T ss_dssp GGGTC------CCCCCTTBC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSCSBCC
T ss_pred hhcCC------CCCCCCCCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcCcccc
Confidence 21111 111111111 24667889999999999999999999999988776654443
No 177
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.6e-37 Score=340.30 Aligned_cols=265 Identities=25% Similarity=0.349 Sum_probs=201.2
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEEe
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVYD 777 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~E 777 (1009)
++|+..+.||+|+||.||+|.+..+++.||||++............+.+|++++++++||||+++++++.+++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 46888899999999999999999889999999996554334445677799999999999999999999999999999999
Q ss_pred ccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecccC
Q 037197 778 YMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLHK 857 (1009)
Q Consensus 778 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~ 857 (1009)
|++ ++|.+++..... ..+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.+......
T Consensus 83 ~~~-~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 83 FLH-QDLKKFMDASAL--TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp CCS-EEHHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred ccc-CCHHHHHHhhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 997 699999875532 2268888999999999999999999 9999999999999999999999999999876444
Q ss_pred CCceeeecccCcccCCcccCCCC-CCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccccc----
Q 037197 858 NETVSMVAGSYGYIAPEYGYTLK-VDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEAL---- 932 (1009)
Q Consensus 858 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 932 (1009)
........+|+.|+|||...+.. ++.++||||||+++|||++|+.||... +................+..
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 231 (299)
T 2r3i_A 157 VRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGD-----SEIDQLFRIFRTLGTPDEVVWPGV 231 (299)
T ss_dssp SBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHHHHHHHCCCCTTTSTTG
T ss_pred ccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCc-----cHHHHHHHHHHHhCCCchhhhhHh
Confidence 33344456899999999987655 789999999999999999999999732 11222222222111111111
Q ss_pred ------CccccccCch-H----HHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 933 ------DPSIAGQCKH-V----QEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 933 ------~~~~~~~~~~-~----~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.+.+...... . .....++.+++.+|++.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp GGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 1111100000 0 001134668899999999999999999986
No 178
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.2e-37 Score=340.20 Aligned_cols=256 Identities=23% Similarity=0.350 Sum_probs=206.5
Q ss_pred HHHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEc-----
Q 037197 694 SEILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHN----- 768 (1009)
Q Consensus 694 ~~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~----- 768 (1009)
..+..+|+..+.||+|+||.||+|.+..+++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (284)
T 2a19_B 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDP 80 (284)
T ss_dssp HHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-
T ss_pred chhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCc
Confidence 446678999999999999999999999889999999995432 345689999999999999999998854
Q ss_pred -----------CCeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEe
Q 037197 769 -----------ETNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILL 837 (1009)
Q Consensus 769 -----------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll 837 (1009)
....++||||+++++|.+++..... ..+++..++.++.|+++||+|||+. +|+||||||+||++
T Consensus 81 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 155 (284)
T 2a19_B 81 ETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG--EKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFL 155 (284)
T ss_dssp --------CCEEEEEEEEECCCCSCBHHHHHHHGGG--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred ccccccccccCcceEEEEEeccCCCCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEE
Confidence 4458999999999999999975432 2378899999999999999999999 99999999999999
Q ss_pred CCCCcEEEcccccceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHH
Q 037197 838 DANLEARIADFGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEW 917 (1009)
Q Consensus 838 ~~~~~~kl~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~ 917 (1009)
+.++.+||+|||++....... ......+++.|+|||...+..++.++||||||+++|||++|..|+.. ....
T Consensus 156 ~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~-------~~~~ 227 (284)
T 2a19_B 156 VDTKQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE-------TSKF 227 (284)
T ss_dssp EETTEEEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHH-------HHHH
T ss_pred cCCCCEEECcchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchh-------HHHH
Confidence 999999999999998764432 23345689999999999888899999999999999999999988641 1111
Q ss_pred HHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCccc
Q 037197 918 VLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRRKS 984 (1009)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~~~ 984 (1009)
.. ..... .+...++ ..+.+++.+|++.||++||++.|+++.|+.+......
T Consensus 228 ~~-~~~~~---------~~~~~~~------~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 228 FT-DLRDG---------IISDIFD------KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp HH-HHHTT---------CCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred HH-Hhhcc---------cccccCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence 11 11111 1111111 1356788999999999999999999999998765543
No 179
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=3.8e-37 Score=349.48 Aligned_cols=261 Identities=23% Similarity=0.287 Sum_probs=195.1
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCC------
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNET------ 770 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~------ 770 (1009)
.++|+..+.||+|+||.||+|.+..+++.||||++..........+.+.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 46789999999999999999999999999999999765555556677789999999999999999999997654
Q ss_pred eEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccc
Q 037197 771 NVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGL 850 (1009)
Q Consensus 771 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGl 850 (1009)
..++||||++ ++|.+++... +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~-~~l~~~~~~~------~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQME------LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp EEEEEEECCS-EEHHHHHHSC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred ceEEEEEcCC-CCHHHHHhhc------cCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 7899999997 5788887532 78888999999999999999999 999999999999999999999999999
Q ss_pred ceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcc-ccc
Q 037197 851 ARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNK-AQD 929 (1009)
Q Consensus 851 s~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~-~~~ 929 (1009)
++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ....+........ ...
T Consensus 174 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~~~~~~~~ 247 (371)
T 2xrw_A 174 ARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD-----HIDQWNKVIEQLGTPCP 247 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHC-CCCCCH
T ss_pred ccccccc-cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHhCCCCH
Confidence 9865332 23344678999999999998889999999999999999999999997421 1111111111100 000
Q ss_pred c--------------------------ccCcc-ccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 930 E--------------------------ALDPS-IAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 930 ~--------------------------~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
+ .+... ..............+.+++.+|++.||++|||++|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 248 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0 00000 00001111122446788999999999999999999986
No 180
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=355.37 Aligned_cols=256 Identities=20% Similarity=0.186 Sum_probs=200.7
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC-ChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN-DIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
.+.|+..+.||+|+||.||+|+++.+++.||+|++.+... .......+.+|.+++..++||||+++++++.+.+..|+|
T Consensus 60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV 139 (412)
T 2vd5_A 60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLV 139 (412)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence 4678999999999999999999999999999999854311 112234466899999999999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
|||+++|+|.++++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 140 mE~~~gg~L~~~l~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~~ 213 (412)
T 2vd5_A 140 MEYYVGGDLLTLLSKFG---ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKLR 213 (412)
T ss_dssp ECCCCSCBHHHHHHHHS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EcCCCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheecc
Confidence 99999999999997532 1378889999999999999999998 99999999999999999999999999998765
Q ss_pred cCCCc-eeeecccCcccCCcccC-------CCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccc
Q 037197 856 HKNET-VSMVAGSYGYIAPEYGY-------TLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKA 927 (1009)
Q Consensus 856 ~~~~~-~~~~~gt~~y~aPE~~~-------~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 927 (1009)
..... .....||+.|+|||++. ...++.++|||||||++|||++|+.||... +..+..........
T Consensus 214 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~-----~~~~~~~~i~~~~~- 287 (412)
T 2vd5_A 214 ADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD-----STAETYGKIVHYKE- 287 (412)
T ss_dssp TTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHTHHH-
T ss_pred CCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC-----CHHHHHHHHHhccc-
Confidence 44332 23467999999999876 456899999999999999999999999732 22222222221110
Q ss_pred cccccCccccccCchHHHHHHHHHHHHHHhccCCCCCC---CCHHHHHH
Q 037197 928 QDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGR---PTMRDVIT 973 (1009)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~R---Ps~~evl~ 973 (1009)
....+......+ .++..++.+|+. +|++| |+++|+++
T Consensus 288 --~~~~p~~~~~~s------~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 288 --HLSLPLVDEGVP------EEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp --HCCCC----CCC------HHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred --CcCCCccccCCC------HHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 001111111111 245678889999 99998 58888875
No 181
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-37 Score=348.03 Aligned_cols=268 Identities=25% Similarity=0.312 Sum_probs=198.4
Q ss_pred HHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCCh---hhHHHHHHHHHHHhccCCCceeeEEeEEEcCCe
Q 037197 695 EILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDI---ESGDDLFREVSLLGRLRHRNIVRLLGYLHNETN 771 (1009)
Q Consensus 695 ~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~ 771 (1009)
...++|+..+.||+|+||.||+|.+..+++.||||++....... .....+.+|++++++++||||+++++++.+...
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34577999999999999999999999989999999996532211 112456799999999999999999999999999
Q ss_pred EEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccc
Q 037197 772 VMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLA 851 (1009)
Q Consensus 772 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls 851 (1009)
.++||||+++ +|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNS---LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLA 159 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCC---SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGG
T ss_pred eEEEEEcCCC-CHHHHHHhcC---cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccc
Confidence 9999999975 8888886543 2377888899999999999999999 9999999999999999999999999999
Q ss_pred eecccCCCceeeecccCcccCCcccCCC-CCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccc
Q 037197 852 RMMLHKNETVSMVAGSYGYIAPEYGYTL-KVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDE 930 (1009)
Q Consensus 852 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1009)
+.............+|+.|+|||++.+. .++.++|||||||++|||++|..||... .....+............
T Consensus 160 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~-----~~~~~~~~i~~~~~~~~~ 234 (346)
T 1ua2_A 160 KSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD-----SDLDQLTRIFETLGTPTE 234 (346)
T ss_dssp STTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHHHCCCCT
T ss_pred eeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHHHcCCCCh
Confidence 8765544445556789999999988654 5889999999999999999999998632 112222222221110000
Q ss_pred ccCccccc--------cCc-hH-----HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 037197 931 ALDPSIAG--------QCK-HV-----QEEMLLVLRIAVLCTAKLPKGRPTMRDVITM 974 (1009)
Q Consensus 931 ~~~~~~~~--------~~~-~~-----~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 974 (1009)
...+.... ... .. ......+.+++.+|++.||++|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 235 EQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00000000 000 00 0111356789999999999999999999874
No 182
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.8e-37 Score=351.35 Aligned_cols=271 Identities=16% Similarity=0.210 Sum_probs=203.5
Q ss_pred HhcCCcCceeccCCceEEEEEEECCC-----CeEEEEEEcccCCCChhh---------HHHHHHHHHHHhccCCCceeeE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRP-----HMVVAVKKLWRSDNDIES---------GDDLFREVSLLGRLRHRNIVRL 762 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~-----~~~vavK~~~~~~~~~~~---------~~~~~~E~~~l~~l~Hpniv~l 762 (1009)
.++|+..+.||+|+||.||+|.+..+ ++.||||++......... .....+|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 45799999999999999999998764 578999998654211110 1123345566778889999999
Q ss_pred EeEEEcC----CeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeC
Q 037197 763 LGYLHNE----TNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLD 838 (1009)
Q Consensus 763 ~~~~~~~----~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~ 838 (1009)
++++... .+.++||||+ +++|.+++.... ..+++..++.|+.||+.||+|||+. +|+||||||+||+++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA---KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLN 186 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEE
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEe
Confidence 9998764 4589999999 999999997642 2389999999999999999999999 999999999999999
Q ss_pred --CCCcEEEcccccceecccCCC-------ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCC
Q 037197 839 --ANLEARIADFGLARMMLHKNE-------TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFG 909 (1009)
Q Consensus 839 --~~~~~kl~DfGls~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~ 909 (1009)
.++.+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~ 266 (364)
T 3op5_A 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK 266 (364)
T ss_dssp SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 889999999999987644321 11334599999999999998999999999999999999999999974322
Q ss_pred CCccHHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 910 GSKDIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
. .............. .....++.+.. ... ..++.+++..|++.||++||++.++++.|+++..+.
T Consensus 267 ~-~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~---~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~ 331 (364)
T 3op5_A 267 D-PKYVRDSKIRYREN--IASLMDKCFPA--ANA---PGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI 331 (364)
T ss_dssp C-HHHHHHHHHHHHHC--HHHHHHHHSCT--TCC---CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred C-HHHHHHHHHHhhhh--HHHHHHHhccc--ccC---HHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence 2 22222222211111 11112211110 011 124667889999999999999999999999886543
No 183
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.1e-36 Score=343.59 Aligned_cols=265 Identities=21% Similarity=0.309 Sum_probs=202.6
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEc--------
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHN-------- 768 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~-------- 768 (1009)
.++|+..+.||+|+||.||+|.+..+++.||||++............+.+|++++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 467899999999999999999999999999999997665555555677799999999999999999999876
Q ss_pred CCeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccc
Q 037197 769 ETNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADF 848 (1009)
Q Consensus 769 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 848 (1009)
.+..++||||+++ ++.+.+..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CceEEEEEeccCC-CHHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccc
Confidence 4468999999975 67777755432 278999999999999999999999 9999999999999999999999999
Q ss_pred ccceecccCC----CceeeecccCcccCCcccCC-CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHh
Q 037197 849 GLARMMLHKN----ETVSMVAGSYGYIAPEYGYT-LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIK 923 (1009)
Q Consensus 849 Gls~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 923 (1009)
|+++.+.... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .......+.....
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~i~~~~~ 246 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT--EQHQLALISQLCG 246 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHC
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhC
Confidence 9998764322 22344568999999998765 458999999999999999999999997421 1122222221111
Q ss_pred hccccccccCccc------------cccCchHHHH------HHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 924 SNKAQDEALDPSI------------AGQCKHVQEE------MLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 924 ~~~~~~~~~~~~~------------~~~~~~~~~~------~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
. ......+.. ........+. ...+.+++.+|++.||++|||++|+++
T Consensus 247 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 247 S---ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp C---CCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred C---CChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 1 111111110 0001111111 123678999999999999999999886
No 184
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.1e-39 Score=354.06 Aligned_cols=264 Identities=26% Similarity=0.352 Sum_probs=189.3
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhc--cCCCceeeEEeEEEcCC----
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGR--LRHRNIVRLLGYLHNET---- 770 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~Hpniv~l~~~~~~~~---- 770 (1009)
.++|+..+.||+|+||.||+|++. ++.||||++... ....+.+|.+++.. ++||||+++++++....
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 74 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT--TSCEEEEECC-T-----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSE
T ss_pred cceeeehhhccCCCCeEEEEEEEc--CcceEEEEeccc-----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccc
Confidence 357899999999999999999875 788999998432 33556678888877 79999999999998776
Q ss_pred eEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHH--------hcCCCCeEEeccCCCcEEeCCCCc
Q 037197 771 NVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLH--------HDCQPPVIHRDIKSNNILLDANLE 842 (1009)
Q Consensus 771 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~dlk~~NIll~~~~~ 842 (1009)
..++||||+++|+|.++++... +++..++.++.|++.||+||| +. +|+||||||+||+++.++.
T Consensus 75 ~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~ 146 (303)
T 3gxj_A 75 QLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGT 146 (303)
T ss_dssp EEEEEEECCTTCCHHHHHHHCC-----BCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCC
T ss_pred eeEEEEeccCCCCHHHHHhccC-----cchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCC
Confidence 7899999999999999996542 677888899999999999999 66 9999999999999999999
Q ss_pred EEEcccccceecccCCCc----eeeecccCcccCCcccCCC------CCCcccchHhHHHHHHHHHhC----------CC
Q 037197 843 ARIADFGLARMMLHKNET----VSMVAGSYGYIAPEYGYTL------KVDEKSDIYSFGVVLLELLTG----------KM 902 (1009)
Q Consensus 843 ~kl~DfGls~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~sDv~SlGvvl~elltg----------~~ 902 (1009)
+||+|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||++| +.
T Consensus 147 ~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~ 226 (303)
T 3gxj_A 147 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 226 (303)
T ss_dssp C-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCC
T ss_pred EEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeec
Confidence 999999999776444322 2334799999999987765 445789999999999999999 66
Q ss_pred CCCCCCCCCccHHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 903 PLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 903 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
||............... .+. .....+.+...+. ..+....+.+++.+||+.||++|||+.|+++.|+++..+.
T Consensus 227 p~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 227 PYYDLVPSDPSVEEMRK-VVC-----EQKLRPNIPNRWQ-SCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp TTTTTCC-CCCCC-CHH-HHT-----TSCCCCCCCGGGG-SSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred cccccCCCCccHHHHHH-HHH-----HhhcCCCcccccc-chhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 76543222111111111 111 1112222222111 1233456788999999999999999999999999998654
No 185
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.4e-37 Score=338.82 Aligned_cols=253 Identities=19% Similarity=0.298 Sum_probs=200.9
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCC-------eEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcC
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPH-------MVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNE 769 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~-------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~ 769 (1009)
.++|+..+.||+|+||.||+|.+..++ ..||+|++... .....+.+.+|++++++++||||+++++++.++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA--HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG--GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc--cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 356888899999999999999988765 57999998543 234456777999999999999999999999999
Q ss_pred CeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCc-------
Q 037197 770 TNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLE------- 842 (1009)
Q Consensus 770 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~------- 842 (1009)
+..++||||+++|+|.+++..... .+++..++.++.|+++||+|||++ +|+||||||+||+++.++.
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 158 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKKNKN---CINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPP 158 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHHTGG---GCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred CCCEEEEECCCCCCHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccc
Confidence 999999999999999999976432 278889999999999999999999 9999999999999998887
Q ss_pred -EEEcccccceecccCCCceeeecccCcccCCcccCC-CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHH
Q 037197 843 -ARIADFGLARMMLHKNETVSMVAGSYGYIAPEYGYT-LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLS 920 (1009)
Q Consensus 843 -~kl~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 920 (1009)
+||+|||.+...... ....+++.|+|||+..+ ..++.++||||||+++|||++|..|+.... +..... .
T Consensus 159 ~~kl~Dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~----~~~~~~-~ 229 (289)
T 4fvq_A 159 FIKLSDPGISITVLPK----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL----DSQRKL-Q 229 (289)
T ss_dssp EEEECCCCSCTTTSCH----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS----CHHHHH-H
T ss_pred eeeeccCcccccccCc----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc----chHHHH-H
Confidence 999999998654221 23457899999998876 678999999999999999999655443211 111111 1
Q ss_pred HHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCC
Q 037197 921 MIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKP 980 (1009)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 980 (1009)
...... ....... .++.+++.+|++.||++|||+.|+++.|+++..
T Consensus 230 ~~~~~~----~~~~~~~----------~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 230 FYEDRH----QLPAPKA----------AELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp HHHTTC----CCCCCSS----------CTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred HhhccC----CCCCCCC----------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 111111 1111111 134578889999999999999999999999875
No 186
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.8e-38 Score=348.18 Aligned_cols=259 Identities=24% Similarity=0.381 Sum_probs=199.7
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeE----EEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMV----VAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 773 (1009)
++|+..+.||+|+||.||+|.+..+++. ||+|.+... ........+.+|++++++++||||+++++++..+. .+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC-SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc-cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 5688899999999999999999877654 477776433 23345567789999999999999999999998765 78
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
+|+||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKD---NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred EEEEecCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 99999999999999976432 278899999999999999999999 999999999999999999999999999987
Q ss_pred cccCCC--ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhcccccc
Q 037197 854 MLHKNE--TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDE 930 (1009)
Q Consensus 854 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1009)
...... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..... ......+ ..+.
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~~~~----~~~~---- 236 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSIL----EKGE---- 236 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHH----HTTC----
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHHHHH----HcCC----
Confidence 644332 2233456778999999998899999999999999999999 9999974322 2222221 1111
Q ss_pred ccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 931 ALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
.......+. ..+.+++.+||+.||++||++.|+++.|+++....
T Consensus 237 --~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 237 --RLPQPPICT------IDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp --CCCCCTTBC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred --CCCCCccCC------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 001111111 24667889999999999999999999999887543
No 187
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.3e-36 Score=335.51 Aligned_cols=251 Identities=26% Similarity=0.402 Sum_probs=207.8
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
.+.|+..+.||+|+||.||+|.+..+++.||+|++..... ....+.+.+|+.++++++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 99 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC-STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 4568889999999999999999999999999999965433 234567779999999999999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
||+++++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 100 e~~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 100 EYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp ECCTTEEHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred EeCCCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 999999999999653 278999999999999999999999 999999999999999999999999999987655
Q ss_pred CCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCccc
Q 037197 857 KNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSI 936 (1009)
Q Consensus 857 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1009)
.........|++.|+|||+..+..++.++||||||+++|||++|+.||.... ....... +.... .+.+
T Consensus 172 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~-~~~~~------~~~~ 239 (303)
T 3a7i_A 172 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH-----PMKVLFL-IPKNN------PPTL 239 (303)
T ss_dssp TBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHH-HHHSC------CCCC
T ss_pred cccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC-----HHHHHHH-hhcCC------CCCC
Confidence 4444455678999999999998899999999999999999999999997321 1111111 11111 1112
Q ss_pred cccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 037197 937 AGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITM 974 (1009)
Q Consensus 937 ~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 974 (1009)
...++ ..+.+++.+|++.||++||++.|+++.
T Consensus 240 ~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 240 EGNYS------KPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp CSSCC------HHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred ccccC------HHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 22222 245678899999999999999999873
No 188
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=346.86 Aligned_cols=251 Identities=22% Similarity=0.354 Sum_probs=195.8
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCC--CceeeEEeEEEcCCeEEEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRH--RNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H--pniv~l~~~~~~~~~~~lV 775 (1009)
+.|+..+.||+|+||.||+|.+.. ++.||||++..........+.+.+|++++++++| |||+++++++.++...++|
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTT-SCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCC-CCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 468889999999999999999865 8899999997665555666777899999999976 9999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
|| +.+++|.+++..... +++.++..++.|+++||+|||+. +|+||||||+||+++ ++.+||+|||+++...
T Consensus 88 ~e-~~~~~L~~~l~~~~~----~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKKS----IDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EC-CCSEEHHHHHHHSCC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred Ee-CCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 99 568899999976432 78889999999999999999999 999999999999997 6789999999998764
Q ss_pred cCCC--ceeeecccCcccCCcccCC-----------CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHH
Q 037197 856 HKNE--TVSMVAGSYGYIAPEYGYT-----------LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMI 922 (1009)
Q Consensus 856 ~~~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 922 (1009)
.... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||..... ....+....
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~~~~~~~ 234 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN----QISKLHAII 234 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS----HHHHHHHHH
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh----HHHHHHHHh
Confidence 3332 2335679999999998754 6788999999999999999999999974321 222222222
Q ss_pred hhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 037197 923 KSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITM 974 (1009)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 974 (1009)
.... ...+..... ..+.+++.+||+.||++|||+.|+++-
T Consensus 235 ~~~~------~~~~~~~~~------~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 235 DPNH------EIEFPDIPE------KDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp CTTS------CCCCCCCSC------HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCCc------ccCCcccCC------HHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1111 111111111 245678899999999999999999863
No 189
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=345.22 Aligned_cols=264 Identities=20% Similarity=0.280 Sum_probs=205.1
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEE----cCCeEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLH----NETNVM 773 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~----~~~~~~ 773 (1009)
++|+..+.||+|+||.||+|.+..+++.||||++... .....+.+.+|++++++++||||+++++++. .....+
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 5688999999999999999999988999999998543 3445567779999999999999999999986 345789
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
+||||+++|+|.+++.........+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 99999999999999976433344589999999999999999999999 999999999999999999999999999876
Q ss_pred cccCCC---------ceeeecccCcccCCcccCCCC---CCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHH
Q 037197 854 MLHKNE---------TVSMVAGSYGYIAPEYGYTLK---VDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSM 921 (1009)
Q Consensus 854 ~~~~~~---------~~~~~~gt~~y~aPE~~~~~~---~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 921 (1009)
...... ......||+.|+|||.+.... ++.++||||||+++|||++|+.||.............+.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-- 261 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ-- 261 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHH--
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhh--
Confidence 532111 112345689999999876543 688999999999999999999999632111112221111
Q ss_pred HhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 922 IKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
... . .+. .... ...+.+++.+|++.||++||++.|+++.|+.+....
T Consensus 262 --~~~--~---~~~-~~~~------~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 262 --NQL--S---IPQ-SPRH------SSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp --CC-------CCC-CTTS------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred --ccC--C---CCc-cccC------CHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 110 0 000 0111 124667899999999999999999999999987543
No 190
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=6.6e-37 Score=336.55 Aligned_cols=265 Identities=17% Similarity=0.187 Sum_probs=203.6
Q ss_pred HHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEE-EcCCeEE
Q 037197 695 EILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYL-HNETNVM 773 (1009)
Q Consensus 695 ~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~-~~~~~~~ 773 (1009)
.+.++|+..+.||+|+||.||+|.+..+++.||||++..... ...+.+|++++++++|++++..+.++ .+++..+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence 355789999999999999999999999999999998754322 23466899999999988777666654 6778889
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEe---CCCCcEEEccccc
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILL---DANLEARIADFGL 850 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~DfGl 850 (1009)
+||||+ +++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+
T Consensus 82 lv~e~~-~~~L~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~ 154 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNFCSR---KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154 (296)
T ss_dssp EEEECC-CCBHHHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTT
T ss_pred EEEEcc-CCCHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCcc
Confidence 999999 9999999974322 278999999999999999999999 99999999999999 7889999999999
Q ss_pred ceecccCCC-------ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCC-CccHHHHHHHHH
Q 037197 851 ARMMLHKNE-------TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGG-SKDIVEWVLSMI 922 (1009)
Q Consensus 851 s~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~-~~~~~~~~~~~~ 922 (1009)
++....... ......||+.|+|||...+..++.++|||||||++|||++|+.||...... .......+....
T Consensus 155 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 234 (296)
T 4hgt_A 155 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK 234 (296)
T ss_dssp CEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH
T ss_pred ceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccc
Confidence 987654332 223457899999999999989999999999999999999999999754322 112222221111
Q ss_pred hhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 923 KSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
.... . +.....+ ...+.+++.+|++.||++||++.++++.|+++..+.
T Consensus 235 ~~~~--~----~~~~~~~------~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 235 MSTP--I----EVLCKGY------PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHSC--H----HHHTTTS------CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred ccch--h----hhhhccC------CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence 1100 0 0000111 124667889999999999999999999999987544
No 191
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-37 Score=349.15 Aligned_cols=263 Identities=24% Similarity=0.360 Sum_probs=199.7
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcC------C
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNE------T 770 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~------~ 770 (1009)
.++|+..+.||+|+||.||+|.+..+|+.||||++..........+++.+|+++++.++||||+++++++... .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 4678899999999999999999999999999999976555555567788999999999999999999999765 3
Q ss_pred eEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccc
Q 037197 771 NVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGL 850 (1009)
Q Consensus 771 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGl 850 (1009)
.+|+||||+ +++|.++++.. .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE-----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 469999999 88999998653 278889999999999999999999 999999999999999999999999999
Q ss_pred ceecccCCCceeeecccCcccCCcccCC-CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhc-ccc
Q 037197 851 ARMMLHKNETVSMVAGSYGYIAPEYGYT-LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSN-KAQ 928 (1009)
Q Consensus 851 s~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~-~~~ 928 (1009)
++.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||... +....+....... ...
T Consensus 175 a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-----~~~~~l~~i~~~~g~~~ 246 (367)
T 1cm8_A 175 ARQADS---EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS-----DHLDQLKEIMKVTGTPP 246 (367)
T ss_dssp CEECCS---SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHHHCCCC
T ss_pred cccccc---ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHHhcCCCC
Confidence 987532 2344578999999998776 67899999999999999999999999732 1122222211111 000
Q ss_pred c-------------------cccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH--HHhhcC
Q 037197 929 D-------------------EALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT--MLGEAK 979 (1009)
Q Consensus 929 ~-------------------~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~--~L~~~~ 979 (1009)
. ......+....... ...+.+++.+|++.||++|||+.|+++ .+.+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 247 AEFVQRLQSDEAKNYMKGLPELEKKDFASILTNA---SPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp HHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTC---CHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCC---CHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence 0 00011111111111 224667889999999999999999988 455443
No 192
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.3e-37 Score=343.13 Aligned_cols=263 Identities=22% Similarity=0.344 Sum_probs=199.4
Q ss_pred HhcCCcCceeccCCceEEEEEEECC---CCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCC---
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHR---PHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNET--- 770 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~--- 770 (1009)
.++|+..+.||+|+||.||+|.+.. +++.||+|++..........+.+.+|++++++++||||+++++++.+..
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 112 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG 112 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence 3568899999999999999998764 4668999999766555556677889999999999999999999987654
Q ss_pred --eEEEEEeccCCCChhhhhcCCc--cccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEc
Q 037197 771 --NVMMVYDYMPNDSLGEALHGKE--AGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIA 846 (1009)
Q Consensus 771 --~~~lV~E~~~~gsL~~~l~~~~--~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 846 (1009)
..++||||+++|+|.+++.... .....+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~ 189 (313)
T 3brb_A 113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVA 189 (313)
T ss_dssp --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEEC
T ss_pred CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEe
Confidence 3599999999999999985332 2234489999999999999999999998 99999999999999999999999
Q ss_pred ccccceecccCC--CceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHh
Q 037197 847 DFGLARMMLHKN--ETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIK 923 (1009)
Q Consensus 847 DfGls~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~ 923 (1009)
|||+++...... .......+++.|+|||...+..++.++||||||+++|||++ |..||..... ......+ .
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~----~ 263 (313)
T 3brb_A 190 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN--HEMYDYL----L 263 (313)
T ss_dssp SCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHH----H
T ss_pred ecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH--HHHHHHH----H
Confidence 999998764433 22234457889999999988899999999999999999999 8899874321 1222211 1
Q ss_pred hccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCC
Q 037197 924 SNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKP 980 (1009)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 980 (1009)
.+. .+.....+. ..+.+++.+|++.||++||++.++++.|+++..
T Consensus 264 ~~~------~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 264 HGH------RLKQPEDCL------DELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp TTC------CCCCBTTCC------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCC------CCCCCcccc------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111 111111111 246678899999999999999999999998764
No 193
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.2e-37 Score=360.42 Aligned_cols=256 Identities=26% Similarity=0.412 Sum_probs=200.4
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEEe
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVYD 777 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~E 777 (1009)
+.|+..+.||+|+||.||+|.+.. +..||||+++... ...+.+.+|++++++++||||+++++++.+ +..++|||
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 457788899999999999999987 5679999996542 234677899999999999999999999876 67899999
Q ss_pred ccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecccC
Q 037197 778 YMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLHK 857 (1009)
Q Consensus 778 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~ 857 (1009)
|+++|+|.++++... ...+++.+++.++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 259 ~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 333 (452)
T 1fmk_A 259 YMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 333 (452)
T ss_dssp CCTTCBHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred hhcCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCC
Confidence 999999999996432 12378889999999999999999999 9999999999999999999999999999876433
Q ss_pred CC-ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccccccCcc
Q 037197 858 NE-TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPS 935 (1009)
Q Consensus 858 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1009)
.. ......+++.|+|||.+....++.++||||||+++|||++ |+.||... ...+. ...+..+. ...
T Consensus 334 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~-----~~~~~-~~~i~~~~------~~~ 401 (452)
T 1fmk_A 334 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-----VNREV-LDQVERGY------RMP 401 (452)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC-----CHHHH-HHHHHTTC------CCC
T ss_pred ceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC-----CHHHH-HHHHHcCC------CCC
Confidence 21 2223456789999999888899999999999999999999 99999732 11222 22222221 111
Q ss_pred ccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCC
Q 037197 936 IAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPR 981 (1009)
Q Consensus 936 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~ 981 (1009)
....++ ..+.+++.+||+.||++|||+.++++.|+++...
T Consensus 402 ~~~~~~------~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 402 CPPECP------ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp CCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred CCCCCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 111121 2456788999999999999999999999998754
No 194
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3e-37 Score=362.72 Aligned_cols=255 Identities=23% Similarity=0.278 Sum_probs=205.3
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC-ChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN-DIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
+.|+..+.||+|+||.||+|.+..+++.||+|++.+... .......+.+|++++++++||||+++++++.+.+..++||
T Consensus 184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 263 (576)
T 2acx_A 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 263 (576)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEE
Confidence 568888999999999999999999999999999854321 1123455679999999999999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
||+++|+|.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 264 Ey~~gg~L~~~l~~~~~--~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 264 TLMNGGDLKFHIYHMGQ--AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp CCCCSCBHHHHHHSSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EcCCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 99999999999976432 2378899999999999999999999 999999999999999999999999999987643
Q ss_pred CCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCccc
Q 037197 857 KNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSI 936 (1009)
Q Consensus 857 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1009)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+...+.... ..+
T Consensus 339 ~-~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~--~~~~~i~~~i~~~~-------~~~ 408 (576)
T 2acx_A 339 G-QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK--IKREEVERLVKEVP-------EEY 408 (576)
T ss_dssp T-CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSC--CCHHHHHHHHHHCC-------CCC
T ss_pred C-ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccc--hhHHHHHHHhhccc-------ccC
Confidence 3 3344568999999999999888999999999999999999999999753221 11122222222211 111
Q ss_pred cccCchHHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 037197 937 AGQCKHVQEEMLLVLRIAVLCTAKLPKGRP-----TMRDVIT 973 (1009)
Q Consensus 937 ~~~~~~~~~~~~~l~~l~~~cl~~dp~~RP-----s~~evl~ 973 (1009)
..... ..+..++.+|++.||++|| ++.|+++
T Consensus 409 p~~~s------~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 409 SERFS------PQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp CTTSC------HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred CccCC------HHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 11111 2456788999999999999 6777764
No 195
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.8e-37 Score=357.48 Aligned_cols=257 Identities=21% Similarity=0.312 Sum_probs=194.0
Q ss_pred HHHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC------ChhhHHHHHHHHHHHhccCCCceeeEEeEEE
Q 037197 694 SEILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN------DIESGDDLFREVSLLGRLRHRNIVRLLGYLH 767 (1009)
Q Consensus 694 ~~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~ 767 (1009)
..+.++|...+.||+|+||.||+|.+..+++.||||++..... .......+.+|++++++++||||+++++++.
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 210 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 210 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 5567889999999999999999999999999999999865321 1112234668999999999999999999986
Q ss_pred cCCeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCC---cEE
Q 037197 768 NETNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANL---EAR 844 (1009)
Q Consensus 768 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~---~~k 844 (1009)
. +..++||||+++|+|.+++..... +++.++..++.|+++||+|||++ +|+||||||+||+++.++ .+|
T Consensus 211 ~-~~~~lv~e~~~~g~L~~~l~~~~~----~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~k 282 (419)
T 3i6u_A 211 A-EDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIK 282 (419)
T ss_dssp S-SEEEEEEECCTTCBGGGGTSSSCC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEE
T ss_pred c-CceEEEEEcCCCCcHHHHHhccCC----CCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEE
Confidence 5 457999999999999999875432 78999999999999999999999 999999999999997544 599
Q ss_pred EcccccceecccCCCceeeecccCcccCCcccC---CCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHH
Q 037197 845 IADFGLARMMLHKNETVSMVAGSYGYIAPEYGY---TLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSM 921 (1009)
Q Consensus 845 l~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 921 (1009)
|+|||+++.... ........||+.|+|||++. ...++.++|||||||++|||++|+.||...... ..+...+
T Consensus 283 l~DFG~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~-~~~~~~i--- 357 (419)
T 3i6u_A 283 ITDFGHSKILGE-TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ-VSLKDQI--- 357 (419)
T ss_dssp ECCSSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS-CCHHHHH---
T ss_pred EeecccceecCC-CccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch-HHHHHHH---
Confidence 999999987643 23334567999999999875 356788999999999999999999999743222 2222222
Q ss_pred HhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 922 IKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
..+.. ...+..... ....+.+++.+|++.||++||++.|+++
T Consensus 358 -~~~~~---~~~~~~~~~------~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 358 -TSGKY---NFIPEVWAE------VSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp -HTTCC---CCCHHHHTT------SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -hcCCC---CCCchhhcc------cCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 11110 011111111 1234667899999999999999999986
No 196
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.2e-36 Score=344.35 Aligned_cols=199 Identities=25% Similarity=0.317 Sum_probs=175.2
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccC-----CCceeeEEeEEEcCC
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLR-----HRNIVRLLGYLHNET 770 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----Hpniv~l~~~~~~~~ 770 (1009)
+.++|+..+.||+|+||.||+|++..+++.||||++... .........|+++++.+. ||||+++++++...+
T Consensus 33 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~ 109 (360)
T 3llt_A 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI---KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD 109 (360)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT
T ss_pred ecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc---hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC
Confidence 456799999999999999999999999999999998532 344556668999999986 999999999999999
Q ss_pred eEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCC-----------
Q 037197 771 NVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDA----------- 839 (1009)
Q Consensus 771 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~----------- 839 (1009)
..++||||+ +++|.+++...... .+++..+..++.||+.||+|||+. +|+||||||+||+++.
T Consensus 110 ~~~lv~e~~-~~~L~~~~~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~ 183 (360)
T 3llt_A 110 HMCLIFEPL-GPSLYEIITRNNYN--GFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVR 183 (360)
T ss_dssp EEEEEECCC-CCBHHHHHHHTTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEE
T ss_pred eeEEEEcCC-CCCHHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchh
Confidence 999999999 99999999765422 378889999999999999999999 9999999999999975
Q ss_pred --------------CCcEEEcccccceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCC
Q 037197 840 --------------NLEARIADFGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLD 905 (1009)
Q Consensus 840 --------------~~~~kl~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~ 905 (1009)
++.+||+|||+++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 184 ~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 260 (360)
T 3llt_A 184 RVTDGKKIQIYRTKSTGIKLIDFGCATFKSD---YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260 (360)
T ss_dssp CTTTCCEEEEEEESCCCEEECCCTTCEETTS---CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred cccccccccccccCCCCEEEEeccCceecCC---CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCC
Confidence 78999999999986433 2334578999999999999999999999999999999999999997
Q ss_pred C
Q 037197 906 P 906 (1009)
Q Consensus 906 ~ 906 (1009)
.
T Consensus 261 ~ 261 (360)
T 3llt_A 261 T 261 (360)
T ss_dssp C
T ss_pred C
Confidence 4
No 197
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.8e-37 Score=338.08 Aligned_cols=251 Identities=18% Similarity=0.252 Sum_probs=202.9
Q ss_pred HHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCCeEE
Q 037197 695 EILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 695 ~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~ 773 (1009)
.+.++|+..+.||+|+||.||+|.+..+++.||+|++...........++.+|+..+.++ +||||+++++++.+++..+
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 456789999999999999999999998899999999977655555667788999999999 9999999999999999999
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCC-------------
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDAN------------- 840 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~------------- 840 (1009)
+||||+++++|.+++.........+++..++.++.||++||+|||++ +|+||||||+||+++.+
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---------------
T ss_pred EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccc
Confidence 99999999999999976543334478999999999999999999999 99999999999999844
Q ss_pred ------CcEEEcccccceecccCCCceeeecccCcccCCcccCCC-CCCcccchHhHHHHHHHHHhCCCCCCCCCCCCcc
Q 037197 841 ------LEARIADFGLARMMLHKNETVSMVAGSYGYIAPEYGYTL-KVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKD 913 (1009)
Q Consensus 841 ------~~~kl~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~ 913 (1009)
..+||+|||.+....... ...||+.|+|||...+. .++.++||||||+++|||++|..|+... +
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-----~ 235 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG-----D 235 (289)
T ss_dssp -----CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS-----H
T ss_pred cccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch-----h
Confidence 479999999998764332 23589999999998765 5668999999999999999999776421 1
Q ss_pred HHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 914 IVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
... .+..+. .+.+....+ ..+.+++.+|++.||++||++.|+++
T Consensus 236 ~~~----~~~~~~------~~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 236 QWH----EIRQGR------LPRIPQVLS------QEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp HHH----HHHTTC------CCCCSSCCC------HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHH----HHHcCC------CCCCCcccC------HHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 111 111111 111221221 24567889999999999999999874
No 198
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.2e-36 Score=344.19 Aligned_cols=257 Identities=23% Similarity=0.356 Sum_probs=203.7
Q ss_pred HHHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCC--h----hhHHHHHHHHHHHhcc-CCCceeeEEeEE
Q 037197 694 SEILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDND--I----ESGDDLFREVSLLGRL-RHRNIVRLLGYL 766 (1009)
Q Consensus 694 ~~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~--~----~~~~~~~~E~~~l~~l-~Hpniv~l~~~~ 766 (1009)
..+.++|+..+.||+|+||.||+|.+..+|+.||||++...... . ...+.+.+|+++++++ +||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 44567899999999999999999999988999999998654321 1 1134556899999999 799999999999
Q ss_pred EcCCeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEc
Q 037197 767 HNETNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIA 846 (1009)
Q Consensus 767 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 846 (1009)
......++||||+++++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~ 242 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTEKV----ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLS 242 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEE
Confidence 99999999999999999999996432 378999999999999999999999 99999999999999999999999
Q ss_pred ccccceecccCCCceeeecccCcccCCcccC------CCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHH
Q 037197 847 DFGLARMMLHKNETVSMVAGSYGYIAPEYGY------TLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLS 920 (1009)
Q Consensus 847 DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 920 (1009)
|||++...... .......||+.|+|||++. ...++.++|||||||++|||++|+.||... .......
T Consensus 243 DfG~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~-----~~~~~~~- 315 (365)
T 2y7j_A 243 DFGFSCHLEPG-EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR-----RQILMLR- 315 (365)
T ss_dssp CCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHH-
T ss_pred ecCcccccCCC-cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCC-----CHHHHHH-
Confidence 99999876433 2334567999999999865 335889999999999999999999999632 1111211
Q ss_pred HHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 921 MIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.+..+.. ....+... . ....+.+++.+|++.||++||++.|+++
T Consensus 316 ~i~~~~~--~~~~~~~~-~------~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 316 MIMEGQY--QFSSPEWD-D------RSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHHHTCC--CCCHHHHS-S------SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHhCCC--CCCCcccc-c------CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111110 00001000 1 1124667899999999999999999986
No 199
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=6.6e-37 Score=350.24 Aligned_cols=251 Identities=24% Similarity=0.319 Sum_probs=190.4
Q ss_pred HhcCCcC-ceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhc-cCCCceeeEEeEEEc----CC
Q 037197 697 LACVKES-NIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGR-LRHRNIVRLLGYLHN----ET 770 (1009)
Q Consensus 697 ~~~~~~~-~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~Hpniv~l~~~~~~----~~ 770 (1009)
.+.|... +.||+|+||+||+|.+..+++.||||++.. .....+|++++.+ .+||||+++++++.. ..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~ 132 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRK 132 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCc
Confidence 3455554 689999999999999999999999999843 2345688888744 589999999998865 56
Q ss_pred eEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCC---CCcEEEcc
Q 037197 771 NVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDA---NLEARIAD 847 (1009)
Q Consensus 771 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~D 847 (1009)
..|+||||+++|+|.+++..... ..+++.++..|+.||+.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~D 207 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 207 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECC
T ss_pred EEEEEEEeCCCCcHHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEe
Confidence 78999999999999999976432 2378999999999999999999998 9999999999999998 78999999
Q ss_pred cccceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCC--ccHHHHHHHHHhhc
Q 037197 848 FGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGS--KDIVEWVLSMIKSN 925 (1009)
Q Consensus 848 fGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~--~~~~~~~~~~~~~~ 925 (1009)
||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......+ ..+
T Consensus 208 FG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i----~~~ 282 (400)
T 1nxk_A 208 FGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----RMG 282 (400)
T ss_dssp CTTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHH----HHT
T ss_pred cccccccCCC-CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHH----HcC
Confidence 9999865432 23345678999999999998899999999999999999999999997543221 1122221 111
Q ss_pred cccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 926 KAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.. ....+.. .... .++.+++.+||+.||++|||+.|+++
T Consensus 283 ~~--~~~~~~~----~~~s---~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 283 QY--EFPNPEW----SEVS---EEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp CC--CCCTTTT----TTSC---HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cc--cCCCccc----ccCC---HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 10 0011111 1111 24567889999999999999999986
No 200
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=7.6e-37 Score=353.92 Aligned_cols=202 Identities=26% Similarity=0.372 Sum_probs=172.9
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcC-----C
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNE-----T 770 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~-----~ 770 (1009)
+.++|+..+.||+|+||.||+|.+..+++.||||++..........+++.+|++++++++||||+++++++... .
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 35679999999999999999999999999999999976655566677888999999999999999999998766 5
Q ss_pred eEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccc
Q 037197 771 NVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGL 850 (1009)
Q Consensus 771 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGl 850 (1009)
..|+||||++ ++|.++++... .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~~~----~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGl 175 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKTPI----FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGL 175 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEecCC-cCHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCC
Confidence 7899999996 69999997643 278999999999999999999999 999999999999999999999999999
Q ss_pred ceecccCCC----------------------ceeeecccCcccCCccc-CCCCCCcccchHhHHHHHHHHHhCCCCCC
Q 037197 851 ARMMLHKNE----------------------TVSMVAGSYGYIAPEYG-YTLKVDEKSDIYSFGVVLLELLTGKMPLD 905 (1009)
Q Consensus 851 s~~~~~~~~----------------------~~~~~~gt~~y~aPE~~-~~~~~~~~sDv~SlGvvl~elltg~~Pf~ 905 (1009)
++....... ......||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp CEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 987643321 13556789999999985 56679999999999999999998666654
No 201
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=9e-37 Score=336.80 Aligned_cols=253 Identities=22% Similarity=0.303 Sum_probs=202.3
Q ss_pred HHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEE
Q 037197 695 EILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMM 774 (1009)
Q Consensus 695 ~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 774 (1009)
.+.++|+..+.||+|+||.||+|++..+++.||+|++..... .....+.+|++++++++||||+++++++.+.+..++
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (304)
T 2jam_A 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA--FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYL 83 (304)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred chhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc--cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEE
Confidence 456789999999999999999999998899999999965422 233456699999999999999999999999999999
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEe---CCCCcEEEcccccc
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILL---DANLEARIADFGLA 851 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~DfGls 851 (1009)
||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 84 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~ 156 (304)
T 2jam_A 84 VMQLVSGGELFDRILERG----VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLS 156 (304)
T ss_dssp EECCCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTT
T ss_pred EEEcCCCccHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcc
Confidence 999999999999986543 278899999999999999999999 99999999999999 77889999999999
Q ss_pred eecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccc
Q 037197 852 RMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEA 931 (1009)
Q Consensus 852 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1009)
...... ......|++.|+|||...+..++.++||||+|+++|||++|+.||... ........ +..+.. .
T Consensus 157 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----~~~~~~~~-i~~~~~--~- 225 (304)
T 2jam_A 157 KMEQNG--IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE-----TESKLFEK-IKEGYY--E- 225 (304)
T ss_dssp CCCCCB--TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHHHH-HHHCCC--C-
T ss_pred eecCCC--ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCC-----CHHHHHHH-HHcCCC--C-
Confidence 754322 223456899999999999889999999999999999999999999632 11222222 222211 0
Q ss_pred cCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 932 LDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
......... ...+.+++.+|++.||++||++.|+++
T Consensus 226 ~~~~~~~~~------~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 226 FESPFWDDI------SESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp CCTTTTTTS------CHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCccccccC------CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111111111 124567889999999999999999986
No 202
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.1e-37 Score=346.25 Aligned_cols=259 Identities=22% Similarity=0.316 Sum_probs=196.3
Q ss_pred HhcCCcC-ceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCCeEEE
Q 037197 697 LACVKES-NIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNETNVMM 774 (1009)
Q Consensus 697 ~~~~~~~-~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~l 774 (1009)
.+.|+.. +.||+|+||.||+|.+..+++.||||++.... ......+.+|+++++++ +||||+++++++.+++..++
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~l 88 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL 88 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 4567764 78999999999999999889999999996542 23456778999999985 79999999999999999999
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCc---EEEcccccc
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLE---ARIADFGLA 851 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~---~kl~DfGls 851 (1009)
||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 89 v~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~ 161 (316)
T 2ac3_A 89 VFEKMRGGSILSHIHKRR----HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLG 161 (316)
T ss_dssp EEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred EEEcCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence 999999999999997543 278899999999999999999999 9999999999999998776 999999998
Q ss_pred eecccCCC-------ceeeecccCcccCCcccCC-----CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCc-------
Q 037197 852 RMMLHKNE-------TVSMVAGSYGYIAPEYGYT-----LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSK------- 912 (1009)
Q Consensus 852 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~-----~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~------- 912 (1009)
........ ......||+.|+|||++.. ..++.++|||||||++|||++|+.||........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 241 (316)
T 2ac3_A 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA 241 (316)
T ss_dssp C-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----C
T ss_pred cccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccccc
Confidence 76532211 1223468999999998764 4578999999999999999999999975432210
Q ss_pred --cHHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 913 --DIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 913 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.....+...+..+.. ......... ....+.+++.+|++.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~i~~~~~---~~~~~~~~~------~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 242 CPACQNMLFESIQEGKY---EFPDKDWAH------ISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp CHHHHHHHHHHHHHCCC---CCCHHHHTT------SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred chhHHHHHHHHHhccCc---ccCchhccc------CCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 001112222222210 000000000 1134668899999999999999999987
No 203
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.5e-37 Score=344.33 Aligned_cols=264 Identities=21% Similarity=0.357 Sum_probs=209.7
Q ss_pred HhcCCcCceeccCCceEEEEEEEC-----CCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCe
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFH-----RPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETN 771 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~ 771 (1009)
.++|+..+.||+|+||.||+|.+. .+++.||+|++.... .......+.+|++++++++||||+++++++.+.+.
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 102 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 102 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCc
Confidence 467899999999999999999876 357889999996432 33445567799999999999999999999999999
Q ss_pred EEEEEeccCCCChhhhhcCCccc------cccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEE
Q 037197 772 VMMVYDYMPNDSLGEALHGKEAG------KLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARI 845 (1009)
Q Consensus 772 ~~lV~E~~~~gsL~~~l~~~~~~------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl 845 (1009)
.++||||+++|+|.++++..... ...+++..++.++.|+++||+|||++ +|+||||||+||+++.++.+||
T Consensus 103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl 179 (322)
T 1p4o_A 103 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 179 (322)
T ss_dssp CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEE
T ss_pred cEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEE
Confidence 99999999999999999753211 12368899999999999999999999 9999999999999999999999
Q ss_pred cccccceecccCCC--ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHH
Q 037197 846 ADFGLARMMLHKNE--TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMI 922 (1009)
Q Consensus 846 ~DfGls~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~ 922 (1009)
+|||+++....... ......+|+.|+|||+..+..++.++||||||+++|||++ |+.||... ....... .+
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-----~~~~~~~-~~ 253 (322)
T 1p4o_A 180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-----SNEQVLR-FV 253 (322)
T ss_dssp CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-----CHHHHHH-HH
T ss_pred CcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC-----CHHHHHH-HH
Confidence 99999986543332 1223456889999999888889999999999999999999 89998632 1122222 22
Q ss_pred hhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 923 KSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
..+.. +....... ..+.+++.+|++.||++||++.|+++.|+++....
T Consensus 254 ~~~~~------~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~ 301 (322)
T 1p4o_A 254 MEGGL------LDKPDNCP------DMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 301 (322)
T ss_dssp HTTCC------CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred HcCCc------CCCCCCCC------HHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccC
Confidence 21110 01111111 24567889999999999999999999999987643
No 204
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.1e-37 Score=344.03 Aligned_cols=263 Identities=24% Similarity=0.337 Sum_probs=208.8
Q ss_pred HhcCCcCceeccCCceEEEEEEE-----CCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCC
Q 037197 697 LACVKESNIIGMGGNGIVYKAEF-----HRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNET 770 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~ 770 (1009)
.++|+..+.||+|+||.||+|.+ ..+++.||||++.... .......+.+|+++++++ +||||+++++++...+
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 104 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 104 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC-CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCC
Confidence 46789999999999999999985 3567899999996542 334456677999999999 7999999999987654
Q ss_pred -eEEEEEeccCCCChhhhhcCCccc------------cccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEe
Q 037197 771 -NVMMVYDYMPNDSLGEALHGKEAG------------KLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILL 837 (1009)
Q Consensus 771 -~~~lV~E~~~~gsL~~~l~~~~~~------------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll 837 (1009)
..++||||+++++|.+++...... +..+++..++.++.|+++||+|||+. +|+||||||+||++
T Consensus 105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~ 181 (316)
T 2xir_A 105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILL 181 (316)
T ss_dssp SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEE
Confidence 589999999999999999765432 12278999999999999999999999 99999999999999
Q ss_pred CCCCcEEEcccccceecccCCC--ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccH
Q 037197 838 DANLEARIADFGLARMMLHKNE--TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDI 914 (1009)
Q Consensus 838 ~~~~~~kl~DfGls~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~ 914 (1009)
+.++.+||+|||+++....... ......+|+.|+|||+..+..++.++||||||+++|||++ |+.||...... .
T Consensus 182 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~-- 258 (316)
T 2xir_A 182 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-E-- 258 (316)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS-H--
T ss_pred CCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchh-H--
Confidence 9999999999999987644332 2233567889999999988889999999999999999998 99999743221 1
Q ss_pred HHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCC
Q 037197 915 VEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKP 980 (1009)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 980 (1009)
.+...+..+.. ........ ..+.+++.+|++.||++||++.|+++.|+.+..
T Consensus 259 --~~~~~~~~~~~------~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 259 --EFCRRLKEGTR------MRAPDYTT------PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp --HHHHHHHHTCC------CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --HHHHHhccCcc------CCCCCCCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 12222222211 11111111 245678899999999999999999999998764
No 205
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=4.9e-37 Score=335.44 Aligned_cols=248 Identities=25% Similarity=0.372 Sum_probs=202.2
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCC-hhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDND-IESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
++|+..+.||+|+||.||+|.+..+++.||+|++...... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 5688899999999999999999999999999998543211 122355679999999999999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
||+++++|.+++.... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG----RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp CCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 9999999999997543 278899999999999999999998 999999999999999999999999999976532
Q ss_pred CCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCccc
Q 037197 857 KNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSI 936 (1009)
Q Consensus 857 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1009)
. ......|++.|+|||...+..++.++||||||+++|+|++|+.||... ............. ..+
T Consensus 167 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----~~~~~~~~~~~~~--------~~~ 231 (284)
T 2vgo_A 167 L--RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP-----SHTETHRRIVNVD--------LKF 231 (284)
T ss_dssp S--CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHTTC--------CCC
T ss_pred c--ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCC-----CHhHHHHHHhccc--------cCC
Confidence 2 233457899999999999888999999999999999999999999732 1122222221111 111
Q ss_pred cccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 937 AGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 937 ~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
....+ ..+.+++.+|++.||++||++.|+++
T Consensus 232 ~~~~~------~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 232 PPFLS------DGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp CTTSC------HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCcCC------HHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 11111 24567889999999999999999986
No 206
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=5.1e-37 Score=361.59 Aligned_cols=255 Identities=25% Similarity=0.357 Sum_probs=206.2
Q ss_pred HHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCC-hhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEE
Q 037197 695 EILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDND-IESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 695 ~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 773 (1009)
.+.++|+..+.||+|+||.||+|.+..+++.||||++...... ......+.+|++++++++||||+++++++.+....+
T Consensus 23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 102 (484)
T 3nyv_A 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY 102 (484)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 3567899999999999999999999999999999998655432 334567779999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEe---CCCCcEEEccccc
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILL---DANLEARIADFGL 850 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~DfGl 850 (1009)
+||||+.+|+|.+++..... +++..+..++.||+.||+|||++ +|+||||||+||++ +.++.+||+|||+
T Consensus 103 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~ 175 (484)
T 3nyv_A 103 LVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGL 175 (484)
T ss_dssp EEECCCCSCBHHHHHHTCSC----CBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTH
T ss_pred EEEecCCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeee
Confidence 99999999999999876543 78999999999999999999999 99999999999999 5678999999999
Q ss_pred ceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccc
Q 037197 851 ARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDE 930 (1009)
Q Consensus 851 s~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1009)
++.+.... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||... ...+.+... ..+.. .
T Consensus 176 a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~~~i-~~~~~--~ 245 (484)
T 3nyv_A 176 STHFEASK-KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGA-----NEYDILKKV-EKGKY--T 245 (484)
T ss_dssp HHHBCCCC-SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHH-HHCCC--C
T ss_pred eEEccccc-ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHH-HcCCC--C
Confidence 98664332 3344579999999998765 6899999999999999999999999732 222222222 22211 0
Q ss_pred ccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 931 ALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
...+... .. ...+.+++.+|++.||++|||+.|+++
T Consensus 246 ~~~~~~~----~~---s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 246 FELPQWK----KV---SESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp CCSGGGG----GS---CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCcccc----cC---CHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 1111111 11 124567889999999999999999985
No 207
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=9e-37 Score=360.87 Aligned_cols=255 Identities=26% Similarity=0.346 Sum_probs=201.6
Q ss_pred HHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCCh-----------hhHHHHHHHHHHHhccCCCceeeEE
Q 037197 695 EILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDI-----------ESGDDLFREVSLLGRLRHRNIVRLL 763 (1009)
Q Consensus 695 ~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~Hpniv~l~ 763 (1009)
.+.++|+..+.||+|+||+||+|.+..+++.||+|++....... ...+.+.+|++++++++||||++++
T Consensus 33 ~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~ 112 (504)
T 3q5i_A 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF 112 (504)
T ss_dssp CGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred CcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 35678999999999999999999999999999999997543221 2345677999999999999999999
Q ss_pred eEEEcCCeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCC--
Q 037197 764 GYLHNETNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANL-- 841 (1009)
Q Consensus 764 ~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~-- 841 (1009)
+++.++...++||||+++|+|.+++..... +++..+..++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 113 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~----~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 185 (504)
T 3q5i_A 113 DVFEDKKYFYLVTEFYEGGELFEQIINRHK----FDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSL 185 (504)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCC
T ss_pred EEEEcCCEEEEEEecCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCC
Confidence 999999999999999999999999865432 88999999999999999999999 999999999999998776
Q ss_pred -cEEEcccccceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHH
Q 037197 842 -EARIADFGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLS 920 (1009)
Q Consensus 842 -~~kl~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~ 920 (1009)
.+||+|||++...... .......||+.|+|||++. ..++.++||||+||++|+|++|+.||... ...+.+..
T Consensus 186 ~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~~~ 258 (504)
T 3q5i_A 186 LNIKIVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQ-----NDQDIIKK 258 (504)
T ss_dssp SSEEECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHH
T ss_pred ccEEEEECCCCEEcCCC-CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHH
Confidence 6999999999876433 3334567999999999876 46899999999999999999999999732 22222222
Q ss_pred HHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 921 MIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
+..+.. ..+...... ...++.+++.+|++.||++|||+.|+++
T Consensus 259 -i~~~~~---~~~~~~~~~------~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 259 -VEKGKY---YFDFNDWKN------ISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp -HHHCCC---CCCHHHHTT------SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -HHcCCC---CCCccccCC------CCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 222211 011000001 1124667889999999999999999985
No 208
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.8e-37 Score=338.42 Aligned_cols=257 Identities=23% Similarity=0.296 Sum_probs=189.4
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
.++|+..+.||+|+||.||+|.+..+++.||+|++............+.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 35688899999999999999999999999999999655433333333445666688899999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
||++ |+|.+++.........+++..++.++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 9997 5888887653333345899999999999999999999852 899999999999999999999999999987643
Q ss_pred CCCceeeecccCcccCCccc----CCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccccc
Q 037197 857 KNETVSMVAGSYGYIAPEYG----YTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEAL 932 (1009)
Q Consensus 857 ~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1009)
. .......||+.|+|||++ ....++.++||||+|+++|||++|+.||..... ....+......... ...
T Consensus 163 ~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~--~~~ 235 (290)
T 3fme_A 163 D-VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT----PFQQLKQVVEEPSP--QLP 235 (290)
T ss_dssp --------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC----HHHHHHHHHHSCCC--CCC
T ss_pred c-ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc----hHHHHHHHhccCCC--Ccc
Confidence 3 223344689999999985 566789999999999999999999999974222 22222222222211 000
Q ss_pred CccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 933 DPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 933 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
. ... ..++.+++.+|++.||++|||+.|+++
T Consensus 236 ~----~~~------~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 236 A----DKF------SAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp T----TTS------CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred c----ccC------CHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 0 111 124667889999999999999999987
No 209
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.2e-36 Score=334.35 Aligned_cols=263 Identities=17% Similarity=0.186 Sum_probs=206.6
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEE-EcCCeEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYL-HNETNVMMV 775 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~-~~~~~~~lV 775 (1009)
.++|+..+.||+|+||.||+|++..+++.||||++..... ...+.+|++++++++|++++..+.++ .++...++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEE
Confidence 4678899999999999999999998999999999855422 24577999999999988866666554 667788999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeC---CCCcEEEcccccce
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLD---ANLEARIADFGLAR 852 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~---~~~~~kl~DfGls~ 852 (1009)
|||+ +++|.+++..... .+++.+++.++.|+++||+|||++ +|+||||||+||+++ .++.+||+|||++.
T Consensus 84 ~e~~-~~~L~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 156 (296)
T 3uzp_A 84 MELL-GPSLEDLFNFCSR---KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EECC-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEec-CCCHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcc
Confidence 9999 9999999974322 388999999999999999999999 999999999999994 78899999999998
Q ss_pred ecccCCC-------ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCC-CccHHHHHHHHHhh
Q 037197 853 MMLHKNE-------TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGG-SKDIVEWVLSMIKS 924 (1009)
Q Consensus 853 ~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~-~~~~~~~~~~~~~~ 924 (1009)
....... ......||+.|+|||...+..++.++||||||+++|||++|+.||...... .......+......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 236 (296)
T 3uzp_A 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS 236 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccC
Confidence 7654432 124567899999999999989999999999999999999999999754322 12222222221111
Q ss_pred ccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 925 NKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
.. . +.+...++ ..+.+++.+|++.||++||++.|+++.|+++..+.
T Consensus 237 ~~--~----~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 237 TP--I----EVLCKGYP------SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp SC--H----HHHTTTSC------HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred Cc--h----HHHHhhCC------HHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 10 0 00111111 24667889999999999999999999999986544
No 210
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=9.1e-37 Score=338.52 Aligned_cols=253 Identities=23% Similarity=0.342 Sum_probs=200.1
Q ss_pred HHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEE
Q 037197 695 EILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMM 774 (1009)
Q Consensus 695 ~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 774 (1009)
...+.|+..+.||+|+||.||+|.+..+++.||+|++.... ....+.+|++++++++||||+++++++.+.+..++
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 34567899999999999999999999999999999986532 24567799999999999999999999999999999
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceec
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMM 854 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~ 854 (1009)
||||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 102 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 175 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLRN---KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175 (314)
T ss_dssp EEECCTTEEHHHHHHHHT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EeecCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhh
Confidence 999999999999986322 2378999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCc
Q 037197 855 LHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDP 934 (1009)
Q Consensus 855 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1009)
...........|++.|+|||...+..++.++||||||+++|+|++|+.||.... ....+.... .... .....
T Consensus 176 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~-~~~~-~~~~~- 247 (314)
T 3com_A 176 TDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH-----PMRAIFMIP-TNPP-PTFRK- 247 (314)
T ss_dssp BTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHH-HSCC-CCCSS-
T ss_pred hhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHh-cCCC-cccCC-
Confidence 554444455678999999999988889999999999999999999999997321 111111111 1110 00000
Q ss_pred cccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 935 SIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 935 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.... ...+.+++.+|++.||++||++.|+++
T Consensus 248 --~~~~------~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 248 --PELW------SDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp --GGGS------CHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --cccC------CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1111 124667889999999999999999975
No 211
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=358.18 Aligned_cols=321 Identities=21% Similarity=0.187 Sum_probs=207.4
Q ss_pred ceeeeccccccccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEeccCccccccCcccCCCCCCcEEEcccC
Q 037197 189 KFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKN 268 (1009)
Q Consensus 189 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n 268 (1009)
+.++.++++++ .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 56777777777 5666553 46777777777777766777777777777777777777766777777777777777777
Q ss_pred CcCCCCCcccccccccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCc
Q 037197 269 NFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPM 348 (1009)
Q Consensus 269 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 348 (1009)
.+++..+..|.++++|++|+|++|++++..+..|..+++|++|++++|.+++..+..|.++++|+.|++++|.+++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 77755555566667777777777766665566666666666666666666666666666666666666666655544444
Q ss_pred cccCCCCCceeeccCccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCccccccCCccCCCCcc
Q 037197 349 RLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSL 428 (1009)
Q Consensus 349 ~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L 428 (1009)
.+.. +++|+.|++++|.+.+..+..+..+++|+.|++++|.+.+.+|..+....+|
T Consensus 171 ~l~~------------------------l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L 226 (477)
T 2id5_A 171 ALSH------------------------LHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNL 226 (477)
T ss_dssp HHTT------------------------CTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCC
T ss_pred Hhcc------------------------cCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccc
Confidence 4444 4455555555555554444455555556666666655555555555555566
Q ss_pred cEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecC
Q 037197 429 QRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSN 508 (1009)
Q Consensus 429 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N 508 (1009)
+.|+|++|++++..+..+..+++|+.|+|++|+++++.+..|..+++|+.|++++|++++..|..|..+++|+.|||++|
T Consensus 227 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 306 (477)
T 2id5_A 227 TSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGN 306 (477)
T ss_dssp SEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSS
T ss_pred cEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCC
Confidence 66777776666433345666666666666666666666666666666666666666666666666666666777777777
Q ss_pred CCCCCCCccccccccceeeeecCccccc
Q 037197 509 SLSGEIPASIASCEKLVSLNLRNNRFSG 536 (1009)
Q Consensus 509 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 536 (1009)
+|++..+..|..+++|+.|+|++|.++.
T Consensus 307 ~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 307 QLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp CCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred cCceeCHhHcCCCcccCEEEccCCCccC
Confidence 7766555666666667777777766654
No 212
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.9e-37 Score=351.11 Aligned_cols=250 Identities=22% Similarity=0.349 Sum_probs=196.8
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccC--CCceeeEEeEEEcCCeEEEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLR--HRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--Hpniv~l~~~~~~~~~~~lV 775 (1009)
..|+..+.||+|+||.||+|.+.. ++.||||++..........+.+.+|++++++++ ||||+++++++..++..++|
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 458899999999999999999876 889999999766555566677889999999996 59999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
|| +.+++|.+++.... .+++.++..++.||++||+|||+. +|+||||||+||+++ ++.+||+|||+++.+.
T Consensus 135 ~E-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EE-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred Ee-cCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 99 56899999997653 378888999999999999999998 999999999999995 5899999999998764
Q ss_pred cCCC--ceeeecccCcccCCcccCC-----------CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHH
Q 037197 856 HKNE--TVSMVAGSYGYIAPEYGYT-----------LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMI 922 (1009)
Q Consensus 856 ~~~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 922 (1009)
.... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||.... .....+....
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~----~~~~~~~~~~ 281 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII----NQISKLHAII 281 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC----CHHHHHHHHH
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh----HHHHHHHHHh
Confidence 3322 2334579999999998754 468899999999999999999999997422 1122222222
Q ss_pred hhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 923 KSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.... ...+.... ...+.+++.+||+.||++||++.|+++
T Consensus 282 ~~~~------~~~~~~~~------~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 282 DPNH------EIEFPDIP------EKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp CTTS------CCCCCCCS------CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred Cccc------cCCCCccc------hHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 1111 11111111 124567889999999999999999985
No 213
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.9e-37 Score=334.75 Aligned_cols=258 Identities=23% Similarity=0.362 Sum_probs=204.4
Q ss_pred cCCcCc-eeccCCceEEEEEEEC--CCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 699 CVKESN-IIGMGGNGIVYKAEFH--RPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 699 ~~~~~~-~iG~G~~g~Vyk~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
+|...+ .||+|+||.||+|.+. .+++.||||++... ......+.+.+|++++++++||||+++++++. .+..++|
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~lv 87 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLV 87 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc-cchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcEEE
Confidence 445555 8999999999999864 45788999999654 23445667779999999999999999999994 5568999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
|||+++++|.+++.... ..+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EECCTTEEHHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEeCCCCCHHHHHHhCC---ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 99999999999996542 2378999999999999999999999 99999999999999999999999999998764
Q ss_pred cCCCc---eeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccccc
Q 037197 856 HKNET---VSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEA 931 (1009)
Q Consensus 856 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1009)
..... .....+|+.|+|||+.....++.++||||||+++|||++ |+.||..... .+.. ..+..+.
