Query 037201
Match_columns 177
No_of_seqs 31 out of 33
Neff 3.4
Searched_HMMs 29240
Date Mon Mar 25 16:29:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037201.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037201hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qip_A Protein of unknown func 98.3 8.1E-07 2.8E-11 68.8 5.9 53 122-174 108-163 (165)
2 1paa_A Yeast transcription fac 96.7 0.00033 1.1E-08 37.2 0.4 27 47-73 3-29 (30)
3 3iuf_A Zinc finger protein UBI 96.5 0.00058 2E-08 41.7 0.6 33 44-76 5-37 (48)
4 2elr_A Zinc finger protein 406 96.5 0.00077 2.6E-08 37.4 1.0 29 44-73 7-35 (36)
5 2epx_A Zinc finger protein 28 96.4 0.00071 2.4E-08 39.8 0.6 31 44-74 10-40 (47)
6 2m0d_A Zinc finger and BTB dom 96.4 0.00061 2.1E-08 35.7 0.1 28 45-73 2-29 (30)
7 2eov_A Zinc finger protein 484 96.2 0.0019 6.5E-08 37.9 1.8 29 44-73 10-38 (46)
8 1rim_A E6APC2 peptide; E6-bind 96.2 0.0018 6E-08 36.2 1.3 28 46-74 2-29 (33)
9 2lvr_A Zinc finger and BTB dom 95.1 0.00086 2.9E-08 35.4 0.0 28 45-73 2-29 (30)
10 1srk_A Zinc finger protein ZFP 96.1 0.0012 4E-08 36.6 0.3 29 44-73 5-33 (35)
11 2elq_A Zinc finger protein 406 96.1 0.0012 4E-08 36.9 0.3 29 44-73 7-35 (36)
12 2eps_A POZ-, at HOOK-, and zin 96.0 0.001 3.5E-08 41.1 -0.0 31 44-74 10-40 (54)
13 1p7a_A BF3, BKLF, kruppel-like 96.0 0.0023 7.8E-08 35.8 1.4 27 44-71 9-35 (37)
14 1ard_A Yeast transcription fac 96.0 0.002 6.7E-08 33.7 1.1 27 46-73 2-28 (29)
15 2elt_A Zinc finger protein 406 96.0 0.0012 4.3E-08 36.5 0.3 29 44-73 7-35 (36)
16 2ytt_A Zinc finger protein 473 96.0 0.0023 7.8E-08 37.8 1.3 30 44-74 10-39 (46)
17 2yto_A Zinc finger protein 484 95.9 0.0022 7.6E-08 37.8 1.2 30 44-74 10-39 (46)
18 2enf_A Zinc finger protein 347 95.9 0.0018 6.3E-08 38.1 0.8 30 44-74 10-39 (46)
19 2eom_A ZFP-95, zinc finger pro 95.9 0.0019 6.6E-08 38.2 0.8 30 44-74 10-39 (46)
20 2en9_A Zinc finger protein 28 95.9 0.0023 8E-08 37.7 1.2 30 44-74 10-39 (46)
21 2els_A Zinc finger protein 406 95.9 0.0015 5.3E-08 36.4 0.3 29 44-73 7-35 (36)
22 2eou_A Zinc finger protein 473 95.9 0.0026 9.1E-08 37.2 1.3 30 44-74 10-39 (44)
23 2ep3_A Zinc finger protein 484 95.9 0.0025 8.5E-08 37.5 1.1 30 44-74 10-39 (46)
24 2emz_A ZFP-95, zinc finger pro 95.9 0.0032 1.1E-07 37.1 1.6 30 44-74 10-39 (46)
25 2ytr_A Zinc finger protein 347 95.9 0.0025 8.6E-08 37.4 1.1 30 44-74 10-39 (46)
26 2lvt_A Zinc finger and BTB dom 94.9 0.0014 4.7E-08 34.7 0.0 27 46-73 2-28 (29)
27 2ema_A Zinc finger protein 347 95.9 0.0027 9.2E-08 37.3 1.3 30 44-74 10-39 (46)
28 2emg_A Zinc finger protein 484 95.9 0.0019 6.7E-08 38.0 0.6 29 44-73 10-38 (46)
29 2yti_A Zinc finger protein 347 95.9 0.002 6.8E-08 37.9 0.7 30 44-74 10-39 (46)
30 2ytn_A Zinc finger protein 347 95.9 0.0021 7.3E-08 37.8 0.8 30 44-74 10-39 (46)
31 2yth_A Zinc finger protein 224 95.8 0.0025 8.5E-08 37.6 1.0 30 44-74 10-39 (46)
32 2emi_A Zinc finger protein 484 95.8 0.0016 5.4E-08 38.4 0.2 29 44-73 10-38 (46)
33 2emk_A Zinc finger protein 28 95.8 0.0037 1.3E-07 36.8 1.8 30 44-74 10-39 (46)
34 2elx_A Zinc finger protein 406 95.8 0.0019 6.6E-08 35.4 0.4 29 44-73 5-33 (35)
35 1rik_A E6APC1 peptide; E6-bind 95.8 0.0017 5.8E-08 34.1 0.2 26 47-73 3-28 (29)
36 2eq0_A Zinc finger protein 347 95.8 0.0025 8.4E-08 37.5 0.9 30 44-74 10-39 (46)
37 2elv_A Zinc finger protein 406 95.8 0.0016 5.6E-08 36.3 0.1 29 44-73 7-35 (36)
38 2elp_A Zinc finger protein 406 95.8 0.002 6.9E-08 36.1 0.5 29 44-73 7-36 (37)
39 2en3_A ZFP-95, zinc finger pro 95.8 0.0021 7.3E-08 37.8 0.6 30 44-74 10-39 (46)
40 2em7_A Zinc finger protein 224 95.8 0.0018 6.2E-08 38.1 0.3 30 44-74 10-39 (46)
41 2lv2_A Insulinoma-associated p 95.8 0.0017 5.9E-08 45.7 0.2 30 45-74 55-84 (85)
42 2elo_A Zinc finger protein 406 95.8 0.0018 6E-08 36.2 0.2 29 44-73 7-35 (37)
43 2eoh_A Zinc finger protein 28 95.8 0.0022 7.5E-08 37.9 0.6 30 44-74 10-39 (46)
44 1njq_A Superman protein; zinc- 95.8 0.0018 6.1E-08 37.0 0.2 30 44-74 4-33 (39)
45 2enh_A Zinc finger protein 28 95.8 0.0022 7.6E-08 37.8 0.6 30 44-74 10-39 (46)
46 1znf_A 31ST zinc finger from X 95.8 0.0034 1.2E-07 32.4 1.3 24 47-71 2-25 (27)
47 2epv_A Zinc finger protein 268 95.8 0.0018 6.3E-08 38.0 0.2 30 44-74 10-39 (44)
48 2eq1_A Zinc finger protein 347 95.8 0.0021 7.3E-08 37.8 0.5 30 44-74 10-39 (46)
49 2eoz_A Zinc finger protein 473 95.8 0.0016 5.4E-08 38.5 -0.1 30 44-74 10-39 (46)
50 2yu8_A Zinc finger protein 347 95.7 0.0028 9.7E-08 37.2 1.1 30 44-74 10-39 (46)
51 2epu_A Zinc finger protein 32; 95.7 0.0013 4.6E-08 38.7 -0.4 30 44-74 10-39 (45)
52 2en2_A B-cell lymphoma 6 prote 95.7 0.002 6.8E-08 37.1 0.3 30 44-74 9-38 (42)
53 2yte_A Zinc finger protein 473 95.7 0.0027 9.3E-08 36.4 0.9 29 44-73 8-36 (42)
54 2eoq_A Zinc finger protein 224 95.7 0.0026 8.9E-08 37.4 0.9 30 44-74 10-39 (46)
55 2em6_A Zinc finger protein 224 95.7 0.0022 7.4E-08 37.9 0.5 30 44-74 10-39 (46)
56 2elm_A Zinc finger protein 406 95.7 0.0017 5.8E-08 36.9 0.0 29 44-72 7-35 (37)
57 2emp_A Zinc finger protein 347 95.7 0.0035 1.2E-07 36.8 1.4 30 44-74 10-39 (46)
58 2eoo_A ZFP-95, zinc finger pro 95.7 0.0025 8.5E-08 37.6 0.7 30 44-74 10-39 (46)
59 2en7_A Zinc finger protein 268 95.7 0.0026 8.8E-08 36.8 0.8 30 44-74 10-39 (44)
60 2eor_A Zinc finger protein 224 95.7 0.0024 8.1E-08 37.5 0.6 30 44-74 10-39 (46)
61 2eml_A Zinc finger protein 28 95.7 0.0033 1.1E-07 37.0 1.2 30 44-74 10-39 (46)
62 2elz_A Zinc finger protein 224 95.7 0.003 1E-07 37.3 0.9 29 44-73 10-38 (46)
63 2epz_A Zinc finger protein 28 95.7 0.0029 9.8E-08 37.2 0.8 30 44-74 10-39 (46)
64 1zfd_A SWI5; DNA binding motif 95.6 0.0032 1.1E-07 34.0 1.0 28 45-73 2-31 (32)
65 2kvh_A Zinc finger and BTB dom 95.6 0.0031 1.1E-07 33.0 0.8 23 45-67 2-24 (27)
66 2ep1_A Zinc finger protein 484 95.6 0.003 1E-07 37.0 0.8 30 44-74 10-39 (46)
67 2en8_A Zinc finger protein 224 95.6 0.0034 1.2E-07 36.8 1.0 30 44-74 10-39 (46)
68 2m0e_A Zinc finger and BTB dom 95.6 0.0036 1.2E-07 32.4 1.0 26 47-73 3-28 (29)
69 2em4_A Zinc finger protein 28 95.6 0.0024 8.1E-08 37.7 0.3 30 44-74 10-39 (46)
