BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037200
(151 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 117 bits (292), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +GDG +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 69
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 127
Query: 125 VDVDGDGMVNYNEFKQMMKG 144
D+DGDG VNY EF QMM
Sbjct: 128 ADIDGDGQVNYEEFVQMMTA 147
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 115 bits (289), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +GDG +D EF
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 370
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 371 TMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 428
Query: 125 VDVDGDGMVNYNEFKQMM 142
D+DGDG VNY EF QMM
Sbjct: 429 ADIDGDGQVNYEEFVQMM 446
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 115 bits (289), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +GDG +D EF
Sbjct: 310 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 369
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 370 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 427
Query: 125 VDVDGDGMVNYNEFKQMM 142
D+DGDG VNY EF QMM
Sbjct: 428 ADIDGDGQVNYEEFVQMM 445
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 115 bits (289), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +GDG +D EF
Sbjct: 310 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 369
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 370 TMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 427
Query: 125 VDVDGDGMVNYNEFKQMM 142
D+DGDG VNY EF QMM
Sbjct: 428 ADIDGDGQVNYEEFVQMM 445
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 115 bits (289), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +GDG +D EF
Sbjct: 310 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 369
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 370 TMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 427
Query: 125 VDVDGDGMVNYNEFKQMM 142
D+DGDG VNY EF QMM
Sbjct: 428 ADIDGDGQVNYEEFVQMM 445
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 115 bits (287), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDQMIRE 128
Query: 125 VDVDGDGMVNYNEFKQMMKG 144
D+DGDG VNY EF QMM
Sbjct: 129 ADIDGDGQVNYEEFVQMMTA 148
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 115 bits (287), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 128
Query: 125 VDVDGDGMVNYNEFKQMMKG 144
D+DGDG VNY EF QMM
Sbjct: 129 ADIDGDGQVNYEEFVQMMTA 148
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 115 bits (287), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 128
Query: 125 VDVDGDGMVNYNEFKQMMKG 144
D+DGDG VNY EF QMM
Sbjct: 129 ADIDGDGQVNYEEFVQMMTA 148
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 115 bits (287), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 68 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 125
Query: 125 VDVDGDGMVNYNEFKQMMKG 144
D+DGDG VNY EF QMM
Sbjct: 126 ADIDGDGQVNYEEFVQMMTA 145
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 114 bits (286), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 16 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 75
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 76 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 133
Query: 125 VDVDGDGMVNYNEFKQMMKG 144
D+DGDG VNY EF QMM
Sbjct: 134 ADIDGDGQVNYEEFVQMMTA 153
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 114 bits (286), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 12 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 71
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 72 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 129
Query: 125 VDVDGDGMVNYNEFKQMMKG 144
D+DGDG VNY EF QMM
Sbjct: 130 ADIDGDGQVNYEEFVQMMTA 149
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 114 bits (286), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 127
Query: 125 VDVDGDGMVNYNEFKQMMKG 144
D+DGDG VNY EF QMM
Sbjct: 128 ADIDGDGQVNYEEFVQMMTA 147
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 114 bits (286), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 14 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 73
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 74 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 131
Query: 125 VDVDGDGMVNYNEFKQMMKG 144
D+DGDG VNY EF QMM
Sbjct: 132 ADIDGDGQVNYEEFVQMMTA 151
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 371 TMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 428
Query: 125 VDVDGDGMVNYNEFKQMM 142
D+DGDG VNY EF QMM
Sbjct: 429 ADIDGDGQVNYEEFVQMM 446
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 68 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 125
Query: 125 VDVDGDGMVNYNEFKQMMKG 144
D+DGDG VNY EF QMM
Sbjct: 126 ADIDGDGQVNYEEFVQMMTA 145
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 7 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 66
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 67 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 124
Query: 125 VDVDGDGMVNYNEFKQMMKG 144
D+DGDG VNY EF QMM
Sbjct: 125 ADIDGDGQVNYEEFVQMMTA 144
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 128
Query: 125 VDVDGDGMVNYNEFKQMMKG 144
D+DGDG VNY EF QMM
Sbjct: 129 ADIDGDGQVNYEEFVQMMTA 148
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 127
Query: 125 VDVDGDGMVNYNEFKQMMKG 144
D+DGDG VNY EF QMM
Sbjct: 128 ADIDGDGQVNYEEFVQMMTA 147
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 6 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 65
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 66 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 123
Query: 125 VDVDGDGMVNYNEFKQMMKG 144
D+DGDG VNY EF QMM
Sbjct: 124 ADIDGDGQVNYEEFVQMMTA 143
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 114 bits (285), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 68 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 125
Query: 125 VDVDGDGMVNYNEFKQMM 142
D+DGDG VNY EF QMM
Sbjct: 126 ADIDGDGQVNYEEFVQMM 143
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 114 bits (285), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 128
Query: 125 VDVDGDGMVNYNEFKQMMKG 144
D+DGDG VNY EF QMM
Sbjct: 129 ADIDGDGQVNYEEFVQMMTA 148
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 114 bits (285), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 9 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 68
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 69 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 126
Query: 125 VDVDGDGMVNYNEFKQMM 142
D+DGDG VNY EF QMM
Sbjct: 127 ADIDGDGQVNYEEFVQMM 144
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 114 bits (285), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 371 TMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 428
Query: 125 VDVDGDGMVNYNEFKQMM 142
D+DGDG VNY EF QMM
Sbjct: 429 ADIDGDGQVNYEEFVQMM 446
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 114 bits (285), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 371 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 428
Query: 125 VDVDGDGMVNYNEFKQMM 142
D+DGDG VNY EF QMM
Sbjct: 429 ADIDGDGQVNYEEFVQMM 446
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 114 bits (284), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 85/138 (61%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +GDG +D EF
Sbjct: 302 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 361
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
+ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 362 IMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 419
Query: 125 VDVDGDGMVNYNEFKQMM 142
D+DGDG VNY EF QMM
Sbjct: 420 ADIDGDGQVNYEEFVQMM 437
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 114 bits (284), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 312 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 371
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 372 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 429
Query: 125 VDVDGDGMVNYNEFKQMM 142
D+DGDG VNY EF QMM
Sbjct: 430 ADIDGDGQVNYEEFVQMM 447
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 114 bits (284), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 371 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 428
Query: 125 VDVDGDGMVNYNEFKQMM 142
D+DGDG VNY EF QMM
Sbjct: 429 ADIDGDGQVNYEEFVQMM 446
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 114 bits (284), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 277 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 336
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 337 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 394
Query: 125 VDVDGDGMVNYNEFKQMM 142
D+DGDG VNY EF QMM
Sbjct: 395 ADIDGDGQVNYEEFVQMM 412
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 114 bits (284), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 277 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 336
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 337 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 394
Query: 125 VDVDGDGMVNYNEFKQMM 142
D+DGDG VNY EF QMM
Sbjct: 395 ADIDGDGQVNYEEFVQMM 412
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 114 bits (284), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 274 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 333
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 334 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 391
Query: 125 VDVDGDGMVNYNEFKQMM 142
D+DGDG VNY EF QMM
Sbjct: 392 ADIDGDGQVNYEEFVQMM 409
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 114 bits (284), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG + T E+ MI++
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG--EXLTDEEVDEMIRE 128
Query: 125 VDVDGDGMVNYNEFKQMMKG 144
D+DGDG VNY EF QMM
Sbjct: 129 ADIDGDGQVNYEEFVQMMTA 148
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 114 bits (284), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG + T E+ MI++
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG--EXLTDEEVDEMIRE 127
Query: 125 VDVDGDGMVNYNEFKQMMKG 144
D+DGDG VNY EF QMM
Sbjct: 128 ADIDGDGQVNYEEFVQMMTA 147
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 113 bits (283), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
+L M +KEAF VFD++G+G+I+ ELR V+ +LG K T E+ MI++
Sbjct: 70 NLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEK--LTDEEVDEMIRE 127
Query: 125 VDVDGDGMVNYNEFKQMM 142
DVDGDG VNY EF Q+M
Sbjct: 128 ADVDGDGQVNYEEFVQVM 145
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 113 bits (283), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
+L M +KEAF VFD++G+G+I+ ELR V+ +LG K T E+ MI++
Sbjct: 70 NLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEK--LTDEEVDEMIRE 127
Query: 125 VDVDGDGMVNYNEFKQMM 142
DVDGDG VNY EF Q+M
Sbjct: 128 ADVDGDGQVNYEEFVQVM 145
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 113 bits (282), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 7 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 66
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
+L M +KEAF VFD++G+G+I+ ELR V+ +LG K T E+ MI++
Sbjct: 67 NLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEK--LTDEEVDEMIRE 124
Query: 125 VDVDGDGMVNYNEFKQMM 142
DVDGDG VNY EF Q+M
Sbjct: 125 ADVDGDGQVNYEEFVQVM 142
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 112 bits (281), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 127
Query: 125 VDVDGDGMVNYNEFKQMMKG 144
++DGDG VNY EF QMM
Sbjct: 128 ANIDGDGQVNYEEFVQMMTA 147
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 111 bits (277), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
+ M ++EAF VFD++G+G+I+ ELR V+ +LG K T E+ MI++
Sbjct: 71 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK--LTDEEVDEMIREA 128
Query: 126 DVDGDGMVNYNEFKQMMKG 144
D+DGDG VNY EF MM
Sbjct: 129 DIDGDGQVNYEEFVTMMTA 147
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 110 bits (276), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 85/137 (62%), Gaps = 2/137 (1%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
+ M ++EAF VFD++G+G+I+ ELR V+ +LG K T E+ MI++
Sbjct: 71 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK--LTDEEVDEMIREA 128
Query: 126 DVDGDGMVNYNEFKQMM 142
D+DGDG VNY EF MM
Sbjct: 129 DIDGDGQVNYEEFVTMM 145
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 110 bits (276), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 85/137 (62%), Gaps = 2/137 (1%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
+ M ++EAF VFD++G+G+I+ ELR V+ +LG K T E+ MI++
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK--LTDEEVDEMIREA 129
Query: 126 DVDGDGMVNYNEFKQMM 142
D+DGDG VNY EF MM
Sbjct: 130 DIDGDGQVNYEEFVTMM 146
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E+R F++FD++G+G I+ EL + NLG + D E+ +MI + D++GDG V+ EF +
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 144
Query: 66 LYQT 69
+ T
Sbjct: 145 MMTT 148
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 110 bits (276), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 85/137 (62%), Gaps = 2/137 (1%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
+ M ++EAF VFD++G+G+I+ ELR V+ +LG K T E+ MI++
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK--LTDEEVDEMIREA 129
Query: 126 DVDGDGMVNYNEFKQMM 142
D+DGDG VNY EF MM
Sbjct: 130 DIDGDGQVNYEEFVTMM 146
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 110 bits (274), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 85/137 (62%), Gaps = 2/137 (1%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
+ M ++EAF VFD++G+G+I+ ELR V+ +LG K T E+ MI++
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK--LTDEEVDEMIRES 129
Query: 126 DVDGDGMVNYNEFKQMM 142
D+DGDG VNY EF MM
Sbjct: 130 DIDGDGQVNYEEFVTMM 146
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 108 bits (270), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 86/140 (61%), Gaps = 3/140 (2%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 6 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 65
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++
Sbjct: 66 TMMARKM-KDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 122
Query: 125 VDVDGDGMVNYNEFKQMMKG 144
++DGDG VNY EF QMM
Sbjct: 123 ANIDGDGQVNYEEFVQMMTA 142
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 108 bits (270), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 87/138 (63%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
+E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
+L M +KEAF VFD++ +G+I+ ELR V+ +LG K T E+ MI++
Sbjct: 71 NLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK--LTDEEVDEMIRE 128
Query: 125 VDVDGDGMVNYNEFKQMM 142
DVDGDG +NY+EF ++M
Sbjct: 129 ADVDGDGQINYDEFVKVM 146
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 107 bits (268), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
+E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
+L M +KEAF VFD++ +G+I+ ELR V+ +LG K T E+ MI++
Sbjct: 71 NLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK--LTDEEVDEMIRE 128
Query: 125 VDVDGDGMVNYNEFKQMM 142
DVDGDG +NY EF ++M
Sbjct: 129 ADVDGDGQINYEEFVKVM 146
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 107 bits (268), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 84/138 (60%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 10 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
SL M + EAF VFD++G+G I+ ELR V+ +LG K T ++ MI++
Sbjct: 70 SLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEK--LTDDEVDEMIRE 127
Query: 125 VDVDGDGMVNYNEFKQMM 142
D+DGDG +NY EF +MM
Sbjct: 128 ADIDGDGHINYEEFVRMM 145
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 39/103 (37%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVD------------ 128
KEAF +FD++GDG IT +EL +V+ SLG Q T + + MI +VD D
Sbjct: 13 KEAFALFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNGTIDFPEFLS 70
Query: 129 -------------------------GDGMVNYNEFKQMMKGGG 146
G+G+++ E + +M G
Sbjct: 71 LMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG 113
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 107 bits (268), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 84/138 (60%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 10 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
SL M + EAF VFD++G+G I+ ELR V+ +LG K T ++ MI++
Sbjct: 70 SLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEK--LTDDEVDEMIRE 127
Query: 125 VDVDGDGMVNYNEFKQMM 142
D+DGDG +NY EF +MM
Sbjct: 128 ADIDGDGHINYEEFVRMM 145
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 39/103 (37%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVD------------ 128
KEAF +FD++GDG IT +EL +V+ SLG Q T + + MI +VD D
Sbjct: 13 KEAFALFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNGTIDFPEFLS 70
Query: 129 -------------------------GDGMVNYNEFKQMMKGGG 146
G+G+++ E + +M G
Sbjct: 71 LMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG 113
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 106 bits (264), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 85/138 (61%), Gaps = 4/138 (2%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VFD++G+G+I+ ELR V+ +LG K T E+ MI++
Sbjct: 70 TMMARKM--KDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK--LTDEEVDEMIRE 125
Query: 125 VDVDGDGMVNYNEFKQMM 142
D+DGDG VNY EF MM
Sbjct: 126 ADIDGDGQVNYEEFVTMM 143
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 87/137 (63%), Gaps = 2/137 (1%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
+ + F +FD++GDG IT +EL+ +++L + EL MI ++D +G+G ++ +EF S
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
L + +KEAF VFD++ +GYI+ ELR V+ +LG K T E+ + MIK+
Sbjct: 71 LMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEK--LTDEEVEQMIKEA 128
Query: 126 DVDGDGMVNYNEFKQMM 142
D+DGDG VNY EF +MM
Sbjct: 129 DLDGDGQVNYEEFVKMM 145
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
EL+ F++FD++ +G I+ EL + NLG + D E+ QMI++ D++GDG V+ EF
Sbjct: 84 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 143
Query: 66 LYQTI 70
+ T+
Sbjct: 144 MMMTV 148
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 102 bits (253), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
TE + F +FD++GDG IT +EL +++LG + EL M+ +ID +G+G VD EF
Sbjct: 10 TEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFL 69
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
+ M ++EAF VFD++G+G+++ ELR V+ LG K + E+ MI+
Sbjct: 70 GMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKL--SDEEVDEMIRA 127
Query: 125 VDVDGDGMVNYNEFKQMM 142
D DGDG VNY EF +++
Sbjct: 128 ADTDGDGQVNYEEFVRVL 145
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 100 bits (248), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 78/135 (57%), Gaps = 2/135 (1%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E + F +FD++GDG IT KEL ++LG + EL I ++D +G+G +D EF +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLT 71
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
++EAF VFD++G+GYI+ ELR V +LG K T E+ I++
Sbjct: 72 XXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEK--LTDEEVDQXIREA 129
Query: 126 DVDGDGMVNYNEFKQ 140
D+DGDG VNY EF Q
Sbjct: 130 DIDGDGQVNYEEFVQ 144
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 100 bits (248), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++GDG IT K+L +++LG + EL MI ++ +G+G +D +F
Sbjct: 311 AEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFL 370
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
++ M ++EAF VF ++G+GYI+ +LR V+ +LG K T E+ MI++
Sbjct: 371 TMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEK--LTDEEVDEMIRE 428
Query: 125 VDVDGDGMVNYNEFKQMM 142
+DGDG VNY +F QMM
Sbjct: 429 AGIDGDGQVNYEQFVQMM 446
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 100 bits (248), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 78/135 (57%), Gaps = 2/135 (1%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E + F +FD++GDG IT KEL ++LG + EL I ++D +G+G +D EF +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLT 70
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
++EAF VFD++G+GYI+ ELR V +LG K T E+ I++
Sbjct: 71 XXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEK--LTDEEVDEXIREA 128
Query: 126 DVDGDGMVNYNEFKQ 140
D+DGDG VNY EF Q
Sbjct: 129 DIDGDGQVNYEEFVQ 143
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 99.8 bits (247), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 78/135 (57%), Gaps = 2/135 (1%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E + F +FD++GDG IT KEL ++LG + EL I ++D +G+G ++ EF +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEFLT 70
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
++EAF VFD++G+GYI+ ELR V +LG K T E+ I++
Sbjct: 71 XXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEK--LTDEEVDEXIREA 128
Query: 126 DVDGDGMVNYNEFKQ 140
D+DGDG VNY EF Q
Sbjct: 129 DIDGDGQVNYEEFVQ 143
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 93.6 bits (231), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 2/138 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F FD+ G GKI +EL ++ LG + EL +I + + N +G ++ EF
Sbjct: 10 AEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFC 69
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
+ M M+EAF +FD++GDG+I+ ELR V+ +LG K T E+ MI++
Sbjct: 70 GIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEK--VTDEEIDEMIRE 127
Query: 125 VDVDGDGMVNYNEFKQMM 142
D DGDGM+NY EF M+
Sbjct: 128 ADFDGDGMINYEEFVWMI 145
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 4 DTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
+ E+R F++FDR+GDG I+ EL + NLG + D E+ +MI + D +GDG ++ EF
Sbjct: 82 EEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEF 141
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 84/149 (56%), Gaps = 7/149 (4%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++ +G I+ EL+ +++LG+ + E+ ++ +IDV+G+ ++ +EF
Sbjct: 11 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL 70
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKL--MI 122
+L + + EAF VFD+NGDG I+ EL+ VL S+G K + D ++ M+
Sbjct: 71 ALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEK----LTDAEVDDML 126
Query: 123 KKVDVDGDGMVNYNEFKQMMKGGGFAALR 151
++V DG G +N +F ++ G R
Sbjct: 127 REVS-DGSGEINIQQFAALLSKGSSTGTR 154
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 4 DTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
+ EL F++FD+NGDG I+ EL L ++G + D E+ M+ ++ +G G ++I +F
Sbjct: 83 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQF 141
Query: 64 GSL 66
+L
Sbjct: 142 AAL 144
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 79/139 (56%), Gaps = 3/139 (2%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++ G I+ EL+ +++LG+ + E+ ++ +IDV+G+ ++ +EF
Sbjct: 11 AEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFL 70
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
+L + + EAF VFD+NGDG I+ EL+ VL S+G K T + M+++
Sbjct: 71 ALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEK--LTDAEVDEMLRE 128
Query: 125 VDVDGDGMVNYNEFKQMMK 143
V DG G +N +F ++
Sbjct: 129 VS-DGSGEINIKQFAALLS 146
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 4 DTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
+ EL F++FD+NGDG I+ EL L ++G + D E+ +M+ ++ +G G ++I +F
Sbjct: 83 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQF 141
Query: 64 GSL 66
+L
Sbjct: 142 AAL 144
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 82.4 bits (202), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++ +G I+ EL+ +++LG+ + E+ ++ +IDV+G+ ++ +EF
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL 69
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
+L + + EAF VFD+NGDG I+ EL+ VL S+G K T + M+++
Sbjct: 70 ALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEK--LTDAEVDDMLRE 127
Query: 125 VDVDGDGMVNYNEFKQMMK 143
V DG G +N +F ++
Sbjct: 128 VS-DGSGEINIQQFAALLS 145
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 4 DTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
+ EL F++FD+NGDG I+ EL L ++G + D E+ M+ ++ +G G ++I +F
Sbjct: 82 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQF 140
Query: 64 GSL 66
+L
Sbjct: 141 AAL 143
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 79/143 (55%), Gaps = 5/143 (3%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F MFD +G G I+ KEL ++ LG EL +IE++D +G G +D EF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 65 SLYQTIMXXXX---XXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLM 121
+ M +++ F +FD+N DG+I +EEL +L + G + T ED + +
Sbjct: 80 VMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATG--EHVTEEDIEDL 137
Query: 122 IKKVDVDGDGMVNYNEFKQMMKG 144
+K D + DG ++++EF +MM+G
Sbjct: 138 MKDSDKNNDGRIDFDEFLKMMEG 160
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 5/143 (3%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F MFD +G G I+ KEL ++ LG EL +IE++D +G G +D EF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 65 SLYQTIMXXXX---XXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLM 121