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~----~~i~~~~----- 230 (287)
T 1u59_A 162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVM----AFIEQGK----- 230 (287)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--HHHH----HHHHTTC-----
T ss_pred cCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--HHHH----HHHhcCC-----
Confidence 43322 223346789999999888889999999999999999999 9999974321 1222 2222221
Q ss_pred cCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 932 LDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
.+.+...++ ..+.+++.+|++.||++||++.|+++.|+.+....
T Consensus 231 -~~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 274 (287)
T 1u59_A 231 -RMECPPECP------PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 274 (287)
T ss_dssp -CCCCCTTCC------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -cCCCCCCcC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 111111111 24667889999999999999999999999986543
No 214
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=4.6e-37 Score=359.32 Aligned_cols=196 Identities=24% Similarity=0.383 Sum_probs=158.5
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEc-----CCe
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHN-----ETN 771 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~-----~~~ 771 (1009)
.++|+..+.||+|+||.||+|.+..+++.||||++.....+....+++.+|++++++++||||+++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 467899999999999999999999999999999997665556667788899999999999999999999843 357
Q ss_pred EEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccc
Q 037197 772 VMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLA 851 (1009)
Q Consensus 772 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls 851 (1009)
.|+||||+ +++|.++++... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTPV----YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecc-ccchhhhcccCC----CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 89999998 578999987543 288999999999999999999999 9999999999999999999999999999
Q ss_pred eecccCC---------------------------CceeeecccCcccCCccc-CCCCCCcccchHhHHHHHHHHHhC
Q 037197 852 RMMLHKN---------------------------ETVSMVAGSYGYIAPEYG-YTLKVDEKSDIYSFGVVLLELLTG 900 (1009)
Q Consensus 852 ~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDv~SlGvvl~elltg 900 (1009)
+...... ......+||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 8764221 123345789999999975 566799999999999999999993
No 215
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.7e-36 Score=330.25 Aligned_cols=256 Identities=27% Similarity=0.425 Sum_probs=204.3
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
.++|+..+.||+|+||.||+|.+.. +..||+|++.... ...+.+.+|++++++++||||+++++++.+ +..++||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~ 86 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETT-TEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcC-CcEEEEEEecCCc---ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEE
Confidence 3568889999999999999999875 7789999986542 234667799999999999999999999874 4589999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
||+++++|.+++.... ...+++.+++.++.|+++||+|||+. +|+||||||+||++++++.+||+|||.+.....
T Consensus 87 e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 87 EYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp ECCTTCBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred ecCCCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 9999999999996542 12378899999999999999999999 999999999999999999999999999987644
Q ss_pred CCC-ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccccccCc
Q 037197 857 KNE-TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDP 934 (1009)
Q Consensus 857 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1009)
... ......+++.|+|||......++.++||||||+++|||++ |+.||... ...+.... +..+. ..
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-----~~~~~~~~-~~~~~------~~ 229 (279)
T 1qpc_A 162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-----TNPEVIQN-LERGY------RM 229 (279)
T ss_dssp SCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC-----CHHHHHHH-HHTTC------CC
T ss_pred cccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCccc-----CHHHHHHH-Hhccc------CC
Confidence 321 1223346778999999888889999999999999999999 99999732 11222222 22211 11
Q ss_pred cccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCC
Q 037197 935 SIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKP 980 (1009)
Q Consensus 935 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 980 (1009)
......+ ..+.+++.+|++.||++||++.++++.|+++..
T Consensus 230 ~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 269 (279)
T 1qpc_A 230 VRPDNCP------EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (279)
T ss_dssp CCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCccccc------HHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 1111111 246678899999999999999999999998864
No 216
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=347.79 Aligned_cols=266 Identities=24% Similarity=0.360 Sum_probs=196.9
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHH--HhccCCCceeeEEeEEEc-----CC
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSL--LGRLRHRNIVRLLGYLHN-----ET 770 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~--l~~l~Hpniv~l~~~~~~-----~~ 770 (1009)
++|+..+.||+|+||.||+|++ +++.||||++... ....+..|.++ ++.++||||+++++++.. ..
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFA-----NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred HHhheeeecccCCCeEEEEEEE--CCeEEEEEEeecc-----chhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 5688899999999999999987 4789999998532 22334444444 556899999999986532 23
Q ss_pred eEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcC------CCCeEEeccCCCcEEeCCCCcEE
Q 037197 771 NVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDC------QPPVIHRDIKSNNILLDANLEAR 844 (1009)
Q Consensus 771 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~------~~~ivH~dlk~~NIll~~~~~~k 844 (1009)
.+++||||+++|+|.+++.... .++..++.++.|+++||+|||+.+ .++|+||||||+||+++.++.+|
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSLHT-----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred eEEEEEecCCCCcHHHHHhhcc-----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence 5789999999999999996543 478889999999999999999762 33899999999999999999999
Q ss_pred EcccccceecccCC--------CceeeecccCcccCCcccCC-------CCCCcccchHhHHHHHHHHHhCCCCCCCCCC
Q 037197 845 IADFGLARMMLHKN--------ETVSMVAGSYGYIAPEYGYT-------LKVDEKSDIYSFGVVLLELLTGKMPLDPAFG 909 (1009)
Q Consensus 845 l~DfGls~~~~~~~--------~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~ 909 (1009)
|+|||+++.+.... .......||+.|+|||++.+ ..++.++|||||||++|||++|..||.....
T Consensus 161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~ 240 (336)
T 3g2f_A 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240 (336)
T ss_dssp ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSC
T ss_pred EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccc
Confidence 99999998764322 12224568999999998876 4567899999999999999999877643222
Q ss_pred CCc------------cHHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhh
Q 037197 910 GSK------------DIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGE 977 (1009)
Q Consensus 910 ~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~ 977 (1009)
... .....+...... ....+.+.............+.+++.+||+.||++|||++|+++.|++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ 315 (336)
T 3g2f_A 241 VPEYQMAFQTEVGNHPTFEDMQVLVSR-----EKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAE 315 (336)
T ss_dssp CCCCCCTTHHHHCSSCCHHHHHHHHTT-----SCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred hhHHHHhhhcccCCCchHHHHHhhhcc-----cccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHH
Confidence 111 001111111111 112233333222222344467889999999999999999999999998
Q ss_pred cCC
Q 037197 978 AKP 980 (1009)
Q Consensus 978 ~~~ 980 (1009)
+..
T Consensus 316 ll~ 318 (336)
T 3g2f_A 316 LMM 318 (336)
T ss_dssp HHH
T ss_pred HHH
Confidence 753
No 217
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=3.8e-37 Score=335.76 Aligned_cols=260 Identities=22% Similarity=0.377 Sum_probs=203.0
Q ss_pred HhcCCcCceeccCCceEEEEEEECC---CCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHR---PHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 773 (1009)
.++|+..+.||+|+||.||+|.+.. ++..||+|.+.... .....+.+.+|++++++++||||+++++++.++ ..+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~ 88 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTW 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCE
Confidence 3568888999999999999998653 34579999986542 344556777999999999999999999998754 568
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
+||||+++++|.+++.... ..+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 89 ~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNK---NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEEecCCCCCHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 9999999999999996532 2378899999999999999999999 999999999999999999999999999987
Q ss_pred cccCCC-ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccccc
Q 037197 854 MLHKNE-TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEA 931 (1009)
Q Consensus 854 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1009)
...... ......+++.|+|||......++.++||||||+++|||++ |+.||..... .+....+ ..+..
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~--~~~~~~~----~~~~~---- 232 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN--KDVIGVL----EKGDR---- 232 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG--GGHHHHH----HHTCC----
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh--HHHHHHH----hcCCC----
Confidence 644332 2234456789999999888889999999999999999998 9999964322 2222222 11110
Q ss_pred cCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 932 LDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
......++ ..+.+++.+|++.||++||++.|+++.|+++....
T Consensus 233 --~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 233 --LPKPDLCP------PVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp --CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --CCCCCCCC------HHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 01111111 24567889999999999999999999999886543
No 218
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3e-37 Score=349.38 Aligned_cols=258 Identities=26% Similarity=0.410 Sum_probs=194.3
Q ss_pred cCCcCceeccCCceEEEEEEECCC---CeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEc-CCeEEE
Q 037197 699 CVKESNIIGMGGNGIVYKAEFHRP---HMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHN-ETNVMM 774 (1009)
Q Consensus 699 ~~~~~~~iG~G~~g~Vyk~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~-~~~~~l 774 (1009)
.|+..+.||+|+||.||+|.+..+ +..||||.+... ......+++.+|+.++++++||||+++++++.+ ++..++
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC-SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 466778999999999999987532 356899998543 334456778899999999999999999998754 567899
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceec
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMM 854 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~ 854 (1009)
||||+++|+|.++++.... .+++.+++.++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 169 v~e~~~~g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM 242 (373)
T ss_dssp EEECCTTCBHHHHHHCTTC---CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEECCCCCCHHHHHhhccc---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccc
Confidence 9999999999999975432 378889999999999999999999 9999999999999999999999999999865
Q ss_pred ccCCC----ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccc
Q 037197 855 LHKNE----TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQD 929 (1009)
Q Consensus 855 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (1009)
..... ......+++.|+|||...+..++.++||||||+++|||++ |.+||..... .+....+ ..+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~--~~~~~~~----~~~~~-- 314 (373)
T 3c1x_A 243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--FDITVYL----LQGRR-- 314 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS--SCHHHHH----HTTCC--
T ss_pred cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH--HHHHHHH----HcCCC--
Confidence 43321 1233456789999999988899999999999999999999 6777764322 2222221 11110
Q ss_pred cccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCC
Q 037197 930 EALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPR 981 (1009)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~ 981 (1009)
...+ ..++ ..+.+++.+||+.||++||++.|+++.|+++...
T Consensus 315 -~~~p---~~~~------~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~ 356 (373)
T 3c1x_A 315 -LLQP---EYCP------DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 356 (373)
T ss_dssp -CCCC---TTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -CCCC---CCCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 1111 1111 2466788999999999999999999999988643
No 219
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-36 Score=333.95 Aligned_cols=259 Identities=25% Similarity=0.413 Sum_probs=203.0
Q ss_pred cCCcCceeccCCceEEEEEEECCCC---eEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeE-EE
Q 037197 699 CVKESNIIGMGGNGIVYKAEFHRPH---MVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNV-MM 774 (1009)
Q Consensus 699 ~~~~~~~iG~G~~g~Vyk~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~-~l 774 (1009)
.|+..+.||+|+||.||+|.+..++ ..||+|.+... ......+.+.+|++++++++||||+++++++.+.+.. ++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI-TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc-ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 4566789999999999999975443 47999998543 3344556777999999999999999999999876655 99
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceec
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMM 854 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~ 854 (1009)
||||+.+|+|.+++..... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 101 v~e~~~~~~L~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRSPQR---NPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDI 174 (298)
T ss_dssp EECCCTTCBHHHHHHCTTC---CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred EEecccCCCHHHHHhcccc---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence 9999999999999976432 378899999999999999999999 9999999999999999999999999999865
Q ss_pred ccCC----CceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccc
Q 037197 855 LHKN----ETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDE 930 (1009)
Q Consensus 855 ~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1009)
.... .......+++.|+|||...+..++.++||||||+++|+|++|..|+..... ..+....+ .....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~-~~~~~~~~----~~~~~--- 246 (298)
T 3pls_A 175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID-PFDLTHFL----AQGRR--- 246 (298)
T ss_dssp TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-GGGHHHHH----HTTCC---
T ss_pred cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC-HHHHHHHh----hcCCC---
Confidence 4322 222345678899999999998999999999999999999996665432211 12222221 11110
Q ss_pred ccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCC
Q 037197 931 ALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPR 981 (1009)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~ 981 (1009)
.......+ ..+.+++.+|++.||++|||+.|+++.|+++...
T Consensus 247 ---~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 247 ---LPQPEYCP------DSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp ---CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCccch------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 01111111 2466788999999999999999999999998654
No 220
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=350.41 Aligned_cols=264 Identities=18% Similarity=0.230 Sum_probs=205.5
Q ss_pred hcCCcCceeccCCceEEEEEEECC--------CCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceee--------
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHR--------PHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVR-------- 761 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~-------- 761 (1009)
++|+..+.||+|+||.||+|.+.. .++.||+|++... ..+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~ 114 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYST 114 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence 578999999999999999999987 4789999998543 35678999999999999988
Q ss_pred -------EEeEEEc-CCeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCC
Q 037197 762 -------LLGYLHN-ETNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSN 833 (1009)
Q Consensus 762 -------l~~~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~ 833 (1009)
+++++.. +...++||||+ +++|.+++.... ...+++.+++.++.||++||+|||++ +|+||||||+
T Consensus 115 ~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~ 188 (352)
T 2jii_A 115 PLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAE 188 (352)
T ss_dssp TTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGG
T ss_pred CccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHH
Confidence 6777765 77899999999 999999997652 23389999999999999999999999 9999999999
Q ss_pred cEEeCCCC--cEEEcccccceecccCCC-------ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCC
Q 037197 834 NILLDANL--EARIADFGLARMMLHKNE-------TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPL 904 (1009)
Q Consensus 834 NIll~~~~--~~kl~DfGls~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf 904 (1009)
||+++.++ .+||+|||+++.+..... ......||+.|+|||+..+..++.++||||||+++|||++|+.||
T Consensus 189 NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 268 (352)
T 2jii_A 189 NIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPW 268 (352)
T ss_dssp GEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred HEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 99999998 999999999987643321 113347899999999999889999999999999999999999999
Q ss_pred CCCCCCCccHHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 905 DPAFGGSKDIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
..................... ....+.... ..... ..+.+++.+|++.||++||++.|+++.|+++..+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~---~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 269 TNCLPNTEDIMKQKQKFVDKP---GPFVGPCGH--WIRPS---ETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp GGGTTCHHHHHHHHHHHHHSC---CCEECTTSC--EECCC---HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred ccCCcCHHHHHHHHHhccCCh---hhhhhhccc--cCCCc---HHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence 754322222222222211111 111111100 00111 24667889999999999999999999999987554
No 221
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=333.54 Aligned_cols=252 Identities=25% Similarity=0.383 Sum_probs=197.2
Q ss_pred CCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEEecc
Q 037197 700 VKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVYDYM 779 (1009)
Q Consensus 700 ~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~E~~ 779 (1009)
|....+||+|+||.||+|.+..+++.||||.+.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 455668999999999999999999999999986542 334566779999999999999999999999999999999999
Q ss_pred CCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCC-CCcEEEcccccceecccCC
Q 037197 780 PNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDA-NLEARIADFGLARMMLHKN 858 (1009)
Q Consensus 780 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~-~~~~kl~DfGls~~~~~~~ 858 (1009)
++++|.+++..... ....++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||++.......
T Consensus 102 ~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 102 PGGSLSALLRSKWG-PLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp SEEEHHHHHHHTTC-CCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred CCCCHHHHHHhhcc-CCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence 99999999976432 23367888889999999999999999 9999999999999987 8999999999998765444
Q ss_pred CceeeecccCcccCCcccCCC--CCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCccc
Q 037197 859 ETVSMVAGSYGYIAPEYGYTL--KVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSI 936 (1009)
Q Consensus 859 ~~~~~~~gt~~y~aPE~~~~~--~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1009)
.......|++.|+|||+.... .++.++||||||+++|||++|+.||...... ...+....... ..+.+
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~------~~~~~ 247 (295)
T 2clq_A 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP----QAAMFKVGMFK------VHPEI 247 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH----HHHHHHHHHHC------CCCCC
T ss_pred CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch----hHHHHhhcccc------ccccc
Confidence 334456789999999987654 3789999999999999999999999632111 11111111111 11222
Q ss_pred cccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 937 AGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 937 ~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
..... ..+.+++.+|++.||++||++.|+++
T Consensus 248 ~~~~~------~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 248 PESMS------AEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp CTTSC------HHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred cccCC------HHHHHHHHHHccCChhhCCCHHHHhc
Confidence 22221 24567889999999999999999985
No 222
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.3e-37 Score=345.61 Aligned_cols=262 Identities=26% Similarity=0.348 Sum_probs=204.3
Q ss_pred CCcCceeccCCceEEEEEEE----CCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEc--CCeEE
Q 037197 700 VKESNIIGMGGNGIVYKAEF----HRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHN--ETNVM 773 (1009)
Q Consensus 700 ~~~~~~iG~G~~g~Vyk~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~--~~~~~ 773 (1009)
|+..+.||+|+||.||++.. ..+++.||||++... ......+.+.+|++++++++||||+++++++.+ ....+
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc-cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 48889999999999988764 346899999999654 334455677799999999999999999999987 46789
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
+||||+++|+|.+++.... +++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 112 lv~e~~~~~~L~~~l~~~~-----~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPRHS-----IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp EEECCCTTCBHHHHGGGSC-----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEecccCCcHHHHHhhCC-----CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccc
Confidence 9999999999999996543 78899999999999999999999 999999999999999999999999999987
Q ss_pred cccCCC---ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCC---------CccHHHHHHHH
Q 037197 854 MLHKNE---TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGG---------SKDIVEWVLSM 921 (1009)
Q Consensus 854 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~---------~~~~~~~~~~~ 921 (1009)
...... ......+++.|+|||++.+..++.++||||||+++|||++|+.||...... .......+...
T Consensus 184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (318)
T 3lxp_A 184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL 263 (318)
T ss_dssp CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHH
Confidence 754432 223345778899999998888999999999999999999999998632110 00000111111
Q ss_pred HhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 922 IKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
...+. .......+. ..+.+++.+|++.||++|||+.|+++.|+.+.++.
T Consensus 264 ~~~~~------~~~~~~~~~------~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 264 LERGE------RLPRPDKCP------AEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp HHTTC------CCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred Hhccc------CCCCCcccc------HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 11111 111111111 24667889999999999999999999999886543
No 223
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.1e-36 Score=335.06 Aligned_cols=259 Identities=26% Similarity=0.412 Sum_probs=200.8
Q ss_pred hcCCcCceeccCCceEEEEEEECCC---CeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEE-cCCeEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRP---HMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLH-NETNVM 773 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~-~~~~~~ 773 (1009)
..|+..+.||+|+||.||+|.+..+ ...||+|.+... ......+.+.+|++++++++||||+++++++. .++..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC-CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 4578889999999999999997543 346899998643 33445567789999999999999999999864 556789
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
+||||+++|+|.++++.... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARD 177 (298)
T ss_dssp EEEECCTTCBHHHHHHCTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred EEEeCCCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccc
Confidence 99999999999999975432 378889999999999999999999 999999999999999999999999999986
Q ss_pred cccCC----CceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhcccc
Q 037197 854 MLHKN----ETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQ 928 (1009)
Q Consensus 854 ~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 928 (1009)
..... .......+|+.|+|||...+..++.++||||+|+++|||++ |.+||...... +....+ . .+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~--~~~~~~---~-~~~-- 249 (298)
T 3f66_A 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYL---L-QGR-- 249 (298)
T ss_dssp CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT--THHHHH---H-TTC--
T ss_pred ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH--HHHHHH---h-cCC--
Confidence 64332 12334567789999999988889999999999999999999 55566532211 222111 1 111
Q ss_pred ccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCC
Q 037197 929 DEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPR 981 (1009)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~ 981 (1009)
. ... ....+ ..+.+++.+|++.||++||++.|+++.|+++...
T Consensus 250 ~-~~~---~~~~~------~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 250 R-LLQ---PEYCP------DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp C-CCC---CTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred C-CCC---CccCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 0 011 11111 2466788999999999999999999999988653
No 224
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4.2e-37 Score=339.23 Aligned_cols=254 Identities=23% Similarity=0.339 Sum_probs=198.4
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEE
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV 775 (1009)
..+.|+..+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC--CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 356789999999999999999999999999999998543 233456778999999999999999999999999999999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
|||+++++|.+++..... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 95 ~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLELDR---GLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL 168 (302)
T ss_dssp EECCTTEEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHH
T ss_pred EEeCCCCcHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccc
Confidence 999999999999865322 278899999999999999999999 99999999999999999999999999986543
Q ss_pred cCCCceeeecccCcccCCccc-----CCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccc
Q 037197 856 HKNETVSMVAGSYGYIAPEYG-----YTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDE 930 (1009)
Q Consensus 856 ~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1009)
..........|++.|+|||+. ....++.++||||||+++|+|++|+.||... +............. ..
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-----~~~~~~~~~~~~~~--~~ 241 (302)
T 2j7t_A 169 KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL-----NPMRVLLKIAKSDP--PT 241 (302)
T ss_dssp HHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHHHHHHHSCC--CC
T ss_pred ccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccC-----CHHHHHHHHhccCC--cc
Confidence 322233445789999999987 4667889999999999999999999999732 22222222222111 00
Q ss_pred ccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 931 ALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
... ...+ ...+.+++.+|++.||++|||+.|+++
T Consensus 242 ~~~---~~~~------~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 242 LLT---PSKW------SVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp CSS---GGGS------CHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred cCC---cccc------CHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 000 1111 124667889999999999999999875
No 225
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=5.3e-37 Score=346.79 Aligned_cols=258 Identities=25% Similarity=0.347 Sum_probs=185.7
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcC------
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNE------ 769 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~------ 769 (1009)
+.++|+..+.||+|+||.||+|.+..+++.||||++..........+.+.+|+++++.++||||+++++++...
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 34678999999999999999999999999999999976555556667788999999999999999999998654
Q ss_pred CeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccc
Q 037197 770 TNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFG 849 (1009)
Q Consensus 770 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfG 849 (1009)
...++||||+ +++|.++++.. .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKCQ-----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CCCEEEEECC-CEECC-----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC--
T ss_pred CeEEEEeccc-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecc
Confidence 5679999999 78999988653 278899999999999999999999 99999999999999999999999999
Q ss_pred cceecccCCCceeeecccCcccCCcccCC-CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhh-ccc
Q 037197 850 LARMMLHKNETVSMVAGSYGYIAPEYGYT-LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKS-NKA 927 (1009)
Q Consensus 850 ls~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~-~~~ 927 (1009)
+++.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||... +....+...... +..
T Consensus 178 ~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-----~~~~~l~~i~~~~g~p 249 (367)
T 2fst_X 178 LARHTAD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT-----DHIDQLKLILRLVGTP 249 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHHHHHHHCSC
T ss_pred ccccccc---cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHHHhCCC
Confidence 9976532 2344678999999998776 67899999999999999999999999732 112222221111 110
Q ss_pred cccccC-------------------ccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 928 QDEALD-------------------PSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 928 ~~~~~~-------------------~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
..+... ..+...+.. ....+.+++.+|++.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 250 GAELLKKISSESARNYIQSLTQMPKMNFANVFIG---ANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp CHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTT---CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCC---CCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 000000 000000000 1134678899999999999999999986
No 226
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=8.6e-37 Score=331.98 Aligned_cols=249 Identities=29% Similarity=0.395 Sum_probs=193.5
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC-ChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN-DIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
++|+..+.||+|+||.||+|.+..+++.||||++..... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 568889999999999999999998899999999854321 1123456779999999999999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
||+++++|.+++.... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 91 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 91 EYVSGGELFDYICKHG----RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp ECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred eccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 9999999999996543 278889999999999999999999 999999999999999999999999999976543
Q ss_pred CCCceeeecccCcccCCcccCCCCC-CcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCcc
Q 037197 857 KNETVSMVAGSYGYIAPEYGYTLKV-DEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPS 935 (1009)
Q Consensus 857 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1009)
. .......+++.|+|||...+..+ +.++||||||+++|+|++|+.||... ...... ..+..+.. .
T Consensus 164 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-----~~~~~~-~~~~~~~~-------~ 229 (276)
T 2h6d_A 164 G-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE-----HVPTLF-KKIRGGVF-------Y 229 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHH-HHHHHCCC-------C
T ss_pred C-cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC-----cHHHHH-HHhhcCcc-------c
Confidence 2 22334568999999999887665 68999999999999999999999732 222222 22222210 0
Q ss_pred ccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 936 IAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 936 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
+..... ..+.+++.+|++.||++||++.|+++
T Consensus 230 ~~~~~~------~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 230 IPEYLN------RSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp CCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CchhcC------HHHHHHHHHHccCChhhCCCHHHHHh
Confidence 111111 24567889999999999999999987
No 227
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=6.9e-38 Score=356.51 Aligned_cols=246 Identities=13% Similarity=0.149 Sum_probs=189.9
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC-ChhhHHHHHHHH---HHHhccCCCceeeEE-------eE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN-DIESGDDLFREV---SLLGRLRHRNIVRLL-------GY 765 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~---~~l~~l~Hpniv~l~-------~~ 765 (1009)
.+.|+..+.||+|+||.||+|.+..+++.||||++..... .....+.+.+|+ +.+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 4568889999999999999999988899999999975432 333456677999 555666899999998 66
Q ss_pred EEcCCe-----------------EEEEEeccCCCChhhhhcCCcc---ccccccHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 037197 766 LHNETN-----------------VMMVYDYMPNDSLGEALHGKEA---GKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPV 825 (1009)
Q Consensus 766 ~~~~~~-----------------~~lV~E~~~~gsL~~~l~~~~~---~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i 825 (1009)
+.+.+. .++||||+ +|+|.+++..... ....+++..++.|+.||++||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 665532 79999999 6899999975321 112355788889999999999999999 99
Q ss_pred EEeccCCCcEEeCCCCcEEEcccccceecccCCCceeeecccCcccCCcccCCC-----------CCCcccchHhHHHHH
Q 037197 826 IHRDIKSNNILLDANLEARIADFGLARMMLHKNETVSMVAGSYGYIAPEYGYTL-----------KVDEKSDIYSFGVVL 894 (1009)
Q Consensus 826 vH~dlk~~NIll~~~~~~kl~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDv~SlGvvl 894 (1009)
+||||||+||+++.++.+||+|||+++.. ........| +.|+|||++... .++.++|||||||++
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~---~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il 303 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRD---GARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEET---TCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheec---CCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence 99999999999999999999999999863 223445567 999999998877 799999999999999
Q ss_pred HHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 895 LELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 895 ~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
|||++|+.||....... ....... ...... ..+.+++.+||+.||++||++.|+++
T Consensus 304 ~elltg~~Pf~~~~~~~---------------~~~~~~~-----~~~~~~---~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 304 YWIWCADLPITKDAALG---------------GSEWIFR-----SCKNIP---QPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHSSCCC------C---------------CSGGGGS-----SCCCCC---HHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHCCCCCccccccc---------------chhhhhh-----hccCCC---HHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99999999996322110 0001111 011111 24567889999999999999999985
No 228
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=345.48 Aligned_cols=254 Identities=13% Similarity=0.112 Sum_probs=201.1
Q ss_pred HhcCCcCceeccCCceEEEEEE-----ECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccC---CCceeeEEeEEEc
Q 037197 697 LACVKESNIIGMGGNGIVYKAE-----FHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLR---HRNIVRLLGYLHN 768 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---Hpniv~l~~~~~~ 768 (1009)
.+.|...+.||+|+||.||+|. ...+++.||||++... ...++.+|++++++++ |+||+++++++..
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 3568889999999999999994 5667899999998543 2345667777777776 9999999999999
Q ss_pred CCeEEEEEeccCCCChhhhhcCCcc-ccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCC--------
Q 037197 769 ETNVMMVYDYMPNDSLGEALHGKEA-GKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDA-------- 839 (1009)
Q Consensus 769 ~~~~~lV~E~~~~gsL~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~-------- 839 (1009)
.+..++||||+++|+|.++++.... ....+++..++.|+.||++||+|||+. +|+||||||+||+++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC---
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccc
Confidence 9999999999999999999974321 223489999999999999999999998 9999999999999998
Q ss_pred ---CCcEEEcccccceecccC--CCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccH
Q 037197 840 ---NLEARIADFGLARMMLHK--NETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDI 914 (1009)
Q Consensus 840 ---~~~~kl~DfGls~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~ 914 (1009)
++.+||+|||+++.+... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.....+.
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--- 292 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE--- 292 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE---
T ss_pred ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc---
Confidence 899999999999865422 234455679999999999999899999999999999999999999996322210
Q ss_pred HHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCC-CCHHHHHHHHhhcCCC
Q 037197 915 VEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGR-PTMRDVITMLGEAKPR 981 (1009)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~R-Ps~~evl~~L~~~~~~ 981 (1009)
......+.. .. ..+ .+.+++..|++.+|.+| |++.++.+.|++...+
T Consensus 293 ---------------~~~~~~~~~-~~-~~~---~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 293 ---------------CKPEGLFRR-LP-HLD---MWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp ---------------EEECSCCTT-CS-SHH---HHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ---------------eeechhccc-cC-cHH---HHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 001111111 11 122 34467789999999998 6888888888877654
No 229
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.1e-36 Score=330.83 Aligned_cols=256 Identities=24% Similarity=0.323 Sum_probs=205.1
Q ss_pred HHHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEE
Q 037197 694 SEILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 694 ~~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 773 (1009)
..+.++|+..+.||+|+||.||+|.+..+++.||+|++..........+.+.+|++++++++||||+++++++.+....+
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 45678899999999999999999999988999999998665444445677889999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCC---CcEEEccccc
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDAN---LEARIADFGL 850 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~---~~~kl~DfGl 850 (1009)
+||||+++++|.+++.... .+++.+++.++.|+++||+|||+. +|+||||||+||+++.+ +.+||+|||+
T Consensus 98 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~ 170 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGL 170 (287)
T ss_dssp EEECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTG
T ss_pred EEEEccCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCc
Confidence 9999999999999886533 278999999999999999999999 99999999999999764 4699999999
Q ss_pred ceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccc
Q 037197 851 ARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDE 930 (1009)
Q Consensus 851 s~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1009)
+....... ......+++.|+|||...+ .++.++||||||+++|+|++|+.||... ....... .+..+...
T Consensus 171 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~-----~~~~~~~-~~~~~~~~-- 240 (287)
T 2wei_A 171 STCFQQNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK-----NEYDILK-RVETGKYA-- 240 (287)
T ss_dssp GGTBCCCS-SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHH-HHHHCCCC--
T ss_pred ceeecCCC-ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCC-----CHHHHHH-HHHcCCCC--
Confidence 97653322 2234468899999998765 4899999999999999999999999742 1222222 22222110
Q ss_pred ccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 931 ALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
...+... .. ..++.+++.+|++.||++|||+.|+++
T Consensus 241 ~~~~~~~-~~------~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 241 FDLPQWR-TI------SDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CCSGGGT-TS------CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCchhhh-hc------CHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 0001111 11 124667889999999999999999987
No 230
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.4e-36 Score=366.54 Aligned_cols=250 Identities=25% Similarity=0.356 Sum_probs=198.3
Q ss_pred ceeccCCceEEEEEEE--CCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEEeccCC
Q 037197 704 NIIGMGGNGIVYKAEF--HRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVYDYMPN 781 (1009)
Q Consensus 704 ~~iG~G~~g~Vyk~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~E~~~~ 781 (1009)
+.||+|+||.||+|.+ +..++.||||+++....+....+++.+|++++++++||||+++++++.+ +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 4799999999999955 4557899999997654445556778899999999999999999999975 458899999999
Q ss_pred CChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecccCCC--
Q 037197 782 DSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLHKNE-- 859 (1009)
Q Consensus 782 gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~~~-- 859 (1009)
|+|.++++... .+++..++.|+.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 454 g~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQQNR----HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHhhCC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 99999996543 278999999999999999999999 999999999999999999999999999987644332
Q ss_pred -ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccccccCcccc
Q 037197 860 -TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSIA 937 (1009)
Q Consensus 860 -~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (1009)
......+|+.|+|||++....++.++|||||||++|||++ |+.||.... .. .+...+..+. .....
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~-----~~-~~~~~i~~~~------~~~~p 594 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-----GS-EVTAMLEKGE------RMGCP 594 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HH-HHHHHHHTTC------CCCCC
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-----HH-HHHHHHHcCC------CCCCC
Confidence 2223456788999999988899999999999999999998 999997421 11 2222222222 11111
Q ss_pred ccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcC
Q 037197 938 GQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAK 979 (1009)
Q Consensus 938 ~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 979 (1009)
..++ .++.+++.+||+.||++||++.++++.|+++.
T Consensus 595 ~~~~------~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 595 AGCP------REMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp TTCC------HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCCC------HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 1222 24667889999999999999999999998763
No 231
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=9.3e-37 Score=339.63 Aligned_cols=257 Identities=22% Similarity=0.321 Sum_probs=199.2
Q ss_pred HHHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC------ChhhHHHHHHHHHHHhccCCCceeeEEeEEE
Q 037197 694 SEILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN------DIESGDDLFREVSLLGRLRHRNIVRLLGYLH 767 (1009)
Q Consensus 694 ~~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~ 767 (1009)
..+.++|+..+.||+|+||.||+|.+..+++.||||++..... .......+.+|++++++++||||+++++++.
T Consensus 6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 85 (322)
T 2ycf_A 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 85 (322)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc
Confidence 4567889999999999999999999999999999999865421 1122334668999999999999999999997
Q ss_pred cCCeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCc---EE
Q 037197 768 NETNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLE---AR 844 (1009)
Q Consensus 768 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~---~k 844 (1009)
.+. .++||||+++++|.+++.... .+++..++.++.||++||+|||++ +|+||||||+||+++.++. +|
T Consensus 86 ~~~-~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~k 157 (322)
T 2ycf_A 86 AED-YYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIK 157 (322)
T ss_dssp SSS-EEEEEECCTTEETHHHHSTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEE
T ss_pred CCc-eEEEEecCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEE
Confidence 765 899999999999999987543 278899999999999999999999 9999999999999987664 99
Q ss_pred EcccccceecccCCCceeeecccCcccCCcccC---CCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHH
Q 037197 845 IADFGLARMMLHKNETVSMVAGSYGYIAPEYGY---TLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSM 921 (1009)
Q Consensus 845 l~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 921 (1009)
|+|||+++..... .......||+.|+|||++. ...++.++||||||+++|+|++|+.||...... ..+...+.
T Consensus 158 l~Dfg~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~-- 233 (322)
T 2ycf_A 158 ITDFGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ-VSLKDQIT-- 233 (322)
T ss_dssp ECCCTTCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS-SCHHHHHH--
T ss_pred EccCccceecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH-HHHHHHHH--
Confidence 9999999876332 2223456899999999863 567889999999999999999999999743322 22222221
Q ss_pred HhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 922 IKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.+.. ...+...... ...+.+++.+|++.||++||++.|+++
T Consensus 234 --~~~~---~~~~~~~~~~------~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 234 --SGKY---NFIPEVWAEV------SEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp --HTCC---CCCHHHHTTS------CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --hCcc---ccCchhhhhc------CHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 1110 0111111111 234667899999999999999999984
No 232
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.6e-36 Score=343.40 Aligned_cols=201 Identities=23% Similarity=0.436 Sum_probs=176.3
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
.++|+..+.||+|+||.||+|.+..+++.||+|++... ......+.+.+|++++++++||||+++++++.+++..++||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECC-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccc-cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 45688999999999999999999999999999998654 23445567779999999999999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
||+++++|.++++.... +++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||++.....
T Consensus 111 e~~~~~~L~~~l~~~~~----~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 111 EHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp CCCTTCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred ECCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 99999999999975432 788999999999999999999832 899999999999999999999999999976532
Q ss_pred CCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCC
Q 037197 857 KNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDP 906 (1009)
Q Consensus 857 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~ 906 (1009)
. ......||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 185 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 232 (360)
T 3eqc_A 185 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232 (360)
T ss_dssp H--C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred c--cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 2 23345789999999999998999999999999999999999999974
No 233
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=366.93 Aligned_cols=250 Identities=23% Similarity=0.380 Sum_probs=197.4
Q ss_pred eeccCCceEEEEEEEC--CCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEEeccCCC
Q 037197 705 IIGMGGNGIVYKAEFH--RPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVYDYMPND 782 (1009)
Q Consensus 705 ~iG~G~~g~Vyk~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~E~~~~g 782 (1009)
.||+|+||.||+|.+. .++..||||+++.. ......+.+.+|++++++++||||+++++++.+ +..++||||+++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCC-CSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCC-CChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence 6999999999999875 34678999999654 233456778899999999999999999999986 5689999999999
Q ss_pred ChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecccCCC---
Q 037197 783 SLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLHKNE--- 859 (1009)
Q Consensus 783 sL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~~~--- 859 (1009)
+|.+++.... ..+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 421 ~L~~~l~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 494 (613)
T 2ozo_A 421 PLHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494 (613)
T ss_dssp BHHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred cHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence 9999996543 2378999999999999999999999 999999999999999999999999999987643322
Q ss_pred ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccccccCccccc
Q 037197 860 TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSIAG 938 (1009)
Q Consensus 860 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (1009)
......+++.|+|||++....++.++|||||||++|||++ |+.||..... .++ ...+..+.. .....
T Consensus 495 ~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--~~~----~~~i~~~~~------~~~p~ 562 (613)
T 2ozo_A 495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEV----MAFIEQGKR------MECPP 562 (613)
T ss_dssp -------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS--HHH----HHHHHTTCC------CCCCT
T ss_pred eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHH----HHHHHcCCC------CCCCC
Confidence 1122345689999999988899999999999999999998 9999974322 122 222222221 11111
Q ss_pred cCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCC
Q 037197 939 QCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKP 980 (1009)
Q Consensus 939 ~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 980 (1009)
.++ .++.+++.+||+.||++||++.++++.|+.+..
T Consensus 563 ~~~------~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 598 (613)
T 2ozo_A 563 ECP------PELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 598 (613)
T ss_dssp TCC------HHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred cCC------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 121 246678899999999999999999999998753
No 234
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=8.6e-37 Score=370.93 Aligned_cols=251 Identities=24% Similarity=0.293 Sum_probs=205.2
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC-ChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCCeEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN-DIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNETNVMM 774 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~l 774 (1009)
.+.|+..+.||+|+||.||+|++..+++.||||++.+... .....+.+..|.+++..+ +||+|+++++++++.+..|+
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 3568889999999999999999999999999999864311 122345667899999988 79999999999999999999
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceec
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMM 854 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~ 854 (1009)
||||+++|+|.++++.... +++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 420 V~E~~~gg~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQVGR----FKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEECCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEeCcCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 9999999999999975432 78899999999999999999999 9999999999999999999999999999875
Q ss_pred ccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCc
Q 037197 855 LHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDP 934 (1009)
Q Consensus 855 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1009)
...........||+.|+|||++....++.++|||||||++|||++|+.||... +..+..........
T Consensus 493 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~-----~~~~~~~~i~~~~~-------- 559 (674)
T 3pfq_A 493 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE-----DEDELFQSIMEHNV-------- 559 (674)
T ss_dssp CCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHSSCC--------
T ss_pred ccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC-----CHHHHHHHHHhCCC--------
Confidence 44455556678999999999999999999999999999999999999999732 22222222222111
Q ss_pred cccccCchHHHHHHHHHHHHHHhccCCCCCCCCH-----HHHHH
Q 037197 935 SIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTM-----RDVIT 973 (1009)
Q Consensus 935 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~-----~evl~ 973 (1009)
.+..... .++..++.+|++.||++||++ .|+++
T Consensus 560 ~~p~~~s------~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 560 AYPKSMS------KEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp CCCTTSC------HHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred CCCccCC------HHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 1111111 245678899999999999997 66653
No 235
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=4.6e-36 Score=330.19 Aligned_cols=255 Identities=23% Similarity=0.314 Sum_probs=203.1
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCC-------hhhHHHHHHHHHHHhccC-CCceeeEEeEEE
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDND-------IESGDDLFREVSLLGRLR-HRNIVRLLGYLH 767 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~-------~~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~ 767 (1009)
..++|+..+.||+|+||.||+|.+..+++.||||++...... ....+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 456789999999999999999999999999999999654321 122345668999999995 999999999999
Q ss_pred cCCeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcc
Q 037197 768 NETNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIAD 847 (1009)
Q Consensus 768 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 847 (1009)
+....++||||+++++|.+++.... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~d 167 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKV----TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTD 167 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred cCCeEEEEEeccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEec
Confidence 9999999999999999999997532 378899999999999999999999 999999999999999999999999
Q ss_pred cccceecccCCCceeeecccCcccCCcccC------CCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHH
Q 037197 848 FGLARMMLHKNETVSMVAGSYGYIAPEYGY------TLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSM 921 (1009)
Q Consensus 848 fGls~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 921 (1009)
||.+...... .......+++.|+|||+.. ...++.++||||||+++|||++|+.||... .........
T Consensus 168 fg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-----~~~~~~~~~ 241 (298)
T 1phk_A 168 FGFSCQLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR-----KQMLMLRMI 241 (298)
T ss_dssp CTTCEECCTT-CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHH
T ss_pred ccchhhcCCC-cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc-----cHHHHHHHH
Confidence 9999876433 2334457899999999864 456889999999999999999999999632 112222222
Q ss_pred HhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 922 IKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
..... ....+... .. ...+.+++.+|++.||++||++.|+++
T Consensus 242 ~~~~~---~~~~~~~~----~~---~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 242 MSGNY---QFGSPEWD----DY---SDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHTCC---CCCTTTGG----GS---CHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred hcCCc---ccCccccc----cc---CHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 21111 01111111 11 124667889999999999999999875
No 236
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=5.5e-37 Score=342.25 Aligned_cols=265 Identities=25% Similarity=0.346 Sum_probs=204.4
Q ss_pred HhcCCcCceeccCCceEEEEEE-----ECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCe
Q 037197 697 LACVKESNIIGMGGNGIVYKAE-----FHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETN 771 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~ 771 (1009)
.++|+..+.||+|+||.||+|. ...+++.||||++... .......++.+|+.++++++||||+++++++.+...
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc-cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 4578899999999999999998 4456789999999643 233445667799999999999999999999999999
Q ss_pred EEEEEeccCCCChhhhhcCCccc---cccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCC---CCcEEE
Q 037197 772 VMMVYDYMPNDSLGEALHGKEAG---KLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDA---NLEARI 845 (1009)
Q Consensus 772 ~~lV~E~~~~gsL~~~l~~~~~~---~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl 845 (1009)
.++||||+++++|.+++...... ...+++.+++.++.|+++||+|||+. +|+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEE
Confidence 99999999999999999765321 23478899999999999999999999 9999999999999984 446999
Q ss_pred cccccceecccCCC--ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHH
Q 037197 846 ADFGLARMMLHKNE--TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMI 922 (1009)
Q Consensus 846 ~DfGls~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~ 922 (1009)
+|||++........ ......+++.|+|||...+..++.++||||||+++|||++ |+.||... ...... ..+
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~-----~~~~~~-~~~ 258 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----SNQEVL-EFV 258 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-----CHHHHH-HHH
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc-----CHHHHH-HHH
Confidence 99999976533321 2234567889999999888889999999999999999998 99999632 112222 222
Q ss_pred hhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCcc
Q 037197 923 KSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRRK 983 (1009)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~~ 983 (1009)
..+.. +.....+. ..+.+++.+||+.||++||++.|+++.|+.+.....
T Consensus 259 ~~~~~------~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~ 307 (327)
T 2yfx_A 259 TSGGR------MDPPKNCP------GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 307 (327)
T ss_dssp HTTCC------CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred hcCCC------CCCCCCCC------HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence 22211 11111111 245678899999999999999999999998865443
No 237
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=338.94 Aligned_cols=263 Identities=28% Similarity=0.394 Sum_probs=205.0
Q ss_pred hcCCcCceeccCCceEEEEEEE----CCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCC--e
Q 037197 698 ACVKESNIIGMGGNGIVYKAEF----HRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNET--N 771 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~--~ 771 (1009)
+.|+..+.||+|+||.||+|.. ..+++.||||++... .....+.+.+|++++++++||||+++++++...+ .
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 118 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 118 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence 4588899999999999999984 567899999998653 3344567779999999999999999999986644 6
Q ss_pred EEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccc
Q 037197 772 VMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLA 851 (1009)
Q Consensus 772 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls 851 (1009)
.++||||+++++|.+++..... .+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 119 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~ 192 (326)
T 2w1i_A 119 LKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLT 192 (326)
T ss_dssp CEEEECCCTTCBHHHHHHHSTT---SSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred eEEEEECCCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcch
Confidence 8999999999999999976432 378899999999999999999998 9999999999999999999999999999
Q ss_pred eecccCCCc---eeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCC----------CCCccHHHHH
Q 037197 852 RMMLHKNET---VSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAF----------GGSKDIVEWV 918 (1009)
Q Consensus 852 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~----------~~~~~~~~~~ 918 (1009)
......... .....++..|+|||...+..++.++||||||+++|||++|..||.... .........+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (326)
T 2w1i_A 193 KVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 272 (326)
T ss_dssp EECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred hhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHH
Confidence 876544322 122346778999999888889999999999999999999999886310 0000111111
Q ss_pred HHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCC
Q 037197 919 LSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKP 980 (1009)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 980 (1009)
...+..+. .......++ .++.+++.+||+.||++||++.|+++.|+++..
T Consensus 273 ~~~~~~~~------~~~~~~~~~------~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 273 IELLKNNG------RLPRPDGCP------DEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HHHHHTTC------CCCCCTTCC------HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhhcCC------CCCCCCccc------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 12221111 011111111 246678899999999999999999999998754
No 238
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2e-36 Score=345.17 Aligned_cols=262 Identities=20% Similarity=0.268 Sum_probs=194.0
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEc-------
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHN------- 768 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~------- 768 (1009)
..++|+..+.||+|+||.||+|.+..+++.||||++...... ..+|+++++.++||||+++++++..
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY------KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS------CCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch------HHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 346789999999999999999999999999999998543221 2279999999999999999999843
Q ss_pred -------------------------------CCeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHH
Q 037197 769 -------------------------------ETNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYL 817 (1009)
Q Consensus 769 -------------------------------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~L 817 (1009)
..+.++||||++ |+|.+.+.........+++..+..++.||++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345899999997 588877764333334488999999999999999999
Q ss_pred HhcCCCCeEEeccCCCcEEeC-CCCcEEEcccccceecccCCCceeeecccCcccCCcccCCC-CCCcccchHhHHHHHH
Q 037197 818 HHDCQPPVIHRDIKSNNILLD-ANLEARIADFGLARMMLHKNETVSMVAGSYGYIAPEYGYTL-KVDEKSDIYSFGVVLL 895 (1009)
Q Consensus 818 H~~~~~~ivH~dlk~~NIll~-~~~~~kl~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlGvvl~ 895 (1009)
|+. +|+||||||+||+++ .++.+||+|||+++..... .......+|+.|+|||.+.+. .++.++||||+||++|
T Consensus 158 H~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ 233 (383)
T 3eb0_A 158 HSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS-EPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFG 233 (383)
T ss_dssp HTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTT-SCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred HHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCC-CCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHH
Confidence 998 999999999999997 6889999999999876433 333445689999999987764 4899999999999999
Q ss_pred HHHhCCCCCCCCCCCCccHHHHHHHHHhh-ccc-----------cccccCccccccC-ch--HHHHHHHHHHHHHHhccC
Q 037197 896 ELLTGKMPLDPAFGGSKDIVEWVLSMIKS-NKA-----------QDEALDPSIAGQC-KH--VQEEMLLVLRIAVLCTAK 960 (1009)
Q Consensus 896 elltg~~Pf~~~~~~~~~~~~~~~~~~~~-~~~-----------~~~~~~~~~~~~~-~~--~~~~~~~l~~l~~~cl~~ 960 (1009)
||++|+.||.... ..+.+...+.. +.. ..+..-+.+.... .. .......+.+++.+|++.
T Consensus 234 ell~g~~pf~~~~-----~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 308 (383)
T 3eb0_A 234 ELILGKPLFSGET-----SIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRY 308 (383)
T ss_dssp HHHHSSCSSCCSS-----HHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCS
T ss_pred HHHhCCCCCCCCC-----hHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccC
Confidence 9999999997321 11111111111 000 0010011110000 00 000112467889999999
Q ss_pred CCCCCCCHHHHHH
Q 037197 961 LPKGRPTMRDVIT 973 (1009)
Q Consensus 961 dp~~RPs~~evl~ 973 (1009)
||++|||+.|+++
T Consensus 309 dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 309 EPDLRINPYEAMA 321 (383)
T ss_dssp SGGGSCCHHHHHT
T ss_pred ChhhCCCHHHHhc
Confidence 9999999999984
No 239
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.2e-36 Score=341.67 Aligned_cols=261 Identities=23% Similarity=0.332 Sum_probs=201.0
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHH-HhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSL-LGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~-l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
++|+..+.||+|+||.||+|.+..+++.||||++...... ....++..|+.+ ++.++||||+++++++.+++..++||
T Consensus 51 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCC-HHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCc-HHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 4678888999999999999999989999999999665433 334455555555 78889999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
||+++ +|.+++.........+++..++.++.||++||+|||++. +|+||||||+||+++.++.+||+|||+++....
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 206 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 206 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHSC
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceeccc
Confidence 99975 899988643223344899999999999999999999742 899999999999999999999999999976532
Q ss_pred CCCceeeecccCcccCCcccC----CCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccccc
Q 037197 857 KNETVSMVAGSYGYIAPEYGY----TLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEAL 932 (1009)
Q Consensus 857 ~~~~~~~~~gt~~y~aPE~~~----~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1009)
. .......||+.|+|||++. ...++.++|||||||++|||++|+.||.... .....+......... . .
T Consensus 207 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~----~~~~~~~~~~~~~~~--~-~ 278 (340)
T 3an0_A 207 S-VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG----TPFQQLKQVVEEPSP--Q-L 278 (340)
T ss_dssp H-HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCS----CHHHHHHHHHHSCCC--C-C
T ss_pred c-cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcccc----chHHHHHHHhcCCCC--C-C
Confidence 2 2223346899999999854 4478899999999999999999999997432 122222222222110 0 0
Q ss_pred CccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH--HHhhcC
Q 037197 933 DPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT--MLGEAK 979 (1009)
Q Consensus 933 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~--~L~~~~ 979 (1009)
....+ ..++.+++.+|++.||++||++.|+++ .+....
T Consensus 279 ---~~~~~------~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 318 (340)
T 3an0_A 279 ---PADKF------SAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE 318 (340)
T ss_dssp ---CGGGS------CHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHT
T ss_pred ---CcccC------CHHHHHHHHHHccCCcccCcCHHHHhcCcCccccc
Confidence 00111 124667889999999999999999987 444433
No 240
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.9e-36 Score=342.17 Aligned_cols=257 Identities=23% Similarity=0.315 Sum_probs=198.5
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeE---
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNV--- 772 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~--- 772 (1009)
+.++|...+.||+|+||.||+|.+..+++.||||++............+.+|+.++++++||||+++++++...+..
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 34678889999999999999999999999999999976655555567778999999999999999999999877654
Q ss_pred ---EEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccc
Q 037197 773 ---MMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFG 849 (1009)
Q Consensus 773 ---~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfG 849 (1009)
++||||++ ++|.+++... +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~~------~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGME------FSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTSC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred eeEEEEEcccc-ccHHHHhhcC------CCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecC
Confidence 99999997 6888887432 78899999999999999999999 99999999999999999999999999
Q ss_pred cceecccCCCceeeecccCcccCCcccCC-CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccc
Q 037197 850 LARMMLHKNETVSMVAGSYGYIAPEYGYT-LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQ 928 (1009)
Q Consensus 850 ls~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 928 (1009)
+++.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||... +..+.+..........
T Consensus 190 ~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~-----~~~~~~~~i~~~~~~~ 261 (371)
T 4exu_A 190 LARHADA---EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK-----DYLDQLTQILKVTGVP 261 (371)
T ss_dssp CC-----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHHHHHHHCCC
T ss_pred ccccccc---CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHHHHhCCC
Confidence 9976532 2344578999999998876 67899999999999999999999999732 2222222222111100
Q ss_pred -cccc-------------------CccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 929 -DEAL-------------------DPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 929 -~~~~-------------------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.+.. ...+..... .....+.+++.+|++.||++|||+.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 262 GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFP---RASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp CHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHST---TSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred cHHHHHHhhhhhhhhhhhccCCCcchhHHHhcc---ccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 0000 000000000 11235678999999999999999999986
No 241
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=7.4e-36 Score=347.46 Aligned_cols=263 Identities=17% Similarity=0.215 Sum_probs=206.4
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCC-CceeeEEeEEEcCCeEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRH-RNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H-pniv~l~~~~~~~~~~~lV 775 (1009)
.++|+..+.||+|+||.||+|.+..+++.||||++..... ..++.+|+++++.++| +++..+..++.+.+..++|
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lv 81 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLV 81 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEE
Confidence 4678999999999999999999999899999998754432 2346789999999976 5666777777888899999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEe---CCCCcEEEcccccce
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILL---DANLEARIADFGLAR 852 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~DfGls~ 852 (1009)
|||+ +++|.+++..... .+++..++.|+.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++
T Consensus 82 me~~-g~sL~~ll~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (483)
T 3sv0_A 82 MDLL-GPSLEDLFNFCSR---KLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (483)
T ss_dssp EECC-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EECC-CCCHHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence 9999 9999999974322 289999999999999999999999 99999999999999 578999999999998
Q ss_pred ecccCCCc-------eeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhc
Q 037197 853 MMLHKNET-------VSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSN 925 (1009)
Q Consensus 853 ~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 925 (1009)
.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~--~~~~~~~~i~~~~ 232 (483)
T 3sv0_A 155 KYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG--TKKQKYEKISEKK 232 (483)
T ss_dssp ECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS--SHHHHHHHHHHHH
T ss_pred eccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccch--hHHHHHHHHhhcc
Confidence 76544321 22567999999999999999999999999999999999999999754332 1111111111110
Q ss_pred cccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCC
Q 037197 926 KAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPR 981 (1009)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~ 981 (1009)
. .... ..+...+ ..++.+++.+|++.+|++||++.++++.|+++..+
T Consensus 233 ~--~~~~-~~l~~~~------p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 233 V--ATSI-EALCRGY------PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp H--HSCH-HHHHTTS------CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred c--cccH-HHHhcCC------cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 0 0000 0011111 12467889999999999999999999999988543
No 242
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.9e-37 Score=344.06 Aligned_cols=256 Identities=25% Similarity=0.300 Sum_probs=199.8
Q ss_pred hcCCcCceeccCCceEEEEEEEC---CCCeEEEEEEcccCCC--ChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCCe
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFH---RPHMVVAVKKLWRSDN--DIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNETN 771 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~---~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~ 771 (1009)
++|+..+.||+|+||.||+|++. .+++.||||+++.... .....+.+.+|+++++++ +||||+++++++.....
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 56888999999999999999984 4689999999864321 112234455899999999 69999999999999999
Q ss_pred EEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccc
Q 037197 772 VMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLA 851 (1009)
Q Consensus 772 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls 851 (1009)
.++||||+++|+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRE----RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred EEEEeecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 999999999999999997543 278899999999999999999999 9999999999999999999999999999
Q ss_pred eecccCC-CceeeecccCcccCCcccCC--CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccc
Q 037197 852 RMMLHKN-ETVSMVAGSYGYIAPEYGYT--LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQ 928 (1009)
Q Consensus 852 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 928 (1009)
+.+.... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..............
T Consensus 207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~--- 282 (355)
T 1vzo_A 207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK-NSQAEISRRILKSE--- 282 (355)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC-CCHHHHHHHHHHCC---
T ss_pred eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc-chHHHHHHHHhccC---
Confidence 8764332 23334679999999999875 34789999999999999999999999743221 22222222222111
Q ss_pred ccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHH
Q 037197 929 DEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRP-----TMRDVITML 975 (1009)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RP-----s~~evl~~L 975 (1009)
+.+..... ..+.+++.+|++.||++|| ++.|+++-.
T Consensus 283 -----~~~~~~~~------~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 283 -----PPYPQEMS------ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp -----CCCCTTSC------HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred -----CCCCcccC------HHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 11111111 2356788999999999999 888887643
No 243
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=5.9e-36 Score=334.51 Aligned_cols=260 Identities=20% Similarity=0.247 Sum_probs=198.5
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccC-CCceeeEEeEEEc--CCeEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLR-HRNIVRLLGYLHN--ETNVM 773 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~--~~~~~ 773 (1009)
.++|+..+.||+|+||.||+|.+..+++.||||++... ..+.+.+|++++++++ ||||+++++++.+ ....+
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 109 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 109 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence 36789999999999999999999999999999998532 2456779999999997 9999999999987 66789
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCC-cEEEcccccce
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANL-EARIADFGLAR 852 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~-~~kl~DfGls~ 852 (1009)
+||||+++++|.++++. +++.++..++.|+++||+|||+. +|+||||||+||+++.++ .+||+|||+++
T Consensus 110 lv~e~~~~~~l~~~~~~-------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~ 179 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQT-------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179 (330)
T ss_dssp EEEECCCCCCHHHHGGG-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEeccCchhHHHHHHh-------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence 99999999999999843 67888899999999999999999 999999999999999776 89999999998
Q ss_pred ecccCCCceeeecccCcccCCcccCC-CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcc-----
Q 037197 853 MMLHKNETVSMVAGSYGYIAPEYGYT-LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNK----- 926 (1009)
Q Consensus 853 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~----- 926 (1009)
..... .......+++.|+|||+..+ ..++.++|||||||++|||++|+.||.........+...... .....
T Consensus 180 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~-~~~~~~~~~~ 257 (330)
T 3nsz_A 180 FYHPG-QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV-LGTEDLYDYI 257 (330)
T ss_dssp ECCTT-CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHH-HCHHHHHHHH
T ss_pred EcCCC-CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHh-cCCchhhhHH
Confidence 76433 23344578999999999876 668999999999999999999999996432221111111110 00000
Q ss_pred -ccccccCccc------------cc--cCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 927 -AQDEALDPSI------------AG--QCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 927 -~~~~~~~~~~------------~~--~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
......++.+ .. ..........++.+++.+|++.||++|||++|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 258 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000000000 00 00000001235678899999999999999999985
No 244
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=8.3e-37 Score=334.87 Aligned_cols=263 Identities=29% Similarity=0.394 Sum_probs=196.0
Q ss_pred HhcCCcCceeccCCceEEEEEEECC-C--CeEEEEEEcccCCC-ChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHR-P--HMVVAVKKLWRSDN-DIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNV 772 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~-~--~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~ 772 (1009)
.++|+..+.||+|+||.||+|.+.. + +..||||++..... .....+.+.+|++++++++||||+++++++.++. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 3568889999999999999998643 2 34699999865432 2344567779999999999999999999998765 8
Q ss_pred EEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccce
Q 037197 773 MMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLAR 852 (1009)
Q Consensus 773 ~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~ 852 (1009)
++||||+++++|.+++.... ..+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ---GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG---GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eeeEecccCCCHHHHHHhcc---CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccc
Confidence 89999999999999997542 2378899999999999999999999 99999999999999999999999999998
Q ss_pred ecccCCCc---eeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhcccc
Q 037197 853 MMLHKNET---VSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQ 928 (1009)
Q Consensus 853 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 928 (1009)
........ .....+++.|+|||+.....++.++||||||+++|||++ |+.||... ...+.+........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-----~~~~~~~~~~~~~~-- 242 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-----NGSQILHKIDKEGE-- 242 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHHHHTSCC--
T ss_pred cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccC-----CHHHHHHHHHccCC--
Confidence 76443321 223456788999999888888999999999999999999 99999732 22222222222111
Q ss_pred ccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCcc
Q 037197 929 DEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRRK 983 (1009)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~~ 983 (1009)
........+ ..+.+++.+|++.||++||++.++++.|+++.+...
T Consensus 243 ----~~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 287 (291)
T 1u46_A 243 ----RLPRPEDCP------QDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDM 287 (291)
T ss_dssp ----CCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred ----CCCCCcCcC------HHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccch
Confidence 111111111 246678899999999999999999999999886543
No 245
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.4e-36 Score=334.90 Aligned_cols=254 Identities=22% Similarity=0.347 Sum_probs=194.8
Q ss_pred HHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEc-----
Q 037197 695 EILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRL-RHRNIVRLLGYLHN----- 768 (1009)
Q Consensus 695 ~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~----- 768 (1009)
...++|+..+.||+|+||.||+|.+..+++.||||++.... .....+.+|+++++++ +||||+++++++..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 97 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence 34577999999999999999999999889999999986542 2345677999999999 89999999999876
Q ss_pred -CCeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcc
Q 037197 769 -ETNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIAD 847 (1009)
Q Consensus 769 -~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 847 (1009)
....++||||+++++|.+++..... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~D 172 (326)
T 2x7f_A 98 MDDQLWLVMEFCGAGSVTDLIKNTKG--NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 172 (326)
T ss_dssp CCCEEEEEEECCTTEEHHHHHHHSGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECC
T ss_pred ccceEEEEEEcCCCCcHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEee
Confidence 4678999999999999999976432 2378888999999999999999999 999999999999999999999999
Q ss_pred cccceecccCCCceeeecccCcccCCcccC-----CCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHH
Q 037197 848 FGLARMMLHKNETVSMVAGSYGYIAPEYGY-----TLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMI 922 (1009)
Q Consensus 848 fGls~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 922 (1009)
||++..............|++.|+|||++. ...++.++||||||+++|+|++|+.||.... .........
T Consensus 173 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~ 247 (326)
T 2x7f_A 173 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH-----PMRALFLIP 247 (326)
T ss_dssp CTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHH
T ss_pred CcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc-----HHHHHHHhh
Confidence 999987644333344567899999999876 5678899999999999999999999996321 111111111
Q ss_pred hhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 923 KSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.... ...... ..+ ..+.+++.+|++.||++||++.|+++
T Consensus 248 ~~~~--~~~~~~----~~~------~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 248 RNPA--PRLKSK----KWS------KKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HSCC--CCCSCS----CSC------HHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cCcc--ccCCcc----ccC------HHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1111 111111 111 24567889999999999999999987
No 246
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=7.3e-37 Score=363.08 Aligned_cols=257 Identities=26% Similarity=0.412 Sum_probs=205.1
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEEe
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVYD 777 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~E 777 (1009)
+.|+..+.||+|+||.||+|.+.. +..||||+++... ...+.+.+|++++++++||||+++++++.+ +..++|||
T Consensus 267 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 267 ESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 457788899999999999999987 5679999996542 234677899999999999999999999876 67899999
Q ss_pred ccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecccC
Q 037197 778 YMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLHK 857 (1009)
Q Consensus 778 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~ 857 (1009)
|+++|+|.++++.... ..+++.+++.|+.||++||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 342 ~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 416 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 416 (535)
T ss_dssp CCTTEEHHHHHSHHHH--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH
T ss_pred hhcCCcHHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCC
Confidence 9999999999964321 2378889999999999999999999 9999999999999999999999999999865332
Q ss_pred CC-ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccccccCcc
Q 037197 858 NE-TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPS 935 (1009)
Q Consensus 858 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1009)
.. ......++..|+|||++....++.++|||||||++|||++ |+.||... ...+. ...+..+.. ..
T Consensus 417 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~-----~~~~~-~~~i~~~~~------~~ 484 (535)
T 2h8h_A 417 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-----VNREV-LDQVERGYR------MP 484 (535)
T ss_dssp HHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC-----CHHHH-HHHHHTTCC------CC
T ss_pred ceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----CHHHH-HHHHHcCCC------CC
Confidence 11 1223346778999999888889999999999999999999 99999732 11222 222222211 11
Q ss_pred ccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 936 IAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 936 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
....+. ..+.+++.+||+.||++||++.++++.|+++....
T Consensus 485 ~~~~~~------~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 485 CPPECP------ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp CCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred CCCCCC------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 111121 24567889999999999999999999999987543
No 247
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=5.6e-36 Score=330.69 Aligned_cols=253 Identities=24% Similarity=0.347 Sum_probs=197.1
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC--ChhhHHHHHHHHHHHhccCCCceeeEEeEEE--cCCe
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN--DIESGDDLFREVSLLGRLRHRNIVRLLGYLH--NETN 771 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~--~~~~ 771 (1009)
+.++|+..+.||+|+||.||+|.+..+++.||+|++..... .......+.+|++++++++||||+++++++. +...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 45689999999999999999999999999999999864321 1233456779999999999999999999984 4567
Q ss_pred EEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccc
Q 037197 772 VMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLA 851 (1009)
Q Consensus 772 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls 851 (1009)
.++||||++++ +.+++..... ..+++..++.++.|+++||+|||++ +|+||||||+||+++.++.+||+|||.+
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~ 156 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPE--KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVA 156 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTT--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEehhccCC-HHHHHHhCcc--cccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccc
Confidence 89999999877 7777754332 2378899999999999999999999 9999999999999999999999999999
Q ss_pred eecccCC--CceeeecccCcccCCcccCCCC--CCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccc
Q 037197 852 RMMLHKN--ETVSMVAGSYGYIAPEYGYTLK--VDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKA 927 (1009)
Q Consensus 852 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~--~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 927 (1009)
....... .......|++.|+|||+..+.. .+.++||||||+++|||++|+.||... +..+..... ..+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-----~~~~~~~~i-~~~~~ 230 (305)
T 2wtk_C 157 EALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD-----NIYKLFENI-GKGSY 230 (305)
T ss_dssp EECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHHH-HHCCC
T ss_pred cccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc-----hHHHHHHHH-hcCCC
Confidence 8764322 2334566899999999877543 478999999999999999999999732 222222222 22110
Q ss_pred cccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 928 QDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.+...+. ..+.+++.+|++.||++||++.|+++
T Consensus 231 -------~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 231 -------AIPGDCG------PPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp -------CCCSSSC------HHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -------CCCCccC------HHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111111 24567889999999999999999996
No 248
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=338.17 Aligned_cols=262 Identities=22% Similarity=0.364 Sum_probs=198.8
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
.++|+..+.||+|+||.||+|.+.. .||+|++..........+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 3568889999999999999999875 3899998765444444455668999999999999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
||+++++|.+++.... ..+++..++.++.|+++||+|||+. +|+||||||+||+++ ++.+||+|||+++....
T Consensus 109 e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDAK---IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp BCCCSEEHHHHTTSSC---CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred ecccCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 9999999999997643 2378899999999999999999999 999999999999998 67999999999875432
Q ss_pred C-----CCceeeecccCcccCCcccCC---------CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHH
Q 037197 857 K-----NETVSMVAGSYGYIAPEYGYT---------LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMI 922 (1009)
Q Consensus 857 ~-----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 922 (1009)
. ........|++.|+|||+... ..++.++||||||+++|||++|+.||... ........ +
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~-----~~~~~~~~-~ 255 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ-----PAEAIIWQ-M 255 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC-----CHHHHHHH-H
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHH-h
Confidence 1 122334568999999998764 45788999999999999999999999732 11222222 2
Q ss_pred hhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCcccc
Q 037197 923 KSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRRKSI 985 (1009)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~~~~ 985 (1009)
..+.. ...... ... ..+.+++.+|++.||++||++.|++++|+++..+.+..