70 2emj_A Zinc finger protein 28 95.6 0.0026 9E-08 37.5 0.5 30 44-74 10-39 (46)
71 2el6_A Zinc finger protein 268 95.6 0.0023 8E-08 37.7 0.2 30 44-74 10-39 (46)
72 2yrm_A B-cell lymphoma 6 prote 95.6 0.0041 1.4E-07 36.4 1.3 30 44-74 8-37 (43)
73 2emh_A Zinc finger protein 484 95.6 0.003 1E-07 37.1 0.7 30 44-74 10-39 (46)
74 2m0f_A Zinc finger and BTB dom 95.6 0.0044 1.5E-07 32.1 1.3 26 47-73 3-28 (29)
75 2eon_A ZFP-95, zinc finger pro 95.6 0.0025 8.5E-08 37.8 0.3 30 44-74 10-39 (46)
76 2eq2_A Zinc finger protein 347 95.6 0.0031 1E-07 37.1 0.7 30 44-74 10-39 (46)
77 2ept_A Zinc finger protein 32; 95.5 0.0019 6.6E-08 37.1 -0.3 29 44-73 8-36 (41)
78 2em9_A Zinc finger protein 224 95.5 0.0025 8.4E-08 37.4 0.2 30 44-74 10-39 (46)
79 2eow_A Zinc finger protein 347 95.5 0.0027 9.4E-08 37.2 0.3 30 44-74 10-39 (46)
80 2ytm_A Zinc finger protein 28 95.5 0.0045 1.5E-07 36.6 1.3 30 44-74 10-39 (46)
81 2epc_A Zinc finger protein 32; 95.5 0.0026 8.8E-08 36.5 0.2 29 44-73 9-37 (42)
82 2enc_A Zinc finger protein 224 95.5 0.0023 7.8E-08 37.7 -0.0 30 44-74 10-39 (46)
83 2lvu_A Zinc finger and BTB dom 94.5 0.0024 8.2E-08 33.1 0.0 22 46-67 2-23 (26)
84 2eq4_A Zinc finger protein 224 95.5 0.0035 1.2E-07 36.7 0.7 29 44-73 10-38 (46)
85 2d9h_A Zinc finger protein 692 95.5 0.0035 1.2E-07 40.6 0.8 31 44-74 36-66 (78)
86 1yui_A GAGA-factor; complex (D 95.5 0.0037 1.3E-07 38.4 0.9 30 44-74 22-51 (54)
87 2ytq_A Zinc finger protein 268 95.5 0.003 1E-07 37.3 0.4 30 44-74 10-39 (46)
88 2eoj_A Zinc finger protein 268 95.5 0.0022 7.5E-08 37.3 -0.2 29 44-73 10-38 (44)
89 2eop_A Zinc finger protein 268 95.4 0.0041 1.4E-07 36.4 0.9 30 44-74 10-39 (46)
90 2emm_A ZFP-95, zinc finger pro 95.4 0.0027 9.2E-08 37.2 0.1 30 44-74 10-39 (46)
91 2adr_A ADR1; transcription reg 95.4 0.0024 8.4E-08 39.3 -0.1 29 45-73 29-57 (60)
92 2ep0_A Zinc finger protein 28 95.4 0.0024 8.1E-08 37.6 -0.1 30 44-74 10-39 (46)
93 2el5_A Zinc finger protein 268 95.4 0.0028 9.4E-08 36.5 0.1 29 44-73 8-36 (42)
94 4gzn_C ZFP-57, zinc finger pro 95.4 0.0036 1.2E-07 41.4 0.7 29 44-73 30-58 (60)
95 2ely_A Zinc finger protein 224 95.4 0.0039 1.3E-07 36.8 0.8 30 44-74 10-39 (46)
96 2ytk_A Zinc finger protein 347 95.4 0.0031 1.1E-07 37.1 0.3 30 44-74 10-39 (46)
97 2emx_A Zinc finger protein 268 95.4 0.0032 1.1E-07 36.7 0.3 30 44-74 8-37 (44)
98 2ytp_A Zinc finger protein 484 95.4 0.0024 8.1E-08 37.7 -0.2 29 44-73 10-38 (46)
99 2ytd_A Zinc finger protein 473 95.4 0.0031 1E-07 37.1 0.3 30 44-74 10-39 (46)
100 2yu5_A Zinc finger protein 473 95.4 0.0025 8.5E-08 37.2 -0.2 29 44-73 10-38 (44)
101 2em5_A ZFP-95, zinc finger pro 95.4 0.0026 8.8E-08 37.6 -0.1 30 44-74 10-39 (46)
102 2eos_A B-cell lymphoma 6 prote 95.3 0.0029 1E-07 36.5 0.1 29 44-73 9-37 (42)
103 2yts_A Zinc finger protein 484 95.3 0.0028 9.5E-08 37.2 -0.1 30 44-74 10-39 (46)
104 2emy_A Zinc finger protein 268 95.3 0.0037 1.3E-07 36.7 0.5 29 44-73 10-38 (46)
105 2ytj_A Zinc finger protein 484 95.3 0.0032 1.1E-07 37.0 0.1 30 44-74 10-39 (46)
106 2yrj_A Zinc finger protein 473 95.3 0.0028 9.7E-08 37.1 -0.2 30 44-74 10-39 (46)
107 2ene_A Zinc finger protein 347 95.2 0.0029 9.9E-08 37.2 -0.2 29 44-73 10-38 (46)
108 2em8_A Zinc finger protein 224 95.2 0.0039 1.3E-07 36.7 0.4 30 44-74 10-39 (46)
109 2em0_A Zinc finger protein 224 95.2 0.0045 1.5E-07 36.4 0.6 30 44-74 10-39 (46)
110 2em2_A Zinc finger protein 28 95.2 0.0036 1.2E-07 36.9 0.1 30 44-74 10-39 (46)
111 2ep2_A Zinc finger protein 484 95.2 0.0035 1.2E-07 36.8 0.0 30 44-74 10-39 (46)
112 2emf_A Zinc finger protein 484 95.2 0.0033 1.1E-07 37.1 -0.1 29 44-73 10-38 (46)
113 2ytb_A Zinc finger protein 32; 95.1 0.0037 1.2E-07 35.8 0.0 29 44-73 9-37 (42)
114 2ytf_A Zinc finger protein 268 95.1 0.0034 1.2E-07 36.7 -0.1 30 44-74 10-39 (46)
115 2em3_A Zinc finger protein 28 95.1 0.0039 1.3E-07 36.6 0.1 29 44-73 10-38 (46)
116 2kvf_A Zinc finger and BTB dom 95.1 0.0044 1.5E-07 32.4 0.3 23 45-67 2-24 (28)
117 2yso_A ZFP-95, zinc finger pro 95.1 0.0044 1.5E-07 36.4 0.3 29 44-73 10-38 (46)
118 2emb_A Zinc finger protein 473 95.1 0.0038 1.3E-07 36.3 0.1 29 44-73 10-38 (44)
119 2eoe_A Zinc finger protein 347 95.1 0.0042 1.4E-07 36.4 0.2 30 44-74 10-39 (46)
120 2eof_A Zinc finger protein 268 95.1 0.0052 1.8E-07 35.5 0.6 29 44-73 10-38 (44)
121 2eme_A Zinc finger protein 473 95.1 0.004 1.4E-07 36.4 0.2 30 44-74 10-39 (46)
122 4gzn_C ZFP-57, zinc finger pro 95.1 0.0045 1.5E-07 40.9 0.3 30 44-74 2-31 (60)
123 2kvg_A Zinc finger and BTB dom 95.0 0.0045 1.5E-07 32.7 0.2 23 45-67 2-24 (27)
124 2epw_A Zinc finger protein 268 95.0 0.0041 1.4E-07 36.4 -0.1 29 44-73 10-38 (46)
125 2eoy_A Zinc finger protein 473 94.9 0.0039 1.3E-07 36.8 -0.2 28 44-72 10-37 (46)
126 2eq3_A Zinc finger protein 347 94.9 0.0039 1.3E-07 36.5 -0.3 29 44-73 10-38 (46)
127 2el4_A Zinc finger protein 268 94.9 0.0042 1.5E-07 36.3 -0.1 30 44-74 10-39 (46)
128 2ytg_A ZFP-95, zinc finger pro 94.9 0.0037 1.3E-07 36.7 -0.4 29 44-73 10-38 (46)
129 2en6_A Zinc finger protein 268 94.8 0.005 1.7E-07 36.1 -0.0 29 44-73 10-38 (46)
130 2ysp_A Zinc finger protein 224 94.8 0.0037 1.3E-07 36.7 -0.6 29 44-73 10-38 (46)
131 3etn_A Putative phosphosugar i 94.8 0.09 3.1E-06 41.7 7.2 82 88-169 41-158 (220)
132 2ct1_A Transcriptional repress 94.8 0.0068 2.3E-07 39.3 0.6 28 45-72 14-41 (77)
133 2eox_A Zinc finger protein 473 94.7 0.0036 1.2E-07 36.4 -0.8 29 44-73 10-38 (44)
134 2yt9_A Zinc finger-containing 94.7 0.0085 2.9E-07 39.6 0.9 29 45-73 64-92 (95)
135 3sho_A Transcriptional regulat 94.6 0.06 2.1E-06 40.4 5.6 82 88-169 26-137 (187)
136 2en1_A Zinc finger protein 224 94.6 0.0054 1.8E-07 36.0 -0.2 29 44-73 10-38 (46)
137 2epq_A POZ-, at HOOK-, and zin 94.5 0.0072 2.5E-07 35.4 0.2 30 44-74 8-37 (45)
138 3uk3_C Zinc finger protein 217 94.5 0.013 4.5E-07 35.4 1.4 24 47-70 33-56 (57)
139 2epr_A POZ-, at HOOK-, and zin 94.5 0.0052 1.8E-07 36.7 -0.5 29 44-73 10-38 (48)
140 1wjp_A Zinc finger protein 295 94.5 0.01 3.6E-07 40.5 1.0 29 45-73 68-96 (107)
141 1sp2_A SP1F2; zinc finger, tra 94.5 0.0085 2.9E-07 32.2 0.4 26 47-73 3-30 (31)