+ M + + F +FD+N DG+I +EEL +L + G + T ED + +
Sbjct: 80 VMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATG--EHVTEEDIEDL 137
Query: 122 IKKVDVDGDGMVNYNEFKQMMKG 144
+K D + DG ++++EF +MM+G
Sbjct: 138 MKDSDKNNDGRIDFDEFLKMMEG 160
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 80.5 bits (197), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 73/138 (52%), Gaps = 2/138 (1%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E+R F +FD +G G I KEL +++ LG E+ +MI ID +G G +D EF
Sbjct: 9 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQ 68
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
+ M + +AF +FD + G I+ + L+ V LG + T E+ + MI +
Sbjct: 69 MMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELG--ENMTDEELQEMIDEA 126
Query: 126 DVDGDGMVNYNEFKQMMK 143
D DGDG VN EF ++MK
Sbjct: 127 DRDGDGEVNEEEFFRIMK 144
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 80.5 bits (197), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 79/145 (54%), Gaps = 5/145 (3%)
Query: 3 MDTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINE 62
M E + F MFD +G G I+ KEL ++ LG EL +IE++D +G G +D E
Sbjct: 18 MIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEE 77
Query: 63 FGSLYQTIMXXXXXXXXMKE---AFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCK 119
F + M +E F +FD+N DG+I +EEL +L + G + T ED +
Sbjct: 78 FLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATG--EHVTEEDIE 135
Query: 120 LMIKKVDVDGDGMVNYNEFKQMMKG 144
++K D + DG ++++EF +MM+G
Sbjct: 136 DLMKDSDKNNDGRIDFDEFLKMMEG 160
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 80.5 bits (197), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 79/145 (54%), Gaps = 5/145 (3%)
Query: 3 MDTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINE 62
M E + F MFD +G G I+ KEL ++ LG EL +IE++D +G G +D E
Sbjct: 15 MIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEE 74
Query: 63 FGSLYQTIMXXXXXXXXMKE---AFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCK 119
F + M +E F +FD+N DG+I +EEL +L + G + T ED +
Sbjct: 75 FLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATG--EHVTEEDIE 132
Query: 120 LMIKKVDVDGDGMVNYNEFKQMMKG 144
++K D + DG ++++EF +MM+G
Sbjct: 133 DLMKDSDKNNDGRIDFDEFLKMMEG 157
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 80.1 bits (196), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 83/143 (58%), Gaps = 7/143 (4%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
ELR F+ FD++ DG I ++L + ++ +G + EL+++ ++I++N G+VD ++F
Sbjct: 12 ELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVE 71
Query: 66 LYQTIMXXXXX----XXXMKEAFNVFDQNGDGYITVEELRSVL-ASLGLKQGRTVEDCKL 120
L + +++AF FD NGDG I+ ELR + A LG + G D +
Sbjct: 72 LMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHR--DIEE 129
Query: 121 MIKKVDVDGDGMVNYNEFKQMMK 143
+I+ VD++GDG V++ EF +MM
Sbjct: 130 IIRDVDLNGDGRVDFEEFVRMMS 152
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E+R F +FD +G G I KEL +++ LG E+ +MI +ID +G G +D EF +
Sbjct: 29 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLT 88
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
+ M + +AF +FD + G IT+++LR V LG + T E+ + MI +
Sbjct: 89 MMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELG--ENLTEEELQEMIAEA 146
Query: 126 DVDGDGMVNYNEFKQMMK 143
D + D ++ +EF ++MK
Sbjct: 147 DRNDDNEIDEDEFIRIMK 164
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 82/143 (57%), Gaps = 7/143 (4%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
ELR F+ FD++ DG I ++L + ++ +G + EL+++ ++I++N G+VD ++F
Sbjct: 12 ELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVE 71
Query: 66 LYQTIMXXXXX----XXXMKEAFNVFDQNGDGYITVEELRSVLAS-LGLKQGRTVEDCKL 120
L + +++AF FD NGDG I+ ELR + LG + G D +
Sbjct: 72 LMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHR--DIEE 129
Query: 121 MIKKVDVDGDGMVNYNEFKQMMK 143
+I+ VD++GDG V++ EF +MM
Sbjct: 130 IIRDVDLNGDGRVDFEEFVRMMS 152
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 5/145 (3%)
Query: 3 MDTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINE 62
M E + F MFD +G G I+ KEL ++ LG EL +IE++D +G G +D E
Sbjct: 15 MIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEE 74
Query: 63 FGSLYQTIMXXXX---XXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCK 119
F + M + E F +FD+N DGYI EEL + + G + T E+ +
Sbjct: 75 FLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASG--EHVTDEEIE 132
Query: 120 LMIKKVDVDGDGMVNYNEFKQMMKG 144
++K D + DG ++++EF +MM+G
Sbjct: 133 SLMKDGDKNNDGRIDFDEFLKMMEG 157
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 82/142 (57%), Gaps = 7/142 (4%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
ELR F+ FD++ DG I ++L + ++ +G + EL+++ ++I++N G+VD ++F
Sbjct: 26 ELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVE 85
Query: 66 LYQTIMXXXXX----XXXMKEAFNVFDQNGDGYITVEELRSVLAS-LGLKQGRTVEDCKL 120
L + +++AF FD NGDG I+ ELR + LG + G D +
Sbjct: 86 LMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHR--DIEE 143
Query: 121 MIKKVDVDGDGMVNYNEFKQMM 142
+I+ VD++GDG V++ EF +MM
Sbjct: 144 IIRDVDLNGDGRVDFEEFVRMM 165
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 5/145 (3%)
Query: 3 MDTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINE 62
M E + F MFD +G G I+ KEL ++ LG EL +IE++D +G G +D E
Sbjct: 15 MIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEE 74
Query: 63 FGSLYQTIMXXXX---XXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCK 119
F + M + E F +FD+N DGYI EEL + + G + T E+ +
Sbjct: 75 FLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASG--EHVTDEEIE 132
Query: 120 LMIKKVDVDGDGMVNYNEFKQMMKG 144
++K D + DG ++++EF +MM+G
Sbjct: 133 SLMKDGDKNNDGRIDFDEFLKMMEG 157
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 5/145 (3%)
Query: 3 MDTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINE 62
M E + F MFD +G G I+ KEL ++ LG EL +IE++D +G G +D E
Sbjct: 18 MIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEE 77
Query: 63 FGSLYQTIMXXXXXXXXMKE---AFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCK 119
F + M +E F +FD+N DG+I +EEL +L + G + ED +
Sbjct: 78 FLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATG--EHVIEEDIE 135
Query: 120 LMIKKVDVDGDGMVNYNEFKQMMKG 144
++K D + DG ++++EF +MM+G
Sbjct: 136 DLMKDSDKNNDGRIDFDEFLKMMEG 160
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 76.3 bits (186), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 64/106 (60%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++ +G I+ EL+ +++LG+ + E+ ++ +IDV+G+ ++ +EF
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL 69
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLK 110
+L + + EAF VFD+NGDG I+ EL+ VL S+G K
Sbjct: 70 ALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEK 115
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQ 140
KEAF +FD++ +G I+ EL +V+ SLGL + ++ ++DVDG+ + ++EF
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEA--EVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 141 MMK 143
+M
Sbjct: 71 LMS 73
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 4 DTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNEL 43
+ EL F++FD+NGDG I+ EL L ++G + D EL
Sbjct: 82 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEL 121
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 78/140 (55%), Gaps = 11/140 (7%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGSL 66
L+ +F+M D + G IT EL D LK +G + ++E+ +++ D++ G +D EF +
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEF--I 69
Query: 67 YQTI-MXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKL--MIK 123
T+ + + AF+ FD++G GYIT++E++ GL +D + MIK
Sbjct: 70 AATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGL------DDIHIDDMIK 123
Query: 124 KVDVDGDGMVNYNEFKQMMK 143
++D D DG ++Y EF MM+
Sbjct: 124 EIDQDNDGQIDYGEFAAMMR 143
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 76/142 (53%), Gaps = 8/142 (5%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
+L+ F D G G IT+ +L L+ G+ +P N ++++ID +G G +D EF
Sbjct: 56 KLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPN-FDLLLDQIDSDGSGNIDYTEF-- 112
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQG----RTVEDCKLM 121
L I + AF VFD + DG IT EL VL + G K+G R V K M
Sbjct: 113 LAAAIDRRQLSKKLIYCAFRVFDVDNDGEITTAELAHVLFN-GNKRGNITERDVNQVKKM 171
Query: 122 IKKVDVDGDGMVNYNEFKQMMK 143
I++VD +GDG +++ EF +MMK
Sbjct: 172 IREVDKNGDGKIDFYEFSEMMK 193
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 2/138 (1%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E+R F +FD +G G I KEL +++ LG E+ +MI +ID G G ++ +F +
Sbjct: 7 EIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLT 66
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
+ M + +AF +FD + G I+ + L+ V LG + T E+ + MI +
Sbjct: 67 VMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG--ENLTDEELQEMIDEA 124
Query: 126 DVDGDGMVNYNEFKQMMK 143
D DGDG V+ EF ++MK
Sbjct: 125 DRDGDGEVSEQEFLRIMK 142
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E+ F +FD N DG + EL ++K LG +P E++ +I++ D G + ++F
Sbjct: 24 EIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYI 83
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
+ + +K AF +FD + G I+++ LR V LG + T E+ + MI++
Sbjct: 84 VMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG--ETLTDEELRAMIEEF 141
Query: 126 DVDGDGMVNYNEF 138
D+DGDG +N NEF
Sbjct: 142 DLDGDGEINENEF 154
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 6/143 (4%)
Query: 6 ELRRVFQMFDRNG-DGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +F DG I+ KEL ++ LG EL +MI+++D +G G VD +EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 65 SLYQTIMXXXX---XXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLM 121
+ M + + F +FD+N DGYI +EEL+ +L + G + T +D + +
Sbjct: 79 VMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEEL 136
Query: 122 IKKVDVDGDGMVNYNEFKQMMKG 144
+K D + DG ++Y+EF + MKG
Sbjct: 137 MKDGDKNNDGRIDYDEFLEFMKG 159
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 6/143 (4%)
Query: 6 ELRRVFQMFDRNG-DGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +F DG I+ KEL ++ LG EL +MI+++D +G G VD +EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 65 SLYQTIMXXXX---XXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLM 121
+ M + + F +FD+N DGYI +EEL+ +L + G + T +D + +
Sbjct: 79 VMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEEL 136
Query: 122 IKKVDVDGDGMVNYNEFKQMMKG 144
+K D + DG ++Y+EF + MKG
Sbjct: 137 MKDGDKNNDGRIDYDEFLEFMKG 159
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 6/143 (4%)
Query: 6 ELRRVFQMFDRNG-DGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +F DG I+ KEL ++ LG EL +MI+++D +G G VD +EF
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 65 SLYQTIMXXXX---XXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLM 121
+ M + + F +FD+N DGYI +EEL+ +L + G + T +D + +
Sbjct: 79 VMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEEL 136
Query: 122 IKKVDVDGDGMVNYNEFKQMMKG 144
+K D + DG ++Y+EF + MKG
Sbjct: 137 MKDGDKNNDGRIDYDEFLEFMKG 159
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 77/141 (54%), Gaps = 6/141 (4%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
+++ FQ+FD++ DGK++ +EL +L++LG P N + I K +N + D+ F +
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSLGKN-PTNAELNTI-KGQLNAKEF-DLATFKT 62
Query: 66 LY-QTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
+Y + I M +AF D+ G+G I ELR +L +LG T + + ++K+
Sbjct: 63 VYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLG--DALTSSEVEELMKE 120
Query: 125 VDVDGDGMVNYNEFKQMMKGG 145
V V GDG +NY F M+ G
Sbjct: 121 VSVSGDGAINYESFVDMLVTG 141
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 9/142 (6%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF--G 64
L+ F D + G+IT +EL LK +G + ++E++ + + DV+ G +D EF
Sbjct: 29 LKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYKEFIAA 88
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
+L+ + + AF FD++G GYIT +EL+ G++ R E + +
Sbjct: 89 TLH---LNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEE----LXRD 141
Query: 125 VDVDGDGMVNYNEFKQMMKGGG 146
VD D DG ++YNEF + G
Sbjct: 142 VDQDNDGRIDYNEFVAXXQKGS 163
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 78/142 (54%), Gaps = 8/142 (5%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
+L+ F + D +G G IT+++L L+ G+ +P N ++++ID +G G +D EF
Sbjct: 53 KLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYN-FDLLLDQIDSDGSGKIDYTEF-- 109
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQG----RTVEDCKLM 121
+ + + AF VFD + DG IT EL +L + G K+G R V K M
Sbjct: 110 IAAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYN-GNKKGNITQRDVNRVKRM 168
Query: 122 IKKVDVDGDGMVNYNEFKQMMK 143
I+ VD + DG ++++EF +MMK
Sbjct: 169 IRDVDKNNDGKIDFHEFSEMMK 190
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 69.3 bits (168), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 67 YQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVD 126
+Q++M ++EAF V D++G+GYI+ ELR V+ +LG K T E+ MI++ D
Sbjct: 18 FQSLMKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIREAD 75
Query: 127 VDGDGMVNYNEFKQMMKG 144
+DGDG VNY EF QMM
Sbjct: 76 IDGDGQVNYEEFVQMMTA 93
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%)
Query: 4 DTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
+ E+R F++ D++G+G I+ EL + NLG + D E+ +MI + D++GDG V+ EF
Sbjct: 28 EEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 87
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 69.3 bits (168), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 2/133 (1%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E+ F +FD N DG + EL + K LG +P E++ +I++ D G ++F
Sbjct: 24 EIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYDDFYI 83
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
+ + +K AF +FD + G I+++ LR V LG + T E+ + I++
Sbjct: 84 VXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG--ETLTDEELRAXIEEF 141
Query: 126 DVDGDGMVNYNEF 138
D+DGDG +N NEF
Sbjct: 142 DLDGDGEINENEF 154
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++ D+DGDG VNY EF
Sbjct: 7 IREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 140 QMMKG 144
QMM
Sbjct: 65 QMMTA 69
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E+R F++FD++G+G I+ EL + NLG + D E+ +MI + D++GDG V+ EF
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++ D+DGDG VNY EF
Sbjct: 8 IREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIREADIDGDGQVNYEEFV 65
Query: 140 QMMKG 144
QMM
Sbjct: 66 QMMTA 70
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E+R F++FD++G+G I+ EL + NLG + D E+ +MI + D++GDG V+ EF
Sbjct: 7 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 64
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++ D+DGDG VNY EF
Sbjct: 10 IREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIREADIDGDGQVNYEEFV 67
Query: 140 QMMKG 144
QMM
Sbjct: 68 QMMTA 72
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E+R F++FD++G+G I+ EL + NLG + D E+ +MI + D++GDG V+ EF
Sbjct: 9 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 66
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++ D+DGDG VNY EF
Sbjct: 4 IREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIREADIDGDGQVNYEEFV 61
Query: 140 QMMKG 144
QMM
Sbjct: 62 QMMTA 66
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 4 DTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
+ E+R F++FD++G+G I+ EL + NLG + D E+ +MI + D++GDG V+ EF
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 2/63 (3%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++ D+DGDG VNY EF
Sbjct: 7 IREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 140 QMM 142
QMM
Sbjct: 65 QMM 67
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 4 DTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
+ E+R F++FD++G+G I+ EL + NLG + D E+ +MI + D++GDG V+ EF
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
++EAF VFD++G+GYI+ ELR V+ +LG K T E+ MI++ D+DGDG VNY EF
Sbjct: 11 IREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIREADIDGDGQVNYEEFV 68
Query: 140 QMMKG 144
QMM
Sbjct: 69 QMMTA 73
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E+R F++FD++G+G I+ EL + NLG + D E+ +MI + D++GDG V+ EF
Sbjct: 10 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 67
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 6/143 (4%)
Query: 6 ELRRVFQMFDRNG-DGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +F DG I+ KEL ++ LG EL +MI+++D +G G VD +EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 65 SLYQTIMXXXX---XXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLM 121
+ M + + F ++D+N DGYI ++EL+ +L + G + T +D + +
Sbjct: 79 VMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATG--ETITEDDIEEL 136
Query: 122 IKKVDVDGDGMVNYNEFKQMMKG 144
+K D + DG ++Y+EF + MKG
Sbjct: 137 MKDGDKNNDGRIDYDEFLEFMKG 159
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 6/143 (4%)
Query: 6 ELRRVFQMFDRNG-DGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +F DG I+ KEL ++ LG EL +MI+++D +G G VD +EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 65 SLYQTIMXXXX---XXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLM 121
+ M + + F +FD+N DGYI ++EL+ +L + G + T +D + +
Sbjct: 79 VMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATG--ETITEDDIEEL 136
Query: 122 IKKVDVDGDGMVNYNEFKQMMKG 144
+K D + DG ++Y+E+ + MKG
Sbjct: 137 MKDGDKNNDGRIDYDEWLEFMKG 159
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 7/144 (4%)
Query: 7 LRRVFQMFDR-NGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
L F+ F+ G G+++ ++ L+ LGI + + Q+I++ D G+G +D + F
Sbjct: 15 LETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKI 74
Query: 66 LYQTIMXXXXXXXXM----KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLM 121
+ + M +EAF ++D+ G+GYI+ + +R +LA L + + ED M
Sbjct: 75 IGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAE--LDETLSSEDLDAM 132
Query: 122 IKKVDVDGDGMVNYNEFKQMMKGG 145
I ++D DG G V++ EF +M GG
Sbjct: 133 IDEIDADGSGTVDFEEFMGVMTGG 156
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 3 MDTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINE 62
M ELR F+++D+ G+G I+ + + L L + +L MI++ID +G G VD E
Sbjct: 89 MQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEE 148
Query: 63 F 63
F
Sbjct: 149 F 149
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 78/143 (54%), Gaps = 6/143 (4%)
Query: 6 ELRRVFQMFDRNG-DGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +F DG I+ KEL ++ LG EL +MI+++D +G G VD +EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 65 SLYQTIMXXXXXXXXMKEAFNVF---DQNGDGYITVEELRSVLASLGLKQGRTVEDCKLM 121
+ M +E ++F D+N DGYI ++EL+ +L + G + T +D + +
Sbjct: 79 VMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATG--ETITEDDIEEL 136
Query: 122 IKKVDVDGDGMVNYNEFKQMMKG 144
+K D + DG ++Y+EF + MKG
Sbjct: 137 MKDGDKNNDGRIDYDEFLEFMKG 159
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 66.6 bits (161), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 6/143 (4%)
Query: 6 ELRRVFQMFDRNG-DGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +F DG I+ KEL ++ LG EL +MI+++D +G G VD +EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 65 SLYQTIMXXXX---XXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLM 121
+ M + + F +FD+N DGYI ++EL+ +L + G + T +D + +
Sbjct: 79 VMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATG--ETITEDDIEEL 136
Query: 122 IKKVDVDGDGMVNYNEFKQMMKG 144
+K D + DG ++Y+E + MKG
Sbjct: 137 MKDGDKNNDGRIDYDEXLEFMKG 159
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 2/63 (3%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
+KEAF VFD++ +GYI+ ELR V+ +LG K T E+ + MIK+ D+DGDG VNY EF
Sbjct: 11 LKEAFKVFDKDQNGYISASELRHVMINLGEK--LTDEEVEQMIKEADLDGDGQVNYEEFV 68
Query: 140 QMM 142
+MM
Sbjct: 69 KMM 71
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 3 MDT----ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYV 58
MDT EL+ F++FD++ +G I+ EL + NLG + D E+ QMI++ D++GDG V
Sbjct: 3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQV 62
Query: 59 DINEFGSLYQTI 70
+ EF + T+
Sbjct: 63 NYEEFVKMMMTV 74
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 2/63 (3%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
+KEAF VFD++ +GYI+ ELR V+ +LG K T E+ + MIK+ D+DGDG VNY EF
Sbjct: 6 LKEAFKVFDKDQNGYISASELRHVMINLGEK--LTDEEVEQMIKEADLDGDGQVNYEEFV 63
Query: 140 QMM 142
+MM
Sbjct: 64 KMM 66
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%)
Query: 4 DTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
+ EL+ F++FD++ +G I+ EL + NLG + D E+ QMI++ D++GDG V+ EF
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 62
Query: 64 GSLYQTI 70
+ T+
Sbjct: 63 VKMMMTV 69
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 83 AFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMM 142
AF FDQ+GDG+ITV+ELR +A LG Q E+ MI++ DVD DG VNY EF +M+
Sbjct: 11 AFRAFDQDGDGHITVDELRRAMAGLG--QPLPQEELDAMIREADVDQDGRVNYEEFARML 68
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
+L+ F+ FD++GDG IT EL ++ LG +P EL MI + DV+ DG V+ EF
Sbjct: 7 DLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFAR 66
Query: 66 L 66
+
Sbjct: 67 M 67
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 115 VEDCKLMIKKVDVDGDGMVNYNEFKQMMKGGG 146
+ED ++ + D DGDG + +E ++ M G G
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLG 36
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
++EAF VFD++G+GYI+ +LR V+ +LG K T E+ MI++ D+DGDG VNY +F
Sbjct: 9 IREAFRVFDKDGNGYISAADLRHVMTNLGEK--LTDEEVDEMIREADIDGDGQVNYEDFV 66
Query: 140 QMMKG 144
QMM
Sbjct: 67 QMMTA 71
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 3 MDT----ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYV 58
MDT E+R F++FD++G+G I+ +L + NLG + D E+ +MI + D++GDG V
Sbjct: 1 MDTDSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 60
Query: 59 DINEF 63
+ +F
Sbjct: 61 NYEDF 65
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 79/146 (54%), Gaps = 13/146 (8%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLG------IYIP--DNELVQMIEKIDVNGDGY 57
EL +F+ D+NGDG++ R+EL D L +P ++E+ ++ D + +GY
Sbjct: 64 ELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGY 123
Query: 58 VDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVED 117
+D +EF ++ ++ AF FDQ+G+G I+V+EL SV L + +T
Sbjct: 124 IDYSEFVTVAMD-RKSLLSKDKLESAFQKFDQDGNGKISVDELASVFG-LDHLESKT--- 178
Query: 118 CKLMIKKVDVDGDGMVNYNEFKQMMK 143
K MI +D + DG V++ EF +M++
Sbjct: 179 WKEMISGIDSNNDGDVDFEEFCKMIQ 204
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNLGI-YIPDNELVQMIEKIDVNGDGYVDINEFGS 65
L FQ FD++G+GKI+ EL+ G+ ++ +MI ID N DG VD EF
Sbjct: 145 LESAFQKFDQDGNGKISVDELASV---FGLDHLESKTWKEMISGIDSNNDGDVDFEEFCK 201
Query: 66 LYQTI 70
+ Q +
Sbjct: 202 MIQKL 206
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 9/141 (6%)
Query: 4 DTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
D+ ++ F +FDR+G G+I + + D L+ G N + I +I+ VD+ +F
Sbjct: 4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRACG----QNPTLAEITEIESTLPAEVDMEQF 59
Query: 64 GSLYQTI--MXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLM 121
+ + F VFD++ G I V ELR VL SLG K E+ +
Sbjct: 60 LQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSN--EEMDEL 117
Query: 122 IKKVDVDGDGMVNYNEFKQMM 142
+K V V DGMVNY++F QM+
Sbjct: 118 LKGVPVK-DGMVNYHDFVQMI 137
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 79/146 (54%), Gaps = 13/146 (8%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLG------IYIP--DNELVQMIEKIDVNGDGY 57
EL +F+ D+NGDG++ R+EL D L +P ++E+ ++ D + +GY
Sbjct: 347 ELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGY 406
Query: 58 VDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVED 117
+D +EF ++ ++ AF FDQ+G+G I+V+EL SV L + +T
Sbjct: 407 IDYSEFVTVAMD-RKSLLSKDKLESAFQKFDQDGNGKISVDELASVFG-LDHLESKT--- 461
Query: 118 CKLMIKKVDVDGDGMVNYNEFKQMMK 143
K MI +D + DG V++ EF +M++
Sbjct: 462 WKEMISGIDSNNDGDVDFEEFCKMIQ 487
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGI-YIPDNELVQMIEKIDVNGDGYVDINEFG 64
+L FQ FD++G+GKI+ EL+ G+ ++ +MI ID N DG VD EF
Sbjct: 427 KLESAFQKFDQDGNGKISVDELASV---FGLDHLESKTWKEMISGIDSNNDGDVDFEEFC 483
Query: 65 SLYQTI 70
+ Q +
Sbjct: 484 KMIQKL 489
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 3 MDTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINE 62
M ++ R+F+ FD NGDGKI+ EL+D+L+ LG D E+ +M+ +ID +GDG++D NE
Sbjct: 1 MADDMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNE 59
Query: 63 FGSL 66
F S
Sbjct: 60 FISF 63
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEF 138
M+ F FD NGDG I++ EL L +LG + ++ + M+ ++D DGDG +++NEF
Sbjct: 5 MERIFKRFDTNGDGKISLSELTDALRTLG---STSADEVQRMMAEIDTDGDGFIDFNEF 60
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
++ R+F+ FD NGDGKI+ EL+D+L+ LG D E+ +M+ +ID +GDG++D NEF S
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFIS 61
Query: 66 L 66
Sbjct: 62 F 62
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEF 138
M+ F FD NGDG I++ EL L +LG + ++ + M+ ++D DGDG +++NEF