T Consensus 256 ~~~~~-~~~~~~----~~~------~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~ 307 (319)
T 2y4i_B 256 GTGMK-PNLSQI----GMG------KEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRL 307 (319)
T ss_dssp HTTCC-CCCCCS----SCC------TTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-------
T ss_pred ccCCC-CCCCcC----CCC------HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccC
Confidence 22111 111111 111 13567889999999999999999999999998776543
No 249
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=6e-36 Score=329.95 Aligned_cols=253 Identities=25% Similarity=0.412 Sum_probs=192.8
Q ss_pred HHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEc------
Q 037197 695 EILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHN------ 768 (1009)
Q Consensus 695 ~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~------ 768 (1009)
++.++|+..+.||+|+||.||+|++..+++.||||++... ....+.+.+|++++++++||||+++++++.+
T Consensus 3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (303)
T 1zy4_A 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT---EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK 79 (303)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC
T ss_pred cccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc---HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhh
Confidence 3567899999999999999999999988999999998542 3445667799999999999999999998754
Q ss_pred -------CCeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCC
Q 037197 769 -------ETNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANL 841 (1009)
Q Consensus 769 -------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~ 841 (1009)
....++||||+++|+|.++++... ..+++..++.++.|+++||+|||++ +|+||||||+||+++.++
T Consensus 80 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~ 153 (303)
T 1zy4_A 80 PMTAVKKKSTLFIQMEYCENGTLYDLIHSEN---LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESR 153 (303)
T ss_dssp ------CEEEEEEEEECCCSCBHHHHHHHSC---GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTS
T ss_pred hhcccccCCceEEEEecCCCCCHHHhhhccc---cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCC
Confidence 456899999999999999997543 2367888999999999999999999 999999999999999999
Q ss_pred cEEEcccccceecccCC--------------CceeeecccCcccCCcccCCC-CCCcccchHhHHHHHHHHHhCCCCCCC
Q 037197 842 EARIADFGLARMMLHKN--------------ETVSMVAGSYGYIAPEYGYTL-KVDEKSDIYSFGVVLLELLTGKMPLDP 906 (1009)
Q Consensus 842 ~~kl~DfGls~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlGvvl~elltg~~Pf~~ 906 (1009)
.+||+|||++....... .......|++.|+|||++.+. .++.++||||||+++|||++ ||..
T Consensus 154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~ 230 (303)
T 1zy4_A 154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST 230 (303)
T ss_dssp CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC
Confidence 99999999997653221 122345689999999998754 68999999999999999998 5542
Q ss_pred CCCCCccHHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 907 AFGGSKDIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
..+....... +... .....+.+.... ...+.+++.+|++.||++|||+.|+++
T Consensus 231 ----~~~~~~~~~~-~~~~---~~~~~~~~~~~~------~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 231 ----GMERVNILKK-LRSV---SIEFPPDFDDNK------MKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp ----HHHHHHHHHH-HHST---TCCCCTTCCTTT------SHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ----chhHHHHHHh-cccc---ccccCccccccc------hHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 1111222222 1111 111112222111 123567889999999999999999986
No 250
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2e-36 Score=329.49 Aligned_cols=253 Identities=25% Similarity=0.396 Sum_probs=196.2
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcC-CeEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNE-TNVMMV 775 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~-~~~~lV 775 (1009)
.++|+..+.||+|+||.||+|.+. ++.||||++... ...+.+.+|++++++++||||+++++++.+. +..++|
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv 93 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 93 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC----C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecch----hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEE
Confidence 356888999999999999999885 789999998543 2346677999999999999999999997554 578999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
|||+++++|.+++.... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 94 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 94 TEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp ECCCTTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred EecCCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccc
Confidence 99999999999996542 22368888999999999999999999 99999999999999999999999999997653
Q ss_pred cCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccccccCc
Q 037197 856 HKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDP 934 (1009)
Q Consensus 856 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1009)
.. .....+++.|+|||...+..++.++||||||+++|||++ |+.||..... .+.... +..+. .+
T Consensus 169 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--~~~~~~----~~~~~------~~ 233 (278)
T 1byg_A 169 ST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPR----VEKGY------KM 233 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG--GGHHHH----HTTTC------CC
T ss_pred cc---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHH----HhcCC------CC
Confidence 32 223457889999999888889999999999999999998 9999974321 122211 11111 11
Q ss_pred cccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCC
Q 037197 935 SIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPR 981 (1009)
Q Consensus 935 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~ 981 (1009)
.....++ ..+.+++.+|++.||++||++.|+++.|+++...
T Consensus 234 ~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 234 DAPDGCP------PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp CCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCcccCC------HHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 1111111 2466788999999999999999999999988643
No 251
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=340.45 Aligned_cols=257 Identities=21% Similarity=0.285 Sum_probs=187.3
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccC-CCceeeEEeEEE--------c
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLR-HRNIVRLLGYLH--------N 768 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~--------~ 768 (1009)
.+|+..+.||+|+||.||+|++..+++.||||++... .......+.+|+.+++++. ||||+++++++. .
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 4688899999999999999999999999999998543 3444566779999999996 999999999984 3
Q ss_pred CCeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCC--eEEeccCCCcEEeCCCCcEEEc
Q 037197 769 ETNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPP--VIHRDIKSNNILLDANLEARIA 846 (1009)
Q Consensus 769 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~dlk~~NIll~~~~~~kl~ 846 (1009)
....++||||++ |+|.+++..... ...+++.+++.++.||+.||+|||+. + |+||||||+||+++.++.+||+
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~ 180 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMES-RGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLC 180 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHT-TCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBC
T ss_pred CceEEEEEEecC-CCHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEe
Confidence 345899999995 789998865322 12389999999999999999999998 7 9999999999999999999999
Q ss_pred ccccceecccCCCc------------eeeecccCcccCCccc---CCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCC
Q 037197 847 DFGLARMMLHKNET------------VSMVAGSYGYIAPEYG---YTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGS 911 (1009)
Q Consensus 847 DfGls~~~~~~~~~------------~~~~~gt~~y~aPE~~---~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~ 911 (1009)
|||+++........ .....+|+.|+|||++ ....++.++||||||+++|||++|+.||......
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~- 259 (337)
T 3ll6_A 181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL- 259 (337)
T ss_dssp CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH-
Confidence 99999876433211 1134589999999987 5667889999999999999999999999632111
Q ss_pred ccHHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 912 KDIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
..+. .. .......... ..+.+++.+|++.||++||++.|+++.|+.+...+
T Consensus 260 ----~~~~----~~------~~~~~~~~~~------~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 260 ----RIVN----GK------YSIPPHDTQY------TVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp --------------------CCCCTTCCSS------GGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred ----Hhhc----Cc------ccCCcccccc------hHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 1110 00 0000001111 12456889999999999999999999999886543
No 252
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=9.4e-36 Score=340.90 Aligned_cols=312 Identities=16% Similarity=0.136 Sum_probs=223.3
Q ss_pred ccCCCCCeEecccCcccccCCccccccCccCcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCe
Q 037197 87 RGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLES 166 (1009)
Q Consensus 87 ~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~ 166 (1009)
..++++++|++++|.++...+..+..+++|++|+|++|.+.+..+..++.+++|++|+|++|++++..|..++++++|++
T Consensus 42 ~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 42 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 35688999999999987665556889999999999999998777778899999999999999998887888888999999
Q ss_pred eeccCCccCCcCCccccCccccceeeeccccccccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEeccCcc
Q 037197 167 LDFRGSFFEGSVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSL 246 (1009)
Q Consensus 167 L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 246 (1009)
|+|++|.++...+..|.++++|++|+|++|.+++..|..++.+++|++|++++|++++. .++.+++|++|++++|.+
T Consensus 122 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l 198 (390)
T 3o6n_A 122 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLL 198 (390)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCC
T ss_pred EECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccc
Confidence 99999988855555578888899999999888877777788888888888888888754 256677888888888877
Q ss_pred ccccCcccCCCCCCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCC
Q 037197 247 SGQIPPALGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKL 326 (1009)
Q Consensus 247 ~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l 326 (1009)
++. ...++|++|++++|.++.. |.. ..++|+.|++++|.+++. ..+..+++|++|++++|.+++..|..|
T Consensus 199 ~~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~ 268 (390)
T 3o6n_A 199 STL-----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPF 268 (390)
T ss_dssp SEE-----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGG
T ss_pred ccc-----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHc
Confidence 643 2335677777777777643 322 235667777777766643 356666666666666666666656666
Q ss_pred CCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccCCcCccCCCCCceeecccccccccCCcccccCccccE
Q 037197 327 GELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVR 406 (1009)
Q Consensus 327 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~ 406 (1009)
..+++|+.|++++|++++ +|..+..+++|+.|++++|+++ .+|..+..+++|++
T Consensus 269 ~~l~~L~~L~L~~n~l~~-------------------------~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~ 322 (390)
T 3o6n_A 269 VKMQRLERLYISNNRLVA-------------------------LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLEN 322 (390)
T ss_dssp TTCSSCCEEECCSSCCCE-------------------------EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSE
T ss_pred cccccCCEEECCCCcCcc-------------------------cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCE
Confidence 666666666666665543 2233334455555555555555 34445556666667
Q ss_pred EEcccCccccccCCccCCCCcccEEEeecccccc
Q 037197 407 VRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTG 440 (1009)
Q Consensus 407 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 440 (1009)
|++++|+++.. + +..+++|+.|++++|++++
T Consensus 323 L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 323 LYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp EECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred EECCCCcccee-C--chhhccCCEEEcCCCCccc
Confidence 77777766633 2 5566777777777777764
No 253
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=7.5e-37 Score=347.28 Aligned_cols=253 Identities=9% Similarity=0.046 Sum_probs=179.2
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCCh-hhHHHHHHHH---HHHhccCCCceeeEE-------eEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDI-ESGDDLFREV---SLLGRLRHRNIVRLL-------GYL 766 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~---~~l~~l~Hpniv~l~-------~~~ 766 (1009)
..|+..+.||+|+||.||+|.+..+++.||||++....... ...+.+.+|+ +.++. +||||++++ +++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence 34888899999999999999999999999999997764423 3344455775 45555 799988755 444
Q ss_pred EcC-----------------CeEEEEEeccCCCChhhhhcCCccccccccHHHH------HHHHHHHHHHHHHHHhcCCC
Q 037197 767 HNE-----------------TNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSR------YNIAVGIAQGLNYLHHDCQP 823 (1009)
Q Consensus 767 ~~~-----------------~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~------~~i~~~i~~~L~~LH~~~~~ 823 (1009)
... ...++||||++ |+|.++++.... .+++..+ +.++.||++||+|||++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~--- 213 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF---VYVFRGDEGILALHILTAQLIRLAANLQSK--- 213 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc---ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---
Confidence 432 33799999998 899999975422 1344455 67889999999999999
Q ss_pred CeEEeccCCCcEEeCCCCcEEEcccccceecccCCCceeeecccCcccCCcccCC--CCCCcccchHhHHHHHHHHHhCC
Q 037197 824 PVIHRDIKSNNILLDANLEARIADFGLARMMLHKNETVSMVAGSYGYIAPEYGYT--LKVDEKSDIYSFGVVLLELLTGK 901 (1009)
Q Consensus 824 ~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~SlGvvl~elltg~ 901 (1009)
+|+||||||+||+++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~ 290 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT---RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF 290 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTC---EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCC---CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999986532 2224567799999999877 67899999999999999999999
Q ss_pred CCCCCCCCCCccHHHHHHHHHhhcccccccc--CccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 902 MPLDPAFGGSKDIVEWVLSMIKSNKAQDEAL--DPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 902 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.||............ ........ ...+. ..... ...+.+++.+||+.||++|||+.|+++
T Consensus 291 ~Pf~~~~~~~~~~~~--------~~~~~~~~~~~~~~~-~~~~~---~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 291 LPFGLVTPGIKGSWK--------RPSLRVPGTDSLAFG-SCTPL---PDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CSTTBCCTTCTTCCC--------BCCTTSCCCCSCCCT-TSSCC---CHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCCcCcccccchh--------hhhhhhccccccchh-hccCC---CHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 999754322110000 00000000 00010 01111 124667889999999999999999874
No 254
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=3.7e-36 Score=347.39 Aligned_cols=199 Identities=27% Similarity=0.310 Sum_probs=172.8
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhcc------CCCceeeEEeEEEcC
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRL------RHRNIVRLLGYLHNE 769 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l------~Hpniv~l~~~~~~~ 769 (1009)
+..+|+..+.||+|+||.||+|.+..+++.||||++... ......+.+|+++++.+ +|+||+++++++...
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 171 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence 456799999999999999999999999999999999543 33445566788887776 578999999999999
Q ss_pred CeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCc--EEEcc
Q 037197 770 TNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLE--ARIAD 847 (1009)
Q Consensus 770 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~--~kl~D 847 (1009)
...++||||+. ++|.+++..... ..+++..+..++.||++||+|||+. +|+||||||+||+++.++. +||+|
T Consensus 172 ~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~D 245 (429)
T 3kvw_A 172 NHICMTFELLS-MNLYELIKKNKF--QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVID 245 (429)
T ss_dssp TEEEEEECCCC-CBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECC
T ss_pred CeEEEEEeccC-CCHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEee
Confidence 99999999995 689999876532 2278889999999999999999999 9999999999999999987 99999
Q ss_pred cccceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCC
Q 037197 848 FGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDP 906 (1009)
Q Consensus 848 fGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~ 906 (1009)
||+++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 246 FG~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~ 301 (429)
T 3kvw_A 246 FGSSCYEHQ---RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG 301 (429)
T ss_dssp CTTCEETTC---CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccceecCC---cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence 999976432 23345789999999999988999999999999999999999999974
No 255
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4e-36 Score=345.48 Aligned_cols=204 Identities=26% Similarity=0.371 Sum_probs=156.2
Q ss_pred HHhcCCc-CceeccCCceEEEEEEEC--CCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEE--cCC
Q 037197 696 ILACVKE-SNIIGMGGNGIVYKAEFH--RPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLH--NET 770 (1009)
Q Consensus 696 ~~~~~~~-~~~iG~G~~g~Vyk~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~--~~~ 770 (1009)
+.+.|.. .++||+|+||.||+|+++ .+++.||||++.... ....+.+|++++++++||||+++++++. .+.
T Consensus 18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 93 (405)
T 3rgf_A 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG----ISMSACREIALLRELKHPNVISLQKVFLSHADR 93 (405)
T ss_dssp HHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS----CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTT
T ss_pred hhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC----CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCC
Confidence 4455665 568999999999999976 457899999996432 2345779999999999999999999994 467
Q ss_pred eEEEEEeccCCCChhhhhcCCcc-----ccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEe----CCCC
Q 037197 771 NVMMVYDYMPNDSLGEALHGKEA-----GKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILL----DANL 841 (1009)
Q Consensus 771 ~~~lV~E~~~~gsL~~~l~~~~~-----~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll----~~~~ 841 (1009)
..++||||++ ++|.+++..... ....+++..++.|+.||+.||+|||+. +|+||||||+||++ +.++
T Consensus 94 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 94 KVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTT
T ss_pred eEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCC
Confidence 8999999996 578877753221 122388999999999999999999999 99999999999999 6778
Q ss_pred cEEEcccccceecccCC---CceeeecccCcccCCcccCC-CCCCcccchHhHHHHHHHHHhCCCCCCCC
Q 037197 842 EARIADFGLARMMLHKN---ETVSMVAGSYGYIAPEYGYT-LKVDEKSDIYSFGVVLLELLTGKMPLDPA 907 (1009)
Q Consensus 842 ~~kl~DfGls~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlGvvl~elltg~~Pf~~~ 907 (1009)
.+||+|||+++.+.... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 99999999998764332 23344678999999998876 45899999999999999999999999643
No 256
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=7.7e-36 Score=343.94 Aligned_cols=269 Identities=25% Similarity=0.343 Sum_probs=194.0
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcC------Ce
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNE------TN 771 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~------~~ 771 (1009)
..|+..+.||+|+||.||+|++..+++.||||++..... ...+|++++++++||||+++++++... .+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~ 127 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence 357888999999999999999999999999999854321 123799999999999999999988432 24
Q ss_pred EEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCC-CcEEEccccc
Q 037197 772 VMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDAN-LEARIADFGL 850 (1009)
Q Consensus 772 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~DfGl 850 (1009)
.++||||+++ ++.+.+.........+++..+..++.||++||+|||+. +|+||||||+||+++.+ +.+||+|||+
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchh
Confidence 6799999975 56666643222233488999999999999999999998 99999999999999965 5789999999
Q ss_pred ceecccCCCceeeecccCcccCCcccCCC-CCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHH-------H
Q 037197 851 ARMMLHKNETVSMVAGSYGYIAPEYGYTL-KVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSM-------I 922 (1009)
Q Consensus 851 s~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~-------~ 922 (1009)
++...... ......+|+.|+|||++.+. .++.++|||||||++|||++|+.||..... ...+.+.+... +
T Consensus 204 a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 204 AKQLVRGE-PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp CEECCTTC-CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCHHHH
T ss_pred hhhcccCC-CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHH
Confidence 98764332 33445789999999988654 789999999999999999999999974211 11122221110 0
Q ss_pred hh-ccccccccCccccccCch-H--HHHHHHHHHHHHHhccCCCCCCCCHHHHHH--HHhhc
Q 037197 923 KS-NKAQDEALDPSIAGQCKH-V--QEEMLLVLRIAVLCTAKLPKGRPTMRDVIT--MLGEA 978 (1009)
Q Consensus 923 ~~-~~~~~~~~~~~~~~~~~~-~--~~~~~~l~~l~~~cl~~dp~~RPs~~evl~--~L~~~ 978 (1009)
.. .....+...+.+....-. . .....++.+++.+|++.||++||++.|+++ .+.++
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~ 343 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 343 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccc
Confidence 00 000011111111100000 0 001135678999999999999999999985 44444
No 257
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2e-36 Score=334.61 Aligned_cols=260 Identities=28% Similarity=0.443 Sum_probs=225.2
Q ss_pred CCCceeeccCccccc--cCCcCccCCCCCceeeccc-ccccccCCcccccCccccEEEcccCccccccCCccCCCCcccE
Q 037197 354 SPLRRLDASSNLLSG--EIPTGLCDSGNLTKLILFN-NSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQR 430 (1009)
Q Consensus 354 ~~L~~L~Ls~N~l~~--~~~~~l~~l~~L~~L~l~~-N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 430 (1009)
..++.|++++|.+++ .+|..+..+++|++|++++ |.+.+.+|..+.++++|++|++++|++++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 356677777777776 6777777777777777774 7777777777888888888888888888778888888888888
Q ss_pred EEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCc-ccchhccccCcccCCcccccccCCcCcEEEeecCC
Q 037197 431 LEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIP-SLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNS 509 (1009)
Q Consensus 431 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~ 509 (1009)
|+|++|++++.+|..+..+++|++|++++|++++.+|..+..++ +|+.|++++|++++.+|..+..+. |+.|+|++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 88888888888888888888888888888888877888888887 888888888888888888888887 9999999999
Q ss_pred CCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCccccccccCcCcCCCCCCcEEecCCCccccCCCCC
Q 037197 510 LSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEGPVPSN 589 (1009)
Q Consensus 510 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~ 589 (1009)
+++.+|..|..+++|+.|+|++|++++.+|. +..+++|+.|||++|++++.+|..|..++.|++|+|++|+++|.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 9999999999999999999999999977766 888999999999999999999999999999999999999999999999
Q ss_pred CcccccCCcccccCcCCCCCCCCCCC
Q 037197 590 GILMNINPNELIGNAGLCGSVLPPCS 615 (1009)
Q Consensus 590 ~~~~~~~~~~~~~n~~lcg~~~~~c~ 615 (1009)
+.+.++....+.+|+++||.|+++|+
T Consensus 288 ~~l~~L~~l~l~~N~~lc~~p~~~C~ 313 (313)
T 1ogq_A 288 GNLQRFDVSAYANNKCLCGSPLPACT 313 (313)
T ss_dssp TTGGGSCGGGTCSSSEEESTTSSCCC
T ss_pred ccccccChHHhcCCCCccCCCCCCCC
Confidence 88999999999999999999998884
No 258
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.2e-36 Score=335.62 Aligned_cols=262 Identities=24% Similarity=0.349 Sum_probs=183.2
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
.++|+..+.||+|+||.||+|.+..+++.||||++..... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 3568889999999999999999988899999999854322 233456779999999999999999999999999999999
Q ss_pred eccCCCChhhhhcCCc----cccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccce
Q 037197 777 DYMPNDSLGEALHGKE----AGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLAR 852 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~----~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~ 852 (1009)
||+++++|.+++.... .....+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 9999999999986311 1123378999999999999999999999 99999999999999999999999999987
Q ss_pred ecccCC-----CceeeecccCcccCCcccCC-CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcc
Q 037197 853 MMLHKN-----ETVSMVAGSYGYIAPEYGYT-LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNK 926 (1009)
Q Consensus 853 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 926 (1009)
...... .......||+.|+|||.... ..++.++||||||+++|||++|+.||...... . ..........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~---~~~~~~~~~~ 244 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM--K---VLMLTLQNDP 244 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG--G---HHHHHHTSSC
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh--h---HHHHHhccCC
Confidence 654322 12234568999999998765 56899999999999999999999999743211 1 1111111111
Q ss_pred cc--ccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 927 AQ--DEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 927 ~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.. ....++....... ..+.+++.+|++.||++||++.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 245 PSLETGVQDKEMLKKYG------KSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CCTTC-----CCCCCCC------HHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred Cccccccccchhhhhhh------HHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00 0001111111111 24567889999999999999999986
No 259
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=6.1e-36 Score=338.84 Aligned_cols=260 Identities=24% Similarity=0.323 Sum_probs=200.5
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcC-----Ce
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNE-----TN 771 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~-----~~ 771 (1009)
.++|+..+.||+|+||.||+|.+..+++.||||++... ........+.+|++++++++||||+++++++... ..
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT-TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc-cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 45799999999999999999999999999999999643 2344456777999999999999999999999654 46
Q ss_pred EEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccc
Q 037197 772 VMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLA 851 (1009)
Q Consensus 772 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls 851 (1009)
.++||||++ |+|.+++.... +++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~iv~e~~~-~~L~~~l~~~~-----~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKTQH-----LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp EEEEEECCS-EEHHHHHHHCC-----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEcccC-cCHHHHHHhCC-----CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcce
Confidence 899999997 58999886532 78899999999999999999999 9999999999999999999999999999
Q ss_pred eecccCCC---ceeeecccCcccCCcccC-CCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccc
Q 037197 852 RMMLHKNE---TVSMVAGSYGYIAPEYGY-TLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKA 927 (1009)
Q Consensus 852 ~~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 927 (1009)
+....... ......||+.|+|||++. ...++.++||||+||++|||++|+.||.... ..+....+........
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~i~~~~~~~~- 252 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH--YLDQLNHILGILGSPS- 252 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSS--GGGHHHHHHHHHCSCC-
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCC--hHHHHHHHHHHhCCCC-
Confidence 87643322 224457899999999764 4458999999999999999999999997432 1222222221111100
Q ss_pred ccccc----------------Cc---cccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 928 QDEAL----------------DP---SIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 928 ~~~~~----------------~~---~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.+.. .+ ........ ...++.+++.+|++.||++|||+.|+++
T Consensus 253 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 253 -QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN---ADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp -HHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTT---SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -HHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCC---CCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000 00 00000000 1134678999999999999999999986
No 260
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=7.3e-36 Score=336.91 Aligned_cols=256 Identities=23% Similarity=0.294 Sum_probs=196.8
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCe-----
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETN----- 771 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~----- 771 (1009)
.++|...+.||+|+||.||+|.+..+|+.||||++............+.+|+.++++++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 456888899999999999999999999999999997655555556677899999999999999999999987653
Q ss_pred -EEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccc
Q 037197 772 -VMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGL 850 (1009)
Q Consensus 772 -~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGl 850 (1009)
.++||||++ ++|.+++... +++.++..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~~------~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGLK------FSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTSC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEecccc-CCHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999997 6888887432 78899999999999999999999 999999999999999999999999999
Q ss_pred ceecccCCCceeeecccCcccCCcccCC-CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhc-ccc
Q 037197 851 ARMMLHKNETVSMVAGSYGYIAPEYGYT-LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSN-KAQ 928 (1009)
Q Consensus 851 s~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~-~~~ 928 (1009)
++.... ......+|+.|+|||+..+ ..++.++||||||+++|||++|+.||.... ....+....... ...
T Consensus 173 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~~~~~~~i~~~~~~~~ 244 (353)
T 3coi_A 173 ARHADA---EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD-----YLDQLTQILKVTGVPG 244 (353)
T ss_dssp TTC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC-----HHHHHHHHHHHHCBCC
T ss_pred ccCCCC---CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHhCCCC
Confidence 976432 2334578999999998776 678999999999999999999999997421 112222111110 000
Q ss_pred c-------------------cccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 929 D-------------------EALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 929 ~-------------------~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
. ....+.+...... ....+.+++.+|++.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 245 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPR---ASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTT---SCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCC---cCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 0000011111111 1234667889999999999999999985
No 261
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=3.9e-36 Score=340.30 Aligned_cols=267 Identities=19% Similarity=0.244 Sum_probs=186.5
Q ss_pred HHHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCe--
Q 037197 694 SEILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETN-- 771 (1009)
Q Consensus 694 ~~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~-- 771 (1009)
....++|+..+.||+|+||.||+|.+..+++.||||++.... .....+.+|++.++.++||||+++++++.....
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP---RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT---TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc---cccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 445678999999999999999999999999999999985542 233456788888999999999999999865433
Q ss_pred -----EEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHH--hcCCCCeEEeccCCCcEEeCC-CCcE
Q 037197 772 -----VMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLH--HDCQPPVIHRDIKSNNILLDA-NLEA 843 (1009)
Q Consensus 772 -----~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH--~~~~~~ivH~dlk~~NIll~~-~~~~ 843 (1009)
.++||||+++ +|.+.+.........+++..+..++.|++.|++||| +. +|+||||||+||+++. ++.+
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~ 171 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTL 171 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcE
Confidence 7899999976 455444322222334788889999999999999999 77 9999999999999997 8999
Q ss_pred EEcccccceecccCCCceeeecccCcccCCcccCCC-CCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHH
Q 037197 844 RIADFGLARMMLHKNETVSMVAGSYGYIAPEYGYTL-KVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMI 922 (1009)
Q Consensus 844 kl~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 922 (1009)
||+|||+++...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.... ....+....
T Consensus 172 kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~-----~~~~~~~~~ 245 (360)
T 3e3p_A 172 KLCDFGSAKKLSPSE-PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDN-----SAGQLHEIV 245 (360)
T ss_dssp EECCCTTCBCCCTTS-CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHH
T ss_pred EEeeCCCceecCCCC-CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCC-----hHHHHHHHH
Confidence 999999998764332 33445689999999987654 48999999999999999999999997421 111111111
Q ss_pred hhc-ccccc--------ccCccccc--------cCc-hHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 923 KSN-KAQDE--------ALDPSIAG--------QCK-HVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 923 ~~~-~~~~~--------~~~~~~~~--------~~~-~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
... ....+ ..+..... ... ........+.+++.+|++.||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 246 RVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 110 00000 00000000 000 00012345778999999999999999999986
No 262
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.3e-35 Score=358.45 Aligned_cols=336 Identities=18% Similarity=0.172 Sum_probs=251.5
Q ss_pred CCCccEEEeccCccccccCcccCCCCCCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCCCeEe
Q 037197 233 LTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLN 312 (1009)
Q Consensus 233 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 312 (1009)
+++++.|++++|.+....+..|+.+++|+.|+|++|.+++..|..|..+++|++|+|++|.+++..|..|+.+++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 56788899999888876666778888888888888888887777888888888888888888887777788888888888
Q ss_pred ccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccCCcCccCCCCCceeecccccccc
Q 037197 313 LMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSG 392 (1009)
Q Consensus 313 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~ 392 (1009)
|++|.+++.++..|+++++|++|+|++|.+++..|..+..+++|+.|++++|.+++.. +..+++|+.|++++|.+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc
Confidence 8888888777777788888888888888877777777777777777777777766432 3334455555555555442
Q ss_pred cCCcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccC
Q 037197 393 TFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILS 472 (1009)
Q Consensus 393 ~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 472 (1009)
+ ...++|+.|++++|.++...+. + .++|+.|+|++|.+++ +..+..
T Consensus 207 -----l------------------------~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~~--~~~l~~ 252 (597)
T 3oja_B 207 -----L------------------------AIPIAVEELDASHNSINVVRGP-V--NVELTILKLQHNNLTD--TAWLLN 252 (597)
T ss_dssp -----E------------------------ECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCCC--CGGGGG
T ss_pred -----c------------------------cCCchhheeeccCCcccccccc-c--CCCCCEEECCCCCCCC--Chhhcc
Confidence 1 1223455556666555532221 1 2466677777777765 356677
Q ss_pred CcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceec
Q 037197 473 IPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILD 552 (1009)
Q Consensus 473 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 552 (1009)
+++|+.|++++|.+++.+|..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+
T Consensus 253 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~ 330 (597)
T 3oja_B 253 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 330 (597)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred CCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEE
Confidence 7777777777777777777888888888888888888885 5666777888999999999888 6788888899999999
Q ss_pred CCccccccccCcCcCCCCCCcEEecCCCccccCCCCCCcccccCCcccccCcCCCCCCC
Q 037197 553 MSNNSLFGRIPENFGASPALEMLNLSYNKLEGPVPSNGILMNINPNELIGNAGLCGSVL 611 (1009)
Q Consensus 553 Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~lcg~~~ 611 (1009)
|++|+|++.. +..++.|+.|+|++|++++..+ ...+..+....+.+++..|+.+.
T Consensus 331 L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~-~~~~~~~~~~~~~~~~~~C~~~~ 385 (597)
T 3oja_B 331 LDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSL-RALFRNVARPAVDDADQHCKIDY 385 (597)
T ss_dssp CCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHH-HHHTTTCCTTTBCCCCCCCCTTC
T ss_pred CCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhH-HHHHHHHhhhccccccccCCcch
Confidence 9999988653 6677889999999999988643 23466777788899999998754
No 263
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.1e-35 Score=341.53 Aligned_cols=266 Identities=23% Similarity=0.277 Sum_probs=200.1
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccC--------CCceeeEEeEEE-
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLR--------HRNIVRLLGYLH- 767 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--------Hpniv~l~~~~~- 767 (1009)
.++|+..+.||+|+||.||+|++..+++.||||++... ....+.+.+|++++++++ ||||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 46799999999999999999999999999999999533 344566779999999985 788999999987
Q ss_pred ---cCCeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCC---
Q 037197 768 ---NETNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANL--- 841 (1009)
Q Consensus 768 ---~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~--- 841 (1009)
++...++||||+ ++++.+++..... ..+++..++.++.||++||+|||+++ +|+||||||+||+++.++
T Consensus 113 ~~~~~~~~~lv~e~~-~~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~ 187 (397)
T 1wak_A 113 SGVNGTHICMVFEVL-GHHLLKWIIKSNY--QGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYI 187 (397)
T ss_dssp EETTEEEEEEEECCC-CCBHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHH
T ss_pred cCCCCceEEEEEecc-CccHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhh
Confidence 566899999999 5566665543321 23788999999999999999999853 899999999999999875
Q ss_pred ----------------------------------------------cEEEcccccceecccCCCceeeecccCcccCCcc
Q 037197 842 ----------------------------------------------EARIADFGLARMMLHKNETVSMVAGSYGYIAPEY 875 (1009)
Q Consensus 842 ----------------------------------------------~~kl~DfGls~~~~~~~~~~~~~~gt~~y~aPE~ 875 (1009)
.+||+|||+++..... .....||+.|+|||+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHH
T ss_pred hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChh
Confidence 7999999999876432 334578999999999
Q ss_pred cCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCcc-HHHHHHHHHhh-----------ccccccccCcc--------
Q 037197 876 GYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKD-IVEWVLSMIKS-----------NKAQDEALDPS-------- 935 (1009)
Q Consensus 876 ~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~-~~~~~~~~~~~-----------~~~~~~~~~~~-------- 935 (1009)
+.+..++.++|||||||++|||++|+.||......... ....+...... +....+.+...
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 98888999999999999999999999999754332211 11111111110 00000000000
Q ss_pred ---------ccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 936 ---------IAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 936 ---------~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
+........+....+.+++.+||+.||++|||+.|+++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00011112334456788999999999999999999974
No 264
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1e-35 Score=331.88 Aligned_cols=270 Identities=24% Similarity=0.314 Sum_probs=201.5
Q ss_pred HHhcCCcCceeccCCceEEEEEEEC-CCCeEEEEEEcccCCCChhhHHHHHHHHHHHhcc---CCCceeeEEeEEE----
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFH-RPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRL---RHRNIVRLLGYLH---- 767 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~Hpniv~l~~~~~---- 767 (1009)
..++|+..+.||+|+||.||+|.+. .+++.||+|++............+.+|+++++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 3467899999999999999999995 6689999999865433333334455677766665 8999999999987
Q ss_pred -cCCeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEc
Q 037197 768 -NETNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIA 846 (1009)
Q Consensus 768 -~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 846 (1009)
.....++||||++ |+|.+++..... ..+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 5567899999997 699999875432 2378889999999999999999999 99999999999999999999999
Q ss_pred ccccceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcc
Q 037197 847 DFGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNK 926 (1009)
Q Consensus 847 DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 926 (1009)
|||+++..... .......+++.|+|||+..+..++.++||||||+++|||++|+.||.... ..+....+.......
T Consensus 163 Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~~~- 238 (326)
T 1blx_A 163 DFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS--DVDQLGKILDVIGLP- 238 (326)
T ss_dssp SCCSCCCCCGG-GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCC-
T ss_pred cCcccccccCC-CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHHHHcCCC-
Confidence 99999865432 23344678999999999988889999999999999999999999997421 111122222111100
Q ss_pred ccccccC---------------ccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH--HHhhcC
Q 037197 927 AQDEALD---------------PSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT--MLGEAK 979 (1009)
Q Consensus 927 ~~~~~~~---------------~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~--~L~~~~ 979 (1009)
...... ..+........ ..+.+++.+|++.||++||++.|+++ .+.++.
T Consensus 239 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~ 304 (326)
T 1blx_A 239 -GEEDWPRDVALPRQAFHSKSAQPIEKFVTDID---ELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE 304 (326)
T ss_dssp -CGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCC---HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred -CcccCccccccchhhhcccCcchhhhccccCC---HHHHHHHHHHcCCCcccCCCHHHHhcCccccccc
Confidence 000000 00011111111 24567889999999999999999984 344443
No 265
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=6.2e-36 Score=336.98 Aligned_cols=263 Identities=22% Similarity=0.309 Sum_probs=200.6
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChh---------------hHHHHHHHHHHHhccCCCceee
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIE---------------SGDDLFREVSLLGRLRHRNIVR 761 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~E~~~l~~l~Hpniv~ 761 (1009)
.++|+..+.||+|+||.||+|.+ +++.||||++........ ..+.+.+|++++++++||||++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 45788999999999999999999 689999999864321111 1167779999999999999999
Q ss_pred EEeEEEcCCeEEEEEeccCCCChhhh------hcCCccccccccHHHHHHHHHHHHHHHHHHHh-cCCCCeEEeccCCCc
Q 037197 762 LLGYLHNETNVMMVYDYMPNDSLGEA------LHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHH-DCQPPVIHRDIKSNN 834 (1009)
Q Consensus 762 l~~~~~~~~~~~lV~E~~~~gsL~~~------l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~dlk~~N 834 (1009)
+++++.+.+..++||||+++++|.++ +.... ...+++..++.++.|+++||+|||+ . +|+||||||+|
T Consensus 108 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~N 182 (348)
T 2pml_X 108 CEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY--TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSN 182 (348)
T ss_dssp CSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS--CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGG
T ss_pred EEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc--ccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHh
Confidence 99999999999999999999999999 54321 2348999999999999999999998 7 99999999999
Q ss_pred EEeCCCCcEEEcccccceecccCCCceeeecccCcccCCcccCCC-CCCc-ccchHhHHHHHHHHHhCCCCCCCCCCCCc
Q 037197 835 ILLDANLEARIADFGLARMMLHKNETVSMVAGSYGYIAPEYGYTL-KVDE-KSDIYSFGVVLLELLTGKMPLDPAFGGSK 912 (1009)
Q Consensus 835 Ill~~~~~~kl~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDv~SlGvvl~elltg~~Pf~~~~~~~~ 912 (1009)
|+++.++.+||+|||.+...... ......+++.|+|||...+. .++. ++||||||+++|||++|+.||......
T Consensus 183 il~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-- 258 (348)
T 2pml_X 183 ILMDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-- 258 (348)
T ss_dssp EEECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS--
T ss_pred EEEcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH--
Confidence 99999999999999999875332 34456789999999998876 5666 999999999999999999999743221
Q ss_pred cHHHHHHHHHhhcccccccc-----CccccccCc-hHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 913 DIVEWVLSMIKSNKAQDEAL-----DPSIAGQCK-HVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.+.... +..+....... .+....... ........+.+++.+|++.||++||++.|+++
T Consensus 259 --~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 259 --VELFNN-IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp --HHHHHH-HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred --HHHHHH-HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 122211 22111100000 000000000 00111234678899999999999999999986
No 266
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.8e-36 Score=331.10 Aligned_cols=259 Identities=25% Similarity=0.348 Sum_probs=191.2
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEE--------
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLH-------- 767 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~-------- 767 (1009)
+.++|+..+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|++++++++||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 86 (320)
T 2i6l_A 9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD 86 (320)
T ss_dssp ETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred cCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence 346788999999999999999999999999999998543 3455567779999999999999999999874
Q ss_pred ------cCCeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeC-CC
Q 037197 768 ------NETNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLD-AN 840 (1009)
Q Consensus 768 ------~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~-~~ 840 (1009)
+....++||||++ |+|.+++... .+++..++.++.|+++||+|||+. +|+||||||+||+++ ++
T Consensus 87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 157 (320)
T 2i6l_A 87 DVGSLTELNSVYIVQEYME-TDLANVLEQG-----PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTED 157 (320)
T ss_dssp ----CCSCSEEEEEEECCS-EEHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTT
T ss_pred ccccccccCceeEEeeccC-CCHHHHhhcC-----CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCC
Confidence 3467899999997 6999999643 278888999999999999999999 999999999999997 56
Q ss_pred CcEEEcccccceecccCC---CceeeecccCcccCCcccCC-CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHH
Q 037197 841 LEARIADFGLARMMLHKN---ETVSMVAGSYGYIAPEYGYT-LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVE 916 (1009)
Q Consensus 841 ~~~kl~DfGls~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~ 916 (1009)
+.+||+|||+++...... .......+++.|+|||.... ..++.++||||||+++|||++|+.||.... ...
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~~~ 232 (320)
T 2i6l_A 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH-----ELE 232 (320)
T ss_dssp TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHH
T ss_pred CeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC-----HHH
Confidence 799999999998654321 12233457889999998754 678999999999999999999999997422 112
Q ss_pred HHHHHHhhcccccc-----------------ccCc--cccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 917 WVLSMIKSNKAQDE-----------------ALDP--SIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 917 ~~~~~~~~~~~~~~-----------------~~~~--~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.............. ...+ ........ ...++.+++.+|++.||++||++.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 233 QMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPG---ISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTT---CCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcch---hhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 22211111100000 0000 00000001 1234678899999999999999999975
No 267
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.1e-35 Score=337.96 Aligned_cols=336 Identities=18% Similarity=0.176 Sum_probs=238.9
Q ss_pred CCCccEEEeccCccccccCcccCCCCCCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCCCeEe
Q 037197 233 LTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLN 312 (1009)
Q Consensus 233 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 312 (1009)
+++|++|++++|.++...+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..+..+++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 56788888888888765555577888888888888888877777788888888888888888877777778888888888
Q ss_pred ccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccCCcCccCCCCCceeecccccccc
Q 037197 313 LMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSG 392 (1009)
Q Consensus 313 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~ 392 (1009)
+++|+++...+..|.++++|++|++++|.+.+..+..+..+++|+.|++++|.+++. .+..+++|+.|++++|.+++
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~ 200 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST 200 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc
Confidence 888888866666677788888888887777776666677777777777777766643 13334455555555554442
Q ss_pred cCCcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccC
Q 037197 393 TFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILS 472 (1009)
Q Consensus 393 ~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 472 (1009)
+. ..++|+.|++++|+++.. |.. ..++|+.|++++|++++. ..+..
T Consensus 201 -----~~------------------------~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~ 246 (390)
T 3o6n_A 201 -----LA------------------------IPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLN 246 (390)
T ss_dssp -----EE------------------------CCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGG
T ss_pred -----cC------------------------CCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcC
Confidence 11 223455555555555532 222 135666666666666653 45666
Q ss_pred CcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceec
Q 037197 473 IPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILD 552 (1009)
Q Consensus 473 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 552 (1009)
+++|++|++++|.+++..|..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+
T Consensus 247 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~ 324 (390)
T 3o6n_A 247 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 324 (390)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred CCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEE
Confidence 7777777777777777777777888888888888888874 5666677888888888888887 5777788888888888
Q ss_pred CCccccccccCcCcCCCCCCcEEecCCCccccCCCCCCcccccCCcccccCcCCCCCCC
Q 037197 553 MSNNSLFGRIPENFGASPALEMLNLSYNKLEGPVPSNGILMNINPNELIGNAGLCGSVL 611 (1009)
Q Consensus 553 Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~lcg~~~ 611 (1009)
|++|++++.. +..++.|+.|++++|++++.-. ...+..+....+.+++..|+.+.
T Consensus 325 L~~N~i~~~~---~~~~~~L~~L~l~~N~~~~~~~-~~~~~~~~~~~~~~~~~~c~~~~ 379 (390)
T 3o6n_A 325 LDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSL-RALFRNVARPAVDDADQHCKIDY 379 (390)
T ss_dssp CCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHH-HHHTTTCCTTTBCCCCSCCCTTC
T ss_pred CCCCccceeC---chhhccCCEEEcCCCCccchhH-HHHHHHHHhhcccccCceecccc
Confidence 8888887552 6677888999999999887432 22345566667788888887543
No 268
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.9e-35 Score=355.42 Aligned_cols=350 Identities=15% Similarity=0.120 Sum_probs=241.6
Q ss_pred CCCCCCCCCCccccCCcCCce----eeeEEeCCCCceeEEeccccccccccccccccCCCCCeEecccCcccccCCcccc
Q 037197 36 NMLEDWKMPSNAAENGLLHCN----WTGVWCNSRGFVEKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSLPKSLA 111 (1009)
Q Consensus 36 ~~l~~W~~~~~~~~~~~~~C~----w~gv~C~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~ 111 (1009)
..+++|.+. .+||. |.+|.|+. .++........ ...-..+++++.|++++|.++...+..+.
T Consensus 7 ~~l~~~~~~-------~~C~~~~~~~~c~~~~~-----~i~~~~~~~~~--~~~~l~l~~l~~l~l~~~~l~~lp~~~~~ 72 (597)
T 3oja_B 7 YNVKPRQPE-------YKCIDSNLQYDCVFYDV-----HIDMQTQDVYF--GFEDITLNNQKIVTFKNSTMRKLPAALLD 72 (597)
T ss_dssp ----CCCSE-------ECCCCC--CCSEEECSC-----EECSSCCCCEE--SCSSGGGCCCSEEEESSCEESEECTHHHH
T ss_pred ccccCCCCC-------CcCcccCcCceeEecCc-----eeccccccccc--CcccccCCCceEEEeeCCCCCCcCHHHHc
Confidence 357889743 34663 77777752 12222211111 11123467889999999998776666788
Q ss_pred ccCccCcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCCcCCccccCcccccee
Q 037197 112 NLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVPTSFRNLQKLKFL 191 (1009)
Q Consensus 112 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L 191 (1009)
++++|++|+|++|.+.+..|..++.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|
T Consensus 73 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 152 (597)
T 3oja_B 73 SFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTL 152 (597)
T ss_dssp HCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEE
Confidence 99999999999999988778889999999999999999998888888889999999999998886666667888889999
Q ss_pred eeccccccccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEeccCccccccCcccCCCCCCcEEEcccCCcC
Q 037197 192 GLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFT 271 (1009)
Q Consensus 192 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 271 (1009)
+|++|.+++..|..|+.+++|++|+|++|.+++.. ++.+++|++|++++|.+++. ....+|+.|++++|.++
T Consensus 153 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l-----~~~~~L~~L~ls~n~l~ 224 (597)
T 3oja_B 153 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSIN 224 (597)
T ss_dssp ECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEE-----ECCTTCSEEECCSSCCC
T ss_pred EeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccc-----cCCchhheeeccCCccc
Confidence 99988888877778888888888888888887542 55677788888888877643 23456777777777776
Q ss_pred CCCCcccccccccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCcccc
Q 037197 272 GKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLG 351 (1009)
Q Consensus 272 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 351 (1009)
...+ .+ .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++.+|..|..+++|+.|+|++|.+++
T Consensus 225 ~~~~-~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~------- 292 (597)
T 3oja_B 225 VVRG-PV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA------- 292 (597)
T ss_dssp EEEC-SC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-------
T ss_pred cccc-cc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-------
Confidence 4322 22 2456666666666654 2455666666666666666666555556666666555555555543
Q ss_pred CCCCCceeeccCccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCccccccCCccCCCCcccEE
Q 037197 352 QSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRL 431 (1009)
Q Consensus 352 ~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 431 (1009)
+|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|.+++. | +..+++|+.|
T Consensus 293 ------------------l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L 350 (597)
T 3oja_B 293 ------------------LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNL 350 (597)
T ss_dssp ------------------EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEE
T ss_pred ------------------CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEE
Confidence 2333444556666666666666 4555666777777777777777643 2 5667788888
Q ss_pred Eeeccccccc
Q 037197 432 EMANNNLTGQ 441 (1009)
Q Consensus 432 ~L~~N~l~~~ 441 (1009)
++++|.+++.
T Consensus 351 ~l~~N~~~~~ 360 (597)
T 3oja_B 351 TLSHNDWDCN 360 (597)
T ss_dssp ECCSSCEEHH
T ss_pred EeeCCCCCCh
Confidence 8888888754
No 269
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.9e-35 Score=333.69 Aligned_cols=267 Identities=20% Similarity=0.295 Sum_probs=200.0
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcC-----C
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNE-----T 770 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~-----~ 770 (1009)
+.++|+..+.||+|+||.||+|.+..+++.||||++... ........+.+|++++++++||||+++++++... .
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF-DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc-ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 356788999999999999999999999999999999543 2344456677999999999999999999998654 6
Q ss_pred eEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccc
Q 037197 771 NVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGL 850 (1009)
Q Consensus 771 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGl 850 (1009)
..++||||++ ++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVISTQ-----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEeccC-ccHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 7899999996 6899988653 278899999999999999999999 999999999999999999999999999
Q ss_pred ceecccCCC----------ceeeecccCcccCCcccC-CCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHH
Q 037197 851 ARMMLHKNE----------TVSMVAGSYGYIAPEYGY-TLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVL 919 (1009)
Q Consensus 851 s~~~~~~~~----------~~~~~~gt~~y~aPE~~~-~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~ 919 (1009)
++....... ......||+.|+|||++. ...++.++|||||||++|||++|+.||..... .+....+.
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~ 236 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY--RHQLLLIF 236 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHH
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHH
Confidence 987643221 112346899999999765 46789999999999999999999999973211 11111111
Q ss_pred HHHhhcccccccc-------------------CccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH--HHhhc
Q 037197 920 SMIKSNKAQDEAL-------------------DPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT--MLGEA 978 (1009)
Q Consensus 920 ~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~--~L~~~ 978 (1009)
....... ..... ......... ....++.+++.+|++.||++|||+.|+++ .+...
T Consensus 237 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 312 (353)
T 2b9h_A 237 GIIGTPH-SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFP---RVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTY 312 (353)
T ss_dssp HHHCCCC-STTTTTTCCCHHHHHHHHTSCCCCCCCHHHHST---TSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred HHhCCCc-hhccccccccchhhHHhhcccCCCCcchhhhcc---cCCHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence 1111000 00000 000000000 11234668899999999999999999987 44443
No 270
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=3.4e-35 Score=334.93 Aligned_cols=201 Identities=24% Similarity=0.269 Sum_probs=171.2
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccC-CC-----ceeeEEeEEEcC
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLR-HR-----NIVRLLGYLHNE 769 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-Hp-----niv~l~~~~~~~ 769 (1009)
+.++|+..+.||+|+||+||+|.+..+++.||||++... .....++..|+++++.++ |+ +|+++++++...
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 457899999999999999999999999999999999533 333455668888888874 55 499999999999
Q ss_pred CeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeC--CCCcEEEcc
Q 037197 770 TNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLD--ANLEARIAD 847 (1009)
Q Consensus 770 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~--~~~~~kl~D 847 (1009)
+..++||||++ ++|.+++...... .+++..+..++.|++.||+|||++ ..+|+||||||+||+++ .++.+||+|
T Consensus 129 ~~~~lv~e~~~-~~L~~~l~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 129 NHLCLVFEMLS-YNLYDLLRNTNFR--GVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp TEEEEEEECCC-CBHHHHHHHTTTS--CCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred CceEEEEecCC-CCHHHHHhhcCcC--CCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 99999999995 5999999765322 278889999999999999999953 23999999999999995 477899999
Q ss_pred cccceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCC
Q 037197 848 FGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDP 906 (1009)
Q Consensus 848 fGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~ 906 (1009)
||+++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 205 FG~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 205 FGSSCQLGQ---RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp CTTCEETTC---CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccCceeccc---ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999987633 23346789999999999998999999999999999999999999974
No 271
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.6e-35 Score=338.57 Aligned_cols=260 Identities=22% Similarity=0.314 Sum_probs=188.4
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCC------
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNET------ 770 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~------ 770 (1009)
..+|+..+.||+|+||.||+|++..+++ ||+|++...... ..+|+++++.++||||+++++++....
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~ 111 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEV 111 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCce
Confidence 3568899999999999999999988665 888887543211 127999999999999999999985433
Q ss_pred eEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeC-CCCcEEEcccc
Q 037197 771 NVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLD-ANLEARIADFG 849 (1009)
Q Consensus 771 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~-~~~~~kl~DfG 849 (1009)
..++||||++++.+....+ .......+++..+..++.||++||+|||+. +|+||||||+||+++ .++.+||+|||
T Consensus 112 ~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG 187 (394)
T 4e7w_A 112 FLNLVLEYVPETVYRASRH-YAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFG 187 (394)
T ss_dssp EEEEEEECCSEEHHHHHHH-HHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEEEEeeccCccHHHHHHH-HHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCC
Confidence 3789999998754433332 111223378889999999999999999999 999999999999999 78999999999
Q ss_pred cceecccCCCceeeecccCcccCCcccCCC-CCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhh-ccc
Q 037197 850 LARMMLHKNETVSMVAGSYGYIAPEYGYTL-KVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKS-NKA 927 (1009)
Q Consensus 850 ls~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~-~~~ 927 (1009)
+++..... .......+|+.|+|||++.+. .++.++||||+||++|||++|+.||.... ........... +..
T Consensus 188 ~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~-----~~~~l~~i~~~~g~p 261 (394)
T 4e7w_A 188 SAKILIAG-EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES-----GIDQLVEIIKVLGTP 261 (394)
T ss_dssp TCEECCTT-CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHHHCCC
T ss_pred CcccccCC-CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHhCCC
Confidence 99876433 233445789999999987654 58999999999999999999999997321 11111111111 000
Q ss_pred c--------ccccCccccccCch-HH-----HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 928 Q--------DEALDPSIAGQCKH-VQ-----EEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 928 ~--------~~~~~~~~~~~~~~-~~-----~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
. .......+...... .. ....++.+++.+|++.||++|||+.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 262 SREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp CHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 0 00000001000000 00 01135678899999999999999999986
No 272
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=4.1e-35 Score=328.92 Aligned_cols=263 Identities=20% Similarity=0.244 Sum_probs=199.6
Q ss_pred HhcCCcCceeccCCceEEEEEEE-CCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCC------ceeeEEeEEEcC
Q 037197 697 LACVKESNIIGMGGNGIVYKAEF-HRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHR------NIVRLLGYLHNE 769 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hp------niv~l~~~~~~~ 769 (1009)
.++|+..+.||+|+||.||+|.+ ..+++.||||++... ....+.+.+|+++++.++|+ +++++++++.+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~ 89 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH 89 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence 46789999999999999999998 557899999998543 34456677899999988665 499999999999
Q ss_pred CeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCC----------
Q 037197 770 TNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDA---------- 839 (1009)
Q Consensus 770 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~---------- 839 (1009)
+..++||||+ +++|.+++..... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.
T Consensus 90 ~~~~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 90 GHICIVFELL-GLSTYDFIKENGF--LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC--
T ss_pred CcEEEEEcCC-CCCHHHHHHhcCC--CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCc
Confidence 9999999999 8999999975432 2378889999999999999999999 9999999999999987
Q ss_pred ---------CCcEEEcccccceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCC
Q 037197 840 ---------NLEARIADFGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGG 910 (1009)
Q Consensus 840 ---------~~~~kl~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~ 910 (1009)
++.+||+|||+++.... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-- 238 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDE---HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD-- 238 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTS---CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC--
T ss_pred cccccccccCCCceEeeCcccccCcc---ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--
Confidence 66899999999986432 2334578999999999998899999999999999999999999997421
Q ss_pred CccHHHHHHHHHhhcc-------cccccc-------C-------------ccccccCchHHHHHHHHHHHHHHhccCCCC
Q 037197 911 SKDIVEWVLSMIKSNK-------AQDEAL-------D-------------PSIAGQCKHVQEEMLLVLRIAVLCTAKLPK 963 (1009)
Q Consensus 911 ~~~~~~~~~~~~~~~~-------~~~~~~-------~-------------~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~ 963 (1009)
..+....+........ .....+ . ................+.+++.+|++.||+
T Consensus 239 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 318 (339)
T 1z57_A 239 SKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPA 318 (339)
T ss_dssp HHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred hHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcc
Confidence 1111111111110000 000000 0 000000000112234577899999999999
Q ss_pred CCCCHHHHHH
Q 037197 964 GRPTMRDVIT 973 (1009)
Q Consensus 964 ~RPs~~evl~ 973 (1009)
+|||+.|+++
T Consensus 319 ~Rpt~~ell~ 328 (339)
T 1z57_A 319 KRITLREALK 328 (339)
T ss_dssp TSCCHHHHTT
T ss_pred cccCHHHHhc
Confidence 9999999874
No 273
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1e-35 Score=337.00 Aligned_cols=266 Identities=21% Similarity=0.276 Sum_probs=192.2
Q ss_pred HHHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCCh---------hhHHHHHHHHHHHhccCCCceeeEEe
Q 037197 694 SEILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDI---------ESGDDLFREVSLLGRLRHRNIVRLLG 764 (1009)
Q Consensus 694 ~~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~---------~~~~~~~~E~~~l~~l~Hpniv~l~~ 764 (1009)
..+.++|+..+.||+|+||.||+|.+.. ++.||||++....... ...+.+.+|++++++++||||+++++
T Consensus 18 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 96 (362)
T 3pg1_A 18 HAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRD 96 (362)
T ss_dssp HHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSE
T ss_pred HHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceee
Confidence 4556789999999999999999999876 8999999986543221 12366779999999999999999999
Q ss_pred EEEc-----CCeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCC
Q 037197 765 YLHN-----ETNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDA 839 (1009)
Q Consensus 765 ~~~~-----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~ 839 (1009)
++.. ....++||||++ |+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.
T Consensus 97 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~ 169 (362)
T 3pg1_A 97 IFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR---IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLAD 169 (362)
T ss_dssp EEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECT
T ss_pred eEEeccCCCcceEEEEEccCC-CCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcC
Confidence 9843 346899999997 68888886543 2378999999999999999999999 9999999999999999
Q ss_pred CCcEEEcccccceecccCCCceeeecccCcccCCcccCC-CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHH
Q 037197 840 NLEARIADFGLARMMLHKNETVSMVAGSYGYIAPEYGYT-LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWV 918 (1009)
Q Consensus 840 ~~~~kl~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~ 918 (1009)
++.+||+|||+++..... .......+|+.|+|||+..+ ..++.++||||+||++|+|++|+.||... ......
T Consensus 170 ~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~-----~~~~~~ 243 (362)
T 3pg1_A 170 NNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS-----TFYNQL 243 (362)
T ss_dssp TCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHH
T ss_pred CCCEEEEecCcccccccc-cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCC-----CHHHHH
Confidence 999999999999754322 23344578999999998776 67899999999999999999999999742 111222
Q ss_pred HHHHhhcccc-------------ccccCccccccCch-----HHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 919 LSMIKSNKAQ-------------DEALDPSIAGQCKH-----VQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 919 ~~~~~~~~~~-------------~~~~~~~~~~~~~~-----~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.......... .............. .......+.+++.+|++.||++|||+.|+++
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 2111110000 00000000000000 0011234678999999999999999999986
No 274
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=9.9e-36 Score=360.46 Aligned_cols=259 Identities=23% Similarity=0.347 Sum_probs=202.9
Q ss_pred HhcCCcCceeccCCceEEEEEEECC---CCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHR---PHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVM 773 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~ 773 (1009)
.++|+..+.||+|+||.||+|.+.. .+..||||++... ......+.+.+|+.++++++||||+++++++.+ +..+
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~ 466 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVW 466 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST-TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceE
Confidence 3568889999999999999999864 3578999998543 233445677799999999999999999999854 5689
Q ss_pred EEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 774 MVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 774 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
+||||+++|+|.++++... ..+++..++.++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 467 lv~E~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~ 540 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 540 (656)
T ss_dssp EEEECCTTCBHHHHHHHTT---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred EEEEcCCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCee
Confidence 9999999999999997543 2378999999999999999999999 999999999999999999999999999987
Q ss_pred cccCCC-ceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhccccccc
Q 037197 854 MLHKNE-TVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEA 931 (1009)
Q Consensus 854 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1009)
...... ......+++.|+|||++....++.++||||||+++|||++ |..||.... ..+.+.. +..+..
T Consensus 541 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~-----~~~~~~~-i~~~~~---- 610 (656)
T 2j0j_A 541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK-----NNDVIGR-IENGER---- 610 (656)
T ss_dssp CCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHH-HHHTCC----
T ss_pred cCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC-----HHHHHHH-HHcCCC----
Confidence 643332 2233456789999999988889999999999999999997 999997421 1222222 222211
Q ss_pred cCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCC
Q 037197 932 LDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPR 981 (1009)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~ 981 (1009)
..+...++ ..+.+++.+||+.||++||++.|+++.|+++.++
T Consensus 611 --~~~~~~~~------~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 611 --LPMPPNCP------PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp --CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CCCCcccc------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 11111111 2456788999999999999999999999988644
No 275
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.6e-35 Score=326.58 Aligned_cols=251 Identities=22% Similarity=0.341 Sum_probs=195.2
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccC--CCceeeEEeEEEcCCeEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLR--HRNIVRLLGYLHNETNVMM 774 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--Hpniv~l~~~~~~~~~~~l 774 (1009)
.++|+..+.||+|+||.||+|.+.. ++.||||++..........+.+.+|++++++++ ||||+++++++.++...++
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCC-CcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 3568999999999999999999875 889999999766555566677789999999997 5999999999999999999
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceec
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMM 854 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~ 854 (1009)
||| +.+++|.+++.... .+++.+++.++.|+++||+|||+. +|+||||||+||++++ +.+||+|||+++..
T Consensus 106 v~e-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~ 176 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQM 176 (313)
T ss_dssp EEC-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC-
T ss_pred EEe-cCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccc
Confidence 999 56899999997543 278889999999999999999999 9999999999999964 89999999999876
Q ss_pred ccCCC--ceeeecccCcccCCcccCC-----------CCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHH
Q 037197 855 LHKNE--TVSMVAGSYGYIAPEYGYT-----------LKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSM 921 (1009)
Q Consensus 855 ~~~~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~ 921 (1009)
..... ......|++.|+|||.... ..++.++||||||+++|||++|+.||..... ....+...
T Consensus 177 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~----~~~~~~~~ 252 (313)
T 3cek_A 177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN----QISKLHAI 252 (313)
T ss_dssp -------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS----HHHHHHHH
T ss_pred cCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH----HHHHHHHH
Confidence 43322 2234568999999998764 4688899999999999999999999974321 12222222
Q ss_pred HhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 922 IKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
..... ...+..... ..+.+++.+|++.||++||++.|+++
T Consensus 253 ~~~~~------~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 253 IDPNH------EIEFPDIPE------KDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp HCTTS------CCCCCCCSC------HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred Hhccc------ccCCcccch------HHHHHHHHHHccCCcccCcCHHHHhc
Confidence 21111 111111111 24567889999999999999999986
No 276
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.5e-35 Score=329.69 Aligned_cols=253 Identities=22% Similarity=0.295 Sum_probs=172.0
Q ss_pred HHhcCCcC-ceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHH-HHHhccCCCceeeEEeEEEc----C
Q 037197 696 ILACVKES-NIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREV-SLLGRLRHRNIVRLLGYLHN----E 769 (1009)
Q Consensus 696 ~~~~~~~~-~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~-~~l~~l~Hpniv~l~~~~~~----~ 769 (1009)
+.++|... ++||+|+||.||+|.+..+++.||||++... ....+|+ ..++.++||||+++++++.. +
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 98 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-------PKARQEVDHHWQASGGPHIVCILDVYENMHHGK 98 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-------HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCC
Confidence 45678874 4699999999999999999999999998542 1222333 34666799999999999876 4
Q ss_pred CeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCC---CCcEEEc
Q 037197 770 TNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDA---NLEARIA 846 (1009)
Q Consensus 770 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~ 846 (1009)
...++||||+++|+|.+++..... ..+++.+++.++.|+++||+|||+. +|+||||||+||+++. ++.+||+
T Consensus 99 ~~~~lv~e~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~ 173 (336)
T 3fhr_A 99 RCLLIIMECMEGGELFSRIQERGD--QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLT 173 (336)
T ss_dssp EEEEEEEECCTTEEHHHHHHTC-C--CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred ceEEEEEeccCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEe
Confidence 558999999999999999976532 3488999999999999999999999 9999999999999976 4559999
Q ss_pred ccccceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcc
Q 037197 847 DFGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNK 926 (1009)
Q Consensus 847 DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 926 (1009)
|||+++.... .......+|+.|+|||++....++.++||||||+++|+|++|+.||...... .........+....
T Consensus 174 Dfg~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~ 249 (336)
T 3fhr_A 174 DFGFAKETTQ--NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQ--AISPGMKRRIRLGQ 249 (336)
T ss_dssp CCTTCEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------
T ss_pred ccccceeccc--cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccch--hhhhhHHHhhhccc
Confidence 9999986532 2233456899999999998888999999999999999999999999643221 11111111111100
Q ss_pred ccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 927 AQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.....+.. ... ...+.+++.+|++.||++|||+.|+++
T Consensus 250 --~~~~~~~~----~~~---~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 250 --YGFPNPEW----SEV---SEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp ---CCCTTTS----TTC---CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred --cccCchhh----ccC---CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00000100 111 124567889999999999999999997
No 277
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=3.8e-35 Score=326.07 Aligned_cols=254 Identities=25% Similarity=0.373 Sum_probs=180.2
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
.++|+..+.||+|+||.||+|.+..+++.||||++............+.++..+++.++||||+++++++.+++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 35688889999999999999999988999999999765433333333335556788889999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHh-cCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHH-DCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
||+ ++.+..+..... ..+++..++.++.|+++||+|||+ . +|+||||||+||+++.++.+||+|||++....
T Consensus 104 e~~-~~~~~~l~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQ---GPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp CCC-SEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred ecc-CCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 999 555555553221 237889999999999999999998 5 89999999999999999999999999997654
Q ss_pred cCCCceeeecccCcccCCcccC-----CCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccc
Q 037197 856 HKNETVSMVAGSYGYIAPEYGY-----TLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDE 930 (1009)
Q Consensus 856 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1009)
.. .......+++.|+|||+.. ...++.++||||||+++|||++|+.||.... .....+........
T Consensus 177 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~~~~~~~~~~~~~~---- 247 (318)
T 2dyl_A 177 DD-KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK----TDFEVLTKVLQEEP---- 247 (318)
T ss_dssp -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCC----SHHHHHHHHHHSCC----
T ss_pred CC-ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCC----ccHHHHHHHhccCC----
Confidence 32 2233456899999999974 5568899999999999999999999997422 22222222222211
Q ss_pred ccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 931 ALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
+.+... .... ..+..++.+|++.||++||++.|+++
T Consensus 248 ---~~~~~~-~~~~---~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 248 ---PLLPGH-MGFS---GDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp ---CCCCSS-SCCC---HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ---CCCCcc-CCCC---HHHHHHHHHHccCChhHCcCHHHHhh
Confidence 111100 0011 24567889999999999999999876
No 278
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=4.6e-36 Score=333.73 Aligned_cols=275 Identities=18% Similarity=0.250 Sum_probs=196.6
Q ss_pred cChHHhHHHHHHHHhhc-cCCCCCCCCCCCCCccccCCcCCceeeeEEeCC---------CCceeEEecccccccccccc
Q 037197 15 SNADDELSTLLSIKAGL-IDPLNMLEDWKMPSNAAENGLLHCNWTGVWCNS---------RGFVEKLDLSNMSLNGSVSE 84 (1009)
Q Consensus 15 ~~~~~~~~~ll~~k~~~-~d~~~~l~~W~~~~~~~~~~~~~C~w~gv~C~~---------~~~v~~l~l~~~~l~~~~~~ 84 (1009)
++..+|++||++||+++ .||.+.+++|.... ..+.++|.|.||.|+. ..+|+.|+|+++.++ .+|+
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~---~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~ 98 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQAN---SNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPD 98 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHT---TTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCS
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccc---cccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcCh
Confidence 44578999999999999 58888889994211 1245789999999952 245555555555554 3444
Q ss_pred ccccCCCCCeEecccCcccccCCccccccCccCcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCC
Q 037197 85 NIRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSL 164 (1009)
Q Consensus 85 ~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L 164 (1009)
.+..+++|++|+|++|.++ .+|..++++++|++|+|++ |+++ .+|..++++++|
T Consensus 99 ~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~------------------------n~l~-~lp~~l~~l~~L 152 (328)
T 4fcg_A 99 QAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLAR------------------------NPLR-ALPASIASLNRL 152 (328)
T ss_dssp CGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEES------------------------CCCC-CCCGGGGGCTTC
T ss_pred hhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCC------------------------Cccc-cCcHHHhcCcCC
Confidence 4444555555555555544 4444444455555555544 4444 444445555555
Q ss_pred CeeeccCCccCCcCCccc---------cCccccceeeeccccccccCCccCCCCcchhhhhcccccccccCCccccCCCC
Q 037197 165 ESLDFRGSFFEGSVPTSF---------RNLQKLKFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTN 235 (1009)
Q Consensus 165 ~~L~L~~n~~~~~~p~~~---------~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 235 (1009)
++|+|++|.+.+.+|..+ .++++|++|+|++|+++ .+|..++.+++|++|+|++|++++ +|..++++++
T Consensus 153 ~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~ 230 (328)
T 4fcg_A 153 RELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPK 230 (328)
T ss_dssp CEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTT
T ss_pred CEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCC
Confidence 555555544444444443 44888888888888888 778788888888888888888884 6667888888
Q ss_pred ccEEEeccCccccccCcccCCCCCCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCCCeEeccc
Q 037197 236 LRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMC 315 (1009)
Q Consensus 236 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~ 315 (1009)
|++|+|++|++.+.+|..++.+++|++|+|++|++.+.+|..+..+++|++|+|++|++.+.+|..+..+++|+.+++..
T Consensus 231 L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~ 310 (328)
T 4fcg_A 231 LEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPP 310 (328)
T ss_dssp CCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCG
T ss_pred CCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCH
Confidence 88888888888888888888888888888888888888888888888899999999888888888899999999988888
Q ss_pred cccCCC
Q 037197 316 NQLTGL 321 (1009)
Q Consensus 316 N~l~~~ 321 (1009)
+.+...
T Consensus 311 ~~~~~l 316 (328)
T 4fcg_A 311 HLQAQL 316 (328)
T ss_dssp GGSCC-
T ss_pred HHHHHH
Confidence 776543
No 279
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.2e-35 Score=329.33 Aligned_cols=257 Identities=23% Similarity=0.331 Sum_probs=176.8
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHH-HHhccCCCceeeEEeEEEcCCeEEEEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVS-LLGRLRHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
++|+..+.||+|+||.||+|.+..+++.||||++..... .....++..|+. +++.++||||+++++++.+.+..++||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD-EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC-HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC-chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 467888999999999999999999999999999965432 333445556665 777889999999999999999999999
Q ss_pred eccCCCChhhhhcCCc-cccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecc
Q 037197 777 DYMPNDSLGEALHGKE-AGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMML 855 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~ 855 (1009)
||+++ +|.+++.... .....+++..+..++.|+++||+|||+. .+|+||||||+||+++.++.+||+|||+++...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 99975 7887775311 1123378899999999999999999985 289999999999999999999999999998764
Q ss_pred cCCCceeeecccCcccCCccc----CCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccc
Q 037197 856 HKNETVSMVAGSYGYIAPEYG----YTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEA 931 (1009)
Q Consensus 856 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1009)
... ......||+.|+|||+. ....++.++||||||+++|||++|+.||...... ...+.. ....