142 2drp_A Protein (tramtrack DNA- 94.4 0.011 3.8E-07 36.9 0.9 26 45-70 39-64 (66)
143 1va1_A Transcription factor SP 94.4 0.01 3.5E-07 33.6 0.6 29 44-73 6-36 (37)
144 2eln_A Zinc finger protein 406 94.3 0.0082 2.8E-07 36.5 0.1 29 44-73 7-37 (38)
145 3uk3_C Zinc finger protein 217 94.2 0.012 4.1E-07 35.6 0.8 25 45-69 3-27 (57)
146 2epp_A POZ-, at HOOK-, and zin 94.1 0.016 5.3E-07 39.4 1.3 32 41-73 8-39 (66)
147 1x3c_A Zinc finger protein 292 94.1 0.013 4.4E-07 42.1 0.8 32 44-75 25-58 (73)
148 2kfq_A FP1; protein, de novo p 94.1 0.0016 5.6E-08 36.0 -3.2 27 47-74 3-29 (32)
149 1klr_A Zinc finger Y-chromosom 94.1 0.028 9.5E-07 29.0 1.9 25 47-72 3-27 (30)
150 2dlq_A GLI-kruppel family memb 94.0 0.011 3.6E-07 40.6 0.3 27 47-73 95-121 (124)
151 1a1h_A QGSR zinc finger peptid 93.9 0.016 5.4E-07 37.8 0.9 26 47-73 63-88 (90)
152 3mjh_B Early endosome antigen 93.8 0.017 5.8E-07 36.0 0.9 28 46-73 5-32 (34)
153 1bhi_A CRE-BP1, ATF-2; CRE bin 93.7 0.019 6.5E-07 32.1 0.9 30 44-74 4-35 (38)
154 2ct1_A Transcriptional repress 93.7 0.012 4.1E-07 38.0 0.0 29 45-73 44-72 (77)
155 2drp_A Protein (tramtrack DNA- 93.6 0.022 7.6E-07 35.5 1.2 28 44-71 8-35 (66)
156 1jeo_A MJ1247, hypothetical pr 93.4 0.15 5.2E-06 38.1 5.7 80 88-168 27-130 (180)
157 1m3s_A Hypothetical protein YC 93.4 0.13 4.4E-06 38.7 5.3 81 88-168 24-128 (186)
158 2lce_A B-cell lymphoma 6 prote 93.4 0.017 5.7E-07 37.1 0.3 18 49-66 48-65 (74)
159 2xhz_A KDSD, YRBH, arabinose 5 93.3 0.13 4.4E-06 38.5 5.2 80 90-169 37-146 (183)
160 1x5w_A Zinc finger protein 64, 93.3 0.015 5.2E-07 36.9 0.1 23 46-68 37-59 (70)
161 1fv5_A First zinc finger of U- 93.3 0.019 6.4E-07 34.8 0.4 24 43-66 5-28 (36)
162 2gqj_A Zinc finger protein KIA 93.2 0.039 1.4E-06 37.7 2.0 27 44-70 52-78 (98)
163 2ctd_A Zinc finger protein 512 93.1 0.026 8.8E-07 39.4 1.0 28 44-73 32-60 (96)
164 1vim_A Hypothetical protein AF 93.1 0.13 4.6E-06 39.8 5.2 82 88-169 34-139 (200)
165 2adr_A ADR1; transcription reg 93.0 0.03 1E-06 34.2 1.1 27 46-73 2-28 (60)
166 1zr9_A Zinc finger protein 593 92.9 0.033 1.1E-06 43.1 1.5 36 43-78 47-82 (124)
167 1tk9_A Phosphoheptose isomeras 92.9 0.09 3.1E-06 39.4 3.7 46 123-168 111-159 (188)
168 2xbl_A Phosphoheptose isomeras 92.7 0.15 5.3E-06 38.4 4.9 45 124-168 118-165 (198)
169 2lce_A B-cell lymphoma 6 prote 92.6 0.025 8.6E-07 36.2 0.4 30 43-73 14-43 (74)
170 2dmi_A Teashirt homolog 3; zin 92.6 0.042 1.4E-06 37.7 1.5 30 44-73 78-107 (115)
171 1ncs_A Peptide M30F, transcrip 92.5 0.026 8.9E-07 33.8 0.3 29 44-73 16-46 (47)
172 2ee8_A Protein ODD-skipped-rel 92.4 0.039 1.3E-06 37.2 1.1 26 47-73 74-99 (106)
173 2cot_A Zinc finger protein 435 92.3 0.023 7.8E-07 36.7 -0.2 19 48-66 48-66 (77)
174 1x5w_A Zinc finger protein 64, 92.2 0.044 1.5E-06 34.7 1.1 25 44-68 7-31 (70)
175 1x6e_A Zinc finger protein 24; 92.1 0.039 1.3E-06 35.3 0.7 21 47-67 43-63 (72)
176 2i2w_A Phosphoheptose isomeras 91.9 0.17 5.6E-06 39.5 4.3 46 124-169 133-181 (212)
177 2gqj_A Zinc finger protein KIA 91.9 0.087 3E-06 36.0 2.4 28 44-72 22-50 (98)
178 1x6h_A Transcriptional repress 91.8 0.046 1.6E-06 35.2 0.8 29 44-72 13-41 (86)
179 1x6e_A Zinc finger protein 24; 91.7 0.04 1.4E-06 35.2 0.5 29 44-73 12-40 (72)
180 2ghf_A ZHX1, zinc fingers and 91.7 0.029 9.9E-07 40.5 -0.3 26 45-70 17-42 (102)
181 1llm_C Chimera of ZIF23-GCN4; 91.6 0.044 1.5E-06 36.2 0.6 27 45-71 30-56 (88)
182 3fxa_A SIS domain protein; str 91.4 0.39 1.3E-05 36.6 5.9 82 88-169 31-142 (201)
183 2ej4_A Zinc finger protein ZIC 91.2 0.083 2.8E-06 34.8 1.6 26 47-73 63-88 (95)
184 1bbo_A Human enhancer-binding 91.1 0.079 2.7E-06 31.8 1.4 25 47-72 2-26 (57)
185 1f2i_G Fusion of N-terminal 17 91.0 0.053 1.8E-06 34.3 0.5 23 45-67 48-70 (73)
186 1x92_A APC5045, phosphoheptose 90.9 0.29 9.9E-06 37.2 4.6 46 124-169 115-166 (199)
187 2lt7_A Transcriptional regulat 90.9 0.05 1.7E-06 40.2 0.3 28 45-73 21-48 (133)
188 2ent_A Krueppel-like factor 15 90.7 0.038 1.3E-06 32.3 -0.4 29 44-73 10-40 (48)
189 2cot_A Zinc finger protein 435 90.7 0.046 1.6E-06 35.2 -0.0 30 43-73 15-44 (77)
190 2dlk_A Novel protein; ZF-C2H2 90.5 0.065 2.2E-06 34.2 0.5 28 45-73 37-66 (79)
191 3trj_A Phosphoheptose isomeras 90.4 0.31 1.1E-05 38.2 4.5 46 123-168 115-166 (201)
192 2lt7_A Transcriptional regulat 90.3 0.061 2.1E-06 39.8 0.3 28 45-72 77-104 (133)
193 2yva_A DNAA initiator-associat 90.1 0.37 1.3E-05 36.4 4.6 46 124-169 111-162 (196)
194 1x6f_A Zinc finger protein 462 90.1 0.1 3.5E-06 36.3 1.4 32 44-76 23-54 (88)
195 2ghf_A ZHX1, zinc fingers and 90.1 0.052 1.8E-06 39.2 -0.2 31 44-74 48-78 (102)
196 1bbo_A Human enhancer-binding 90.1 0.065 2.2E-06 32.2 0.3 28 45-73 28-55 (57)
197 2csh_A Zinc finger protein 297 90.1 0.13 4.3E-06 34.9 1.8 26 47-72 66-91 (110)
198 2ebt_A Krueppel-like factor 5; 90.0 0.11 3.9E-06 34.2 1.5 25 45-70 74-98 (100)
199 2ej4_A Zinc finger protein ZIC 89.9 0.11 3.9E-06 34.1 1.4 28 47-74 26-53 (95)
200 2wbt_A B-129; zinc finger; 2.7 89.8 0.13 4.3E-06 36.0 1.6 27 45-72 73-99 (129)
201 2dlk_A Novel protein; ZF-C2H2 89.6 0.087 3E-06 33.6 0.7 30 45-74 6-37 (79)
202 2ab3_A ZNF29; zinc finger prot 89.5 0.1 3.6E-06 26.7 0.8 21 47-67 3-25 (29)
203 2ctd_A Zinc finger protein 512 89.4 0.18 6.1E-06 35.0 2.2 29 44-72 60-88 (96)
204 2d9h_A Zinc finger protein 692 89.3 0.11 3.9E-06 33.3 1.0 28 44-72 5-32 (78)
205 2kmk_A Zinc finger protein GFI 89.1 0.12 4.1E-06 32.8 1.0 24 45-68 56-79 (82)
206 2lv2_A Insulinoma-associated p 89.0 0.12 4E-06 36.2 1.0 29 44-73 26-54 (85)
207 1llm_C Chimera of ZIF23-GCN4; 88.7 0.16 5.5E-06 33.4 1.5 23 48-70 60-82 (88)
208 2dmd_A Zinc finger protein 64, 88.6 0.099 3.4E-06 34.4 0.4 21 47-67 37-57 (96)
209 1wjp_A Zinc finger protein 295 88.4 0.21 7.2E-06 33.9 1.9 19 48-66 44-62 (107)
210 1a1h_A QGSR zinc finger peptid 88.2 0.12 4.1E-06 33.5 0.6 27 45-72 33-59 (90)
211 2jp9_A Wilms tumor 1; DNA bind 87.6 0.15 5E-06 34.6 0.7 21 47-67 67-87 (119)
212 1j5x_A Glucosamine-6-phosphate 87.5 1 3.4E-05 38.0 6.0 61 109-169 72-150 (342)