Sbjct: 4 MERIFKRFDTNGDGKISLSELTDALRTLG---STSADEVQRMMAEIDTDGDGFIDFNEF 59
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
+KEAF VFD++ +G+I+ ELR V+ +LG K T E+ MI++ DVDGDG +NY EF
Sbjct: 6 LKEAFRVFDKDQNGFISAAELRHVMTNLGEK--LTDEEVDEMIREADVDGDGQINYEEFV 63
Query: 140 QMM 142
++M
Sbjct: 64 KVM 66
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%)
Query: 4 DTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
+ EL+ F++FD++ +G I+ EL + NLG + D E+ +MI + DV+GDG ++ EF
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 62
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 9 RVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
R+F+ FD NGDGKI+ EL D+LK LG PD E+ +M+ +ID +GDG++ +EF
Sbjct: 15 RIFKRFDTNGDGKISSSELGDALKTLGSVTPD-EVRRMMAEIDTDGDGFISFDEF 68
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 84 FNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMMK 143
F FD NGDG I+ EL L +LG T ++ + M+ ++D DGDG ++++EF +
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLG---SVTPDEVRRMMAEIDTDGDGFISFDEFTDFAR 73
Query: 144 G 144
Sbjct: 74 A 74
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQ 140
KEAF++FD++GDG IT +EL +V+ SLG Q T + + MI +VD DGDG +++ EF
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Query: 141 MM 142
MM
Sbjct: 71 MM 72
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E + F +FD++GDG IT KEL +++LG + EL MI ++D +GDG +D EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 68
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQ 140
KEAF +FD++GDG ITVEEL +V+ S L Q T E+ + MI +VD DG+G + ++EF
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRS--LDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
Query: 141 MM 142
+M
Sbjct: 71 LM 72
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 40/61 (65%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
+ + F +FD++GDG IT +EL+ +++L + EL MI ++D +G+G ++ +EF S
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
Query: 66 L 66
L
Sbjct: 71 L 71
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQ 140
KEAF +FD++GDG ITVEEL +V+ S L Q T E+ + MI +VD DG+G + ++EF
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRS--LDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
Query: 141 MM 142
+M
Sbjct: 71 LM 72
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 40/61 (65%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
+ + F +FD++GDG IT +EL+ +++L + EL MI ++D +G+G ++ +EF S
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
Query: 66 L 66
L
Sbjct: 71 L 71
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E R+F+ FD NGDGKI+ EL ++LK LG PD E+ M+ +ID +GDG++ EF
Sbjct: 9 AERERIFKRFDANGDGKISAAELGEALKTLGSITPD-EVKHMMAEIDTDGDGFISFQEF 66
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 84 FNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEF 138
F FD NGDG I+ EL L +LG T ++ K M+ ++D DGDG +++ EF
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLG---SITPDEVKHMMAEIDTDGDGFISFQEF 66
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Query: 82 EAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQM 141
EAF VFD++G+G I+ ELR V+ +LG K T ++ MI++ D+DGDG +NY EF +M
Sbjct: 12 EAFKVFDRDGNGLISAAELRHVMTNLGEKL--TDDEVDEMIREADIDGDGHINYEEFVRM 69
Query: 142 M 142
M
Sbjct: 70 M 70
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 41/60 (68%)
Query: 4 DTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
+ EL F++FDR+G+G I+ EL + NLG + D+E+ +MI + D++GDG+++ EF
Sbjct: 7 EEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 66
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E + F M D+N DG I +++L D L ++G D L M+ + G ++ F +
Sbjct: 8 EFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINFTMFLT 63
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
++ + ++ AF FD+ G+I + LR +L ++G + T E+ M ++
Sbjct: 64 MFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDR--FTDEEVDEMYREA 121
Query: 126 DVDGDGMVNYNEFKQMMKGGG 146
+D G NY EF +++K G
Sbjct: 122 PIDKKGNFNYVEFTRILKHGA 142
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 22/151 (14%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKN-----------LGIYIPDNELVQMIEKIDVNG 54
EL +F D+NGDG++ R EL + K L ++E+ Q+++ +D +
Sbjct: 360 ELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDK 419
Query: 55 DGYVDINEFGSLY---QTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQ 111
+GY++ +EF ++ +T++ ++ AF +FD + G I+ EL ++ +
Sbjct: 420 NGYIEYSEFVTVAMDRKTLL----SRERLERAFRMFDSDNSGKISSTELATIFGVSDVDS 475
Query: 112 GRTVEDCKLMIKKVDVDGDGMVNYNEFKQMM 142
E K ++ +VD + DG V+++EF+QM+
Sbjct: 476 ----ETWKSVLSEVDKNNDGEVDFDEFQQML 502
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 22/151 (14%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKN-----------LGIYIPDNELVQMIEKIDVNG 54
EL +F D+NGDG++ R EL + K L ++E+ Q+++ +D +
Sbjct: 359 ELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDK 418
Query: 55 DGYVDINEFGSLY---QTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQ 111
+GY++ +EF ++ +T++ ++ AF +FD + G I+ EL ++ +
Sbjct: 419 NGYIEYSEFVTVAMDRKTLL----SRERLERAFRMFDSDNSGKISSTELATIFGVSDVDS 474
Query: 112 GRTVEDCKLMIKKVDVDGDGMVNYNEFKQMM 142
E K ++ +VD + DG V+++EF+QM+
Sbjct: 475 ----ETWKSVLSEVDKNNDGEVDFDEFQQML 501
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
+E + F++FD G IT++ L LK G+ + +M + D G+G + EF
Sbjct: 6 SEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFL 65
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLG 108
S+ M +++AF FD G GYI L+ L +LG
Sbjct: 66 SMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLG 109
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKL--MIKKVDVDGDGMVNYNE 137
KEAF +FD G+IT E L++VL G++ VE M + D G+G + + E
Sbjct: 8 FKEAFELFDSERTGFITKEGLQTVLKQFGVR----VEPAAFNEMFNEADATGNGKIQFPE 63
Query: 138 FKQMM 142
F MM
Sbjct: 64 FLSMM 68
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMI-----EKIDVNGDGYVD 59
LR+ F+ FD G G I + L D+L NLG + +E + + EK + D +++
Sbjct: 81 LRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITETEKGQIRYDNFIN 138
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 22/151 (14%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKN-----------LGIYIPDNELVQMIEKIDVNG 54
EL +F D+NGDG++ R EL + K L ++E+ Q+++ +D +
Sbjct: 336 ELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDK 395
Query: 55 DGYVDINEFGSLY---QTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQ 111
+GY++ +EF ++ +T++ ++ AF +FD + G I+ EL ++ +
Sbjct: 396 NGYIEYSEFVTVAMDRKTLL----SRERLERAFRMFDSDNSGKISSTELATIFGVSDVDS 451
Query: 112 GRTVEDCKLMIKKVDVDGDGMVNYNEFKQMM 142
E K ++ +VD + DG V+++EF+QM+
Sbjct: 452 ----ETWKSVLSEVDKNNDGEVDFDEFQQML 478
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQ 140
KEAF++FD++GDG IT +EL +V+ SLG Q T + + MI +VD DG+G +++ EF
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 141 MM 142
MM
Sbjct: 71 MM 72
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQ 140
KEAF++FD++GDG IT +EL +V+ SLG Q T + + MI +VD DG+G +++ EF
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 141 MM 142
MM
Sbjct: 72 MM 73
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQ 140
KEAF++FD++GDG IT +EL +V+ SLG Q T + + MI +VD DG+G +++ EF
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 141 MM 142
MM
Sbjct: 71 MM 72
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQ 140
KEAF++FD++GDG IT +EL +V+ SLG Q T + + MI +VD DG+G +++ EF
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 141 MM 142
MM
Sbjct: 71 MM 72
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQ 140
KEAF++FD++GDG IT +EL +V+ SLG Q T + + MI +VD DG+G +++ EF
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 141 MM 142
MM
Sbjct: 71 MM 72
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQ 140
KEAF++FD++GDG IT +EL +V+ SLG Q T + + MI +VD DG+G +++ EF
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 141 MM 142
MM
Sbjct: 71 MM 72
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQ 140
KEAF++FD++GDG IT +EL +V+ SLG Q T + + MI +VD DG+G +++ EF
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 141 MM 142
MM
Sbjct: 71 MM 72
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQ 140
KEAF++FD++GDG IT +EL +V+ SLG Q T + + MI +VD DG+G +++ EF
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 141 MM 142
MM
Sbjct: 71 MM 72
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 66 LYQTIMXXXXXXXXMKEAF 84
+ M ++EAF
Sbjct: 71 MMARKMKDTDSEEEIREAF 89
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 42 ELVQMIEKIDVNGDGYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELR 101
EL MI ++D +G+G +D EF ++ M ++EAF VFD++G+GYI+ ELR
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 61
Query: 102 SVLASLG 108
V+ +LG
Sbjct: 62 HVMTNLG 68
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLG 35
E+R F++FD++G+G I+ EL + NLG
Sbjct: 39 EIREAFRVFDKDGNGYISAAELRHVMTNLG 68
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 121 MIKKVDVDGDGMVNYNEFKQMM 142
MI +VD DG+G +++ EF MM
Sbjct: 6 MINEVDADGNGTIDFPEFLTMM 27
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQ 140
KEAF++FD++GDG IT +EL +V+ SLG Q T + + MI +VD DG+G +++ EF
Sbjct: 13 KEAFSLFDKDGDGCITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 141 MM 142
+M
Sbjct: 71 LM 72
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
+E + F +FD++GDG IT KEL +++LG + EL MI ++D +G+G +D EF
Sbjct: 10 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 65 SL 66
+L
Sbjct: 70 NL 71
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 57.0 bits (136), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 16/148 (10%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKN-----------LGIYIPDNELVQMIEKIDVNG 54
EL +F D+NGDG++ R EL + K L ++E+ Q+++ +D +
Sbjct: 336 ELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAVDFDK 395
Query: 55 DGYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRT 114
+GY++ +EF ++ ++ AF FD + G I+ EL ++ +
Sbjct: 396 NGYIEYSEFVTVAXD-RKTLLSRERLERAFRXFDSDNSGKISSTELATIFGVSDVDS--- 451
Query: 115 VEDCKLMIKKVDVDGDGMVNYNEFKQMM 142
E K ++ +VD + DG V+++EF+Q +
Sbjct: 452 -ETWKSVLSEVDKNNDGEVDFDEFQQXL 478
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMI--EKIDVNGDGYVDINE 62
E + FQ+FDR GDGKI + D ++ LG + E+++++ K D + +
Sbjct: 7 AEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQ 66
Query: 63 FGSLYQTIMXXXXX--XXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKL 120
F + QTI E VFD+ G+G + E+R VL +LG K T E+ +
Sbjct: 67 FLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKM--TEEEVEQ 124
Query: 121 MIKKVDVDGDGMVNYNEFKQMMKGG 145
++ + D +G +NY E +M+ G
Sbjct: 125 LVAGHE-DSNGCINYEELVRMVLSG 148
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQ 140
KEAF+++D++GDG IT +EL +V+ SLGL T + + MI +VD DG+G +++ EF
Sbjct: 13 KEAFSLYDKDGDGTITTKELGTVMRSLGLNP--TEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 141 MM 142
MM
Sbjct: 71 MM 72
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E + F ++D++GDG IT KEL +++LG+ + EL MI ++D +G+G +D EF +
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 66 LYQTIM 71
+ IM
Sbjct: 71 MMARIM 76
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMI--EKIDVNGDGYVDINE 62
E + FQ+FDR GDGKI + D ++ LG + E+++++ K D + +
Sbjct: 9 AEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQ 68
Query: 63 FGSLYQTIMXXXXXXXXMK--EAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKL 120
F + QTI E VFD+ G+G + E+R VL +LG K T E+ +
Sbjct: 69 FLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKM--TEEEVEQ 126
Query: 121 MIKKVDVDGDGMVNYNEFKQMMKGG 145
++ + D +G +NY E +M+ G
Sbjct: 127 LVAGHE-DSNGCINYEELVRMVLSG 150
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 9/140 (6%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGSL 66
LR +F D + G ++ +E+ D LK +G ++ Q++ ID N G + +F L
Sbjct: 59 LRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDF--L 116
Query: 67 YQTIMXXXXXXXXMKE----AFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMI 122
TI KE F FD +G+G I+VEEL+ + ++ + ++
Sbjct: 117 AATI---DKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLL 173
Query: 123 KKVDVDGDGMVNYNEFKQMM 142
++VD++GDG ++++EF MM
Sbjct: 174 QEVDLNGDGEIDFHEFMLMM 193
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGSL 66
L R F+ DR+G + E L LG+ + E + K D NG G +D+ EF
Sbjct: 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRA 98
Query: 67 YQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVL---ASLGLKQGRTVEDCKLMIK 123
+ M + AF D++GDG +TV++LR V A ++ G ED +++ +
Sbjct: 99 LRPPM-SQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTED-EVLRR 156
Query: 124 KVD----VDGDGMVNYNEFKQMMKG 144
+D + DG V EF+ G
Sbjct: 157 FLDNFDSSEKDGQVTLAEFQDYYSG 181
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 1 IIMD-TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVD 59
+++D E V + +DRNG G + +E +L+ + + K+D +GDG V
Sbjct: 68 LVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVT 127
Query: 60 INEFGSLY 67
+++ +Y
Sbjct: 128 VDDLRGVY 135
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 11/113 (9%)
Query: 43 LVQMIEKIDVNGDGYVDINEFGSLYQTIMXXXXXXXXMKEAFNV---FDQNGDGYITVEE 99
L + ++D +G +D +EF + + EA V +D+NG G + +EE
Sbjct: 39 LARFFRQLDRDGSRSLDADEF----RQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEE 94
Query: 100 -LRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMMKGGGFAALR 151
LR++ + + + K+D GDG+V ++ + + G +R
Sbjct: 95 FLRALRPPMSQAREAVI---AAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVR 144
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 16/149 (10%)
Query: 6 ELRRVFQMFDRNGDGKITRKEL-----------SDSLKNLGIYIPDNELVQMIEKIDVNG 54
EL ++F+ D NGDG++ RKEL D++ +L + E+ +++ +D +
Sbjct: 41 ELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDR 100
Query: 55 DGYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRT 114
+GY++ +EF ++ + AF FD +G G IT EEL + +
Sbjct: 101 NGYIEYSEFVTVCMDKQLLLSRERLLA-AFQQFDSDGSGKITNEELGRLFGVTEVDD--- 156
Query: 115 VEDCKLMIKKVDVDGDGMVNYNEFKQMMK 143
E ++++ D + DG V++ EF +MM+
Sbjct: 157 -ETWHQVLQECDKNNDGEVDFEEFVEMMQ 184
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELV-QMIEKIDVNGDGYVDINEFGS 65
L FQ FD +G GKIT +EL + G+ D+E Q++++ D N DG VD EF
Sbjct: 125 LLAAFQQFDSDGSGKITNEELG---RLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVE 181
Query: 66 LYQTI 70
+ Q I
Sbjct: 182 MMQKI 186
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 7/137 (5%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMI--EKIDVNGDGYVDINEF 63
E + F++FDR GDGKI + D ++ LG + E+++++ K D VD F
Sbjct: 11 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETF 70
Query: 64 GSLYQTIMXX--XXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLM 121
+ Q + E F VFD+ G+G + ELR VL +LG K T E+ + +
Sbjct: 71 LPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKM--TEEEVETV 128
Query: 122 IKKVDVDGDGMVNYNEF 138
+ + D +G +NY F
Sbjct: 129 LAGHE-DSNGCINYEAF 144
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
++EAF ++D+ G+GYI+ + +R +LA L + + ED MI ++D DG G V++ EF
Sbjct: 5 LREAFRLYDKEGNGYISTDVMREILAE--LDETLSSEDLDAMIDEIDADGSGTVDFEEFM 62
Query: 140 QMMKGG 145
+M GG
Sbjct: 63 GVMTGG 68
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 3 MDTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINE 62
M ELR F+++D+ G+G I+ + + L L + +L MI++ID +G G VD E
Sbjct: 1 MQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEE 60
Query: 63 F 63
F
Sbjct: 61 F 61
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 48/62 (77%), Gaps = 2/62 (3%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDN-ELVQMIEKIDVNGDGYVDINEFG 64
E+R F++FDR+G+G I+++EL ++++LG Y+P+ EL +I+++D++GDG VD EF
Sbjct: 37 EIREAFKVFDRDGNGFISKQELGTAMRSLG-YMPNEVELEVIIQRLDMDGDGQVDFEEFV 95
Query: 65 SL 66
+L
Sbjct: 96 TL 97
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
++EAF VFD++G+G+I+ +EL + + SLG + +++I+++D+DGDG V++ EF
Sbjct: 38 IREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEV--ELEVIIQRLDMDGDGQVDFEEFV 95
Query: 140 QMM 142
++
Sbjct: 96 TLL 98
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 16/149 (10%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDN-----------ELVQMIEKIDVNG 54
EL ++F+ D NGDG++ RKEL + + L + D E+ +++ +D +
Sbjct: 315 ELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDR 374
Query: 55 DGYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRT 114
+GY++ +EF ++ + AF FD +G G IT EEL + +
Sbjct: 375 NGYIEYSEFVTVCMDKQLLLSRERLLA-AFQQFDSDGSGKITNEELGRLFGVTEVDD--- 430
Query: 115 VEDCKLMIKKVDVDGDGMVNYNEFKQMMK 143
E ++++ D + DG V++ EF +MM+
Sbjct: 431 -ETWHQVLQECDKNNDGEVDFEEFVEMMQ 458
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNE-LVQMIEKIDVNGDGYVDINEFGS 65
L FQ FD +G GKIT +EL + G+ D+E Q++++ D N DG VD EF
Sbjct: 399 LLAAFQQFDSDGSGKITNEELG---RLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVE 455
Query: 66 LYQTI 70
+ Q I
Sbjct: 456 MMQKI 460
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 26/146 (17%)
Query: 8 RRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGD------------ 55
+ +F +FD+ G G I + L D L+ +G Y P N+LVQ I +N D
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIG-YNPTNQLVQDI----INADSSLRDASSLTLD 61
Query: 56 ---GYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQG 112
G +++NE + +AF VFD+ G ++V +LR +L LG K
Sbjct: 62 QITGLIEVNE----KELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEK-- 115
Query: 113 RTVEDCKLMIKKVDVDGDGMVNYNEF 138
T + ++K V+VD +G ++Y +F
Sbjct: 116 LTDAEVDELLKGVEVDSNGEIDYKKF 141
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 79/150 (52%), Gaps = 23/150 (15%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSD-------------SLKNLGIYIPDNELVQMIEKIDV 52
EL +F+ D+NGDG++ +KEL + LKN+ + E+ +++++D
Sbjct: 356 ELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNV-----EEEVDNILKEVDF 410
Query: 53 NGDGYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQG 112
+ +GY++ +EF S+ ++ AFN+FD + G IT EEL ++ + +
Sbjct: 411 DKNGYIEYSEFISVCMD-KQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSISE- 468
Query: 113 RTVEDCKLMIKKVDVDGDGMVNYNEFKQMM 142
+T D ++ + D + D M++++EF MM
Sbjct: 469 KTWND---VLGEADQNKDNMIDFDEFVSMM 495
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 1 IIMDTELRRVFQMFDRNGDGKITRKELSDSLKNLGI-YIPDNELVQMIEKIDVNGDGYVD 59
+ + LRR F +FD + GKIT++EL++ G+ I + ++ + D N D +D
Sbjct: 431 LFSEERLRRAFNLFDTDKSGKITKEELANL---FGLTSISEKTWNDVLGEADQNKDNMID 487
Query: 60 INEFGSLYQTI 70
+EF S+ I
Sbjct: 488 FDEFVSMMHKI 498
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 10/132 (7%)
Query: 10 VFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEK-IDVNGDGYVDINEFGSLYQ 68
+F+ D NGDG ++ +E+ + + I + +L+Q+I K ID +G+G +D NEF Y
Sbjct: 5 LFKEIDVNGDGAVSYEEVK-AFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 69 TIMXXXXXXXX--MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVD 126
+I +K + + D +GDG +T EE+ S G +E + K D
Sbjct: 64 SIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG------IEKVAEQVMKAD 117
Query: 127 VDGDGMVNYNEF 138
+GDG + EF
Sbjct: 118 ANGDGYITLEEF 129
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
L+ ++++ D +GDGK+T++E++ K GI ++ + + K D NGDGY+ + EF
Sbjct: 77 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANGDGYITLEEF 129
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 118 CKLMIKKVDVDGDGMVNYNEFKQMM 142
+ + K++DV+GDG V+Y E K +
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFV 26
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 10/132 (7%)
Query: 10 VFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEK-IDVNGDGYVDINEFGSLYQ 68
+F+ D NGDG ++ +E+ + + I + +L+Q+I K ID +G+G +D NEF Y
Sbjct: 5 LFKEIDVNGDGAVSYEEVK-AFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 69 TIMXXXXXXXX--MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVD 126
+I +K + + D +GDG +T EE+ S G +E + K D
Sbjct: 64 SIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG------IEKVAEQVMKAD 117
Query: 127 VDGDGMVNYNEF 138
+GDG + EF
Sbjct: 118 ANGDGYITLEEF 129
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
L+ ++++ D +GDGK+T++E++ K GI ++ + + K D NGDGY+ + EF
Sbjct: 77 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANGDGYITLEEF 129
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 118 CKLMIKKVDVDGDGMVNYNEFKQMM 142
+ + K++DV+GDG V+Y E K +
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFV 26
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 84/155 (54%), Gaps = 23/155 (14%)
Query: 6 ELRRVFQMFDRNGDGKITRKEL--------------SDSL-KNLGIYIPDNELVQMIEKI 50
+L +F+ D N DG + R EL S+SL +N G I D ++ ++ +
Sbjct: 332 QLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIED-QIDSLMPLL 390
Query: 51 DVNGDGYVDINEF--GSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLG 108
D++G G ++ +EF ++ +TI+ M+ AF +FD++G G I+ +EL + +
Sbjct: 391 DMDGSGSIEYSEFIASAIDRTILLSRER---MERAFKMFDKDGSGKISTKELFKLFSQAD 447
Query: 109 LKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMMK 143
+E+ + +I++VD + DG V++NEF +M++
Sbjct: 448 --SSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQ 480
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Query: 6 ELRRVFQMFD--RNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
+L+ VF++FD DG + +L D + LGI P NE V + G+ + EF
Sbjct: 7 DLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGIN-PRNEDVFAVGGTHKMGEKSLPFEEF 65
Query: 64 GSLYQTIMXXXX-XXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMI 122
Y+ +M EAF FD+ G G+I+ ELR VL +LG + + ED +I
Sbjct: 66 LPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGER--LSDEDVDEII 123
Query: 123 KKVDV--DGDGMVNYNEF-KQMMKG 144
K D+ D +G V Y +F K++M G
Sbjct: 124 KLTDLQEDLEGNVKYEDFVKKVMAG 148
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Query: 6 ELRRVFQMFD--RNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
+L+ VF++FD DG + +L D + LGI P NE V + G+ + EF
Sbjct: 10 DLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGIN-PRNEDVFAVGGTHKMGEKSLPFEEF 68
Query: 64 GSLYQTIMXXXX-XXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMI 122
Y+ +M EAF FD+ G G+I+ ELR VL +LG + + ED +I
Sbjct: 69 LPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGER--LSDEDVDEII 126
Query: 123 KKVDV--DGDGMVNYNEF-KQMMKG 144
K D+ D +G V Y +F K++M G
Sbjct: 127 KLTDLQEDLEGNVKYEDFVKKVMAG 151
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Query: 6 ELRRVFQMFD--RNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
+L+ VF++FD DG + +L D + LGI P NE V + G+ + EF
Sbjct: 7 DLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGIN-PRNEDVFAVGGTHKMGEKSLPFEEF 65
Query: 64 GSLYQTIMXXXX-XXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMI 122
Y+ +M EAF FD+ G G+I+ ELR VL +LG + + ED +I
Sbjct: 66 LPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGER--LSDEDVDEII 123
Query: 123 KKVDV--DGDGMVNYNEF-KQMMKG 144
K D+ D +G V Y +F K++M G
Sbjct: 124 KLTDLQEDLEGNVKYEDFVKKVMAG 148
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Query: 6 ELRRVFQMFD--RNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
+L+ VF++FD DG + +L D + LGI P NE V + G+ + EF
Sbjct: 8 DLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGIN-PRNEDVFAVGGTHKMGEKSLPFEEF 66
Query: 64 GSLYQTIMXXXX-XXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMI 122
Y+ +M EAF FD+ G G+I+ ELR VL +LG + + ED +I
Sbjct: 67 LPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGER--LSDEDVDEII 124
Query: 123 KKVDV--DGDGMVNYNEF-KQMMKG 144
K D+ D +G V Y +F K++M G
Sbjct: 125 KLTDLQEDLEGNVKYEDFVKKVMAG 149
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Query: 6 ELRRVFQMFD--RNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
+L+ VF++FD DG + +L D + LGI P NE V + G+ + EF
Sbjct: 10 DLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGIN-PRNEDVFAVGGTHKMGEKSLPFEEF 68
Query: 64 GSLYQTIMXXXX-XXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMI 122
Y+ +M EAF FD+ G G+I+ ELR VL +LG + + ED +I
Sbjct: 69 LPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGER--LSDEDVDEII 126
Query: 123 KKVDV--DGDGMVNYNEF-KQMMKG 144
K D+ D +G V Y +F K++M G
Sbjct: 127 KLTDLQEDLEGNVKYEDFVKKVMAG 151
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
EL+ F M D++ DG I ++L D +LG PD+EL M+++ G ++ F +
Sbjct: 17 ELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQLNFTAFLT 72
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLG 108
L+ + ++ AF++FD++G G+I + L+ +L ++G
Sbjct: 73 LFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMG 115
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Query: 6 ELRRVFQMFD--RNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
+L+ VF++FD DG + +L D + LGI P NE V + G+ + EF
Sbjct: 10 DLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGIN-PRNEDVFAVGGTHKMGEKSLPFEEF 68
Query: 64 GSLYQTIMXXXX-XXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMI 122
Y+ +M EAF FD+ G G+I+ ELR VL+ LG + D + +
Sbjct: 69 LPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINL 128
Query: 123 KKVDVDGDGMVNYNEF-KQMMKG 144
+ D +G V Y EF K++M G
Sbjct: 129 TDLQEDLEGNVKYEEFVKKVMAG 151
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Query: 6 ELRRVFQMFD--RNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