T Consensus 178 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~-------~~~~ 245 (327)
T 3aln_A 178 DSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV----FDQLTQ-------VVKG 245 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------CC-------CCCS
T ss_pred ccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH----HHHHHH-------HhcC
Confidence 322 22334689999999997 4567899999999999999999999999742211 011000 0000
Q ss_pred cCcccccc-CchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 932 LDPSIAGQ-CKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 932 ~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
..+.+... .... ...+.+++.+|++.||++||++.|+++
T Consensus 246 ~~~~~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 246 DPPQLSNSEEREF---SPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCCCCCCSSCCC---CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCCcccccC---CHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 11111110 0111 124667889999999999999999976
No 280
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.1e-35 Score=330.39 Aligned_cols=244 Identities=20% Similarity=0.364 Sum_probs=197.3
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCCh----hhHHHHHHHHHHHhccC--CCceeeEEeEEEcC
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDI----ESGDDLFREVSLLGRLR--HRNIVRLLGYLHNE 769 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~--Hpniv~l~~~~~~~ 769 (1009)
+.++|+..+.||+|+||.||+|.+..+++.||||++....... .....+.+|++++++++ ||||+++++++.++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 3567899999999999999999999999999999996543221 12234558999999996 59999999999999
Q ss_pred CeEEEEEeccCC-CChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeC-CCCcEEEcc
Q 037197 770 TNVMMVYDYMPN-DSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLD-ANLEARIAD 847 (1009)
Q Consensus 770 ~~~~lV~E~~~~-gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~-~~~~~kl~D 847 (1009)
+..++||||+.+ ++|.+++.... .+++..++.++.|+++||+|||+. +|+||||||+||+++ .++.+||+|
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~D 193 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERG----ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLID 193 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECC
T ss_pred CcEEEEEEcCCCCccHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEee
Confidence 999999999986 89999987533 278899999999999999999999 999999999999999 788999999
Q ss_pred cccceecccCCCceeeecccCcccCCcccCCCCC-CcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcc
Q 037197 848 FGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKV-DEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNK 926 (1009)
Q Consensus 848 fGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 926 (1009)
||+++..... ......||+.|+|||++....+ +.++||||||+++|||++|+.||... .. ... ..
T Consensus 194 fg~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~-------~~----~~~-~~ 259 (320)
T 3a99_A 194 FGSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-------EE----IIR-GQ 259 (320)
T ss_dssp CTTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH-------HH----HHH-CC
T ss_pred Cccccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh-------hh----hhc-cc
Confidence 9999876432 2334568999999998876665 68899999999999999999999631 01 111 11
Q ss_pred ccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 927 AQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
..... ... .++.+++.+|++.||++||++.|+++
T Consensus 260 ---~~~~~----~~~------~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 260 ---VFFRQ----RVS------SECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ---CCCSS----CCC------HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---ccccc----cCC------HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01111 111 24567889999999999999999987
No 281
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=328.46 Aligned_cols=246 Identities=22% Similarity=0.362 Sum_probs=190.0
Q ss_pred HHHHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCCh----hhHHHHHHHHHHHhcc----CCCceeeEEeE
Q 037197 694 SEILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDI----ESGDDLFREVSLLGRL----RHRNIVRLLGY 765 (1009)
Q Consensus 694 ~~~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l----~Hpniv~l~~~ 765 (1009)
+.+.++|+..+.||+|+||.||+|.+..+++.||||++....... .....+.+|+++++++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 445678999999999999999999999889999999996543221 1223344799999988 89999999999
Q ss_pred EEcCCeEEEEEec-cCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeC-CCCcE
Q 037197 766 LHNETNVMMVYDY-MPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLD-ANLEA 843 (1009)
Q Consensus 766 ~~~~~~~~lV~E~-~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~-~~~~~ 843 (1009)
+.+.+..++|||| +.+++|.+++.... .+++..++.++.|+++||+|||+. +|+||||||+||+++ .++.+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKG----PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeE
Confidence 9999999999999 78999999997543 278999999999999999999999 999999999999999 88999
Q ss_pred EEcccccceecccCCCceeeecccCcccCCcccCCCCC-CcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHH
Q 037197 844 RIADFGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKV-DEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMI 922 (1009)
Q Consensus 844 kl~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~ 922 (1009)
||+|||++...... ......|++.|+|||+..+..+ +.++||||||+++|||++|+.||... .. ..
T Consensus 180 kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-------~~----~~ 246 (312)
T 2iwi_A 180 KLIDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD-------QE----IL 246 (312)
T ss_dssp EECCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH-------HH----HH
T ss_pred EEEEcchhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh-------HH----Hh
Confidence 99999999876432 2344568999999998776665 45899999999999999999999631 11 11
Q ss_pred hhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 923 KSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.... .+..... ..+.+++.+|++.||++||++.|+++
T Consensus 247 ~~~~--------~~~~~~~------~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 247 EAEL--------HFPAHVS------PDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp HTCC--------CCCTTSC------HHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred hhcc--------CCcccCC------HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1110 1111111 24567889999999999999999987
No 282
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.3e-34 Score=327.16 Aligned_cols=263 Identities=17% Similarity=0.228 Sum_probs=197.5
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCC-eEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCc------eeeEEeEEEcC
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPH-MVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRN------IVRLLGYLHNE 769 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpn------iv~l~~~~~~~ 769 (1009)
.++|+..+.||+|+||.||+|.+..++ +.||+|++... ....+.+.+|++++++++|++ ++.+++++...
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 94 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH 94 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence 467899999999999999999998766 79999999532 344556668999999997665 99999999999
Q ss_pred CeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEe------------
Q 037197 770 TNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILL------------ 837 (1009)
Q Consensus 770 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll------------ 837 (1009)
+..++||||+ ++++.+++..... ..+++.+++.++.||++||+|||+. +|+||||||+||++
T Consensus 95 ~~~~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 95 GHMCIAFELL-GKNTFEFLKENNF--QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC
T ss_pred CeEEEEEecc-CCChHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccc
Confidence 9999999999 6667777654332 2378899999999999999999998 99999999999999
Q ss_pred -------CCCCcEEEcccccceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCC
Q 037197 838 -------DANLEARIADFGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGG 910 (1009)
Q Consensus 838 -------~~~~~~kl~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~ 910 (1009)
+.++.+||+|||+++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~- 244 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHE---HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN- 244 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTS---CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-
T ss_pred ccccccccCCCcEEEeecCccccccc---cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH-
Confidence 5678999999999986432 23345789999999999988999999999999999999999999974211
Q ss_pred CccHHHHHHHHHhh--------ccccccccCc-------------------cccccCchHHHHHHHHHHHHHHhccCCCC
Q 037197 911 SKDIVEWVLSMIKS--------NKAQDEALDP-------------------SIAGQCKHVQEEMLLVLRIAVLCTAKLPK 963 (1009)
Q Consensus 911 ~~~~~~~~~~~~~~--------~~~~~~~~~~-------------------~~~~~~~~~~~~~~~l~~l~~~cl~~dp~ 963 (1009)
.+....+...... .......... .+............++.+++.+|++.||+
T Consensus 245 -~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 323 (355)
T 2eu9_A 245 -REHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA 323 (355)
T ss_dssp -HHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred -HHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChh
Confidence 1111222111100 0000000000 00000000112234677899999999999
Q ss_pred CCCCHHHHHH
Q 037197 964 GRPTMRDVIT 973 (1009)
Q Consensus 964 ~RPs~~evl~ 973 (1009)
+|||+.|+++
T Consensus 324 ~Rpt~~e~l~ 333 (355)
T 2eu9_A 324 QRITLAEALL 333 (355)
T ss_dssp TSCCHHHHTT
T ss_pred hCcCHHHHhc
Confidence 9999999973
No 283
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=5.2e-35 Score=332.83 Aligned_cols=271 Identities=21% Similarity=0.286 Sum_probs=200.1
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccC-----------CCceeeEEeEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLR-----------HRNIVRLLGYL 766 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----------Hpniv~l~~~~ 766 (1009)
++|+..+.||+|+||.||+|++..+++.||||++... ......+.+|++++++++ ||||+++++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC---ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 5688899999999999999999999999999998532 344556678999988886 89999999998
Q ss_pred EcCC----eEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeC----
Q 037197 767 HNET----NVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLD---- 838 (1009)
Q Consensus 767 ~~~~----~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~---- 838 (1009)
...+ ..++||||+ +++|.+++...... .+++..+..++.||+.||+|||+++ +|+||||||+||+++
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~ 170 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALIKKYEHR--GIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDS 170 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHHHHTTTS--CCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEET
T ss_pred hccCCCCceEEEEEecC-CCCHHHHHHHhhcc--CCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCC
Confidence 7654 789999999 99999999764322 2788899999999999999999853 899999999999994
Q ss_pred --CCCcEEEcccccceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCC-ccHH
Q 037197 839 --ANLEARIADFGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGS-KDIV 915 (1009)
Q Consensus 839 --~~~~~kl~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~-~~~~ 915 (1009)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....
T Consensus 171 ~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 171 PENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred CcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 4458999999999876432 234578999999999988889999999999999999999999997533211 0111
Q ss_pred HHHHHHHhhcccc-----------ccccCc-----------------cccccCchHHHHHHHHHHHHHHhccCCCCCCCC
Q 037197 916 EWVLSMIKSNKAQ-----------DEALDP-----------------SIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPT 967 (1009)
Q Consensus 916 ~~~~~~~~~~~~~-----------~~~~~~-----------------~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs 967 (1009)
..+.......... ...+.. .+............++.+++.+|++.||++|||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 1111111100000 000000 000011111234456788999999999999999
Q ss_pred HHHHHH--HHhhcC
Q 037197 968 MRDVIT--MLGEAK 979 (1009)
Q Consensus 968 ~~evl~--~L~~~~ 979 (1009)
+.|+++ .+.+..
T Consensus 328 ~~ell~hp~f~~~~ 341 (373)
T 1q8y_A 328 AGGLVNHPWLKDTL 341 (373)
T ss_dssp HHHHHTCGGGTTCT
T ss_pred HHHHhhChhhhccc
Confidence 999987 455443
No 284
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=4.6e-35 Score=347.04 Aligned_cols=277 Identities=21% Similarity=0.253 Sum_probs=203.9
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEc------C
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHN------E 769 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~------~ 769 (1009)
..++|+..+.||+|+||.||+|.+..+++.||||++... ......+.+.+|++++++++||||+++++++.. +
T Consensus 12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 347799999999999999999999988999999998653 334556677799999999999999999998765 6
Q ss_pred CeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCc---EEEc
Q 037197 770 TNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLE---ARIA 846 (1009)
Q Consensus 770 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~---~kl~ 846 (1009)
+..++||||+++|+|.+++...... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~-~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENC-CGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCT-TCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEc
Confidence 7789999999999999999865432 2378888999999999999999998 9999999999999997765 9999
Q ss_pred ccccceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhc-
Q 037197 847 DFGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSN- 925 (1009)
Q Consensus 847 DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~- 925 (1009)
|||.+...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||.... ....|........
T Consensus 167 DFG~a~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~~~~~~~i~~~~~ 241 (676)
T 3qa8_A 167 DLGYAKELDQG-ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW----QPVQWHGKVREKSN 241 (676)
T ss_dssp SCCCCCBTTSC-CCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC----HHHHSSTTCC----
T ss_pred ccccccccccc-cccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc----chhhhhhhhhcccc
Confidence 99999876433 23345678999999999998999999999999999999999999996421 1111110000000
Q ss_pred --cccccccC------ccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHH-----HHHHHhhcCCCc
Q 037197 926 --KAQDEALD------PSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRD-----VITMLGEAKPRR 982 (1009)
Q Consensus 926 --~~~~~~~~------~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~e-----vl~~L~~~~~~~ 982 (1009)
........ ................+.+++.+|++.||++|||+.| +.+.++++...+
T Consensus 242 ~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k 311 (676)
T 3qa8_A 242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK 311 (676)
T ss_dssp --CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred hhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence 00000000 0000000001112345678889999999999999988 667777666544
No 285
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.2e-33 Score=318.02 Aligned_cols=308 Identities=23% Similarity=0.329 Sum_probs=204.4
Q ss_pred cccCCCCccEEEeccCccccccCcccCCCCCCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCC
Q 037197 229 EFGNLTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNL 308 (1009)
Q Consensus 229 ~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 308 (1009)
.+..+++|++|++++|.+.. ++ .+..+++|++|++++|.+++. +. +..+++|++|++++|.+++ ++ .+..+++|
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L 112 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNL 112 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTC
T ss_pred cchhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcC
Confidence 35677888888888888874 33 377788888888888888753 33 7778888888888888774 33 57777788
Q ss_pred CeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccCCcCccCCCCCceeecccc
Q 037197 309 QLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNN 388 (1009)
Q Consensus 309 ~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N 388 (1009)
++|++++|++++..+ +..+++|+.|++++|......+. +..+++|+.|++++|.+.+..+ +.
T Consensus 113 ~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~------------- 174 (347)
T 4fmz_A 113 RELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IA------------- 174 (347)
T ss_dssp SEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GG-------------
T ss_pred CEEECcCCcccCchh--hccCCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hc-------------
Confidence 888888888776533 67777777777777754443332 5555566666666665553322 44
Q ss_pred cccccCCcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCC
Q 037197 389 SFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPS 468 (1009)
Q Consensus 389 ~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 468 (1009)
.+++|++|++++|.+.+..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..+
T Consensus 175 -----------~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~- 238 (347)
T 4fmz_A 175 -----------NLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP- 238 (347)
T ss_dssp -----------GCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-
T ss_pred -----------cCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc-
Confidence 44444555555554443222 4455555555555555553322 4555556666666665555433
Q ss_pred cccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCccccccccc
Q 037197 469 SILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTL 548 (1009)
Q Consensus 469 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 548 (1009)
+..+++|++|++++|.+++. ..+..+++|+.|++++|++++. ..+..+++|+.|+|++|++++..|..++.+++|
T Consensus 239 -~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 313 (347)
T 4fmz_A 239 -LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNL 313 (347)
T ss_dssp -GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTC
T ss_pred -hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccC
Confidence 55666666666666666543 3567777888888888888754 357778888888888888887777888888888
Q ss_pred ceecCCccccccccCcCcCCCCCCcEEecCCCccc
Q 037197 549 AILDMSNNSLFGRIPENFGASPALEMLNLSYNKLE 583 (1009)
Q Consensus 549 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 583 (1009)
+.|+|++|++++..| +..++.|++||+++|+++
T Consensus 314 ~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 314 TTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp SEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 888888888887766 777888888888888775
No 286
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.3e-34 Score=335.08 Aligned_cols=252 Identities=24% Similarity=0.325 Sum_probs=182.7
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCCeEEEEE
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
+.|...+.||+|+||+||.+... +|+.||||++... ..+.+.+|+++++++ +||||+++++++.++...++||
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~-~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~ 88 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSF-QGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIAL 88 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEES-SSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred heeeccCeEeeCCCeEEEEEEEE-CCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEE
Confidence 34556788999999999876444 4899999998532 234567999999886 8999999999999999999999
Q ss_pred eccCCCChhhhhcCCcccccc---ccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCC-------------
Q 037197 777 DYMPNDSLGEALHGKEAGKLL---VDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDAN------------- 840 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~---~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~------------- 840 (1009)
||++ |+|.+++......... .++..++.++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 89 E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~ 164 (434)
T 2rio_A 89 ELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAEN 164 (434)
T ss_dssp CCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCS
T ss_pred ecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCc
Confidence 9995 6999999765432211 13334577999999999999999 99999999999999754
Q ss_pred CcEEEcccccceecccCCC----ceeeecccCcccCCcccCC-------CCCCcccchHhHHHHHHHHHh-CCCCCCCCC
Q 037197 841 LEARIADFGLARMMLHKNE----TVSMVAGSYGYIAPEYGYT-------LKVDEKSDIYSFGVVLLELLT-GKMPLDPAF 908 (1009)
Q Consensus 841 ~~~kl~DfGls~~~~~~~~----~~~~~~gt~~y~aPE~~~~-------~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~ 908 (1009)
+.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||....
T Consensus 165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 244 (434)
T 2rio_A 165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244 (434)
T ss_dssp CEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred eEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence 4899999999987654332 1234579999999998765 678999999999999999999 999997432
Q ss_pred CCCccHHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 909 GGSKDIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
.. .. .......... .... ........++.+++.+|++.||++||++.|+++
T Consensus 245 ~~---~~----~i~~~~~~~~-----~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 245 SR---ES----NIIRGIFSLD-----EMKC--LHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp TH---HH----HHHHTCCCCC-----CCTT--CCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hh---HH----HHhcCCCCcc-----cccc--cccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 11 11 1111111100 1100 011122345678899999999999999999985
No 287
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=3.4e-34 Score=312.27 Aligned_cols=235 Identities=14% Similarity=0.085 Sum_probs=184.4
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCC-hhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEE
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDND-IESGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMM 774 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 774 (1009)
+.++|+..+.||+|+||.||+|.+..+++.||||++...... ....+.+.+|++++++++||||+++++++.+++..|+
T Consensus 29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 108 (286)
T 3uqc_A 29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLV 108 (286)
T ss_dssp TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEE
Confidence 346789999999999999999999999999999999765433 3445677799999999999999999999999999999
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceec
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMM 854 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~ 854 (1009)
||||+++++|.++++.. ....++.+|+.|+++||+|||++ +|+||||||+||+++.++.+||+++|
T Consensus 109 v~e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~----- 174 (286)
T 3uqc_A 109 VAEWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA----- 174 (286)
T ss_dssp EEECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-----
T ss_pred EEEecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-----
Confidence 99999999999999543 23446778999999999999999 99999999999999999999998543
Q ss_pred ccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCc
Q 037197 855 LHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDP 934 (1009)
Q Consensus 855 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1009)
|++ .++.++|||||||++|||++|+.||........ +. ........
T Consensus 175 ---------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-~~-----------~~~~~~~~ 220 (286)
T 3uqc_A 175 ---------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSG-LA-----------PAERDTAG 220 (286)
T ss_dssp ---------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC-SE-----------ECCBCTTS
T ss_pred ---------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchh-hH-----------HHHHHhcc
Confidence 333 368899999999999999999999974322100 00 00000000
Q ss_pred cc---cccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHhhcCCCc
Q 037197 935 SI---AGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVITMLGEAKPRR 982 (1009)
Q Consensus 935 ~~---~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 982 (1009)
.. ....... ...+.+++.+||+.||++| |+.|+++.|+++....
T Consensus 221 ~~~~~~~~~~~~---~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 221 QPIEPADIDRDI---PFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp CBCCHHHHCTTS---CHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred CCCChhhcccCC---CHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 00 0000111 1246678899999999999 9999999999987543
No 288
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.5e-33 Score=317.36 Aligned_cols=308 Identities=25% Similarity=0.366 Sum_probs=231.6
Q ss_pred cCCCCcchhhhhcccccccccCCccccCCCCccEEEeccCccccccCcccCCCCCCcEEEcccCCcCCCCCccccccccc
Q 037197 205 ELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKIPPELGSITSL 284 (1009)
Q Consensus 205 ~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 284 (1009)
.+..+++|++|++++|.++. ++ .+..+++|++|++++|.+++..+ +..+++|++|++++|.+++ + +.+..+++|
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L 112 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-I-SALQNLTNL 112 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTC
T ss_pred cchhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-c-hHHcCCCcC
Confidence 35678999999999999984 44 48999999999999999986544 9999999999999999996 3 468999999
Q ss_pred ccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCc
Q 037197 285 AFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSN 364 (1009)
Q Consensus 285 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N 364 (1009)
++|++++|.+++..+ +..+++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|
T Consensus 113 ~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n 187 (347)
T 4fmz_A 113 RELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYN 187 (347)
T ss_dssp SEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTS
T ss_pred CEEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCC
Confidence 999999999995443 8899999999999997665544 48999999999999999987655 788999999999999
Q ss_pred cccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCc
Q 037197 365 LLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPD 444 (1009)
Q Consensus 365 ~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 444 (1009)
.+.+..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|++++..+ +..+++|++|++++|+++
T Consensus 188 ~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~----- 256 (347)
T 4fmz_A 188 QIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQIS----- 256 (347)
T ss_dssp CCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-----
T ss_pred ccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccC-----
Confidence 9875433 6666777777777777765433 5566666666666666654332 555555555555555554
Q ss_pred CCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccc
Q 037197 445 DISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKL 524 (1009)
Q Consensus 445 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L 524 (1009)
++ ..+..+++|+.|++++|++++. ..+..+++|+.|+|++|++++..|..+..+++|
T Consensus 257 -------------------~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 313 (347)
T 4fmz_A 257 -------------------DI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNL 313 (347)
T ss_dssp -------------------CC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTC
T ss_pred -------------------CC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccC
Confidence 32 2344455555555555555543 346677788888888888877777778888888
Q ss_pred eeeeecCcccccCCCcccccccccceecCCccccc
Q 037197 525 VSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLF 559 (1009)
Q Consensus 525 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 559 (1009)
+.|+|++|++++..| +..+++|+.||+++|+|+
T Consensus 314 ~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 314 TTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp SEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 888888888876555 777888888888888775
No 289
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.1e-34 Score=330.78 Aligned_cols=246 Identities=24% Similarity=0.318 Sum_probs=180.3
Q ss_pred cCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCCeEEEEEe
Q 037197 699 CVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRL-RHRNIVRLLGYLHNETNVMMVYD 777 (1009)
Q Consensus 699 ~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~lV~E 777 (1009)
.|+..++||+|+||+||.... .+++.||||++.... ...+.+|+++++++ +||||+++++++.+....++|||
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~-~~~~~vAvK~~~~~~-----~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGM-FDNRDVAVKRILPEC-----FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEE-SSSSEEEEEEECTTT-----EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEecCCeeecCcCEEEEEEEE-eCCeEEEEEEECHHH-----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 577888999999999664333 347899999985432 12345899999999 79999999999999999999999
Q ss_pred ccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCC-----CcEEEcccccce
Q 037197 778 YMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDAN-----LEARIADFGLAR 852 (1009)
Q Consensus 778 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~-----~~~kl~DfGls~ 852 (1009)
|++ |+|.+++...... ..+..++.++.||++||+|||+. +|+||||||+||+++.+ ..+||+|||+++
T Consensus 99 ~~~-g~L~~~l~~~~~~---~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~ 171 (432)
T 3p23_A 99 LCA-ATLQEYVEQKDFA---HLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171 (432)
T ss_dssp CCS-EEHHHHHHSSSCC---CCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEE
T ss_pred CCC-CCHHHHHHhcCCC---ccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEeccccee
Confidence 996 6999999765432 33445567999999999999999 99999999999999532 358899999998
Q ss_pred ecccCC---CceeeecccCcccCCcccC---CCCCCcccchHhHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHHHHhhc
Q 037197 853 MMLHKN---ETVSMVAGSYGYIAPEYGY---TLKVDEKSDIYSFGVVLLELLT-GKMPLDPAFGGSKDIVEWVLSMIKSN 925 (1009)
Q Consensus 853 ~~~~~~---~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~SlGvvl~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~ 925 (1009)
...... .......||+.|+|||++. ...++.++|||||||++|||++ |..||...... .... ....
T Consensus 172 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~------~~~~-~~~~ 244 (432)
T 3p23_A 172 KLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR------QANI-LLGA 244 (432)
T ss_dssp CC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH------HHHH-HTTC
T ss_pred eccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH------HHHH-Hhcc
Confidence 764332 2234467999999999987 4567889999999999999999 99998632111 1111 1111
Q ss_pred cccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 926 KAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
. ......+ . ......+.+++.+|++.||++||++.|+++
T Consensus 245 ~-~~~~~~~-----~---~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 245 C-SLDCLHP-----E---KHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp C-CCTTSCT-----T---CHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred C-CccccCc-----c---ccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 1 0111110 0 112233567899999999999999999983
No 290
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.2e-34 Score=347.50 Aligned_cols=242 Identities=21% Similarity=0.244 Sum_probs=193.5
Q ss_pred HhcCCcCceeccCCceEEEEEEECC-CCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEEcCCe----
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHR-PHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLHNETN---- 771 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~---- 771 (1009)
.++|+..+.||+|+||.||+|.+.. +++.||||++... ........+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS-GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc-CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 3678999999999999999999975 6899999998653 234445667799999999999999999999987655
Q ss_pred -EEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEccccc
Q 037197 772 -VMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGL 850 (1009)
Q Consensus 772 -~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGl 850 (1009)
.|+||||+++++|.+++.. .+++.+++.|+.||++||+|||++ +|+||||||+||+++.+ .+||+|||+
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred eeEEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEeccc
Confidence 7999999999999988754 288999999999999999999999 99999999999999986 999999999
Q ss_pred ceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcccccc
Q 037197 851 ARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDE 930 (1009)
Q Consensus 851 s~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1009)
++..... ....||+.|+|||++.+. .+.++|||||||++|+|++|..||...... .
T Consensus 228 a~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~-------------------~ 283 (681)
T 2pzi_A 228 VSRINSF----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVD-------------------G 283 (681)
T ss_dssp CEETTCC----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECS-------------------S
T ss_pred chhcccC----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccc-------------------c
Confidence 9876432 345699999999987654 488999999999999999999887632111 0
Q ss_pred ccCccccccCchHHHHHHHHHHHHHHhccCCCCCCC-CHHHHHHHHhhcC
Q 037197 931 ALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRP-TMRDVITMLGEAK 979 (1009)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RP-s~~evl~~L~~~~ 979 (1009)
. . ...........+.+++.+|++.||++|| ++.++.+.|..+.
T Consensus 284 ~-~-----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 284 L-P-----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp C-C-----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred c-c-----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 0 0 0001111223567899999999999999 5666777776654
No 291
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=5.2e-33 Score=305.76 Aligned_cols=233 Identities=23% Similarity=0.282 Sum_probs=178.3
Q ss_pred HHhcCCcC-ceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHH-hccCCCceeeEEeEEEc----C
Q 037197 696 ILACVKES-NIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLL-GRLRHRNIVRLLGYLHN----E 769 (1009)
Q Consensus 696 ~~~~~~~~-~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l-~~l~Hpniv~l~~~~~~----~ 769 (1009)
+.+.|... +.||+|+||.||+|.+..+++.||+|++.. .....+|++++ +..+||||+++++++.. .
T Consensus 15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 87 (299)
T 3m2w_A 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLYAGR 87 (299)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCC
Confidence 45567666 789999999999999999999999999843 23566888887 55699999999999876 6
Q ss_pred CeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCC---CCcEEEc
Q 037197 770 TNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDA---NLEARIA 846 (1009)
Q Consensus 770 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~ 846 (1009)
...++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~ 162 (299)
T 3m2w_A 88 KCLLIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 162 (299)
T ss_dssp EEEEEEECCCCSCBHHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred ceEEEEEeecCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEe
Confidence 778999999999999999976432 2378999999999999999999999 9999999999999998 7889999
Q ss_pred ccccceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCCCCccHHHHHHHHHhhcc
Q 037197 847 DFGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNK 926 (1009)
Q Consensus 847 DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 926 (1009)
|||++.... +..++.++|||||||++|||++|+.||....... . . ..
T Consensus 163 Dfg~a~~~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-----~-----~-~~ 209 (299)
T 3m2w_A 163 DFGFAKETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-----I-----S-PG 209 (299)
T ss_dssp CCTTCEECT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------CC
T ss_pred ccccccccc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh-----h-----h-HH
Confidence 999986542 2346789999999999999999999996422110 0 0 00
Q ss_pred ccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 037197 927 AQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVIT 973 (1009)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 973 (1009)
......................++.+++.+|++.||++|||+.|+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 210 MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp SCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00000000000000000011235678899999999999999999986
No 292
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.6e-32 Score=306.68 Aligned_cols=288 Identities=22% Similarity=0.304 Sum_probs=223.0
Q ss_pred ccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeecc
Q 037197 283 SLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDAS 362 (1009)
Q Consensus 283 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls 362 (1009)
+++.+++++|.++ .+|..+. ++|+.|++++|.+++..+..|.++++|++|++++|.+++..|..+..+++|++|+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4555566655555 4444332 456666666666666656666666666666666666666666666666666677777
Q ss_pred CccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCccc--cccCCccCCCCcccEEEeecccccc
Q 037197 363 SNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLIS--GTIPVGLGNLPSLQRLEMANNNLTG 440 (1009)
Q Consensus 363 ~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~ 440 (1009)
+|.++ .+|..+. ++|++|++++|++++..+..+.++++|+.|++++|.++ +..|..+..+ +|+.|++++|++++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 77666 4444443 67888888888888766667888888888888888885 3667778777 89999999999984
Q ss_pred cCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccc
Q 037197 441 QIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIAS 520 (1009)
Q Consensus 441 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~ 520 (1009)
+|..+. ++|+.|++++|++++..+..|..+++|+.|++++|++++..+..+..+++|+.|+|++|+++ .+|..+..
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 262 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD 262 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc
Confidence 666554 78999999999999988889999999999999999999888888999999999999999998 78888999
Q ss_pred cccceeeeecCcccccCCCcccccc------cccceecCCccccc--cccCcCcCCCCCCcEEecCCCc
Q 037197 521 CEKLVSLNLRNNRFSGEIPKAVATM------PTLAILDMSNNSLF--GRIPENFGASPALEMLNLSYNK 581 (1009)
Q Consensus 521 l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~ls~N~ 581 (1009)
+++|+.|+|++|+|++..+..|..+ +.|+.|++++|++. +..|..|..++.|+.+++++|+
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 9999999999999997777777653 67899999999998 7788889999999999999885
No 293
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.2e-33 Score=321.29 Aligned_cols=244 Identities=14% Similarity=0.116 Sum_probs=178.1
Q ss_pred hcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC-ChhhHHHHHHHHHHHhccCC-Ccee---------------
Q 037197 698 ACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN-DIESGDDLFREVSLLGRLRH-RNIV--------------- 760 (1009)
Q Consensus 698 ~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~H-pniv--------------- 760 (1009)
..|...+.||+|+||.||+|.+..+++.||||++..... .....+.+.+|+.+++.++| +|..
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 346778899999999999999999999999999864322 22334567799999999977 2211
Q ss_pred ------eEEeEEEc-----CCeEEEEEeccCCCChhhhhcCC---ccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 037197 761 ------RLLGYLHN-----ETNVMMVYDYMPNDSLGEALHGK---EAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVI 826 (1009)
Q Consensus 761 ------~l~~~~~~-----~~~~~lV~E~~~~gsL~~~l~~~---~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iv 826 (1009)
.+..++.. ...++++|+++ +++|.++++.. ......+++..++.++.||++||+|||++ +|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 11111111 22457777765 78999988421 11233478899999999999999999999 999
Q ss_pred EeccCCCcEEeCCCCcEEEcccccceecccCCCceeeecccCcccCCccc----------CCCCCCcccchHhHHHHHHH
Q 037197 827 HRDIKSNNILLDANLEARIADFGLARMMLHKNETVSMVAGSYGYIAPEYG----------YTLKVDEKSDIYSFGVVLLE 896 (1009)
Q Consensus 827 H~dlk~~NIll~~~~~~kl~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDv~SlGvvl~e 896 (1009)
||||||+||+++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++||
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 9999999999999999999999999865332 344567 999999988 56668899999999999999
Q ss_pred HHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCccccccCchHHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Q 037197 897 LLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLLVLRIAVLCTAKLPKGRPTMRDVI 972 (1009)
Q Consensus 897 lltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl 972 (1009)
|++|+.||...... +.....+. ...... ..+.+++.+||+.||++||++.|++
T Consensus 310 lltg~~Pf~~~~~~-------------------~~~~~~~~-~~~~~~---~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 310 IWCADLPNTDDAAL-------------------GGSEWIFR-SCKNIP---QPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHHSSCCCCTTGGG-------------------SCSGGGGS-SCCCCC---HHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HHHCCCCCCCcchh-------------------hhHHHHHh-hcccCC---HHHHHHHHHHccCChhhCcCHHHHH
Confidence 99999999743211 00111111 111111 2466788899999999999976664
No 294
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.6e-32 Score=304.97 Aligned_cols=294 Identities=23% Similarity=0.269 Sum_probs=189.2
Q ss_pred ccCcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCCcCCccccCccccceeeec
Q 037197 115 ALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLS 194 (1009)
Q Consensus 115 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~ 194 (1009)
+|++++++++.+. .+|..+. ++|++|+|++|++++..|..++++++|++|++++|.+++..|..|+++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 5677777777765 4565553 577777777777776666677777777777777777777777777777788888888
Q ss_pred cccccccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEeccCcccc--ccCcccCCCCCCcEEEcccCCcCC
Q 037197 195 GNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSG--QIPPALGRLKKLTTVYLYKNNFTG 272 (1009)
Q Consensus 195 ~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~l~~l~~L~~L~L~~n~l~~ 272 (1009)
+|.++ .+|..+. ++|++|++++|++++..+..|+++++|++|++++|.++. ..+..+..+ +|++|++++|.+++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 87777 5555544 677777777777776666667777777777777777753 556666666 67777777777764
Q ss_pred CCCcccccccccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccC
Q 037197 273 KIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQ 352 (1009)
Q Consensus 273 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 352 (1009)
+|..+. ++|++|+|++|.+++..+..+..+++|++|++++|++++..+..+..+++|+.|++++|+++ .+|..+..
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 262 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD 262 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc
Confidence 444433 56667777777766665566666666666666666666666656666666666666666665 44555555
Q ss_pred CCCCceeeccCccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCccc--cccCCccCCCCcccE
Q 037197 353 SSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLIS--GTIPVGLGNLPSLQR 430 (1009)
Q Consensus 353 ~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~ 430 (1009)
+++|+.|++++|.+++..+..|+.... .....+|+.|++++|.+. +..|..|..+++|+.
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~~------------------~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~ 324 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVGF------------------GVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLA 324 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSSC------------------CSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTT
T ss_pred CccCCEEECCCCCCCccChhHcccccc------------------ccccccccceEeecCcccccccCcccccccchhhh
Confidence 555666666666555444444432200 001244566666666665 455566666777777
Q ss_pred EEeeccc
Q 037197 431 LEMANNN 437 (1009)
Q Consensus 431 L~L~~N~ 437 (1009)
|++++|+
T Consensus 325 l~l~~n~ 331 (332)
T 2ft3_A 325 IQFGNYK 331 (332)
T ss_dssp EEC----
T ss_pred hhccccc
Confidence 7776664
No 295
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=4.7e-32 Score=302.63 Aligned_cols=289 Identities=23% Similarity=0.311 Sum_probs=189.5
Q ss_pred CCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEcc
Q 037197 259 KLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELW 338 (1009)
Q Consensus 259 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 338 (1009)
+++.++++++.++ .+|..+. ++|+.|+|++|++++..+..|..+++|++|++++|++++..|..|.++++|++|+++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 4556666666655 3444332 455555555555554444455555555555555555555555555555555555555
Q ss_pred CCccCccCCccccCCCCCceeeccCccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCcccc--
Q 037197 339 KNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISG-- 416 (1009)
Q Consensus 339 ~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~-- 416 (1009)
+|.++ .+|..+. ++|++|++++|++++..+..+.++++|+.|++++|.+..
T Consensus 109 ~n~l~-------------------------~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 161 (330)
T 1xku_A 109 KNQLK-------------------------ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSG 161 (330)
T ss_dssp SSCCS-------------------------BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGG
T ss_pred CCcCC-------------------------ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccC
Confidence 55544 2333322 456666666666665555556666666666666666642
Q ss_pred ccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCccccccc
Q 037197 417 TIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQA 496 (1009)
Q Consensus 417 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 496 (1009)
..+..+..+++|++|++++|+++ .+|..+. ++|+.|++++|++++..|..|..+++|+.|++++|++++..+..+..
T Consensus 162 ~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 238 (330)
T 1xku_A 162 IENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLAN 238 (330)
T ss_dssp BCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGG
T ss_pred cChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccC
Confidence 55566677777777777777776 3554443 67777777777777777777777777888888888777766677788
Q ss_pred CCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCccccc------ccccceecCCcccccc--ccCcCcCC
Q 037197 497 CPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVAT------MPTLAILDMSNNSLFG--RIPENFGA 568 (1009)
Q Consensus 497 l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~Ls~N~l~~--~~p~~~~~ 568 (1009)
+++|+.|+|++|+++ .+|..+..+++|++|+|++|+|++..+..|.. .+.|+.|++++|++.. ..|..|..
T Consensus 239 l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~ 317 (330)
T 1xku_A 239 TPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRC 317 (330)
T ss_dssp STTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTT
T ss_pred CCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCcccccc
Confidence 888888888888887 67777888888888888888888666666643 3678888888888863 56778888
Q ss_pred CCCCcEEecCCCc
Q 037197 569 SPALEMLNLSYNK 581 (1009)
Q Consensus 569 l~~L~~L~ls~N~ 581 (1009)
+..++.++|++|+
T Consensus 318 ~~~l~~l~L~~N~ 330 (330)
T 1xku_A 318 VYVRAAVQLGNYK 330 (330)
T ss_dssp CCCGGGEEC----
T ss_pred ccceeEEEecccC
Confidence 8888888888885
No 296
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=7.5e-32 Score=301.02 Aligned_cols=295 Identities=22% Similarity=0.272 Sum_probs=172.4
Q ss_pred ccCcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCCcCCccccCccccceeeec
Q 037197 115 ALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLS 194 (1009)
Q Consensus 115 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~ 194 (1009)
+|++++++++.+. .+|..+. +.|++|+|++|++++..+..++++++|++|+|++|.+++..|..|+++++|++|+|+
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 4555555555544 3444332 456666666666665555566666666666666666666666666666677777777
Q ss_pred cccccccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEeccCcccc--ccCcccCCCCCCcEEEcccCCcCC
Q 037197 195 GNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSG--QIPPALGRLKKLTTVYLYKNNFTG 272 (1009)
Q Consensus 195 ~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~l~~l~~L~~L~L~~n~l~~ 272 (1009)
+|.++ .+|..+. ++|++|++++|++++..+..|+++++|++|++++|.+.. ..+..+..+++|++|++++|.++.
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 66666 4454443 566667777777666656666777777777777776643 455666666677777777776663
Q ss_pred CCCcccccccccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccC
Q 037197 273 KIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQ 352 (1009)
Q Consensus 273 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 352 (1009)
+|..+. ++|++|++++|++++..|..+..+++|++|++++|++++..+..+..+++|+.|++++|.++ .+|..+..
T Consensus 186 -l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 261 (330)
T 1xku_A 186 -IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 261 (330)
T ss_dssp -CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTT
T ss_pred -CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhcc
Confidence 444332 56666666666666555566666666666666666666655555666666666666666655 44445555
Q ss_pred CCCCceeeccCccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCcccc--ccCCccCCCCcccE
Q 037197 353 SSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISG--TIPVGLGNLPSLQR 430 (1009)
Q Consensus 353 ~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~ 430 (1009)
++.|++|++++|.+++..+..|+... ......+++.|++++|.+.. ..|..|..+.+++.
T Consensus 262 l~~L~~L~l~~N~i~~~~~~~f~~~~------------------~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~ 323 (330)
T 1xku_A 262 HKYIQVVYLHNNNISAIGSNDFCPPG------------------YNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAA 323 (330)
T ss_dssp CSSCCEEECCSSCCCCCCTTSSSCSS------------------CCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGG
T ss_pred CCCcCEEECCCCcCCccChhhcCCcc------------------cccccccccceEeecCcccccccCccccccccceeE
Confidence 55555566666655544444443220 00112345555555555542 34455666666666
Q ss_pred EEeeccc
Q 037197 431 LEMANNN 437 (1009)
Q Consensus 431 L~L~~N~ 437 (1009)
++|++|+
T Consensus 324 l~L~~N~ 330 (330)
T 1xku_A 324 VQLGNYK 330 (330)
T ss_dssp EEC----
T ss_pred EEecccC
Confidence 6666663
No 297
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=3.9e-36 Score=352.54 Aligned_cols=379 Identities=20% Similarity=0.130 Sum_probs=226.9
Q ss_pred cccceeeeccccccccCCcc-CCCCcchhhhhccccccccc----CCccccCCCCccEEEeccCccccccCcccC-CCC-
Q 037197 186 QKLKFLGLSGNNLTGKIPPE-LGQLSSLETIILGYNAFEGE----IPAEFGNLTNLRYLDLAVGSLSGQIPPALG-RLK- 258 (1009)
Q Consensus 186 ~~L~~L~L~~n~l~~~~p~~-l~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~-~l~- 258 (1009)
++|++|+|++|+++...... +..+++|++|+|++|++++. ++..+..+++|++|+|++|.+++..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 56788888888887543333 66777888888888887743 456677778888888888887764443322 233
Q ss_pred ---CCcEEEcccCCcCC----CCCcccccccccccccccccccCCCcchhhhc-----ccCCCeEeccccccCCCC----
Q 037197 259 ---KLTTVYLYKNNFTG----KIPPELGSITSLAFLDLSDNQISGEIPVKLAE-----LKNLQLLNLMCNQLTGLI---- 322 (1009)
Q Consensus 259 ---~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~-----l~~L~~L~L~~N~l~~~~---- 322 (1009)
+|++|+|++|.++. .++..+..+++|++|+|++|.+++..+..+.. .++|++|++++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 57777777777774 34566667777777777777776544444332 345666666666666532
Q ss_pred CcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccCCcCcc-CCCCCceeeccccccccc----CCcc
Q 037197 323 PDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLC-DSGNLTKLILFNNSFSGT----FPVS 397 (1009)
Q Consensus 323 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~-~l~~L~~L~l~~N~l~~~----~p~~ 397 (1009)
+..+..+++|++|++++|.+.+..+..+.. .+. ..++|+.|++++|.+++. ++..
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~--------------------~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 222 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQ--------------------GLKDSPCQLEALKLESCGVTSDNCRDLCGI 222 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHH--------------------HHHHSCCCCCEEECTTSCCBTTHHHHHHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHH--------------------HHhcCCCCceEEEccCCCCcHHHHHHHHHH
Confidence 333444555666666655554433222211 000 123444555555544432 3444
Q ss_pred cccCccccEEEcccCcccccc-----CCccCCCCcccEEEeeccccccc----CCcCCcCCCCCcEEecccCcccccCCC
Q 037197 398 LSTCKSLVRVRVQNNLISGTI-----PVGLGNLPSLQRLEMANNNLTGQ----IPDDISLSTSLSFVDISWNHLESYLPS 468 (1009)
Q Consensus 398 l~~~~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 468 (1009)
+..+++|++|++++|.+++.. +..+..+++|++|++++|++++. ++..+..+++|+.|++++|.+++..+.
T Consensus 223 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 302 (461)
T 1z7x_W 223 VASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGAR 302 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHH
T ss_pred HHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHH
Confidence 455555556666655555322 12223455666666666666542 444555566666666666666543332
Q ss_pred cccC-----CcccchhccccCcccCC----cccccccCCcCcEEEeecCCCCCCCCccccc-----cccceeeeecCccc
Q 037197 469 SILS-----IPSLQTFMASHNNLQAK----IPNELQACPSLSVLDLSSNSLSGEIPASIAS-----CEKLVSLNLRNNRF 534 (1009)
Q Consensus 469 ~~~~-----l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l 534 (1009)
.+.. .++|+.|++++|.+++. ++..+..+++|+.|||++|++++..+..+.. .++|+.|+|++|++
T Consensus 303 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i 382 (461)
T 1z7x_W 303 LLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDV 382 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCC
Confidence 2222 24666777777766654 4566677788888888888887665555543 56888888888888
Q ss_pred cc----CCCcccccccccceecCCccccccccCcCcC-----CCCCCcEEecCCCcccc
Q 037197 535 SG----EIPKAVATMPTLAILDMSNNSLFGRIPENFG-----ASPALEMLNLSYNKLEG 584 (1009)
Q Consensus 535 ~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~ls~N~l~g 584 (1009)
++ .+|..+..+++|+.|||++|++++.-...+. ....|+.|++.+|.+..
T Consensus 383 ~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~ 441 (461)
T 1z7x_W 383 SDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE 441 (461)
T ss_dssp CHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred ChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCH
Confidence 76 6777888888888888888888764211111 12345666666555543
No 298
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.98 E-value=8e-33 Score=309.73 Aligned_cols=244 Identities=14% Similarity=0.120 Sum_probs=181.5
Q ss_pred HhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCC------ChhhHHHHHHHHHHHhccC---------CCceee
Q 037197 697 LACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN------DIESGDDLFREVSLLGRLR---------HRNIVR 761 (1009)
Q Consensus 697 ~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~---------Hpniv~ 761 (1009)
.++|+..+.||+|+||+||+|++ +++.||||++..... .....+.+.+|++++++++ ||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 45688999999999999999998 479999999976532 1223466778999988885 777777
Q ss_pred EEeEEE------------------------------cCCeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHH
Q 037197 762 LLGYLH------------------------------NETNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIA 811 (1009)
Q Consensus 762 l~~~~~------------------------------~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~ 811 (1009)
+.+.+. +....++||||+++|++.+.+... .+++..+..++.||+
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~-----~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK-----LSSLATAKSILHQLT 171 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT-----CCCHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc-----CCCHHHHHHHHHHHH
Confidence 776542 267899999999999776666432 278899999999999
Q ss_pred HHHHHHH-hcCCCCeEEeccCCCcEEeCCCC--------------------cEEEcccccceecccCCCceeeecccCcc
Q 037197 812 QGLNYLH-HDCQPPVIHRDIKSNNILLDANL--------------------EARIADFGLARMMLHKNETVSMVAGSYGY 870 (1009)
Q Consensus 812 ~~L~~LH-~~~~~~ivH~dlk~~NIll~~~~--------------------~~kl~DfGls~~~~~~~~~~~~~~gt~~y 870 (1009)
.||+||| +. +|+||||||+|||++.++ .+||+|||+++..... ...||+.|
T Consensus 172 ~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y 243 (336)
T 2vuw_A 172 ASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVS 243 (336)
T ss_dssp HHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCT
T ss_pred HHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecc
Confidence 9999999 88 999999999999999887 8999999999876432 34799999
Q ss_pred cCCcccCCCCCCcccchHhHHHH-HHHHHhCCCCCCCCCCCCccHHHHHHHHHhhccccccccCccccccCchHHHHHHH
Q 037197 871 IAPEYGYTLKVDEKSDIYSFGVV-LLELLTGKMPLDPAFGGSKDIVEWVLSMIKSNKAQDEALDPSIAGQCKHVQEEMLL 949 (1009)
Q Consensus 871 ~aPE~~~~~~~~~~sDv~SlGvv-l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 949 (1009)
+|||++.+.. +.++||||+|++ .+++++|..||.. ..................... ..........+
T Consensus 244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~-----~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~s~~ 311 (336)
T 2vuw_A 244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN-----VLWLHYLTDKMLKQMTFKTKC------NTPAMKQIKRK 311 (336)
T ss_dssp TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH-----HHHHHHHHHHHHHTCCCSSCC------CSHHHHHHHHH
T ss_pred cChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc-----hhhhhHHHHhhhhhhccCccc------chhhhhhcCHH
Confidence 9999988666 899999998777 7888889999851 011011111111111001000 01112233456
Q ss_pred HHHHHHHhccCCCCCCCCHHHHH
Q 037197 950 VLRIAVLCTAKLPKGRPTMRDVI 972 (1009)
Q Consensus 950 l~~l~~~cl~~dp~~RPs~~evl 972 (1009)
+.+++.+|++.| |++|++
T Consensus 312 ~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 312 IQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHHhccC-----CHHHHH
Confidence 788999999976 888877
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=3e-36 Score=353.45 Aligned_cols=355 Identities=21% Similarity=0.256 Sum_probs=190.7
Q ss_pred CCCCeEecccCcccccCCcc-ccccCccCcccccccccCC----CCCCCCCCCcCCeEEecCCCCCCCCCCcccc-CCC-
Q 037197 90 RSLSSLNICCNEFASSLPKS-LANLTALKSMDVSQNNFIG----SFPTGLGKASGLTSVNASSNNFSGFLPEDLG-NAT- 162 (1009)
Q Consensus 90 ~~L~~L~L~~n~~~~~~~~~-l~~l~~L~~L~Ls~n~l~~----~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~-~l~- 162 (1009)
++|++|+|++|++++..... +..+++|++|+|++|.+++ .++..+..+++|++|+|++|.+++..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 45788888888887654433 7778888888888888764 2455566667777777777777654343332 244
Q ss_pred ---CCCeeeccCCccCC----cCCccccCccccceeeeccccccccCCccCC-----CCcchhhhhcccccccccC----
Q 037197 163 ---SLESLDFRGSFFEG----SVPTSFRNLQKLKFLGLSGNNLTGKIPPELG-----QLSSLETIILGYNAFEGEI---- 226 (1009)
Q Consensus 163 ---~L~~L~L~~n~~~~----~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~-----~l~~L~~L~L~~n~l~~~~---- 226 (1009)
+|++|+|++|.++. .++..+..+++|++|+|++|.+++..+..+. ..++|++|+|++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 57777777776663 3355666666666666666666543332221 1234555555555554422
Q ss_pred CccccCCCCccEEEeccCccccccCcccCCCCCCcEEEcccCCcCCCCCcccc-cccccccccccccccCCC----cchh
Q 037197 227 PAEFGNLTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKIPPELG-SITSLAFLDLSDNQISGE----IPVK 301 (1009)
Q Consensus 227 ~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~----~~~~ 301 (1009)
+..+..+++|++|++++|.+++..+..+.. .+. ..++|++|+|++|.+++. ++..
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~--------------------~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 222 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQ--------------------GLKDSPCQLEALKLESCGVTSDNCRDLCGI 222 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHH--------------------HHHHSCCCCCEEECTTSCCBTTHHHHHHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHH--------------------HHhcCCCCceEEEccCCCCcHHHHHHHHHH
Confidence 333344445555555555444332222211 000 123444555555544432 2344
Q ss_pred hhcccCCCeEeccccccCCCC-----CcCCCCCCcccEEEccCCccCcc----CCccccCCCCCceeeccCccccccCCc
Q 037197 302 LAELKNLQLLNLMCNQLTGLI-----PDKLGELTKLEVLELWKNSLIGS----LPMRLGQSSPLRRLDASSNLLSGEIPT 372 (1009)
Q Consensus 302 l~~l~~L~~L~L~~N~l~~~~-----~~~l~~l~~L~~L~L~~N~l~~~----~~~~~~~~~~L~~L~Ls~N~l~~~~~~ 372 (1009)
+..+++|++|++++|++++.. +..+..+++|++|++++|.+++. ++..+..+++|+.|++++|.+++..+.
T Consensus 223 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 302 (461)
T 1z7x_W 223 VASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGAR 302 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHH
T ss_pred HHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHH
Confidence 444555555555555544321 11222345555555555555543 334444455556666666655443333
Q ss_pred CccC-----CCCCceeeccccccccc----CCcccccCccccEEEcccCccccccCCccCC-----CCcccEEEeecccc
Q 037197 373 GLCD-----SGNLTKLILFNNSFSGT----FPVSLSTCKSLVRVRVQNNLISGTIPVGLGN-----LPSLQRLEMANNNL 438 (1009)
Q Consensus 373 ~l~~-----l~~L~~L~l~~N~l~~~----~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l 438 (1009)
.+.. .++|+.|++++|.+++. ++..+..+++|++|++++|.+++..+..+.. .++|++|+|++|++
T Consensus 303 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i 382 (461)
T 1z7x_W 303 LLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDV 382 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCC
Confidence 2222 14566666666666543 3444555566666666666666544433322 45666666666666
Q ss_pred cc----cCCcCCcCCCCCcEEecccCcccc
Q 037197 439 TG----QIPDDISLSTSLSFVDISWNHLES 464 (1009)
Q Consensus 439 ~~----~~p~~~~~l~~L~~L~Ls~N~l~~ 464 (1009)
++ .+|..+..+++|+.|++++|++++
T Consensus 383 ~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 383 SDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp CHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred ChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 64 455555556666666666666654
No 300
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=8.3e-32 Score=299.43 Aligned_cols=281 Identities=20% Similarity=0.307 Sum_probs=233.5
Q ss_pred HHHhhccCCCCCCCCCCCCCccccCCcCCceeeeEEeCC---CCceeEEeccccccccccccccccCCCCCeEecccCcc
Q 037197 26 SIKAGLIDPLNMLEDWKMPSNAAENGLLHCNWTGVWCNS---RGFVEKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEF 102 (1009)
Q Consensus 26 ~~k~~~~d~~~~l~~W~~~~~~~~~~~~~C~w~gv~C~~---~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~ 102 (1009)
+.|+++.|+..+|.+|+..- ..++|.|.+++|.. ...+. ...+....
T Consensus 20 ~~~~~~~~~~~aLl~~k~~~-----~~~~~~~~~~w~~~~~~~~~~~--~~~g~~~~----------------------- 69 (328)
T 4fcg_A 20 QGSTALRPYHDVLSQWQRHY-----NADRNRWHSAWRQANSNNPQIE--TRTGRALK----------------------- 69 (328)
T ss_dssp C--CCCCCHHHHHHHHHHHH-----HHCCTTHHHHHHHHTTTCTTSC--CSHHHHHH-----------------------
T ss_pred eccccCchHHHHHHHHHHhc-----cCCchhhhhhhccccccccccc--ccCCcchh-----------------------
Confidence 45566677767788897321 23679999999832 11111 11111000
Q ss_pred cccCCccc--cccCccCcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCCcCCc
Q 037197 103 ASSLPKSL--ANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVPT 180 (1009)
Q Consensus 103 ~~~~~~~l--~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~ 180 (1009)
.++..+ ...+++++|+|++|.+. .+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|.
T Consensus 70 --~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~ 144 (328)
T 4fcg_A 70 --ATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPA 144 (328)
T ss_dssp --HHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCG
T ss_pred --hhHHHHhcccccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcH
Confidence 011111 22366777777777776 67777888888888888888888 78889999999999999999999 8899
Q ss_pred cccCccccceeeeccccccccCCccCCC---------CcchhhhhcccccccccCCccccCCCCccEEEeccCccccccC
Q 037197 181 SFRNLQKLKFLGLSGNNLTGKIPPELGQ---------LSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIP 251 (1009)
Q Consensus 181 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~---------l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 251 (1009)
.++++++|++|+|++|++.+.+|..++. +++|++|+|++|+++ .+|..++++++|++|+|++|.+++ +|
T Consensus 145 ~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~ 222 (328)
T 4fcg_A 145 SIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LG 222 (328)
T ss_dssp GGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CC
T ss_pred HHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cc
Confidence 9999999999999999999999988765 999999999999999 889999999999999999999995 67
Q ss_pred cccCCCCCCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCc
Q 037197 252 PALGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTK 331 (1009)
Q Consensus 252 ~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~ 331 (1009)
..++.+++|++|+|++|++.+.+|..+..+++|++|+|++|.+.+.+|..+..+++|++|+|++|.+.+.+|..++++++
T Consensus 223 ~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~ 302 (328)
T 4fcg_A 223 PAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPA 302 (328)
T ss_dssp GGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCT
T ss_pred hhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEccCCccC
Q 037197 332 LEVLELWKNSLI 343 (1009)
Q Consensus 332 L~~L~L~~N~l~ 343 (1009)
|+.+++..|.+.
T Consensus 303 L~~l~l~~~~~~ 314 (328)
T 4fcg_A 303 NCIILVPPHLQA 314 (328)
T ss_dssp TCEEECCGGGSC
T ss_pred ceEEeCCHHHHH
Confidence 999999887654
No 301
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=1.2e-33 Score=342.37 Aligned_cols=433 Identities=18% Similarity=0.136 Sum_probs=198.1
Q ss_pred CCceeeeEEeCCCCceeEEeccccccccccccccccCCCCCeEecccCccc---ccCCcccc------------ccCccC
Q 037197 53 LHCNWTGVWCNSRGFVEKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFA---SSLPKSLA------------NLTALK 117 (1009)
Q Consensus 53 ~~C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~---~~~~~~l~------------~l~~L~ 117 (1009)
.|++|.+|.+....++ .+.+ .....++..+..+++|++|+|+++... +.+|..++ .+++|+
T Consensus 40 vck~W~~~~~~~~~~l---~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~ 115 (592)
T 3ogk_B 40 VCRRWFKIDSETREHV---TMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115 (592)
T ss_dssp SCHHHHHHHHHHCCEE---EESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred HhHHHHHhhhccccEE---EEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCC
Confidence 4568999966433222 2222 223334445667788888888765321 22332222 556666
Q ss_pred cccccccccCCCCCCCCCCC--cCCeEEecCCCC-CCC-CCCccccCCCCCCeeeccCCccCCcC----CccccCccccc
Q 037197 118 SMDVSQNNFIGSFPTGLGKA--SGLTSVNASSNN-FSG-FLPEDLGNATSLESLDFRGSFFEGSV----PTSFRNLQKLK 189 (1009)
Q Consensus 118 ~L~Ls~n~l~~~~p~~l~~l--~~L~~L~Ls~n~-l~~-~~p~~l~~l~~L~~L~L~~n~~~~~~----p~~~~~l~~L~ 189 (1009)
+|+|++|.+++..+..++.. .+|++|+|++|. ++. .++....++++|++|+|++|.+++.. +..+.++++|+
T Consensus 116 ~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~ 195 (592)
T 3ogk_B 116 SVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLE 195 (592)
T ss_dssp EEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCC
T ss_pred eEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCcc
Confidence 66666665554444444442 236666666554 110 11122234556666666666554432 22234455555
Q ss_pred eeeecccccc----ccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEeccCccccccCcccCCCCCCcEEEc
Q 037197 190 FLGLSGNNLT----GKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYL 265 (1009)
Q Consensus 190 ~L~L~~n~l~----~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 265 (1009)
+|++++|.++ +.++..+.++++|++|+|++|.+.+ ++..+.++++|++|+++........
T Consensus 196 ~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~--------------- 259 (592)
T 3ogk_B 196 VLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGM--------------- 259 (592)
T ss_dssp EEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTC---------------
T ss_pred EEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccch---------------
Confidence 5555555554 1222233344555555555555443 3344555555555555432211000
Q ss_pred ccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCCCeEeccccccCCCCC-cCCCCCCcccEEEccCCccCc
Q 037197 266 YKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIP-DKLGELTKLEVLELWKNSLIG 344 (1009)
Q Consensus 266 ~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~ 344 (1009)
+..+..+..+++|+.|+++++... .+|..+..+++|++|++++|.+++... ..+..+++|+.|+++ +.+.+
T Consensus 260 ------~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~ 331 (592)
T 3ogk_B 260 ------PEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGD 331 (592)
T ss_dssp ------TTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHH
T ss_pred ------HHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCH
Confidence 112223334444444444443222 344444444555555555554432211 123445555555554 22221
Q ss_pred -cCCccccCCCCCceeecc-----------CccccccCCcC-ccCCCCCceeecccccccccCCccccc-CccccEEEcc
Q 037197 345 -SLPMRLGQSSPLRRLDAS-----------SNLLSGEIPTG-LCDSGNLTKLILFNNSFSGTFPVSLST-CKSLVRVRVQ 410 (1009)
Q Consensus 345 -~~~~~~~~~~~L~~L~Ls-----------~N~l~~~~~~~-l~~l~~L~~L~l~~N~l~~~~p~~l~~-~~~L~~L~L~ 410 (1009)
.++.....+++|+.|+++ .|.+++..... +..+++|++|+++.|.+++..+..+.. +++|+.|+++
T Consensus 332 ~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~ 411 (592)
T 3ogk_B 332 RGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLV 411 (592)
T ss_dssp HHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEE
T ss_pred HHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEe
Confidence 222222334445555555 23333221111 223455666666555555544444443 5566666664
Q ss_pred ----cCccccc-----cCCccCCCCcccEEEeecc--cccccCCcCCc-CCCCCcEEecccCccccc-CCCcccCCcccc
Q 037197 411 ----NNLISGT-----IPVGLGNLPSLQRLEMANN--NLTGQIPDDIS-LSTSLSFVDISWNHLESY-LPSSILSIPSLQ 477 (1009)
Q Consensus 411 ----~N~l~~~-----~p~~~~~l~~L~~L~L~~N--~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~ 477 (1009)
.|.+++. ++..+.++++|+.|++++| .+++..+..+. .+++|+.|+|++|++++. ++..+..+++|+
T Consensus 412 ~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~ 491 (592)
T 3ogk_B 412 LLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQ 491 (592)
T ss_dssp ECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCC
T ss_pred ecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccC
Confidence 4455532 2223444566666666532 24433332222 245566666666655431 222234445555
Q ss_pred hhccccCcccCC-cccccccCCcCcEEEeecCCCCCC
Q 037197 478 TFMASHNNLQAK-IPNELQACPSLSVLDLSSNSLSGE 513 (1009)
Q Consensus 478 ~L~l~~N~l~~~-~p~~~~~l~~L~~LdLs~N~l~~~ 513 (1009)
.|++++|.+++. ++..+..+++|+.|+|++|++++.
T Consensus 492 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 492 KLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp EEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred eeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 555555554322 222334455555555555555543
No 302
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=9e-31 Score=295.12 Aligned_cols=282 Identities=18% Similarity=0.227 Sum_probs=228.4
Q ss_pred CCceeeeEEeCCCCceeEEeccccccccccccccccCCCCCeEecccCcccccCCccccccCccCcccccccccCCCCCC
Q 037197 53 LHCNWTGVWCNSRGFVEKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPT 132 (1009)
Q Consensus 53 ~~C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~ 132 (1009)
.+|.|.|+ |+ +++++++. +|..+. ++|++|+|++|.+++..+..+.++++|++|+|++|.+++..|.
T Consensus 28 ~~C~~~~~-c~---------~~~~~l~~-iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 94 (353)
T 2z80_A 28 LSCDRNGI-CK---------GSSGSLNS-IPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEED 94 (353)
T ss_dssp CEECTTSE-EE---------CCSTTCSS-CCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTT
T ss_pred CCCCCCeE-ee---------CCCCCccc-cccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHh
Confidence 56899887 74 35556653 455443 5899999999999887777899999999999999999988888
Q ss_pred CCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCCcCC-ccccCccccceeeeccc-cccccCCccCCCCc
Q 037197 133 GLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVP-TSFRNLQKLKFLGLSGN-NLTGKIPPELGQLS 210 (1009)
Q Consensus 133 ~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p-~~~~~l~~L~~L~L~~n-~l~~~~p~~l~~l~ 210 (1009)
.++++++|++|+|++|++++..+..++++++|++|++++|.+++..+ ..+.++++|++|++++| .+++..+..|+.++
T Consensus 95 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 174 (353)
T 2z80_A 95 SFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLT 174 (353)
T ss_dssp TTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCC
T ss_pred hcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCC
Confidence 89999999999999999996555668999999999999999985444 47899999999999999 57766678899999
Q ss_pred chhhhhcccccccccCCccccCCCCccEEEeccCccccccCcccCCCCCCcEEEcccCCcCCCCCcccc---cccccccc
Q 037197 211 SLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKIPPELG---SITSLAFL 287 (1009)
Q Consensus 211 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~---~l~~L~~L 287 (1009)
+|++|++++|++++..|..|+++++|++|++++|.++...+..+..+++|+.|++++|.+++..+..+. ....++.+
T Consensus 175 ~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l 254 (353)
T 2z80_A 175 FLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKF 254 (353)
T ss_dssp EEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEE
T ss_pred CCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhcc
Confidence 999999999999988899999999999999999998755444556689999999999999876555443 24566777
Q ss_pred cccccccCC----CcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCC
Q 037197 288 DLSDNQISG----EIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLP 347 (1009)
Q Consensus 288 ~Ls~N~l~~----~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 347 (1009)
+|+++.+++ .+|..+..+++|++|++++|+++.+.+..|.++++|+.|++++|++.+..|
T Consensus 255 ~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 255 TFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp EEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 777777664 467778888889999999998886655556888888888888888775443
No 303
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=1e-32 Score=334.18 Aligned_cols=395 Identities=18% Similarity=0.139 Sum_probs=246.7
Q ss_pred CccccceeeeccccccccCCccCCCC--cchhhhhccccc-ccc-cCCccccCCCCccEEEeccCccccc----cCcccC
Q 037197 184 NLQKLKFLGLSGNNLTGKIPPELGQL--SSLETIILGYNA-FEG-EIPAEFGNLTNLRYLDLAVGSLSGQ----IPPALG 255 (1009)
Q Consensus 184 ~l~~L~~L~L~~n~l~~~~p~~l~~l--~~L~~L~L~~n~-l~~-~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~l~ 255 (1009)
.+++|++|+|++|.+++..+..++.. .+|++|+|++|. ++. .++....++++|++|+|++|.+++. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 45566666666666555444444442 236666666554 211 1122233566777777777766544 223345
Q ss_pred CCCCCcEEEcccCCcCC----CCCcccccccccccccccccccCCCcchhhhcccCCCeEeccccccC---CCCCcCCCC
Q 037197 256 RLKKLTTVYLYKNNFTG----KIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLT---GLIPDKLGE 328 (1009)
Q Consensus 256 ~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~---~~~~~~l~~ 328 (1009)
.+++|++|++++|.+++ .++..+..+++|+.|+|++|.+.+ +|..+..+++|++|+++.+... +..+..+..
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 268 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVF 268 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhc
Confidence 56777777777777762 223334566777788887777774 6677777788888887753322 223445667
Q ss_pred CCcccEEEccCCccCccCCccccCCCCCceeeccCccccccCC-cCccCCCCCceeecccccccccCCcccccCccccEE
Q 037197 329 LTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIP-TGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRV 407 (1009)
Q Consensus 329 l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L 407 (1009)
+++|+.|+++++. .+.+|..+..+++|++|++++|.+++... ..+..+++|+.|+++++...+.++.....+++|++|
T Consensus 269 ~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L 347 (592)
T 3ogk_B 269 PRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRL 347 (592)
T ss_dssp CTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEE
T ss_pred cccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEE
Confidence 7788888887753 34556666777788888888887664433 334667788888887433333344444667888888
Q ss_pred Ecc-----------cCcccccc-CCccCCCCcccEEEeecccccccCCcCCcC-CCCCcEEecc----cCccccc-----
Q 037197 408 RVQ-----------NNLISGTI-PVGLGNLPSLQRLEMANNNLTGQIPDDISL-STSLSFVDIS----WNHLESY----- 465 (1009)
Q Consensus 408 ~L~-----------~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~----- 465 (1009)
+++ .|.+++.. +..+..+++|++|+++.|++++..+..+.. +++|+.|+++ .|++++.
T Consensus 348 ~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~ 427 (592)
T 3ogk_B 348 RIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNG 427 (592)
T ss_dssp EEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHH
T ss_pred EeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHH
Confidence 888 35665432 222345778888888888887766665554 7788888885 6677663
Q ss_pred CCCcccCCcccchhccccC--cccCCccccccc-CCcCcEEEeecCCCCC-CCCccccccccceeeeecCcccccC-CCc
Q 037197 466 LPSSILSIPSLQTFMASHN--NLQAKIPNELQA-CPSLSVLDLSSNSLSG-EIPASIASCEKLVSLNLRNNRFSGE-IPK 540 (1009)
Q Consensus 466 ~~~~~~~l~~L~~L~l~~N--~l~~~~p~~~~~-l~~L~~LdLs~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~ 540 (1009)
++..+.++++|+.|+++++ .+++..+..+.. +++|+.|+|++|++++ .++..+..+++|+.|+|++|.+++. ++.