213 1x6h_A Transcriptional repress 87.3 0.14 4.8E-06 32.9 0.5 26 45-70 46-71 (86)
214 2epa_A Krueppel-like factor 10 86.8 0.14 4.6E-06 32.4 0.2 29 44-73 15-45 (72)
215 2kmk_A Zinc finger protein GFI 86.8 0.21 7.3E-06 31.6 1.1 21 48-68 3-23 (82)
216 2e72_A POGO transposable eleme 86.7 0.32 1.1E-05 32.7 1.9 21 47-67 13-33 (49)
217 2i13_A AART; DNA binding, zinc 86.7 0.15 5.1E-06 37.9 0.4 21 47-67 134-154 (190)
218 2dmd_A Zinc finger protein 64, 86.4 0.14 4.7E-06 33.7 0.0 28 45-73 63-90 (96)
219 3cvj_A Putative phosphoheptose 86.3 0.41 1.4E-05 37.9 2.8 48 122-169 108-169 (243)
220 2wbs_A Krueppel-like factor 4; 86.1 0.18 6.2E-06 32.5 0.5 23 45-67 64-86 (89)
221 2wbt_A B-129; zinc finger; 2.7 86.1 0.24 8.3E-06 34.6 1.2 27 44-70 98-124 (129)
222 2gli_A Protein (five-finger GL 85.9 0.21 7E-06 35.6 0.8 22 47-68 4-25 (155)
223 2rpc_A Zinc finger protein ZIC 85.8 0.24 8.4E-06 35.4 1.1 30 45-74 24-53 (155)
224 2dmi_A Teashirt homolog 3; zin 85.5 0.24 8.2E-06 33.8 0.9 25 44-68 17-41 (115)
225 1f2i_G Fusion of N-terminal 17 85.2 0.2 7E-06 31.5 0.4 29 44-73 17-47 (73)
226 2yt9_A Zinc finger-containing 85.0 0.25 8.7E-06 32.3 0.8 24 45-68 34-57 (95)
227 2csh_A Zinc finger protein 297 84.6 0.22 7.4E-06 33.8 0.3 28 45-73 36-63 (110)
228 2zj3_A Glucosamine--fructose-6 84.5 1 3.5E-05 38.5 4.6 48 122-169 107-157 (375)
229 2l82_A Designed protein OR32; 84.3 2 6.7E-05 34.1 5.8 59 110-168 47-125 (162)
230 1nri_A Hypothetical protein HI 84.1 1 3.5E-05 37.6 4.3 49 122-170 140-191 (306)
231 2dlq_A GLI-kruppel family memb 83.4 0.41 1.4E-05 32.5 1.4 24 45-68 34-57 (124)
232 2eod_A TNF receptor-associated 83.1 0.24 8E-06 31.2 0.0 27 44-71 34-61 (66)
233 1ubd_C Protein (YY1 zinc finge 82.5 0.26 8.8E-06 33.9 -0.0 21 47-67 35-55 (124)
234 2ctu_A Zinc finger protein 483 82.4 0.029 9.8E-07 35.0 -4.5 29 44-73 37-65 (73)
235 2a3n_A Putative glucosamine-fr 82.3 1.4 4.7E-05 37.3 4.4 83 87-169 38-152 (355)
236 2ee8_A Protein ODD-skipped-rel 82.2 0.5 1.7E-05 31.6 1.4 23 45-67 16-38 (106)
237 2aml_A SIS domain protein; 469 81.9 1.4 4.8E-05 37.6 4.4 47 123-169 98-148 (373)
238 2rpc_A Zinc finger protein ZIC 81.8 0.24 8.1E-06 35.5 -0.4 19 49-67 93-113 (155)
239 2poc_A D-fructose-6- PH, isome 81.6 1.6 5.4E-05 37.1 4.6 47 123-169 98-147 (367)
240 3jy6_A Transcriptional regulat 81.3 2.4 8.3E-05 32.6 5.2 49 106-156 28-95 (276)
241 2j7j_A Transcription factor II 81.2 0.61 2.1E-05 29.5 1.4 25 48-73 3-29 (85)
242 3eua_A Putative fructose-amino 80.7 1.8 6E-05 36.4 4.5 47 123-169 75-124 (329)
243 2gli_A Protein (five-finger GL 80.6 0.41 1.4E-05 34.0 0.5 24 47-70 129-154 (155)
244 2jp9_A Wilms tumor 1; DNA bind 80.4 0.62 2.1E-05 31.4 1.4 23 46-68 36-60 (119)
245 3g68_A Putative phosphosugar i 80.1 2.2 7.6E-05 36.3 5.0 47 123-169 83-132 (352)
246 1ubd_C Protein (YY1 zinc finge 80.1 0.42 1.4E-05 32.8 0.4 16 52-67 100-115 (124)
247 2j7j_A Transcription factor II 80.0 0.58 2E-05 29.6 1.0 21 47-67 32-54 (85)
248 2eod_A TNF receptor-associated 79.9 0.41 1.4E-05 30.0 0.3 24 44-68 8-31 (66)
249 3knz_A Putative sugar binding 79.6 2.3 7.9E-05 36.6 5.0 48 122-169 97-147 (366)
250 3l6u_A ABC-type sugar transpor 79.0 3.1 0.00011 32.0 5.1 51 106-156 29-99 (293)
251 3g1w_A Sugar ABC transporter; 78.9 3.1 0.00011 32.2 5.1 51 106-156 25-96 (305)
252 2ebt_A Krueppel-like factor 5; 78.6 0.41 1.4E-05 31.4 -0.0 22 46-67 15-38 (100)
253 3hba_A Putative phosphosugar i 78.5 2.5 8.7E-05 35.8 4.9 47 123-169 91-140 (334)
254 2epa_A Krueppel-like factor 10 78.5 0.42 1.4E-05 30.1 -0.0 24 44-67 45-70 (72)
255 1vd4_A Transcription initiatio 78.4 0.25 8.4E-06 31.2 -1.1 27 44-74 12-38 (62)
256 3fkj_A Putative phosphosugar i 78.2 2.2 7.4E-05 36.3 4.4 46 123-168 90-138 (347)
257 3o74_A Fructose transport syst 77.4 2 7E-05 32.5 3.6 51 106-156 23-92 (272)
258 3h75_A Periplasmic sugar-bindi 77.4 3.4 0.00012 33.1 5.1 35 122-156 62-96 (350)
259 3l49_A ABC sugar (ribose) tran 76.7 3.5 0.00012 31.6 4.8 51 106-156 26-96 (291)
260 1moq_A Glucosamine 6-phosphate 76.0 2.5 8.4E-05 35.8 4.1 47 123-169 100-150 (368)
261 3fj1_A Putative phosphosugar i 75.9 2.9 0.0001 35.4 4.5 48 122-169 91-141 (344)
262 3m9w_A D-xylose-binding peripl 75.8 4 0.00014 31.9 5.0 51 106-156 23-93 (313)
263 3ksm_A ABC-type sugar transpor 75.0 4.5 0.00016 30.5 4.9 51 106-156 21-94 (276)
264 2dri_A D-ribose-binding protei 74.6 4.6 0.00016 31.0 5.0 34 122-155 57-91 (271)
265 3tb6_A Arabinose metabolism tr 74.4 4.9 0.00017 30.7 5.1 51 106-156 36-109 (298)
266 2fn9_A Ribose ABC transporter, 74.1 4.8 0.00017 30.9 5.0 34 122-155 58-92 (290)
267 2ioy_A Periplasmic sugar-bindi 73.8 4.9 0.00017 31.1 5.0 34 122-155 57-91 (283)
268 2i13_A AART; DNA binding, zinc 72.3 1.2 4.2E-05 32.8 1.2 24 49-73 164-187 (190)
269 3uug_A Multiple sugar-binding 72.2 5.3 0.00018 31.3 4.9 51 106-156 24-94 (330)
270 2wbs_A Krueppel-like factor 4; 72.0 0.89 3.1E-05 29.1 0.3 24 48-72 37-62 (89)
271 1tf6_A Protein (transcription 71.9 1.1 3.8E-05 33.1 0.8 26 45-71 133-160 (190)
272 8abp_A L-arabinose-binding pro 71.2 8.3 0.00028 29.7 5.7 49 106-154 23-90 (306)
273 3dbi_A Sugar-binding transcrip 70.5 6.5 0.00022 31.3 5.1 51 106-156 84-153 (338)
274 1tf6_A Protein (transcription 70.2 1.1 3.8E-05 33.1 0.5 27 45-71 71-99 (190)
275 2vk2_A YTFQ, ABC transporter p 70.1 6.3 0.00021 30.8 4.9 50 106-155 23-92 (306)
276 3tbf_A Glucosamine--fructose-6 69.4 3.9 0.00013 35.1 3.8 48 122-169 101-152 (372)
277 3e3m_A Transcriptional regulat 69.2 9.1 0.00031 30.9 5.8 50 106-156 91-159 (355)
278 3kjx_A Transcriptional regulat 69.0 7 0.00024 31.3 5.0 50 106-156 89-157 (344)
279 3huu_A Transcription regulator 67.7 5.4 0.00019 31.2 4.0 33 122-155 83-115 (305)
280 3k4h_A Putative transcriptiona 67.5 5.7 0.0002 30.4 4.0 49 106-155 34-101 (292)
281 3qk7_A Transcriptional regulat 67.3 7.6 0.00026 30.3 4.8 49 106-155 31-97 (294)
282 2fep_A Catabolite control prot 66.7 8.8 0.0003 29.8 5.0 33 122-155 72-104 (289)
283 3d8u_A PURR transcriptional re 66.1 6.8 0.00023 29.7 4.2 33 122-155 59-91 (275)
284 3egc_A Putative ribose operon 66.1 3.5 0.00012 31.8 2.6 50 106-156 29-97 (291)