+L+ VF++FD DG + ++ D + LGI P NE V + G+ + EF
Sbjct: 10 DLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGIN-PRNEDVFAVGGTHKMGEKSLPFEEF 68
Query: 64 GSLYQTIMXXXX-XXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMI 122
Y+ +M EAF FD+ G G+I+ ELR VL+ LG + D + +
Sbjct: 69 LPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINL 128
Query: 123 KKVDVDGDGMVNYNEF-KQMMKG 144
+ D +G V Y EF K++M G
Sbjct: 129 TDLQEDLEGNVKYEEFVKKVMTG 151
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Query: 6 ELRRVFQMFD--RNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
+L+ VF++FD DG + ++ D + LGI P NE V + G+ + EF
Sbjct: 11 DLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGIN-PRNEDVFAVGGTHKMGEKSLPFEEF 69
Query: 64 GSLYQTIMXXXX-XXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMI 122
Y+ +M EAF FD+ G G+I+ ELR VL+ LG + D + +
Sbjct: 70 LPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINL 129
Query: 123 KKVDVDGDGMVNYNEF-KQMMKG 144
+ D +G V Y EF K++M G
Sbjct: 130 TDLQEDLEGNVKYEEFVKKVMTG 152
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 2/138 (1%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E+R F +FD +G G I KEL + + LG E+ + I +ID G G + +F +
Sbjct: 32 EIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNFGDFLT 91
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
+ + +AF +FD + G I+ + L+ V LG + T E+ + I +
Sbjct: 92 VXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG--ENLTDEELQEXIDEA 149
Query: 126 DVDGDGMVNYNEFKQMMK 143
D DGDG V+ EF ++ K
Sbjct: 150 DRDGDGEVSEQEFLRIXK 167
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E + FQ+ D++ DG I++ ++ + +LG + EL M+ G ++ F +
Sbjct: 58 EFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMV----AEAPGPINFTMFLT 113
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
++ + + AFN+FD+ GDG E L+ L + G K + ++ + +
Sbjct: 114 IFGDRIAGTDEEDVIVNAFNLFDE-GDGKCKEETLKRSLTTWGEK--FSQDEVDQALSEA 170
Query: 126 DVDGDGMVNYNEFKQMMKGGG 146
+DG+G+++ +F Q++ G
Sbjct: 171 PIDGNGLIDIKKFAQILTKGA 191
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 9/145 (6%)
Query: 6 ELRRVFQMFD--RNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
+L+ VF++F DG + +L D + LGI P NE V + G+ + EF
Sbjct: 10 DLKDVFELFAFWDGRDGAVDAFKLGDVCRCLGIN-PRNEDVFAVGGTHKMGEKSLPFEEF 68
Query: 64 GSLYQTIMXXXX-XXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMI 122
Y+ +M EAF FD+ G G+I+ ELR VL +LG + + ED +I
Sbjct: 69 LPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGER--LSDEDVDEII 126
Query: 123 KKVDV--DGDGMVNYNEF-KQMMKG 144
K D+ D +G V Y +F K++M G
Sbjct: 127 KLTDLQEDLEGNVKYEDFVKKVMAG 151
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
++EAF++FD +G G I +EL+ + +LG + + E+ K MI ++D DG G +++ EF
Sbjct: 32 IREAFDLFDTDGSGTIDAKELKVAMRALGFEPKK--EEIKKMISEIDKDGSGTIDFEEFL 89
Query: 140 QMM 142
MM
Sbjct: 90 TMM 92
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E+R F +FD +G G I KEL +++ LG E+ +MI +ID +G G +D EF +
Sbjct: 31 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLT 90
Query: 66 LYQTIM 71
+ M
Sbjct: 91 MMTAKM 96
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 9/136 (6%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
EL F+ D +G G I+ EL+ +L + G+ +++ D N G + +EF
Sbjct: 28 ELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKD 87
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
L+ I+ M+E F D +GDG + E+R+ L S G + + + +++K
Sbjct: 88 LHHFILS-------MREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSE--QTFQALMRKF 138
Query: 126 DVDGDGMVNYNEFKQM 141
D G + ++++ ++
Sbjct: 139 DRQRRGSLGFDDYVEL 154
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKN-LGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
ELR F+ FD NGDG+I+ EL ++++ LG + ++ ++I +D+NGDG VD EF
Sbjct: 8 ELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 66
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLAS-LGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEF 138
+++AF FD NGDG I+ ELR + LG + G D + +I+ VD++GDG V++ EF
Sbjct: 9 LRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHR--DIEEIIRDVDLNGDGRVDFEEF 66
Query: 139 KQMM 142
+MM
Sbjct: 67 VRMM 70
Score = 29.6 bits (65), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 25/59 (42%)
Query: 42 ELVQMIEKIDVNGDGYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEEL 100
EL + D NGDG + +E + ++ ++E D NGDG + EE
Sbjct: 8 ELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 66
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 10/132 (7%)
Query: 10 VFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEK-IDVNGDGYVDINEFGSLYQ 68
+F+ D NGDG ++ +E+ + + I + +L+Q+I K ID++G+G +D+ EF
Sbjct: 5 LFKQLDANGDGSVSYEEVK-AFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAA 63
Query: 69 TIMXXXXXXXX--MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVD 126
+ +K + + D +GDG +T EE+ + G + + V+ I K D
Sbjct: 64 AVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYE--KVVD----QIMKAD 117
Query: 127 VDGDGMVNYNEF 138
+GDG + EF
Sbjct: 118 ANGDGYITLEEF 129
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
L+ ++++ D +GDGK+T++E++ K G ++V I K D NGDGY+ + EF
Sbjct: 77 LKILYKLMDADGDGKLTKEEVTTFFKKFGY----EKVVDQIMKADANGDGYITLEEF 129
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 9/66 (13%)
Query: 80 MKEA-FNVFDQNGDGYITVEELRSVLASLGLKQGRTVED---CKLMIKKVDVDGDGMVNY 135
M EA F D NGDG ++ EE+++ ++S R +++ +L+ K +D+DG+G ++
Sbjct: 1 MAEALFKQLDANGDGSVSYEEVKAFVSS-----KRPIKNEQLLQLIFKAIDIDGNGEIDL 55
Query: 136 NEFKQM 141
EF +
Sbjct: 56 AEFTKF 61
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 10/143 (6%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMI---EKIDVNGDGYVDINE 62
+ + F +FDR GD KIT ++ D + LG + E+ +++ K ++N + E
Sbjct: 7 DFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEE 65
Query: 63 FGSLYQTIMXXXXXXX--XMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKL 120
F + Q E VFD+ G+G + ELR VLA+LG K T E+ +
Sbjct: 66 FLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKM--TEEEVEE 123
Query: 121 MIKKVDVDGDGMVNYNEF-KQMM 142
++K + D +G +NY F K +M
Sbjct: 124 LMKGQE-DSNGCINYEAFVKHIM 145
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 10/143 (6%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMI---EKIDVNGDGYVDINE 62
+ + F +FDR GD KIT ++ D + LG + E+ +++ K ++N + E
Sbjct: 9 DFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEE 67
Query: 63 FGSLYQTIMXXXXXXXX--MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKL 120
F + Q E VFD+ G+G + ELR VLA+LG K T E+ +
Sbjct: 68 FLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKM--TEEEVEE 125
Query: 121 MIKKVDVDGDGMVNYNEF-KQMM 142
++K + D +G +NY F K +M
Sbjct: 126 LMKGQE-DSNGCINYEAFVKHIM 147
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
+KEAF V D+ G I V+ LR +L SLG T ++ + MI + D DG G V+Y EFK
Sbjct: 9 LKEAFRVLDKEKKGVIKVDVLRWILKSLG--DELTEDEIENMIAETDTDGSGTVDYEEFK 66
Query: 140 QMM 142
+M
Sbjct: 67 CLM 69
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
EL+ F++ D+ G I L LK+LG + ++E+ MI + D +G G VD EF
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKC 67
Query: 66 L 66
L
Sbjct: 68 L 68
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
+ + F +FD+N DGYI +EEL+ +L + G + T +D + ++K D + DG ++Y+EF
Sbjct: 7 LSDLFRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDYDEFL 64
Query: 140 QMMKG 144
+ MKG
Sbjct: 65 EFMKG 69
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
EL +F+MFD+N DG I +EL L+ G I ++++ ++++ D N DG +D +EF
Sbjct: 6 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 63
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
+ + F +FD+N DGYI +EEL+ +L + G + T +D + ++K D + DG ++Y+EF
Sbjct: 12 LSDLFRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDYDEFL 69
Query: 140 QMMKG 144
+ MKG
Sbjct: 70 EFMKG 74
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
EL +F+MFD+N DG I +EL L+ G I ++++ ++++ D N DG +D +EF
Sbjct: 11 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 68
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
+ + F +FD+N DGYI +EEL+ +L + G + T +D + ++K D + DG ++Y+EF
Sbjct: 9 LSDLFRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDYDEFL 66
Query: 140 QMMKG 144
+ MKG
Sbjct: 67 EFMKG 71
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
EL +F+MFD+N DG I +EL L+ G I ++++ ++++ D N DG +D +EF
Sbjct: 8 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 65
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMI---EKIDVNGDGYVDINE 62
+ + F +FDR GD KIT ++ D ++ LG + E+ +++ K ++N + E
Sbjct: 5 DFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAK-KITFEE 63
Query: 63 FGSLYQTIMXXXX--XXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKL 120
F + Q E VFD+ G+G + ELR VLA+LG K T E+ +
Sbjct: 64 FLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKM--TEEEVEE 121
Query: 121 MIKKVDVDGDGMVNYNEF-KQMM 142
++K + D +G +NY F K +M
Sbjct: 122 LMKGQE-DSNGCINYEAFVKHIM 143
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
+ +RVF+ FD+N DGK++ E + Y ++V+ E+IDV+G+G ++ +EF
Sbjct: 1 SSAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFT 60
Query: 65 SLYQTIM 71
S + ++
Sbjct: 61 SCIEKML 67
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQ 140
K F FD+N DG ++++E R V +L T ED +++DVDG+G +N +EF
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREV--ALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTS 61
Query: 141 MMK 143
++
Sbjct: 62 CIE 64
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
+ + F +FD+N DGYI +EEL+ +L + G + T +D + ++K D + DG ++Y+EF
Sbjct: 17 LSDLFRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDYDEFL 74
Query: 140 QMMKG 144
+ MKG
Sbjct: 75 EFMKG 79
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
EL +F+MFD+N DG I +EL L+ G I ++++ ++++ D N DG +D +EF
Sbjct: 16 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 73
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E++ F M D+N DG I +L + +LG D EL M+++ G ++ F S
Sbjct: 24 EMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE----APGPLNFTMFLS 79
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
++ + ++ AF +FD+ + +E ++ +L ++G ++ ++ K+
Sbjct: 80 IFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMG--DNFNKDEMRMTFKEA 137
Query: 126 DVDGDGMVNYNEFKQMMKGGG 146
V+G G +Y F M+KG G
Sbjct: 138 PVEG-GKFDYVRFVAMIKGSG 157
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 16/80 (20%)
Query: 61 NEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKL 120
N F L Q +M MKEAF + DQN DG+I + +L+ + +SL GRT +D +L
Sbjct: 12 NVFARLPQKLMQE------MKEAFTMIDQNRDGFIDINDLKEMFSSL----GRTPDDKEL 61
Query: 121 --MIKKVDVDGDGMVNYNEF 138
M+K + G +N+ F
Sbjct: 62 TAMLK----EAPGPLNFTMF 77
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E++ F M D+N DG I +L + +LG D EL M+++ G ++ F S
Sbjct: 20 EMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE----APGPLNFTMFLS 75
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
++ + ++ AF +FD+ + +E ++ +L ++G ++ ++ K+
Sbjct: 76 IFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMG--DNFNKDEMRMTFKEA 133
Query: 126 DVDGDGMVNYNEFKQMMKGGG 146
V+G G +Y F M+KG G
Sbjct: 134 PVEG-GKFDYVRFVAMIKGSG 153
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E++ F M D+N DG I +L + +LG D EL M+++ G ++ F S
Sbjct: 24 EMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE----APGPLNFTMFLS 79
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
++ + ++ AF +FD+ + +E ++ +L ++G ++ ++ K+
Sbjct: 80 IFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMG--DNFNKDEMRMTFKEA 137
Query: 126 DVDGDGMVNYNEFKQMMKGGG 146
V+G G +Y F M+KG G
Sbjct: 138 PVEG-GKFDYVRFVAMIKGSG 157
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 16/80 (20%)
Query: 61 NEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKL 120
N F L Q +M MKEAF + DQN DG+I + +L+ + +SL GRT +D +L
Sbjct: 12 NVFARLPQKLMQE------MKEAFTMIDQNRDGFIDINDLKEMFSSL----GRTPDDKEL 61
Query: 121 --MIKKVDVDGDGMVNYNEF 138
M+K + G +N+ F
Sbjct: 62 TAMLK----EAPGPLNFTMF 77
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
+ + F +FD+N DGYI ++EL+ +L + G + T +D + ++K D + DG ++Y+EF
Sbjct: 8 LSDLFRMFDKNADGYIDLDELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDYDEFL 65
Query: 140 QMMKG 144
+ MKG
Sbjct: 66 EFMKG 70
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
EL +F+MFD+N DG I EL L+ G I ++++ ++++ D N DG +D +EF
Sbjct: 7 ELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 64
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 83 AFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMM 142
F +FD+N DG+I +EEL +L + G + ED + ++K D + DG ++++EF +MM
Sbjct: 15 CFRIFDKNADGFIDIEELGEILRATG--EHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMM 72
Query: 143 KG 144
+G
Sbjct: 73 EG 74
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%)
Query: 4 DTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
+ EL F++FD+N DG I +EL + L+ G ++ + ++ +++ D N DG +D +EF
Sbjct: 9 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEF 68
Query: 64 GSLYQTI 70
+ + +
Sbjct: 69 LKMMEGV 75
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E++ F M D+N DG I +L + +LG D EL M+++ G ++ F S
Sbjct: 3 EMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKE----APGPLNFTMFLS 58
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
++ + ++ AF +FD++ + +E ++ +L ++G + ++ ++ K+
Sbjct: 59 IFSDKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNK--DEMRMTFKEA 116
Query: 126 DVDGDGMVNYNEFKQMMK 143
V+G G +Y F M+K
Sbjct: 117 PVEG-GKFDYVRFVAMIK 133
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E++ F M D + DG ++++++ + LG D EL M+++ G ++ F S
Sbjct: 19 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLS 74
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
++ + ++ AF +FD+ + +E ++ +L ++G ++ ++ K+
Sbjct: 75 IFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMG--DNFNKDEMRMTFKEA 132
Query: 126 DVDGDGMVNYNEFKQMMKGGG 146
V+G G +Y +F M+KG G
Sbjct: 133 PVEG-GKFDYVKFTAMIKGSG 152
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQ 140
K AF++FD +G G I+ +EL +V+ LG Q T E+ +I++VD DG G +++ EF
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLG--QNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 141 MM 142
MM
Sbjct: 81 MM 82
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 3 MDTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINE 62
M E + F MFD +G G I+ KEL ++ LG EL +IE++D +G G +D E
Sbjct: 18 MIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEE 77
Query: 63 F 63
F
Sbjct: 78 F 78
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQ 140
K AF++FD +G G I+ +EL +V+ LG Q T E+ +I++VD DG G +++ EF
Sbjct: 12 KAAFDMFDADGGGDISTKELGTVMRMLG--QNPTKEELDAIIEEVDEDGSGTIDFEEFLV 69
Query: 141 MM 142
MM
Sbjct: 70 MM 71
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 3 MDTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINE 62
M E + F MFD +G G I+ KEL ++ LG EL +IE++D +G G +D E
Sbjct: 7 MIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEE 66
Query: 63 F 63
F
Sbjct: 67 F 67
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E++ F M D + DG ++++++ + LG D EL M+++ G ++ F S
Sbjct: 8 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLS 63
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
++ + ++ AF +FD+ + +E ++ +L ++G ++ ++ K+
Sbjct: 64 IFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMG--DNFNKDEMRMTFKEA 121
Query: 126 DVDGDGMVNYNEFKQMMKGGG 146
V+G G +Y +F M+KG G
Sbjct: 122 PVEG-GKFDYVKFTAMIKGSG 141
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEF 138
++EAF++FD +G G I V+EL+ + +LG + + E+ K MI ++D +G G +N+ +F
Sbjct: 33 IREAFDLFDADGTGTIDVKELKVAMRALGFEPKK--EEIKKMISEIDKEGTGKMNFGDF 89
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E+R F +FD +G G I KEL +++ LG E+ +MI +ID G G ++ +F
Sbjct: 32 EIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDF 89
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQ 140
KEAF +FD++ +G I+ EL +V+ SLGL + ++ ++DVDG+ + ++EF
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEA--EVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 141 MMK 143
+M
Sbjct: 71 LMS 73
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 40/62 (64%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
E + F +FD++ +G I+ EL+ +++LG+ + E+ ++ +IDV+G+ ++ +EF
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL 69
Query: 65 SL 66
+L
Sbjct: 70 AL 71
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 18/149 (12%)
Query: 6 ELRRV---FQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQ-MIEKIDVNGDGYVDIN 61
E++R+ F+ D + G ++ +E SL L N LVQ +I+ D +G+G VD
Sbjct: 19 EIKRLGKRFKKLDLDNSGSLSVEEFM-SLPEL----QQNPLVQRVIDIFDTDGNGEVDFK 73
Query: 62 EFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLM 121
EF ++ AF ++D + DGYI+ EL VL + G ++D +L
Sbjct: 74 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMM---VGNNLKDTQLQ 130
Query: 122 ------IKKVDVDGDGMVNYNEFKQMMKG 144
I D DGDG +++ EF ++ G
Sbjct: 131 QIVDKTIINADKDGDGRISFEEFCAVVGG 159
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 18/149 (12%)
Query: 6 ELRRV---FQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQ-MIEKIDVNGDGYVDIN 61
E++R+ F+ D + G ++ +E SL L N LVQ +I+ D +G+G VD
Sbjct: 18 EIKRLGKRFKKLDLDNSGSLSVEEFM-SLPEL----QQNPLVQRVIDIFDTDGNGEVDFK 72
Query: 62 EFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLM 121
EF ++ AF ++D + DGYI+ EL VL + G ++D +L
Sbjct: 73 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMM---VGNNLKDTQLQ 129
Query: 122 ------IKKVDVDGDGMVNYNEFKQMMKG 144
I D DGDG +++ EF ++ G
Sbjct: 130 QIVDKTIINADKDGDGRISFEEFCAVVGG 158
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 6 ELRRV---FQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQ-MIEKIDVNGDGYVDIN 61
E++R+ F+ D + G ++ +E SL L N LVQ +I+ D +G+G VD
Sbjct: 5 EIKRLGKRFKKLDLDNSGSLSVEEFM-SLPEL----QQNPLVQRVIDIFDTDGNGEVDFK 59
Query: 62 EFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASL---GLKQGRTVEDC 118
EF ++ AF ++D + DGYI+ EL VL + LK + +
Sbjct: 60 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 119
Query: 119 KLMIKKVDVDGDGMVNYNEFKQMMKG 144
I D DGDG +++ EF ++ G
Sbjct: 120 DKTIINADKDGDGRISFEEFCAVVGG 145
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 18/149 (12%)
Query: 6 ELRRV---FQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQ-MIEKIDVNGDGYVDIN 61
E++R+ F+ D + G ++ +E SL L N LVQ +I+ D +G+G VD
Sbjct: 4 EIKRLGKRFKKLDLDNSGSLSVEEFM-SLPEL----QQNPLVQRVIDIFDTDGNGEVDFK 58
Query: 62 EFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLM 121
EF ++ AF ++D + DGYI+ EL VL + G ++D +L
Sbjct: 59 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMM---VGNNLKDTQLQ 115
Query: 122 ------IKKVDVDGDGMVNYNEFKQMMKG 144
I D DGDG +++ EF ++ G
Sbjct: 116 QIVDKTIINADKDGDGRISFEEFCAVVGG 144
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 81 KEAFNVFDQNG-DGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
K AF++F Q+ DG I+ +EL V+ LG Q T E+ + MI +VD DG G V+++EF
Sbjct: 21 KAAFDIFIQDAEDGCISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 140 QMM 142
MM
Sbjct: 79 VMM 81
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 6 ELRRVFQMFDRNG-DGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E + F +F ++ DG I+ KEL ++ LG EL +MI+++D +G G VD +EF
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 81 KEAFNVFDQNG-DGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
K AF++F Q+ DG I+ +EL V+ LG Q T E+ + MI +VD DG G V+++EF
Sbjct: 21 KAAFDIFIQDAEDGCISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 140 QMM 142
MM
Sbjct: 79 VMM 81
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 6 ELRRVFQMFDRNG-DGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E + F +F ++ DG I+ KEL ++ LG EL +MI+++D +G G VD +EF
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E++ F M D + DG ++++++ + LG D EL M+++ G ++ F S
Sbjct: 7 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLS 62
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
++ + ++ AF +FD+ + +E ++ +L ++G ++ ++ K+
Sbjct: 63 IFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMG--DNFNKDEMRMTFKEA 120
Query: 126 DVDGDGMVNYNEFKQMMKGG 145
V+G G +Y +F M+KG
Sbjct: 121 PVEG-GKFDYVKFTAMIKGS 139
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQ 140
K AF++FD +G G I+ + L +V+ LG Q T E+ +I++VD DG G +++ EF
Sbjct: 23 KAAFDMFDADGGGDISTKALGTVMRMLG--QNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 141 MM 142
MM
Sbjct: 81 MM 82
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 3 MDTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINE 62
M E + F MFD +G G I+ K L ++ LG EL +IE++D +G G +D E
Sbjct: 18 MIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEE 77
Query: 63 F 63
F
Sbjct: 78 F 78
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 69/139 (49%), Gaps = 7/139 (5%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E++ F M D + DG ++++++ + LG D EL M+++ G ++ F S
Sbjct: 8 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLS 63
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
++ + ++ AF +FD+ + +E ++ +L ++G ++ ++ K+
Sbjct: 64 IFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMG--DNFNKDEMRMTFKEA 121
Query: 126 DVDGDGMVNYNEFKQMMKG 144
V+G G +Y +F M+KG
Sbjct: 122 PVEG-GKFDYVKFTAMIKG 139
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 69/139 (49%), Gaps = 7/139 (5%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
E++ F M D + DG ++++++ + LG D EL M+++ G ++ F S
Sbjct: 5 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLS 60
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKV 125
++ + ++ AF +FD+ + +E ++ +L ++G ++ ++ K+
Sbjct: 61 IFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMG--DNFNKDEMRMTFKEA 118
Query: 126 DVDGDGMVNYNEFKQMMKG 144
V+G G +Y +F M+KG
Sbjct: 119 PVEG-GKFDYVKFTAMIKG 136
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
L+ ++++ D +GDGK+T++E++ K GI ++ + + K D NGDGY+ + EF
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANGDGYITLEEF 59
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEF 138
+K + + D +GDG +T EE+ S G +E + K D +GDG + EF
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFFKKHG------IEKVAEQVMKADANGDGYITLEEF 59
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 50 IDVNGDGYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEEL 100
+DV+GDG + E S ++ MK D NGDGYIT+EE
Sbjct: 14 MDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKA-----DANGDGYITLEEF 59
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E+ + F++FD + GKI+ K L K LG + D EL +MI++ D +GDG V EF
Sbjct: 12 EILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEF 69
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 83 AFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMM 142
AF +FD + G I+ + L+ V LG + T E+ + MI + D DGDG V+ EF ++M
Sbjct: 16 AFKLFDDDETGKISFKNLKRVAKELG--ENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 73
Query: 143 K 143
K
Sbjct: 74 K 74
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 40/61 (65%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGS 65
ELR F+ FD++ DG I ++L + ++ +G + EL+++ ++I++N G+VD ++F
Sbjct: 11 ELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVE 70
Query: 66 L 66
L
Sbjct: 71 L 71
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
++EAF FD++ DGYI +L + + ++G T + + ++++++ G V++++F
Sbjct: 12 LREAFREFDKDKDGYINCRDLGNCMRTMGYMP--TEMELIELSQQINMNLGGHVDFDDFV 69
Query: 140 QMM 142
++M
Sbjct: 70 ELM 72
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 81 KEAFNVFDQNG-DGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
K AF++F Q DG I+ +EL V+ LG Q T E+ + MI +VD DG G V+++EF
Sbjct: 21 KAAFDIFVQGAEDGCISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 140 QMM 142
MM
Sbjct: 79 VMM 81
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 6 ELRRVFQMFDRNG-DGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E + F +F + DG I+ KEL ++ LG EL +MI+++D +G G VD +EF
Sbjct: 19 EFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E+ + F++FD + GKI+ K L K LG + D EL +MI++ D +GDG V EF
Sbjct: 22 EILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEF 79
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 67 YQTIMXXXXXXXXMKE----AFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMI 122
+ T+M KE AF +FD + G I+ + L+ V LG + T E+ + MI
Sbjct: 6 FLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG--ENLTDEELQEMI 63
Query: 123 KKVDVDGDGMVNYNEFKQMMK 143
+ D DGDG V+ EF ++MK
Sbjct: 64 DEADRDGDGEVSEQEFLRIMK 84
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 2 IMDTELRRVFQMFDRNGDGKITRKELSDSLKNLGIY 37
+ D EL+ + DR+GDG+++ +E +K +Y
Sbjct: 54 LTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY 89
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 3 MDTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINE 62
M E + F MFD +G G I+ KEL ++ LG EL +I ++D +G G +D E
Sbjct: 18 MIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEE 77
Query: 63 F 63
F
Sbjct: 78 F 78
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQ 140
K AF++FD +G G I+ +EL +V+ LG Q T + +I +VD DG G +++ EF
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLG--QNPTKCELDAIICEVDEDGSGTIDFEEFLV 80