T Consensus 428 ~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~ 507 (592)
T 3ogk_B 428 VRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAA 507 (592)
T ss_dssp HHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHH
T ss_pred HHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHH
Confidence 2223556777888887643 355544444433 7778888888888775 3344456678888888888887654 344
Q ss_pred ccccccccceecCCccccccccCcCcC-CCCCCcEEecCCC
Q 037197 541 AVATMPTLAILDMSNNSLFGRIPENFG-ASPALEMLNLSYN 580 (1009)
Q Consensus 541 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~ls~N 580 (1009)
.+..+++|+.|+|++|+++..--..+. .+|.+....+..+
T Consensus 508 ~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 508 AVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp HHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred HHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 456678888888888887765433332 4566555544443
No 304
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.4e-29 Score=285.41 Aligned_cols=280 Identities=20% Similarity=0.192 Sum_probs=183.9
Q ss_pred cccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeec
Q 037197 282 TSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDA 361 (1009)
Q Consensus 282 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L 361 (1009)
+.....++++|.++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.+++..+..+..+++|++|++
T Consensus 31 ~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 31 DRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp CTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 33444566666665 4444433 35666666666666555555556666666655555555544444444444555554
Q ss_pred cCccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCccccccC-CccCCCCcccEEEeecc-ccc
Q 037197 362 SSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIP-VGLGNLPSLQRLEMANN-NLT 439 (1009)
Q Consensus 362 s~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N-~l~ 439 (1009)
++|++++..+..+.++++|++|++++|++++..+ ..+.++++|++|++++| .++
T Consensus 108 ------------------------s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~ 163 (353)
T 2z80_A 108 ------------------------SYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFT 163 (353)
T ss_dssp ------------------------CSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCC
T ss_pred ------------------------CCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCcccc
Confidence 4444443333335555556666666665553322 35666666666666666 355
Q ss_pred ccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCcccc
Q 037197 440 GQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIA 519 (1009)
Q Consensus 440 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~ 519 (1009)
+..+..+..+++|+.|++++|++++..|..+..+++|++|++++|++....+..+..+++|+.|+|++|++++..+..+.
T Consensus 164 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 243 (353)
T 2z80_A 164 KIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELS 243 (353)
T ss_dssp EECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC---
T ss_pred ccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccc
Confidence 45556666667777777777777776677777777777777777777644444455688888899999988876665543
Q ss_pred ---ccccceeeeecCccccc----CCCcccccccccceecCCccccccccCcCcCCCCCCcEEecCCCccccCCCC
Q 037197 520 ---SCEKLVSLNLRNNRFSG----EIPKAVATMPTLAILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEGPVPS 588 (1009)
Q Consensus 520 ---~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~ 588 (1009)
....++.++|++|.+++ .+|..+..+++|+.|||++|+++...+..|..+++|++|+|++|++++..|.
T Consensus 244 ~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 244 TGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp ---CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred cccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 35667888888888876 5788899999999999999999954444468999999999999999998874
No 305
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=4.2e-30 Score=283.61 Aligned_cols=286 Identities=25% Similarity=0.287 Sum_probs=224.8
Q ss_pred CCceeeeEEeCCCCceeEEeccccccccccccccccCCCCCeEecccCcccccCCccccccCccCcccccccccCCC--C
Q 037197 53 LHCNWTGVWCNSRGFVEKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGS--F 130 (1009)
Q Consensus 53 ~~C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~--~ 130 (1009)
+.|.|++|.|+..+ ++ .+|..+ .++|++|+|++|.+++..+..++++++|++|+|++|.++.. .
T Consensus 5 C~C~~~~l~c~~~~-----------l~-~ip~~~--~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~ 70 (306)
T 2z66_A 5 CSCSGTEIRCNSKG-----------LT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCC 70 (306)
T ss_dssp CEEETTEEECCSSC-----------CS-SCCSCC--CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEE
T ss_pred CeeCCCEEEcCCCC-----------cc-cCCCCC--CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCc
Confidence 35899999996532 22 233322 25788899999988755445578899999999999888632 3
Q ss_pred CCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCCcCC-ccccCccccceeeeccccccccCCccCCCC
Q 037197 131 PTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVP-TSFRNLQKLKFLGLSGNNLTGKIPPELGQL 209 (1009)
Q Consensus 131 p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 209 (1009)
|..+..+++|++|+|++|.+. .+|..+..+++|++|++++|.+++..+ ..+.++++|++|++++|.+++..+..+..+
T Consensus 71 ~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 149 (306)
T 2z66_A 71 SQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL 149 (306)
T ss_dssp EHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTC
T ss_pred ccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccC
Confidence 566667888999999999888 567778889999999999998886655 578888999999999999988888888889
Q ss_pred cchhhhhcccccccc-cCCccccCCCCccEEEeccCccccccCcccCCCCCCcEEEcccCCcCCCCCccccccccccccc
Q 037197 210 SSLETIILGYNAFEG-EIPAEFGNLTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLD 288 (1009)
Q Consensus 210 ~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 288 (1009)
++|++|++++|.+++ ..|..|..+++|++|++++|++++..|..+..+++|++|+|++|.+++..+..+..+++|++|+
T Consensus 150 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 229 (306)
T 2z66_A 150 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLD 229 (306)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEE
T ss_pred cCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeE
Confidence 999999999999886 5788889999999999999999888888899999999999999999877777788889999999
Q ss_pred ccccccCCCcchhhhccc-CCCeEeccccccCCCCC--cCCCCCCcccEEEccCCccCccCCccccCC
Q 037197 289 LSDNQISGEIPVKLAELK-NLQLLNLMCNQLTGLIP--DKLGELTKLEVLELWKNSLIGSLPMRLGQS 353 (1009)
Q Consensus 289 Ls~N~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~~~--~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~ 353 (1009)
|++|++++..|..+..++ +|++|++++|.+++... .....+...+.+.+..+.+....|..+.+.
T Consensus 230 L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g~ 297 (306)
T 2z66_A 230 YSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGM 297 (306)
T ss_dssp CTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGTTC
T ss_pred CCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhCCc
Confidence 999999888888888874 89999999999876421 112223444555566677777777666553
No 306
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=3.1e-29 Score=276.68 Aligned_cols=280 Identities=21% Similarity=0.226 Sum_probs=169.5
Q ss_pred cccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCcc--CCccccCCCCCceeeccC
Q 037197 286 FLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGS--LPMRLGQSSPLRRLDASS 363 (1009)
Q Consensus 286 ~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~--~~~~~~~~~~L~~L~Ls~ 363 (1009)
.++++++.++ .+|..+. ++|++|++++|+++...+..|.++++|++|++++|.++.. .+..+..+++|++|++++
T Consensus 11 ~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred EEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 3444444444 3333222 3555555555555544444455555666666665555422 234444555666666666
Q ss_pred ccccccCCcCccCCCCCceeecccccccccCC-cccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccc-c
Q 037197 364 NLLSGEIPTGLCDSGNLTKLILFNNSFSGTFP-VSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTG-Q 441 (1009)
Q Consensus 364 N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p-~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~ 441 (1009)
|.+. .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+.+..+..+..+++|++|++++|++++ .
T Consensus 88 n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 166 (306)
T 2z66_A 88 NGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF 166 (306)
T ss_dssp CSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGE
T ss_pred Cccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccccc
Confidence 6665 344455566666666666666665443 456666677777777777766666666677777777777777765 4
Q ss_pred CCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCcccccc
Q 037197 442 IPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASC 521 (1009)
Q Consensus 442 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l 521 (1009)
+|..+..+++|+.|++++|++++..|..|..+++|+.|++++|++++..+..+..+++|+.|||++|++++..|..+..+
T Consensus 167 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 246 (306)
T 2z66_A 167 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHF 246 (306)
T ss_dssp ECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCC
T ss_pred chhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhh
Confidence 66666677777777777777776666666666666666666666666555566667777777777777776666666666
Q ss_pred -ccceeeeecCcccccCCC--cccccccccceecCCccccccccCcCcCCC
Q 037197 522 -EKLVSLNLRNNRFSGEIP--KAVATMPTLAILDMSNNSLFGRIPENFGAS 569 (1009)
Q Consensus 522 -~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 569 (1009)
++|+.|+|++|.+++.-+ .....+..++.+.+..|.+....|..+...
T Consensus 247 ~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g~ 297 (306)
T 2z66_A 247 PSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGM 297 (306)
T ss_dssp CTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGTTC
T ss_pred hccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhCCc
Confidence 367777777777765422 112334445555556666666666655443
No 307
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=2.7e-30 Score=285.56 Aligned_cols=248 Identities=21% Similarity=0.248 Sum_probs=149.5
Q ss_pred cccCCCCCeEecccCcccccCCccccccCccCccccccccc-CCCCCCCCC-------CCcCCeEEecCCCCCCCCCCcc
Q 037197 86 IRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNF-IGSFPTGLG-------KASGLTSVNASSNNFSGFLPED 157 (1009)
Q Consensus 86 l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l-~~~~p~~l~-------~l~~L~~L~Ls~n~l~~~~p~~ 157 (1009)
+++.++|++|++++|.+ .+|..+... |++|+|++|.+ ...+|..+. ++++|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 44555666777777766 566655554 77777777766 334554444 5666666666666666666665
Q ss_pred c--cCCCCCCeeeccCCccCCcCCccccCc-----cccceeeeccccccccCCccCCCCcchhhhhccccccccc--CCc
Q 037197 158 L--GNATSLESLDFRGSFFEGSVPTSFRNL-----QKLKFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGE--IPA 228 (1009)
Q Consensus 158 l--~~l~~L~~L~L~~n~~~~~~p~~~~~l-----~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~--~~~ 228 (1009)
+ +.+++|++|+|++|.+++. |..++.+ ++|++|+|++|++++..|..|+.+++|++|+|++|++.+. .+.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 4 6666666666666666655 5656555 6666666666666665556666666666666666665543 222
Q ss_pred cc--cCCCCccEEEeccCcccc---ccCcccCCCCCCcEEEcccCCcCCCCC-cccccccccccccccccccCCCcchhh
Q 037197 229 EF--GNLTNLRYLDLAVGSLSG---QIPPALGRLKKLTTVYLYKNNFTGKIP-PELGSITSLAFLDLSDNQISGEIPVKL 302 (1009)
Q Consensus 229 ~~--~~l~~L~~L~L~~n~l~~---~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~l 302 (1009)
.+ +++++|++|+|++|++++ .....+..+++|++|+|++|++++..| ..+..+++|++|+|++|+|+ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 33 566666666666666652 112233455666666666666665543 33444566666666666665 455444
Q ss_pred hcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccC
Q 037197 303 AELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLI 343 (1009)
Q Consensus 303 ~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 343 (1009)
. ++|++|++++|+|++. |. +..+++|++|++++|+++
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 4 5566666666666655 33 555666666666666554
No 308
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=5.3e-30 Score=283.29 Aligned_cols=259 Identities=20% Similarity=0.204 Sum_probs=223.7
Q ss_pred CCceeeeEEeCC-CCceeEEeccccccccccccccccCCCCCeEecccCcc-cccCCcccc-------ccCccCcccccc
Q 037197 53 LHCNWTGVWCNS-RGFVEKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEF-ASSLPKSLA-------NLTALKSMDVSQ 123 (1009)
Q Consensus 53 ~~C~w~gv~C~~-~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~-~~~~~~~l~-------~l~~L~~L~Ls~ 123 (1009)
.|+.|..+.... ...++.++++++.+ .+|..+... |++|+|++|.+ ...+|..+. ++++|++|+|++
T Consensus 29 ~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~ 104 (312)
T 1wwl_A 29 NCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLEN 104 (312)
T ss_dssp GSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEE
T ss_pred hhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccC
Confidence 466666654422 24688899999999 677766655 99999999999 456787776 899999999999
Q ss_pred cccCCCCCCCC--CCCcCCeEEecCCCCCCCCCCccccCC-----CCCCeeeccCCccCCcCCccccCccccceeeeccc
Q 037197 124 NNFIGSFPTGL--GKASGLTSVNASSNNFSGFLPEDLGNA-----TSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLSGN 196 (1009)
Q Consensus 124 n~l~~~~p~~l--~~l~~L~~L~Ls~n~l~~~~p~~l~~l-----~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n 196 (1009)
|++++.+|..+ +.+++|++|+|++|++++. |..++.+ ++|++|+|++|.+.+..|..|+++++|++|+|++|
T Consensus 105 n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 183 (312)
T 1wwl_A 105 LEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDN 183 (312)
T ss_dssp EBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSC
T ss_pred CcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCC
Confidence 99999999987 9999999999999999987 8888887 99999999999999888899999999999999999
Q ss_pred ccccc--CCccC--CCCcchhhhhccccccccc--CC-ccccCCCCccEEEeccCccccccC-cccCCCCCCcEEEcccC
Q 037197 197 NLTGK--IPPEL--GQLSSLETIILGYNAFEGE--IP-AEFGNLTNLRYLDLAVGSLSGQIP-PALGRLKKLTTVYLYKN 268 (1009)
Q Consensus 197 ~l~~~--~p~~l--~~l~~L~~L~L~~n~l~~~--~~-~~~~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~n 268 (1009)
++.+. .|..+ +.+++|++|+|++|++++. ++ ..+.++++|++|+|++|++++..| ..+..+++|++|+|++|
T Consensus 184 ~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N 263 (312)
T 1wwl_A 184 PELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFT 263 (312)
T ss_dssp TTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTS
T ss_pred CcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCC
Confidence 98765 34444 8999999999999999832 22 446789999999999999998775 56777899999999999
Q ss_pred CcCCCCCcccccccccccccccccccCCCcchhhhcccCCCeEeccccccCCC
Q 037197 269 NFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGL 321 (1009)
Q Consensus 269 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 321 (1009)
.++ .+|..+. ++|++|+|++|+|++. |. +..+++|++|++++|++++.
T Consensus 264 ~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 264 GLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp CCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred ccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 999 7888776 8999999999999966 65 89999999999999999864
No 309
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=8.2e-28 Score=262.29 Aligned_cols=238 Identities=19% Similarity=0.157 Sum_probs=116.2
Q ss_pred cCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCcc-ccccCCcCccCCCCCceee
Q 037197 306 KNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNL-LSGEIPTGLCDSGNLTKLI 384 (1009)
Q Consensus 306 ~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~-l~~~~~~~l~~l~~L~~L~ 384 (1009)
++|++|++++|.+++..+..|..+++|++|++++|.+++..+..+..+++|++|++++|. +....|..+..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 345555555555554444445555555555555555544444444444444444444443 4433344444444445555
Q ss_pred cccccccccCCcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccc
Q 037197 385 LFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLES 464 (1009)
Q Consensus 385 l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 464 (1009)
+++|++++..|..+.++++|++|++++|++++..+..+..+++|++|+|++|++++..+..+..+++|+.|++++|
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n---- 187 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQN---- 187 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS----
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCC----
Confidence 5444444444444444444444444444444333334444444444444444444333333444444444444444
Q ss_pred cCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCccccc
Q 037197 465 YLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVAT 544 (1009)
Q Consensus 465 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 544 (1009)
++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.++...+.. .-
T Consensus 188 --------------------~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~ 246 (285)
T 1ozn_A 188 --------------------RVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PL 246 (285)
T ss_dssp --------------------CCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HH
T ss_pred --------------------cccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HH
Confidence 444444445555555555555555555544444555555555566655555433221 12
Q ss_pred ccccceecCCccccccccCcCcCC
Q 037197 545 MPTLAILDMSNNSLFGRIPENFGA 568 (1009)
Q Consensus 545 l~~L~~L~Ls~N~l~~~~p~~~~~ 568 (1009)
...++.++.+.|.+....|..+..
T Consensus 247 ~~~l~~~~~~~~~~~c~~p~~l~g 270 (285)
T 1ozn_A 247 WAWLQKFRGSSSEVPCSLPQRLAG 270 (285)
T ss_dssp HHHHHHCCSEECCCBEEESGGGTT
T ss_pred HHHHHhcccccCccccCCchHhCC
Confidence 233455555666666666665543
No 310
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.5e-27 Score=278.23 Aligned_cols=250 Identities=19% Similarity=0.163 Sum_probs=154.9
Q ss_pred CCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccCCcCccCCCCCceeeccc
Q 037197 308 LQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFN 387 (1009)
Q Consensus 308 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~ 387 (1009)
...++.+++.++.+ |..+. ++++.|+|++|.+++..+..|..+++|+.|+|++|.+++..+..|..+++|++|+|++
T Consensus 56 ~~~v~c~~~~l~~i-P~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLSEV-PQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCSSC-CSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcCcc-CCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 45566666666643 33332 4555566655555555555555555555555555555544444444444555555555
Q ss_pred ccccccCCcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEeccc-CcccccC
Q 037197 388 NSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISW-NHLESYL 466 (1009)
Q Consensus 388 N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~ 466 (1009)
|++++..+ ..|..+++|++|+|++|++++..+..+..+++|+.|++++ |.++.+.
T Consensus 133 n~l~~~~~------------------------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~ 188 (452)
T 3zyi_A 133 NWLTVIPS------------------------GAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYIS 188 (452)
T ss_dssp SCCSBCCT------------------------TTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEEC
T ss_pred CcCCccCh------------------------hhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccC
Confidence 44444444 4444555555555555555544444455555555555555 3344444
Q ss_pred CCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCccccccc
Q 037197 467 PSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMP 546 (1009)
Q Consensus 467 ~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 546 (1009)
+..|..+++|+.|++++|++++. | .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..|..++
T Consensus 189 ~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 266 (452)
T 3zyi_A 189 EGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLA 266 (452)
T ss_dssp TTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred hhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCC
Confidence 44555556666666666666543 2 366677788888888888877777788888888888888888877777788888
Q ss_pred ccceecCCccccccccCcCcCCCCCCcEEecCCCccccCC
Q 037197 547 TLAILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEGPV 586 (1009)
Q Consensus 547 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~i 586 (1009)
+|+.|||++|+|++..+..|..+++|+.|+|++|++....
T Consensus 267 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 267 SLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp TCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECST
T ss_pred CCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCC
Confidence 8888888888888777777788888888888888876543
No 311
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=2.4e-29 Score=278.64 Aligned_cols=267 Identities=23% Similarity=0.276 Sum_probs=143.9
Q ss_pred cccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccC
Q 037197 284 LAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASS 363 (1009)
Q Consensus 284 L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~ 363 (1009)
++.++++.+.+.......+..+++|++|++++|++++..|..|.++++|++|++++|.+++..+ +..+++|++|++++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 3444555555543333334445556666666666665555555666666666666665554433 55555555555555
Q ss_pred ccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCC
Q 037197 364 NLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIP 443 (1009)
Q Consensus 364 N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 443 (1009)
|.+++.. ..++|+.|++++|++++..+.. +++|++|++++|++++..+..+..+++|++|+|++|++++..+
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 161 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNF 161 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEG
T ss_pred Ccccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccH
Confidence 5555321 1245556666666555443322 3455666666666665555555556666666666666655444
Q ss_pred cCC-cCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccc
Q 037197 444 DDI-SLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCE 522 (1009)
Q Consensus 444 ~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~ 522 (1009)
..+ ..+++|++|+|++|+|++..+ ...+++|+.|+|++|++++ +|..+..++
T Consensus 162 ~~~~~~l~~L~~L~L~~N~l~~~~~--------------------------~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~ 214 (317)
T 3o53_A 162 AELAASSDTLEHLNLQYNFIYDVKG--------------------------QVVFAKLKTLDLSSNKLAF-MGPEFQSAA 214 (317)
T ss_dssp GGGGGGTTTCCEEECTTSCCCEEEC--------------------------CCCCTTCCEEECCSSCCCE-ECGGGGGGT
T ss_pred HHHhhccCcCCEEECCCCcCccccc--------------------------ccccccCCEEECCCCcCCc-chhhhcccC
Confidence 444 245555555555555554311 1124555555555555553 233355556
Q ss_pred cceeeeecCcccccCCCcccccccccceecCCccccc-cccCcCcCCCCCCcEEecC-CCccccCCCC
Q 037197 523 KLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLF-GRIPENFGASPALEMLNLS-YNKLEGPVPS 588 (1009)
Q Consensus 523 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~ls-~N~l~g~ip~ 588 (1009)
+|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++ +.+|..+..++.|+.|+++ .+.++|..|.
T Consensus 215 ~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 215 GVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp TCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred cccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 6666666666665 35555555666666666666665 5555555666666666666 3445555553
No 312
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=2.4e-27 Score=275.49 Aligned_cols=249 Identities=20% Similarity=0.179 Sum_probs=159.5
Q ss_pred CCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccCCcCccCCCCCceeeccc
Q 037197 308 LQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFN 387 (1009)
Q Consensus 308 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~ 387 (1009)
...++.+++.++.+ |..+. ++++.|+|++|.+.+..+..|..+++|+.|+|++|.++
T Consensus 45 ~~~v~c~~~~l~~i-P~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-------------------- 101 (440)
T 3zyj_A 45 FSKVICVRKNLREV-PDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIR-------------------- 101 (440)
T ss_dssp SCEEECCSCCCSSC-CSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCC--------------------
T ss_pred CCEEEeCCCCcCcC-CCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCC--------------------
Confidence 45566666666643 33332 45555555555555554455555555555555555554
Q ss_pred ccccccCCcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEeccc-CcccccC
Q 037197 388 NSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISW-NHLESYL 466 (1009)
Q Consensus 388 N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~ 466 (1009)
+..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++ |.+..+.
T Consensus 102 ----~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~ 177 (440)
T 3zyj_A 102 ----TIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYIS 177 (440)
T ss_dssp ----EECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEEC
T ss_pred ----ccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeC
Confidence 44444445555555555555555544444455555555555555555544444555555555555555 3344444
Q ss_pred CCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCccccccc
Q 037197 467 PSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMP 546 (1009)
Q Consensus 467 ~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 546 (1009)
+..|.++++|+.|++++|+++. +| .+..+++|+.|||++|++++..|..|.++++|+.|+|++|+|++..|..|..++
T Consensus 178 ~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 255 (440)
T 3zyj_A 178 EGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQ 255 (440)
T ss_dssp TTTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCT
T ss_pred cchhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCC
Confidence 4455666666666666666653 33 366778888888888888877788888888888888888888887788888888
Q ss_pred ccceecCCccccccccCcCcCCCCCCcEEecCCCccccC
Q 037197 547 TLAILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEGP 585 (1009)
Q Consensus 547 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ 585 (1009)
+|+.|||++|+|++..+..|..+++|+.|+|++|++...
T Consensus 256 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 256 SLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp TCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECS
T ss_pred CCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCC
Confidence 888888888888888888888888888888888887654
No 313
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.3e-27 Score=260.60 Aligned_cols=234 Identities=18% Similarity=0.189 Sum_probs=174.2
Q ss_pred CCceeeccCccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCc-cccccCCccCCCCcccEEEe
Q 037197 355 PLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNL-ISGTIPVGLGNLPSLQRLEM 433 (1009)
Q Consensus 355 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L 433 (1009)
.|+.|++++|.+++..+..|..+++|++|++++|.+++..|..+..+++|++|++++|. ++...|..+..+++|++|++
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l 112 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEEC
Confidence 34444444444444444445555555555555555555555566666666666666665 55555666777777777777
Q ss_pred ecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCC
Q 037197 434 ANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGE 513 (1009)
Q Consensus 434 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~ 513 (1009)
++|++++..|..+..+++|++|++++|++++..+..|..+++|+.|++++|++++..+..|..+++|+.|+|++|++++.
T Consensus 113 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 192 (285)
T 1ozn_A 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHV 192 (285)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccccc
Confidence 77777766666777777777777777777777667777788888888888888776667789999999999999999999
Q ss_pred CCccccccccceeeeecCcccccCCCcccccccccceecCCccccccccCcCcCCCCCCcEEecCCCccccCCCCC
Q 037197 514 IPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEGPVPSN 589 (1009)
Q Consensus 514 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~ 589 (1009)
.|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++....+.. .....++.+..+.|.+.+..|..
T Consensus 193 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 193 HPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGG
T ss_pred CHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchH
Confidence 9999999999999999999999877788999999999999999998755432 11234566778899999998864
No 314
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=2.8e-27 Score=275.88 Aligned_cols=244 Identities=23% Similarity=0.204 Sum_probs=140.4
Q ss_pred cCcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCCcCCccccCccccceeeecc
Q 037197 116 LKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLSG 195 (1009)
Q Consensus 116 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~ 195 (1009)
...++.+++.++ .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 345555555554 3454443 4666677777766666666666666677777766666666666666666777777777
Q ss_pred ccccccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEeccC-ccccccCcccCCCCCCcEEEcccCCcCCCC
Q 037197 196 NNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVG-SLSGQIPPALGRLKKLTTVYLYKNNFTGKI 274 (1009)
Q Consensus 196 n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n-~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 274 (1009)
|++++..+..|..+++|++|+|++|+++...+..|.++++|++|++++| .+....+..|..+++|++|+|++|++++.
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~- 211 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM- 211 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-
Confidence 7666555555666666666666666666555556666666666666663 33333334566666666666666666632
Q ss_pred CcccccccccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCC
Q 037197 275 PPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSS 354 (1009)
Q Consensus 275 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 354 (1009)
| .+..+++|++|+|++|++++..|..|..+++|+.|++++|++++..+..|.++++|+.|+|++|++++..+..+..++
T Consensus 212 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 290 (452)
T 3zyi_A 212 P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 290 (452)
T ss_dssp C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCT
T ss_pred c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcccc
Confidence 2 345555555555555555555555555555555555555555555555555555555555555544433333333333
Q ss_pred CCceeeccCc
Q 037197 355 PLRRLDASSN 364 (1009)
Q Consensus 355 ~L~~L~Ls~N 364 (1009)
+|+.|+|++|
T Consensus 291 ~L~~L~L~~N 300 (452)
T 3zyi_A 291 YLVELHLHHN 300 (452)
T ss_dssp TCCEEECCSS
T ss_pred CCCEEEccCC
Confidence 3333333333
No 315
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=3.8e-27 Score=281.47 Aligned_cols=268 Identities=26% Similarity=0.375 Sum_probs=144.5
Q ss_pred CCccEEEeccCccccccCcccCCCCCCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCCCeEec
Q 037197 234 TNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNL 313 (1009)
Q Consensus 234 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 313 (1009)
.+++.|++++|.++ .+|..+. ++|++|+|++|.++ .+|. .+++|++|+|++|+|+ .+|. .+++|++|++
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEEC
Confidence 35778888888887 5566554 67788888888777 3454 4567777777777776 3443 5567777777
Q ss_pred cccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccCCcCccCCCCCceeeccccccccc
Q 037197 314 MCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGT 393 (1009)
Q Consensus 314 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~ 393 (1009)
++|+++++.+ .+++|+.|++++|++++ +|.. +++|++|++++|.+++ +|.
T Consensus 109 s~N~l~~l~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~--------------------- 158 (622)
T 3g06_A 109 FSNPLTHLPA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA--------------------- 158 (622)
T ss_dssp CSCCCCCCCC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---------------------
T ss_pred cCCcCCCCCC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---------------------
Confidence 7777765432 34556666666666553 2221 2444444444444442 121
Q ss_pred CCcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCC
Q 037197 394 FPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSI 473 (1009)
Q Consensus 394 ~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 473 (1009)
.+++|+.|++++|++++ +| ..+++|+.|++++|+|++ +|.. +++|+.|++++|.++.+ |. .+
T Consensus 159 ------~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l-~~---~~ 220 (622)
T 3g06_A 159 ------LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSL-PA---LP 220 (622)
T ss_dssp ------CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSC-CC---CC
T ss_pred ------ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccccc-CC---CC
Confidence 12344444555555442 33 223455555555555552 3322 24555555555555542 21 12
Q ss_pred cccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecC
Q 037197 474 PSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDM 553 (1009)
Q Consensus 474 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 553 (1009)
++|+.|++++|++++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+..+++|+.|+|
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 344444444444443 22 23345555555555555 2333 3455555555555555 45555555555555555
Q ss_pred CccccccccCcCcCCC
Q 037197 554 SNNSLFGRIPENFGAS 569 (1009)
Q Consensus 554 s~N~l~~~~p~~~~~l 569 (1009)
++|++++.+|..+..+
T Consensus 292 ~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 292 EGNPLSERTLQALREI 307 (622)
T ss_dssp CSCCCCHHHHHHHHHH
T ss_pred cCCCCCCcCHHHHHhc
Confidence 5555555555544433
No 316
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=2.4e-29 Score=278.72 Aligned_cols=270 Identities=20% Similarity=0.184 Sum_probs=185.4
Q ss_pred cEEEccCCccCccCCccccCCCCCceeeccCccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccC
Q 037197 333 EVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNN 412 (1009)
Q Consensus 333 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N 412 (1009)
+..+++.+.+.......+..+++|++|++++|.+++..|..|..+++|++|++++|.+++..+ +..+++|++|++++|
T Consensus 13 ~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n 90 (317)
T 3o53_A 13 KIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNN 90 (317)
T ss_dssp EEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSS
T ss_pred eEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCC
Confidence 333444444433333333344455555555555555444555555566666666666654443 566666666666666
Q ss_pred ccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCccc
Q 037197 413 LISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPN 492 (1009)
Q Consensus 413 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 492 (1009)
++++.. ..++|++|++++|++++..+.. +++|+.|++++|++++..+..+..+++|+.|++++|++++..+.
T Consensus 91 ~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 162 (317)
T 3o53_A 91 YVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFA 162 (317)
T ss_dssp EEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGG
T ss_pred cccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHH
Confidence 666332 2367777777777777655443 46688888888888887777888888888888888888877777
Q ss_pred cc-ccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCccccccccCcCcCCCCC
Q 037197 493 EL-QACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASPA 571 (1009)
Q Consensus 493 ~~-~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 571 (1009)
.+ ..+++|+.|+|++|++++. |. ...+++|++|+|++|+|++ +|..+..+++|+.|||++|+++ .+|..+..++.
T Consensus 163 ~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~ 238 (317)
T 3o53_A 163 ELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQN 238 (317)
T ss_dssp GGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTT
T ss_pred HHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCC
Confidence 66 4789999999999999865 33 2358999999999999995 5666999999999999999999 57888999999
Q ss_pred CcEEecCCCccc-cCCCCC-CcccccCCcccccCcCCCCCCCCCCCC
Q 037197 572 LEMLNLSYNKLE-GPVPSN-GILMNINPNELIGNAGLCGSVLPPCSQ 616 (1009)
Q Consensus 572 L~~L~ls~N~l~-g~ip~~-~~~~~~~~~~~~~n~~lcg~~~~~c~~ 616 (1009)
|+.|+|++|+++ +.+|.. ..+..+......++..+.|.....|..
T Consensus 239 L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~~~~ 285 (317)
T 3o53_A 239 LEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTV 285 (317)
T ss_dssp CCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCCCSS
T ss_pred CCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhccCC
Confidence 999999999998 555532 112222222334455555555445543
No 317
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=5.2e-27 Score=272.63 Aligned_cols=245 Identities=22% Similarity=0.250 Sum_probs=106.0
Q ss_pred CcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCCcCCccccCccccceeeeccc
Q 037197 117 KSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLSGN 196 (1009)
Q Consensus 117 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n 196 (1009)
+.++.+++.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|.+.+..+..|.++++|++|+|++|
T Consensus 46 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 46 SKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp CEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 34455554443 3444333 34555555555555444444555555555555555554444444445555555555555
Q ss_pred cccccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEeccC-ccccccCcccCCCCCCcEEEcccCCcCCCCC
Q 037197 197 NLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVG-SLSGQIPPALGRLKKLTTVYLYKNNFTGKIP 275 (1009)
Q Consensus 197 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n-~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 275 (1009)
+++...+..|..+++|++|+|++|+++...+..|.++++|++|+|++| .+....+..|.++
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l------------------ 184 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGL------------------ 184 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTC------------------
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcc------------------
Confidence 544333334444444444444444444333334444444444444442 2222222233333
Q ss_pred cccccccccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCC
Q 037197 276 PELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSP 355 (1009)
Q Consensus 276 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 355 (1009)
++|++|+|++|+++ .+| .+..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..|..+++
T Consensus 185 ------~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 256 (440)
T 3zyj_A 185 ------SNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQS 256 (440)
T ss_dssp ------SSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTT
T ss_pred ------cccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCC
Confidence 34444444444333 222 1333444444444444444444444444444444444444444433333333444
Q ss_pred CceeeccCccccccCCcCccCCCCCceeecccccc
Q 037197 356 LRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSF 390 (1009)
Q Consensus 356 L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l 390 (1009)
|+.|+|++|.+++..+..|..+++|+.|++++|.+
T Consensus 257 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~ 291 (440)
T 3zyj_A 257 LVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 291 (440)
T ss_dssp CCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCE
T ss_pred CCEEECCCCCCCccChhHhccccCCCEEEcCCCCc
Confidence 44444444444433333333333444444444433
No 318
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=1.9e-28 Score=291.01 Aligned_cols=186 Identities=17% Similarity=0.092 Sum_probs=132.6
Q ss_pred eccCCceEEEEEEECCCCeEEEEEEcccCCCC--------hhhHHHHHHHHHHHhcc-CCCceeeEEeEEEcCCeEEEEE
Q 037197 706 IGMGGNGIVYKAEFHRPHMVVAVKKLWRSDND--------IESGDDLFREVSLLGRL-RHRNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 706 iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~--------~~~~~~~~~E~~~l~~l-~Hpniv~l~~~~~~~~~~~lV~ 776 (1009)
.+.|++|.+.+++....|+.||+|++.+.... ....+++.+|+++|+++ .|+||++++++++++...|+||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 56777787777777667889999999654211 12234567999999999 7999999999999999999999
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceeccc
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLH 856 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~ 856 (1009)
||++|++|.+++..... ++.. +|+.||+.||+|+|++ |||||||||+|||++++|++||+|||+|+....
T Consensus 322 Eyv~G~~L~d~i~~~~~----l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGEE----IDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp ECCCSEEHHHHHHTTCC----CCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred ecCCCCcHHHHHHhCCC----CCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 99999999999976532 4443 4899999999999999 999999999999999999999999999987755
Q ss_pred CCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCC
Q 037197 857 KNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKM 902 (1009)
Q Consensus 857 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~ 902 (1009)
........+||+.|+|||++.+ .+..++|+||+|++++++.++..
T Consensus 392 ~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~ 436 (569)
T 4azs_A 392 DCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWS 436 (569)
T ss_dssp --CCSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred CCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccc
Confidence 5555566789999999999765 46778999999999888766543
No 319
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=2.4e-26 Score=274.56 Aligned_cols=269 Identities=24% Similarity=0.322 Sum_probs=197.2
Q ss_pred cchhhhhcccccccccCCccccCCCCccEEEeccCccccccCcccCCCCCCcEEEcccCCcCCCCCcccccccccccccc
Q 037197 210 SSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDL 289 (1009)
Q Consensus 210 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 289 (1009)
.++++|++++|.++ .+|..+. ++|++|+|++|.++ .+|. .+++|++|+|++|++++ +|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEEC
Confidence 35899999999999 7787765 79999999999998 4555 57899999999999994 665 6799999999
Q ss_pred cccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCcccccc
Q 037197 290 SDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGE 369 (1009)
Q Consensus 290 s~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~ 369 (1009)
++|++++ +|. .+++|+.|++++|+++++ |.. +++|++|++++|.+++. |. ...+|+.|++++|.+++
T Consensus 109 s~N~l~~-l~~---~l~~L~~L~L~~N~l~~l-p~~---l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~- 175 (622)
T 3g06_A 109 FSNPLTH-LPA---LPSGLCKLWIFGNQLTSL-PVL---PPGLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLTS- 175 (622)
T ss_dssp CSCCCCC-CCC---CCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC-
T ss_pred cCCcCCC-CCC---CCCCcCEEECCCCCCCcC-CCC---CCCCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCCC-
Confidence 9999995 444 578999999999999975 443 48999999999999864 32 34678889999998884
Q ss_pred CCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCC
Q 037197 370 IPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLS 449 (1009)
Q Consensus 370 ~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 449 (1009)
+| ..+++|+.|++++|++++ +|.. .++|+.|++++|.++ .+|.. +
T Consensus 176 l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-------------------------~l~~~---~ 220 (622)
T 3g06_A 176 LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-------------------------SLPAL---P 220 (622)
T ss_dssp CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-------------------------SCCCC---C
T ss_pred Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc-------------------------ccCCC---C
Confidence 44 334566777777776663 2221 244555555555554 22221 2
Q ss_pred CCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeee
Q 037197 450 TSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNL 529 (1009)
Q Consensus 450 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~L 529 (1009)
++|+.|+|++|+|+++ | ..+++|+.|++++|+|+. +|. .+++|+.|+|++|+|+ .+|..|.++++|+.|+|
T Consensus 221 ~~L~~L~Ls~N~L~~l-p---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTSL-P---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSCC-C---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCcC-C---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 4455555555555542 2 234556666666666653 343 4577888899999888 67888888999999999
Q ss_pred cCcccccCCCccccccc
Q 037197 530 RNNRFSGEIPKAVATMP 546 (1009)
Q Consensus 530 s~N~l~~~~p~~~~~l~ 546 (1009)
++|.+++.+|..+..++
T Consensus 292 ~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 292 EGNPLSERTLQALREIT 308 (622)
T ss_dssp CSCCCCHHHHHHHHHHH
T ss_pred cCCCCCCcCHHHHHhcc
Confidence 99999988888877766
No 320
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.2e-26 Score=250.57 Aligned_cols=216 Identities=22% Similarity=0.282 Sum_probs=132.5
Q ss_pred CCceeeeEEeCCCCceeEEeccccccccccccccccCCCCCeEecccCcccccCCccccccCccCcccccccccCCCCCC
Q 037197 53 LHCNWTGVWCNSRGFVEKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPT 132 (1009)
Q Consensus 53 ~~C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~ 132 (1009)
++|.|.|+.|+-.+.++.+++++++++. +|..+. ++|++|+|++|.+++..+..+.++++|++|+|++|.++...+.
T Consensus 3 ~~C~~~~~~C~c~~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~ 79 (270)
T 2o6q_A 3 ALCKKDGGVCSCNNNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAG 79 (270)
T ss_dssp CCBGGGTCSBEEETTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTT
T ss_pred ccCCCCCCCCEeCCCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChh
Confidence 6899999999766667789999988874 454443 4567777777777665555666677777777776666644444
Q ss_pred CCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCCcCCccccCccccceeeeccccccccCCccCCCCcch
Q 037197 133 GLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSL 212 (1009)
Q Consensus 133 ~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 212 (1009)
.+..+++|++|+|++|++++..+..+.++++|++|++++|.+++..+..|.++++|++|+|++|.+++..+..|+.+++|
T Consensus 80 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 159 (270)
T 2o6q_A 80 IFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSL 159 (270)
T ss_dssp TTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred hhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCccc
Confidence 45666666666666666665545555666666666666666665555555566666666666666654444445555555
Q ss_pred hhhhcccccccccCCccccCCCCccEEEeccCccccccCcccCCCCCCcEEEcccCCcC
Q 037197 213 ETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFT 271 (1009)
Q Consensus 213 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 271 (1009)
++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 160 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 160 KELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp CEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 55555555555444444555555555555555555444444555555555555555544
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.4e-27 Score=279.94 Aligned_cols=236 Identities=24% Similarity=0.270 Sum_probs=137.7
Q ss_pred ccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccCCcCccCCCCCceee
Q 037197 305 LKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLI 384 (1009)
Q Consensus 305 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 384 (1009)
+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| +..+++|+.|+|++|.+++..+ .++|+.|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEE
Confidence 3478888888888887777777778888888777777766554 6666666666666666653221 24455555
Q ss_pred cccccccccCCcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccc
Q 037197 385 LFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLES 464 (1009)
Q Consensus 385 l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 464 (1009)
+++|.+++..+.. +++ |+.|+|++|++++..|..++.+++|+.|+|++|.+++
T Consensus 106 L~~N~l~~~~~~~---l~~------------------------L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 158 (487)
T 3oja_A 106 AANNNISRVSCSR---GQG------------------------KKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDT 158 (487)
T ss_dssp CCSSCCCCEEECC---CSS------------------------CEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCE
T ss_pred CcCCcCCCCCccc---cCC------------------------CCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCC
Confidence 5555554433321 233 4444444444444444444444444444444444444
Q ss_pred cCCCccc-CCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccc
Q 037197 465 YLPSSIL-SIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVA 543 (1009)
Q Consensus 465 ~~~~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 543 (1009)
..|..+. .+++|+.|++++|.+++.. .+..+++|+.|||++|+|++.+ ..+..+++|+.|+|++|+|++ +|..+.
T Consensus 159 ~~~~~l~~~l~~L~~L~Ls~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~~~-~~~~~l~~L~~L~Ls~N~l~~-lp~~l~ 234 (487)
T 3oja_A 159 VNFAELAASSDTLEHLNLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAFMG-PEFQSAAGVTWISLRNNKLVL-IEKALR 234 (487)
T ss_dssp EEGGGGGGGTTTCCEEECTTSCCCEEE--CCCCCTTCCEEECCSSCCCEEC-GGGGGGTTCSEEECTTSCCCE-ECTTCC
T ss_pred cChHHHhhhCCcccEEecCCCcccccc--ccccCCCCCEEECCCCCCCCCC-HhHcCCCCccEEEecCCcCcc-cchhhc
Confidence 4443333 3444444444444444331 1223566677777777776433 336667777777777777763 566667
Q ss_pred cccccceecCCccccc-cccCcCcCCCCCCcEEecC
Q 037197 544 TMPTLAILDMSNNSLF-GRIPENFGASPALEMLNLS 578 (1009)
Q Consensus 544 ~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~ls 578 (1009)
.+++|+.|++++|++. +.+|..+..++.|+.++++
T Consensus 235 ~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 235 FSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 7777777777777776 5666666666666666664
No 322
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=1.4e-29 Score=306.96 Aligned_cols=390 Identities=17% Similarity=0.179 Sum_probs=178.2
Q ss_pred cccceeeeccccccccCCccCC-CCcchhhhhcccc-ccccc-CCccccCCCCccEEEeccCccccccCccc----CCCC
Q 037197 186 QKLKFLGLSGNNLTGKIPPELG-QLSSLETIILGYN-AFEGE-IPAEFGNLTNLRYLDLAVGSLSGQIPPAL----GRLK 258 (1009)
Q Consensus 186 ~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~l----~~l~ 258 (1009)
++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 3444444444444333333332 3344444444444 22221 12222344445555555444443322222 2344
Q ss_pred CCcEEEcccCC--cCCC-CCccccccccccccccccc-ccCCCcchhhhcccCCCeEeccc-------cccCCCCCcCCC
Q 037197 259 KLTTVYLYKNN--FTGK-IPPELGSITSLAFLDLSDN-QISGEIPVKLAELKNLQLLNLMC-------NQLTGLIPDKLG 327 (1009)
Q Consensus 259 ~L~~L~L~~n~--l~~~-~~~~~~~l~~L~~L~Ls~N-~l~~~~~~~l~~l~~L~~L~L~~-------N~l~~~~~~~l~ 327 (1009)
+|++|++++|. ++.. ++..+..+++|++|+|++| .+.+ ++..+..+++|++|+++. |.+.+. +..+.
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l-~~~l~ 262 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGL-SVALS 262 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHH-HHHHH
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHH-HHHHh
Confidence 55555555554 1100 0011122355555555555 2332 444555555555555332 222322 22345
Q ss_pred CCCcccEE-EccCCccCccCCccccCCCCCceeeccCccccccCCc-CccCCCCCceeeccccccccc-CCcccccCccc
Q 037197 328 ELTKLEVL-ELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPT-GLCDSGNLTKLILFNNSFSGT-FPVSLSTCKSL 404 (1009)
Q Consensus 328 ~l~~L~~L-~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~-~l~~l~~L~~L~l~~N~l~~~-~p~~l~~~~~L 404 (1009)
++++|+.| .+.+.. .+.++..+..+++|+.|++++|.+++.... .+..+++|+.|++++| ++.. ++.....+++|
T Consensus 263 ~~~~L~~Ls~~~~~~-~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L 340 (594)
T 2p1m_B 263 GCKELRCLSGFWDAV-PAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDL 340 (594)
T ss_dssp TCTTCCEEECCBTCC-GGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTC
T ss_pred cCCCcccccCCcccc-hhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCC
Confidence 55555555 222221 122333333455566666666655432221 2334566666666665 3221 22222346666
Q ss_pred cEEEcc---------cCccccccCCccC-CCCcccEEEeecccccccCCcCCc-CCCCCcEEecc--c----CcccccC-
Q 037197 405 VRVRVQ---------NNLISGTIPVGLG-NLPSLQRLEMANNNLTGQIPDDIS-LSTSLSFVDIS--W----NHLESYL- 466 (1009)
Q Consensus 405 ~~L~L~---------~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~~~- 466 (1009)
++|++. .+.+++.....+. .+++|+.|.++.|++++..+..+. .+++|+.|+++ + |++++..
T Consensus 341 ~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~ 420 (594)
T 2p1m_B 341 RELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPL 420 (594)
T ss_dssp CEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCT
T ss_pred CEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCch
Confidence 666662 3444433222222 356677776666666654444443 35667777776 3 4444211
Q ss_pred ----CCcccCCcccchhccccCcccCCccccccc-CCcCcEEEeecCCCCCCCCccc-cccccceeeeecCcccccCCCc
Q 037197 467 ----PSSILSIPSLQTFMASHNNLQAKIPNELQA-CPSLSVLDLSSNSLSGEIPASI-ASCEKLVSLNLRNNRFSGEIPK 540 (1009)
Q Consensus 467 ----~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-l~~L~~LdLs~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~ 540 (1009)
+..+..+++|+.|++++ ++++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++..+.
T Consensus 421 ~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~ 499 (594)
T 2p1m_B 421 DIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALL 499 (594)
T ss_dssp HHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHH
T ss_pred hhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHH
Confidence 11133455566666654 444433333433 5666666666666654444333 4456666666666666443333
Q ss_pred -ccccccccceecCCccccccccCcCc-CCCCCCcEEecCCC
Q 037197 541 -AVATMPTLAILDMSNNSLFGRIPENF-GASPALEMLNLSYN 580 (1009)
Q Consensus 541 -~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~ls~N 580 (1009)
.+..+++|+.|++++|+++......+ ..++.|+...+..+
T Consensus 500 ~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~ 541 (594)
T 2p1m_B 500 ANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDER 541 (594)
T ss_dssp HTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSS
T ss_pred HHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCC
Confidence 23345666666666666643333333 33455544444443
No 323
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=3.2e-27 Score=276.89 Aligned_cols=239 Identities=22% Similarity=0.225 Sum_probs=193.5
Q ss_pred cccccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCcee
Q 037197 280 SITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRL 359 (1009)
Q Consensus 280 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L 359 (1009)
.+++|+.|+|++|.+++..|..|..+++|++|+|++|.+++.+| +..+++|++|+|++|.+++..+ .++|+.|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 44589999999999999888999999999999999999998765 8999999999999999986543 3789999
Q ss_pred eccCccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCccccccCCccC-CCCcccEEEeecccc
Q 037197 360 DASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLG-NLPSLQRLEMANNNL 438 (1009)
Q Consensus 360 ~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l 438 (1009)
++++|.+++..+.. +++|+.|++++|.+++..|..+.++++|+.|+|++|.+++.+|..+. .+++|+.|+|++|.|
T Consensus 105 ~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 99999999776654 57899999999999988888888888888888888888877777765 677788888887777
Q ss_pred cccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccc
Q 037197 439 TGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASI 518 (1009)
Q Consensus 439 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~ 518 (1009)
++..+ ...+++|+.|+|++|+|++ . |..+..+++|+.|||++|.|++ +|..+
T Consensus 182 ~~~~~--~~~l~~L~~L~Ls~N~l~~------------------------~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l 233 (487)
T 3oja_A 182 YDVKG--QVVFAKLKTLDLSSNKLAF------------------------M-GPEFQSAAGVTWISLRNNKLVL-IEKAL 233 (487)
T ss_dssp CEEEC--CCCCTTCCEEECCSSCCCE------------------------E-CGGGGGGTTCSEEECTTSCCCE-ECTTC
T ss_pred ccccc--cccCCCCCEEECCCCCCCC------------------------C-CHhHcCCCCccEEEecCCcCcc-cchhh
Confidence 75422 2234555555555555544 2 2336677788888888888884 67778
Q ss_pred cccccceeeeecCcccc-cCCCcccccccccceecCCcc
Q 037197 519 ASCEKLVSLNLRNNRFS-GEIPKAVATMPTLAILDMSNN 556 (1009)
Q Consensus 519 ~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N 556 (1009)
..+++|+.|+|++|.+. +.+|..+..++.|+.|+++.+
T Consensus 234 ~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~~~ 272 (487)
T 3oja_A 234 RFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTV 272 (487)
T ss_dssp CCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecccc
Confidence 88888899999999887 778888899999999988743
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.5e-25 Score=242.99 Aligned_cols=227 Identities=20% Similarity=0.139 Sum_probs=189.2
Q ss_pred eeccCccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccc
Q 037197 359 LDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNL 438 (1009)
Q Consensus 359 L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 438 (1009)
++.++..+. .+|..+. ++|++|++++|++++..+..+.++++|++|++++|++++..+..|.++++|++|+|++|++
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 88 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCcc
Confidence 444445554 4555443 4678888888888877777788888888888888888877777888888888888888888
Q ss_pred cccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCC-cccccccCCcCcEEEeecCCCCCCCCcc
Q 037197 439 TGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAK-IPNELQACPSLSVLDLSSNSLSGEIPAS 517 (1009)
Q Consensus 439 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~LdLs~N~l~~~~p~~ 517 (1009)
++..+..+..+++|+.|++++|++++..+..+..+++|++|++++|++++. +|..+..+++|+.|+|++|++++..+..
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 168 (276)
T 2z62_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168 (276)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHH
Confidence 877778888888899999999988888777888899999999999998874 5889999999999999999999888888
Q ss_pred ccccccce----eeeecCcccccCCCcccccccccceecCCccccccccCcCcCCCCCCcEEecCCCccccCCCCC
Q 037197 518 IASCEKLV----SLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEGPVPSN 589 (1009)
Q Consensus 518 ~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~ 589 (1009)
+..+.+|+ .|+|++|++++..+..+. ..+|+.|+|++|++++..+..|..+++|+.|+|++|++++..|.-
T Consensus 169 ~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 169 LRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp GHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred hhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 98888888 899999999965555554 458999999999999888888899999999999999999988753
No 325
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=3.6e-29 Score=303.26 Aligned_cols=432 Identities=16% Similarity=0.147 Sum_probs=248.5
Q ss_pred ccccccCccCcccccccccCCC---CCCCC------------CCCcCCeEEecCCCCCCCCCCcccc-CCCCCCeeeccC
Q 037197 108 KSLANLTALKSMDVSQNNFIGS---FPTGL------------GKASGLTSVNASSNNFSGFLPEDLG-NATSLESLDFRG 171 (1009)
Q Consensus 108 ~~l~~l~~L~~L~Ls~n~l~~~---~p~~l------------~~l~~L~~L~Ls~n~l~~~~p~~l~-~l~~L~~L~L~~ 171 (1009)
..+..+++|++|+|++|..... .|..+ ..+++|++|+|++|.+++..+..+. .+++|++|+|++
T Consensus 60 ~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~ 139 (594)
T 2p1m_B 60 TVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSS 139 (594)
T ss_dssp HHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEES
T ss_pred HHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCC
Confidence 3467889999999999764321 22221 2456778888887777766666665 577778888777
Q ss_pred C-ccCCc-CCccccCccccceeeeccccccccCCccCC----CCcchhhhhccccc--cccc-CCccccCCCCccEEEec
Q 037197 172 S-FFEGS-VPTSFRNLQKLKFLGLSGNNLTGKIPPELG----QLSSLETIILGYNA--FEGE-IPAEFGNLTNLRYLDLA 242 (1009)
Q Consensus 172 n-~~~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~----~l~~L~~L~L~~n~--l~~~-~~~~~~~l~~L~~L~L~ 242 (1009)
| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++|++|++++|. ++.. ++..+.++++|++|+++
T Consensus 140 ~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~ 219 (594)
T 2p1m_B 140 CEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLN 219 (594)
T ss_dssp CEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECC
T ss_pred cCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecC
Confidence 7 44432 333344677777777777776654443332 45577777777765 2211 11122345677777777
Q ss_pred cCccccccCcccCCCCCCcEEEcccCC-------cCCCCCcccccccccccc-cccccccCCCcchhhhcccCCCeEecc
Q 037197 243 VGSLSGQIPPALGRLKKLTTVYLYKNN-------FTGKIPPELGSITSLAFL-DLSDNQISGEIPVKLAELKNLQLLNLM 314 (1009)
Q Consensus 243 ~n~l~~~~~~~l~~l~~L~~L~L~~n~-------l~~~~~~~~~~l~~L~~L-~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 314 (1009)
+|.-.+.++..+..+++|++|+++.+. +.+ ++..+.++++|+.| .+.+... +.++..+..+++|++|+++
T Consensus 220 ~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~ 297 (594)
T 2p1m_B 220 RAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLS 297 (594)
T ss_dssp TTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECT
T ss_pred CCCcHHHHHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEcc
Confidence 663222355566666777777654432 221 22234445555555 2322221 1233333445555555555
Q ss_pred ccccCCCCC-cCCCCCCcccEEEccCCccCcc-CCccccCCCCCceeeccCccccccCCcCccCCCCCceeecccccccc
Q 037197 315 CNQLTGLIP-DKLGELTKLEVLELWKNSLIGS-LPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSG 392 (1009)
Q Consensus 315 ~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~-~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~ 392 (1009)
+|.+++... ..+..+++|+.|++++| +.+. ++.....+++|+.|+++++.-.| ....+.+++
T Consensus 298 ~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g---------------~~~~~~l~~ 361 (594)
T 2p1m_B 298 YATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFV---------------MEPNVALTE 361 (594)
T ss_dssp TCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTC---------------SSCSSCCCH
T ss_pred CCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccc---------------cccCCCCCH
Confidence 555442211 11334455555555544 2211 11111123344444442211000 002234443
Q ss_pred cCCcccc-cCccccEEEcccCccccccCCccC-CCCcccEEEee--c----cccccc-----CCcCCcCCCCCcEEeccc
Q 037197 393 TFPVSLS-TCKSLVRVRVQNNLISGTIPVGLG-NLPSLQRLEMA--N----NNLTGQ-----IPDDISLSTSLSFVDISW 459 (1009)
Q Consensus 393 ~~p~~l~-~~~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~--~----N~l~~~-----~p~~~~~l~~L~~L~Ls~ 459 (1009)
.....+. ++++|+.|.+..|.+++..+..+. .+++|+.|+++ + |++++. ++..+..+++|+.|+|++
T Consensus 362 ~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~ 441 (594)
T 2p1m_B 362 QGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG 441 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS
T ss_pred HHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC
Confidence 2222232 467788887777777765555554 47788888888 3 455421 112255677888888877
Q ss_pred CcccccCCCcccC-CcccchhccccCcccCCccccc-ccCCcCcEEEeecCCCCCCCCc-cccccccceeeeecCccccc
Q 037197 460 NHLESYLPSSILS-IPSLQTFMASHNNLQAKIPNEL-QACPSLSVLDLSSNSLSGEIPA-SIASCEKLVSLNLRNNRFSG 536 (1009)
Q Consensus 460 N~l~~~~~~~~~~-l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~LdLs~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~ 536 (1009)
.+++..+..+.. +++|+.|++++|.+++..+..+ ..+++|+.|+|++|.+++..+. .+..+++|+.|+|++|+++.
T Consensus 442 -~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 442 -LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp -SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBH
T ss_pred -cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCH
Confidence 666554444544 7888999999998876555555 6789999999999999755444 34568999999999999975
Q ss_pred CCCccc-ccccccceecCCcccc
Q 037197 537 EIPKAV-ATMPTLAILDMSNNSL 558 (1009)
Q Consensus 537 ~~p~~~-~~l~~L~~L~Ls~N~l 558 (1009)
.....+ ..++.|+...+..+.-
T Consensus 521 ~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 521 GACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp HHHHHHHHHCTTEEEEEECSSSC
T ss_pred HHHHHHHHhCCCCEEEEecCCCc
Confidence 544555 5678887777766643
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=2.3e-24 Score=233.73 Aligned_cols=203 Identities=24% Similarity=0.252 Sum_probs=99.1
Q ss_pred CCeeeccCCccCCcCCccccCccccceeeeccccccccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEecc
Q 037197 164 LESLDFRGSFFEGSVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAV 243 (1009)
Q Consensus 164 L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 243 (1009)
|++|++++|.+++..+..|.++++|++|+|++|++++..+..|+.+++|++|+|++|++++..+..|+++++|++|++++
T Consensus 30 l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~ 109 (276)
T 2z62_A 30 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVE 109 (276)
T ss_dssp CCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred ccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCC
Confidence 34444444444333333344444444444444444433333444444444444444444444444444555555555555
Q ss_pred CccccccCcccCCCCCCcEEEcccCCcCCC-CCcccccccccccccccccccCCCcchhhhcccCCC----eEecccccc
Q 037197 244 GSLSGQIPPALGRLKKLTTVYLYKNNFTGK-IPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQ----LLNLMCNQL 318 (1009)
Q Consensus 244 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~----~L~L~~N~l 318 (1009)
|.+++..+..++.+++|++|++++|.+++. +|..+..+++|++|+|++|++++..+..+..+.+|+ .|++++|++
T Consensus 110 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l 189 (276)
T 2z62_A 110 TNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPM 189 (276)
T ss_dssp SCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCC
T ss_pred CCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcc
Confidence 555444444455555555555555555442 355555555555555555555544444555555554 556666666
Q ss_pred CCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCcccc
Q 037197 319 TGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLS 367 (1009)
Q Consensus 319 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~ 367 (1009)
++..+..+.. .+|+.|++++|.+++..+..+..+++|+.|++++|.+.
T Consensus 190 ~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 190 NFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp CEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred cccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 5554444332 25555555555555444444444555555555555444
No 327
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=5.1e-24 Score=230.07 Aligned_cols=185 Identities=20% Similarity=0.199 Sum_probs=136.5
Q ss_pred cccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccc
Q 037197 403 SLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMAS 482 (1009)
Q Consensus 403 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~ 482 (1009)
++++|++++|++++..+..|.++++|++|+|++|++++..+..+..+++|++|+|++|+++++.+..|..+++|+.|+++
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 45555555555554444556666666666666666664444445666666666666666666666666677777777777
Q ss_pred cCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCcccccccc
Q 037197 483 HNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRI 562 (1009)
Q Consensus 483 ~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 562 (1009)
+|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 197 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVP 197 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCC
Confidence 77777666677788888888888888888777777888888888888888888776777888889999999999998877
Q ss_pred CcCcCCCCCCcEEecCCCccccCCC
Q 037197 563 PENFGASPALEMLNLSYNKLEGPVP 587 (1009)
Q Consensus 563 p~~~~~l~~L~~L~ls~N~l~g~ip 587 (1009)
+..|..++.|+.|+|++|++.+..+
T Consensus 198 ~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 198 EGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred HHHhccccCCCEEEecCCCeeCCCc
Confidence 7788888999999999988876543
No 328
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.7e-24 Score=233.90 Aligned_cols=207 Identities=19% Similarity=0.257 Sum_probs=102.8
Q ss_pred cccCCCCCeEecccCcccccCCccccccCccCcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCC
Q 037197 86 IRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLE 165 (1009)
Q Consensus 86 l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~ 165 (1009)
+..+++|++|++++|.++. .+.+..+++|++|+|++|.+.+. ..++.+++|++|+|++|++++..+..++++++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~--~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKS--VQGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCCC--CTTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCccc--ccccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 4455555555555555532 12355555555555555555431 2455555555555555555544444455555555
Q ss_pred eeeccCCccCCcCCccccCccccceeeeccccccccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEeccCc
Q 037197 166 SLDFRGSFFEGSVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGS 245 (1009)
Q Consensus 166 ~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 245 (1009)
+|++++|.+++..+..|+++++|++|+|++|++++..+..++.+++|++|++++|++++..+..|+++++|++|++++|+
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 55555555554444445555555555555555554444444455555555555555554444444455555555555555
Q ss_pred cccccCcccCCCCCCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhh
Q 037197 246 LSGQIPPALGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLA 303 (1009)
Q Consensus 246 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 303 (1009)
+++..+..++.+++|+.|+|++|.+.+. +++|+.|+++.|.++|.+|.+++
T Consensus 193 l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~ 243 (272)
T 3rfs_A 193 LKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAG 243 (272)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTS
T ss_pred CCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccc
Confidence 5544444444455555555555544422 22344444444444444444443
No 329
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=9.8e-25 Score=235.86 Aligned_cols=180 Identities=20% Similarity=0.186 Sum_probs=99.2
Q ss_pred cCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchh
Q 037197 400 TCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTF 479 (1009)
Q Consensus 400 ~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 479 (1009)
.+++|++|++++|.+++. ..+..+++|++|+|++|++++..+..+..+++|+.|++++|++++..+..|..+++|+.|
T Consensus 61 ~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 138 (272)
T 3rfs_A 61 YLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYL 138 (272)
T ss_dssp GCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEE
Confidence 333444444444444321 134444444444444444444444444444555555555555554444445555555555
Q ss_pred ccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCccccc
Q 037197 480 MASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLF 559 (1009)
Q Consensus 480 ~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 559 (1009)
++++|++++..+..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..+..+++|+.|+|++|++.
T Consensus 139 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (272)
T 3rfs_A 139 NLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 218 (272)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcc
Confidence 55555555444445556666666666666666555555666666666666666666655555666666666666666665
Q ss_pred cccCcCcCCCCCCcEEecCCCccccCCCC
Q 037197 560 GRIPENFGASPALEMLNLSYNKLEGPVPS 588 (1009)
Q Consensus 560 ~~~p~~~~~l~~L~~L~ls~N~l~g~ip~ 588 (1009)
+.. +.|+.|+++.|+++|.||.
T Consensus 219 ~~~-------~~l~~l~~~~n~~~g~ip~ 240 (272)
T 3rfs_A 219 CTC-------PGIRYLSEWINKHSGVVRN 240 (272)
T ss_dssp CCT-------TTTHHHHHHHHHTGGGBBC
T ss_pred ccC-------cHHHHHHHHHHhCCCcccC
Confidence 443 3466666666777776665
No 330
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=1.7e-26 Score=258.43 Aligned_cols=266 Identities=19% Similarity=0.242 Sum_probs=174.7
Q ss_pred CCceeeeEEeCCCCceeEEeccccccccccccccccC--CCCCeEecccCcccccCCccccccCccCcccccccccCCC-
Q 037197 53 LHCNWTGVWCNSRGFVEKLDLSNMSLNGSVSENIRGL--RSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGS- 129 (1009)
Q Consensus 53 ~~C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~l~~l--~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~- 129 (1009)
.|.+|.++.|+ ...++.+|++++.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+.+.
T Consensus 35 vc~~W~~~~~~-~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~ 109 (336)
T 2ast_B 35 VCKRWYRLASD-ESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVST 109 (336)
T ss_dssp SCHHHHHHHTC-STTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHH
T ss_pred HHHHHHHHhcC-chhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHH
Confidence 46689999986 345788899888776 3455666 7788888888887766554 55677788888887777655
Q ss_pred CCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCC-ccCCc-CCccccCccccceeeeccc-ccccc-CCcc
Q 037197 130 FPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGS-FFEGS-VPTSFRNLQKLKFLGLSGN-NLTGK-IPPE 205 (1009)
Q Consensus 130 ~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n-~~~~~-~p~~~~~l~~L~~L~L~~n-~l~~~-~p~~ 205 (1009)
+|..+..+++|++|+|++|.+++..|..++.+++|++|++++| .+++. ++..+.++++|++|++++| .+++. ++..
T Consensus 110 ~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~ 189 (336)
T 2ast_B 110 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVA 189 (336)
T ss_dssp HHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHH
T ss_pred HHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHH
Confidence 6666777777777777777777667777777777777777777 56542 4555667777777777777 77643 4555
Q ss_pred CCCCc-chhhhhcccc--ccc-ccCCccccCCCCccEEEeccCc-cccccCcccCCCCCCcEEEcccCC-cCCCCCcccc
Q 037197 206 LGQLS-SLETIILGYN--AFE-GEIPAEFGNLTNLRYLDLAVGS-LSGQIPPALGRLKKLTTVYLYKNN-FTGKIPPELG 279 (1009)
Q Consensus 206 l~~l~-~L~~L~L~~n--~l~-~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~~~ 279 (1009)
+..++ +|++|+|++| .++ +.++..+.++++|++|++++|. +++..+..++++++|++|++++|. ++......+.
T Consensus 190 ~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~ 269 (336)
T 2ast_B 190 VAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELG 269 (336)
T ss_dssp HHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGG
T ss_pred HHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHh
Confidence 66666 7777777777 344 3455566667777777777776 555566666666777777777664 2222222455
Q ss_pred cccccccccccccccCCCcchhhhcc-cCCCeEeccccccCCCCCcCCC
Q 037197 280 SITSLAFLDLSDNQISGEIPVKLAEL-KNLQLLNLMCNQLTGLIPDKLG 327 (1009)
Q Consensus 280 ~l~~L~~L~Ls~N~l~~~~~~~l~~l-~~L~~L~L~~N~l~~~~~~~l~ 327 (1009)
.+++|+.|++++| ++.. .+..+ .+|+.|++++|++++..|..++
T Consensus 270 ~~~~L~~L~l~~~-i~~~---~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 270 EIPTLKTLQVFGI-VPDG---TLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp GCTTCCEEECTTS-SCTT---CHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred cCCCCCEEeccCc-cCHH---HHHHHHhhCcceEEecccCccccCCccc
Confidence 6666666666666 3321 22333 2355555666666666555544
No 331
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=2e-23 Score=227.35 Aligned_cols=203 Identities=24% Similarity=0.270 Sum_probs=110.6
Q ss_pred cCCCCCceeeccCccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCccccccCCccCCCCcccE
Q 037197 351 GQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQR 430 (1009)
Q Consensus 351 ~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 430 (1009)
..+++++.+++++|.++ .+|..+. ++++.|++++|.+++..+..+..+++|+.|++++|.+++..+. +.+++|++
T Consensus 7 ~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~ 81 (290)
T 1p9a_G 7 SKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGT 81 (290)
T ss_dssp ECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCE
T ss_pred cccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCE
Confidence 34445555555555555 3343332 3555666666666555555555556666666666655533221 45555555
Q ss_pred EEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCC
Q 037197 431 LEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSL 510 (1009)
Q Consensus 431 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l 510 (1009)
|+|++|+|+ .+|..+..+++|+.|++++|+|+++ .|..|..+++|+.|+|++|+|
T Consensus 82 L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l------------------------~~~~~~~l~~L~~L~L~~N~l 136 (290)
T 1p9a_G 82 LDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSL------------------------PLGALRGLGELQELYLKGNEL 136 (290)
T ss_dssp EECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCC------------------------CSSTTTTCTTCCEEECTTSCC
T ss_pred EECCCCcCC-cCchhhccCCCCCEEECCCCcCccc------------------------CHHHHcCCCCCCEEECCCCCC
Confidence 555555555 4444444455555555555555444 344455555555555555555
Q ss_pred CCCCCccccccccceeeeecCcccccCCCcccccccccceecCCccccccccCcCcCCCCCCcEEecCCCcccc
Q 037197 511 SGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEG 584 (1009)
Q Consensus 511 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g 584 (1009)
++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+...+.|+.|+|++|++..