285 3i09_A Periplasmic branched-ch 65.8 5.5 0.00019 31.9 3.8 34 122-155 195-230 (375)
286 3hcw_A Maltose operon transcri 65.7 6.7 0.00023 30.6 4.2 50 106-156 33-101 (295)
287 3hut_A Putative branched-chain 65.6 4.5 0.00015 32.0 3.2 33 122-154 194-226 (358)
288 1y81_A Conserved hypothetical 65.1 3.5 0.00012 30.7 2.3 50 104-153 30-100 (138)
289 3h5o_A Transcriptional regulat 64.1 11 0.00036 30.2 5.1 50 106-156 83-151 (339)
290 3mmz_A Putative HAD family hyd 64.1 12 0.00042 27.7 5.2 61 107-170 47-127 (176)
291 4eyg_A Twin-arginine transloca 63.7 12 0.00041 29.6 5.3 32 122-153 194-228 (368)
292 3gv0_A Transcriptional regulat 63.6 9.5 0.00032 29.5 4.7 49 106-155 31-98 (288)
293 3c3j_A Putative tagatose-6-pho 63.4 7.3 0.00025 33.2 4.3 56 110-165 74-151 (384)
294 3bbl_A Regulatory protein of L 62.9 8.9 0.0003 29.6 4.4 33 122-155 64-96 (287)
295 2bpl_A Glucosamine--fructose-6 62.5 7.9 0.00027 35.2 4.6 46 123-168 340-389 (608)
296 3gbv_A Putative LACI-family tr 62.1 8.8 0.0003 29.4 4.2 35 122-156 69-104 (304)
297 2fvy_A D-galactose-binding per 61.1 9.1 0.00031 29.4 4.1 35 122-156 59-94 (309)
298 3brq_A HTH-type transcriptiona 60.8 16 0.00055 27.7 5.5 32 122-154 77-109 (296)
299 3lkb_A Probable branched-chain 60.8 7.3 0.00025 31.4 3.6 34 122-155 198-231 (392)
300 3sg0_A Extracellular ligand-bi 60.2 8.4 0.00029 30.5 3.9 33 122-154 214-246 (386)
301 2h3h_A Sugar ABC transporter, 60.0 14 0.00047 28.9 5.1 34 122-155 57-91 (313)
302 1tjy_A Sugar transport protein 60.0 12 0.00043 29.6 4.9 34 122-155 60-94 (316)
303 3rot_A ABC sugar transporter, 60.0 13 0.00046 28.8 5.0 35 122-156 61-96 (297)
304 3odp_A Putative tagatose-6-pho 59.1 13 0.00044 32.3 5.2 42 124-165 110-156 (393)
305 4evq_A Putative ABC transporte 58.8 9.4 0.00032 30.3 3.9 34 122-155 206-239 (375)
306 3kke_A LACI family transcripti 58.7 11 0.00037 29.5 4.2 50 106-156 36-104 (303)
307 2rjo_A Twin-arginine transloca 58.3 8.8 0.0003 30.5 3.7 34 123-156 64-98 (332)
308 2l69_A Rossmann 2X3 fold prote 58.3 15 0.0005 28.4 4.7 43 108-150 19-79 (134)
309 1jx6_A LUXP protein; protein-l 57.8 14 0.00047 29.3 4.7 34 122-155 104-137 (342)
310 2duw_A Putative COA-binding pr 57.8 5 0.00017 29.9 2.0 32 122-153 70-101 (145)
311 3q87_A Putative uncharacterize 57.7 4.4 0.00015 31.3 1.8 10 49-58 102-111 (125)
312 3cs3_A Sugar-binding transcrip 57.6 14 0.00049 28.2 4.7 49 106-155 29-89 (277)
313 3ff4_A Uncharacterized protein 57.2 3.1 0.00011 30.9 0.8 54 102-155 18-91 (122)
314 3lop_A Substrate binding perip 57.1 4.8 0.00016 32.1 2.0 33 122-154 196-228 (364)
315 3n0w_A ABC branched chain amin 56.9 8.6 0.00029 30.9 3.4 34 122-155 197-233 (379)
316 2jvx_A NF-kappa-B essential mo 56.4 4.1 0.00014 24.2 1.1 23 46-68 3-25 (28)
317 1gud_A ALBP, D-allose-binding 56.4 14 0.00049 28.6 4.5 34 122-155 59-93 (288)
318 1nu0_A Hypothetical protein YQ 56.2 14 0.00049 28.1 4.4 30 131-160 38-72 (138)
319 2elu_A Zinc finger protein 406 56.1 4.6 0.00016 25.4 1.3 26 47-72 10-35 (37)
320 3snr_A Extracellular ligand-bi 55.4 11 0.00036 29.5 3.7 32 122-153 190-221 (362)
321 3k9c_A Transcriptional regulat 55.4 17 0.00058 28.1 4.8 49 106-156 32-98 (289)
322 3brs_A Periplasmic binding pro 54.8 9.3 0.00032 29.2 3.2 34 122-155 65-99 (289)
323 2e5f_A Hypothetical protein PH 54.8 31 0.0011 28.5 6.6 59 109-169 51-125 (325)
324 3ipc_A ABC transporter, substr 54.6 5.3 0.00018 31.6 1.8 33 122-154 193-225 (356)
325 2iks_A DNA-binding transcripti 54.5 8.8 0.0003 29.7 3.0 16 138-153 92-107 (293)
326 1zw8_A Zinc-responsive transcr 54.3 7.1 0.00024 25.6 2.1 23 51-73 8-30 (64)
327 2o20_A Catabolite control prot 53.9 18 0.00061 28.7 4.8 33 122-155 119-151 (332)
328 3td9_A Branched chain amino ac 53.6 9.6 0.00033 30.3 3.2 33 122-154 204-236 (366)
329 3d02_A Putative LACI-type tran 53.1 18 0.00062 27.8 4.6 34 122-155 61-95 (303)
330 3c3k_A Alanine racemase; struc 52.2 18 0.00061 27.9 4.5 32 122-155 64-95 (285)
331 1shu_X Anthrax toxin receptor 52.1 19 0.00064 25.9 4.3 43 124-166 105-156 (182)
332 2hsg_A Glucose-resistance amyl 51.9 17 0.00057 28.8 4.3 33 122-155 116-148 (332)
333 2h0a_A TTHA0807, transcription 51.6 9.7 0.00033 28.9 2.8 33 122-155 55-87 (276)
334 1usg_A Leucine-specific bindin 51.6 11 0.00038 29.4 3.2 32 122-153 193-224 (346)
335 3e61_A Putative transcriptiona 51.5 12 0.00042 28.4 3.3 48 106-156 29-96 (277)
336 2x7x_A Sensor protein; transfe 51.5 15 0.0005 29.1 4.0 34 122-155 62-96 (325)
337 2yj3_A Copper-transporting ATP 56.4 3.2 0.00011 33.0 0.0 39 133-171 185-224 (263)
338 3fwz_A Inner membrane protein 50.7 13 0.00045 26.5 3.3 43 104-158 19-61 (140)
339 3bil_A Probable LACI-family tr 49.7 14 0.00049 29.8 3.7 33 122-155 122-154 (348)
340 3jx9_A Putative phosphoheptose 49.5 30 0.001 27.3 5.4 33 122-154 77-112 (170)
341 2jsp_A Transcriptional regulat 49.0 5.8 0.0002 29.1 1.1 21 47-70 22-42 (87)
342 1l8d_A DNA double-strand break 49.0 21 0.00073 25.2 4.1 10 49-58 50-59 (112)
343 1zw8_A Zinc-responsive transcr 48.9 7.5 0.00026 25.5 1.6 25 46-70 38-64 (64)
344 2djr_A Zinc finger BED domain- 48.9 9.2 0.00031 27.0 2.1 31 46-76 28-65 (76)
345 2d59_A Hypothetical protein PH 48.7 9.6 0.00033 28.3 2.3 33 122-154 77-109 (144)
346 3sm9_A Mglur3, metabotropic gl 47.8 17 0.0006 31.3 4.1 35 122-156 243-278 (479)
347 1tzb_A Glucose-6-phosphate iso 47.7 23 0.00077 29.1 4.6 44 122-168 79-125 (302)
348 2e7z_A Acetylene hydratase AHY 47.5 19 0.00066 32.9 4.5 47 122-169 160-212 (727)
349 3j08_A COPA, copper-exporting 47.4 22 0.00075 32.8 4.9 62 109-171 467-544 (645)
350 4f11_A Gamma-aminobutyric acid 47.2 13 0.00046 30.5 3.2 28 122-149 206-233 (433)
351 3n07_A 3-deoxy-D-manno-octulos 45.8 28 0.00096 26.7 4.7 58 109-167 62-138 (195)
352 1m65_A Hypothetical protein YC 45.2 16 0.00053 28.2 3.1 28 129-156 12-41 (245)
353 3i45_A Twin-arginine transloca 45.0 25 0.00085 28.3 4.4 33 122-154 199-233 (387)
354 2vpz_A Thiosulfate reductase; 44.9 23 0.00079 32.7 4.7 47 122-169 199-251 (765)
355 1pea_A Amidase operon; gene re 44.8 16 0.00056 29.4 3.3 34 122-155 197-233 (385)