Query: 141 MM 142
MM
Sbjct: 81 MM 82
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 11/150 (7%)
Query: 6 ELRRVFQMFD--RNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E+R VF +FD DG + ++ D L+ LG+ P V G+ + E
Sbjct: 10 EVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMN-PTEAQVHQHGGTKKMGEKAYKLEEI 68
Query: 64 GSLYQTIMXXXX--XXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVED-CKL 120
+Y+ + EAF FD+ G G I+ E+R+VL LG R ED C
Sbjct: 69 LPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLG---ERITEDQCND 125
Query: 121 MIKKVDV--DGDGMVNYNEFKQMMKGGGFA 148
+ D+ D DG + Y + + + G F
Sbjct: 126 IFTFCDIREDIDGNIKYEDLMKKVMAGPFP 155
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 12/143 (8%)
Query: 5 TELRRVFQMF-DRNGDGKITRKELSD--SLKNLGIYIPDNELV-QMIEKIDVNGDGYVDI 60
TE + ++ F G++T E LKNL N+ V QM E D N DGY+D
Sbjct: 14 TECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSP--SANKYVEQMFETFDFNKDGYIDF 71
Query: 61 NEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASL----GLKQGRTVE 116
E+ + ++ ++ F ++D +G+G I EL +++ ++ + T E
Sbjct: 72 MEYVAALSLVL-KGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAE 130
Query: 117 DCKLMI-KKVDVDGDGMVNYNEF 138
+ M+ K+D++GDG ++ EF
Sbjct: 131 EFTNMVFDKIDINGDGELSLEEF 153
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 3 MDTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQ-------MIEKIDVNGD 55
+D +LR F+++D +G+G I R EL + +K + NE + + +KID+NGD
Sbjct: 86 VDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGD 145
Query: 56 GYVDINEF 63
G + + EF
Sbjct: 146 GELSLEEF 153
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 56 GYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTV 115
G + + EF + +++ F FD N DGYI E + L SL LK G+
Sbjct: 30 GQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAAL-SLVLK-GKVD 87
Query: 116 EDCKLMIKKVDVDGDGMVNYNEFKQMMKG 144
+ + K DVDG+G ++ E ++K
Sbjct: 88 QKLRWYFKLYDVDGNGCIDRGELLNIIKA 116
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 46 MIEKIDVNGDGYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLA 105
+ D +G+G + +F + +I+ +K AFN++D N DG IT EE+ +++
Sbjct: 134 LFNAFDADGNGAIHFEDF-VVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMK 192
Query: 106 SLG----------LKQGRTVEDCKLMIKKVDVDGDGMVNYNEF 138
S+ L++ +E + +K+D + DG+V +EF
Sbjct: 193 SIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEF 235
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 12/70 (17%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKN----LGIYI--------PDNELVQMIEKIDVN 53
+L+ F ++D N DG IT++E+ +K+ +G + P + + +K+D N
Sbjct: 166 KLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRN 225
Query: 54 GDGYVDINEF 63
DG V I+EF
Sbjct: 226 QDGVVTIDEF 235
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 2/89 (2%)
Query: 56 GYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTV 115
G VD + F +Y FN FD +G+G I E+ V+ L +G
Sbjct: 107 GLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDF--VVGLSILLRGTVH 164
Query: 116 EDCKLMIKKVDVDGDGMVNYNEFKQMMKG 144
E K D++ DG + E +MK
Sbjct: 165 EKLKWAFNLYDINKDGCITKEEMLAIMKS 193
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 18/122 (14%)
Query: 9 RVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF----- 63
+F +FD++ +G I +E L + +L E D+N DGY+ +E
Sbjct: 67 HLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVA 126
Query: 64 ------GSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELR-------SVLASLGLK 110
GS+ +K+ F + D+N DGYIT++E R S++ +L L
Sbjct: 127 SVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSIIGALNLY 186
Query: 111 QG 112
G
Sbjct: 187 DG 188
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 20 GKITRKELSDSLKNLGIY-IPDNELVQMIEKIDVNGDGYVDINEFGSLYQTIMXXXXXXX 78
G++ R++ K + P++ + D + +G++ EF ++ T
Sbjct: 41 GQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTT-SRGTLEE 99
Query: 79 XMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTV---ED-------CKLMIKKVDVD 128
+ AF ++D N DGYIT +E+ +++AS+ G V ED K + K +D +
Sbjct: 100 KLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKN 159
Query: 129 GDGMVNYNEFKQ 140
DG + +EF++
Sbjct: 160 EDGYITLDEFRE 171
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 10/69 (14%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLG----------LKQGRTVEDCKLMIKKVDVDG 129
+K AFN++D N DGYIT EE+ +++ S+ L++ E + +K+D +
Sbjct: 11 LKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDRNQ 70
Query: 130 DGMVNYNEF 138
DG+V EF
Sbjct: 71 DGVVTIEEF 79
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 12/69 (17%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNL------GIY------IPDNELVQMIEKIDVNG 54
L+ F ++D N DG IT++E+ +K++ Y P + + EK+D N
Sbjct: 11 LKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDRNQ 70
Query: 55 DGYVDINEF 63
DG V I EF
Sbjct: 71 DGVVTIEEF 79
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 81 KEAFNVFDQNG-DGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
K AF++F DG I+ +EL V+ LG Q T E+ + MI +VD DG G V+++EF
Sbjct: 21 KAAFDIFVLGAEDGSISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 140 QMM 142
MM
Sbjct: 79 VMM 81
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 6 ELRRVFQMFDRNG-DGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E + F +F DG I+ KEL ++ LG EL +MI+++D +G G VD +EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 83 AFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMM 142
AF VFD NGDG I +E + ++ +G ++ T + + +K+ D DG+G+++ EF ++
Sbjct: 13 AFKVFDANGDGVIDFDEFKFIMQKVG-EEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLI 71
Query: 143 K 143
K
Sbjct: 72 K 72
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 4 DTELRRVFQMFDRNGDGKITRKELSDSLKNLG-IYIPDNELVQMIEKIDVNGDGYVDINE 62
+ E+ R F++FD NGDG I E ++ +G + D E+ + +++ D +G+G +DI E
Sbjct: 7 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPE 66
Query: 63 FGSLYQ 68
F L +
Sbjct: 67 FMDLIK 72
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 34/65 (52%)
Query: 40 DNELVQMIEKIDVNGDGYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEE 99
+ E+++ + D NGDG +D +EF + Q + ++EA D++G+G I + E
Sbjct: 7 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPE 66
Query: 100 LRSVL 104
++
Sbjct: 67 FMDLI 71
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 81 KEAFNVFDQNG-DGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
K AF++F DG I+ +EL V+ LG Q T E+ + MI +VD DG G V+++EF
Sbjct: 21 KAAFDIFVLGAEDGSISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 140 QMM 142
MM
Sbjct: 79 VMM 81
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 6 ELRRVFQMFDRNG-DGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E + F +F DG I+ KEL ++ LG EL +MI+++D +G G VD +EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 81 KEAFNVFDQNG-DGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
K AF++F DG I+ +EL V+ LG Q T E+ + MI +VD DG G V+++EF
Sbjct: 21 KAAFDIFVLGAEDGSISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 140 QMM 142
MM
Sbjct: 79 VMM 81
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 6 ELRRVFQMFDRNG-DGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E + F +F DG I+ KEL ++ LG EL +MI+++D +G G VD +EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDC--KLMIKKVDVDGDGMVNYNE 137
+K+ F D + G+I EEL+ VL S GR + D K +K D DGDG + +E
Sbjct: 44 VKKVFKAIDADASGFIEEEELKFVLKSFAA-DGRDLTDAETKAFLKAADKDGDGKIGIDE 102
Query: 138 FKQMM 142
F+ ++
Sbjct: 103 FETLV 107
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNL---GIYIPDNELVQMIEKIDVNGDGYVDINE 62
++++VF+ D + G I +EL LK+ G + D E ++ D +GDG + I+E
Sbjct: 43 DVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDE 102
Query: 63 FGSLYQ 68
F +L
Sbjct: 103 FETLVH 108
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 81 KEAFNVFDQNG-DGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
K AF++F DG I+ +EL V+ LG Q T E+ + MI +VD DG G V+++EF
Sbjct: 21 KAAFDIFVLGAEDGCISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 140 QMM 142
MM
Sbjct: 79 VMM 81
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 6 ELRRVFQMFDRNG-DGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E + F +F DG I+ KEL ++ LG EL +MI+++D +G G VD +EF
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 83 AFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMM 142
AF +FD + G IT+++LR V LG + T E+ + MI + D + D ++ +EF ++M
Sbjct: 14 AFRLFDDDNSGTITIKDLRRVAKELG--ENLTEEELQEMIAEADRNDDNEIDEDEFIRIM 71
Query: 143 K 143
K
Sbjct: 72 K 72
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E+ + F++FD + G IT K+L K LG + + EL +MI + D N D +D +EF
Sbjct: 10 EILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEF 67
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDC--KLMIKKVDVDGDGMVNYNE 137
+K+AF V DQ+ G+I +EL+ L + R + D K + D DGDGM+ +E
Sbjct: 43 VKKAFYVIDQDKSGFIEEDELKLFLQNFS-PSARALTDAETKAFLADGDKDGDGMIGVDE 101
Query: 138 FKQMMKG 144
F M+K
Sbjct: 102 FAAMIKA 108
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGI---YIPDNELVQMIEKIDVNGDGYVDINE 62
++++ F + D++ G I EL L+N + D E + D +GDG + ++E
Sbjct: 42 DVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDE 101
Query: 63 FGSLYQT 69
F ++ +
Sbjct: 102 FAAMIKA 108
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASL----GLKQGRTVEDCKLMIKKVDVDGDGMVNY 135
++ AF D NGDGY+T EL++ + +L L + + E +IK D + DG ++
Sbjct: 9 LEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISK 68
Query: 136 NEF 138
EF
Sbjct: 69 EEF 71
Score = 32.7 bits (73), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 42 ELVQMIEKIDVNGDGYVDINEFGSLYQTI-MXXXXXXXXMKEA----FNVFDQNGDGYIT 96
EL +K+D NGDGYV E + T+ +KEA + D+N DG I+
Sbjct: 8 ELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKIS 67
Query: 97 VEELRSVLASL 107
EE + A L
Sbjct: 68 KEEFLNANAEL 78
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Query: 5 TELRRVFQMFDRNGDGKITRKELS------DSLKNLGIYIPDNELVQMIEKIDVNGDGYV 58
EL F+ D NGDG +T EL D+ K L ++I+ D N DG +
Sbjct: 7 AELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKI 66
Query: 59 DINEF 63
EF
Sbjct: 67 SKEEF 71
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 81 KEAFNVFDQNG-DGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
K AF++F DG I+ +EL V+ LG Q T E+ + MI +VD DG G V+++E+
Sbjct: 21 KAAFDIFVLGAEDGCISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTVDFDEWL 78
Query: 140 QMM 142
MM
Sbjct: 79 VMM 81
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 6 ELRRVFQMFDRNG-DGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E + F +F DG I+ KEL ++ LG EL +MI+++D +G G VD +E+
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEW 77
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 81 KEAFNVFDQNG-DGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
K AF++F DG I+ +EL V+ LG Q T E+ + MI +VD DG G V+++E+
Sbjct: 21 KAAFDIFVLGAEDGCISTKELGKVMRMLG--QNPTPEELQEMIDEVDEDGSGTVDFDEWL 78
Query: 140 QMM 142
MM
Sbjct: 79 VMM 81
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 6 ELRRVFQMFDRNG-DGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E + F +F DG I+ KEL ++ LG EL +MI+++D +G G VD +E+
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEW 77
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 63 FGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGR--TVEDCKL 120
+ S + T+ +K+ F + DQ+ G+I EEL+ L + R T + K
Sbjct: 26 YKSFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFS-SSARVLTSAETKA 84
Query: 121 MIKKVDVDGDGMVNYNEFKQMMKG 144
+ D DGDG + EF+ ++K
Sbjct: 85 FLAAGDTDGDGKIGVEEFQSLVKA 108
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIY---IPDNELVQMIEKIDVNGDGYVDINE 62
++++VF + D++ G I +EL LKN + E + D +GDG + + E
Sbjct: 42 QIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEE 101
Query: 63 FGSLYQT 69
F SL +
Sbjct: 102 FQSLVKA 108
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 45 QMIEKIDVNGDGYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVL 104
Q+ D N DG+VD EF + IM +K F ++D +G+G I EL +
Sbjct: 61 QVYNTFDTNKDGFVDFLEFIAAVNLIM-QEKMEQKLKWYFKLYDADGNGSIDKNELLDMF 119
Query: 105 ASLGLKQGRTV----EDCKLMIKKVDVDGDGMVNYNEF 138
++ G+ E L+ K+D++ DG + EF
Sbjct: 120 MAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEF 157
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 3 MDTELRRVFQMFDRNGDGKITRKELSD------SLKNLGIYIPDNELVQMIEKIDVNGDG 56
M+ +L+ F+++D +G+G I + EL D +L P+ + + KID+N DG
Sbjct: 91 MEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDG 150
Query: 57 YVDINEF 63
+ + EF
Sbjct: 151 ELTLEEF 157
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 56 GYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGL-KQGRT 114
G ++EF +L + + +N FD N DG++ E +A++ L Q +
Sbjct: 35 GLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEF---IAAVNLIMQEKM 91
Query: 115 VEDCKLMIKKVDVDGDGMVNYNEFKQM 141
+ K K D DG+G ++ NE M
Sbjct: 92 EQKLKWYFKLYDADGNGSIDKNELLDM 118
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Query: 4 DTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
+ + +V+ FD N DG + E ++ + + +L + D +G+G +D NE
Sbjct: 56 NKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNEL 115
Query: 64 GSLYQTIMXXXXXXXXMKE-----AFNVFDQNGDGYITVEELRSVLA 105
++ + E F+ D N DG +T+EE + +A
Sbjct: 116 LDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMA 162
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 63 FGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGR--TVEDCKL 120
+ S + T+ +K+ F + DQ+ G+I EEL+ L + R T + K
Sbjct: 27 YKSFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFS-SSARVLTSAETKA 85
Query: 121 MIKKVDVDGDGMVNYNEFKQMMKG 144
+ D DGDG + EF+ ++K
Sbjct: 86 FLAAGDTDGDGKIGVEEFQSLVKA 109
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGI---YIPDNELVQMIEKIDVNGDGYVDINE 62
++++VF + D++ G I +EL LKN + E + D +GDG + + E
Sbjct: 43 QIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEE 102
Query: 63 FGSLYQT 69
F SL +
Sbjct: 103 FQSLVKA 109
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 21/121 (17%)
Query: 38 IPDNE-----LVQMIEKIDVNGDGYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGD 92
+PDNE + M D NGD +D E+ + ++ +K F ++D++ +
Sbjct: 51 VPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHK-LKWTFKIYDKDRN 109
Query: 93 GYITVEELRSVLASL-GLKQGRTVE-----DCKLMIKK---------VDVDGDGMVNYNE 137
G I +EL ++ S+ LK+ +VE KL+ + VD +GDG ++ NE
Sbjct: 110 GCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNE 169
Query: 138 F 138
F
Sbjct: 170 F 170
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 41/78 (52%), Gaps = 17/78 (21%)
Query: 3 MDTELRRVFQMFDRNGDGKITRKELSDSLKNL-----------------GIYIPDNELVQ 45
++ +L+ F+++D++ +G I R+EL D ++++ + P+ + +
Sbjct: 93 LEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDR 152
Query: 46 MIEKIDVNGDGYVDINEF 63
+ +D NGDG + +NEF
Sbjct: 153 IFLLVDENGDGQLSLNEF 170
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 80 MKEAFNVFD-QNGDG-YITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNE 137
+K AF VF + GD I+ EEL+ V+ +LG + + MI++VD +GDG V++ E
Sbjct: 7 IKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEE 66
Query: 138 FKQMMK 143
F MMK
Sbjct: 67 FLVMMK 72
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 6 ELRRVFQMFD-RNGDG-KITRKELSDSLKNLGIYIPD--NELVQMIEKIDVNGDGYVDIN 61
E++ F++F + GD +I+++EL ++ LG + + L +MIE++D NGDG V
Sbjct: 6 EIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFE 65
Query: 62 EF 63
EF
Sbjct: 66 EF 67
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 72/163 (44%), Gaps = 22/163 (13%)
Query: 1 IIMDTELRRVFQMFDRNGDGKITRKELSDSLKNL-------GIYIPDNELVQMIEKIDVN 53
+I ++ ++ FD +G G + KEL + ++ L G+ + E+ +++
Sbjct: 12 LITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSP-EMKTFVDQYGQR 70
Query: 54 GDGYVDINEFGSLYQT-----IMXXXXXXXXMKE---AFNVFDQNGDGYITVEELRSVLA 105
DG + I E + T ++ +E + +D + G+I EEL++ L
Sbjct: 71 DDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLK 130
Query: 106 SLGLKQGRTVEDCK------LMIKKVDVDGDGMVNYNEFKQMM 142
L K +TV+D K LM+K D + DG + E +++
Sbjct: 131 DLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLL 173
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 15/126 (11%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNL----GIYIPDNELVQ----MIEKIDVNGDGY 57
E + ++ +D + G I +EL + LK+L + D +L + M++ D N DG
Sbjct: 104 EFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGK 163
Query: 58 VDINEFGSLYQTIMXXXXXXXXMK-------EAFNVFDQNGDGYITVEELRSVLASLGLK 110
+++ E L +K +AF ++DQ+G+GYI EL ++L L K
Sbjct: 164 LELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEK 223
Query: 111 QGRTVE 116
+ ++
Sbjct: 224 NKQELD 229
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVED--CKLMIKKVDVDGDGMVNYNE 137
+KE F + D++ G+I EEL+ VL GR + D K ++ D D DG + +E
Sbjct: 43 VKEVFEILDKDQSGFIEEEELKGVLKGFSA-HGRDLNDTETKALLAAGDSDHDGKIGADE 101
Query: 138 FKQMM 142
F +M+
Sbjct: 102 FAKMV 106
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 59/148 (39%), Gaps = 25/148 (16%)
Query: 11 FQMFDRNGDGKITRKELSDSLKNL--------------GIYIPDNELVQMIEKI-DVNGD 55
F FD++G+G I R + S + K L +Y L Q + I D +GD
Sbjct: 10 FTTFDQDGNGHIDRSDFSGAAKALLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGD 69
Query: 56 GYVDINEF--GSLYQ----TIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGL 109
+ EF G++ + + A V D +GDG +TV + L + G+
Sbjct: 70 QRITREEFVTGAVKRLRDKPDRFAEIARPFLHAALGVADTDGDGAVTVADTARALTAFGV 129
Query: 110 KQGRTVEDCKLMIKKVDVDGDGMVNYNE 137
+ + + +D DGDG V E
Sbjct: 130 PE----DLARQAAAALDTDGDGKVGETE 153
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 18/149 (12%)
Query: 4 DTELRRV--FQMFDRNGDGKITRKELSD------SLKNLGIYIPDNELVQ-MIEKID--- 51
+++ RR+ F+ FD NG GK+ +E+ D L ++PD +VQ +K
Sbjct: 48 ESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPD--IVQRAFDKAKDLG 105
Query: 52 --VNGDGYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGL 109
V G G D+ EF ++ ++ + F+ D++G + ++E + L L
Sbjct: 106 NKVKGVGEEDLVEFLE-FRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLK- 163
Query: 110 KQGRTVEDCKLMIKKVDVDGDGMVNYNEF 138
+ G + D + ++D +G G+V ++EF
Sbjct: 164 EWGVDITDATTVFNEIDTNGSGVVTFDEF 192
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 92 DGYITVEELRSVLASLGLKQGR---TVEDCKLMIKKVDVDGDGMVNYNEFKQMM 142
DG I +EL+ L G+ G +E C+LM+ +D D G + +NEFK++
Sbjct: 46 DGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELW 99
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 19 DGKITRKELSDSLKNLGI---YIPDN-ELVQ-MIEKIDVNGDGYVDINEFGSLYQTIMXX 73
DG+I EL L GI Y P N E + M+ +D + G + NEF L+ +
Sbjct: 46 DGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL--- 102
Query: 74 XXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLK 110
++ F FD + G + +EL+ L ++G +
Sbjct: 103 ----NGWRQHFISFDTDRSGTVDPQELQKALTTMGFR 135
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 92 DGYITVEELRSVLASLGLKQGR---TVEDCKLMIKKVDVDGDGMVNYNEFKQMM 142
DG I +EL+ L G+ G +E C+LM+ +D D G + +NEFK++
Sbjct: 46 DGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELW 99
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
T+ + VF+ +DR+ G I + EL +L G + D +I K D G G + ++F
Sbjct: 92 TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF- 150
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITV--EELRSVLASL 107
+ + + F +D + DG+I V E+ S++ S+
Sbjct: 151 ------IQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSI 189
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 52/143 (36%), Gaps = 48/143 (33%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELV--QMIEKIDVNGDGYVDINEFG 64
L VFQ D++ G I+ EL +L N G + P N + +I D V+ +EF
Sbjct: 27 LWNVFQRVDKDRSGVISDTELQQALSN-GTWTPFNPVTVRSIISMFDRENKAGVNFSEFT 85
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
+++ YIT D + + +
Sbjct: 86 GVWK-------------------------YIT--------------------DWQNVFRT 100
Query: 125 VDVDGDGMVNYNEFKQMMKGGGF 147
D D GM++ NE KQ + G G+
Sbjct: 101 YDRDNSGMIDKNELKQALSGFGY 123
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
T+ + VF+ +DR+ G I + EL +L G + D +I K D G G + ++F
Sbjct: 70 TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF- 128
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITV--EELRSVLASL 107
+ + + F +D + DG+I V E+ S++ S+
Sbjct: 129 ------IQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSI 167
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 52/143 (36%), Gaps = 48/143 (33%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELV--QMIEKIDVNGDGYVDINEFG 64
L VFQ D++ G I+ EL +L N G + P N + +I D V+ +EF
Sbjct: 5 LWNVFQRVDKDRSGVISDTELQQALSN-GTWTPFNPVTVRSIISMFDRENKAGVNFSEFT 63
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
+++ YIT D + + +
Sbjct: 64 GVWK-------------------------YIT--------------------DWQNVFRT 78
Query: 125 VDVDGDGMVNYNEFKQMMKGGGF 147
D D GM++ NE KQ + G G+
Sbjct: 79 YDRDNSGMIDKNELKQALSGFGY 101
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 9/132 (6%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLG-IYIPDNELVQMIEKIDVNGDGYVDINEFG 64
+ + F + D+N DG I + +L ++ +G + + + EL MI++ G ++ F
Sbjct: 8 DFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKE----ASGPINFTVFL 63
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGR-TVEDCKLMIK 123
+++ + + AF V D +G G I L +L + G GR T E+ K M
Sbjct: 64 TMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGG---GRFTPEEIKNMWA 120
Query: 124 KVDVDGDGMVNY 135
D G V+Y
Sbjct: 121 AFPPDVAGNVDY 132
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
KEAF V DQN DG I ++LR A++G + E+ MIK + G +N+ F
Sbjct: 9 FKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKN-EELDAMIK----EASGPINFTVFL 63
Query: 140 QMM 142
M
Sbjct: 64 TMF 66
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
T+ + VF+ +DR+ G I + EL +L G + D +I K D G G + ++F
Sbjct: 74 TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF- 132
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITV--EELRSVLASL 107
+ + + F +D + DG+I V E+ S++ S+
Sbjct: 133 ------IQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSI 171
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 52/143 (36%), Gaps = 48/143 (33%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELV--QMIEKIDVNGDGYVDINEFG 64
L VFQ D++ G I+ EL +L N G + P N + +I D V+ +EF
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSN-GTWTPFNPVTVRSIISMFDRENKAGVNFSEFT 67
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
+++ YIT D + + +
Sbjct: 68 GVWK-------------------------YIT--------------------DWQNVFRT 82
Query: 125 VDVDGDGMVNYNEFKQMMKGGGF 147
D D GM++ NE KQ + G G+
Sbjct: 83 YDRDNSGMIDKNELKQALSGFGY 105
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
T+ + VF+ +DR+ G I + EL +L G + D +I K D G G + ++F
Sbjct: 71 TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF- 129
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITV--EELRSVLASL 107
+ + + F +D + DG+I V E+ S++ S+
Sbjct: 130 ------IQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSI 168
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 52/143 (36%), Gaps = 48/143 (33%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELV--QMIEKIDVNGDGYVDINEFG 64
L VFQ D++ G I+ EL +L N G + P N + +I D V+ +EF
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSN-GTWTPFNPVTVRSIISMFDRENKAGVNFSEFT 64
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
+++ YIT D + + +
Sbjct: 65 GVWK-------------------------YIT--------------------DWQNVFRT 79
Query: 125 VDVDGDGMVNYNEFKQMMKGGGF 147
D D GM++ NE KQ + G G+
Sbjct: 80 YDRDNSGMIDKNELKQALSGFGY 102
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 4 DTELRRVFQMFDRN-GDGKITRKELSDSLKNLGIYIPDNELVQMIEKI----DVNGDGYV 58
+ E++ ++ F R+ G ++ +E K G + P + + E + D NGDG +
Sbjct: 24 EHEIQEWYKGFLRDCPSGHLSMEEFK---KIYGNFFPYGDASKFAEHVFRTFDANGDGTI 80
Query: 59 DINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEEL--------RSVLASLGLK 110
D EF + ++ +K AF+++D +G+GYI+ E+ + V + + +
Sbjct: 81 DFREF-IIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMP 139
Query: 111 QGRTVEDCKL--MIKKVDVDGDGMVNYNEF 138
+ + + + + +++D + DG ++ EF
Sbjct: 140 EDESTPEKRTEKIFRQMDTNRDGKLSLEEF 169
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 56 GYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTV 115
G++ + EF +Y + F FD NGDG I E ++A +G+
Sbjct: 41 GHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREF--IIALSVTSRGKLE 98
Query: 116 EDCKLMIKKVDVDGDGMVNYNEFKQMMKG 144
+ K D+DG+G ++ E ++++
Sbjct: 99 QKLKWAFSMYDLDGNGYISKAEMLEIVQA 127
Score = 29.6 bits (65), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 16/75 (21%)
Query: 3 MDTELRRVFQMFDRNGDGKITRKELSDSLKNLGIY--------------IPDNELVQMIE 48
++ +L+ F M+D +G+G I++ E+ + ++ IY P+ ++
Sbjct: 97 LEQKLKWAFSMYDLDGNGYISKAEMLEIVQ--AIYKMVSSVMKMPEDESTPEKRTEKIFR 154
Query: 49 KIDVNGDGYVDINEF 63
++D N DG + + EF
Sbjct: 155 QMDTNRDGKLSLEEF 169
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
T+ + VF+ +DR+ G I + EL +L G + D +I K D G G + ++F
Sbjct: 93 TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF- 151
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITV--EELRSVLASL 107
+ + + F +D + DG+I V E+ S++ S+
Sbjct: 152 ------IQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSI 190