T Consensus 137 ~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 137 KTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 5555555555556666666666665444444555666666666666665 455555555666666666666654
No 332
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=2e-23 Score=227.41 Aligned_cols=205 Identities=25% Similarity=0.266 Sum_probs=161.4
Q ss_pred cccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccc
Q 037197 398 LSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQ 477 (1009)
Q Consensus 398 l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 477 (1009)
+.++++++++++++|.++ .+|..+. ++++.|+|++|++++..|..+..+++|+.|+|++|+|+++.+. ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 345556666666666666 4444443 4667777777777766666677777777777777777765443 5677888
Q ss_pred hhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCccc
Q 037197 478 TFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNS 557 (1009)
Q Consensus 478 ~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 557 (1009)
.|++++|+++ .+|..+..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 8888888887 567788899999999999999998888999999999999999999998878889999999999999999
Q ss_pred cccccCcCcCCCCCCcEEecCCCccccCCCCC-CcccccCCcccccCcCCCCC
Q 037197 558 LFGRIPENFGASPALEMLNLSYNKLEGPVPSN-GILMNINPNELIGNAGLCGS 609 (1009)
Q Consensus 558 l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~lcg~ 609 (1009)
|++..+..|..+++|+.|+|++|+|+. +|.+ .....+....+.+||+.|.+
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~~-ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCCc-cChhhcccccCCeEEeCCCCccCcC
Confidence 998888888999999999999999994 5543 33344555567899999974
No 333
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=1e-25 Score=254.47 Aligned_cols=255 Identities=18% Similarity=0.201 Sum_probs=125.6
Q ss_pred EecccCcccccCCccccccCccCcccccccccCCCCC----CCCCCCc-CCeEEecCCCCCCCCCCccccCC-----CCC
Q 037197 95 LNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFP----TGLGKAS-GLTSVNASSNNFSGFLPEDLGNA-----TSL 164 (1009)
Q Consensus 95 L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p----~~l~~l~-~L~~L~Ls~n~l~~~~p~~l~~l-----~~L 164 (1009)
++|+.|.+++.+|..+...++|++|||++|.+++..+ ..+..++ +|++|+|++|++++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4566677766666666666667777777776665544 4455555 56666666666665555555543 566
Q ss_pred CeeeccCCccCCcCCccccC----c-cccceeeeccccccccCCccCC----C-CcchhhhhcccccccccCCccccCCC
Q 037197 165 ESLDFRGSFFEGSVPTSFRN----L-QKLKFLGLSGNNLTGKIPPELG----Q-LSSLETIILGYNAFEGEIPAEFGNLT 234 (1009)
Q Consensus 165 ~~L~L~~n~~~~~~p~~~~~----l-~~L~~L~L~~n~l~~~~p~~l~----~-l~~L~~L~L~~n~l~~~~~~~~~~l~ 234 (1009)
++|+|++|.+++..+..+.. + ++|++|+|++|.+++..+..++ . .++|++|+|++|++++..+..
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~----- 157 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDE----- 157 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHH-----
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHH-----
Confidence 66666666665544443322 2 5566666666655544333222 1 134444444444444322221
Q ss_pred CccEEEeccCccccccCcccCCCC-CCcEEEcccCCcCCCCCcccccc-----cccccccccccccCCC----cchhhhc
Q 037197 235 NLRYLDLAVGSLSGQIPPALGRLK-KLTTVYLYKNNFTGKIPPELGSI-----TSLAFLDLSDNQISGE----IPVKLAE 304 (1009)
Q Consensus 235 ~L~~L~L~~n~l~~~~~~~l~~l~-~L~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~----~~~~l~~ 304 (1009)
++..+..++ +|++|+|++|++++..+..+... ++|++|+|++|.|++. ++..+..
T Consensus 158 ---------------l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~ 222 (362)
T 3goz_A 158 ---------------LIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSS 222 (362)
T ss_dssp ---------------HHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHH
T ss_pred ---------------HHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhc
Confidence 112222232 45555555555544433322222 3555555555555432 2223333
Q ss_pred -ccCCCeEeccccccCCCCC----cCCCCCCcccEEEccCCccCccC-------CccccCCCCCceeeccCcccccc
Q 037197 305 -LKNLQLLNLMCNQLTGLIP----DKLGELTKLEVLELWKNSLIGSL-------PMRLGQSSPLRRLDASSNLLSGE 369 (1009)
Q Consensus 305 -l~~L~~L~L~~N~l~~~~~----~~l~~l~~L~~L~L~~N~l~~~~-------~~~~~~~~~L~~L~Ls~N~l~~~ 369 (1009)
.++|++|+|++|++++..+ ..+..+++|+.|++++|.+.+.. +..+..++.|+.||+++|.+.+.
T Consensus 223 ~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 223 IPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp SCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred CCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 2355555555555554332 22344555555555555533221 22334444455555555555433
No 334
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=1.3e-24 Score=256.58 Aligned_cols=186 Identities=17% Similarity=0.212 Sum_probs=144.3
Q ss_pred CcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChh------hHHHHHHHHHHHhccCCCceeeEEeEEEcCCeEEE
Q 037197 701 KESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIE------SGDDLFREVSLLGRLRHRNIVRLLGYLHNETNVMM 774 (1009)
Q Consensus 701 ~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~E~~~l~~l~Hpniv~l~~~~~~~~~~~l 774 (1009)
...+.||+|+||.||+|... ++.+++|+......... ..+++.+|++++++++||||+++..++...+..++
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 416 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYL--DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI 416 (540)
T ss_dssp ---------CCEEEEEEECS--SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred CCCCEEeeCCCEEEEEEEEC--CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence 44678999999999999544 57788887644322111 13446799999999999999966666667777899
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceec
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMM 854 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~ 854 (1009)
||||+++++|.++++. +..++.|+++||+|||++ +|+||||||+||+++. .+||+|||+++..
T Consensus 417 VmE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 417 MMSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp EEECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred EEECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEEC
Confidence 9999999999999965 346899999999999999 9999999999999998 9999999999987
Q ss_pred ccCCCc-------eeeecccCcccCCcccCC--CCCCcccchHhHHHHHHHHHhCCCCCC
Q 037197 855 LHKNET-------VSMVAGSYGYIAPEYGYT--LKVDEKSDIYSFGVVLLELLTGKMPLD 905 (1009)
Q Consensus 855 ~~~~~~-------~~~~~gt~~y~aPE~~~~--~~~~~~sDv~SlGvvl~elltg~~Pf~ 905 (1009)
...... .....||+.|+|||++.. ..|+.++|+|+..+-..+-+.++.+|.
T Consensus 480 ~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 480 NLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 443221 235679999999999876 567888999999998888888776663
No 335
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=9.1e-24 Score=233.03 Aligned_cols=223 Identities=19% Similarity=0.218 Sum_probs=146.3
Q ss_pred CCCeEecccCcccccCCc---cccccCccCcccccccccCCCCCCCC--CCCcCCeEEecCCCCCCCCCC----ccccCC
Q 037197 91 SLSSLNICCNEFASSLPK---SLANLTALKSMDVSQNNFIGSFPTGL--GKASGLTSVNASSNNFSGFLP----EDLGNA 161 (1009)
Q Consensus 91 ~L~~L~L~~n~~~~~~~~---~l~~l~~L~~L~Ls~n~l~~~~p~~l--~~l~~L~~L~Ls~n~l~~~~p----~~l~~l 161 (1009)
.++.|.+..+.++..... .+..+++|++|+|++|.+.+.+|..+ +.+++|++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 467777777766542111 22345668888888888888888777 778888888888888876555 334567
Q ss_pred CCCCeeeccCCccCCcCCccccCccccceeeecccccccc--C--CccCCCCcchhhhhcccccccccCCc----cccCC
Q 037197 162 TSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLSGNNLTGK--I--PPELGQLSSLETIILGYNAFEGEIPA----EFGNL 233 (1009)
Q Consensus 162 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~--~--p~~l~~l~~L~~L~L~~n~l~~~~~~----~~~~l 233 (1009)
++|++|+|++|.+.+..|..|+++++|++|+|++|++.+. + +..++.+++|++|+|++|+++. ++. .++++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcC
Confidence 7888888888888777777778888888888888876542 2 2234677777777777777762 222 24666
Q ss_pred CCccEEEeccCccccccCcccCCC---CCCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCCCe
Q 037197 234 TNLRYLDLAVGSLSGQIPPALGRL---KKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQL 310 (1009)
Q Consensus 234 ~~L~~L~L~~n~l~~~~~~~l~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 310 (1009)
++|++|+|++|++++..|..+..+ ++|++|+|++|+++ .+|..+. ++|++|+|++|+|++. |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 777777777777776666666555 46666666666666 4455443 5566666666666532 22 344555555
Q ss_pred EeccccccC
Q 037197 311 LNLMCNQLT 319 (1009)
Q Consensus 311 L~L~~N~l~ 319 (1009)
|++++|+++
T Consensus 299 L~L~~N~l~ 307 (310)
T 4glp_A 299 LTLDGNPFL 307 (310)
T ss_dssp EECSSTTTS
T ss_pred EECcCCCCC
Confidence 555555554
No 336
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=5.6e-24 Score=234.72 Aligned_cols=200 Identities=24% Similarity=0.276 Sum_probs=148.1
Q ss_pred CCceeecccccccccCCccc--ccCccccEEEcccCccccccC----CccCCCCcccEEEeecccccccCCcCCcCCCCC
Q 037197 379 NLTKLILFNNSFSGTFPVSL--STCKSLVRVRVQNNLISGTIP----VGLGNLPSLQRLEMANNNLTGQIPDDISLSTSL 452 (1009)
Q Consensus 379 ~L~~L~l~~N~l~~~~p~~l--~~~~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 452 (1009)
+|++|++++|.+++..|..+ ..+++|++|++++|++++..+ ..+..+++|++|+|++|++++..|..+..+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 45555555555555555555 555566666666666654333 234467777777777777777677777777778
Q ss_pred cEEecccCcccc---cC-CCcccCCcccchhccccCcccCCccc----ccccCCcCcEEEeecCCCCCCCCcccccc---
Q 037197 453 SFVDISWNHLES---YL-PSSILSIPSLQTFMASHNNLQAKIPN----ELQACPSLSVLDLSSNSLSGEIPASIASC--- 521 (1009)
Q Consensus 453 ~~L~Ls~N~l~~---~~-~~~~~~l~~L~~L~l~~N~l~~~~p~----~~~~l~~L~~LdLs~N~l~~~~p~~~~~l--- 521 (1009)
++|+|++|++.+ .. +..+..+++|++|++++|+++. ++. .+..+++|+.|||++|++++..|..+..+
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 888888877654 22 2334678888888888888863 233 35788999999999999998888888776
Q ss_pred ccceeeeecCcccccCCCcccccccccceecCCccccccccCcCcCCCCCCcEEecCCCcccc
Q 037197 522 EKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEG 584 (1009)
Q Consensus 522 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g 584 (1009)
++|++|+|++|+|+ .+|..+. ++|+.|||++|+|++. |. +..++.|+.|+|++|+++.
T Consensus 251 ~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 251 SALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp TTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 69999999999999 7788775 7999999999999975 33 6778999999999999975
No 337
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=2e-23 Score=222.71 Aligned_cols=192 Identities=24% Similarity=0.295 Sum_probs=128.4
Q ss_pred CCceeeeEEeCCCCceeEEeccccccccccccccccCCCCCeEecccCcccccCCccccccCccCcccccccccCCCCCC
Q 037197 53 LHCNWTGVWCNSRGFVEKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPT 132 (1009)
Q Consensus 53 ~~C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~ 132 (1009)
.||.|.|++|.. ..+.+++++++++. +|..+ . ++|++|+|++|.+.+..+.
T Consensus 3 ~Cp~~~gC~C~~--~~~~l~~~~~~l~~-~p~~~------------------------~--~~l~~L~L~~n~l~~~~~~ 53 (251)
T 3m19_A 3 TCETVTGCTCNE--GKKEVDCQGKSLDS-VPSGI------------------------P--ADTEKLDLQSTGLATLSDA 53 (251)
T ss_dssp -CHHHHSSEEEG--GGTEEECTTCCCSS-CCSCC------------------------C--TTCCEEECTTSCCCCCCTT
T ss_pred cCCCCCceEcCC--CCeEEecCCCCccc-cCCCC------------------------C--CCCCEEEccCCCcCccCHh
Confidence 488999999953 23457777777763 33222 2 3455555555555555555
Q ss_pred CCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCCcCCccccCccccceeeeccccccccCCccCCCCcch
Q 037197 133 GLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSL 212 (1009)
Q Consensus 133 ~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 212 (1009)
.++++++|++|+|++|++++..|..+.++++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|
T Consensus 54 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 133 (251)
T 3m19_A 54 TFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKL 133 (251)
T ss_dssp TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred HhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcc
Confidence 55555666666666666665555556666666666666666665555666667777777777777765555556677777
Q ss_pred hhhhcccccccccCCccccCCCCccEEEeccCccccccCcccCCCCCCcEEEcccCCcCCC
Q 037197 213 ETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGK 273 (1009)
Q Consensus 213 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 273 (1009)
++|+|++|++++..+..|+++++|++|+|++|++++..+..|..+++|+.|+|++|.+++.
T Consensus 134 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 134 KELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 7777777777766666777778888888888888877777788888888888888888754
No 338
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=5.3e-25 Score=248.59 Aligned_cols=259 Identities=20% Similarity=0.225 Sum_probs=181.5
Q ss_pred EEeccccccccccccccccCCCCCeEecccCcccccCC----ccccccC-ccCcccccccccCCCCCCCCCCC-----cC
Q 037197 70 KLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSLP----KSLANLT-ALKSMDVSQNNFIGSFPTGLGKA-----SG 139 (1009)
Q Consensus 70 ~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~----~~l~~l~-~L~~L~Ls~n~l~~~~p~~l~~l-----~~ 139 (1009)
..+|+.++++|.++..+...++|++|+|++|.+++..+ ..+.+++ +|++|+|++|.+++..+..++.+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35789999999998888888889999999999988877 7888899 99999999999998878777765 99
Q ss_pred CeEEecCCCCCCCCCCccccC----C-CCCCeeeccCCccCCcCCcccc----C-ccccceeeeccccccccCCcc----
Q 037197 140 LTSVNASSNNFSGFLPEDLGN----A-TSLESLDFRGSFFEGSVPTSFR----N-LQKLKFLGLSGNNLTGKIPPE---- 205 (1009)
Q Consensus 140 L~~L~Ls~n~l~~~~p~~l~~----l-~~L~~L~L~~n~~~~~~p~~~~----~-l~~L~~L~L~~n~l~~~~p~~---- 205 (1009)
|++|+|++|++++..+..++. + ++|++|+|++|.+++..+..+. . .++|++|+|++|.+++..+..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 999999999999887775554 4 8999999999999977766554 3 369999999999999644333
Q ss_pred CCCCc-chhhhhcccccccccCCccccC----C-CCccEEEeccCccccc----cCcccCC-CCCCcEEEcccCCcCCCC
Q 037197 206 LGQLS-SLETIILGYNAFEGEIPAEFGN----L-TNLRYLDLAVGSLSGQ----IPPALGR-LKKLTTVYLYKNNFTGKI 274 (1009)
Q Consensus 206 l~~l~-~L~~L~L~~n~l~~~~~~~~~~----l-~~L~~L~L~~n~l~~~----~~~~l~~-l~~L~~L~L~~n~l~~~~ 274 (1009)
+..++ +|++|+|++|++++..+..++. + ++|++|+|++|.+++. ++..+.. .++|++|+|++|.+++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 34444 7777777777777666544433 3 4677777777766642 2333333 235555555555555432
Q ss_pred CcccccccccccccccccccCCCcchhhhcccCCCeEeccccccCCCC-------CcCCCCCCcccEEEccCCccCccCC
Q 037197 275 PPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLI-------PDKLGELTKLEVLELWKNSLIGSLP 347 (1009)
Q Consensus 275 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~-------~~~l~~l~~L~~L~L~~N~l~~~~~ 347 (1009)
+..+. ..+..+++|+.|++++|.+.+.. +..+..+++|+.||+++|.+.+..+
T Consensus 242 ~~~l~--------------------~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 242 LENLK--------------------LLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HHHHH--------------------HTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred HHHHH--------------------HHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 21111 11233344555555555533222 2356677778888888888766544
Q ss_pred c
Q 037197 348 M 348 (1009)
Q Consensus 348 ~ 348 (1009)
.
T Consensus 302 ~ 302 (362)
T 3goz_A 302 I 302 (362)
T ss_dssp H
T ss_pred H
Confidence 3
No 339
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=1.2e-24 Score=243.36 Aligned_cols=222 Identities=16% Similarity=0.213 Sum_probs=158.1
Q ss_pred CCCeEecccCcccccCCcccccc--CccCcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCC-CCccccCCCCCCee
Q 037197 91 SLSSLNICCNEFASSLPKSLANL--TALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGF-LPEDLGNATSLESL 167 (1009)
Q Consensus 91 ~L~~L~L~~n~~~~~~~~~l~~l--~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~-~p~~l~~l~~L~~L 167 (1009)
.++.|+++++.+. +..+..+ +++++|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4788999988876 5667777 8899999999988876655 56788888888888888765 77778888888888
Q ss_pred eccCCccCCcCCccccCccccceeeeccc-ccccc-CCccCCCCcchhhhhcccc-ccccc-CCccccCCC-CccEEEec
Q 037197 168 DFRGSFFEGSVPTSFRNLQKLKFLGLSGN-NLTGK-IPPELGQLSSLETIILGYN-AFEGE-IPAEFGNLT-NLRYLDLA 242 (1009)
Q Consensus 168 ~L~~n~~~~~~p~~~~~l~~L~~L~L~~n-~l~~~-~p~~l~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~-~L~~L~L~ 242 (1009)
+|++|.+++..+..++.+++|++|+|++| .+++. ++..+..+++|++|++++| .+++. ++..+..++ +|++|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 88888888777778888888888888888 56652 5555667777777777777 77654 456667777 77777777
Q ss_pred cC--ccc-cccCcccCCCCCCcEEEcccCC-cCCCCCcccccccccccccccccc-cCCCcchhhhcccCCCeEecccc
Q 037197 243 VG--SLS-GQIPPALGRLKKLTTVYLYKNN-FTGKIPPELGSITSLAFLDLSDNQ-ISGEIPVKLAELKNLQLLNLMCN 316 (1009)
Q Consensus 243 ~n--~l~-~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~l~~l~~L~~L~L~~N 316 (1009)
+| .++ +.++..+..+++|++|++++|. +++..+..+..+++|++|+|++|. +.......+..+++|+.|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 77 344 3445555666777777777776 555555566666666666666663 22221224555666666666665
No 340
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=1.7e-22 Score=215.42 Aligned_cols=183 Identities=19% Similarity=0.238 Sum_probs=145.1
Q ss_pred cccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccc
Q 037197 403 SLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMAS 482 (1009)
Q Consensus 403 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~ 482 (1009)
+.++++++++.++ .+|..+. ++|+.|+|++|++++..+..+..+++|++|+|++|+|+++.+..|..+++|+.|+++
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4556666666666 4555444 467777777777776666677777777777777777777777777777888888888
Q ss_pred cCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCcccccccc
Q 037197 483 HNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRI 562 (1009)
Q Consensus 483 ~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 562 (1009)
+|++++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|+.+++|+.|||++|+|++..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 88887777777888888888888888888777777888889999999999998777778888999999999999999888
Q ss_pred CcCcCCCCCCcEEecCCCccccCCCC
Q 037197 563 PENFGASPALEMLNLSYNKLEGPVPS 588 (1009)
Q Consensus 563 p~~~~~l~~L~~L~ls~N~l~g~ip~ 588 (1009)
|..|..++.|+.|+|++|++++..+.
T Consensus 172 ~~~~~~l~~L~~L~l~~N~~~c~~~~ 197 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGNQFDCSRCE 197 (251)
T ss_dssp TTTTTTCTTCCEEECCSCCBCTTSTT
T ss_pred HHHHhCCCCCCEEEeeCCceeCCccc
Confidence 88888899999999999999887443
No 341
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=3.9e-25 Score=252.25 Aligned_cols=240 Identities=19% Similarity=0.209 Sum_probs=139.6
Q ss_pred cccccccCCCCCeEecccCcccccCC----ccccccCccCccccccc---ccCCCCCCCC-------CCCcCCeEEecCC
Q 037197 82 VSENIRGLRSLSSLNICCNEFASSLP----KSLANLTALKSMDVSQN---NFIGSFPTGL-------GKASGLTSVNASS 147 (1009)
Q Consensus 82 ~~~~l~~l~~L~~L~L~~n~~~~~~~----~~l~~l~~L~~L~Ls~n---~l~~~~p~~l-------~~l~~L~~L~Ls~ 147 (1009)
++..+..+++|++|+|++|.+++..+ ..+..+++|++|+|++| ++.+.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 44566677777777777777766533 33557777777777775 3344455444 5667777777777
Q ss_pred CCCCC----CCCccccCCCCCCeeeccCCccCCcCCcccc----Cc---------cccceeeecccccc-ccCC---ccC
Q 037197 148 NNFSG----FLPEDLGNATSLESLDFRGSFFEGSVPTSFR----NL---------QKLKFLGLSGNNLT-GKIP---PEL 206 (1009)
Q Consensus 148 n~l~~----~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~----~l---------~~L~~L~L~~n~l~-~~~p---~~l 206 (1009)
|.+++ .+|..+..+++|++|+|++|.++...+..+. .+ ++|++|+|++|+++ +.+| ..+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 77765 3556666777777777777776543333332 22 56666666666665 2233 244
Q ss_pred CCCcchhhhhcccccccc-----cCCccccCCCCccEEEeccCccc----cccCcccCCCCCCcEEEcccCCcCCC----
Q 037197 207 GQLSSLETIILGYNAFEG-----EIPAEFGNLTNLRYLDLAVGSLS----GQIPPALGRLKKLTTVYLYKNNFTGK---- 273 (1009)
Q Consensus 207 ~~l~~L~~L~L~~n~l~~-----~~~~~~~~l~~L~~L~L~~n~l~----~~~~~~l~~l~~L~~L~L~~n~l~~~---- 273 (1009)
..+++|++|+|++|+++. ..+..+..+++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++.
T Consensus 184 ~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~ 263 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 263 (386)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred HhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHH
Confidence 455566666666666552 22335556666666666666664 34555555566666666666665543
Q ss_pred CCcccc--cccccccccccccccCC----Ccchhh-hcccCCCeEeccccccCCC
Q 037197 274 IPPELG--SITSLAFLDLSDNQISG----EIPVKL-AELKNLQLLNLMCNQLTGL 321 (1009)
Q Consensus 274 ~~~~~~--~l~~L~~L~Ls~N~l~~----~~~~~l-~~l~~L~~L~L~~N~l~~~ 321 (1009)
++..+. .+++|+.|+|++|.+++ .+|..+ .++++|++|++++|++++.
T Consensus 264 l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 264 VVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp HHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred HHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 233332 25556666666665554 244444 3355555555555555544
No 342
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1.3e-22 Score=214.76 Aligned_cols=196 Identities=19% Similarity=0.197 Sum_probs=122.4
Q ss_pred CCceeecccccccccCCcccccCccccEEEcccCc-cccccCCccCCCCcccEEEeec-ccccccCCcCCcCCCCCcEEe
Q 037197 379 NLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNL-ISGTIPVGLGNLPSLQRLEMAN-NNLTGQIPDDISLSTSLSFVD 456 (1009)
Q Consensus 379 ~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ 456 (1009)
+|+.|++++|++++..+..+.++++|++|++++|+ +++..+..|.++++|++|++++ |++++..+..|..+++|+.|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 56666666666665555566666666666666665 5544445666666666666666 666655555666666666666
Q ss_pred cccCcccccCCCcccCCcccc---hhccccC-cccCCcccccccCCcCc-EEEeecCCCCCCCCccccccccceeeeecC
Q 037197 457 ISWNHLESYLPSSILSIPSLQ---TFMASHN-NLQAKIPNELQACPSLS-VLDLSSNSLSGEIPASIASCEKLVSLNLRN 531 (1009)
Q Consensus 457 Ls~N~l~~~~~~~~~~l~~L~---~L~l~~N-~l~~~~p~~~~~l~~L~-~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~ 531 (1009)
+++|++++ +|. |..+++|+ .|++++| ++++..+..|..+++|+ .|+|++|+++...+..|.. ++|+.|+|++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCC
Confidence 66666666 333 55555555 6666666 66655555666667777 7777777776333333333 6677777777
Q ss_pred cc-cccCCCcccccc-cccceecCCccccccccCcCcCCCCCCcEEecCCC
Q 037197 532 NR-FSGEIPKAVATM-PTLAILDMSNNSLFGRIPENFGASPALEMLNLSYN 580 (1009)
Q Consensus 532 N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 580 (1009)
|+ +++..+..|..+ ++|+.|||++|++++..+. .++.|+.|+++++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 74 765555666777 7777777777777644333 4556666666654
No 343
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1.4e-22 Score=214.60 Aligned_cols=196 Identities=18% Similarity=0.182 Sum_probs=118.4
Q ss_pred CCeEEecCCCCCCCCCCccccCCCCCCeeeccCCc-cCCcCCccccCccccceeeecc-ccccccCCccCCCCcchhhhh
Q 037197 139 GLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSF-FEGSVPTSFRNLQKLKFLGLSG-NNLTGKIPPELGQLSSLETII 216 (1009)
Q Consensus 139 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~-~~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~l~~l~~L~~L~ 216 (1009)
+|++|++++|++++..+..++++++|++|++++|. ++...+..|.++++|++|+|++ |++++..+..|..+++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 56666666666665545556666666666666664 5544445566666666666666 666655455566666666666
Q ss_pred cccccccccCCccccCCCCcc---EEEeccC-ccccccCcccCCCCCCc-EEEcccCCcCCCCCcccccccccccccccc
Q 037197 217 LGYNAFEGEIPAEFGNLTNLR---YLDLAVG-SLSGQIPPALGRLKKLT-TVYLYKNNFTGKIPPELGSITSLAFLDLSD 291 (1009)
Q Consensus 217 L~~n~l~~~~~~~~~~l~~L~---~L~L~~n-~l~~~~~~~l~~l~~L~-~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 291 (1009)
+++|++++ +|. |+.+++|+ +|++++| .+++..+..|..+++|+ +|++++|.++. +|......++|+.|+|++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~-i~~~~~~~~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTS-VQGYAFNGTKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCE-ECTTTTTTCEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcc-cCHhhcCCCCCCEEEcCC
Confidence 66666664 443 55666665 6777776 66655555666667777 77777776663 333322226666777777
Q ss_pred cc-cCCCcchhhhcc-cCCCeEeccccccCCCCCcCCCCCCcccEEEccCC
Q 037197 292 NQ-ISGEIPVKLAEL-KNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKN 340 (1009)
Q Consensus 292 N~-l~~~~~~~l~~l-~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 340 (1009)
|+ +++..+..|..+ ++|+.|++++|++++..+. .+++|+.|+++++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 63 664445556666 6677777777766654333 3455566665544
No 344
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=8.3e-25 Score=249.53 Aligned_cols=247 Identities=19% Similarity=0.248 Sum_probs=128.5
Q ss_pred CcchhhhcccCCCeEeccccccCCCCC----cCCCCCCcccEEEccCCc---cCccCCccc-------cCCCCCceeecc
Q 037197 297 EIPVKLAELKNLQLLNLMCNQLTGLIP----DKLGELTKLEVLELWKNS---LIGSLPMRL-------GQSSPLRRLDAS 362 (1009)
Q Consensus 297 ~~~~~l~~l~~L~~L~L~~N~l~~~~~----~~l~~l~~L~~L~L~~N~---l~~~~~~~~-------~~~~~L~~L~Ls 362 (1009)
.++..+..+++|++|+|++|.+++..+ ..+..+++|++|+|++|. +++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 344455555666666666666654322 235556666666666543 223333222 344444444444
Q ss_pred Cccccc----cCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCccccccCCccCCC---------Cccc
Q 037197 363 SNLLSG----EIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNL---------PSLQ 429 (1009)
Q Consensus 363 ~N~l~~----~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l---------~~L~ 429 (1009)
+|.+++ .+|..+..+++|+.|+|++|.++...+..+.. .+..+ ++|+
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~--------------------~l~~l~~~~~~~~~~~L~ 162 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIAR--------------------ALQELAVNKKAKNAPPLR 162 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHH--------------------HHHHHHHHHHHHTCCCCC
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHH--------------------HHHHHhhhhhcccCCCCc
Confidence 444443 23333333444444444444443222211111 11111 4444
Q ss_pred EEEeeccccc-ccCC---cCCcCCCCCcEEecccCcccc-----cCCCcccCCcccchhccccCccc----CCccccccc
Q 037197 430 RLEMANNNLT-GQIP---DDISLSTSLSFVDISWNHLES-----YLPSSILSIPSLQTFMASHNNLQ----AKIPNELQA 496 (1009)
Q Consensus 430 ~L~L~~N~l~-~~~p---~~~~~l~~L~~L~Ls~N~l~~-----~~~~~~~~l~~L~~L~l~~N~l~----~~~p~~~~~ 496 (1009)
+|+|++|+++ +.+| ..+..+++|+.|+|++|+|+. ..+..+..+++|+.|++++|.++ ..+|..+..
T Consensus 163 ~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~ 242 (386)
T 2ca6_A 163 SIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKS 242 (386)
T ss_dssp EEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGG
T ss_pred EEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHcc
Confidence 4444444443 2222 233344455555555555441 22334455555555555555554 345666777
Q ss_pred CCcCcEEEeecCCCCCC----CCcccc--ccccceeeeecCccccc----CCCccc-ccccccceecCCccccccccC
Q 037197 497 CPSLSVLDLSSNSLSGE----IPASIA--SCEKLVSLNLRNNRFSG----EIPKAV-ATMPTLAILDMSNNSLFGRIP 563 (1009)
Q Consensus 497 l~~L~~LdLs~N~l~~~----~p~~~~--~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~Ls~N~l~~~~p 563 (1009)
+++|+.|+|++|++++. +|..+. .+++|+.|+|++|++++ .+|..+ .++++|+.|+|++|++++..|
T Consensus 243 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 243 WPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp CTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 77777777777777654 445542 36777777777777776 466666 557778888888887776664
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=7.9e-22 Score=216.95 Aligned_cols=192 Identities=21% Similarity=0.374 Sum_probs=133.9
Q ss_pred CCCCceeecccccccccCCcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEe
Q 037197 377 SGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVD 456 (1009)
Q Consensus 377 l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 456 (1009)
+++|+.|++++|.++. ++ .+..+++|++|++++|++++..+ +..+++|++|+|++|++++. + .+..+++|+.|+
T Consensus 40 l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEE
T ss_pred cCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEE
Confidence 4445555555555542 22 35556666666666666654333 66666666666666666642 2 466666777777
Q ss_pred cccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCccccc
Q 037197 457 ISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSG 536 (1009)
Q Consensus 457 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 536 (1009)
+++|+++++. .+..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++
T Consensus 114 l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 114 LTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp CTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCc
Confidence 7777776643 26677777777777777775443 7788888888888888886444 7788888888888888885
Q ss_pred CCCcccccccccceecCCccccccccCcCcCCCCCCcEEecCCCcccc
Q 037197 537 EIPKAVATMPTLAILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEG 584 (1009)
Q Consensus 537 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g 584 (1009)
..+ +..+++|+.|+|++|++++..| +..+++|+.|+|++|++++
T Consensus 188 ~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 188 ISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred Chh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 443 7888888888888888887664 7888888999999998876
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=7.2e-22 Score=217.25 Aligned_cols=194 Identities=28% Similarity=0.432 Sum_probs=95.6
Q ss_pred cccCccCcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCCcCCccccCccccce
Q 037197 111 ANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVPTSFRNLQKLKF 190 (1009)
Q Consensus 111 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~ 190 (1009)
..+++|++|++++|.+.. +| .+..+++|++|+|++|++++..+ +..+++|++|+|++|.+++. ..+..+++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~ 111 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKT 111 (308)
T ss_dssp HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCE
T ss_pred HHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCE
Confidence 344444555555444432 22 34444455555555555443222 44555555555555554432 23455555555
Q ss_pred eeeccccccccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEeccCccccccCcccCCCCCCcEEEcccCCc
Q 037197 191 LGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNF 270 (1009)
Q Consensus 191 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 270 (1009)
|+|++|++++ ++ .+..+++|++|++++|++++..+ ++++++|++|++++|.+++..+ +..+++|+.|++++|.+
T Consensus 112 L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l 185 (308)
T 1h6u_A 112 LDLTSTQITD-VT-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKI 185 (308)
T ss_dssp EECTTSCCCC-CG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCC-ch-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCcc
Confidence 5555555553 22 14455555555555555543322 5555555555555555553322 55555555555555555
Q ss_pred CCCCCcccccccccccccccccccCCCcchhhhcccCCCeEeccccccCC
Q 037197 271 TGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTG 320 (1009)
Q Consensus 271 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 320 (1009)
++..+ +..+++|++|+|++|++++.. .+..+++|+.|++++|++++
T Consensus 186 ~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 186 SDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred CcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 53322 455555555555555555332 24555555555555555553
No 347
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=2.3e-21 Score=200.45 Aligned_cols=186 Identities=24% Similarity=0.278 Sum_probs=130.0
Q ss_pred CCceeeeEEeCCCCceeEEeccccccccccccccccCCCCCeEecccCcccccCCccccccCccCcccccccccCCCCCC
Q 037197 53 LHCNWTGVWCNSRGFVEKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPT 132 (1009)
Q Consensus 53 ~~C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~ 132 (1009)
+.|+|++|.|+..+. + .+|..+ .++|++|+|++|.+++..+..++++++|++|+|++|++++..+.
T Consensus 5 C~C~~~~v~c~~~~l-----------~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (208)
T 2o6s_A 5 CSCSGTTVECYSQGR-----------T-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNG 70 (208)
T ss_dssp CEEETTEEECCSSCC-----------S-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred CEECCCEEEecCCCc-----------c-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChh
Confidence 458999999975431 1 122222 34677777777777766666677777777777777777765555
Q ss_pred CCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCCcCCccccCccccceeeeccccccccCCccCCCCcch
Q 037197 133 GLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSL 212 (1009)
Q Consensus 133 ~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 212 (1009)
.++.+++|++|+|++|++++..+..++++++|++|++++|.+++..+..|.++++|++|+|++|++++..+..+..+++|
T Consensus 71 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 150 (208)
T 2o6s_A 71 VFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSL 150 (208)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred hcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCc
Confidence 56777777777777777776555667777777777777777776666667777777777777777776555557777777
Q ss_pred hhhhcccccccccCCccccCCCCccEEEeccCccccccCcccCCCCC
Q 037197 213 ETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIPPALGRLKK 259 (1009)
Q Consensus 213 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~ 259 (1009)
++|++++|.+.+ .+++|++|+++.|+++|.+|..++.++.
T Consensus 151 ~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 151 QYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred cEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 777777776653 3456777777777777777777776654
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=1.3e-21 Score=219.53 Aligned_cols=246 Identities=17% Similarity=0.168 Sum_probs=124.2
Q ss_pred CCceeeeEEeCCCCceeEEeccccccccccccccccCCCCCeEecccCcccccCCccccccCccCcccccccccCCCCCC
Q 037197 53 LHCNWTGVWCNSRGFVEKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPT 132 (1009)
Q Consensus 53 ~~C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~ 132 (1009)
+.|+|+.|.|+. ++++ .+|..+ .+++++|+|++|+++...+.+|+++++|++|+|++|++.+.+|.
T Consensus 7 C~C~~~~v~C~~-----------~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~ 72 (350)
T 4ay9_X 7 CHCSNRVFLCQE-----------SKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEA 72 (350)
T ss_dssp SEEETTEEEEES-----------TTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECT
T ss_pred cEeeCCEEEecC-----------CCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccCh
Confidence 448888888853 3343 244433 24567777777777654445566677777777776666554443
Q ss_pred -CCCCCcCCeE-EecCCCCCCCCCCccccCCCCCCeeeccCCccCCcCCccccCccccceeeeccccccccCCccCCCCc
Q 037197 133 -GLGKASGLTS-VNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLS 210 (1009)
Q Consensus 133 -~l~~l~~L~~-L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 210 (1009)
.+.++++|++ +.+++|+++...|..|..+++|++|++++|.+....+..+....++..|++.++
T Consensus 73 ~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~-------------- 138 (350)
T 4ay9_X 73 DVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDN-------------- 138 (350)
T ss_dssp TSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESC--------------
T ss_pred hHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccc--------------
Confidence 3455555443 444455555444555555555555555555555444444444444555555332
Q ss_pred chhhhhcccccccccCCccccCCC-CccEEEeccCccccccCcccCCCCCCcEEEccc-CCcCCCCCccccccccccccc
Q 037197 211 SLETIILGYNAFEGEIPAEFGNLT-NLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYK-NNFTGKIPPELGSITSLAFLD 288 (1009)
Q Consensus 211 ~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~ 288 (1009)
|+++...+..|..+. .|++|+|++|+|+.. +.......+|++|++++ |.++...+..|..+++|++||
T Consensus 139 ---------~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i-~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~Ld 208 (350)
T 4ay9_X 139 ---------INIHTIERNSFVGLSFESVILWLNKNGIQEI-HNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILD 208 (350)
T ss_dssp ---------TTCCEECTTSSTTSBSSCEEEECCSSCCCEE-CTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEE
T ss_pred ---------cccccccccchhhcchhhhhhccccccccCC-ChhhccccchhHHhhccCCcccCCCHHHhccCcccchhh
Confidence 333333333344432 355555555555532 22222334555555543 333322223455556666666
Q ss_pred ccccccCCCcchhhhcccCCCeEecccc-ccCCCCCcCCCCCCcccEEEccCCc
Q 037197 289 LSDNQISGEIPVKLAELKNLQLLNLMCN-QLTGLIPDKLGELTKLEVLELWKNS 341 (1009)
Q Consensus 289 Ls~N~l~~~~~~~l~~l~~L~~L~L~~N-~l~~~~~~~l~~l~~L~~L~L~~N~ 341 (1009)
|++|+|+...+..+. +|+.|.+.++ .++ .+| .+.++++|+.+++.++.
T Consensus 209 Ls~N~l~~lp~~~~~---~L~~L~~l~~~~l~-~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 209 ISRTRIHSLPSYGLE---NLKKLRARSTYNLK-KLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp CTTSCCCCCCSSSCT---TCCEEECTTCTTCC-CCC-CTTTCCSCCEEECSCHH
T ss_pred cCCCCcCccChhhhc---cchHhhhccCCCcC-cCC-CchhCcChhhCcCCCCc
Confidence 666666533232333 3333333222 233 233 25666666666665443
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.84 E-value=1e-20 Score=212.24 Aligned_cols=220 Identities=18% Similarity=0.147 Sum_probs=105.8
Q ss_pred ceeeccCccccccCCcCccCCCCCceeecccccccccCC-cccccCccccE-EEcccCccccccCCccCCCCcccEEEee
Q 037197 357 RRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFP-VSLSTCKSLVR-VRVQNNLISGTIPVGLGNLPSLQRLEMA 434 (1009)
Q Consensus 357 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p-~~l~~~~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 434 (1009)
++|+|++|+|+...+..|..+++|++|+|++|++.+.+| ..|.+++++.+ +.+..|+++...|..|..+++|++|+++
T Consensus 33 ~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~ 112 (350)
T 4ay9_X 33 IELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLIS 112 (350)
T ss_dssp SEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEE
T ss_pred CEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccccccccc
Confidence 333333333332222334444444444444444433222 23444444433 3344455554445555555555555555
Q ss_pred cccccccCCcCCcCCCCCcEEeccc-CcccccCCCcccCCc-ccchhccccCcccCCcccccccCCcCcEEEeec-CCCC
Q 037197 435 NNNLTGQIPDDISLSTSLSFVDISW-NHLESYLPSSILSIP-SLQTFMASHNNLQAKIPNELQACPSLSVLDLSS-NSLS 511 (1009)
Q Consensus 435 ~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~-N~l~ 511 (1009)
+|++++..+..+....++..|++++ |++..+.+..|..+. .++.|++++|+|+.. |.......+|+.|++++ |.++
T Consensus 113 ~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i-~~~~f~~~~L~~l~l~~~n~l~ 191 (350)
T 4ay9_X 113 NTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEI-HNSAFNGTQLDELNLSDNNNLE 191 (350)
T ss_dssp EECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEE-CTTSSTTEEEEEEECTTCTTCC
T ss_pred ccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCC-ChhhccccchhHHhhccCCccc
Confidence 5555544444444444555555533 345554444454443 355555555555532 22323344566666653 4454
Q ss_pred CCCCccccccccceeeeecCcccccCCCcccccccccceecCCccccccccCcCcCCCCCCcEEecCCCc
Q 037197 512 GEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASPALEMLNLSYNK 581 (1009)
Q Consensus 512 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 581 (1009)
...+..|..+++|+.|+|++|+|+...+..|.++++|+.+++. ++ ..+| .+.++++|+.++++++.
T Consensus 192 ~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~~--~l-~~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 192 ELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY--NL-KKLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp CCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTCT--TC-CCCC-CTTTCCSCCEEECSCHH
T ss_pred CCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccCC--Cc-CcCC-CchhCcChhhCcCCCCc
Confidence 3333455666666666666666663333344444444444432 22 2444 35566666666666543
No 350
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=1e-21 Score=231.69 Aligned_cols=199 Identities=23% Similarity=0.330 Sum_probs=120.6
Q ss_pred eeeeE-EeCCCCceeEEeccccccccccccccccCCCCCeEecccCcccccCCccccccCccCcccccccccCCCCCCCC
Q 037197 56 NWTGV-WCNSRGFVEKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGL 134 (1009)
Q Consensus 56 ~w~gv-~C~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l 134 (1009)
.|.|+ .|.. ++++.|+|+++++++ +|..+ +++|++|+|++|.++ .+| ..+++|++|+|++|++++ +|. +
T Consensus 49 ~~~~l~~C~~-~~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l 118 (571)
T 3cvr_A 49 AVSLLKECLI-NQFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-L 118 (571)
T ss_dssp HHHHHHHHHH-TTCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-C
T ss_pred hhhhcccccc-CCccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-h
Confidence 69999 7853 467888888888876 55544 256666666666665 444 345566666666666654 444 4
Q ss_pred CCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCCcCCccccCccccceeeeccccccccCCccCCCCcchhh
Q 037197 135 GKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSLET 214 (1009)
Q Consensus 135 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 214 (1009)
+. +|++|+|++|++++ +|. .+++|+.|+|++|.+++ +|. .++ +|++
T Consensus 119 ~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~------------------------~L~~ 164 (571)
T 3cvr_A 119 PA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPT------------------------SLEV 164 (571)
T ss_dssp CT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCT------------------------TCCE
T ss_pred hc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCC------------------------CcCE
Confidence 43 55555555555554 333 34555555555555543 332 234 4455
Q ss_pred hhcccccccccCCccccCCCCccEEEeccCccccccCcccCCCCCC-------cEEEcccCCcCCCCCcccccccccccc
Q 037197 215 IILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIPPALGRLKKL-------TTVYLYKNNFTGKIPPELGSITSLAFL 287 (1009)
Q Consensus 215 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L-------~~L~L~~n~l~~~~~~~~~~l~~L~~L 287 (1009)
|+|++|+|++ +|. |. ++|++|+|++|+|+ .+|. +.. +| +.|+|++|+|+ .+|..+..+++|+.|
T Consensus 165 L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L 235 (571)
T 3cvr_A 165 LSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTI 235 (571)
T ss_dssp EECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEE
T ss_pred EECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEE
Confidence 5555555443 333 33 55666666666655 3444 333 44 88888888888 577777778888888
Q ss_pred cccccccCCCcchhhhcccC
Q 037197 288 DLSDNQISGEIPVKLAELKN 307 (1009)
Q Consensus 288 ~Ls~N~l~~~~~~~l~~l~~ 307 (1009)
+|++|.+++.+|..+..+..
T Consensus 236 ~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 236 ILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp ECCSSSCCHHHHHHHHHHHH
T ss_pred EeeCCcCCCcCHHHHHHhhc
Confidence 88888888888887777654
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=8.2e-21 Score=196.25 Aligned_cols=160 Identities=20% Similarity=0.203 Sum_probs=75.5
Q ss_pred cccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccc
Q 037197 403 SLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMAS 482 (1009)
Q Consensus 403 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~ 482 (1009)
+|++|++++|++++..+..|..+++|++|++++|++++..+..+..+++|++|+|++|+++++.+..|..+++|+.|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 34444444444443333334444444444444444443333334444444444444444444444444444444444444
Q ss_pred cCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCcccccccc
Q 037197 483 HNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRI 562 (1009)
Q Consensus 483 ~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 562 (1009)
+|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+.+ .++.|++|+++.|+++|.+
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~i 181 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVV 181 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTB
T ss_pred CCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCcee
Confidence 444444334444455555555555555554444445555555555555554442 2234555555555555555
Q ss_pred CcCcCCC
Q 037197 563 PENFGAS 569 (1009)
Q Consensus 563 p~~~~~l 569 (1009)
|..++.+
T Consensus 182 p~~~~~l 188 (208)
T 2o6s_A 182 RNSAGSV 188 (208)
T ss_dssp BCTTSSB
T ss_pred eccCccc
Confidence 5554443
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=4.9e-21 Score=225.81 Aligned_cols=167 Identities=29% Similarity=0.478 Sum_probs=95.4
Q ss_pred CCceeecccccccccCCcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecc
Q 037197 379 NLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDIS 458 (1009)
Q Consensus 379 ~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 458 (1009)
+|+.|++++|+|+ .+| ..+++|+.|++++|+|++ +|. +.. +|+.|+|++|+|++ +|. .+++|+.|+|+
T Consensus 81 ~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 148 (571)
T 3cvr_A 81 QITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINAD 148 (571)
T ss_dssp TCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECC
T ss_pred CCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCC
Confidence 3444444444444 233 223455555555555553 443 333 55555555555554 443 34556666666
Q ss_pred cCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccc-------eeeeecC
Q 037197 459 WNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKL-------VSLNLRN 531 (1009)
Q Consensus 459 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L-------~~L~Ls~ 531 (1009)
+|+|++ +|. .+++|+.|++++|++++ +|. |. ++|+.|||++|+|+ .+|. |.. +| +.|+|++
T Consensus 149 ~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~ 216 (571)
T 3cvr_A 149 NNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRE 216 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCS
T ss_pred CCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCC
Confidence 666655 232 34556666666666654 444 44 66777777777776 4454 443 55 7777777
Q ss_pred cccccCCCcccccccccceecCCccccccccCcCcCCCC
Q 037197 532 NRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASP 570 (1009)
Q Consensus 532 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 570 (1009)
|+|+ .+|..+..+++|+.|+|++|+|++.+|..+..++
T Consensus 217 N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 217 NRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp SCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred Ccce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 7777 5677777777777777777777777777665543
No 353
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.84 E-value=2.7e-21 Score=209.08 Aligned_cols=145 Identities=13% Similarity=0.068 Sum_probs=114.6
Q ss_pred CCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCCh----------------hhHHHHHHHHHHHhccCCCceeeEE
Q 037197 700 VKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDI----------------ESGDDLFREVSLLGRLRHRNIVRLL 763 (1009)
Q Consensus 700 ~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~----------------~~~~~~~~E~~~l~~l~Hpniv~l~ 763 (1009)
|+..+.||+|+||.||+|.+ .+|+.||+|.++...... .....+.+|++++++++ | +++.
T Consensus 92 ~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~ 167 (282)
T 1zar_A 92 DAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVP 167 (282)
T ss_dssp SEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSC
T ss_pred EEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcC
Confidence 55668999999999999999 679999999986432111 13456779999999998 4 5666
Q ss_pred eEEEcCCeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcE
Q 037197 764 GYLHNETNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEA 843 (1009)
Q Consensus 764 ~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~ 843 (1009)
+++.. +..++||||+++++|.+ +... ....++.|+++||+|||+. +|+||||||+||+++ ++.+
T Consensus 168 ~~~~~-~~~~lvmE~~~g~~L~~-l~~~----------~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~v 231 (282)
T 1zar_A 168 KVYAW-EGNAVLMELIDAKELYR-VRVE----------NPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGI 231 (282)
T ss_dssp CEEEE-ETTEEEEECCCCEEGGG-CCCS----------CHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEE
T ss_pred eEEec-cceEEEEEecCCCcHHH-cchh----------hHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcE
Confidence 65544 45699999999999998 4221 1235899999999999998 999999999999999 9999
Q ss_pred EEcccccceecccCCCceeeecccCcccCCcccC
Q 037197 844 RIADFGLARMMLHKNETVSMVAGSYGYIAPEYGY 877 (1009)
Q Consensus 844 kl~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~ 877 (1009)
||+|||+++.. ..|.|||++.
T Consensus 232 kl~DFG~a~~~-------------~~~~a~e~l~ 252 (282)
T 1zar_A 232 WIIDFPQSVEV-------------GEEGWREILE 252 (282)
T ss_dssp EECCCTTCEET-------------TSTTHHHHHH
T ss_pred EEEECCCCeEC-------------CCCCHHHHHH
Confidence 99999999643 3567888643
No 354
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=8.1e-21 Score=197.77 Aligned_cols=156 Identities=19% Similarity=0.261 Sum_probs=117.2
Q ss_pred EEEeecccccccCCcCCcCCCCCcEEecccCcccccCC-CcccCCcccchhccccCcccCCcccccccCCcCcEEEeecC
Q 037197 430 RLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLP-SSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSN 508 (1009)
Q Consensus 430 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N 508 (1009)
.+++++|.++ .+|..+. ..++.|+|++|+|+++.+ ..|..+++|+.|++++|++++..+..|..+++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 4555555554 3444332 234566666666666533 34566667777777777776666667788888888888888
Q ss_pred CCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCccccccccCcCcCCCCCCcEEecCCCccccCCCC
Q 037197 509 SLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEGPVPS 588 (1009)
Q Consensus 509 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~ 588 (1009)
+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++.+|..|..+++|++|+|++|++++..+-
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCch
Confidence 88877777888888888888888888888888888888899999999999888888898899999999999999887663
No 355
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.82 E-value=1.2e-21 Score=239.98 Aligned_cols=268 Identities=18% Similarity=0.177 Sum_probs=81.0
Q ss_pred cChHHhHHHHHHHHhhccCC-CCCCCCCCCCCccccCCcCCceeeeEEeCCCCceeEEeccccccccccccccccCCCCC
Q 037197 15 SNADDELSTLLSIKAGLIDP-LNMLEDWKMPSNAAENGLLHCNWTGVWCNSRGFVEKLDLSNMSLNGSVSENIRGLRSLS 93 (1009)
Q Consensus 15 ~~~~~~~~~ll~~k~~~~d~-~~~l~~W~~~~~~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~ 93 (1009)
+..+.++++|+++...+..+ ...-..|.... +..+.|.+++++. .+++.|+|.++++... +. ..|+
T Consensus 128 s~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~s~-~~~~~l~L~~n~~~~~-~~-----~~l~ 194 (727)
T 4b8c_D 128 SLVDCTKQALMEMADTLTDSKTAKKQQPTGDS------TPSGTATNSAVST-PLTPKIELFANGKDEA-NQ-----ALLQ 194 (727)
T ss_dssp ----CCCHHHHHHHHHHHHHHTTC--------------------------------------------------------
T ss_pred hccccchhhhhhhhhhcccccCcccCCCcCCC------CccccCCCceecC-CccceEEeeCCCCCcc-hh-----hHhh
Confidence 45578899999999888432 22345665332 3467899998865 6788999988877652 21 1233
Q ss_pred eEecccCcccccCCccccccCccCcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCc
Q 037197 94 SLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSF 173 (1009)
Q Consensus 94 ~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~ 173 (1009)
.++|+.|.+. .++++.|.+. ..|..+..+..|+.|+|++|.+. .+|..+.++++|++|+|++|.
T Consensus 195 ~l~Ls~~~i~--------------~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~ 258 (727)
T 4b8c_D 195 HKKLSQYSID--------------EDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNS 258 (727)
T ss_dssp ------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSC
T ss_pred cCccCccccc--------------Ccccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCc
Confidence 3444444332 2233334333 33444444555555555555554 344444444444444444444
Q ss_pred cCCcCCccccCccccceeeeccccccccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEeccCccccccCcc
Q 037197 174 FEGSVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIPPA 253 (1009)
Q Consensus 174 ~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 253 (1009)
++ .+|..|++|++|++|+|++|.|+ .+| ..|++|++|++|+|++|.|+ .+|..
T Consensus 259 l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp------------------------~~~~~l~~L~~L~L~~N~l~-~lp~~ 311 (727)
T 4b8c_D 259 LT-ELPAEIKNLSNLRVLDLSHNRLT-SLP------------------------AELGSCFQLKYFYFFDNMVT-TLPWE 311 (727)
T ss_dssp CS-CCCGGGGGGTTCCEEECTTSCCS-SCC------------------------SSGGGGTTCSEEECCSSCCC-CCCSS
T ss_pred Cc-ccChhhhCCCCCCEEeCcCCcCC-ccC------------------------hhhcCCCCCCEEECCCCCCC-ccChh
Confidence 44 44444444444444444444444 334 44444444444444444443 33444
Q ss_pred cCCCCCCcEEEcccCCcCCCCCccccccc-ccccccccccccCCCcchhhhcccCCCeEecccc--------ccCCCCCc
Q 037197 254 LGRLKKLTTVYLYKNNFTGKIPPELGSIT-SLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCN--------QLTGLIPD 324 (1009)
Q Consensus 254 l~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N--------~l~~~~~~ 324 (1009)
|+.+++|++|+|++|.|++.+|..+..+. .+..|+|++|.+++.+|.. |+.|+++.| .+.+..+.
T Consensus 312 ~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~~ 385 (727)
T 4b8c_D 312 FGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQSTEH 385 (727)
T ss_dssp TTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-------------------------------
T ss_pred hhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccccccc
Confidence 45555555555555555544444443321 1223555555555555432 333444444 33333444
Q ss_pred CCCCCCcccEEEccCCccCc
Q 037197 325 KLGELTKLEVLELWKNSLIG 344 (1009)
Q Consensus 325 ~l~~l~~L~~L~L~~N~l~~ 344 (1009)
.+.++..+....++.|-+.+
T Consensus 386 ~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 386 LATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp ----------------CCCG
T ss_pred hhhcccccceeeeecccccc
Confidence 45555666666677776543
No 356
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=3.2e-20 Score=193.25 Aligned_cols=154 Identities=19% Similarity=0.249 Sum_probs=111.3
Q ss_pred EEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCC
Q 037197 430 RLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNS 509 (1009)
Q Consensus 430 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~ 509 (1009)
.+++++|+++ .+|..+. .+|+.|+|++|+|+++.+..|..+++|+.|++++|++++..|..|..+++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 4555555554 3444332 456666666666666666666666666666666666666667777777788888888888
Q ss_pred CCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCccccccccCcCcCCCCCCcEEecCCCccccCC
Q 037197 510 LSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEGPV 586 (1009)
Q Consensus 510 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~i 586 (1009)
|+...+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+..
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 87666666777888888888888888777788888888888888888888887778888888888888888887643
No 357
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=5.8e-20 Score=219.28 Aligned_cols=193 Identities=23% Similarity=0.296 Sum_probs=99.3
Q ss_pred CCeEecccCcccccCCccccccCccCcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccC
Q 037197 92 LSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRG 171 (1009)
Q Consensus 92 L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~ 171 (1009)
+..++++.+.+.+.++ +..|++|++|+|++|.+.. +| .++.+++|+.|+|++|++++..| +..+++|+.|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 3444455555443322 4555666666666655542 22 34455555555555555543322 44444444444444
Q ss_pred CccCCcCCccccCccccceeeeccccccccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEeccCccccccC
Q 037197 172 SFFEGSVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIP 251 (1009)
Q Consensus 172 n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 251 (1009)
|.+.+ +| .++.+++|++|+|++|++++. ..+..+++|+.|+|++|.+++.
T Consensus 97 N~l~~-------------------------l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l-- 146 (605)
T 1m9s_A 97 NKIKD-------------------------LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-- 146 (605)
T ss_dssp SCCCC-------------------------CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--
T ss_pred CCCCC-------------------------Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--
Confidence 44442 11 344444444444444444431 2355555555555555555543
Q ss_pred cccCCCCCCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCc
Q 037197 252 PALGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPD 324 (1009)
Q Consensus 252 ~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 324 (1009)
..++.+++|+.|+|++|.+++..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++....
T Consensus 147 ~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~ 215 (605)
T 1m9s_A 147 TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPIN 215 (605)
T ss_dssp GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCC
T ss_pred hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCccc
Confidence 445555666666666666654433 55566666666666666532 2456666666666666666654333
No 358
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=3.8e-19 Score=186.39 Aligned_cols=155 Identities=20% Similarity=0.245 Sum_probs=117.9
Q ss_pred cEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecC
Q 037197 429 QRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSN 508 (1009)
Q Consensus 429 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N 508 (1009)
+.+++++++++ .+|..+. ++|+.|+|++|+|+++.|..|..+++|+.|++++|+++...+..|..+++|+.|||++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 34555555554 4444332 56666666666666666666666777777777777776555566778888888888888
Q ss_pred CCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCccccccccCcCcCCCCCCcEEecCCCccccCCC
Q 037197 509 SLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEGPVP 587 (1009)
Q Consensus 509 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip 587 (1009)
+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..+
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 888777777888888888888888888 788888888889999999999888877888888899999999998887665
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=7.2e-20 Score=199.43 Aligned_cols=171 Identities=26% Similarity=0.384 Sum_probs=86.7
Q ss_pred CCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCCcCCccccCccccceeeeccccccccCCccCCCCcchhhh
Q 037197 136 KASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSLETI 215 (1009)
Q Consensus 136 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 215 (1009)
.+++|++|++++|.+.+. + .++.+++|++|++++|.+++..+ +.++++|++|+|++|.+++ +| .++.+++|++|
T Consensus 44 ~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEE
T ss_pred hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEE
Confidence 344555555555555422 2 24555555555555555553322 5555555555555555553 22 24555555555
Q ss_pred hcccccccccCCccccCCCCccEEEeccCccccccCcccCCCCCCcEEEcccCCcCCCCCcccccccccccccccccccC
Q 037197 216 ILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQIS 295 (1009)
Q Consensus 216 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 295 (1009)
+|++|++++. ..+..+++|++|++++|++++. ..++.+++|++|++++|.+++..+ +..+++|+.|+|++|.++
T Consensus 118 ~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 118 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp ECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCC
Confidence 5555555432 3355555555555555555533 345555555555555555554322 455555555555555555
Q ss_pred CCcchhhhcccCCCeEeccccccCC
Q 037197 296 GEIPVKLAELKNLQLLNLMCNQLTG 320 (1009)
Q Consensus 296 ~~~~~~l~~l~~L~~L~L~~N~l~~ 320 (1009)
+ ++ .+..+++|+.|++++|+++.
T Consensus 192 ~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 192 D-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp B-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred C-Ch-hhccCCCCCEEECcCCcccC
Confidence 3 22 25555555555555555554
No 360
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=4.5e-19 Score=185.83 Aligned_cols=158 Identities=21% Similarity=0.225 Sum_probs=81.2
Q ss_pred CcCCceeeeEEeCCCCceeEEeccccccccccccccccCCCCCeEecccCcccccCCccccccCccCcccccccccCCCC
Q 037197 51 GLLHCNWTGVWCNSRGFVEKLDLSNMSLNGSVSENIRGLRSLSSLNICCNEFASSLPKSLANLTALKSMDVSQNNFIGSF 130 (1009)
Q Consensus 51 ~~~~C~w~gv~C~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~ 130 (1009)
+.+.|+|++|.|+..+ ++ .+|..+. ++|++|+|++|.+++..|..+.++++|++|+|++|++....
T Consensus 15 ~~~~Cs~~~v~c~~~~-----------l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~ 80 (229)
T 3e6j_A 15 SQCSCSGTTVDCRSKR-----------HA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALP 80 (229)
T ss_dssp TTCEEETTEEECTTSC-----------CS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCCEEeCCEeEccCCC-----------cC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcC
Confidence 4568999999996432 21 2332221 55566666666665555555555555555555555554333
Q ss_pred CCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCCcCCccccCccccceeeeccccccccCCccCCCCc
Q 037197 131 PTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLS 210 (1009)
Q Consensus 131 p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 210 (1009)
+..+..+++|++|+|++|++++..+..+..+++|++|+|++|.++ .+|..+..+++|++|+|++|++++..+..|..++
T Consensus 81 ~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 159 (229)
T 3e6j_A 81 VGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLS 159 (229)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCC
Confidence 344455555555555555555444444444555555555555544 3444444444444444444444433333344444
Q ss_pred chhhhhccccccc
Q 037197 211 SLETIILGYNAFE 223 (1009)
Q Consensus 211 ~L~~L~L~~n~l~ 223 (1009)
+|++|+|++|.+.
T Consensus 160 ~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 160 SLTHAYLFGNPWD 172 (229)
T ss_dssp TCCEEECTTSCBC
T ss_pred CCCEEEeeCCCcc
Confidence 4444444444443
No 361
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=9.8e-20 Score=217.31 Aligned_cols=174 Identities=32% Similarity=0.425 Sum_probs=118.4
Q ss_pred ccCCCCCCeeeccCCccCCcCCccccCccccceeeeccccccccCCccCCCCcchhhhhcccccccccCCccccCCCCcc
Q 037197 158 LGNATSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLR 237 (1009)
Q Consensus 158 l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 237 (1009)
+..+++|+.|++++|.+.. +| .+..+++|+.|+|++|++++..| +..+++|+.|+|++|++++ + ..++.+++|+
T Consensus 39 ~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~ 112 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-L-SSLKDLKKLK 112 (605)
T ss_dssp HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-TTSTTCTTCC
T ss_pred hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-C-hhhccCCCCC
Confidence 3456666666666666653 23 46677777777777777775433 6777777777777777774 2 2577777788
Q ss_pred EEEeccCccccccCcccCCCCCCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCCCeEeccccc
Q 037197 238 YLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQ 317 (1009)
Q Consensus 238 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~ 317 (1009)
+|+|++|.+++. ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|+|++..| +..+++|+.|+|++|+
T Consensus 113 ~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 113 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCC
Confidence 888877777753 4567777777777777777754 456677777777777777775555 6677777777777777
Q ss_pred cCCCCCcCCCCCCcccEEEccCCccCcc
Q 037197 318 LTGLIPDKLGELTKLEVLELWKNSLIGS 345 (1009)
Q Consensus 318 l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 345 (1009)
|++. ..+..+++|+.|+|++|++.+.
T Consensus 187 i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 187 ISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred CCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 7654 3466677777777777766543
No 362
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=1.2e-19 Score=204.29 Aligned_cols=176 Identities=21% Similarity=0.210 Sum_probs=90.5
Q ss_pred ceeecccccccccCCcccccCccccEEEcccCccccccCCccC-CCCcccEEEeecccccccCCcCCcCCCCCcEEeccc
Q 037197 381 TKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLG-NLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISW 459 (1009)
Q Consensus 381 ~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 459 (1009)
+.+++++|.++. +|..+. ..++.|+|++|+|++..+..+. ++++|+.|+|++|+|++..+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 456666666653 343332 2355566666666655555554 555666666666666555555555555555555555
Q ss_pred CcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccc---cccccceeeeecCccccc
Q 037197 460 NHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASI---ASCEKLVSLNLRNNRFSG 536 (1009)
Q Consensus 460 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~ 536 (1009)
|+|+++.+..|..+++|+.|++++|++++..|..|..+++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 55555555555555555555555555555445555555555555555555553333333 334555555555555543
Q ss_pred CCCcccccccc--cceecCCccccc
Q 037197 537 EIPKAVATMPT--LAILDMSNNSLF 559 (1009)
Q Consensus 537 ~~p~~~~~l~~--L~~L~Ls~N~l~ 559 (1009)
..+..+..++. |+.|+|++|++.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 33344444443 244444444443
No 363
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=2.3e-19 Score=195.42 Aligned_cols=173 Identities=25% Similarity=0.388 Sum_probs=106.3
Q ss_pred cccCccCcccccccccCCCCCCCCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCCcCCccccCccccce
Q 037197 111 ANLTALKSMDVSQNNFIGSFPTGLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVPTSFRNLQKLKF 190 (1009)
Q Consensus 111 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~ 190 (1009)
..+++|++|++++|.+... + .++.+++|++|+|++|++++..+ ++++++|++|++++|.+++ + ..+..+++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-L-SSLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-G-GGGTTCTTCCE
T ss_pred hhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-C-hhhccCCCCCE
Confidence 4455555555555555432 2 35555555555555555554332 5566666666666666553 2 23566666666
Q ss_pred eeeccccccccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEeccCccccccCcccCCCCCCcEEEcccCCc
Q 037197 191 LGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNF 270 (1009)
Q Consensus 191 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 270 (1009)
|+|++|++++. +.+..+++|++|++++|++++. ..++.+++|++|++++|++++..+ +..+++|+.|+|++|.+
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcC
Confidence 66666666642 3456666666666666666643 456677777777777777765544 67777777777777777
Q ss_pred CCCCCcccccccccccccccccccCCC
Q 037197 271 TGKIPPELGSITSLAFLDLSDNQISGE 297 (1009)
Q Consensus 271 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 297 (1009)
++ ++ .+..+++|+.|++++|+++..
T Consensus 191 ~~-l~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 191 SD-LR-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CB-CG-GGTTCTTCSEEEEEEEEEECC
T ss_pred CC-Ch-hhccCCCCCEEECcCCcccCC
Confidence 74 33 367777777788877777643
No 364
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=5.1e-19 Score=184.09 Aligned_cols=156 Identities=19% Similarity=0.193 Sum_probs=118.0
Q ss_pred cEEEcccCccccccCCccCCCCcccEEEeecccccccCC-cCCcCCCCCcEEecccCcccccCCCcccCCcccchhcccc
Q 037197 405 VRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIP-DDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASH 483 (1009)
Q Consensus 405 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~ 483 (1009)
+.+++++|.++ .+|..+. +.+++|+|++|+|++..| ..|..+++|+.|+|++|+|+++.+..|..+++|++|++++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 35666666665 3454443 245677777777776544 3466777777777777777777777777778888888888
Q ss_pred CcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCccccccccC
Q 037197 484 NNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIP 563 (1009)
Q Consensus 484 N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 563 (1009)
|++++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 88877777778888888888888888888888888888888888888888888778888888888888888888876544
No 365
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=7.4e-19 Score=182.92 Aligned_cols=152 Identities=16% Similarity=0.252 Sum_probs=95.1
Q ss_pred EEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCc
Q 037197 406 RVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNN 485 (1009)
Q Consensus 406 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~ 485 (1009)
.+++++|.++ .+|..+. ++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+++.|..|.++++|+.|++++|+
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 3444444444 3343332 455556666666555445555555666666666666666556666666666666666666
Q ss_pred ccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCcccccc
Q 037197 486 LQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFG 560 (1009)
Q Consensus 486 l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 560 (1009)
++...+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++..