356 2ct5_A Zinc finger BED domain 44.7 8.7 0.0003 26.9 1.4 31 46-76 29-62 (73)
357 3o1i_D Periplasmic protein TOR 43.6 15 0.00052 28.1 2.8 33 122-155 63-96 (304)
358 3i0z_A Putative tagatose-6-pho 43.5 23 0.00077 30.7 4.2 44 123-166 110-158 (389)
359 2iv2_X Formate dehydrogenase H 43.1 22 0.00075 32.5 4.2 47 122-169 166-217 (715)
360 3skx_A Copper-exporting P-type 43.0 37 0.0013 25.5 4.9 34 137-171 197-231 (280)
361 2kpo_A Rossmann 2X2 fold prote 42.8 16 0.00055 27.4 2.7 33 122-154 51-85 (110)
362 4hcj_A THIJ/PFPI domain protei 42.4 23 0.00078 27.3 3.7 41 107-147 27-102 (177)
363 1dbq_A Purine repressor; trans 42.3 51 0.0018 25.0 5.6 32 122-154 63-95 (289)
364 3sp4_A Aprataxin-like protein; 42.3 13 0.00044 30.6 2.3 23 46-68 169-192 (204)
365 2pln_A HP1043, response regula 42.1 74 0.0025 21.2 6.7 50 107-158 34-98 (137)
366 3rfu_A Copper efflux ATPase; a 41.9 21 0.0007 33.8 3.9 62 109-170 564-641 (736)
367 2b2x_A Integrin alpha-1; compu 41.4 28 0.00094 26.5 4.0 32 124-155 126-162 (223)
368 3ij5_A 3-deoxy-D-manno-octulos 40.5 38 0.0013 26.4 4.7 60 107-168 84-163 (211)
369 3o9x_A Uncharacterized HTH-typ 39.9 31 0.0011 24.4 3.8 27 49-75 39-65 (133)
370 3clk_A Transcription regulator 39.5 26 0.00089 26.9 3.6 33 122-155 65-97 (290)
371 1iv0_A Hypothetical protein; r 39.5 15 0.00051 26.4 2.0 30 130-159 35-69 (98)
372 3saj_A Glutamate receptor 1; r 39.4 55 0.0019 26.5 5.7 27 122-148 182-208 (384)
373 3eaf_A ABC transporter, substr 39.4 24 0.00081 28.5 3.5 34 122-155 199-232 (391)
374 3ibs_A Conserved hypothetical 39.2 40 0.0014 25.0 4.5 34 123-156 112-149 (218)
375 3g85_A Transcriptional regulat 38.2 13 0.00044 28.5 1.6 50 106-156 33-101 (289)
376 4gib_A Beta-phosphoglucomutase 37.9 29 0.001 26.4 3.6 38 124-168 189-226 (250)
377 3v7e_A Ribosome-associated pro 37.3 93 0.0032 21.2 5.8 59 109-169 4-74 (82)
378 2e4u_A Metabotropic glutamate 37.2 32 0.0011 30.0 4.1 32 122-153 244-275 (555)
379 3dfu_A Uncharacterized protein 36.8 64 0.0022 26.4 5.7 50 103-154 17-74 (232)
380 1zu1_A DSRBP-ZFA, RNA binding 36.7 15 0.00052 27.1 1.7 35 44-81 91-125 (127)
381 3n2n_F Anthrax toxin receptor 36.4 37 0.0013 24.4 3.8 42 124-165 108-158 (185)
382 1y80_A Predicted cobalamin bin 36.2 79 0.0027 24.3 5.9 49 107-155 108-179 (210)
383 3ic5_A Putative saccharopine d 35.7 26 0.00089 23.0 2.7 34 122-155 69-102 (118)
384 1tq8_A Hypothetical protein RV 35.6 62 0.0021 23.4 4.9 30 133-162 106-135 (163)
385 3a1c_A Probable copper-exporti 35.5 54 0.0019 25.8 4.9 24 147-170 225-249 (287)
386 1q16_A Respiratory nitrate red 35.2 34 0.0011 34.7 4.4 47 122-169 246-297 (1247)
387 3vot_A L-amino acid ligase, BL 35.0 29 0.00099 29.1 3.4 33 125-157 7-39 (425)
388 3e8m_A Acylneuraminate cytidyl 34.9 47 0.0016 23.4 4.1 8 148-155 97-104 (164)
389 2ivf_A Ethylbenzene dehydrogen 34.6 44 0.0015 32.1 5.0 47 122-169 246-297 (976)
390 4eze_A Haloacid dehalogenase-l 33.9 79 0.0027 26.0 5.9 32 139-170 252-287 (317)
391 3miz_A Putative transcriptiona 33.9 7 0.00024 30.4 -0.5 31 122-154 70-100 (301)
392 2nap_A Protein (periplasmic ni 33.2 41 0.0014 30.6 4.3 47 122-169 166-219 (723)
393 3tbf_A Glucosamine--fructose-6 33.2 42 0.0015 28.6 4.2 35 122-156 276-313 (372)
394 1v95_A Nuclear receptor coacti 33.0 56 0.0019 25.0 4.5 42 107-155 27-70 (130)
395 3dcp_A Histidinol-phosphatase; 32.9 32 0.0011 28.4 3.3 30 129-158 11-43 (283)
396 1iuk_A Hypothetical protein TT 32.8 12 0.00039 27.8 0.5 30 123-152 71-100 (140)
397 3h5l_A Putative branched-chain 32.7 46 0.0016 27.1 4.2 33 122-154 219-252 (419)
398 4gxw_A Adenosine deaminase; am 32.6 43 0.0015 29.2 4.2 32 122-156 184-220 (380)
399 1h0h_A Formate dehydrogenase ( 32.6 53 0.0018 31.6 5.2 47 122-169 184-235 (977)
400 1n3y_A Integrin alpha-X; alpha 32.5 55 0.0019 23.8 4.3 43 124-166 112-167 (198)
401 3ewi_A N-acylneuraminate cytid 32.4 77 0.0026 23.8 5.2 31 137-167 87-121 (168)
402 3m9l_A Hydrolase, haloacid deh 32.4 36 0.0012 24.5 3.2 44 126-173 147-191 (205)
403 2yxb_A Coenzyme B12-dependent 32.3 59 0.002 24.6 4.5 49 107-155 38-108 (161)
404 3hgm_A Universal stress protei 32.3 48 0.0016 22.6 3.7 29 133-161 97-125 (147)
405 1atz_A VON willebrand factor; 32.3 50 0.0017 24.2 4.0 41 126-166 112-158 (189)
406 3n1u_A Hydrolase, HAD superfam 32.2 75 0.0026 23.8 5.1 13 109-121 56-68 (191)
407 1v7p_C Integrin alpha-2; snake 32.2 49 0.0017 24.5 4.0 31 124-154 110-145 (200)
408 3p96_A Phosphoserine phosphata 32.2 96 0.0033 25.9 6.2 65 106-170 263-364 (415)
409 2cxx_A Probable GTP-binding pr 32.0 54 0.0018 23.1 4.0 37 122-158 82-134 (190)
410 3j09_A COPA, copper-exporting 31.6 58 0.002 30.3 5.2 62 109-171 545-622 (723)
411 3odp_A Putative tagatose-6-pho 31.5 34 0.0012 29.7 3.4 46 122-167 281-332 (393)
412 4fe7_A Xylose operon regulator 30.7 43 0.0015 27.8 3.7 31 122-155 76-106 (412)
413 3pqc_A Probable GTP-binding pr 30.6 45 0.0015 23.5 3.4 36 122-157 104-144 (195)
414 1qkk_A DCTD, C4-dicarboxylate 30.6 1.3E+02 0.0044 20.5 5.8 52 106-157 18-86 (155)
415 3llv_A Exopolyphosphatase-rela 30.3 42 0.0014 23.4 3.2 44 104-159 18-61 (141)
416 2wji_A Ferrous iron transport 30.1 73 0.0025 22.4 4.5 37 122-158 81-120 (165)
417 1mjh_A Protein (ATP-binding do 30.0 55 0.0019 22.9 3.7 45 110-161 91-135 (162)
418 1wyz_A Putative S-adenosylmeth 29.9 43 0.0015 26.7 3.5 37 136-173 102-138 (242)
419 2gm3_A Unknown protein; AT3G01 29.7 62 0.0021 23.1 4.0 45 111-162 96-140 (175)
420 4fj3_P RAF proto-oncogene seri 29.6 16 0.00054 23.0 0.7 13 24-36 3-15 (36)
421 4g84_A Histidine--tRNA ligase, 29.4 37 0.0013 29.1 3.2 43 106-155 384-427 (464)
422 1id1_A Putative potassium chan 29.4 38 0.0013 24.2 2.8 47 104-158 15-61 (153)
423 4fc5_A TON_0340, putative unch 29.4 36 0.0012 29.0 3.1 23 133-155 136-158 (270)
424 1pt6_A Integrin alpha-1; cell 29.3 50 0.0017 24.8 3.6 32 124-155 111-147 (213)
425 3rag_A Uncharacterized protein 29.1 76 0.0026 26.6 5.0 43 123-165 10-65 (242)
426 1eu1_A Dimethyl sulfoxide redu 29.0 48 0.0016 30.6 4.1 47 122-169 177-237 (780)
427 1ijb_A VON willebrand factor; 28.9 72 0.0025 23.9 4.5 42 124-165 117-168 (202)