Score = 32.7 bits (73), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/111 (19%), Positives = 44/111 (39%), Gaps = 9/111 (8%)
Query: 38 IPDNE-LVQMIEKIDVNGDGYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYIT 96
+PD L + +++D + G + NE ++ ++FD+ +
Sbjct: 22 LPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVN 81
Query: 97 VEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMMKGGGF 147
E V + + D + + + D D GM++ NE KQ + G G+
Sbjct: 82 FSEFTGVW--------KYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGY 124
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 9/132 (6%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLG-IYIPDNELVQMIEKIDVNGDGYVDINEFG 64
+ + F + D+N DG I + +L ++ +G + + + EL MI++ G ++ F
Sbjct: 26 DFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKE----ASGPINFTVFL 81
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGR-TVEDCKLMIK 123
+++ + + AF V D +G G I L +L + G GR T E+ K M
Sbjct: 82 TMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGG---GRFTPEEIKNMWA 138
Query: 124 KVDVDGDGMVNY 135
D G V+Y
Sbjct: 139 AFPPDVAGNVDY 150
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
KEAF V DQN DG I ++LR A++G + E+ MIK + G +N+ F
Sbjct: 27 FKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKN-EELDAMIK----EASGPINFTVFL 81
Query: 140 QMM 142
M
Sbjct: 82 TMF 84
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 92 DGYITVEELRSVLASLGLKQGR---TVEDCKLMIKKVDVDGDGMVNYNEFKQMM 142
DG I +EL+ L G+ G +E C+LM+ +D D G + +NEFK++
Sbjct: 15 DGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELW 68
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 19 DGKITRKELSDSLKNLGI---YIPDN-ELVQ-MIEKIDVNGDGYVDINEFGSLYQTIMXX 73
DG+I EL L GI Y P N E + M+ +D + G + NEF L+ +
Sbjct: 15 DGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL--- 71
Query: 74 XXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLK 110
++ F FD + G + +EL+ L ++G +
Sbjct: 72 ----NGWRQHFISFDSDRSGTVDPQELQKALTTMGFR 104
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 18/121 (14%)
Query: 10 VFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGSLYQT 69
VF +FD N DG+I E +L D +L + D++ DGY+ NE +
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA 127
Query: 70 IMXXXXXXXXMKEA-----------FNVFDQNGDGYITVEELR-------SVLASLGLKQ 111
I + E F + D+N DG +T++E + S++ +L L
Sbjct: 128 IYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIVQALSLYD 187
Query: 112 G 112
G
Sbjct: 188 G 188
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Query: 56 GYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTV 115
G +D F +Y+ FNVFD+N DG I E L+ +G
Sbjct: 41 GQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTS--RGTLD 98
Query: 116 EDCKLMIKKVDVDGDGMVNYNE 137
E + K D+D DG + NE
Sbjct: 99 EKLRWAFKLYDLDNDGYITRNE 120
Score = 32.7 bits (73), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 16/75 (21%)
Query: 3 MDTELRRVFQMFDRNGDGKITRKELSDSLKNLGIY--------------IPDNELVQMIE 48
+D +LR F+++D + DG ITR E+ D + IY P+ + ++
Sbjct: 97 LDEKLRWAFKLYDLDNDGYITRNEMLDIVD--AIYQMVGNTVELPEEENTPEKRVDRIFA 154
Query: 49 KIDVNGDGYVDINEF 63
+D N DG + + EF
Sbjct: 155 MMDKNADGKLTLQEF 169
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 11/105 (10%)
Query: 50 IDVNGDGYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGL 109
D N DG ++ +EF ++ ++ AF ++D + DGYIT E+ ++ ++
Sbjct: 72 FDENKDGRIEFSEFIQAL-SVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQ 130
Query: 110 KQGRTVE----------DCKLMIKKVDVDGDGMVNYNEFKQMMKG 144
G TVE + +D + DG + EF++ K
Sbjct: 131 MVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKA 175
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 9 RVFQMFDRNGDGKITRKELSDSLK 32
R+F M D+N DGK+T +E + K
Sbjct: 151 RIFAMMDKNADGKLTLQEFQEGSK 174
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 82 EAFNV----FDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNE 137
EAF V FD NG+G I + L+ +L LG+ +T + K +I++V + +Y++
Sbjct: 48 EAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVP--KTHLELKRLIREVSSGSEETFSYSD 105
Query: 138 FKQMMKGGGFAALR 151
F +MM G A LR
Sbjct: 106 FLRMMLGKRSAILR 119
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 25/148 (16%)
Query: 11 FQMFDRNGDGKITRKELSDSLKNL--------------GIYIPDNELVQMIEKI-DVNGD 55
F FD++G+G I R + S + K + +Y L Q + I D +GD
Sbjct: 10 FTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGD 69
Query: 56 GYVDINEF--GSLYQ----TIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGL 109
+ EF G++ + + A V D +GDG +TV + L + G+
Sbjct: 70 QRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFGV 129
Query: 110 KQGRTVEDCKLMIKKVDVDGDGMVNYNE 137
+ + + +D DGDG V E
Sbjct: 130 PE----DLARQAAAALDTDGDGKVGETE 153
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 10 VFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEK-IDVNGDGYVDINEFGSLYQ 68
+F+ D NGDG ++ +E+ + + I + +L+Q+I K ID +G+G +D NEF Y
Sbjct: 5 LFKEIDVNGDGAVSYEEVK-AFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 69 TI 70
+I
Sbjct: 64 SI 65
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 9/66 (13%)
Query: 80 MKEA-FNVFDQNGDGYITVEELRSVLASLGLKQGRTVED---CKLMIKKVDVDGDGMVNY 135
M EA F D NGDG ++ EE+++ ++ + R +++ +L+ K +D DG+G ++
Sbjct: 1 MAEALFKEIDVNGDGAVSYEEVKAFVS-----KKRAIKNEQLLQLIFKSIDADGNGEIDQ 55
Query: 136 NEFKQM 141
NEF +
Sbjct: 56 NEFAKF 61
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF-GS 65
+ +F D N +G ++ +E+ L ++GI D + ++++ +D+N G + EF
Sbjct: 41 INELFYKLDTNHNGSLSHREIYTVLASVGIKKWD--INRILQALDINDRGNITYTEFMAG 98
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVL 104
Y+ +K AFN D++ DGYI+ ++ S++
Sbjct: 99 CYR---WKNIESTFLKAAFNKIDKDEDGYISKSDIVSLV 134
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEF 138
+ E F D N +G ++ E+ +VLAS+G+K+ D +++ +D++ G + Y EF
Sbjct: 41 INELFYKLDTNHNGSLSHREIYTVLASVGIKKW----DINRILQALDINDRGNITYTEF 95
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVED--CKLMIKKVDVDGDGMVNYNE 137
+K+AF + DQ+ G+I +EL+ L + R + D K +K D DGDG + +E
Sbjct: 44 VKKAFAIIDQDKSGFIEEDELKLFLQNFKA-DARALTDGETKTFLKAGDSDGDGKIGVDE 102
Query: 138 FKQMMKG 144
F ++K
Sbjct: 103 FTALVKA 109
Score = 29.3 bits (64), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGI---YIPDNELVQMIEKIDVNGDGYVDINE 62
++++ F + D++ G I EL L+N + D E ++ D +GDG + ++E
Sbjct: 43 DVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDE 102
Query: 63 FGSLYQT 69
F +L +
Sbjct: 103 FTALVKA 109
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 10/66 (15%)
Query: 83 AFNVFDQNGDGYITVEELRSVLASLG----------LKQGRTVEDCKLMIKKVDVDGDGM 132
AFN++D N DGYIT EE+ ++ ++ LK+ + + +K+D + DG+
Sbjct: 143 AFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGV 202
Query: 133 VNYNEF 138
V +EF
Sbjct: 203 VTIDEF 208
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 16/71 (22%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNLGIY--------------IPDNELVQMIEKIDV 52
L F ++D N DG IT++E+ D +K IY P + +K+D
Sbjct: 140 LNWAFNLYDINKDGYITKEEMLDIMK--AIYDMMGKCTYPVLKEDAPRQHVETFFQKMDK 197
Query: 53 NGDGYVDINEF 63
N DG V I+EF
Sbjct: 198 NKDGVVTIDEF 208
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 56 GYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTV 115
G + EF ++Y + F FD N DG + +E V+A G+T
Sbjct: 42 GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEY--VIALHMTSAGKTN 99
Query: 116 EDCKLMIKKVDVDGDGMVNYNE 137
+ + DVDG+G ++ NE
Sbjct: 100 QKLEWAFSLYDVDGNGTISKNE 121
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Query: 2 IMDTELRRVFQMFDRN-GDGKITRKELSDSLKNLGIYI-PDNELVQMIEKIDVNGDGYVD 59
+ EL +Q F + G+ITR+E P + D N DG +D
Sbjct: 23 FTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 82
Query: 60 INEFG-SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASL 107
E+ +L+ T ++ AF+++D +G+G I+ E+ ++ ++
Sbjct: 83 FKEYVIALHMT--SAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 129
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 56 GYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTV 115
G + EF ++Y + F FD N DG + +E V+A G+T
Sbjct: 41 GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEY--VIALHMTSAGKTN 98
Query: 116 EDCKLMIKKVDVDGDGMVNYNE 137
+ + DVDG+G ++ NE
Sbjct: 99 QKLEWAFSLYDVDGNGTISKNE 120
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Query: 2 IMDTELRRVFQMFDRN-GDGKITRKELSDSLKNLGIYIPDNELVQMI-EKIDVNGDGYVD 59
+ EL +Q F + G+ITR+E Q + D N DG +D
Sbjct: 22 FTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81
Query: 60 INEFG-SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASL 107
E+ +L+ T ++ AF+++D +G+G I+ E+ ++ ++
Sbjct: 82 FKEYVIALHMT--SAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 56 GYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTV 115
G + EF ++Y + F FD N DG + +E V+A G+T
Sbjct: 41 GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEY--VIALHMTSAGKTN 98
Query: 116 EDCKLMIKKVDVDGDGMVNYNE 137
+ + DVDG+G ++ NE
Sbjct: 99 QKLEWAFSLYDVDGNGTISKNE 120
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Query: 2 IMDTELRRVFQMFDRN-GDGKITRKELSDSLKNLGIYIPDNELVQMI-EKIDVNGDGYVD 59
+ EL +Q F + G+ITR+E Q + D N DG +D
Sbjct: 22 FTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81
Query: 60 INEFG-SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASL 107
E+ +L+ T ++ AF+++D +G+G I+ E+ ++ ++
Sbjct: 82 FKEYVIALHMT--SAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 56 GYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTV 115
G + EF ++Y + F FD N DG + +E V+A G+T
Sbjct: 41 GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEY--VIALHMTSAGKTN 98
Query: 116 EDCKLMIKKVDVDGDGMVNYNE 137
+ + DVDG+G ++ NE
Sbjct: 99 QKLEWAFSLYDVDGNGTISKNE 120
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Query: 2 IMDTELRRVFQMFDRN-GDGKITRKELSDSLKNLGIYI-PDNELVQMIEKIDVNGDGYVD 59
+ EL +Q F + G+ITR+E P + D N DG +D
Sbjct: 22 FTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81
Query: 60 INEFG-SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASL 107
E+ +L+ T ++ AF+++D +G+G I+ E+ ++ ++
Sbjct: 82 FKEYVIALHMT--SAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
T+ + VF+ +DR+ G I + EL +L G + D +I K D G G + ++F
Sbjct: 74 TDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFDDF- 132
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITV--EELRSVLASL 107
+ + + F +D + DG+I V E+ S++ S+
Sbjct: 133 ------IQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSI 171
Score = 33.5 bits (75), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 52/143 (36%), Gaps = 48/143 (33%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELV--QMIEKIDVNGDGYVDINEFG 64
L VFQ D++ G I+ EL +L N G + P N + +I D V+ +EF
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSN-GTWTPFNPVTVRSIISMFDRENKAGVNFSEFT 67
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
+++ YIT D + + +
Sbjct: 68 GVWK-------------------------YIT--------------------DWQNVFRT 82
Query: 125 VDVDGDGMVNYNEFKQMMKGGGF 147
D D GM++ NE KQ + G G+
Sbjct: 83 YDRDNSGMIDKNELKQALSGAGY 105
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 82 EAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEF 138
+AF VFD+ G ++V +LR +L LG K T + ++K V+VD +G ++Y +F
Sbjct: 9 KAFQVFDKESTGKVSVGDLRYMLTGLGEK--LTDAEVDELLKGVEVDSNGEIDYKKF 63
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 34/55 (61%)
Query: 9 RVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
+ FQ+FD+ GK++ +L L LG + D E+ ++++ ++V+ +G +D +F
Sbjct: 9 KAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 63
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGL-KQGRTVEDCKLMIKKVDVDGDGMVNYNEF 138
+K+AF V DQ+ G+I +EL+ L + T + K +K D DGDG + +E+
Sbjct: 44 IKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEW 103
Query: 139 KQMMKG 144
++K
Sbjct: 104 AALVKA 109
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 56 GYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTV 115
G+++ +EF +Y+ + FNVFD + +GYI +E L+ +G
Sbjct: 41 GHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTS--RGELN 98
Query: 116 EDCKLMIKKVDVDGDGMVNYNE 137
+ + D+D +G+++Y+E
Sbjct: 99 DKLIWAFQLYDLDNNGLISYDE 120
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 18/121 (14%)
Query: 10 VFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF------ 63
VF +FD + +G I KE +L +++L+ + D++ +G + +E
Sbjct: 68 VFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA 127
Query: 64 -----GSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEEL-------RSVLASLGLKQ 111
GS+ + + + FN+ D+N DG +T+EE +++++L L
Sbjct: 128 IYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDPTIVSALSLYD 187
Query: 112 G 112
G
Sbjct: 188 G 188
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 22/155 (14%)
Query: 10 VFQMFDRNGDGKITRKEL-----SDSLKNLGIYIPDNELVQMIEKIDVNGDGY-----VD 59
+F D NG+G+IT E+ D KNLG + Q + G G
Sbjct: 25 MFDYLDINGNGQITLDEIVSKASDDICKNLGATPAQTQRHQDCVEAFFRGCGLEYGKETK 84
Query: 60 INEFGSLYQTIMXXXXXXXXMKEA----------FNVFDQNGDGYITVEELRSVLASLGL 109
EF ++ + E F++FD++G G IT++E ++ G+
Sbjct: 85 FPEFLEGWKNLANADLAKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGRISGI 144
Query: 110 KQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMMKG 144
EDC+ + D+D G ++ +E + G
Sbjct: 145 SPSE--EDCEKTFQHCDLDNSGELDVDEMTRQHLG 177
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 80 MKEAFNVFDQNG-DGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEF 138
K AF++F DG I+ +EL V LG Q T E+ + I +VD DG G V+++EF
Sbjct: 20 FKAAFDIFVLGAEDGCISTKELGKVXRXLG--QNPTPEELQEXIDEVDEDGSGTVDFDEF 77
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 6 ELRRVFQMFDRNG-DGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E + F +F DG I+ KEL + LG EL + I+++D +G G VD +EF
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEF 77
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 56 GYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTV 115
G + EF ++Y + F FD N DG T++ + V+A G+T
Sbjct: 41 GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDG--TLDFKQYVIALHMTSAGKTN 98
Query: 116 EDCKLMIKKVDVDGDGMVNYNE 137
+ + DVDG+G ++ NE
Sbjct: 99 QKLEWAFSLYDVDGNGTISKNE 120
Score = 29.6 bits (65), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Query: 2 IMDTELRRVFQMFDRN-GDGKITRKELSDSLKNLGIYI-PDNELVQMIEKIDVNGDGYVD 59
+ EL +Q F + G+ITR+E P + D N DG +D
Sbjct: 22 FTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81
Query: 60 INEFG-SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASL 107
++ +L+ T ++ AF+++D +G+G I+ E+ ++ ++
Sbjct: 82 FKQYVIALHMT--SAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 56 GYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTV 115
G + EF ++Y + F FD N DG T++ + V+A G+T
Sbjct: 41 GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDG--TLDFKQYVIALHMTSAGKTN 98
Query: 116 EDCKLMIKKVDVDGDGMVNYNE 137
+ + DVDG+G ++ NE
Sbjct: 99 QKLEWAFSLYDVDGNGTISKNE 120
Score = 29.6 bits (65), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Query: 2 IMDTELRRVFQMFDRN-GDGKITRKELSDSLKNLGIYI-PDNELVQMIEKIDVNGDGYVD 59
+ EL +Q F + G+ITR+E P + D N DG +D
Sbjct: 22 FTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81
Query: 60 INEFG-SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASL 107
++ +L+ T ++ AF+++D +G+G I+ E+ ++ ++
Sbjct: 82 FKQYVIALHMT--SAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 84 FNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMMK 143
F++FD++G G IT++E ++ G+ + EDC+ + D+D G ++ +E +
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQ--EDCEATFRHCDLDNSGDLDVDEMTRQHL 176
Query: 144 G 144
G
Sbjct: 177 G 177
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 10 VFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINE 62
VF +FD++G G IT E K GI + D++ G +D++E
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 84 FNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMMK 143
F++FD++G G IT++E ++ G+ + EDC+ + D+D G ++ +E +
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQ--EDCEATFRHCDLDNSGDLDVDEMTRQHL 176
Query: 144 G 144
G
Sbjct: 177 G 177
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 10 VFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINE 62
VF +FD++G G IT E K GI + D++ G +D++E
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 84 FNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMMK 143
F++FD++G G IT++E ++ G+ + EDC+ + D+D G ++ +E +
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQ--EDCEATFRHCDLDNSGDLDVDEMTRQHL 176
Query: 144 G 144
G
Sbjct: 177 G 177
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 10 VFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINE 62
VF +FD++G G IT E K GI + D++ G +D++E
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQ 140
KEAF +FD++ D +T EEL +V+ +LG T + ++K D D G + F
Sbjct: 17 KEAFQLFDKDNDNKLTAEELGTVMRALGA--NPTKQKISEIVKDYDKDNSGKFDQETFLT 74
Query: 141 MM 142
+M
Sbjct: 75 IM 76
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
E + FQ+FD++ D K+T +EL ++ LG ++ ++++ D + G D F
Sbjct: 15 EYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETF 72
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
KEAF V DQN DG I ++LR A++G + E+ MIK + G +N+ F
Sbjct: 14 FKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKN-EELDAMIK----EASGPINFTVFL 68
Query: 140 QMM 142
M
Sbjct: 69 TMF 71
>pdb|2FCD|A Chain A, Solution Structure Of N-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 78
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 8 RRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMI 47
+ +F +FD+ G G I + L D L+ +G Y P N+LVQ I
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIG-YNPTNQLVQDI 45
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVED--CKLMIKKVDVDGDGMVNYNE 137
+K+AF + DQ+ G+I +EL+ L + R + D K +K D DGDG + +E
Sbjct: 43 VKKAFAIIDQDKSGFIEEDELKLFLQNFKA-DARALTDGETKTFLKAGDSDGDGKIGVDE 101
Query: 138 FKQMMKG 144
+ ++K
Sbjct: 102 WTALVKA 108
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGI---YIPDNELVQMIEKIDVNGDGYVDINE 62
++++ F + D++ G I EL L+N + D E ++ D +GDG + ++E
Sbjct: 42 DVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDE 101
Query: 63 FGSLYQT 69
+ +L +
Sbjct: 102 WTALVKA 108
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGR---TVEDCKLMIKKVDVDGDGMVNYN 136
+KE F + D + G+I +EL+ L + G T + K + D DGDG +
Sbjct: 43 LKEIFRILDNDQSGFIEEDELKYFLQRF--ESGARVLTASETKTFLAAADHDGDGKIGAE 100
Query: 137 EFKQMMKG 144
EF++M++
Sbjct: 101 EFQEMVQS 108
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 84 FNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMMK 143
F++FD++G G IT++E ++ G+ + EDC+ + D+D G ++ +E +
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQ--EDCEATFRHCDLDDSGDLDVDEMTRQHL 176
Query: 144 G 144
G
Sbjct: 177 G 177
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 10 VFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINE 62
VF +FD++G G IT E K GI + D++ G +D++E
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDDSGDLDVDE 170
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGL-KQGRTVEDCKLMIKK 124
+Q + +K+ F++ D++ DG+I +EL S+L + + ++ K ++
Sbjct: 29 FFQMVGLKKKSADDVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAA 88
Query: 125 VDVDGDGMVNYNEFKQMM 142
D DGDG + EF ++
Sbjct: 89 GDKDGDGKIGVEEFSTLV 106
Score = 29.3 bits (64), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 50 IDVNGDGYVDINEFGSLYQTIMXXXX--XXXXMKEAFNVFDQNGDGYITVEELRSVLA 105
+D + DG++D +E GS+ + K D++GDG I VEE +++A
Sbjct: 50 LDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVA 107
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 84 FNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMMK 143
F++FD++G G IT++E ++ G+ + EDC+ + D+D G ++ +E +
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQ--EDCEATFRHCDLDNAGDLDVDEMTRQHL 176
Query: 144 G 144
G
Sbjct: 177 G 177
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 10 VFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINE 62
VF +FD++G G IT E K GI + D++ G +D++E
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDE 170
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLG--LKQGRTVEDCKLMIKKVDVDGDGMVNYNE 137
+KEAF++FD N G I EL+ + +LG +K+ +E ++ + D +G+G + +++
Sbjct: 9 IKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILE----LMNEYDREGNGYIGFDD 64
Query: 138 FKQMM 142
F +M
Sbjct: 65 FLDIM 69
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 84 FNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMM 142
F++ IT E LR LG+ +G + ED + M+++ D+DGDG +N EF +M
Sbjct: 46 FSLLADPERHLITAESLRRNSGILGI-EGMSKEDAQGMVREGDLDGDGALNQTEFCVLM 103
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 46 MIEKIDVNGDGYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLA 105
+ D G V +F + +I+ ++ FN++D N DGYI EE+ ++
Sbjct: 61 LFNAFDTTQTGSVKFEDFVTAL-SILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVK 119
Query: 106 SLG----------LKQGRTVEDCKLMIKKVDVDGDGMVNYNEF 138
++ LK+ + + +K+D + DG+V +EF
Sbjct: 120 AIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 162
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 12/70 (17%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKN----LGIYI--------PDNELVQMIEKIDVN 53
+LR F ++D N DG I ++E+ D +K +G Y P + +K+D N
Sbjct: 93 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKN 152
Query: 54 GDGYVDINEF 63
DG V ++EF
Sbjct: 153 KDGIVTLDEF 162
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 2/89 (2%)
Query: 56 GYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTV 115
G V+ F +Y FN FD G + E+ + L+ L +G
Sbjct: 34 GVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSI--LLRGTVH 91
Query: 116 EDCKLMIKKVDVDGDGMVNYNEFKQMMKG 144
E + D++ DG +N E ++K
Sbjct: 92 EKLRWTFNLYDINKDGYINKEEMMDIVKA 120
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLG 108
+ AF +FD+N DGYI +EEL +L + G
Sbjct: 7 LANAFRIFDKNADGYIDIEELGEILRATG 35
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 4 DTELRRVFQMFDRNGDGKITRKELSDSLKNLG 35
+ EL F++FD+N DG I +EL + L+ G
Sbjct: 4 EEELANAFRIFDKNADGYIDIEELGEILRATG 35
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 39 PDNELVQMIEKIDVNGDGYVDINEFGSLYQT 69
+ EL D N DGY+DI E G + +
Sbjct: 3 SEEELANAFRIFDKNADGYIDIEELGEILRA 33
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 46 MIEKIDVNGDGYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLA 105
+ D G V +F + +I+ ++ FN++D N DGYI EE+ ++
Sbjct: 94 LFNAFDTTQTGSVKFEDFVTAL-SILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVK 152
Query: 106 SLG----------LKQGRTVEDCKLMIKKVDVDGDGMVNYNEF 138
++ LK+ + + +K+D + DG+V +EF
Sbjct: 153 AIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 195
Score = 33.5 bits (75), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 12/70 (17%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKN----LGIYI--------PDNELVQMIEKIDVN 53
+LR F ++D N DG I ++E+ D +K +G Y P + +K+D N
Sbjct: 126 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKN 185
Query: 54 GDGYVDINEF 63
DG V ++EF
Sbjct: 186 KDGIVTLDEF 195
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 2/89 (2%)
Query: 56 GYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTV 115
G V+ F +Y FN FD G + E+ + L+ L +G
Sbjct: 67 GVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSI--LLRGTVH 124
Query: 116 EDCKLMIKKVDVDGDGMVNYNEFKQMMKG 144
E + D++ DG +N E ++K
Sbjct: 125 EKLRWTFNLYDINKDGYINKEEMMDIVKA 153
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 56 GYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTV 115
G + +F S+Y + F FD N DG + +E V+A G+T
Sbjct: 49 GRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEY--VIALHXTTAGKTN 106
Query: 116 EDCKLMIKKVDVDGDGMVNYNE 137
+ + DVDG+G ++ NE
Sbjct: 107 QKLEWAFSLYDVDGNGTISKNE 128
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 59/122 (48%), Gaps = 13/122 (10%)
Query: 6 ELRRVFQMFDRN-GDGKITRKELSDSLKNLGIYIPDNELVQMIEKI----DVNGDGYVDI 60
EL +Q F ++ G+IT+++ + PD + + + D N DG +D
Sbjct: 34 ELCSWYQSFLKDCPTGRITQQQFQSIY---AKFFPDTDPKAYAQHVFRSFDSNLDGTLDF 90
Query: 61 NEFG-SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCK 119
E+ +L+ T ++ AF+++D +G+G I+ E+ ++ ++ + T ED K
Sbjct: 91 KEYVIALHXTTAGKTNQK--LEWAFSLYDVDGNGTISKNEVLEIVXAIF--KXITPEDVK 146
Query: 120 LM 121
L+
Sbjct: 147 LL 148
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 46 MIEKIDVNGDGYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLA 105
+ D G V +F + +I+ ++ FN++D N DGYI EE+ ++
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTAL-SILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVK 116
Query: 106 SLG----------LKQGRTVEDCKLMIKKVDVDGDGMVNYNEF 138
++ LK+ + + +K+D + DG+V +EF
Sbjct: 117 AIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 159
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 12/70 (17%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKN----LGIYI--------PDNELVQMIEKIDVN 53
+LR F ++D N DG I ++E+ D +K +G Y P + +K+D N
Sbjct: 90 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKN 149
Query: 54 GDGYVDINEF 63
DG V ++EF
Sbjct: 150 KDGIVTLDEF 159
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 2/89 (2%)
Query: 56 GYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTV 115
G V+ + F +Y FN FD G + E+ + L+ L +G