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 665555556667777777777777776666777777777777777777776666667777777777777777653
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=2.1e-21 Score=230.35 Aligned_cols=188 Identities=21% Similarity=0.229 Sum_probs=91.3
Q ss_pred CCCCceeeccCccccccCCcCccCCCCCceeeccccc-------------ccccCCcccccCccccEEE-cccCcccccc
Q 037197 353 SSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNS-------------FSGTFPVSLSTCKSLVRVR-VQNNLISGTI 418 (1009)
Q Consensus 353 ~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~-------------l~~~~p~~l~~~~~L~~L~-L~~N~l~~~~ 418 (1009)
.++|+.|+|++|.++ .+|..+..+++|+.|++++|. +.+..|..+..+++|+.|+ ++.|.+
T Consensus 348 ~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~---- 422 (567)
T 1dce_A 348 DEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL---- 422 (567)
T ss_dssp TTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH----
T ss_pred CccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc----
Confidence 444555555555554 445555555555555554443 2233344444444444444 333322
Q ss_pred CCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCC
Q 037197 419 PVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACP 498 (1009)
Q Consensus 419 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 498 (1009)
..|..+.+++|.+++..+ ..|+.|+|++|+|++ +|. |..+++|+.|++++|+|+ .+|..|+.++
T Consensus 423 -------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 486 (567)
T 1dce_A 423 -------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALR 486 (567)
T ss_dssp -------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCT
T ss_pred -------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCC
Confidence 123333344444442211 125555555555555 233 555555555555555555 4455555555
Q ss_pred cCcEEEeecCCCCCCCCccccccccceeeeecCcccccCC-CcccccccccceecCCccccccccC
Q 037197 499 SLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEI-PKAVATMPTLAILDMSNNSLFGRIP 563 (1009)
Q Consensus 499 ~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p 563 (1009)
+|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.+ |..++.+++|+.|+|++|+|++.+|
T Consensus 487 ~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 487 CLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp TCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 55555555555553 34 4555555555555555555444 5555555555555555555554443
No 367
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=6.1e-19 Score=198.61 Aligned_cols=176 Identities=21% Similarity=0.176 Sum_probs=120.2
Q ss_pred ceeeccCccccccCCcCccCCCCCceeecccccccccCCcccc-cCccccEEEcccCccccccCCccCCCCcccEEEeec
Q 037197 357 RRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLS-TCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMAN 435 (1009)
Q Consensus 357 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~-~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 435 (1009)
+.+++++|.++ .+|..+. ..++.|+|++|+|++..+..+. ++++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 46677777776 4555443 3467777777777766666666 777777777777777766666677777777777777
Q ss_pred ccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCccccc---ccCCcCcEEEeecCCCCC
Q 037197 436 NNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNEL---QACPSLSVLDLSSNSLSG 512 (1009)
Q Consensus 436 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~---~~l~~L~~LdLs~N~l~~ 512 (1009)
|+|++..+..|..+++|+.|+|++|+|+++.|..|..+++|+.|++++|++++..+..| ..+++|+.|||++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 77776666667777777777777777777767777777777777777777776444444 456777777777777776
Q ss_pred CCCcccccccc--ceeeeecCcccc
Q 037197 513 EIPASIASCEK--LVSLNLRNNRFS 535 (1009)
Q Consensus 513 ~~p~~~~~l~~--L~~L~Ls~N~l~ 535 (1009)
..+..+..++. |+.|+|++|.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 55566666665 366777777765
No 368
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=8.6e-21 Score=225.13 Aligned_cols=104 Identities=32% Similarity=0.375 Sum_probs=50.2
Q ss_pred ccEEEeccCccccccCcccCCCCCCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCCCeEeccc
Q 037197 236 LRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMC 315 (1009)
Q Consensus 236 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~ 315 (1009)
|++|+|++|.+++ +|. ++.+++|+.|+|++|.|+ .+|..++.+++|+.|+|++|+|++ +| .++.+++|++|+|++
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 4555555555543 333 445555555555555554 444445555555555555555543 33 444444455555555
Q ss_pred cccCCCC-CcCCCCCCcccEEEccCCccCc
Q 037197 316 NQLTGLI-PDKLGELTKLEVLELWKNSLIG 344 (1009)
Q Consensus 316 N~l~~~~-~~~l~~l~~L~~L~L~~N~l~~ 344 (1009)
|+|++.+ |..++.+++|+.|+|++|.+++
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~ 547 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 547 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCCC
Confidence 5444443 4444444444444444444443
No 369
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=2.5e-19 Score=219.40 Aligned_cols=181 Identities=23% Similarity=0.238 Sum_probs=74.6
Q ss_pred CCcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCC
Q 037197 394 FPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSI 473 (1009)
Q Consensus 394 ~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 473 (1009)
.+..+..++.|+.|+|++|.+. .+|..+.++++|++|+|++|+|+ .+|..|+.+++|+.|+|++|+|+. +|..|..+
T Consensus 216 ~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~l 292 (727)
T 4b8c_D 216 PKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSC 292 (727)
T ss_dssp ------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSS-CCSSGGGG
T ss_pred ChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCc-cChhhcCC
Confidence 3444444455555555555554 44444445555555555555555 455555555555555555555552 35555555
Q ss_pred cccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCcccccccc-ceeeeecCcccccCCCcccccccccceec
Q 037197 474 PSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEK-LVSLNLRNNRFSGEIPKAVATMPTLAILD 552 (1009)
Q Consensus 474 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 552 (1009)
++|+.|+|++|.|+ .+|..|+.+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.++|.+|.. |+.|+
T Consensus 293 ~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~ 365 (727)
T 4b8c_D 293 FQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIE 365 (727)
T ss_dssp TTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----------
T ss_pred CCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeE
Confidence 55555555555554 34555555566666666666666555555544322 223556666666655543 33444
Q ss_pred CCcc--------ccccccCcCcCCCCCCcEEecCCCcccc
Q 037197 553 MSNN--------SLFGRIPENFGASPALEMLNLSYNKLEG 584 (1009)
Q Consensus 553 Ls~N--------~l~~~~p~~~~~l~~L~~L~ls~N~l~g 584 (1009)
+++| .|.+.++..+.++..+....+++|-+.+
T Consensus 366 l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 366 INTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp ------------------------------------CCCG
T ss_pred eecccccccccCCccccccchhhcccccceeeeecccccc
Confidence 5544 3333334444444555555555555543
No 370
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=1.8e-18 Score=175.84 Aligned_cols=136 Identities=21% Similarity=0.293 Sum_probs=96.5
Q ss_pred ccchhccccCcccCCccc-ccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecC
Q 037197 475 SLQTFMASHNNLQAKIPN-ELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDM 553 (1009)
Q Consensus 475 ~L~~L~l~~N~l~~~~p~-~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 553 (1009)
++++|++++|++++..+. .|..+++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|||
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 445555555555544443 3677778888888888888777888888888888888888888777777888888888888
Q ss_pred CccccccccCcCcCCCCCCcEEecCCCccccCCCCCCcccccCCcccccCcCCCCCC
Q 037197 554 SNNSLFGRIPENFGASPALEMLNLSYNKLEGPVPSNGILMNINPNELIGNAGLCGSV 610 (1009)
Q Consensus 554 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~lcg~~ 610 (1009)
++|+|++.+|..|..+++|++|+|++|++++..|.......+....+.++...|+.|
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 888888888888888888888888888888877642211112223444555566654
No 371
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=2.9e-18 Score=175.28 Aligned_cols=154 Identities=20% Similarity=0.245 Sum_probs=81.3
Q ss_pred ccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccch
Q 037197 399 STCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQT 478 (1009)
Q Consensus 399 ~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 478 (1009)
..+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|+++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~--------------- 101 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVT--------------- 101 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCB---------------
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccC---------------
Confidence 44555555666655555 333 4555555555555555443 1223444445555555555444
Q ss_pred hccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCcccc
Q 037197 479 FMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSL 558 (1009)
Q Consensus 479 L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 558 (1009)
+..+..+..+++|+.|+|++|++++..|..+..+++|++|+|++|++.+.+| .+..+++|+.|++++|++
T Consensus 102 ---------~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i 171 (197)
T 4ezg_A 102 ---------SDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGV 171 (197)
T ss_dssp ---------GGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCC
T ss_pred ---------cccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCC
Confidence 4444455555555555555555555555555555556666666655222344 455666666666666666
Q ss_pred ccccCcCcCCCCCCcEEecCCCccc
Q 037197 559 FGRIPENFGASPALEMLNLSYNKLE 583 (1009)
Q Consensus 559 ~~~~p~~~~~l~~L~~L~ls~N~l~ 583 (1009)
++. + .+..+++|++|++++|++.
T Consensus 172 ~~~-~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 172 HDY-R-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCC-T-TGGGCSSCCEEEECBC---
T ss_pred cCh-H-HhccCCCCCEEEeeCcccC
Confidence 542 2 4556666666666666654
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=1.7e-18 Score=185.53 Aligned_cols=127 Identities=23% Similarity=0.337 Sum_probs=55.0
Q ss_pred ccCCCCCCeeeccCCccCCcCCccccCccccceeeeccccccccCCccCCCCcchhhhhcccccccccCCccccCCCCcc
Q 037197 158 LGNATSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLR 237 (1009)
Q Consensus 158 l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 237 (1009)
++.+++|++|+|++|.+++..+ +.++++|++|+|++|++++ +|. +.. ++|++|+|++|++++. ..++++++|+
T Consensus 59 l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~ 131 (263)
T 1xeu_A 59 MQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLE 131 (263)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCC
T ss_pred HhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCCC--hhhcCccccc
Confidence 3344444444444444432222 4444444444444444442 221 111 4444444444444432 1344444455
Q ss_pred EEEeccCccccccCcccCCCCCCcEEEcccCCcCCCCCcccccccccccccccccccC
Q 037197 238 YLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQIS 295 (1009)
Q Consensus 238 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 295 (1009)
+|++++|++++. ..++.+++|+.|+|++|.+++. ..+..+++|+.|++++|.++
T Consensus 132 ~L~Ls~N~i~~~--~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 132 ILSIRNNKLKSI--VMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp EEECTTSCCCBC--GGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEE
T ss_pred EEECCCCcCCCC--hHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCccc
Confidence 555555544432 1344445555555555555433 33444555555555555554
No 373
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.72 E-value=9.7e-18 Score=178.98 Aligned_cols=139 Identities=16% Similarity=0.173 Sum_probs=105.5
Q ss_pred CCcCceeccCCceEEEEEEECCCCeE--EEEEEcccCCCCh----------------------hhHHHHHHHHHHHhccC
Q 037197 700 VKESNIIGMGGNGIVYKAEFHRPHMV--VAVKKLWRSDNDI----------------------ESGDDLFREVSLLGRLR 755 (1009)
Q Consensus 700 ~~~~~~iG~G~~g~Vyk~~~~~~~~~--vavK~~~~~~~~~----------------------~~~~~~~~E~~~l~~l~ 755 (1009)
|+..+.||+|+||.||+|.+..+|+. ||||+++...... .....+.+|+++++++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 55678999999999999999666888 9999875432110 01124568999999998
Q ss_pred CCce--eeEEeEEEcCCeEEEEEeccCC-C----ChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHH-hcCCCCeEE
Q 037197 756 HRNI--VRLLGYLHNETNVMMVYDYMPN-D----SLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLH-HDCQPPVIH 827 (1009)
Q Consensus 756 Hpni--v~l~~~~~~~~~~~lV~E~~~~-g----sL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH-~~~~~~ivH 827 (1009)
|+++ +.++++ ...++||||+.+ | +|.++... .++..+..++.|++.|++||| +. +|+|
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---givH 194 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELVH 194 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 8754 444443 246899999942 4 66665432 223455678999999999999 87 9999
Q ss_pred eccCCCcEEeCCCCcEEEcccccceec
Q 037197 828 RDIKSNNILLDANLEARIADFGLARMM 854 (1009)
Q Consensus 828 ~dlk~~NIll~~~~~~kl~DfGls~~~ 854 (1009)
|||||+||+++. .++|+|||+|...
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCCHHHEEEcC--cEEEEECcccccC
Confidence 999999999998 9999999999764
No 374
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=1.6e-17 Score=169.77 Aligned_cols=154 Identities=19% Similarity=0.261 Sum_probs=104.4
Q ss_pred ccCCCCCceeecccccccccCCcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCc
Q 037197 374 LCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLS 453 (1009)
Q Consensus 374 l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 453 (1009)
...+++|+.|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|++++..|..+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 356789999999999999 555 69999999999999997763 34788999999999999999988888888888999
Q ss_pred EEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcc
Q 037197 454 FVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNR 533 (1009)
Q Consensus 454 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 533 (1009)
+|++++|++++..+..+..+++|+.|++++|++.+.+| .+..+++|+.|++++|++++. + .+..+++|+.|++++|+
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC-
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCcc
Confidence 99888888877555555555555555555554212222 344444444444444444421 1 33334444444444444
Q ss_pred c
Q 037197 534 F 534 (1009)
Q Consensus 534 l 534 (1009)
+
T Consensus 193 i 193 (197)
T 4ezg_A 193 I 193 (197)
T ss_dssp -
T ss_pred c
Confidence 3
No 375
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.71 E-value=1.4e-17 Score=178.42 Aligned_cols=171 Identities=22% Similarity=0.278 Sum_probs=100.5
Q ss_pred cccccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCcee
Q 037197 280 SITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRL 359 (1009)
Q Consensus 280 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L 359 (1009)
.+.++..+++++|.+++ ++ .+..+++|++|++++|.++.. + .+..+++|+.|++++|++++..+ +..+++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 44556666666666663 33 466666677777777766643 2 45666666666666666665444 5666666666
Q ss_pred eccCccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCccccccCCccCCCCcccEEEeeccccc
Q 037197 360 DASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLT 439 (1009)
Q Consensus 360 ~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 439 (1009)
++++|.+++. |. +.. .+|+.|++++|++++. ..+..+++|+.|++++|++++. + .+..+++|+.|+|++|+++
T Consensus 91 ~L~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKNL-NG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSCC-TT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCCc-Cc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 6666666542 22 112 5666666666666542 2355666666666666666543 2 4555666666666666665
Q ss_pred ccCCcCCcCCCCCcEEecccCccccc
Q 037197 440 GQIPDDISLSTSLSFVDISWNHLESY 465 (1009)
Q Consensus 440 ~~~p~~~~~l~~L~~L~Ls~N~l~~~ 465 (1009)
+. ..+..+++|+.|++++|.++..
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCC
Confidence 44 4455556666666666665543
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=1.7e-17 Score=168.55 Aligned_cols=130 Identities=21% Similarity=0.261 Sum_probs=69.0
Q ss_pred cEEEcccCccccccCCccCCCCcccEEEeecccccccCCc-CCcCCCCCcEEecccCcccccCCCcccCCcccchhcccc
Q 037197 405 VRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPD-DISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASH 483 (1009)
Q Consensus 405 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~ 483 (1009)
+.+++++|+++ .+|..+.. +|++|++++|+|++..+. .+..+++|+.|+|++|+|+++.|..|..+++|++|++++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45666666664 45544432 566666666666544443 255555555555555555555555555555555555555
Q ss_pred CcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccC
Q 037197 484 NNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGE 537 (1009)
Q Consensus 484 N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 537 (1009)
|++++..+..|..+++|+.|||++|+|++..|..|..+++|+.|+|++|.+++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 555544444455555555555555555544444454555555555555555443
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=1.7e-17 Score=184.35 Aligned_cols=265 Identities=11% Similarity=0.088 Sum_probs=139.7
Q ss_pred CCCccEEEeccCccc--cccCcccCCCCCCcEEEcccCCcCCCCCccccc--------ccccccccccccccCCCcchhh
Q 037197 233 LTNLRYLDLAVGSLS--GQIPPALGRLKKLTTVYLYKNNFTGKIPPELGS--------ITSLAFLDLSDNQISGEIPVKL 302 (1009)
Q Consensus 233 l~~L~~L~L~~n~l~--~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~--------l~~L~~L~Ls~N~l~~~~~~~l 302 (1009)
+++|++|||++|++. ......+ +.+..+.+..|.| .+..|.+ +++|+.|+|++ .++...+.+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 555666666666655 2221111 1133344444422 2234445 67777777766 6664555567
Q ss_pred hcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCcc----CccCCccccCCCCCc-eeeccCccccccCCcCccCC
Q 037197 303 AELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSL----IGSLPMRLGQSSPLR-RLDASSNLLSGEIPTGLCDS 377 (1009)
Q Consensus 303 ~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l----~~~~~~~~~~~~~L~-~L~Ls~N~l~~~~~~~l~~l 377 (1009)
.++++|+.|++++|.+..+.+.+|.++.++..+.+..+.. .......|..+..|+ .+++.... .++..
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~---~l~~~---- 193 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMG---KLEDE---- 193 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTC---CHHHH----
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCC---cHHHH----
Confidence 7777777777777776666666676666666555544221 111222233333333 22222110 00000
Q ss_pred CCCceeecccccccccCCcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEec
Q 037197 378 GNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDI 457 (1009)
Q Consensus 378 ~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 457 (1009)
....-....++..+.+.++-...........+++|+.|+|++|+++...+..|..+++|+.|+|
T Consensus 194 ----------------~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l 257 (329)
T 3sb4_A 194 ----------------IMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKL 257 (329)
T ss_dssp ----------------HHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEEC
T ss_pred ----------------HhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEEC
Confidence 0000011233344444433211111100112456666666666666444555666666666666
Q ss_pred ccCcccccCCCcccCCcccc-hhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeee
Q 037197 458 SWNHLESYLPSSILSIPSLQ-TFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNL 529 (1009)
Q Consensus 458 s~N~l~~~~~~~~~~l~~L~-~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~L 529 (1009)
.+| ++.+.+.+|.++++|+ .+++.+ +++.+.+.+|.++++|+.|+++.|+++.+.+..|.++++|+.|+.
T Consensus 258 ~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 258 PHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred Ccc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 666 6666666677777776 777766 565555677777777777777777777666677777777777653
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=1.8e-17 Score=184.18 Aligned_cols=101 Identities=13% Similarity=0.077 Sum_probs=56.7
Q ss_pred CCCceeecccccccccCCcccccCccccEEEcccCccccccCCccCCCCccc-EEEeecccccccCCcCCcCCCCCcEEe
Q 037197 378 GNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQ-RLEMANNNLTGQIPDDISLSTSLSFVD 456 (1009)
Q Consensus 378 ~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~ 456 (1009)
++|+.|++++|+++...+.+|.+|++|+.|++.+| +....+.+|.++++|+ .+++.+ +++..-+..|..+++|+.|+
T Consensus 226 ~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~ 303 (329)
T 3sb4_A 226 PNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVL 303 (329)
T ss_dssp TTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEE
T ss_pred CCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEE
Confidence 44555555555555444455555555555555555 4434444555555565 566655 45544445566666666666
Q ss_pred cccCcccccCCCcccCCcccchhc
Q 037197 457 ISWNHLESYLPSSILSIPSLQTFM 480 (1009)
Q Consensus 457 Ls~N~l~~~~~~~~~~l~~L~~L~ 480 (1009)
++.|+++.+.+.+|.++++|+.++
T Consensus 304 l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 304 ATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp ECSSCCCEECTTTTCTTCCCCEEE
T ss_pred eCCCccCccchhhhcCCcchhhhc
Confidence 666666666666666666666554
No 379
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=3.2e-16 Score=155.59 Aligned_cols=133 Identities=22% Similarity=0.239 Sum_probs=78.0
Q ss_pred CcccEEEeeccccc-ccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEE
Q 037197 426 PSLQRLEMANNNLT-GQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLD 504 (1009)
Q Consensus 426 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~Ld 504 (1009)
++|+.|++++|+++ +.+|..+..+++|+.|++++|.+++. ..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--------------------------~~~~~l~~L~~L~ 77 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--------------------------SNLPKLPKLKKLE 77 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--------------------------SSCCCCSSCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--------------------------hhhccCCCCCEEE
Confidence 45555555555555 44555455555555555555555443 4455556666666
Q ss_pred eecCCCCCCCCccccccccceeeeecCcccccCC-CcccccccccceecCCccccccccC---cCcCCCCCCcEEecCCC
Q 037197 505 LSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEI-PKAVATMPTLAILDMSNNSLFGRIP---ENFGASPALEMLNLSYN 580 (1009)
Q Consensus 505 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~ls~N 580 (1009)
|++|++++.+|..+..+++|+.|+|++|++++.. +..+..+++|+.|++++|++++..+ ..+..+++|++||+++|
T Consensus 78 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n 157 (168)
T 2ell_A 78 LSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDR 157 (168)
T ss_dssp EESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEET
T ss_pred CcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCC
Confidence 6666666555555555666666666666666422 2556666666666666666665544 45666666666666666
Q ss_pred cccc
Q 037197 581 KLEG 584 (1009)
Q Consensus 581 ~l~g 584 (1009)
.++.
T Consensus 158 ~~~~ 161 (168)
T 2ell_A 158 EDQE 161 (168)
T ss_dssp TSCB
T ss_pred Chhh
Confidence 6653
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=3.7e-16 Score=155.10 Aligned_cols=133 Identities=21% Similarity=0.185 Sum_probs=100.9
Q ss_pred CccccEEEcccCccc-cccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchh
Q 037197 401 CKSLVRVRVQNNLIS-GTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTF 479 (1009)
Q Consensus 401 ~~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 479 (1009)
.++|++|++++|+++ +.+|..+..+++|++|+|++|++++. ..+..+++|++|++++|++++.+|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~------------ 88 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLD------------ 88 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCC------------
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHH------------
Confidence 478999999999998 78898899999999999999999965 778888888888888888876444
Q ss_pred ccccCcccCCcccccccCCcCcEEEeecCCCCCCCC-ccccccccceeeeecCcccccCCC---cccccccccceecCCc
Q 037197 480 MASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIP-ASIASCEKLVSLNLRNNRFSGEIP---KAVATMPTLAILDMSN 555 (1009)
Q Consensus 480 ~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~ 555 (1009)
..+..+++|+.|+|++|++++..+ ..+..+++|+.|+|++|.+++..+ ..+..+++|+.||+++
T Consensus 89 ------------~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~ 156 (168)
T 2ell_A 89 ------------MLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYD 156 (168)
T ss_dssp ------------HHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEE
T ss_pred ------------HHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCC
Confidence 344455666666666666664322 566667777777777777775444 4677777777777777
Q ss_pred cccc
Q 037197 556 NSLF 559 (1009)
Q Consensus 556 N~l~ 559 (1009)
|.+.
T Consensus 157 n~~~ 160 (168)
T 2ell_A 157 REDQ 160 (168)
T ss_dssp TTSC
T ss_pred CChh
Confidence 7765
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=1e-15 Score=155.35 Aligned_cols=129 Identities=24% Similarity=0.310 Sum_probs=101.7
Q ss_pred EEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcc
Q 037197 454 FVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNR 533 (1009)
Q Consensus 454 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 533 (1009)
.+++++|+++.+ |..+. ++|++|++++|+++ .+|..|..+++|+.|||++|+|++..+..|.++++|++|+|++|+
T Consensus 14 ~l~~~~~~l~~i-p~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLKVL-PKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCSSC-CSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCCcC-CCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 455555555542 22221 35666666666666 456778888889999999999988888888899999999999999
Q ss_pred cccCCCcccccccccceecCCccccccccCcCcCCCCCCcEEecCCCccccCC
Q 037197 534 FSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASPALEMLNLSYNKLEGPV 586 (1009)
Q Consensus 534 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~i 586 (1009)
|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 99888888999999999999999999887778999999999999999987643
No 382
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=7.9e-16 Score=154.18 Aligned_cols=115 Identities=20% Similarity=0.193 Sum_probs=87.2
Q ss_pred cccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecC
Q 037197 474 PSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDM 553 (1009)
Q Consensus 474 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 553 (1009)
++|+.|++++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+..+++|+.|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 35555555555555555556677777888888888887666666778888888888888888766677788888888888
Q ss_pred CccccccccCcCcCCCCCCcEEecCCCccccCCCC
Q 037197 554 SNNSLFGRIPENFGASPALEMLNLSYNKLEGPVPS 588 (1009)
Q Consensus 554 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~ 588 (1009)
++|++++..+..|..+++|++|+|++|++++.+|.
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 88888877776778888888888888888887763
No 383
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=5e-16 Score=150.81 Aligned_cols=127 Identities=21% Similarity=0.282 Sum_probs=65.4
Q ss_pred CcccEEEeeccccc-ccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEE
Q 037197 426 PSLQRLEMANNNLT-GQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLD 504 (1009)
Q Consensus 426 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~Ld 504 (1009)
++|+.|++++|+++ +.+|..+..+++|+.|++++|++++. ..+..+++|+.|++++|++++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45555666666655 45555555555666666666655553 3444444455555555554444444444555555555
Q ss_pred eecCCCCCC-CCccccccccceeeeecCcccccCCC---cccccccccceecCC
Q 037197 505 LSSNSLSGE-IPASIASCEKLVSLNLRNNRFSGEIP---KAVATMPTLAILDMS 554 (1009)
Q Consensus 505 Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls 554 (1009)
+++|++++. .|..+..+++|+.|+|++|++++..+ ..+..+++|+.||++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 555555532 22444555555555555555554333 344455555555544
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=2.9e-16 Score=152.51 Aligned_cols=129 Identities=19% Similarity=0.217 Sum_probs=117.0
Q ss_pred CCCCcEEecccCccc-ccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceee
Q 037197 449 STSLSFVDISWNHLE-SYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSL 527 (1009)
Q Consensus 449 l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L 527 (1009)
.++|+.|++++|.++ +.+|..+..+++|+.|++++|++++. ..+..+++|+.|+|++|++++.+|..+..+++|+.|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 478999999999998 67888899999999999999999876 789999999999999999998889988889999999
Q ss_pred eecCcccccC-CCcccccccccceecCCccccccccC---cCcCCCCCCcEEecCC
Q 037197 528 NLRNNRFSGE-IPKAVATMPTLAILDMSNNSLFGRIP---ENFGASPALEMLNLSY 579 (1009)
Q Consensus 528 ~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~ls~ 579 (1009)
+|++|++++. .|..++.+++|+.|++++|++++..+ ..+..+++|+.||+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999863 45889999999999999999998877 6789999999999874
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.60 E-value=1.9e-15 Score=151.39 Aligned_cols=132 Identities=18% Similarity=0.227 Sum_probs=83.4
Q ss_pred cEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecC
Q 037197 429 QRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSN 508 (1009)
Q Consensus 429 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N 508 (1009)
+.+++++|+++ .+|..+ .++|+.|++++|+++++.+..|..+++|+.|++++|++++..+..|..+++|+.|+|++|
T Consensus 10 ~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 34444444444 233222 245555555555555555555555666666666666666555555667777777777777
Q ss_pred CCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCccccccccC
Q 037197 509 SLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIP 563 (1009)
Q Consensus 509 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 563 (1009)
+|++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 7776666667777777777777777775555556777777777777777776555
No 386
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.59 E-value=2.3e-15 Score=152.73 Aligned_cols=109 Identities=20% Similarity=0.217 Sum_probs=66.3
Q ss_pred CCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeec
Q 037197 451 SLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLR 530 (1009)
Q Consensus 451 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls 530 (1009)
+|+.|+|++|+|+. +|..|..+++|+.|++++|++++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|+
T Consensus 32 ~l~~L~L~~n~i~~-ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCCS-CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCch-hHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 44445555555543 33445555555555555555555555556666666666666666666666666666777777777
Q ss_pred CcccccCCCcccccccccceecCCcccccc
Q 037197 531 NNRFSGEIPKAVATMPTLAILDMSNNSLFG 560 (1009)
Q Consensus 531 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 560 (1009)
+|+|++..+..|..+++|+.|+|++|++..
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 777765555556667777777777776653
No 387
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.58 E-value=3.7e-14 Score=160.77 Aligned_cols=270 Identities=11% Similarity=0.089 Sum_probs=138.9
Q ss_pred CCCCeeeccCCccCCcCCccccCccccceeeeccccccccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEe
Q 037197 162 TSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDL 241 (1009)
Q Consensus 162 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 241 (1009)
..++.+.+.++ ++.+...+|.+. +|+.+.+.++ ++......|.++ +|+.+.+.. .++.....+|.++++|+.+++
T Consensus 113 ~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 44445554432 332334445543 4555655544 443334445442 455555543 444444455666666666666
Q ss_pred ccCccccccCcccCCCCCCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCCCeEeccccccCCC
Q 037197 242 AVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGL 321 (1009)
Q Consensus 242 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 321 (1009)
++|+++.....+|. ..+|+.+.|..+ ++.....+|.++++|+.+++..| ++.....+|.+ .+|+.+.+ .+.++.+
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I 262 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNI 262 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEE
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEE
Confidence 66655544444444 355666666532 44444555555566666665543 33233344444 45555555 3344444
Q ss_pred CCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccCCcCccCCCCCceeecccccccccCCcccccC
Q 037197 322 IPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTC 401 (1009)
Q Consensus 322 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~ 401 (1009)
...+|.++++|+.+++.+|.+.. +.+....+..|..+.+|+.+++. +.++.....+|.+|
T Consensus 263 ~~~aF~~c~~L~~l~l~~~~~~~-------------------~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c 322 (401)
T 4fdw_A 263 ASRAFYYCPELAEVTTYGSTFND-------------------DPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGN 322 (401)
T ss_dssp CTTTTTTCTTCCEEEEESSCCCC-------------------CTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTC
T ss_pred ChhHhhCCCCCCEEEeCCccccC-------------------CcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCC
Confidence 55555666666666555554330 00012333445555555555555 23444455556666
Q ss_pred ccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCC-CCCcEEecccCccc
Q 037197 402 KSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLS-TSLSFVDISWNHLE 463 (1009)
Q Consensus 402 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~ 463 (1009)
.+|+.+.+.+| ++.....+|.++ +|+.+++.+|.+....+..|..+ ..+..|++..+.+.
T Consensus 323 ~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 323 RKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred CCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 66666666443 443445556666 66666666666654444555555 35666666666554
No 388
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.58 E-value=2.7e-14 Score=161.83 Aligned_cols=269 Identities=11% Similarity=0.101 Sum_probs=125.3
Q ss_pred CCCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEc
Q 037197 258 KKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLEL 337 (1009)
Q Consensus 258 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L 337 (1009)
..++.+.+.+ .++.+...+|.++ +|+.+.+.+| ++.....+|.+. +|+.+.+.. .++.+...+|.++++|+.+++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 4445555533 3443444555553 5666666554 443444455552 466666654 444444555555555555555
Q ss_pred cCCccCccCCccccCCCCCceeeccCccccccCCcCccCCCCCceeecccccccccCCcccccCccccEEEcccCccccc
Q 037197 338 WKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKLILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGT 417 (1009)
Q Consensus 338 ~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~ 417 (1009)
.+|.++......|. ..+|+.+.+..+ +......+|.+|++|+.+++.+| ++..
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-------------------------l~~I~~~aF~~~~~L~~l~l~~~-l~~I 240 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-------------------------LKEIGSQAFLKTSQLKTIEIPEN-VSTI 240 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-------------------------CCEECTTTTTTCTTCCCEECCTT-CCEE
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-------------------------hheehhhHhhCCCCCCEEecCCC-ccCc
Confidence 55555443333333 234444444322 33333444444555555554443 2323
Q ss_pred cCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccC
Q 037197 418 IPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQAC 497 (1009)
Q Consensus 418 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l 497 (1009)
...+|.+ .+|+.+.+ .|.++..-...|..+++|+.+++.+|.+.. +.+....+..|.++
T Consensus 241 ~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~-------------------~~~~~I~~~aF~~c 299 (401)
T 4fdw_A 241 GQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFND-------------------DPEAMIHPYCLEGC 299 (401)
T ss_dssp CTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCC-------------------CTTCEECTTTTTTC
T ss_pred ccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccC-------------------CcccEECHHHhhCC
Confidence 3333444 44555555 233443334445555555555555544430 00001223344444
Q ss_pred CcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCccccccccCcCcCCCC-CCcEEe
Q 037197 498 PSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLFGRIPENFGASP-ALEMLN 576 (1009)
Q Consensus 498 ~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~ 576 (1009)
++|+.++|. |.++.+....|.++.+|+.++|.+| ++..-+..|.++ +|+.+++++|.+....+..|..++ .++.|+
T Consensus 300 ~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~ 376 (401)
T 4fdw_A 300 PKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIR 376 (401)
T ss_dssp TTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEE
T ss_pred ccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEE
Confidence 444444444 2244333444555555555555333 333334445555 555555555555544455555553 455555
Q ss_pred cCCCcc
Q 037197 577 LSYNKL 582 (1009)
Q Consensus 577 ls~N~l 582 (1009)
+..|.+
T Consensus 377 vp~~~~ 382 (401)
T 4fdw_A 377 VPAESV 382 (401)
T ss_dssp ECGGGH
T ss_pred eCHHHH
Confidence 555443
No 389
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.56 E-value=5e-14 Score=160.48 Aligned_cols=158 Identities=11% Similarity=0.006 Sum_probs=83.4
Q ss_pred CCCCCccccCCCCCCeeeccCCccCCcCCccccCccccceeeeccccccccCCccCCCCcchhhhhcccccccccCCccc
Q 037197 151 SGFLPEDLGNATSLESLDFRGSFFEGSVPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEF 230 (1009)
Q Consensus 151 ~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~ 230 (1009)
+.....+|.++++|+++.+..+ ++.+...+|.++++|+.++|.++ ++......|.++++|+.+.+..+ +......+|
T Consensus 60 tsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF 136 (394)
T 4fs7_A 60 VSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAF 136 (394)
T ss_dssp EEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTT
T ss_pred eEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceee
Confidence 3334456777777777777643 55455567777777777777654 44344456667777776666543 333444555
Q ss_pred cCCCCccEEEeccCccccccCcccCCCCCCcEEEcccCCcCCCCCcccccccccccccccccccCCCcchhhhcccCCCe
Q 037197 231 GNLTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDLSDNQISGEIPVKLAELKNLQL 310 (1009)
Q Consensus 231 ~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 310 (1009)
.+...++...... +......+|.++++|+.+.+.++. .......|.++.+|+.+++..| ++......|.++..|+.
T Consensus 137 ~~~~~~~~~~~~~--~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~ 212 (394)
T 4fs7_A 137 KGCDFKEITIPEG--VTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLEN 212 (394)
T ss_dssp TTCCCSEEECCTT--CCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCB
T ss_pred ecccccccccCcc--ccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccce
Confidence 5554333322221 222334456666666666665432 2233445555555555555544 22223334444444444
Q ss_pred Eeccc
Q 037197 311 LNLMC 315 (1009)
Q Consensus 311 L~L~~ 315 (1009)
+.+..
T Consensus 213 i~~~~ 217 (394)
T 4fs7_A 213 MEFPN 217 (394)
T ss_dssp CCCCT
T ss_pred eecCC
Confidence 44443
No 390
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.56 E-value=1.1e-15 Score=168.67 Aligned_cols=141 Identities=13% Similarity=0.081 Sum_probs=100.1
Q ss_pred CCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCC------------hhhHH--------HHHHHHHHHhccCCCce
Q 037197 700 VKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDND------------IESGD--------DLFREVSLLGRLRHRNI 759 (1009)
Q Consensus 700 ~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~------------~~~~~--------~~~~E~~~l~~l~Hpni 759 (1009)
|+..+.||+|+||.||+|.... |+.||||+++..... ..... ...+|...+.++.+.++
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~-G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEK-GKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTT-CCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEecCEeeeCCceEEEEEECCC-CCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 7889999999999999999865 899999987532100 00011 11256677777754443
Q ss_pred eeEEeEEEcCCeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCC
Q 037197 760 VRLLGYLHNETNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDA 839 (1009)
Q Consensus 760 v~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~ 839 (1009)
.-..-+.... .++||||++|++|.++.... ....++.|++.++.|||+. |||||||||.|||+++
T Consensus 176 ~vp~p~~~~~--~~LVME~i~G~~L~~l~~~~----------~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 176 PVPEPIAQSR--HTIVMSLVDALPMRQVSSVP----------DPASLYADLIALILRLAKH---GLIHGDFNEFNILIRE 240 (397)
T ss_dssp SCCCEEEEET--TEEEEECCSCEEGGGCCCCS----------CHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEE
T ss_pred CCCeeeeccC--ceEEEEecCCccHhhhcccH----------HHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeC
Confidence 2221121222 37999999999887664321 1234789999999999998 9999999999999988
Q ss_pred CC----------cEEEcccccceeccc
Q 037197 840 NL----------EARIADFGLARMMLH 856 (1009)
Q Consensus 840 ~~----------~~kl~DfGls~~~~~ 856 (1009)
++ .+.|+||+-+....+
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~~~h 267 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVSMDH 267 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEETTS
T ss_pred CCCcccccccccceEEEEeCCcccCCC
Confidence 76 389999998865433
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.55 E-value=5.9e-17 Score=165.63 Aligned_cols=151 Identities=23% Similarity=0.296 Sum_probs=94.2
Q ss_pred CcccEEEeecccccccCCc------CCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCc
Q 037197 426 PSLQRLEMANNNLTGQIPD------DISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPS 499 (1009)
Q Consensus 426 ~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 499 (1009)
..++.++++.|.++|.+|. .+..+++|+.|++++|++++ +| .+..+++|+.|++++|+++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 3444444444444444443 45555555555555555555 33 5555566666666666665 34555666677
Q ss_pred CcEEEeecCCCCCCCCccccccccceeeeecCcccccCCC-cccccccccceecCCccccccccCcC----------cCC
Q 037197 500 LSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIP-KAVATMPTLAILDMSNNSLFGRIPEN----------FGA 568 (1009)
Q Consensus 500 L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~----------~~~ 568 (1009)
|+.|+|++|++++ +| .+..+++|+.|+|++|++++..+ ..+..+++|+.|++++|++++.+|.. +..
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~ 172 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKR 172 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHh
Confidence 7777777777775 34 56677777777777777764222 46777777777777777777776653 667
Q ss_pred CCCCcEEecCCCccc
Q 037197 569 SPALEMLNLSYNKLE 583 (1009)
Q Consensus 569 l~~L~~L~ls~N~l~ 583 (1009)
++.|+.|| +|.++
T Consensus 173 l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 173 LPNLKKLD--GMPVD 185 (198)
T ss_dssp CSSCSEEC--CGGGT
T ss_pred CCCcEEEC--CcccC
Confidence 77777776 55554
No 392
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.54 E-value=1.8e-13 Score=155.82 Aligned_cols=160 Identities=10% Similarity=-0.008 Sum_probs=74.6
Q ss_pred ccccCCccCCCCcchhhhhcccccccccCCccccCCCCccEEEeccCccccccCcccCCCCCCcEEEcccCCcCCCCCcc
Q 037197 198 LTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKIPPE 277 (1009)
Q Consensus 198 l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~ 277 (1009)
++.....+|.++++|+.+.|.. .++.+...+|.++++|+.+++..+ ++.....+|.++.+|+.+.+..+ +......+
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~a 135 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEA 135 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeeccee
Confidence 3333344566666666666643 344444555666666666666543 44344455555666655554432 23233334
Q ss_pred cccccccccccccccccCCCcchhhhcccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCc
Q 037197 278 LGSITSLAFLDLSDNQISGEIPVKLAELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLR 357 (1009)
Q Consensus 278 ~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~ 357 (1009)
|.++..+.......... ....+|.++++|+.+.+.++. ..+....|.++.+|+.+++..| ++......|..+..|+
T Consensus 136 F~~~~~~~~~~~~~~~~--i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~ 211 (394)
T 4fs7_A 136 FKGCDFKEITIPEGVTV--IGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLE 211 (394)
T ss_dssp TTTCCCSEEECCTTCCE--ECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCC
T ss_pred eecccccccccCccccc--cchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccc
Confidence 44433222222221111 222345555555555554332 2233445555555555555443 3333344444445555
Q ss_pred eeeccCc
Q 037197 358 RLDASSN 364 (1009)
Q Consensus 358 ~L~Ls~N 364 (1009)
.+.+..+
T Consensus 212 ~i~~~~~ 218 (394)
T 4fs7_A 212 NMEFPNS 218 (394)
T ss_dssp BCCCCTT
T ss_pred eeecCCC
Confidence 5444443
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=4.7e-15 Score=148.28 Aligned_cols=133 Identities=17% Similarity=0.173 Sum_probs=68.9
Q ss_pred cCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCc
Q 037197 422 LGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLS 501 (1009)
Q Consensus 422 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 501 (1009)
+.+.++|+.|++++|+++ .+|......++|+.|++++|+|+++ ..|.. +++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~------------------------l~~L~ 67 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPL------------------------LRRLK 67 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCC------------------------CSSCC
T ss_pred cCCcCCceEEEeeCCCCc-hhHHhhhcCCCCCEEECCCCCCCcc--ccccc------------------------CCCCC
Confidence 445566777777777766 3343222223666666666666653 34444 44555
Q ss_pred EEEeecCCCCCCCCccccccccceeeeecCcccccCCCc--ccccccccceecCCccccccccCcC----cCCCCCCcEE
Q 037197 502 VLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPK--AVATMPTLAILDMSNNSLFGRIPEN----FGASPALEML 575 (1009)
Q Consensus 502 ~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L 575 (1009)
.|+|++|+|++..|..+..+++|+.|+|++|+|+ .+|. .+..+++|+.|++++|+++ .+|.. +..++.|+.|
T Consensus 68 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~L 145 (176)
T 1a9n_A 68 TLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVL 145 (176)
T ss_dssp EEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEE
T ss_pred EEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCcccee
Confidence 5555555555333333345555555555555553 3343 4555555555555555554 23332 4555555555
Q ss_pred ecCCCccc
Q 037197 576 NLSYNKLE 583 (1009)
Q Consensus 576 ~ls~N~l~ 583 (1009)
|+++|.++
T Consensus 146 d~~~n~~~ 153 (176)
T 1a9n_A 146 DFQKVKLK 153 (176)
T ss_dssp TTEECCHH
T ss_pred CCCcCCHH
Confidence 55555544
No 394
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=8.7e-15 Score=146.36 Aligned_cols=135 Identities=21% Similarity=0.242 Sum_probs=97.0
Q ss_pred cccccCccccEEEcccCccccccCCccCCCC-cccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCc
Q 037197 396 VSLSTCKSLVRVRVQNNLISGTIPVGLGNLP-SLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIP 474 (1009)
Q Consensus 396 ~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 474 (1009)
..+.++.+|+.|++++|+++. +|. +..+. +|+.|++++|+|++. ..+..+++|+.|++++|+|+++.+..|
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~---- 84 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLD---- 84 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHH----
T ss_pred HhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchh----
Confidence 356778999999999999994 454 55554 999999999999965 678999999999999999987544433
Q ss_pred ccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCc--cccccccceeeeecCcccccCCCcc----ccccccc
Q 037197 475 SLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPA--SIASCEKLVSLNLRNNRFSGEIPKA----VATMPTL 548 (1009)
Q Consensus 475 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L 548 (1009)
..+++|+.|+|++|+++ .+|. .+..+++|+.|+|++|.++ .+|.. +..+++|
T Consensus 85 --------------------~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L 142 (176)
T 1a9n_A 85 --------------------QALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQV 142 (176)
T ss_dssp --------------------HHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTC
T ss_pred --------------------hcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCcc
Confidence 44555555555555554 3333 5556666666666666666 44543 6677777
Q ss_pred ceecCCcccccc
Q 037197 549 AILDMSNNSLFG 560 (1009)
Q Consensus 549 ~~L~Ls~N~l~~ 560 (1009)
+.||+++|.+..
T Consensus 143 ~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 143 RVLDFQKVKLKE 154 (176)
T ss_dssp SEETTEECCHHH
T ss_pred ceeCCCcCCHHH
Confidence 777777776643
No 395
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=1.3e-16 Score=163.18 Aligned_cols=137 Identities=16% Similarity=0.212 Sum_probs=73.0
Q ss_pred ccccCccCcccccccccCCCCCC------CCCCCcCCeEEecCCCCCCCCCCccccCCCCCCeeeccCCccCCcCCcccc
Q 037197 110 LANLTALKSMDVSQNNFIGSFPT------GLGKASGLTSVNASSNNFSGFLPEDLGNATSLESLDFRGSFFEGSVPTSFR 183 (1009)
Q Consensus 110 l~~l~~L~~L~Ls~n~l~~~~p~------~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~ 183 (1009)
+.....++.++++.+.+.+.+|. .++.+++|++|+|++|++++ +| .+.++++|++|++++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45556666667776666666554 44445555555555555543 34 5555555555555555555 3444455
Q ss_pred CccccceeeeccccccccCCccCCCCcchhhhhcccccccccCC-ccccCCCCccEEEeccCccccccC
Q 037197 184 NLQKLKFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIP-AEFGNLTNLRYLDLAVGSLSGQIP 251 (1009)
Q Consensus 184 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~ 251 (1009)
.+++|++|+|++|++++ +| .++.+++|++|++++|++++..+ ..+..+++|++|++++|.+++..|
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 55555555555555553 23 34555555555555555553221 345555555555555555554433
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=7.1e-14 Score=138.64 Aligned_cols=107 Identities=21% Similarity=0.250 Sum_probs=78.8
Q ss_pred hhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCccc
Q 037197 478 TFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNS 557 (1009)
Q Consensus 478 ~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 557 (1009)
.+++++|+++. +|..+. ++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+
T Consensus 13 ~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 34444444442 333332 567778888888887777778888888888888888886666677888888888888888
Q ss_pred cccccCcCcCCCCCCcEEecCCCccccCCC
Q 037197 558 LFGRIPENFGASPALEMLNLSYNKLEGPVP 587 (1009)
Q Consensus 558 l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip 587 (1009)
|++..|..|..+++|++|+|++|++++..+
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 887777778888888888888888877655
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.43 E-value=1.9e-13 Score=135.98 Aligned_cols=106 Identities=17% Similarity=0.202 Sum_probs=75.4
Q ss_pred hccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCcccc
Q 037197 479 FMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSL 558 (1009)
Q Consensus 479 L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 558 (1009)
+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|||++|+|
T Consensus 17 l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l 93 (174)
T 2r9u_A 17 VNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHL 93 (174)
T ss_dssp EECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCcc
Confidence 444444443 2333332 5677777777777777777777788888888888888765555677788888888888888
Q ss_pred ccccCcCcCCCCCCcEEecCCCccccCCC
Q 037197 559 FGRIPENFGASPALEMLNLSYNKLEGPVP 587 (1009)
Q Consensus 559 ~~~~p~~~~~l~~L~~L~ls~N~l~g~ip 587 (1009)
++..+..|..+++|++|+|++|++++..+
T Consensus 94 ~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 94 KSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 87766678888888888888888876543
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=2.7e-13 Score=134.48 Aligned_cols=88 Identities=19% Similarity=0.205 Sum_probs=49.1
Q ss_pred cccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecC
Q 037197 474 PSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDM 553 (1009)
Q Consensus 474 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 553 (1009)
++|+.|++++|+|++..|..|..+++|+.|||++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 33444444444444444455555555556666666665555555555666666666666666544455666666666666
Q ss_pred Cccccccc
Q 037197 554 SNNSLFGR 561 (1009)
Q Consensus 554 s~N~l~~~ 561 (1009)
++|+++..
T Consensus 110 ~~N~~~c~ 117 (170)
T 3g39_A 110 LNNPWDCA 117 (170)
T ss_dssp CSSCBCTT
T ss_pred CCCCCCCC
Confidence 66666544
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.38 E-value=7.9e-13 Score=131.51 Aligned_cols=103 Identities=21% Similarity=0.261 Sum_probs=44.6
Q ss_pred EEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCC
Q 037197 430 RLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNS 509 (1009)
Q Consensus 430 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~ 509 (1009)
.+++++|+++ .+|..+. ++|+.|+|++|+|+++.|..|..+++|+.|++++|+|++..+..|..+++|+.|||++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 4444444443 3343332 444445555554444444444444444444444444443333333444444444444444
Q ss_pred CCCCCCccccccccceeeeecCcccc
Q 037197 510 LSGEIPASIASCEKLVSLNLRNNRFS 535 (1009)
Q Consensus 510 l~~~~p~~~~~l~~L~~L~Ls~N~l~ 535 (1009)
|++..+..|..+++|+.|+|++|.+.
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred cceeCHHHhccccCCCEEEeCCCCcc
Confidence 44333333444444444444444443
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.32 E-value=9.4e-11 Score=133.30 Aligned_cols=329 Identities=12% Similarity=0.104 Sum_probs=131.6
Q ss_pred ccccCCC-CccEEEeccCccccccCcccCCCCCCcEEEcccCC---cCCCCCcccccccccccccccccccCCCcchhhh
Q 037197 228 AEFGNLT-NLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNN---FTGKIPPELGSITSLAFLDLSDNQISGEIPVKLA 303 (1009)
Q Consensus 228 ~~~~~l~-~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~---l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 303 (1009)
.+|.+.. .|+.+.+..+ ++.....+|.++++|+.+.+..|. ++.....+|..+.+|+.+.+..+ ++......|.
T Consensus 57 ~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~ 134 (394)
T 4gt6_A 57 RVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFH 134 (394)
T ss_dssp TTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTT
T ss_pred hhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhh
Confidence 3444442 3555555432 443444455555555555554432 33333444555555555555433 2223334455
Q ss_pred cccCCCeEeccccccCCCCCcCCCCCCcccEEEccCCccCccCCccccCCCCCceeeccCccccccCCcCccCCCCCcee
Q 037197 304 ELKNLQLLNLMCNQLTGLIPDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDASSNLLSGEIPTGLCDSGNLTKL 383 (1009)
Q Consensus 304 ~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 383 (1009)
.+.+|+.+.+..+ +..+....|..+.+|+.+.+..+ ++......|. ...|+.+.+..+... .....|..+..++..
T Consensus 135 ~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~~-i~~~af~~c~~l~~~ 210 (394)
T 4gt6_A 135 HCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKVTR-IGTNAFSECFALSTI 210 (394)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTCCE-ECTTTTTTCTTCCEE
T ss_pred hhcccccccccce-eeeecccceecccccccccccce-eeEecccccc-ccceeEEEECCcccc-cccchhhhcccccee
Confidence 5555555555432 22233445555555555555433 2222222332 234555544433221 333344444444444
Q ss_pred ecccccccccCCcccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCccc
Q 037197 384 ILFNNSFSGTFPVSLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLE 463 (1009)
Q Consensus 384 ~l~~N~l~~~~p~~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 463 (1009)
....+......-..+.......... ..+.....+..+.+. +.++..-...|..+..|+.+.+..+. .
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~-~ 277 (394)
T 4gt6_A 211 TSDSESYPAIDNVLYEKSANGDYAL-----------IRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSV-V 277 (394)
T ss_dssp EECCSSSCBSSSCEEEECTTSCEEE-----------EECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTC-C
T ss_pred cccccccccccceeecccccccccc-----------cccccccccceEEcC-CcceEcccceeeecccccEEeccccc-c
Confidence 4333322211000000000000000 000001111122221 11221222334444444444443322 2
Q ss_pred ccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccc
Q 037197 464 SYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVA 543 (1009)
Q Consensus 464 ~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 543 (1009)
.+...+|.++++|+.+.+. +.++.....+|.++.+|+.++|..+ ++.+...+|.++.+|+.+.|..+ ++..-..+|.
T Consensus 278 ~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~ 354 (394)
T 4gt6_A 278 SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFS 354 (394)
T ss_dssp EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGT
T ss_pred eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhh
Confidence 2333444455555555443 2333333445555555555555543 44344455555556666655433 4423344555
Q ss_pred cccccceecCCccccccccCcCcCCCCCCcEEecCCCc
Q 037197 544 TMPTLAILDMSNNSLFGRIPENFGASPALEMLNLSYNK 581 (1009)
Q Consensus 544 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 581 (1009)
++++|+.+++++|.... ..+.....|+.+.+..|.
T Consensus 355 ~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 355 NCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGS 389 (394)
T ss_dssp TCTTCCEEEESSCHHHH---HTCBCCCCC---------
T ss_pred CCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCC
Confidence 56666666665554321 234445555555555443
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.30 E-value=5.4e-11 Score=135.30 Aligned_cols=132 Identities=16% Similarity=0.097 Sum_probs=80.4
Q ss_pred CCccccCCC-CCCeeeccCCccCCcCCccccCccccceeeecccc---ccccCCccCCCCcchhhhhcccccccccCCcc
Q 037197 154 LPEDLGNAT-SLESLDFRGSFFEGSVPTSFRNLQKLKFLGLSGNN---LTGKIPPELGQLSSLETIILGYNAFEGEIPAE 229 (1009)
Q Consensus 154 ~p~~l~~l~-~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~---l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~ 229 (1009)
...+|.+.. .|+.+.+..+ ++.+...+|.++.+|+.+.+..|. ++......|..+.+|+.+.+..+ ++......
T Consensus 55 g~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~a 132 (394)
T 4gt6_A 55 GDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEA 132 (394)
T ss_dssp CTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTT
T ss_pred CHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhh
Confidence 345666664 5888888754 555667788888888888887764 55444566777777777776544 44355556
Q ss_pred ccCCCCccEEEeccCccccccCcccCCCCCCcEEEcccCCcCCCCCccccccccccccccc
Q 037197 230 FGNLTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNNFTGKIPPELGSITSLAFLDLS 290 (1009)
Q Consensus 230 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 290 (1009)
|.++.+|+.+.+..+ +......+|..+.+|+.+.+..+ ++.....+|.. .+|+.+.+.
T Consensus 133 F~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip 190 (394)
T 4gt6_A 133 FHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIP 190 (394)
T ss_dssp TTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEEC
T ss_pred hhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEEC
Confidence 777777777777543 33344556666666666666543 33233333322 345554443
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.29 E-value=3.3e-14 Score=159.62 Aligned_cols=158 Identities=16% Similarity=0.182 Sum_probs=73.0
Q ss_pred CCeEEecCCCCCCCCCCccccCC-----CCCCeeeccCCccCCcCCccc-cCccccceeeeccccccccCCccC-----C
Q 037197 139 GLTSVNASSNNFSGFLPEDLGNA-----TSLESLDFRGSFFEGSVPTSF-RNLQKLKFLGLSGNNLTGKIPPEL-----G 207 (1009)
Q Consensus 139 ~L~~L~Ls~n~l~~~~p~~l~~l-----~~L~~L~L~~n~~~~~~p~~~-~~l~~L~~L~L~~n~l~~~~p~~l-----~ 207 (1009)
.|++|+|++|.++......+... ++|++|+|++|.++......+ ..+++|++|+|++|.++......+ .
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~ 152 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH 152 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHS
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHh
Confidence 45555555555543322222221 456666666665543322222 234556666666666653322222 1
Q ss_pred CCcchhhhhccccccccc----CCccccCCCCccEEEeccCcccccc----CcccCCCCCCcEEEcccCCcCCCCC----
Q 037197 208 QLSSLETIILGYNAFEGE----IPAEFGNLTNLRYLDLAVGSLSGQI----PPALGRLKKLTTVYLYKNNFTGKIP---- 275 (1009)
Q Consensus 208 ~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~----~~~l~~l~~L~~L~L~~n~l~~~~~---- 275 (1009)
..++|++|+|++|.|+.. ++..+..+++|++|+|++|.+++.. +..+...++|++|+|++|.|++...
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~ 232 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALA 232 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHH
T ss_pred cCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHH
Confidence 234455555555555432 2223344555666666666555321 3334444555555555555543211
Q ss_pred cccccccccccccccccccCC
Q 037197 276 PELGSITSLAFLDLSDNQISG 296 (1009)
Q Consensus 276 ~~~~~l~~L~~L~Ls~N~l~~ 296 (1009)
..+...++|++|+|++|.|++
T Consensus 233 ~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 233 RAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHhCCCCCEEeccCCCCCH
Confidence 122233445555555554443
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.27 E-value=3.9e-14 Score=159.03 Aligned_cols=164 Identities=15% Similarity=0.135 Sum_probs=77.4
Q ss_pred CCCCeEecccCcccccCCcccccc-----CccCcccccccccCCCCCCCCC-CCcCCeEEecCCCCCCCCCCcccc----
Q 037197 90 RSLSSLNICCNEFASSLPKSLANL-----TALKSMDVSQNNFIGSFPTGLG-KASGLTSVNASSNNFSGFLPEDLG---- 159 (1009)
Q Consensus 90 ~~L~~L~L~~n~~~~~~~~~l~~l-----~~L~~L~Ls~n~l~~~~p~~l~-~l~~L~~L~Ls~n~l~~~~p~~l~---- 159 (1009)
++|++|+|++|.++......+..+ ++|++|+|++|.++......+. .+.+|++|+|++|+++......++
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 456666666666655443344333 4566666666665433222222 234556666666655533333321
Q ss_pred -CCCCCCeeeccCCccCCc----CCccccCccccceeeeccccccccCCccCCCCcchhhhhcccccccccCCccccCCC
Q 037197 160 -NATSLESLDFRGSFFEGS----VPTSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFGNLT 234 (1009)
Q Consensus 160 -~l~~L~~L~L~~n~~~~~----~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 234 (1009)
..++|++|+|++|.++.. ++..+..+++|++|+|++|.|+..... .++..+...+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~--------------------~L~~~L~~~~ 211 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLE--------------------LLAAQLDRNR 211 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHH--------------------HHHHHGGGCS
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHH--------------------HHHHHHhcCC
Confidence 234555555555555432 222234445555555555554421100 1123344444
Q ss_pred CccEEEeccCccccc----cCcccCCCCCCcEEEcccCCcCCC
Q 037197 235 NLRYLDLAVGSLSGQ----IPPALGRLKKLTTVYLYKNNFTGK 273 (1009)
Q Consensus 235 ~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~L~~n~l~~~ 273 (1009)
+|++|+|++|.+++. ++..+...++|++|+|++|.|++.
T Consensus 212 ~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 212 QLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp CCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred CcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 555555555555432 222333345555555555555543
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.23 E-value=8e-12 Score=139.66 Aligned_cols=103 Identities=20% Similarity=0.197 Sum_probs=64.6
Q ss_pred ccccC-cccCCcccccccCCcCcEEEeec-CCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCccc
Q 037197 480 MASHN-NLQAKIPNELQACPSLSVLDLSS-NSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNS 557 (1009)
Q Consensus 480 ~l~~N-~l~~~~p~~~~~l~~L~~LdLs~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 557 (1009)
+++++ +|+. +|. +..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.+|++|+.|||++|+
T Consensus 14 ~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 91 (347)
T 2ifg_A 14 RCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (347)
T ss_dssp ECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred EcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCc
Confidence 44444 4443 444 55666666666664 66666555666666666666666666666666666666666666666666
Q ss_pred cccccCcCcCCCCCCcEEecCCCccccC
Q 037197 558 LFGRIPENFGASPALEMLNLSYNKLEGP 585 (1009)
Q Consensus 558 l~~~~p~~~~~l~~L~~L~ls~N~l~g~ 585 (1009)
|++.+|..|..++ |+.|+|++|+|...
T Consensus 92 l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 92 LESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp CSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred cceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 6665555555554 67777777776653
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.20 E-value=1.9e-11 Score=136.58 Aligned_cols=102 Identities=21% Similarity=0.264 Sum_probs=58.3
Q ss_pred EEeecc-cccccCCcCCcCCCCCcEEeccc-CcccccCCCcccCCcccchhccccCcccCCcccccccCCcCcEEEeecC
Q 037197 431 LEMANN-NLTGQIPDDISLSTSLSFVDISW-NHLESYLPSSILSIPSLQTFMASHNNLQAKIPNELQACPSLSVLDLSSN 508 (1009)
Q Consensus 431 L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N 508 (1009)
++++++ +|+ .+|. +..+++|+.|+|++ |+|+++.+..|..+++|+.|+|++|+|++..|..|..+++|+.|||++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 455554 454 3444 55555555555553 5555555555555555555555555555555555666666666666666
Q ss_pred CCCCCCCccccccccceeeeecCcccc
Q 037197 509 SLSGEIPASIASCEKLVSLNLRNNRFS 535 (1009)
Q Consensus 509 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 535 (1009)
+|++..+..|..+. |+.|+|++|.|.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 66655444454444 666666666665
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.11 E-value=1.8e-10 Score=123.09 Aligned_cols=144 Identities=14% Similarity=0.070 Sum_probs=110.3
Q ss_pred HHhcCCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccC-CCceeeEEeEEEcCCeEEE
Q 037197 696 ILACVKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLR-HRNIVRLLGYLHNETNVMM 774 (1009)
Q Consensus 696 ~~~~~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~l 774 (1009)
....|+....++.|+.+.||++... +..+++|....... .....+.+|+++++.+. +..+.++++++.+.+..|+
T Consensus 12 ~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 12 LIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccC--CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 4456777777888888999999754 57899999854211 11234668999998884 6788899999998889999
Q ss_pred EEeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhc----------------------------------
Q 037197 775 VYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHD---------------------------------- 820 (1009)
Q Consensus 775 V~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~---------------------------------- 820 (1009)
||||++|.++.+..... .....++.+++++++.||+.
T Consensus 88 v~e~i~G~~l~~~~~~~---------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (263)
T 3tm0_A 88 LMSEADGVLCSEEYEDE---------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW 158 (263)
T ss_dssp EEECCSSEEHHHHCCTT---------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGG
T ss_pred EEEecCCeehhhccCCc---------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccc
Confidence 99999999998764211 12235788999999999981
Q ss_pred ----------------------CCCCeEEeccCCCcEEeCCCCcEEEcccccce
Q 037197 821 ----------------------CQPPVIHRDIKSNNILLDANLEARIADFGLAR 852 (1009)
Q Consensus 821 ----------------------~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~ 852 (1009)
..+.++|+|++|.||+++++..+.|+||+.+.
T Consensus 159 ~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp STTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01368999999999999876666799999774
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.98 E-value=1.4e-08 Score=114.73 Aligned_cols=144 Identities=13% Similarity=0.148 Sum_probs=75.0
Q ss_pred ccccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCccc
Q 037197 397 SLSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSL 476 (1009)
Q Consensus 397 ~l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 476 (1009)
.+..+.+|+.+.+..+ +.......+.+...|+.+.+..+ ++..-...+..+.+|+.+.+..+ ++.+...+|.++.+|
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L 288 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNL 288 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTC
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccc
Confidence 3444444444444333 22233334444555555555443 33233344555555555555432 444444555666666
Q ss_pred chhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccc
Q 037197 477 QTFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATM 545 (1009)
Q Consensus 477 ~~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 545 (1009)
+.+.+.++.++.....+|.++.+|+.++|..+ ++.+...+|.++.+|+.+.+..+ ++..-..+|.+.
T Consensus 289 ~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 289 TKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp CEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred ccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 66666655555445556666666666666544 55444566667777777776544 442334455544
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.97 E-value=5.7e-11 Score=131.94 Aligned_cols=202 Identities=17% Similarity=0.222 Sum_probs=100.3
Q ss_pred CceeEEecccccccc-c-------cccccccCCCCCeEecccCccc---------ccCCccccccCccCcccccccccCC
Q 037197 66 GFVEKLDLSNMSLNG-S-------VSENIRGLRSLSSLNICCNEFA---------SSLPKSLANLTALKSMDVSQNNFIG 128 (1009)
Q Consensus 66 ~~v~~l~l~~~~l~~-~-------~~~~l~~l~~L~~L~L~~n~~~---------~~~~~~l~~l~~L~~L~Ls~n~l~~ 128 (1009)
.+|+.|.+...+..| . +.+++..+++|+.|.+..+... +.+...+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 467777777655542 2 1334556778888887654321 123445566677777777766211
Q ss_pred CCCCCCCCCcCCeEEecCCCCCCCCCCcccc--CCCCCCeeeccC--CccCCc-----CCccccCccccceeeecccccc
Q 037197 129 SFPTGLGKASGLTSVNASSNNFSGFLPEDLG--NATSLESLDFRG--SFFEGS-----VPTSFRNLQKLKFLGLSGNNLT 199 (1009)
Q Consensus 129 ~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~--~l~~L~~L~L~~--n~~~~~-----~p~~~~~l~~L~~L~L~~n~l~ 199 (1009)
.++. + .+++|++|+|..|.+.......++ .+++|++|+|+. |...+. +...+.
T Consensus 186 ~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~---------------- 247 (362)
T 2ra8_A 186 SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS---------------- 247 (362)
T ss_dssp BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC----------------
T ss_pred eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHh----------------
Confidence 1222 2 256666666666665433333333 456666666542 111111 000111
Q ss_pred ccCCccCCCCcchhhhhcccccccccCCcccc---CCCCccEEEeccCccccc----cCcccCCCCCCcEEEcccCCcCC
Q 037197 200 GKIPPELGQLSSLETIILGYNAFEGEIPAEFG---NLTNLRYLDLAVGSLSGQ----IPPALGRLKKLTTVYLYKNNFTG 272 (1009)
Q Consensus 200 ~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~---~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~L~~n~l~~ 272 (1009)
...+++|++|+|.+|.+.+..+..+. .+++|++|+|+.|.+++. ++..+..+++|+.|+|++|.++.
T Consensus 248 ------~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 248 ------KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp ------TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred ------cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 01234555555555554433222222 355666666666666553 22333445667777777776654
Q ss_pred CCCcccccccccccccccccc
Q 037197 273 KIPPELGSITSLAFLDLSDNQ 293 (1009)
Q Consensus 273 ~~~~~~~~l~~L~~L~Ls~N~ 293 (1009)
.....+...- ...+++++++
T Consensus 322 ~~~~~l~~al-g~~~~~~~~~ 341 (362)
T 2ra8_A 322 EMKKELQKSL-PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHHHC-CSEEECCSBC
T ss_pred HHHHHHHHHc-CCEEEecCCc
Confidence 3322222200 2446666665
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.96 E-value=2e-08 Score=113.43 Aligned_cols=166 Identities=13% Similarity=0.134 Sum_probs=103.2
Q ss_pred cccCccccEEEcccCccccccCCccCCCCcccEEEeecccccccCCcCCcCCCCCcEEecccCcccccCCCcccCCcccc
Q 037197 398 LSTCKSLVRVRVQNNLISGTIPVGLGNLPSLQRLEMANNNLTGQIPDDISLSTSLSFVDISWNHLESYLPSSILSIPSLQ 477 (1009)
Q Consensus 398 l~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 477 (1009)
+..+..+..+.+..+... .....+....+|+.+.+..+ ++......+..+..|+.+.+..+ ++.+...+|.+..+|+
T Consensus 190 ~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~ 266 (379)
T 4h09_A 190 YPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALK 266 (379)
T ss_dssp CCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCC
T ss_pred ccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhc
Confidence 334445555555443322 44455666777888877654 34344556777788888887665 6666666777777777
Q ss_pred hhccccCcccCCcccccccCCcCcEEEeecCCCCCCCCccccccccceeeeecCcccccCCCcccccccccceecCCccc
Q 037197 478 TFMASHNNLQAKIPNELQACPSLSVLDLSSNSLSGEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNS 557 (1009)
Q Consensus 478 ~L~l~~N~l~~~~p~~~~~l~~L~~LdLs~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 557 (1009)
.+.+..+ +.......|.++.+|+.+++.++.++.+....|.++.+|+.++|..+ ++..-..+|.++.+|+.+.+..+
T Consensus 267 ~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~- 343 (379)
T 4h09_A 267 TLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS- 343 (379)
T ss_dssp EEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-
T ss_pred ccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-
Confidence 7776543 44444556777777777777777777555667777777777777644 54333456777777777776544
Q ss_pred cccccCcCcCCC
Q 037197 558 LFGRIPENFGAS 569 (1009)
Q Consensus 558 l~~~~p~~~~~l 569 (1009)
++..-..+|.+.
T Consensus 344 v~~I~~~aF~~c 355 (379)
T 4h09_A 344 ITLIESGAFEGS 355 (379)
T ss_dssp CCEECTTTTTTS
T ss_pred cCEEchhHhhCC
Confidence 443334445443
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.92 E-value=1.7e-10 Score=128.07 Aligned_cols=137 Identities=18% Similarity=0.231 Sum_probs=64.0
Q ss_pred ccccCccccceeeeccccccccCCccCCCCcchhhhhcccccccccCCcccc--CCCCccEEEeccC--ccccc-----c
Q 037197 180 TSFRNLQKLKFLGLSGNNLTGKIPPELGQLSSLETIILGYNAFEGEIPAEFG--NLTNLRYLDLAVG--SLSGQ-----I 250 (1009)
Q Consensus 180 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~n--~l~~~-----~ 250 (1009)
..+..+++|+.|+|++|.-. .++. +. +++|++|+|..|.++......++ .+++|++|+|+.+ ...+. +
T Consensus 166 ~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l 242 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVF 242 (362)
T ss_dssp HHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGT
T ss_pred HHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHH
Confidence 44455666777777665211 1222 22 56666666666665543333343 5667777776431 11111 0
Q ss_pred Cccc--CCCCCCcEEEcccCCcCCCCCcccc---cccccccccccccccCCCc----chhhhcccCCCeEeccccccC
Q 037197 251 PPAL--GRLKKLTTVYLYKNNFTGKIPPELG---SITSLAFLDLSDNQISGEI----PVKLAELKNLQLLNLMCNQLT 319 (1009)
Q Consensus 251 ~~~l--~~l~~L~~L~L~~n~l~~~~~~~~~---~l~~L~~L~Ls~N~l~~~~----~~~l~~l~~L~~L~L~~N~l~ 319 (1009)
...+ ..+++|+.|+|++|.+.+..+..+. .+++|++|+|+.|.+++.. +..+..+++|+.|+|++|.|+
T Consensus 243 ~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 243 RPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp GGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 0111 1345566666665555432222221 2445555555555554322 122233445555555555444
No 411
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.90 E-value=2.1e-09 Score=114.55 Aligned_cols=129 Identities=16% Similarity=0.121 Sum_probs=94.7
Q ss_pred ccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCc--eeeEEeEEEcCCeEEEEEeccCCCCh
Q 037197 707 GMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRN--IVRLLGYLHNETNVMMVYDYMPNDSL 784 (1009)
Q Consensus 707 G~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpn--iv~l~~~~~~~~~~~lV~E~~~~gsL 784 (1009)
+.|..+.||++... +|..+++|..... ....+.+|+++++.+.+.+ +.+++++...++..++||||++|.++
T Consensus 29 ~gg~~~~v~~~~~~-~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l 102 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQ-GRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL 102 (264)
T ss_dssp CTTSSCEEEEEECT-TSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred cCCCCceEEEEecC-CCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCccc
Confidence 45666999999754 4678999987432 1234568899988885434 56689998888889999999999988
Q ss_pred hhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 037197 785 GEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDC------------------------------------------- 821 (1009)
Q Consensus 785 ~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~------------------------------------------- 821 (1009)
. ... .+ ...++.++++.++.||+..