428 3hs3_A Ribose operon repressor 28.9 11 0.00037 29.1 -0.2 28 122-155 67-94 (277)
429 3s3t_A Nucleotide-binding prot 28.9 52 0.0018 22.4 3.4 29 133-161 94-123 (146)
430 2d9k_A FLN29 gene product; zin 28.3 17 0.00057 23.8 0.7 17 49-66 46-62 (75)
431 1ccw_A Protein (glutamate muta 28.0 1.2E+02 0.0042 22.0 5.5 48 108-155 24-93 (137)
432 2zv3_A PTH, peptidyl-tRNA hydr 27.8 40 0.0014 24.8 2.7 34 122-155 48-82 (115)
433 4hqo_A Sporozoite surface prot 27.6 62 0.0021 25.6 4.1 42 124-165 127-176 (266)
434 3hba_A Putative phosphosugar i 27.6 80 0.0027 26.5 4.9 34 122-155 253-289 (334)
435 2gk3_A Putative cytoplasmic pr 27.6 1.4E+02 0.0047 24.0 6.2 50 107-156 45-128 (256)
436 3mn1_A Probable YRBI family ph 27.5 84 0.0029 23.3 4.6 21 148-168 112-133 (189)
437 3n28_A Phosphoserine phosphata 27.3 1.1E+02 0.0038 24.5 5.5 33 138-170 250-286 (335)
438 3ks9_A Mglur1, metabotropic gl 27.3 76 0.0026 27.4 4.8 35 122-156 256-293 (496)
439 2p11_A Hypothetical protein; p 27.1 77 0.0026 23.5 4.3 51 123-173 161-218 (231)
440 1mf7_A Integrin alpha M; cell 26.9 54 0.0019 24.0 3.4 42 124-165 108-162 (194)
441 2r8e_A 3-deoxy-D-manno-octulos 26.9 1.2E+02 0.0042 22.2 5.4 9 141-149 132-140 (188)
442 3gyb_A Transcriptional regulat 26.7 68 0.0023 24.2 4.0 46 106-156 26-89 (280)
443 2xgg_A Microneme protein 2; A/ 26.7 84 0.0029 22.9 4.4 33 124-156 124-161 (178)
444 3l9w_A Glutathione-regulated p 26.7 33 0.0011 29.9 2.4 45 105-161 17-61 (413)
445 3gyg_A NTD biosynthesis operon 26.4 2.2E+02 0.0075 21.9 7.0 62 109-170 176-252 (289)
446 2z08_A Universal stress protei 26.3 58 0.002 22.2 3.3 28 133-160 86-113 (137)
447 1tmo_A TMAO reductase, trimeth 26.3 59 0.002 30.2 4.2 47 122-169 210-274 (829)
448 3g68_A Putative phosphosugar i 26.2 86 0.0029 26.4 4.9 35 122-156 257-292 (352)
449 4gud_A Imidazole glycerol phos 26.1 83 0.0028 23.8 4.4 36 107-143 18-60 (211)
450 2rgy_A Transcriptional regulat 26.0 63 0.0022 24.8 3.7 30 123-153 68-97 (290)
451 2lkc_A Translation initiation 25.9 76 0.0026 22.0 3.9 36 122-157 78-118 (178)
452 3lmz_A Putative sugar isomeras 25.9 66 0.0023 24.7 3.8 43 108-153 67-109 (257)
453 1qpz_A PURA, protein (purine n 25.7 1E+02 0.0034 24.4 4.9 16 9-24 3-18 (340)
454 2lqo_A Putative glutaredoxin R 25.7 46 0.0016 23.1 2.6 41 110-156 23-65 (92)
455 3lc0_A Histidyl-tRNA synthetas 25.5 61 0.0021 28.7 4.0 62 90-151 319-393 (456)
456 3ddh_A Putative haloacid dehal 25.5 1.8E+02 0.006 20.4 6.8 40 127-166 152-196 (234)
457 1kqf_A FDH-N alpha, formate de 25.4 69 0.0024 31.0 4.6 47 122-169 222-274 (1015)
458 4g85_A Histidine-tRNA ligase, 25.4 52 0.0018 29.1 3.5 43 106-155 437-480 (517)
459 4hqf_A Thrombospondin-related 25.3 74 0.0025 25.2 4.1 43 124-166 130-180 (281)
460 2zj3_A Glucosamine--fructose-6 25.2 84 0.0029 26.6 4.7 77 88-164 218-325 (375)
461 2dum_A Hypothetical protein PH 25.1 71 0.0024 22.6 3.6 29 133-161 104-132 (170)
462 1dp4_A Atrial natriuretic pept 24.9 66 0.0023 26.1 3.8 35 122-156 206-244 (435)
463 1uxy_A MURB, uridine diphospho 24.9 49 0.0017 28.4 3.2 34 123-156 15-48 (340)
464 2nvo_A RO sixty-related protei 24.6 82 0.0028 28.3 4.7 35 122-156 456-499 (535)
465 1vhv_A Diphthine synthase; str 24.6 1.2E+02 0.004 24.4 5.2 48 124-172 89-140 (268)
466 3fg9_A Protein of universal st 24.4 1.1E+02 0.0037 21.3 4.5 29 132-160 104-133 (156)
467 2i2x_B MTAC, methyltransferase 24.4 1.3E+02 0.0045 24.2 5.5 49 107-155 143-212 (258)
468 3dlo_A Universal stress protei 24.3 77 0.0026 22.6 3.7 44 108-156 84-127 (155)
469 3pzy_A MOG; ssgcid, seattle st 24.1 46 0.0016 25.4 2.6 48 103-155 28-75 (164)
470 2xp1_A SPT6; transcription, IW 24.1 23 0.00077 28.2 0.8 18 52-69 160-177 (178)
471 3p6l_A Sugar phosphate isomera 24.1 96 0.0033 23.7 4.4 45 108-155 69-113 (262)
472 3tx1_A UDP-N-acetylenolpyruvoy 23.9 45 0.0015 28.4 2.7 35 122-156 54-88 (322)
473 3knz_A Putative sugar binding 23.8 69 0.0023 27.3 3.9 35 122-156 272-307 (366)
474 1jye_A Lactose operon represso 23.6 80 0.0027 25.2 4.1 19 7-25 4-22 (349)
475 3glv_A Lipopolysaccharide core 23.4 68 0.0023 23.4 3.3 30 123-156 66-95 (143)
476 1ti6_A Pyrogallol hydroxytrans 23.2 78 0.0027 29.8 4.4 46 122-169 208-265 (875)
477 2qr3_A Two-component system re 22.9 1.7E+02 0.0057 19.2 5.5 51 107-157 19-91 (140)
478 1fiz_L Beta-acrosin light chai 22.7 21 0.00072 21.1 0.3 10 51-60 9-18 (26)
479 2z6r_A Diphthine synthase; met 22.5 1.7E+02 0.0058 23.2 5.8 47 124-172 79-129 (265)
480 4dw8_A Haloacid dehalogenase-l 22.1 57 0.0019 24.9 2.8 55 116-170 179-238 (279)
481 3o21_A Glutamate receptor 3; p 22.1 1.1E+02 0.0038 25.0 4.7 27 122-148 185-211 (389)
482 1fiw_L Beta-acrosin light chai 21.6 23 0.00078 20.9 0.3 10 51-60 8-17 (26)
483 1wu7_A Histidyl-tRNA synthetas 21.4 1.1E+02 0.0036 26.3 4.6 22 133-154 369-391 (434)
484 4gpa_A Glutamate receptor 4; P 21.3 74 0.0025 25.0 3.3 27 122-148 184-210 (389)
485 2fqx_A Membrane lipoprotein TM 21.2 1.4E+02 0.0048 23.9 5.0 32 122-155 62-95 (318)
486 2bvf_A 6-hydroxy-D-nicotine ox 21.1 54 0.0018 28.5 2.7 35 122-156 38-72 (459)
487 1zr6_A Glucooligosaccharide ox 21.1 53 0.0018 29.2 2.7 35 122-156 42-76 (503)
488 3h5t_A Transcriptional regulat 21.0 84 0.0029 25.2 3.7 33 122-155 128-160 (366)
489 1yx1_A Hypothetical protein PA 21.0 2.1E+02 0.0072 21.8 5.9 46 107-154 56-105 (264)
490 3ar4_A Sarcoplasmic/endoplasmi 21.0 1.1E+02 0.0037 29.5 5.0 38 132-169 682-720 (995)
491 3sc6_A DTDP-4-dehydrorhamnose 21.0 83 0.0028 24.1 3.5 52 104-155 18-107 (287)
492 2ioj_A Hypothetical protein AF 21.0 65 0.0022 23.3 2.7 31 122-152 74-104 (139)
493 1rzw_A Protein AF2095(GR4); be 20.8 61 0.0021 24.4 2.6 40 109-155 41-81 (123)
494 1jmv_A USPA, universal stress 20.6 84 0.0029 21.3 3.2 28 134-162 90-117 (141)
495 2ipi_A Aclacinomycin oxidoredu 20.6 54 0.0018 29.3 2.7 35 122-156 55-89 (521)
496 2y3s_A TAML; oxidoreductase; H 20.5 58 0.002 29.3 2.9 35 122-156 58-92 (530)
497 3ghd_A A cystathionine beta-sy 20.5 1.6E+02 0.0053 19.0 4.3 30 126-155 2-31 (70)
498 1zu1_A DSRBP-ZFA, RNA binding 20.2 45 0.0015 24.5 1.7 26 46-71 32-58 (127)