Sbjct: 31 GVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSI--LLRGTVH 88
Query: 116 EDCKLMIKKVDVDGDGMVNYNEFKQMMKG 144
E + D++ DG +N E ++K
Sbjct: 89 EKLRWTFNLYDINKDGYINKEEMMDIVKA 117
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 92 DGYITVEELRSVLASLGLK---QGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMMKG 144
DG + EEL+ L G+ ++E C++MI +D D G + +N FK++
Sbjct: 13 DGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA 68
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 12/97 (12%)
Query: 19 DGKITRKELSDSLKNLGI---YIPDN-ELVQ-MIEKIDVNGDGYVDINEFGSLYQTIMXX 73
DG++ +EL L GI Y P + E + MI +D + G + N F L+ +
Sbjct: 13 DGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL--- 69
Query: 74 XXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLK 110
KE F DQ+G G + ELR + +G +
Sbjct: 70 ----NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYR 102
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 92 DGYITVEELRSVLASLGLK---QGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMMKG 144
DG + EEL+ L G+ ++E C++MI +D D G + +N FK++
Sbjct: 13 DGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA 68
Score = 34.3 bits (77), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 12/97 (12%)
Query: 19 DGKITRKELSDSLKNLGI---YIPDN-ELVQ-MIEKIDVNGDGYVDINEFGSLYQTIMXX 73
DG++ +EL L GI Y P + E + MI +D + G + N F L+ +
Sbjct: 13 DGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL--- 69
Query: 74 XXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLK 110
KE F DQ+G G + ELR + +G +
Sbjct: 70 ----NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYR 102
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFK 139
++ F D N G + EE R++ L ++ D + + +++D D DG + + EF
Sbjct: 29 LRSVFAACDANRSGRLEREEFRALCTELRVRPA----DAEAVFQRLDADRDGAITFQEFA 84
Query: 140 QMMKG 144
+ G
Sbjct: 85 RGFLG 89
Score = 33.9 bits (76), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
LR VF D N G++ R+E L + D E V +++D + DG + EF
Sbjct: 27 ARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEAV--FQRLDADRDGAITFQEFA 84
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 34.3 bits (77), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 59 DINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASL--GLKQGRTVE 116
D E +QT +K+ F D + GY+ EEL+ L G ++ T
Sbjct: 23 DTFEPQKFFQTSGLSKMSANQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARE-LTES 81
Query: 117 DCKLMIKKVDVDGDGMVNYNEFKQMMKG 144
+ K ++ D DGDG + EF++M+
Sbjct: 82 ETKSLMAAADNDGDGKIGAEEFQEMVHS 109
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 12/70 (17%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKN----LGIYI--------PDNELVQMIEKIDVN 53
+LR F ++D N DG I ++E+ D +K +G Y P + +K+D N
Sbjct: 90 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKN 149
Query: 54 GDGYVDINEF 63
DG V ++EF
Sbjct: 150 KDGIVTLDEF 159
Score = 32.7 bits (73), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 11/103 (10%)
Query: 46 MIEKIDVNGDGYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLA 105
+ D G V +F + +I+ ++ FN++D N DGYI EE+ ++
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTAL-SILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVK 116
Query: 106 SLG----------LKQGRTVEDCKLMIKKVDVDGDGMVNYNEF 138
++ L + + + +K+D + DG+V +EF
Sbjct: 117 AIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLDEF 159
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 2/89 (2%)
Query: 56 GYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTV 115
G V+ + F +Y FN FD G + E+ + L+ L +G
Sbjct: 31 GVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSI--LLRGTVH 88
Query: 116 EDCKLMIKKVDVDGDGMVNYNEFKQMMKG 144
E + D++ DG +N E ++K
Sbjct: 89 EKLRWTFNLYDINKDGYINKEEMMDIVKA 117
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 84 FNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMMK 143
F++ D++ +G I+++E ++ S G+ Q + EDC+ + D+D G ++ +E +
Sbjct: 115 FDIIDKDQNGAISLDEWKAYTKSAGIIQ--SSEDCEETFRVCDIDESGQLDVDEMTRQHL 172
Query: 144 G 144
G
Sbjct: 173 G 173
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 84 FNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMMK 143
F++ D++ +G IT++E ++ + G+ Q + EDC+ + D+D G ++ +E +
Sbjct: 115 FDIVDKDQNGAITLDEWKAYTKAAGIIQ--SSEDCEETFRVCDIDESGQLDVDEMTRQHL 172
Query: 144 G 144
G
Sbjct: 173 G 173
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 33.9 bits (76), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 84 FNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMMK 143
F++ D++ +G IT++E ++ + G+ Q + EDC+ + D+D G ++ +E +
Sbjct: 115 FDIVDKDQNGAITLDEWKAYTKAAGIIQ--SSEDCEETFRVCDIDESGQLDVDEXTRQHL 172
Query: 144 G 144
G
Sbjct: 173 G 173
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 33.9 bits (76), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLK-NLGIYIPDNELV----QMIEKIDVNGDGYVDI 60
+L FQ++D + DGKI+R E+ L+ +G+ + + +L + +++ D +GDG V
Sbjct: 115 KLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSF 174
Query: 61 NEF 63
EF
Sbjct: 175 VEF 177
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 33.5 bits (75), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGR-TVEDCKLMIKK 124
+Q + +K+ F++ D++ G+I +EL S+L + ++ K ++
Sbjct: 29 FFQMVGLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAA 88
Query: 125 VDVDGDGMVNYNEFKQMM 142
D DGDG + EF ++
Sbjct: 89 GDKDGDGKIGVEEFSTLV 106
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPD---NELVQMIEKIDVNGDGYVDINE 62
++++VF + D++ G I EL LK D E ++ D +GDG + + E
Sbjct: 42 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 63 FGSL 66
F +L
Sbjct: 102 FSTL 105
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 33.5 bits (75), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 14/73 (19%)
Query: 6 ELRRVFQMFDRNGDGK--------ITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGY 57
EL+ +F+ +D+ GDG+ + + E LK + L ++ E++D NGDG
Sbjct: 6 ELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMST------LDELFEELDKNGDGE 59
Query: 58 VDINEFGSLYQTI 70
V EF L + I
Sbjct: 60 VSFEEFQVLVKKI 72
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 41 NELVQMIEKIDVNGDGYVDINEFGSLYQT-IMXXXXXXXXMKEAFNVFDQNGDGYITVEE 99
EL + EK D GDG + E L QT + E F D+NGDG ++ EE
Sbjct: 5 EELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMSTLDELFEELDKNGDGEVSFEE 64
Query: 100 LRSVLASL 107
+ ++ +
Sbjct: 65 FQVLVKKI 72
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 33.1 bits (74), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGL-KQGRTVEDCKLMIKK 124
+Q + +K+ F++ D++ G+I +EL S+L + + ++ K ++
Sbjct: 29 FFQMVGLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAA 88
Query: 125 VDVDGDGMVNYNEFKQMM 142
D DGDG + EF ++
Sbjct: 89 GDKDGDGKIGVEEFSTLV 106
Score = 29.6 bits (65), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPD---NELVQMIEKIDVNGDGYVDINE 62
++++VF + D++ G I EL LK D E ++ D +GDG + + E
Sbjct: 42 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 63 FGSL 66
F +L
Sbjct: 102 FSTL 105
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 26/160 (16%)
Query: 9 RVFQMFDRNGDGKITRKELSDSLKN-LGIYIPDN----ELVQMIEK-----IDVNGDGYV 58
+++Q FD + +G I KEL D ++ L P + E VQ I+K D DG +
Sbjct: 15 QIWQHFDADDNGYIEGKELDDFFRHXLKKLQPKDKITDERVQQIKKSFXSAYDATFDGRL 74
Query: 59 DINEFGS----------LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLG 108
I E + L + + +D + GYI+ EL++ L L
Sbjct: 75 QIEELANXILPQEENFLLIFRREAPLDNSVEFXKIWRKYDADSSGYISAAELKNFLKDLF 134
Query: 109 LKQGRTVEDCKL------MIKKVDVDGDGMVNYNEFKQMM 142
L+ + + KL K D + DG ++ N+ +++
Sbjct: 135 LQHKKKIPPNKLDEYTDAXXKIFDKNKDGRLDLNDLARIL 174
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 33.1 bits (74), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGL-KQGRTVEDCKLMIKKVDVDGDGMVNYNEF 138
+K+ F++ D++ G+I +EL S+L + + ++ K ++ D DGDG + EF
Sbjct: 7 VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 66
Query: 139 KQMM 142
++
Sbjct: 67 STLV 70
Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPD---NELVQMIEKIDVNGDGYVDINE 62
++++VF + D++ G I EL LK D E ++ D +GDG + + E
Sbjct: 6 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 65
Query: 63 FGSL 66
F +L
Sbjct: 66 FSTL 69
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 32.7 bits (73), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVED--CKLMIKKVDVDGDGMVNYNE 137
+K+AF + Q+ G+I +EL+ L + R + D K +K D DGDG + +E
Sbjct: 43 VKKAFAIIAQDKSGFIEEDELKLFLQNFKA-DARALTDGETKTFLKAGDSDGDGKIGVDE 101
Query: 138 FKQMMKG 144
+ ++K
Sbjct: 102 WTALVKA 108
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 32.7 bits (73), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 11/105 (10%)
Query: 5 TELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFG 64
T+ + VF+ +DR+ G I + EL +L G + D +I K D G G + ++F
Sbjct: 71 TDWQNVFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHDILIRKFDRQGRGQIAFDDF- 127
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITV--EELRSVLASL 107
+ + + F +D + DG+I V E+ S++ S+
Sbjct: 128 ------IQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSI 166
Score = 29.6 bits (65), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 48/140 (34%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELV--QMIEKIDVNGDGYVDINEFG 64
L VFQ D++ G I+ EL +L N G + P N + +I D V+ +EF
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSN-GTWTPFNPVTVRSIISMFDRENKAGVNFSEFT 64
Query: 65 SLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKK 124
+++ YIT D + + +
Sbjct: 65 GVWK-------------------------YIT--------------------DWQNVFRT 79
Query: 125 VDVDGDGMVNYNEFKQMMKG 144
D D GM++ NE KQ + G
Sbjct: 80 YDRDNSGMIDKNELKQALSG 99
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 32.7 bits (73), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 13 MFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINE 62
M D+N DG+I E + L LG + E + ++D NG+G + ++E
Sbjct: 110 MCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNGELSLDE 157
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 88 DQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNE 137
D+N DG I +E + L +LG+ + E +VD +G+G ++ +E
Sbjct: 112 DKNADGQINADEFAAWLTALGMSKAEAAE----AFNQVDTNGNGELSLDE 157
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 32.7 bits (73), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQ 140
KE + FD NG+G I + L+ +L LG+ +T + K +I +V +Y +F +
Sbjct: 35 KEKYMEFDLNGNGDIDIMSLKRMLEKLGVP--KTHLELKKLIGEVSSGSGETFSYPDFLR 92
Query: 141 MMKGGGFAALR 151
MM G A L+
Sbjct: 93 MMLGKRSAILK 103
>pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|L Chain L, Crystal Structure Of Human M-Calpain Form Ii
Length = 699
Score = 32.7 bits (73), Expect = 0.088, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 92 DGYITVEELRSVLASLGLKQ------GRTVEDCKLMIKKVDVDGDGMVNYNEF 138
D I+ EL+++L + K+ G ++E CK+M+ +D DG G + EF
Sbjct: 544 DAEISAFELQTILRRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEF 596
>pdb|1U5I|A Chain A, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
Length = 700
Score = 32.7 bits (73), Expect = 0.092, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 92 DGYITVEELRSVLASLGLKQ------GRTVEDCKLMIKKVDVDGDGMVNYNEF 138
D I+ EL+++L + K+ G ++E CK+M+ +D DG G + EF
Sbjct: 545 DAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEF 597
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 32.7 bits (73), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Query: 59 DINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVE-D 117
D E +QT +K+ F D + GY+ +EL+ L E +
Sbjct: 22 DTFEPQKFFQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESE 81
Query: 118 CKLMIKKVDVDGDGMVNYNEFKQMMKG 144
K ++ D DGDG + +EF++M+
Sbjct: 82 TKSLMDAADNDGDGKIGADEFQEMVHS 108
>pdb|3DF0|A Chain A, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|A Chain A, Structure Of M-Calpain In Complex With Calpastatin
Length = 714
Score = 32.7 bits (73), Expect = 0.092, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 92 DGYITVEELRSVLASLGLKQ------GRTVEDCKLMIKKVDVDGDGMVNYNEF 138
D I+ EL+++L + K+ G ++E CK+M+ +D DG G + EF
Sbjct: 545 DAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEF 597
>pdb|1DF0|A Chain A, Crystal Structure Of M-Calpain
Length = 700
Score = 32.7 bits (73), Expect = 0.092, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 92 DGYITVEELRSVLASLGLKQ------GRTVEDCKLMIKKVDVDGDGMVNYNEF 138
D I+ EL+++L + K+ G ++E CK+M+ +D DG G + EF
Sbjct: 545 DAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEF 597
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEF 138
+KE F + D + G IT +EL+ L +G + + + K ++ D+D G ++Y EF
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMES--EIKDLMDAADIDKSGTIDYGEF 81
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 10 VFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDIN 61
+F M DRN G + E+ +L+ LG YI + ++ ++ G + D+N
Sbjct: 122 LFVMNDRNRSGTLEPHEILPALQQLGFYI-NQRTSLLLHRLFARGMAFCDLN 172
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGL-KQGRTVEDCKLMIKKVDVDGDGMVNYNEF 138
+K+AF DQ+ G+I +EL+ L + T + K +K D DGDG + E+
Sbjct: 44 IKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEEW 103
Query: 139 KQMMKG 144
++K
Sbjct: 104 VALVKA 109
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGL-KQGRTVEDCKLMIKKVDVDGDGMVNYNEF 138
+K+AF DQ+ G+I +EL+ L + T + K +K D DGDG + E+
Sbjct: 43 IKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEEW 102
Query: 139 KQMMKG 144
++K
Sbjct: 103 VALVKA 108
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 81 KEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQ 140
KE + FD NG+G I + L+ +L LG+ +T + K +I +V +Y +F +
Sbjct: 54 KEKYMEFDLNGNGDIDIMSLKRMLEKLGVP--KTHLELKKLIGEVSSGSGETFSYPDFLR 111
Query: 141 MMKGGGFAALR 151
MM G A L+
Sbjct: 112 MMLGKRSAILK 122
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 83 AFNVFDQNGDGYITVEELRSVLASL---GLKQGRTVEDCKLMIKKV----DVDGDGMVNY 135
AF +FD + DG + E+L ++ L G + + K +I + D+D DG +N
Sbjct: 134 AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINL 193
Query: 136 NEFKQMM-KGGGFAA 149
+EF+ ++ + FA+
Sbjct: 194 SEFQHVISRSPDFAS 208
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 9/63 (14%)
Query: 10 VFQMFDRNGDGKITRKELSDSLKNLG-----IYIPDNELVQMIEKI----DVNGDGYVDI 60
F++FD + DG + R++LS + L + +E+ Q+I+ I D++ DG +++
Sbjct: 134 AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINL 193
Query: 61 NEF 63
+EF
Sbjct: 194 SEF 196
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 83 AFNVFDQNGDGYITVEELRSVLASL---GLKQGRTVEDCKLMIKKV----DVDGDGMVNY 135
AF +FD + DG + E+L ++ L G + + K +I + D+D DG +N
Sbjct: 103 AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINL 162
Query: 136 NEFKQMM-KGGGFAA 149
+EF+ ++ + FA+
Sbjct: 163 SEFQHVISRSPDFAS 177
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 9/63 (14%)
Query: 10 VFQMFDRNGDGKITRKELSDSLKNLG-----IYIPDNELVQMIEKI----DVNGDGYVDI 60
F++FD + DG + R++LS + L + +E+ Q+I+ I D++ DG +++
Sbjct: 103 AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINL 162
Query: 61 NEF 63
+EF
Sbjct: 163 SEF 165
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 13/113 (11%)
Query: 47 IEKIDVNGDGYVDINEFGSLYQTI-----MXXXXXXXXMKEAFNVFDQNGDGY---ITVE 98
++++DV GDG++ ++ + I + +E V DQ G I+VE
Sbjct: 20 MQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVE 79
Query: 99 ELR-----SVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMMKGGG 146
E S+L G ++ V +M +D D DG V+ EFK ++ G
Sbjct: 80 EAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVG 132
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 12/54 (22%), Positives = 27/54 (50%)
Query: 10 VFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
++ D + DG ++ E L+ +G + D++ + +D N +G + +EF
Sbjct: 107 MYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEF 160
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 30/68 (44%)
Query: 42 ELVQMIEKIDVNGDGYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELR 101
EL M ++ID +G+ VD EF + F D+NG G +T +E
Sbjct: 131 ELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFA 190
Query: 102 SVLASLGL 109
+ +++ L
Sbjct: 191 AWASAVKL 198
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 84 FNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEF 138
F+ D +G+ + EE + + L G VED + K++D +G G V ++EF
Sbjct: 136 FDEIDASGNMLVDEEEFKRAVPKLEA-WGAKVEDPAALFKELDKNGTGSVTFDEF 189
>pdb|3A8R|A Chain A, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
pdb|3A8R|B Chain B, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
Length = 179
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 4 DTELRRVFQMFDRNGDGKITRKE------LSDSLKNLG-IYIPDNELVQMI-EKIDVNGD 55
D LR F M D+N DG++T +E LS S L I +E +I E++D
Sbjct: 97 DNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNL 156
Query: 56 GYVDINEFGSL 66
GY+++ + +L
Sbjct: 157 GYIEMEDLEAL 167
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 84 FNVFDQNGDGYITVEELRSVLA 105
F++ D+N DG +T EE++ ++A
Sbjct: 104 FDMVDKNADGRLTAEEVKEIIA 125
>pdb|1QAS|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate
Phosphodiesterase Delta 1
pdb|1QAS|B Chain B, 1-Phosphatidylinositol-4,5-Bisphosphate
Phosphodiesterase Delta 1
pdb|1QAT|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate
Phosphodiesterase Delta Complex With Samarium (Iii)
Chloride
pdb|1QAT|B Chain B, 1-Phosphatidylinositol-4,5-Bisphosphate
Phosphodiesterase Delta Complex With Samarium (Iii)
Chloride
Length = 622
Score = 31.6 bits (70), Expect = 0.18, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 15 DRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGSLYQTIMXXX 74
D+N D K+ KEL D LK L I + D ++ + D + ++ E + Y+ +
Sbjct: 19 DKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQRA 78
Query: 75 XXXXXMKEA 83
+EA
Sbjct: 79 EIDRAFEEA 87
>pdb|1DJG|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Lanthanum
pdb|1DJG|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Lanthanum
pdb|1DJH|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Barium
pdb|1DJH|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Barium
pdb|1DJI|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Calcium
pdb|1DJI|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Calcium
pdb|1DJW|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJW|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJX|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJX|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJY|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJY|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJZ|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-4,5-Bisphosphate
pdb|1DJZ|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-4,5-Bisphosphate
pdb|2ISD|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat
pdb|2ISD|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat
Length = 624
Score = 31.6 bits (70), Expect = 0.18, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 15 DRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGSLYQTIMXXX 74
D+N D K+ KEL D LK L I + D ++ + D + ++ E + Y+ +
Sbjct: 21 DKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQRA 80
Query: 75 XXXXXMKEA 83
+EA
Sbjct: 81 EIDRAFEEA 89
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 80 MKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVED--CKLMIKKVDVDGDGMVNYNE 137
+K+AF + Q+ G+I +EL+ L + R + D K +K D DGDG + ++
Sbjct: 43 VKKAFAIIAQDKSGFIEEDELKLFLQNFKA-DARALTDGETKTFLKAGDSDGDGKIGVDD 101
Query: 138 FKQMMKG 144
+ ++K
Sbjct: 102 WTALVKA 108
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGL-KQGRTVEDCKLMIKK 124
+Q + +K+ F++ D++ G+I +EL +L + + ++ K+++
Sbjct: 30 FFQMVGLKKKSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAA 89
Query: 125 VDVDGDGMVNYNEFKQMM 142
D DGDG + +EF ++
Sbjct: 90 GDKDGDGKIGVDEFSTLV 107
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPD------NELVQMIEKIDVNGDGYVD 59
++++VF M D++ G I EL LK + PD E ++ D +GDG +
Sbjct: 43 DVKKVFHMLDKDKSGFIEEDELGFILKG---FSPDARDLSAKETKMLMAAGDKDGDGKIG 99
Query: 60 INEFGSL 66
++EF +L
Sbjct: 100 VDEFSTL 106
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 66 LYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGL-KQGRTVEDCKLMIKK 124
+Q + +K+ F++ D++ G+I +EL S+L + + ++ K ++
Sbjct: 29 FFQMVGLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAA 88
Query: 125 VDVDGDGMVNYNEFKQMM 142
D DG G + EF ++
Sbjct: 89 GDKDGSGKIEVEEFSTLV 106
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 30.4 bits (67), Expect = 0.38, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 19/102 (18%)
Query: 41 NELVQMIEKIDVNGDGYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEEL 100
NE+ I D G +NEF + +FN FD+ G + E+
Sbjct: 705 NEVENQILTRDAKGISQEQMNEF-----------------RASFNHFDRKKTGMMDCEDF 747
Query: 101 RSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMM 142
R+ L S+G G E ++M VD + G+V + F M
Sbjct: 748 RACLISMGYNMGEA-EFARIM-SIVDPNRMGVVTFQAFIDFM 787
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 13/112 (11%)
Query: 48 EKIDVNGDGYVDINEFGSLYQTI-----MXXXXXXXXMKEAFNVFDQNGDGY---ITVEE 99
+++DV GDG++ ++ + I + +E V DQ G I+VEE
Sbjct: 21 QRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEE 80
Query: 100 LR-----SVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMMKGGG 146
S+L G ++ V + +D D DG V+ EFK ++ G
Sbjct: 81 AAVNATDSLLKXKGEEKAXAVIQSLIXYDCIDTDKDGYVSLPEFKAFLQAVG 132
Score = 25.8 bits (55), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 12/53 (22%), Positives = 26/53 (49%)
Query: 11 FQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEF 63
+ D + DG ++ E L+ +G + D++ + +D N +G + +EF
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEF 160
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 84 FNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMMK 143
F++FD++G G I+++E ++ G+ + ED + K D+D G ++ +E +
Sbjct: 122 FDIFDKDGSGSISLDEWKTYGGISGI--CPSDEDAEKTFKHCDLDNSGKLDVDEMTRQHL 179
Query: 144 G 144
G
Sbjct: 180 G 180
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 10 VFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINE 62
VF +FD++G G I+ E GI D + + + D++ G +D++E
Sbjct: 121 VFDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDE 173
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 84 FNVFDQNGDGYITVEELRS-----VLASLGLKQGRT---VEDCKLMIKKVDVDGDGMVNY 135
FN D NG+G IT++E+ S + A LG +T E + KK+ +D V +
Sbjct: 29 FNFLDINGNGKITLDEIVSKASDDICAKLGATPAQTQRHQEAVEAFFKKIGLDYGKEVEF 88
Query: 136 NEF 138
F
Sbjct: 89 PAF 91
>pdb|1IJ5|A Chain A, Metal-Free Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
pdb|1IJ6|A Chain A, Ca2+-Bound Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
Length = 323
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 57/132 (43%), Gaps = 10/132 (7%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGDGYVDINEFGSL 66
LR++F +G GK + ++L L IP+ L ++ ++ + G +
Sbjct: 124 LRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMS------- 176
Query: 67 YQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKLMIKKVD 126
Y T++ + F D N +G ++ +E R LG + ++V+D + + D
Sbjct: 177 YITLVAVANDLAALVADFRKIDTNSNGTLSRKEFREHFVRLGFDK-KSVQDA--LFRYAD 233
Query: 127 VDGDGMVNYNEF 138
D V ++E+
Sbjct: 234 EDESDDVGFSEY 245
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Query: 11 FQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQ--MIEKIDVNGDGYVDINEFGSLYQ 68
F+ D N +G ++RKE + LG D + VQ + D + V +E+ L
Sbjct: 194 FRKIDTNSNGTLSRKEFREHFVRLGF---DKKSVQDALFRYADEDESDDVGFSEYVHLGL 250
Query: 69 TIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGLKQ-GRTVEDCKLMIKKVDV 127
++ AF FD++G ++ EE++ VL + + R + + + VDV
Sbjct: 251 CLLVLRILY-----AFADFDKSGQ--LSKEEVQKVLEDAHIPESARKKFEHQFSV--VDV 301
Query: 128 DGDGMVNYNEF 138
D ++Y EF
Sbjct: 302 DDSKSLSYQEF 312
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 50 IDVNGDGYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGL 109
DV +G ++ EF +K AF ++D G+I EEL+ ++ +L L
Sbjct: 83 FDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVAL-L 141
Query: 110 KQGRTV--ED-CKLMIKK----VDVDGDGMVNYNEFK 139
+ V ED ++M+ K D DG ++ +E+K
Sbjct: 142 HESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWK 178
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 50 IDVNGDGYVDINEFGSLYQTIMXXXXXXXXMKEAFNVFDQNGDGYITVEELRSVLASLGL 109
DV +G ++ EF +K AF ++D G+I EEL+ ++ +L L
Sbjct: 83 FDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVAL-L 141
Query: 110 KQGRTV--ED-CKLMIKK----VDVDGDGMVNYNEFK 139
+ V ED ++M+ K D DG ++ +E+K
Sbjct: 142 HESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWK 178
>pdb|3S8V|A Chain A, Crystal Structure Of Lrp6-Dkk1 Complex
pdb|3S8V|B Chain B, Crystal Structure Of Lrp6-Dkk1 Complex
pdb|3S8Z|A Chain A, Crystal Structure Of Lrp6-E3e4
Length = 623
Score = 28.9 bits (63), Expect = 1.1, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 8/57 (14%)
Query: 4 DTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELV------QMIEKIDVNG 54
D++LRR+ + D +G +I ++ S+ L+ +G+ + +N L QMIEKID+ G
Sbjct: 500 DSDLRRI-ESSDLSGANRIVLED-SNILQPVGLTVFENWLYWIDKQQQMIEKIDMTG 554
>pdb|3S2K|A Chain A, Structural Basis Of Wnt Signaling Inhibition By Dickkopf
Binding To Lrp56.