T Consensus 103 ~--~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (264)
T 1nd4_A 103 L--SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAEL 170 (264)
T ss_dssp T--TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHH
T ss_pred C--cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHH
Confidence 4 211 11 1246777888888888641
Q ss_pred ------------CCCeEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 822 ------------QPPVIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 822 ------------~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
...++|+|++|.||++++++.+.|+|||.+..
T Consensus 171 ~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 171 FARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998776677999998753
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.85 E-value=7.3e-09 Score=116.04 Aligned_cols=142 Identities=12% Similarity=0.174 Sum_probs=104.5
Q ss_pred CceeccCCceEEEEEEECCCCeEEEEEEcc--cCCCChhhHHHHHHHHHHHhccC--CCceeeEEeEEEcC---CeEEEE
Q 037197 703 SNIIGMGGNGIVYKAEFHRPHMVVAVKKLW--RSDNDIESGDDLFREVSLLGRLR--HRNIVRLLGYLHNE---TNVMMV 775 (1009)
Q Consensus 703 ~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~E~~~l~~l~--Hpniv~l~~~~~~~---~~~~lV 775 (1009)
.+.++.|.++.||++...+ ..+++|+.. ... .......+.+|+++++.+. +..+++++.++.+. +..++|
T Consensus 43 ~~~l~~G~sn~~y~v~~~~--~~~vlr~~~~p~~~-~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG--QTYVMRAKPGPKSK-LLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp EEECCC-CCSCEEEEECSS--CEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred EEEcCCcccceEEEEEECC--ceEEEEeCCCCCCC-CCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 4568999999999988654 578888874 221 1112345668999999886 45688999998776 447999
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcC----------------------------------
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDC---------------------------------- 821 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~---------------------------------- 821 (1009)
|||++|..+.+.... .++..++..++.++++.|+.||+..
T Consensus 120 me~v~G~~l~~~~~~------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (359)
T 3dxp_A 120 MEFVSGRVLWDQSLP------GMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETES 193 (359)
T ss_dssp EECCCCBCCCCTTCT------TCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSC
T ss_pred EEecCCeecCCCccc------cCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcC
Confidence 999999887542211 1566777889999999999999731
Q ss_pred ---------------------CCCeEEeccCCCcEEeCCCCc--EEEccccccee
Q 037197 822 ---------------------QPPVIHRDIKSNNILLDANLE--ARIADFGLARM 853 (1009)
Q Consensus 822 ---------------------~~~ivH~dlk~~NIll~~~~~--~kl~DfGls~~ 853 (1009)
.+.++|+|+++.||+++.++. +.|+||+.+..
T Consensus 194 ~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 194 IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred ChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 68999998864
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.82 E-value=4.4e-11 Score=125.82 Aligned_cols=143 Identities=18% Similarity=0.168 Sum_probs=62.5
Q ss_pred CceeeeEEeCCCC-ceeEEeccc---cccccccc-cccccCCCCCeEecccCcccccCC-ccccccCccCc--ccccccc
Q 037197 54 HCNWTGVWCNSRG-FVEKLDLSN---MSLNGSVS-ENIRGLRSLSSLNICCNEFASSLP-KSLANLTALKS--MDVSQNN 125 (1009)
Q Consensus 54 ~C~w~gv~C~~~~-~v~~l~l~~---~~l~~~~~-~~l~~l~~L~~L~L~~n~~~~~~~-~~l~~l~~L~~--L~Ls~n~ 125 (1009)
-|+|.|+.|+..+ +|..+-..+ ..+.+.+. +.+..++. .|..++|.-++.+. ..+...+.|+. ++++.|.
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 4889999998653 565554433 23333332 22222222 22222333222221 12444444554 4555552
Q ss_pred cC---CCCCCCCCCCcCCeEEecCCCCCCC--CCCccccCCCCCCeeeccCCccCCcCCccccCcc--ccceeeeccccc
Q 037197 126 FI---GSFPTGLGKASGLTSVNASSNNFSG--FLPEDLGNATSLESLDFRGSFFEGSVPTSFRNLQ--KLKFLGLSGNNL 198 (1009)
Q Consensus 126 l~---~~~p~~l~~l~~L~~L~Ls~n~l~~--~~p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~--~L~~L~L~~n~l 198 (1009)
.. +.++....++++|++|+|++|+|++ .+|..+..+++|+.|+|++|.+.+. ..+..+. +|++|+|++|.+
T Consensus 155 ~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl 232 (267)
T 3rw6_A 155 RSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSL 232 (267)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTT
T ss_pred HHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcC
Confidence 21 1111111234455555555555554 3334444555555555555555432 1122222 444444444444
Q ss_pred cc
Q 037197 199 TG 200 (1009)
Q Consensus 199 ~~ 200 (1009)
.+
T Consensus 233 ~~ 234 (267)
T 3rw6_A 233 CD 234 (267)
T ss_dssp GG
T ss_pred cc
Confidence 43
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.71 E-value=5.5e-09 Score=114.07 Aligned_cols=184 Identities=23% Similarity=0.237 Sum_probs=119.5
Q ss_pred CceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccC-CCc--eeeEEeEEEcCC---eEEEEE
Q 037197 703 SNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLR-HRN--IVRLLGYLHNET---NVMMVY 776 (1009)
Q Consensus 703 ~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-Hpn--iv~l~~~~~~~~---~~~lV~ 776 (1009)
.+.++.|....||++. ..+++|+... ......+.+|+++++.+. +.. +.+++.+....+ ..|+||
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~----~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKH----SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESS----HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCC----cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence 4568999999999873 3588888632 233456668999998883 332 445555544333 348899
Q ss_pred eccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhc------------------------------------
Q 037197 777 DYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHD------------------------------------ 820 (1009)
Q Consensus 777 E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~------------------------------------ 820 (1009)
||++|.++.+.... .++..++..++.++++.++.||+.
T Consensus 96 ~~i~G~~l~~~~~~------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 96 TKIKGVPLTPLLLN------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp ECCCCEECCHHHHH------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred cccCCeECCccccc------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 99999888754321 145666677888888888888861
Q ss_pred -------------------CCCCeEEeccCCCcEEeCC--CCcEEEcccccceecccCCCceeeec--------------
Q 037197 821 -------------------CQPPVIHRDIKSNNILLDA--NLEARIADFGLARMMLHKNETVSMVA-------------- 865 (1009)
Q Consensus 821 -------------------~~~~ivH~dlk~~NIll~~--~~~~kl~DfGls~~~~~~~~~~~~~~-------------- 865 (1009)
..+.++|+|++|.||++++ +..+.|+||+.+..- +.........
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~ 248 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS-DPDNDFISLMEDDEEYGMEFVSKI 248 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE-CTTHHHHTTCCTTTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC-ChHHHHHHHHhhccccCHHHHHHH
Confidence 1246899999999999998 456789999988653 2211100000
Q ss_pred -ccCcccC-CcccCCCCCCcccchHhHHHHHHHHHhCCCCC
Q 037197 866 -GSYGYIA-PEYGYTLKVDEKSDIYSFGVVLLELLTGKMPL 904 (1009)
Q Consensus 866 -gt~~y~a-PE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf 904 (1009)
...++.. |+... ......+.|++|.++|++.+|+.+|
T Consensus 249 l~~Y~~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 249 LNHYKHKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHTCSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHcCCCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 0001111 22111 1122368999999999999999765
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.57 E-value=1.1e-08 Score=107.42 Aligned_cols=105 Identities=25% Similarity=0.277 Sum_probs=69.8
Q ss_pred ccCCcccch--hccccCccc---CCcccccccCCcCcEEEeecCCCCC--CCCccccccccceeeeecCcccccCCCccc
Q 037197 470 ILSIPSLQT--FMASHNNLQ---AKIPNELQACPSLSVLDLSSNSLSG--EIPASIASCEKLVSLNLRNNRFSGEIPKAV 542 (1009)
Q Consensus 470 ~~~l~~L~~--L~l~~N~l~---~~~p~~~~~l~~L~~LdLs~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 542 (1009)
|...+.|.. ++++.|+.. +.++....++++|+.|+||+|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 334455554 556666432 2222233567888888888888887 4456677888888888888888754 334
Q ss_pred cccc--ccceecCCccccccccCc-------CcCCCCCCcEEe
Q 037197 543 ATMP--TLAILDMSNNSLFGRIPE-------NFGASPALEMLN 576 (1009)
Q Consensus 543 ~~l~--~L~~L~Ls~N~l~~~~p~-------~~~~l~~L~~L~ 576 (1009)
..+. +|+.|+|++|++++.+|+ .+..+|+|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 4444 788888888888876663 356677777775
No 416
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.48 E-value=2.8e-07 Score=101.17 Aligned_cols=136 Identities=19% Similarity=0.187 Sum_probs=97.4
Q ss_pred CCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCC----CceeeEEeEEEcCCeEEEE
Q 037197 700 VKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRH----RNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 700 ~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H----pniv~l~~~~~~~~~~~lV 775 (1009)
+...+.++.|....||++ +..+++|+... ......+.+|+++++.+.+ ..+.+++++ +..++|
T Consensus 39 i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~----~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lv 105 (320)
T 3r70_A 39 INELRYLSSGDDSDTFLC-----NEQYVVKVPKR----DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNI 105 (320)
T ss_dssp CSCEEEEEECSSEEEEEE-----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEE
T ss_pred eEEEEeCCCCCCceEEEE-----CCEEEEEeCCc----HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEE
Confidence 455678999999999998 44688887622 2223456689998888865 234555555 456899
Q ss_pred EeccCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcC----------------------------------
Q 037197 776 YDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDC---------------------------------- 821 (1009)
Q Consensus 776 ~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~---------------------------------- 821 (1009)
|||++|.++.+..... ++..++..++.++++.++.||+..
T Consensus 106 me~i~G~~l~~~~~~~------l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (320)
T 3r70_A 106 MKYIKGERITYEQYHK------LSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQ 179 (320)
T ss_dssp EECCCCBCCCHHHHTT------SCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EeecCCcccccccccc------CCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcc
Confidence 9999999887433111 345556667777777777777531
Q ss_pred --------------------------CCCeEEeccCCCcEEeCCCCcEEEcccccceec
Q 037197 822 --------------------------QPPVIHRDIKSNNILLDANLEARIADFGLARMM 854 (1009)
Q Consensus 822 --------------------------~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~ 854 (1009)
.+.++|+|++|.||+++.+..+.|+||+.+..-
T Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 180 LLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 124599999999999998766799999998653
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.40 E-value=8.6e-09 Score=103.23 Aligned_cols=118 Identities=19% Similarity=0.147 Sum_probs=67.8
Q ss_pred cccccccCCCCCeEecccC-ccccc----CCccccccCccCcccccccccCCCC----CCCCCCCcCCeEEecCCCCCCC
Q 037197 82 VSENIRGLRSLSSLNICCN-EFASS----LPKSLANLTALKSMDVSQNNFIGSF----PTGLGKASGLTSVNASSNNFSG 152 (1009)
Q Consensus 82 ~~~~l~~l~~L~~L~L~~n-~~~~~----~~~~l~~l~~L~~L~Ls~n~l~~~~----p~~l~~l~~L~~L~Ls~n~l~~ 152 (1009)
+...+...++|++|+|++| .+... +...+...++|++|+|++|.+.... ...+...++|++|+|++|.|++
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 4455666777888888877 77653 3344555667777777777765432 2233344566666666666654
Q ss_pred C----CCccccCCCCCCeeec--cCCccCCcCC----ccccCccccceeeecccccc
Q 037197 153 F----LPEDLGNATSLESLDF--RGSFFEGSVP----TSFRNLQKLKFLGLSGNNLT 199 (1009)
Q Consensus 153 ~----~p~~l~~l~~L~~L~L--~~n~~~~~~p----~~~~~l~~L~~L~L~~n~l~ 199 (1009)
. +...+...++|++|+| ++|.++.... ..+...++|++|+|++|.+.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3 2344555566666666 5566654322 22333355666666666554
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.34 E-value=3.6e-08 Score=98.71 Aligned_cols=91 Identities=15% Similarity=0.230 Sum_probs=53.4
Q ss_pred ccccCCcCcEEEeecCCCCCCC----CccccccccceeeeecCcccccC----CCcccccccccceecC--Cccccccc-
Q 037197 493 ELQACPSLSVLDLSSNSLSGEI----PASIASCEKLVSLNLRNNRFSGE----IPKAVATMPTLAILDM--SNNSLFGR- 561 (1009)
Q Consensus 493 ~~~~l~~L~~LdLs~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L--s~N~l~~~- 561 (1009)
.+...++|++|||++|+|+..- ...+...+.|++|+|++|.|+.. +...+...++|+.|+| ++|.+...
T Consensus 60 ~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g 139 (185)
T 1io0_A 60 ALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNV 139 (185)
T ss_dssp HHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHH
T ss_pred HHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHH
Confidence 3444556666666666665322 22233345666777777766642 3455555666777777 66777653
Q ss_pred ---cCcCcCCCCCCcEEecCCCccc
Q 037197 562 ---IPENFGASPALEMLNLSYNKLE 583 (1009)
Q Consensus 562 ---~p~~~~~l~~L~~L~ls~N~l~ 583 (1009)
+.+.+...+.|++|+|++|.+.
T Consensus 140 ~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 140 EMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2334444567777777777764
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.30 E-value=3.5e-06 Score=89.96 Aligned_cols=136 Identities=18% Similarity=0.175 Sum_probs=98.6
Q ss_pred eeccCCce-EEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccC-CCceeeEEeEEEcCCeEEEEEeccCCC
Q 037197 705 IIGMGGNG-IVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLR-HRNIVRLLGYLHNETNVMMVYDYMPND 782 (1009)
Q Consensus 705 ~iG~G~~g-~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~lV~E~~~~g 782 (1009)
.+..|..| .||+......+..+++|+-.. .....+.+|+..++.+. +--+.++++++.+.+..++|||+++|.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~ 105 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG-----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK 105 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET-----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC-----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence 34556555 699988877677899998632 23445668999988884 444778999999999999999999998
Q ss_pred ChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 037197 783 SLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDC----------------------------------------- 821 (1009)
Q Consensus 783 sL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~----------------------------------------- 821 (1009)
++.+...... .....++.++++.++.||+..
T Consensus 106 ~~~~~~~~~~--------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (272)
T 4gkh_A 106 TAFQVLEEYP--------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVE 177 (272)
T ss_dssp EHHHHHHHCG--------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHH
T ss_pred cccccccCCH--------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHH
Confidence 8877653221 112235566667777776421
Q ss_pred --------------CCCeEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 822 --------------QPPVIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 822 --------------~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
.+.++|+|+.+.||+++.++.+-|+||+.+..
T Consensus 178 ~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 178 QVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12478999999999999877778999998753
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.15 E-value=1.4e-05 Score=86.86 Aligned_cols=136 Identities=21% Similarity=0.218 Sum_probs=91.7
Q ss_pred CceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCC---ceeeEEeEEE-cCCeEEEEEec
Q 037197 703 SNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHR---NIVRLLGYLH-NETNVMMVYDY 778 (1009)
Q Consensus 703 ~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hp---niv~l~~~~~-~~~~~~lV~E~ 778 (1009)
.+.++.|....||+. +..+++|+-. .......+.+|+++++.+.+. .+.+++.++. ..+..++||||
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~----~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~ 94 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPK----SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRK 94 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEES----SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEEC
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecC----CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEec
Confidence 456788999999998 3457888742 123345667999999999642 3667777774 44567899999
Q ss_pred cCCCChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhc--------------------------------------
Q 037197 779 MPNDSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHD-------------------------------------- 820 (1009)
Q Consensus 779 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~-------------------------------------- 820 (1009)
++|.++.+..... ++..++..++.++++.|+.||+.
T Consensus 95 i~G~~l~~~~~~~------l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 95 VQGQILGEDGMAV------LPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp CCSEECHHHHHTT------SCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred cCCeECchhhhhh------CCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 9998887632111 22333334444444444444432
Q ss_pred -------------------CCCCeEEeccCCCcEEeCC---CCc-EEEccccccee
Q 037197 821 -------------------CQPPVIHRDIKSNNILLDA---NLE-ARIADFGLARM 853 (1009)
Q Consensus 821 -------------------~~~~ivH~dlk~~NIll~~---~~~-~kl~DfGls~~ 853 (1009)
..+.++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2346799999999999987 455 48999998754
No 421
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.10 E-value=1.5e-05 Score=85.58 Aligned_cols=142 Identities=18% Similarity=0.170 Sum_probs=90.8
Q ss_pred cCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCC---ceeeEEeEEEcCCeEEEEEec
Q 037197 702 ESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHR---NIVRLLGYLHNETNVMMVYDY 778 (1009)
Q Consensus 702 ~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hp---niv~l~~~~~~~~~~~lV~E~ 778 (1009)
..+.|+.|.++.||++...+ |+.++||+..... ......+.+|++.++.+.+. .+++++++. ..++||||
T Consensus 19 ~~~~l~gG~~n~vy~v~~~d-G~~~vvK~~~~~~--~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~ 91 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELAD-GTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp EEEEEEEETTEEEEEEEETT-SCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred ceeeeCCcchhheEEEEeCC-CCeEEEEecCCCC--cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEe
Confidence 45679999999999998765 7889999964321 22234567999999999765 577888764 35899999
Q ss_pred cCCCChhh-----------hhcCCcccc-----------------ccccHHHHHH--------------------HHHHH
Q 037197 779 MPNDSLGE-----------ALHGKEAGK-----------------LLVDWVSRYN--------------------IAVGI 810 (1009)
Q Consensus 779 ~~~gsL~~-----------~l~~~~~~~-----------------~~~~~~~~~~--------------------i~~~i 810 (1009)
++++++.. .+|...... ..-+|...+. ....+
T Consensus 92 l~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~ 171 (288)
T 3d1u_A 92 VDERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLV 171 (288)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHH
T ss_pred cccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 99987531 123221110 0012332210 01111
Q ss_pred HHHHHHHH----hcCCCCeEEeccCCCcEEeCCCCcEEEcccccce
Q 037197 811 AQGLNYLH----HDCQPPVIHRDIKSNNILLDANLEARIADFGLAR 852 (1009)
Q Consensus 811 ~~~L~~LH----~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~ 852 (1009)
-+.++.+. ....+.++|+|+.+.||+++.+ .+.|+|| .+.
T Consensus 172 ~~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 172 EKVLDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp HHHHHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 22233332 1235689999999999999884 5889999 653
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.97 E-value=2.7e-05 Score=86.54 Aligned_cols=143 Identities=11% Similarity=0.143 Sum_probs=89.4
Q ss_pred cCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCC--ceeeEEeEEEcC-CeEEEEEec
Q 037197 702 ESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHR--NIVRLLGYLHNE-TNVMMVYDY 778 (1009)
Q Consensus 702 ~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hp--niv~l~~~~~~~-~~~~lV~E~ 778 (1009)
..+.++.|....+|+.... +..+++|..... ..+.+|+.+++.+... .+.++++++... +..|+||||
T Consensus 45 ~i~~l~gG~~n~~y~v~~~--g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~ 115 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDVG--GRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRR 115 (362)
T ss_dssp EEEEEEECSSEEEEEEEET--TEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEEC
T ss_pred eEEECCCCCcceEEEEEEC--CcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEe
Confidence 3456889999999998753 678999987321 2466888888888643 356788877764 668999999
Q ss_pred cCCCChhhh------------------hcCCcccc-------------ccccHHHH---------------------HHH
Q 037197 779 MPNDSLGEA------------------LHGKEAGK-------------LLVDWVSR---------------------YNI 806 (1009)
Q Consensus 779 ~~~gsL~~~------------------l~~~~~~~-------------~~~~~~~~---------------------~~i 806 (1009)
++|.++.+. +|...... ..-+|... ...
T Consensus 116 l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~ 195 (362)
T 3ovc_A 116 AQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASV 195 (362)
T ss_dssp CCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHH
T ss_pred cCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 998766421 11110000 00011111 011
Q ss_pred HHHHHHHHHHHHhc-CCCCeEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 807 AVGIAQGLNYLHHD-CQPPVIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 807 ~~~i~~~L~~LH~~-~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
...+....+++... ..+.++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 196 ~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 196 AQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred hHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 11122222233211 125789999999999998877788999998865
No 423
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.81 E-value=3.2e-06 Score=82.13 Aligned_cols=34 Identities=6% Similarity=0.135 Sum_probs=15.0
Q ss_pred CCeEEecCCCCCCCCCCccccCCCCCCeeeccCC
Q 037197 139 GLTSVNASSNNFSGFLPEDLGNATSLESLDFRGS 172 (1009)
Q Consensus 139 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n 172 (1009)
.|++|||+++.++...-..+.++++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 4555555555544333333334444444444443
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.77 E-value=6.2e-06 Score=80.17 Aligned_cols=82 Identities=13% Similarity=0.153 Sum_probs=39.7
Q ss_pred CccEEEeccCccccccCcccCCCCCCcEEEcccCC-cCCCCCcccccc----ccccccccccc-ccCCCcchhhhcccCC
Q 037197 235 NLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYKNN-FTGKIPPELGSI----TSLAFLDLSDN-QISGEIPVKLAELKNL 308 (1009)
Q Consensus 235 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~~~~l----~~L~~L~Ls~N-~l~~~~~~~l~~l~~L 308 (1009)
+|++||++++.++...-..+.++++|++|+|++|. +++..-..+..+ ++|++|+|++| +|++..-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555554444444555555555555553 443322233332 24555555554 2544333444455555
Q ss_pred CeEecccc
Q 037197 309 QLLNLMCN 316 (1009)
Q Consensus 309 ~~L~L~~N 316 (1009)
++|+++++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555554
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.75 E-value=6.8e-05 Score=84.79 Aligned_cols=78 Identities=15% Similarity=0.053 Sum_probs=49.3
Q ss_pred CceeccCCceEEEEEEECCCCeEEEEEEcccCCC--C---hhhHHHHHHHHHHHhccCC--C-ceeeEEeEEEcCCeEEE
Q 037197 703 SNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDN--D---IESGDDLFREVSLLGRLRH--R-NIVRLLGYLHNETNVMM 774 (1009)
Q Consensus 703 ~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~--~---~~~~~~~~~E~~~l~~l~H--p-niv~l~~~~~~~~~~~l 774 (1009)
.+.+|.|..+.||++....+++.|+||....... . .....+...|.++++.+.. | .+.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 4568999999999997765567899998643211 0 1123455678888887732 3 34566654 3345689
Q ss_pred EEeccCCC
Q 037197 775 VYDYMPND 782 (1009)
Q Consensus 775 V~E~~~~g 782 (1009)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 426
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.69 E-value=0.00023 Score=79.04 Aligned_cols=84 Identities=6% Similarity=-0.013 Sum_probs=55.3
Q ss_pred Ccee-ccCCceEEEEEEEC---C---CCeEEEEEEcccCCC-ChhhHHHHHHHHHHHhccC-C--CceeeEEeEEEcC--
Q 037197 703 SNII-GMGGNGIVYKAEFH---R---PHMVVAVKKLWRSDN-DIESGDDLFREVSLLGRLR-H--RNIVRLLGYLHNE-- 769 (1009)
Q Consensus 703 ~~~i-G~G~~g~Vyk~~~~---~---~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-H--pniv~l~~~~~~~-- 769 (1009)
.+.| +.|....+|+.... + ++..+++|+...... .......+.+|+++++.+. + -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3457 88889999998754 1 156788887643210 0001234557888888774 2 3577888887665
Q ss_pred -CeEEEEEeccCCCChhh
Q 037197 770 -TNVMMVYDYMPNDSLGE 786 (1009)
Q Consensus 770 -~~~~lV~E~~~~gsL~~ 786 (1009)
+..++||||++|..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 35689999999877654
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.58 E-value=0.00028 Score=77.78 Aligned_cols=141 Identities=19% Similarity=0.307 Sum_probs=78.2
Q ss_pred ceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccC--CCceeeEEe------EEEcCCeEEEE
Q 037197 704 NIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLR--HRNIVRLLG------YLHNETNVMMV 775 (1009)
Q Consensus 704 ~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--Hpniv~l~~------~~~~~~~~~lV 775 (1009)
+.|+.|..+.||++...+ + .+++|+.... . .....|+++++.+. .-.+++++. +....+..++|
T Consensus 38 ~~l~gG~~n~~~~v~~~~-~-~~vlk~~~~~---~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l 109 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDS-G-AVCLKRIHRP---E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVV 109 (346)
T ss_dssp EECC----CEEEEEEETT-E-EEEEEEECSC---H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEE
T ss_pred eeccccccCcEEEEEeCC-C-CEEEEecCCC---H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEE
Confidence 346667788999998754 3 5889988542 1 22234455544442 112334443 22346678999
Q ss_pred EeccCCCChh--------------hhhcCCc-----c-c----cccccHHHHH---------------------------
Q 037197 776 YDYMPNDSLG--------------EALHGKE-----A-G----KLLVDWVSRY--------------------------- 804 (1009)
Q Consensus 776 ~E~~~~gsL~--------------~~l~~~~-----~-~----~~~~~~~~~~--------------------------- 804 (1009)
|||++|..+. ..+|... . . .....|...+
T Consensus 110 ~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 189 (346)
T 2q83_A 110 YDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYL 189 (346)
T ss_dssp EECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred EEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHH
Confidence 9999987542 1111110 0 0 0001221110
Q ss_pred ----HHHHHHHHHHHHHHh----------cCCCCeEEeccCCCcEEeCCCCcEEEcccccce
Q 037197 805 ----NIAVGIAQGLNYLHH----------DCQPPVIHRDIKSNNILLDANLEARIADFGLAR 852 (1009)
Q Consensus 805 ----~i~~~i~~~L~~LH~----------~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~ 852 (1009)
.+...+.+++++|+. .....++|+|+.+.||+++.++.+.|+||+.+.
T Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 190 QEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111223445666653 124589999999999999888899999999774
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.46 E-value=0.00075 Score=72.84 Aligned_cols=140 Identities=16% Similarity=0.160 Sum_probs=91.3
Q ss_pred cCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccC---CCceeeEEeEEEcCCeEEEEEec
Q 037197 702 ESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLR---HRNIVRLLGYLHNETNVMMVYDY 778 (1009)
Q Consensus 702 ~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---Hpniv~l~~~~~~~~~~~lV~E~ 778 (1009)
..+.|+.|....+|+.... +..+++|+.... ....+..|++.++.+. ...++++++++...+..++||||
T Consensus 40 ~~~~l~gG~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~ 112 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLINDE--VQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEA 112 (312)
T ss_dssp EEEEECCSSSSEEEEEESS--SCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEEC
T ss_pred eeEEeCCccceeeeEEEEC--CCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEe
Confidence 3456899999999999753 567888987422 2445568988888883 36788999998888889999999
Q ss_pred cCCCChhh-----------hhcCCcc-cc-----------------ccccHHHHH---HHHH----------------HH
Q 037197 779 MPNDSLGE-----------ALHGKEA-GK-----------------LLVDWVSRY---NIAV----------------GI 810 (1009)
Q Consensus 779 ~~~gsL~~-----------~l~~~~~-~~-----------------~~~~~~~~~---~i~~----------------~i 810 (1009)
+++..+.. .+|.... .. ..-+|...+ ++.. .+
T Consensus 113 l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l 192 (312)
T 3jr1_A 113 LNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLI 192 (312)
T ss_dssp CCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHH
T ss_pred ccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHH
Confidence 99886521 1222211 00 012454322 1111 11
Q ss_pred HHH-HHHHHh-cCCCCeEEeccCCCcEEeCCCCcEEEcccc
Q 037197 811 AQG-LNYLHH-DCQPPVIHRDIKSNNILLDANLEARIADFG 849 (1009)
Q Consensus 811 ~~~-L~~LH~-~~~~~ivH~dlk~~NIll~~~~~~kl~DfG 849 (1009)
++. ...|.. ...+.++|+|+.+.||+++.++ +.|+|++
T Consensus 193 ~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 193 VQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 111 223321 2256899999999999999887 8899984
No 429
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.22 E-value=0.0012 Score=75.13 Aligned_cols=78 Identities=13% Similarity=0.142 Sum_probs=47.8
Q ss_pred CCCeEEeccCCCcEEeCCCCcEEEcccccceecccCCCceeeecc--cCcccCCcccCCC---CCCcccchHhHHHHHHH
Q 037197 822 QPPVIHRDIKSNNILLDANLEARIADFGLARMMLHKNETVSMVAG--SYGYIAPEYGYTL---KVDEKSDIYSFGVVLLE 896 (1009)
Q Consensus 822 ~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~~~~sDv~SlGvvl~e 896 (1009)
.+.++|+|+++.||+++.++ ++++||+.+..-. .......... ...|.+|+..... ......++......+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~-p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGP-MGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEEC-HHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCc-hHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 34899999999999998876 9999999886532 1111111111 1245666543211 11223455677888888
Q ss_pred HHhCC
Q 037197 897 LLTGK 901 (1009)
Q Consensus 897 lltg~ 901 (1009)
.++++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77653
No 430
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.11 E-value=0.0014 Score=70.11 Aligned_cols=78 Identities=14% Similarity=0.099 Sum_probs=53.3
Q ss_pred CCcCceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccC-C--CceeeEEeEEEcCCeEEEEE
Q 037197 700 VKESNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLR-H--RNIVRLLGYLHNETNVMMVY 776 (1009)
Q Consensus 700 ~~~~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-H--pniv~l~~~~~~~~~~~lV~ 776 (1009)
....+.+|.|..+.||+....+ |+.|++|+..... ......+..|++.|+.+. . --+++++++. .-++||
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~D-G~~~~vK~~~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~ 89 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELAD-GTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETT-SCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred eEEEEecCCCCCeEEEEEEECC-CCEEEEEEeCCCC--cchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEE
Confidence 3445678999999999999876 7889999864332 122234558998888874 2 2355566542 237899
Q ss_pred eccCCCCh
Q 037197 777 DYMPNDSL 784 (1009)
Q Consensus 777 E~~~~gsL 784 (1009)
||++++..
T Consensus 90 e~l~~~~~ 97 (288)
T 3f7w_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EeecccCC
Confidence 99987643
No 431
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.99 E-value=0.0014 Score=72.67 Aligned_cols=143 Identities=18% Similarity=0.197 Sum_probs=81.7
Q ss_pred ceeccCCceEEEEEEECC-------CCeEEEEEEcccCCCChhhHHHHHHHHHHHhccC-CCceeeEEeEEEcCCeEEEE
Q 037197 704 NIIGMGGNGIVYKAEFHR-------PHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLR-HRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 704 ~~iG~G~~g~Vyk~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~lV 775 (1009)
+.+..|-...+|++.... ++..|++|+... .........+|.++++.+. +.-..++++++.+ .+|
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~---~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v 128 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA---ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRL 128 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC---ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccE
Confidence 456668888899998742 346888988622 1123445558988888873 3334677777654 399
Q ss_pred EeccCCCChhhh-----------------hcCCc--cccccc-cHHHHHHHHHHHH-------------------HHHHH
Q 037197 776 YDYMPNDSLGEA-----------------LHGKE--AGKLLV-DWVSRYNIAVGIA-------------------QGLNY 816 (1009)
Q Consensus 776 ~E~~~~gsL~~~-----------------l~~~~--~~~~~~-~~~~~~~i~~~i~-------------------~~L~~ 816 (1009)
|||++|.++..- +|... .++... -|.+..++..++. +.++.
T Consensus 129 ~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (379)
T 3feg_A 129 EQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGN 208 (379)
T ss_dssp EECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHH
T ss_pred EEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHH
Confidence 999998655311 11111 011111 2333333333321 12222
Q ss_pred H----Hhc-CCCCeEEeccCCCcEEeCCC----CcEEEccccccee
Q 037197 817 L----HHD-CQPPVIHRDIKSNNILLDAN----LEARIADFGLARM 853 (1009)
Q Consensus 817 L----H~~-~~~~ivH~dlk~~NIll~~~----~~~kl~DfGls~~ 853 (1009)
| ... ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 209 L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 209 LRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 221 23478899999999999876 7899999998854
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.96 E-value=7.7e-05 Score=73.90 Aligned_cols=115 Identities=14% Similarity=0.135 Sum_probs=62.8
Q ss_pred cccccCCCCCeEecccC-ccccc----CCccccccCccCcccccccccCCCCCCC----CCCCcCCeEEecCCCCCCCCC
Q 037197 84 ENIRGLRSLSSLNICCN-EFASS----LPKSLANLTALKSMDVSQNNFIGSFPTG----LGKASGLTSVNASSNNFSGFL 154 (1009)
Q Consensus 84 ~~l~~l~~L~~L~L~~n-~~~~~----~~~~l~~l~~L~~L~Ls~n~l~~~~p~~----l~~l~~L~~L~Ls~n~l~~~~ 154 (1009)
..+.+-+.|++|+|++| ++.+. +.+.+..-+.|++|+|++|.+....... +..-+.|++|+|++|.|+...
T Consensus 35 ~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~G 114 (197)
T 1pgv_A 35 RLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPEL 114 (197)
T ss_dssp HHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHH
T ss_pred HHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHH
Confidence 34455667777888774 66542 3455566667777777777765433222 223456677777777666432
Q ss_pred ----CccccCCCCCCeeeccCC---ccCCc----CCccccCccccceeeeccccc
Q 037197 155 ----PEDLGNATSLESLDFRGS---FFEGS----VPTSFRNLQKLKFLGLSGNNL 198 (1009)
Q Consensus 155 ----p~~l~~l~~L~~L~L~~n---~~~~~----~p~~~~~l~~L~~L~L~~n~l 198 (1009)
...+..-+.|++|+|++| .+... +...+..-+.|+.|+++.|.+
T Consensus 115 a~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 115 LARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 233444455666666644 22221 222333335566666655543
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.80 E-value=0.00012 Score=72.50 Aligned_cols=15 Identities=20% Similarity=0.266 Sum_probs=7.9
Q ss_pred ccccCccCccccccc
Q 037197 110 LANLTALKSMDVSQN 124 (1009)
Q Consensus 110 l~~l~~L~~L~Ls~n 124 (1009)
+.+-+.|++|+|++|
T Consensus 37 l~~n~~L~~L~L~~n 51 (197)
T 1pgv_A 37 REDDTDLKEVNINNM 51 (197)
T ss_dssp HTTCSSCCEEECTTC
T ss_pred HhcCCCccEEECCCC
Confidence 344455666666553
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.80 E-value=0.0033 Score=67.71 Aligned_cols=71 Identities=13% Similarity=0.051 Sum_probs=42.6
Q ss_pred CceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCce-eeEEeEEEcCCeEEEEEecc-C
Q 037197 703 SNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNI-VRLLGYLHNETNVMMVYDYM-P 780 (1009)
Q Consensus 703 ~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpni-v~l~~~~~~~~~~~lV~E~~-~ 780 (1009)
.+.|+.|....+|+. ..+++|+..... .......+|+.+++.+....+ .+++++. .+.-++|+||+ +
T Consensus 23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~---~~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~ 91 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA------GDLCLRIPGKGT---EEYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAG 91 (301)
T ss_dssp CEEEESCSSEEEEEE------TTEEEEEECC-------CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTT
T ss_pred eeEcCCcccccccee------eeEEEECCCCCc---cceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCC
Confidence 677888999999999 347888874321 111112357776666632222 4666543 33347899999 6
Q ss_pred CCCh
Q 037197 781 NDSL 784 (1009)
Q Consensus 781 ~gsL 784 (1009)
+.++
T Consensus 92 g~~l 95 (301)
T 3dxq_A 92 AQTM 95 (301)
T ss_dssp CEEC
T ss_pred CccC
Confidence 6544
No 435
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.73 E-value=0.0029 Score=71.85 Aligned_cols=73 Identities=15% Similarity=0.254 Sum_probs=49.1
Q ss_pred ceeccCCceEEEEEEECC-------CCeEEEEEEcccCCCChhhHHHHHHHHHHHhccC-CCceeeEEeEEEcCCeEEEE
Q 037197 704 NIIGMGGNGIVYKAEFHR-------PHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLR-HRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 704 ~~iG~G~~g~Vyk~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~lV 775 (1009)
+.|+.|....||++...+ .+..|++|+.... .. ...+.+|..+++.+. +.-.+++++.+.+ .+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v 150 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRL 150 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--Cc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEE
Confidence 457888889999998753 2467889987321 11 134557888888874 3334677776643 389
Q ss_pred EeccCCCCh
Q 037197 776 YDYMPNDSL 784 (1009)
Q Consensus 776 ~E~~~~gsL 784 (1009)
|||++|.++
T Consensus 151 ~e~l~G~~l 159 (429)
T 1nw1_A 151 EEYIPSRPL 159 (429)
T ss_dssp ECCCCEEEC
T ss_pred EEEeCCccc
Confidence 999987544
No 436
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.73 E-value=0.0044 Score=70.64 Aligned_cols=75 Identities=19% Similarity=0.192 Sum_probs=47.8
Q ss_pred CceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCce-eeEEeEEEcCCeEEEEEeccCC
Q 037197 703 SNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNI-VRLLGYLHNETNVMMVYDYMPN 781 (1009)
Q Consensus 703 ~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpni-v~l~~~~~~~~~~~lV~E~~~~ 781 (1009)
.+.|+.|-...+|++...+.+..+++|+........ -+-.+|..+++.+...++ .++++++.. ..||||++|
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~---idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G 185 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI---INREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDG 185 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC---SCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCS
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh---cCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCC
Confidence 346788888999999886545788899874321111 111378888888854444 577777632 359999988
Q ss_pred CCh
Q 037197 782 DSL 784 (1009)
Q Consensus 782 gsL 784 (1009)
.++
T Consensus 186 ~~l 188 (458)
T 2qg7_A 186 YAL 188 (458)
T ss_dssp EEC
T ss_pred ccC
Confidence 544
No 437
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.65 E-value=0.0053 Score=67.20 Aligned_cols=32 Identities=25% Similarity=0.428 Sum_probs=27.7
Q ss_pred CCCeEEeccCCCcEEeCCC----CcEEEccccccee
Q 037197 822 QPPVIHRDIKSNNILLDAN----LEARIADFGLARM 853 (1009)
Q Consensus 822 ~~~ivH~dlk~~NIll~~~----~~~kl~DfGls~~ 853 (1009)
...++|||+.+.||+++.+ +.+.|+||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 3489999999999999875 6899999998864
No 438
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.47 E-value=0.0024 Score=59.02 Aligned_cols=37 Identities=27% Similarity=0.269 Sum_probs=21.2
Q ss_pred ccceecCCccccccccCcCcCCCCCCcEEecCCCccc
Q 037197 547 TLAILDMSNNSLFGRIPENFGASPALEMLNLSYNKLE 583 (1009)
Q Consensus 547 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 583 (1009)
+|+.|||++|+|+...+..|..+++|+.|+|++|++.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555566666665555555555666666666555443
No 439
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.47 E-value=0.0027 Score=58.59 Aligned_cols=56 Identities=18% Similarity=0.341 Sum_probs=31.7
Q ss_pred EEEeecCCCC-CCCCccccccccceeeeecCcccccCCCcccccccccceecCCccccc
Q 037197 502 VLDLSSNSLS-GEIPASIASCEKLVSLNLRNNRFSGEIPKAVATMPTLAILDMSNNSLF 559 (1009)
Q Consensus 502 ~LdLs~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 559 (1009)
.+|.+++.|+ ..+|..+. .+|+.|+|++|+|+...+..|..+++|+.|+|++|++.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555556554 23443322 24666666666666444555666666666666666653
No 440
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.31 E-value=0.014 Score=63.37 Aligned_cols=144 Identities=16% Similarity=0.157 Sum_probs=78.4
Q ss_pred ceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCc--eeeEEeE------EEcCCeEEEE
Q 037197 704 NIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRN--IVRLLGY------LHNETNVMMV 775 (1009)
Q Consensus 704 ~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpn--iv~l~~~------~~~~~~~~lV 775 (1009)
+.|+.|....+|+....+ + .+++|+.... .....+..|+++++.+.... +.+++.. ....+..++|
T Consensus 28 ~~i~~G~~n~~~~v~~~~-g-~~vlk~~~~~----~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l 101 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTK-D-PLILTLYEKR----VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAAL 101 (322)
T ss_dssp EEECC---EEEEEEEESS-C-CEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEE
T ss_pred eccCCCcccceEEEEeCC-c-cEEEEEeCCC----CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEE
Confidence 456778889999998754 3 5888987542 11223445777666653111 3333321 1234567899
Q ss_pred EeccCCCChhh--------------hhcCC----ccc----cccccHHHHHH------------HHHHHHHHHHHHHhc-
Q 037197 776 YDYMPNDSLGE--------------ALHGK----EAG----KLLVDWVSRYN------------IAVGIAQGLNYLHHD- 820 (1009)
Q Consensus 776 ~E~~~~gsL~~--------------~l~~~----~~~----~~~~~~~~~~~------------i~~~i~~~L~~LH~~- 820 (1009)
|+|++|..+.. .+|.. ... .....|...+. +...+.+.+++++..
T Consensus 102 ~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~ 181 (322)
T 2ppq_A 102 ISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHW 181 (322)
T ss_dssp EECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHC
T ss_pred EEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhC
Confidence 99999865421 01110 000 00112322111 011234445555432
Q ss_pred ---CCCCeEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 821 ---CQPPVIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 821 ---~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
...+++|+|+.+.||++++++.+.|+||+.+..
T Consensus 182 ~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 182 PKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp CCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 234799999999999999876668999997753
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.02 E-value=0.019 Score=63.75 Aligned_cols=74 Identities=11% Similarity=0.132 Sum_probs=42.7
Q ss_pred ceeccCCceEEEEEEECC--------CCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCc-eeeEEeEEEcCCeEEE
Q 037197 704 NIIGMGGNGIVYKAEFHR--------PHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRN-IVRLLGYLHNETNVMM 774 (1009)
Q Consensus 704 ~~iG~G~~g~Vyk~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpn-iv~l~~~~~~~~~~~l 774 (1009)
+.++.|....+|++...+ .+..+++|+.... .....+...|.++++.+...+ +.++++.. . -++
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~---~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~ 111 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKH---VDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGR 111 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTT---GGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCC---ccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcE
Confidence 356778888999998754 1257888886432 111112246777777774223 45666554 2 268
Q ss_pred EEeccCCCCh
Q 037197 775 VYDYMPNDSL 784 (1009)
Q Consensus 775 V~E~~~~gsL 784 (1009)
||||++|.++
T Consensus 112 v~e~i~G~~l 121 (369)
T 3c5i_A 112 IEEWLYGDPL 121 (369)
T ss_dssp EEECCCSEEC
T ss_pred EEEEecCCcC
Confidence 9999988544
No 442
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=95.97 E-value=0.051 Score=59.01 Aligned_cols=143 Identities=13% Similarity=0.120 Sum_probs=78.5
Q ss_pred ceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCC--CceeeEEeE-----EEcCCeEEEEE
Q 037197 704 NIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRH--RNIVRLLGY-----LHNETNVMMVY 776 (1009)
Q Consensus 704 ~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H--pniv~l~~~-----~~~~~~~~lV~ 776 (1009)
..++ |....||++...+ |+.+++|...... .....+..|..+++.+.. -.+++++.. ...++..++||
T Consensus 32 ~~l~-g~~n~~y~v~~~~-g~~~vlK~~~~~~---~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~ 106 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDED-RRRFVVKFYRPER---WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVF 106 (328)
T ss_dssp EEEC-CSSSEEEEECCTT-CCCEEEEEECTTT---SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEE
T ss_pred Eeec-CcccceEEEEcCC-CCEEEEEEcCCCC---CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEE
Confidence 3566 8888999886544 5678999984221 123445567777777632 124444443 22345668899
Q ss_pred eccCCCChhh-----h---------hcC----Ccc-ccccccHHHH----HH---------------HHHHHHHHHHHHH
Q 037197 777 DYMPNDSLGE-----A---------LHG----KEA-GKLLVDWVSR----YN---------------IAVGIAQGLNYLH 818 (1009)
Q Consensus 777 E~~~~gsL~~-----~---------l~~----~~~-~~~~~~~~~~----~~---------------i~~~i~~~L~~LH 818 (1009)
||++|..+.. + +|. ... .....++... .. +...+.+.++.+.
T Consensus 107 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 186 (328)
T 1zyl_A 107 PSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVT 186 (328)
T ss_dssp ECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHH
T ss_pred EecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHH
Confidence 9998854321 0 111 000 0011111110 00 0111112233332
Q ss_pred hc----CCCCeEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 819 HD----CQPPVIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 819 ~~----~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
.. ....++|+|+++.||+++ + .+.|+||+.+..
T Consensus 187 ~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 187 AHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 21 234678999999999999 4 899999987753
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.82 E-value=0.033 Score=60.92 Aligned_cols=31 Identities=23% Similarity=0.333 Sum_probs=27.6
Q ss_pred CCeEEeccCCCcEEeCCCCcEEEccccccee
Q 037197 823 PPVIHRDIKSNNILLDANLEARIADFGLARM 853 (1009)
Q Consensus 823 ~~ivH~dlk~~NIll~~~~~~kl~DfGls~~ 853 (1009)
..++|+|+.+.||+++.++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4789999999999999888899999987754
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.66 E-value=0.023 Score=63.18 Aligned_cols=146 Identities=15% Similarity=0.164 Sum_probs=81.8
Q ss_pred ceeccCCceEEEEEEECC-------CCeEEEEEEcccCCCC---------hhhH-------HHHHHHHHHHhccC-CCce
Q 037197 704 NIIGMGGNGIVYKAEFHR-------PHMVVAVKKLWRSDND---------IESG-------DDLFREVSLLGRLR-HRNI 759 (1009)
Q Consensus 704 ~~iG~G~~g~Vyk~~~~~-------~~~~vavK~~~~~~~~---------~~~~-------~~~~~E~~~l~~l~-Hpni 759 (1009)
+.|..|-...+|++.... ....|.+++.-..... ...+ +....|.++++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 346668888999988753 1367888876332110 0011 12235888888874 4446
Q ss_pred eeEEeEEEcCCeEEEEEeccCCCChhh--h---------------hcCC--ccccccc-cHHHHHHHHHHHH--------
Q 037197 760 VRLLGYLHNETNVMMVYDYMPNDSLGE--A---------------LHGK--EAGKLLV-DWVSRYNIAVGIA-------- 811 (1009)
Q Consensus 760 v~l~~~~~~~~~~~lV~E~~~~gsL~~--~---------------l~~~--~~~~~~~-~~~~~~~i~~~i~-------- 811 (1009)
.++++++.++ +|+||++|.+|.. + +|.. ...+.+. -+....++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 6788777543 8999999765521 1 1111 0111111 1222222322221
Q ss_pred --------------HHH----HHHHhc-CCCCeEEeccCCCcEEeCCC------CcEEEccccccee
Q 037197 812 --------------QGL----NYLHHD-CQPPVIHRDIKSNNILLDAN------LEARIADFGLARM 853 (1009)
Q Consensus 812 --------------~~L----~~LH~~-~~~~ivH~dlk~~NIll~~~------~~~kl~DfGls~~ 853 (1009)
+-+ ++|... ....++|+|+.+.||+++++ +.+.++||..+..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 223221 23467899999999999887 7899999988754
No 445
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=94.46 E-value=0.21 Score=49.58 Aligned_cols=103 Identities=20% Similarity=0.178 Sum_probs=65.9
Q ss_pred CChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCCcEEeCCCCcEEEcccccceecccCCCce
Q 037197 782 DSLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLARMMLHKNETV 861 (1009)
Q Consensus 782 gsL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGls~~~~~~~~~~ 861 (1009)
-||.+.+.... .++++.++|.++.|.+.+|.-+-.... . ..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~~~---~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 33 LSLEEILRLYN---QPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred ccHHHHHHHcC---CCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc---------
Confidence 37889987654 349999999999999999877722101 1 1233456899999999888874 2111
Q ss_pred eeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCC
Q 037197 862 SMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMP 903 (1009)
Q Consensus 862 ~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~P 903 (1009)
.....+.|||... ...+.+.=|||+|+++|.-+-=..|
T Consensus 98 ---~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ---AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ---ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0122466888753 3456788999999999998874444
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.08 E-value=0.18 Score=56.56 Aligned_cols=74 Identities=9% Similarity=0.049 Sum_probs=46.2
Q ss_pred ceeccCCceEEEEEEECCC-------CeEEEEEEcccCCCChhhHHHHHHHHHHHhccC-CCceeeEEeEEEcCCeEEEE
Q 037197 704 NIIGMGGNGIVYKAEFHRP-------HMVVAVKKLWRSDNDIESGDDLFREVSLLGRLR-HRNIVRLLGYLHNETNVMMV 775 (1009)
Q Consensus 704 ~~iG~G~~g~Vyk~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-Hpniv~l~~~~~~~~~~~lV 775 (1009)
+.+..|-...+|+...... +..|++|+..... ...-+-.+|.++++.+. +.-..++++.+. + +.|
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t---~~~idR~~E~~~l~~L~~~gi~P~l~~~~~--~--~~I 148 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV---GKFYDSKVELDVFRYLSNINIAPNIIADFP--E--GRI 148 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC----CCCCHHHHHHHHHHHHHTTSSCCEEEEET--T--EEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc---chhcCHHHHHHHHHHHHhcCCCCCEEEEcC--C--CEE
Confidence 4566788889999987631 4678888863321 11112236777777763 333456665442 2 789
Q ss_pred EeccCCCCh
Q 037197 776 YDYMPNDSL 784 (1009)
Q Consensus 776 ~E~~~~gsL 784 (1009)
|||++|.++
T Consensus 149 ~efI~G~~l 157 (424)
T 3mes_A 149 EEFIDGEPL 157 (424)
T ss_dssp EECCCSEEC
T ss_pred EEEeCCccC
Confidence 999998754
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.95 E-value=1.1 Score=49.88 Aligned_cols=30 Identities=27% Similarity=0.408 Sum_probs=25.2
Q ss_pred CeEEeccCCCcEEe------CCCCcEEEccccccee
Q 037197 824 PVIHRDIKSNNILL------DANLEARIADFGLARM 853 (1009)
Q Consensus 824 ~ivH~dlk~~NIll------~~~~~~kl~DfGls~~ 853 (1009)
.++|+|+.+.||++ +++..+.++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35699999999999 4567799999998864
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=87.47 E-value=1.8 Score=42.96 Aligned_cols=115 Identities=10% Similarity=0.121 Sum_probs=80.2
Q ss_pred CCCceeeEEeEEEcCCeEEEEEeccCCC-ChhhhhcCCccccccccHHHHHHHHHHHHHHHHHHHhcCCCCeEEeccCCC
Q 037197 755 RHRNIVRLLGYLHNETNVMMVYDYMPND-SLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLNYLHHDCQPPVIHRDIKSN 833 (1009)
Q Consensus 755 ~Hpniv~l~~~~~~~~~~~lV~E~~~~g-sL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~dlk~~ 833 (1009)
.||++++. .+-.+++.+.+.|+.-+.+ ++.. ++. .+...+++++.+|+....++++. +|--+.|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik~-------~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IKS-------FTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GGG-------SCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HHh-------cCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecc
Confidence 68988877 5666667666666654322 3333 322 57788999999999988777744 78899999
Q ss_pred cEEeCCCCcEEEcccccceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCC
Q 037197 834 NILLDANLEARIADFGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLD 905 (1009)
Q Consensus 834 NIll~~~~~~kl~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~ 905 (1009)
|++++.++.+++.=.|+...+ +|. ..++..=.-.+=+++..+++++..|+
T Consensus 109 NL~f~~~~~p~i~~RGik~~l-----------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVV-----------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp GEEECTTSCEEESCCEETTTB-----------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred eEEEcCCCCEEEEEccCccCC-----------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999877754322 222 11222223347788899999998886
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=83.49 E-value=0.13 Score=58.66 Aligned_cols=62 Identities=11% Similarity=0.076 Sum_probs=17.1
Q ss_pred CceeccCCceEEEEEEECCCCeEEEE------EEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeEEE
Q 037197 703 SNIIGMGGNGIVYKAEFHRPHMVVAV------KKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGYLH 767 (1009)
Q Consensus 703 ~~~iG~G~~g~Vyk~~~~~~~~~vav------K~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~~~ 767 (1009)
.+.+| ||.||+|.+.....+||| |..+......+....+.+|..+++..+|||+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 34565 999999999875578888 766443333344456778999999999999999988754
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=78.40 E-value=6.2 Score=39.20 Aligned_cols=114 Identities=16% Similarity=0.200 Sum_probs=78.0
Q ss_pred CCCceeeEEeEEEcCCeEEEEEeccCCC-ChhhhhcCCccccccccHHHHHHHHHHHHHHHH-HHHhcCCCCeEEeccCC
Q 037197 755 RHRNIVRLLGYLHNETNVMMVYDYMPND-SLGEALHGKEAGKLLVDWVSRYNIAVGIAQGLN-YLHHDCQPPVIHRDIKS 832 (1009)
Q Consensus 755 ~Hpniv~l~~~~~~~~~~~lV~E~~~~g-sL~~~l~~~~~~~~~~~~~~~~~i~~~i~~~L~-~LH~~~~~~ivH~dlk~ 832 (1009)
.||++ -..+-.+++.+.+.|+.-+++ ++. .++. .+...+++++.+|+.... +++. -+|--+.|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~i~~-------~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-AIRK-------TTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHH-HHHT-------SCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-HHHh-------cCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeC
Confidence 68888 444446777777777765343 333 3322 577889999999988887 6664 47889999
Q ss_pred CcEEeCCCCcEEEcccccceecccCCCceeeecccCcccCCcccCCCCCCcccchHhHHHHHHHHHhCCCCCC
Q 037197 833 NNILLDANLEARIADFGLARMMLHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKMPLD 905 (1009)
Q Consensus 833 ~NIll~~~~~~kl~DfGls~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~SlGvvl~elltg~~Pf~ 905 (1009)
+|++++.++.+++.=.|+-. -++|.- .++.-=.-.+=+++..++.++..|+
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~-----------------~lpP~e-----~~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKE-----------------SLPPDE-----WDDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GGEEECTTCCEEESCCEETT-----------------TBSSCS-----CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred ceEEEeCCCcEEEEEcCCcc-----------------cCCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999998777542 233332 1111123346778888888888775
No 451
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=73.88 E-value=1.4 Score=31.27 Aligned_cols=9 Identities=33% Similarity=0.453 Sum_probs=3.5
Q ss_pred eeehhhhhh
Q 037197 634 IFGFIIGTL 642 (1009)
Q Consensus 634 ~~~~i~g~~ 642 (1009)
+.+.++|++
T Consensus 13 IA~gVVgGv 21 (44)
T 2ks1_B 13 IATGMVGAL 21 (44)
T ss_dssp STHHHHHHH
T ss_pred EEeehhHHH
Confidence 333344433
No 452
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=72.38 E-value=1.1 Score=31.68 Aligned_cols=10 Identities=40% Similarity=0.458 Sum_probs=3.8
Q ss_pred eeehhhhhhH
Q 037197 634 IFGFIIGTLV 643 (1009)
Q Consensus 634 ~~~~i~g~~~ 643 (1009)
+.+.++|+++
T Consensus 12 IA~gVVgGv~ 21 (44)
T 2l2t_A 12 IAAGVIGGLF 21 (44)
T ss_dssp HHHHHHHHHH
T ss_pred EEEeehHHHH
Confidence 3333444333
No 453
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=67.95 E-value=1.8 Score=29.59 Aligned_cols=17 Identities=29% Similarity=0.350 Sum_probs=8.7
Q ss_pred cceeeehhhhhhHHHHH
Q 037197 631 NHIIFGFIIGTLVIVSL 647 (1009)
Q Consensus 631 ~~~~~~~i~g~~~~~~~ 647 (1009)
...+.++++|.++.+.+
T Consensus 10 ~GaIAGiVvG~v~gv~l 26 (38)
T 2k1k_A 10 GGEIVAVIFGLLLGAAL 26 (38)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred CCceeeeehHHHHHHHH
Confidence 34455566665554433
No 454
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=44.84 E-value=7.6 Score=27.37 Aligned_cols=9 Identities=33% Similarity=0.715 Sum_probs=4.4
Q ss_pred eeehhhhhh
Q 037197 634 IFGFIIGTL 642 (1009)
Q Consensus 634 ~~~~i~g~~ 642 (1009)
+.+.++|.+
T Consensus 14 Ia~~vVGvl 22 (44)
T 2jwa_A 14 IISAVVGIL 22 (44)
T ss_dssp HHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 444555533
No 455
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=40.48 E-value=9.9 Score=28.05 Aligned_cols=25 Identities=16% Similarity=0.224 Sum_probs=9.3
Q ss_pred ehhhhhhHHHHHHhhhhccccceec
Q 037197 636 GFIIGTLVIVSLGIVFFAGKWAYRR 660 (1009)
Q Consensus 636 ~~i~g~~~~~~~~~~~~~~~~~~~~ 660 (1009)
++++|..++.+++++++.+-+.+|+
T Consensus 15 svl~GLLLL~Lii~~LwK~GFFKR~ 39 (54)
T 2l8s_A 15 SAFAGLLLLMLLILALWKIGFFKRP 39 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHcCcccCC
Confidence 3334433333333333333334443
No 456
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=42.55 E-value=7.5 Score=26.30 Aligned_cols=22 Identities=14% Similarity=0.463 Sum_probs=11.0
Q ss_pred hhHHHHHHhhhhccccceeccc
Q 037197 641 TLVIVSLGIVFFAGKWAYRRWY 662 (1009)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~ 662 (1009)
..+++++.+++.+..|+++.|+
T Consensus 17 l~vi~iisLIiLi~~w~qKPrY 38 (39)
T 2l6w_A 17 LVVLTIISLIILIMLWQKKPRY 38 (39)
Confidence 3334444444445567666543
No 457
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=32.84 E-value=2.2e+02 Score=33.39 Aligned_cols=84 Identities=18% Similarity=0.131 Sum_probs=48.4
Q ss_pred eEEeEEEcCCeEEEEEeccCCCChhhhhcCCc----------ccc---ccccHHHHHHHHHHHH--HHHHHHHhcCCCCe
Q 037197 761 RLLGYLHNETNVMMVYDYMPNDSLGEALHGKE----------AGK---LLVDWVSRYNIAVGIA--QGLNYLHHDCQPPV 825 (1009)
Q Consensus 761 ~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~----------~~~---~~~~~~~~~~i~~~i~--~~L~~LH~~~~~~i 825 (1009)
+.|.+..-+....+| |+++..++.+.+.... ... .......+..++..+| ..+.|+=.
T Consensus 477 ~~Y~Vipls~~~GLI-E~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YILG------ 549 (696)
T 2x6h_A 477 TPYKVLATSSKHGFL-QYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLLG------ 549 (696)
T ss_dssp CCCCEEESSTTCEEE-ECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHHT------
T ss_pred eccEEEeccCCCCee-eeCCCccHHHHHHhcChHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHcc------
Confidence 445555545444443 6666666665554321 111 0011233444554443 33455542
Q ss_pred EEeccCCCcEEeCCCCcEEEcccccce
Q 037197 826 IHRDIKSNNILLDANLEARIADFGLAR 852 (1009)
Q Consensus 826 vH~dlk~~NIll~~~~~~kl~DfGls~ 852 (1009)
-+|=.++||+++.+|++.=+|||.+-
T Consensus 550 -lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 550 -VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp -CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred -CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 27888999999999999999999873
No 458
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=30.55 E-value=21 Score=24.91 Aligned_cols=8 Identities=25% Similarity=0.509 Sum_probs=2.9
Q ss_pred hhhhhHHH
Q 037197 638 IIGTLVIV 645 (1009)
Q Consensus 638 i~g~~~~~ 645 (1009)
++|...+.
T Consensus 18 l~GLllL~ 25 (42)
T 2k1a_A 18 LGGLLLLT 25 (42)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 459
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=29.91 E-value=16 Score=27.92 Aligned_cols=9 Identities=22% Similarity=0.062 Sum_probs=3.4
Q ss_pred hccccceec
Q 037197 652 FAGKWAYRR 660 (1009)
Q Consensus 652 ~~~~~~~~~ 660 (1009)
...+|.+|+
T Consensus 31 cvkcrhRrr 39 (70)
T 2klu_A 31 SVRSRHRRR 39 (70)
T ss_dssp HHHSSCCSS
T ss_pred hhHHHHHHH
Confidence 333344333
No 460
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=28.61 E-value=89 Score=26.44 Aligned_cols=45 Identities=13% Similarity=0.068 Sum_probs=24.4
Q ss_pred ccccCCccccCCCCccEEEeccCccccccCcccCCCCCCcEEEccc
Q 037197 222 FEGEIPAEFGNLTNLRYLDLAVGSLSGQIPPALGRLKKLTTVYLYK 267 (1009)
Q Consensus 222 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~ 267 (1009)
++.+....|.++++|+.+.|-.+ ++.+...+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33344455666666666666543 3334445566666666666654
No 461
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=26.62 E-value=4.3e+02 Score=30.45 Aligned_cols=84 Identities=17% Similarity=0.133 Sum_probs=50.6
Q ss_pred eeEEeEEEcCCeEEEEEeccCCCChhhhhc----------CCcccc---ccccHHHHHHHHHHHH--HHHHHHHhcCCCC
Q 037197 760 VRLLGYLHNETNVMMVYDYMPNDSLGEALH----------GKEAGK---LLVDWVSRYNIAVGIA--QGLNYLHHDCQPP 824 (1009)
Q Consensus 760 v~l~~~~~~~~~~~lV~E~~~~gsL~~~l~----------~~~~~~---~~~~~~~~~~i~~~i~--~~L~~LH~~~~~~ 824 (1009)
++.|.+...+....+ .|++++.++.+.+. ...... ....+..+..++..+| ..+.|+=.
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILG----- 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILG----- 475 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeee-----
Confidence 455666666655555 47777655555443 211111 1122444555555443 24556643
Q ss_pred eEEeccCCCcEEeCCCCcEEEcccccc
Q 037197 825 VIHRDIKSNNILLDANLEARIADFGLA 851 (1009)
Q Consensus 825 ivH~dlk~~NIll~~~~~~kl~DfGls 851 (1009)
| +|=.++||+++.+|++.=+|||.+
T Consensus 476 i--gDRH~~NILld~tG~v~HIDFG~~ 500 (614)
T 3ls8_A 476 V--GDRHLDNLLLTKTGKLFHIDFGYI 500 (614)
T ss_dssp C--CCCCTTSEEECTTSCEEECCCSSC
T ss_pred c--cCCCCcceeEcCCCCEeeeehHHh
Confidence 2 677789999999999999999987
No 462
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=25.14 E-value=1.5e+02 Score=24.89 Aligned_cols=38 Identities=11% Similarity=-0.007 Sum_probs=15.0
Q ss_pred CcCCCCCCcccEEEccCCccCccCCccccCCCCCceeec
Q 037197 323 PDKLGELTKLEVLELWKNSLIGSLPMRLGQSSPLRRLDA 361 (1009)
Q Consensus 323 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L 361 (1009)
..+|.++.+|+.+.+-.+ ++.+....|.++.+|+.+.+
T Consensus 13 ~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLIL 50 (100)
T ss_dssp SCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEE
T ss_pred HHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEE
Confidence 344444444444444322 23333333444444444443
No 463
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=23.62 E-value=25 Score=27.03 Aligned_cols=29 Identities=28% Similarity=0.471 Sum_probs=12.5
Q ss_pred ceeee-hhhhhhHHHHHHhhhhccccceec
Q 037197 632 HIIFG-FIIGTLVIVSLGIVFFAGKWAYRR 660 (1009)
Q Consensus 632 ~~~~~-~i~g~~~~~~~~~~~~~~~~~~~~ 660 (1009)
.+..+ ++++++.+++.+++++..+++++.
T Consensus 16 tLRigGLifA~vLfi~GI~iilS~kcrCk~ 45 (67)
T 2jp3_A 16 SLQLGGLIFGGLLCIAGIALALSGKCKCRR 45 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred HheecchhhHHHHHHHHHHHHHcCcccccC
Confidence 34433 444444444333444444444443
No 464
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=21.99 E-value=2.3e+02 Score=29.85 Aligned_cols=137 Identities=9% Similarity=0.124 Sum_probs=71.2
Q ss_pred CceeccCCceEEEEEEECCCCeEEEEEEcccCCCChhhHHHHHHHHHHHhccCCCceeeEEeE-------------EE--
Q 037197 703 SNIIGMGGNGIVYKAEFHRPHMVVAVKKLWRSDNDIESGDDLFREVSLLGRLRHRNIVRLLGY-------------LH-- 767 (1009)
Q Consensus 703 ~~~iG~G~~g~Vyk~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~l~~~-------------~~-- 767 (1009)
++..-.|..|.++... ++..|+||-. + ....+-+..++...-.+.-|+..-+.-. +.
T Consensus 74 I~~s~~Gstgvff~~t---d~~~~VVK~s--~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~ 145 (342)
T 1cja_A 74 IERSEKGTEGLFFVET---ESGVFIVKRS--T---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKS 145 (342)
T ss_dssp EEECCSTTSCEEEEEE---SSCEEEEECC--T---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSS
T ss_pred EEeccCCCCCeEEEEe---CCCEEEEeCc--H---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhh
Confidence 3444556555554444 2568888844 1 2222333355555555666664333211 00
Q ss_pred -------cCCeEEEEEeccCCCChhhhhcCCccccccccHHHHHHHHHHH--HHHHHHHHhcCC-CCeEE-eccCCCcEE
Q 037197 768 -------NETNVMMVYDYMPNDSLGEALHGKEAGKLLVDWVSRYNIAVGI--AQGLNYLHHDCQ-PPVIH-RDIKSNNIL 836 (1009)
Q Consensus 768 -------~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~~i--~~~L~~LH~~~~-~~ivH-~dlk~~NIl 836 (1009)
......++|||++|..|.+.-+..... .+.... +.++ +-+++.+..+.. .+.+. .--.+.||+
T Consensus 146 ~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~--~f~~~~----~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL 219 (342)
T 1cja_A 146 FRVITTLANQANILLMELVRGITLNKLTTTSAPE--VLTKST----MQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIM 219 (342)
T ss_dssp SCHHHHHTTCSEEEEEECCCEEESTTCCSSSHHH--HSCHHH----HHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEE
T ss_pred hHHHHHhhcccceehhhhcCCCccccchhhhhhh--hcCHHH----HHhhchhheehhhhcCCccCcccccCCCChhheE
Confidence 122467999999977766543321111 022222 2222 334556655532 12211 124789999
Q ss_pred eCCCCc-EEEccccccee
Q 037197 837 LDANLE-ARIADFGLARM 853 (1009)
Q Consensus 837 l~~~~~-~kl~DfGls~~ 853 (1009)
++.++. +.++|-+.+..
T Consensus 220 ~~~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 220 LSERGATVVPIDSKIIPL 237 (342)
T ss_dssp EESBTTCEEECSCCCCCC
T ss_pred EeCCCCeEEEEcCCcccc
Confidence 987554 88999998854
Done!