pdb|3S2K|B Chain B, Structural Basis Of Wnt Signaling Inhibition By Dickkopf
Binding To Lrp56
Length = 629
Score = 28.9 bits (63), Expect = 1.1, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 8/57 (14%)
Query: 4 DTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELV------QMIEKIDVNG 54
D++LRR+ + D +G +I ++ S+ L+ +G+ + +N L QMIEKID+ G
Sbjct: 493 DSDLRRI-ESSDLSGANRIVLED-SNILQPVGLTVFENWLYWIDKQQQMIEKIDMTG 547
>pdb|4A0P|A Chain A, Crystal Structure Of Lrp6p3e3p4e4
Length = 628
Score = 28.9 bits (63), Expect = 1.2, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 8/57 (14%)
Query: 4 DTELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELV------QMIEKIDVNG 54
D++LRR+ + D +G +I ++ S+ L+ +G+ + +N L QMIEKID+ G
Sbjct: 495 DSDLRRI-ESSDLSGANRIVLED-SNILQPVGLTVFENWLYWIDKQQQMIEKIDMTG 549
>pdb|3RLZ|A Chain A, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RLZ|B Chain B, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RM1|A Chain A, 1.24 Angstrom X-Ray Structure Of Bovine
Trtk12-Ca(2+)-S100b D63n
Length = 92
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 10 VFQMFD-RNGD-GKITRKELSDSLKN-LGIY---IPDNELV-QMIEKIDVNGDGYVDINE 62
VF + R GD K+ + EL + + N L + I + E+V +++E +D NGDG D E
Sbjct: 14 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQE 73
Query: 63 FGSLYQTI 70
F + I
Sbjct: 74 FMAFVAMI 81
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 95 ITVEELRSVLASLGLKQ------GRTVEDCKLMIKKVDVDGDGMVNYNEF 138
I+V+EL+++L + K G ++E C+ M+ +D DG+G + EF
Sbjct: 550 ISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEF 599
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 83 AFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKL------MIKKVDVDGDGMVNYN 136
AF ++D + D I+ +EL VL + G + D +L I++ D DGD +++
Sbjct: 118 AFRLYDLDKDDKISRDELLQVLR---MMVGVNISDEQLGSIADRTIQEADQDGDSAISFT 174
Query: 137 EFKQMMK 143
EF ++++
Sbjct: 175 EFVKVLE 181
>pdb|1QLS|A Chain A, S100c (S100a11),Or Calgizzarin, In Complex With Annexin I
N-Terminus
Length = 99
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 121 MIKKVDVDGDGMVNYNEFKQMMKGGGFAA 149
M+KK+D+D DG +++ EF ++ G A
Sbjct: 61 MMKKLDLDSDGQLDFQEFLNLIGGLAIAC 89
>pdb|2E4U|A Chain A, Crystal Structure Of The Extracellular Region Of The Group
Ii Metabotropic Glutamate Receptor Complexed With
L-glutamate
pdb|2E4U|B Chain B, Crystal Structure Of The Extracellular Region Of The Group
Ii Metabotropic Glutamate Receptor Complexed With
L-glutamate
pdb|2E4V|A Chain A, Crystal Structure Of The Extracellular Region Of The Group
Ii Metabotropic Glutamate Receptor Complexed With Dcg-Iv
pdb|2E4V|B Chain B, Crystal Structure Of The Extracellular Region Of The Group
Ii Metabotropic Glutamate Receptor Complexed With Dcg-Iv
pdb|2E4W|A Chain A, Crystal Structure Of The Extracellular Region Of The Group
Ii Metabotropic Glutamate Receptor Complexed With
1s,3s-Acpd
pdb|2E4W|B Chain B, Crystal Structure Of The Extracellular Region Of The Group
Ii Metabotropic Glutamate Receptor Complexed With
1s,3s-Acpd
pdb|2E4X|A Chain A, Crystal Structure Of The Extracellular Region Of The Group
Ii Metabotropic Glutamate Receptor Complexed With
1s,3r-Acpd
pdb|2E4X|B Chain B, Crystal Structure Of The Extracellular Region Of The Group
Ii Metabotropic Glutamate Receptor Complexed With
1s,3r-Acpd
pdb|2E4Y|A Chain A, Crystal Structure Of The Extracellular Region Of The Group
Ii Metabotropic Glutamate Receptor Complexed With
2r,4r-Apdc
pdb|2E4Y|B Chain B, Crystal Structure Of The Extracellular Region Of The Group
Ii Metabotropic Glutamate Receptor Complexed With
2r,4r-Apdc
Length = 555
Score = 28.1 bits (61), Expect = 1.8, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 122 IKKVDVDGDGMVNYNEFKQMMKGGGFAALR 151
I K D GDGM YN F GG ++ L+
Sbjct: 429 IVKFDTFGDGMGRYNVFNLQQTGGKYSYLK 458
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 83 AFNVFDQNGDGYITVEELRSVLASLGLKQGRTVEDCKL------MIKKVDVDGDGMVNYN 136
AF ++D + D I+ +EL VL + G + D +L I++ D DGD +++
Sbjct: 118 AFRLYDLDKDEKISRDELLQVLR---MMVGVNISDEQLGSIADRTIQEADQDGDSAISFT 174
Query: 137 EFKQMMK 143
EF ++++
Sbjct: 175 EFVKVLE 181
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 35/53 (66%), Gaps = 8/53 (15%)
Query: 95 ITVEELRSVL----ASLGLKQGRTVEDCKLMIKKVDVDGDGMVNYNEFKQMMK 143
++ EEL+ ++ SL LK RT++D + +++D +GDG V++ EF+ ++K
Sbjct: 26 LSKEELKQLIQAEFPSL-LKGPRTLDD---LFQELDKNGDGEVSFEEFQVLVK 74
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 10/71 (14%)
Query: 3 MDTELRRVFQMFD----RNGDG-KITRKELSDSLKN-----LGIYIPDNELVQMIEKIDV 52
++T + + +F + GD K+++KEL D L+ L + + + ++++++D
Sbjct: 4 LETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDE 63
Query: 53 NGDGYVDINEF 63
NGDG VD EF
Sbjct: 64 NGDGEVDFQEF 74
>pdb|3LCP|C Chain C, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
pdb|3LCP|D Chain D, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
Length = 93
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 12/72 (16%)
Query: 9 RVFQMFDRNGDGKITRKELSDSLKNL--------GIYIPDNELVQMIEKI----DVNGDG 56
F+M D +G+ + ELS ++ ++ + ++EL+ +I+ + D N DG
Sbjct: 22 HYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDG 81
Query: 57 YVDINEFGSLYQ 68
Y+D EF Q
Sbjct: 82 YIDYAEFAKSLQ 93
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 16/75 (21%)
Query: 6 ELRRVFQMF-DRNGDG---------KITRKELSDSLKNLGIYIPDNELVQMIEKIDVNGD 55
EL+ +F+ + D+ GDG + + E LK + L ++ E++D NGD
Sbjct: 6 ELKGIFEKYADKEGDGNQLSKEELKLLLQTEFPSLLKGMST------LDELFEELDKNGD 59
Query: 56 GYVDINEFGSLYQTI 70
G V EF L + I
Sbjct: 60 GEVSFEEFQVLVKKI 74
>pdb|3A4U|B Chain B, Crystal Structure Of Mcfd2 In Complex With Carbohydrate
Recognition Domain Of Ergic-53
Length = 143
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 12/72 (16%)
Query: 9 RVFQMFDRNGDGKITRKELSDSLKNL--------GIYIPDNELVQMIEKI----DVNGDG 56
F+M D +G+ + ELS ++ ++ + ++EL+ +I+ + D N DG
Sbjct: 72 HYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDG 131
Query: 57 YVDINEFGSLYQ 68
Y+D EF Q
Sbjct: 132 YIDYAEFAKSLQ 143
>pdb|2VRG|A Chain A, Structure Of Human Mcfd2
Length = 124
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 12/72 (16%)
Query: 9 RVFQMFDRNGDGKITRKELSDSLKNL--------GIYIPDNELVQMIEKI----DVNGDG 56
F+M D +G+ + ELS ++ ++ + ++EL+ +I+ + D N DG
Sbjct: 53 HYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDG 112
Query: 57 YVDINEFGSLYQ 68
Y+D EF Q
Sbjct: 113 YIDYAEFAKSLQ 124
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 6 ELRRVFQMFDRNGDGKITRKELSDSLKNLGIYIPDNELVQMI 47
EL ++F FD N G +T+ ++ + L G + D E + +
Sbjct: 85 ELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDAL 126
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 22/31 (70%)
Query: 114 TVEDCKLMIKKVDVDGDGMVNYNEFKQMMKG 144
T ED + ++K D + DG ++++EF +MM+G
Sbjct: 3 TEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 33
>pdb|1H5T|A Chain A, Thymidylyltransferase Complexed With
Thymidylyldiphosphate- Glucose
pdb|1H5R|A Chain A, Thymidylyltransferase Complexed With Thimidine And
Glucose- 1-Phospate
pdb|1H5R|C Chain C, Thymidylyltransferase Complexed With Thimidine And
Glucose- 1-Phospate
pdb|1H5R|D Chain D, Thymidylyltransferase Complexed With Thimidine And
Glucose- 1-Phospate
pdb|1H5T|C Chain C, Thymidylyltransferase Complexed With
Thymidylyldiphosphate- Glucose
pdb|1H5T|D Chain D, Thymidylyltransferase Complexed With
Thymidylyldiphosphate- Glucose
pdb|1H5S|C Chain C, Thymidylyltransferase Complexed With Tmp
Length = 293
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 14 FDRNGDGKITRKELSDSLKNL---GIYIPDNELVQMIEKIDVNGDGYVDINEFGSLY 67
FD+NG ++ + N G+Y DN++VQM + + + G ++I + +Y
Sbjct: 151 FDKNGTAISLEEKPLEPKSNYAVTGLYFYDNDVVQMAKNLKPSARGELEITDINRIY 207
>pdb|1H5S|D Chain D, Thymidylyltransferase Complexed With Tmp
Length = 293
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 14 FDRNGDGKITRKELSDSLKNL---GIYIPDNELVQMIEKIDVNGDGYVDINEFGSLY 67
FD+NG ++ + N G+Y DN++VQM + + + G ++I + +Y
Sbjct: 151 FDKNGTAISLEEKPLEPKSNYAVTGLYFYDNDVVQMAKNLKPSARGELEITDINRIY 207
>pdb|1H5R|B Chain B, Thymidylyltransferase Complexed With Thimidine And
Glucose- 1-Phospate
pdb|1H5T|B Chain B, Thymidylyltransferase Complexed With
Thymidylyldiphosphate- Glucose
pdb|1H5S|B Chain B, Thymidylyltransferase Complexed With Tmp
Length = 293
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 14 FDRNGDGKITRKELSDSLKNL---GIYIPDNELVQMIEKIDVNGDGYVDINEFGSLY 67
FD+NG ++ + N G+Y DN++VQM + + + G ++I + +Y
Sbjct: 151 FDKNGTAISLEEKPLEPKSNYAVTGLYFYDNDVVQMAKNLKPSARGELEITDINRIY 207
>pdb|1CFP|A Chain A, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|1CFP|B Chain B, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|3CR2|A Chain A, X-ray Structure Of Bovine Zn(2+),ca(2+)-s100b
pdb|3CR5|X Chain X, X-Ray Structure Of Bovine Pnt-Zn(2+),Ca(2+)-S100b
pdb|3CR4|X Chain X, X-Ray Structure Of Bovine Pnt,Ca(2+)-S100b
pdb|3GK1|A Chain A, X-Ray Structure Of Bovine Sbi132,Ca(2+)-S100b
pdb|3GK2|A Chain A, X-Ray Structure Of Bovine Sbi279,Ca(2+)-S100b
pdb|3GK4|X Chain X, X-Ray Structure Of Bovine Sbi523,Ca(2+)-S100b
pdb|3IQO|A Chain A, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQO|B Chain B, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQQ|A Chain A, X-Ray Structure Of Bovine Trtk12-Ca(2+)-S100b
pdb|3LLE|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
pdb|3LLE|B Chain B, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 92
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 10 VFQMFD-RNGD-GKITRKELSDSLKN-LGIY---IPDNELV-QMIEKIDVNGDGYVDINE 62
VF + R GD K+ + EL + + N L + I + E+V +++E +D +GDG D E
Sbjct: 14 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQE 73
Query: 63 FGSLYQTI 70
F + I
Sbjct: 74 FMAFVAMI 81
>pdb|3LK0|A Chain A, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|B Chain B, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|C Chain C, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|D Chain D, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK1|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 90
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 10 VFQMFD-RNGD-GKITRKELSDSLKN-LGIY---IPDNELV-QMIEKIDVNGDGYVDINE 62
VF + R GD K+ + EL + + N L + I + E+V +++E +D +GDG D E
Sbjct: 14 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQE 73
Query: 63 FGSLYQTI 70
F + I
Sbjct: 74 FMAFVAMI 81
>pdb|4FQO|A Chain A, Crystal Structure Of Calcium-loaded S100b Bound To
Sbi4211
Length = 89
Score = 26.9 bits (58), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 10 VFQMFD-RNGD-GKITRKELSDSLKN-LGIY---IPDNELV-QMIEKIDVNGDGYVDINE 62
VF + R GD K+ + EL + + N L + I + E+V +++E +D +GDG D E
Sbjct: 14 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQE 73
Query: 63 FGSLYQTI 70
F + I
Sbjct: 74 FMAFVAMI 81
>pdb|1MHO|A Chain A, The 2.0 A Structure Of Holo S100b From Bovine Brain
Length = 88
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 10 VFQMFD-RNGD-GKITRKELSDSLKN-LGIY---IPDNELV-QMIEKIDVNGDGYVDINE 62
VF + R GD K+ + EL + + N L + I + E+V +++E +D +GDG D E
Sbjct: 13 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQE 72
Query: 63 FGSLYQTI 70
F + I
Sbjct: 73 FMAFVAMI 80
>pdb|1E8A|A Chain A, The Three-Dimensional Structure Of Human S100a12
pdb|1E8A|B Chain B, The Three-Dimensional Structure Of Human S100a12
pdb|1GQM|A Chain A, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|B Chain B, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|C Chain C, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|D Chain D, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|E Chain E, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|F Chain F, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|G Chain G, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|H Chain H, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|I Chain I, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|J Chain J, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|K Chain K, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|L Chain L, The Structure Of S100a12 In A Hexameric Form
Length = 91
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Query: 14 FDRNGDGKITR---KELSDSLKNLGIYIPDNELV-QMIEKIDVNGDGYVDINEFGSL 66
FD G++ + KEL++++KN I D ++ ++ + +D N D VD EF SL
Sbjct: 24 FDTLSKGELKQLLTKELANTIKN----IKDKAVIDEIFQGLDANQDEQVDFQEFISL 76
>pdb|1PSB|A Chain A, Solution Structure Of Calcium Loaded S100b Complexed To
A Peptide From N-Terminal Regulatory Domain Of Ndr
Kinase.
pdb|1PSB|B Chain B, Solution Structure Of Calcium Loaded S100b Complexed To
A Peptide From N-Terminal Regulatory Domain Of Ndr
Kinase
Length = 91
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 10 VFQMFD-RNGD-GKITRKELSDSLKN-LGIY---IPDNELV-QMIEKIDVNGDGYVDINE 62
VF + R GD K+ + EL + + N L + I + E+V +++E +D +GDG D E
Sbjct: 13 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQE 72
Query: 63 FGSLYQTI 70
F + I
Sbjct: 73 FMAFVAMI 80
>pdb|1ODB|A Chain A, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|B Chain B, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|C Chain C, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|D Chain D, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|E Chain E, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|F Chain F, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|2WC8|A Chain A, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|B Chain B, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|C Chain C, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|D Chain D, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCB|A Chain A, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCB|B Chain B, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCF|A Chain A, Calcium-Free (Apo) S100a12
pdb|2WCF|B Chain B, Calcium-Free (Apo) S100a12
pdb|2WCF|C Chain C, Calcium-Free (Apo) S100a12
pdb|2WCF|D Chain D, Calcium-Free (Apo) S100a12
pdb|2WCF|E Chain E, Calcium-Free (Apo) S100a12
pdb|2WCF|F Chain F, Calcium-Free (Apo) S100a12
Length = 95
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Query: 14 FDRNGDGKITR---KELSDSLKNLGIYIPDNELV-QMIEKIDVNGDGYVDINEFGSL 66
FD G++ + KEL++++KN I D ++ ++ + +D N D VD EF SL
Sbjct: 28 FDTLSKGELKQLLTKELANTIKN----IKDKAVIDEIFQGLDANQDEQVDFQEFISL 80
>pdb|1NSH|A Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
Length = 101
Score = 26.6 bits (57), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 43 LVQMIEKIDVNGDGYVDINEFGSL 66
L +M++K+D+N DG +D EF +L
Sbjct: 56 LDRMMKKLDLNSDGQLDFQEFLNL 79
Score = 26.2 bits (56), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 121 MIKKVDVDGDGMVNYNEFKQMMKGGGFAA 149
M+KK+D++ DG +++ EF ++ G A
Sbjct: 59 MMKKLDLNSDGQLDFQEFLNLIGGLAVAC 87
>pdb|1SYM|A Chain A, 3-D Solution Structure Of Reduced Apo-S100b From Rat,
Nmr, 20 Structures
pdb|1SYM|B Chain B, 3-D Solution Structure Of Reduced Apo-S100b From Rat,
Nmr, 20 Structures
pdb|1QLK|A Chain A, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1QLK|B Chain B, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1B4C|A Chain A, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1B4C|B Chain B, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1DT7|A Chain A, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1DT7|B Chain B, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1MWN|A Chain A, Solution Nmr Structure Of S100b Bound To The
High-Affinity Target Peptide Trtk-12
pdb|1MWN|B Chain B, Solution Nmr Structure Of S100b Bound To The
High-Affinity Target Peptide Trtk-12
pdb|1XYD|A Chain A, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
pdb|1XYD|B Chain B, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
Length = 92
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 7/61 (11%)
Query: 10 VFQMFD-RNGD-GKITRKELSDSLKN-LGIY---IPDNELV-QMIEKIDVNGDGYVDINE 62
VF + R GD K+ + EL + + N L + I + E+V +++E +D +GDG D E
Sbjct: 14 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDEDGDGECDFQE 73
Query: 63 F 63
F
Sbjct: 74 F 74
>pdb|2K7O|A Chain A, Ca2+-s100b, Refined With Rdcs
pdb|2K7O|B Chain B, Ca2+-s100b, Refined With Rdcs
Length = 91
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 7/61 (11%)
Query: 10 VFQMFD-RNGD-GKITRKELSDSLKN-LGIY---IPDNELV-QMIEKIDVNGDGYVDINE 62
VF + R GD K+ + EL + + N L + I + E+V +++E +D +GDG D E
Sbjct: 13 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDEDGDGECDFQE 72
Query: 63 F 63
F
Sbjct: 73 F 73
>pdb|3SM9|A Chain A, Crystal Structure Of Metabotropic Glutamate Receptor 3
Precursor In Presence Of Ly341495 Antagonist
Length = 479
Score = 26.2 bits (56), Expect = 8.4, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 122 IKKVDVDGDGMVNYNEFKQMMKGGGFAALR 151
I K D GDGM YN F GG ++ L+
Sbjct: 428 IVKFDTFGDGMGRYNVFNFQNVGGKYSYLK 457
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 25.8 bits (55), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 43 LVQMIEKIDVNGDGYVDINEFGSLYQTI 70
L ++ E++D NGDG V EF L + I
Sbjct: 50 LDELFEELDKNGDGEVSFEEFQVLVKKI 77
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By
X- Ray Crystallography
Length = 76
Score = 25.8 bits (55), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 43 LVQMIEKIDVNGDGYVDINEFGSLYQTI 70
L ++ E++D NGDG V EF L + I
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKKI 74
>pdb|2ZUO|A Chain A, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|B Chain B, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|C Chain C, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|D Chain D, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|E Chain E, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|F Chain F, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|G Chain G, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|H Chain H, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|I Chain I, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|J Chain J, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|K Chain K, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|L Chain L, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|M Chain M, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|N Chain N, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|O Chain O, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|P Chain P, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|Q Chain Q, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|R Chain R, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|S Chain S, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|T Chain T, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|U Chain U, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|V Chain V, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|W Chain W, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|X Chain X, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|Y Chain Y, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|Z Chain Z, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|AA Chain a, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|BB Chain b, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|CC Chain c, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|DD Chain d, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|EE Chain e, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|FF Chain f, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|GG Chain g, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|HH Chain h, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|II Chain i, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|JJ Chain j, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|KK Chain k, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|LL Chain l, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|MM Chain m, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
Length = 861
Score = 25.8 bits (55), Expect = 10.0, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNLGIYIP 39
LR + FDR G G++T +E ++++G Y+P
Sbjct: 176 LRARKECFDREGKGRVTGEEW--LVRSVGAYLP 206
>pdb|2QZV|A Chain A, Draft Crystal Structure Of The Vault Shell At 9 Angstroms
Resolution
pdb|2QZV|B Chain B, Draft Crystal Structure Of The Vault Shell At 9 Angstroms
Resolution
Length = 873
Score = 25.8 bits (55), Expect = 10.0, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 7 LRRVFQMFDRNGDGKITRKELSDSLKNLGIYIP 39
LR + FDR G G++T +E ++++G Y+P
Sbjct: 188 LRARKECFDREGKGRVTGEEW--LVRSVGAYLP 218
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.141 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,374,224
Number of Sequences: 62578
Number of extensions: 176224
Number of successful extensions: 2032
Number of sequences better than 100.0: 396
Number of HSP's better than 100.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 578
Number of HSP's gapped (non-prelim): 886
length of query: 151
length of database: 14,973,337
effective HSP length: 90
effective length of query: 61
effective length of database: 9,341,317
effective search space: 569820337
effective search space used: 569820337
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.7 bits)