499 3qek_A NMDA glutamate receptor 20.1 80 0.0027 25.4 3.4 27 122-148 215-241 (384)
500 3fzq_A Putative hydrolase; YP_ 20.1 62 0.0021 24.4 2.6 47 124-170 190-241 (274)
No 1
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=98.31 E-value=8.1e-07 Score=68.81 Aligned_cols=53 Identities=23% Similarity=0.296 Sum_probs=47.2
Q ss_pred ecceEEEEeCCCchHHHHHHHHHc-CccEEEEecC--Cchhhhhhhccccchhhhh
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLR-CLKMVVVGDM--SDGALKRIANAFFSWSDLL 174 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r-~l~TVVVGd~--~~~~L~r~Ad~~~sW~ev~ 174 (177)
.+|.+||||-|+||+++++.+|++ |.+.+|+|=. ....|.+.||-+++++++.
T Consensus 108 ~~d~~vLvSgD~DF~plv~~lr~~~G~~V~v~g~~~~~s~~L~~~ad~fi~l~~~~ 163 (165)
T 2qip_A 108 DVDRVILVSGDGDFSLLVERIQQRYNKKVTVYGVPRLTSQTLIDCADNFVAIDDDF 163 (165)
T ss_dssp GCSEEEEECCCGGGHHHHHHHHHHHCCEEEEEECGGGSCHHHHHHSSEEEECSGGG
T ss_pred cCCEEEEEECChhHHHHHHHHHHHcCcEEEEEeCCCcChHHHHHhCCEEEecchhh
Confidence 789999999999999999999997 9999999942 3368999999999888764
No 2
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=96.69 E-value=0.00033 Score=37.25 Aligned_cols=27 Identities=26% Similarity=0.341 Sum_probs=23.6
Q ss_pred hhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 47 CLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
+.|..||+.|.+...|..|...+|..|
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~~H~~~ 29 (30)
T 1paa_A 3 YACGLCNRAFTRRDLLIRHAQKIHSGN 29 (30)
T ss_dssp SBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred cCCcccCcccCChHHHHHHHHHHccCC
Confidence 569999999999999999977788655
No 3
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=96.49 E-value=0.00058 Score=41.71 Aligned_cols=33 Identities=18% Similarity=0.185 Sum_probs=26.1
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQKK 76 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr~K 76 (177)
++.+.|..||+.|.+...|.+|.+.+|..|...
T Consensus 5 ~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~ 37 (48)
T 3iuf_A 5 DKPYACDICGKRYKNRPGLSYHYAHSHLAEEEG 37 (48)
T ss_dssp TSCEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred CcCEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence 456789999999999999999998789877554
No 4
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.48 E-value=0.00077 Score=37.42 Aligned_cols=29 Identities=17% Similarity=0.210 Sum_probs=23.7
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+...|..|. ++|..|
T Consensus 7 ~~~~~C~~C~k~f~~~~~l~~H~-~~H~~e 35 (36)
T 2elr_A 7 GKTHLCDMCGKKFKSKGTLKSHK-LLHTAD 35 (36)
T ss_dssp CSSCBCTTTCCBCSSHHHHHHHH-HHHSSC
T ss_pred CCCeecCcCCCCcCchHHHHHHH-HHhcCC
Confidence 35577999999999999999996 456544
No 5
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.40 E-value=0.00071 Score=39.82 Aligned_cols=31 Identities=32% Similarity=0.500 Sum_probs=26.5
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|.+.+|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k 40 (47)
T 2epx_A 10 KKPYECIECGKAFIQNTSLIRHWRYYHTGEK 40 (47)
T ss_dssp CCSBCCSSSCCCBSSHHHHHHHHTTTTTTSC
T ss_pred CCCEECCccCchhCChHHHHHHhHhhcCCCC
Confidence 3567899999999999999999887887653
No 6
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=96.36 E-value=0.00061 Score=35.74 Aligned_cols=28 Identities=11% Similarity=0.139 Sum_probs=22.7
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
+.+.|..||+.|.+...|..|.+ +|..|
T Consensus 2 k~~~C~~C~~~f~~~~~l~~H~~-~h~~~ 29 (30)
T 2m0d_A 2 KPYQCDYCGRSFSDPTSKMRHLE-THDTD 29 (30)
T ss_dssp CCEECTTTCCEESCHHHHHHHHH-TTCCC
T ss_pred cCccCCCCCcccCCHHHHHHHHH-HhccC
Confidence 44679999999999999999975 46543
No 7
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.22 E-value=0.0019 Score=37.90 Aligned_cols=29 Identities=21% Similarity=0.184 Sum_probs=24.4
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+...|.+|. ++|..|
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~ 38 (46)
T 2eov_A 10 EKPYKCSDCGKSFTWKSRLRIHQ-KCHTGE 38 (46)
T ss_dssp CCSCBCSSSCCBCSSHHHHHHHH-HHHSCC
T ss_pred CCCccCCccChhhCCHHHHHHHH-HhcCCC
Confidence 45678999999999999999996 467655
No 8
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=96.16 E-value=0.0018 Score=36.24 Aligned_cols=28 Identities=25% Similarity=0.297 Sum_probs=23.7
Q ss_pred hhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 46 NCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 46 ~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
.+.|..||..|.+...|..|.+ +|..|+
T Consensus 2 p~~C~~C~k~F~~~~~L~~H~~-~H~~~~ 29 (33)
T 1rim_A 2 KFACPECPKRFMRSDHLSKHIT-LHELLG 29 (33)
T ss_dssp CCCCSSSCCCCSSHHHHHHHHH-HHTTTC
T ss_pred cccCCCCCchhCCHHHHHHHHH-HhCCCC
Confidence 3569999999999999999964 787765
No 9
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=95.15 E-value=0.00086 Score=35.40 Aligned_cols=28 Identities=36% Similarity=0.544 Sum_probs=23.0
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
+.+.|..||+.|.+...|..|-+ +|..|
T Consensus 2 k~~~C~~C~k~f~~~~~l~~H~~-~h~~~ 29 (30)
T 2lvr_A 2 KPYVCIHCQRQFADPGALQRHVR-IHTGE 29 (30)
Confidence 45779999999999999999965 46554
No 10
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=96.09 E-value=0.0012 Score=36.59 Aligned_cols=29 Identities=14% Similarity=0.224 Sum_probs=23.7
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+-|..||+.|.+...|..|.+ +|..|
T Consensus 5 ~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~ 33 (35)
T 1srk_A 5 KRPFVCRICLSAFTTKANCARHLK-VHTDT 33 (35)
T ss_dssp CSCEECSSSCCEESSHHHHHHHHG-GGTSC
T ss_pred CcCeeCCCCCcccCCHHHHHHHHH-HcCCC
Confidence 355779999999999999999964 57554
No 11
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.07 E-value=0.0012 Score=36.93 Aligned_cols=29 Identities=14% Similarity=0.022 Sum_probs=23.9
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+...|..|- ++|..|
T Consensus 7 ~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~ 35 (36)
T 2elq_A 7 GKPFKCSLCEYATRSKSNLKAHM-NRHSTE 35 (36)
T ss_dssp CCSEECSSSSCEESCHHHHHHHH-HHSSTT
T ss_pred CCCccCCCCCchhCCHHHHHHHH-HHhccC
Confidence 35577999999999999999996 467654
No 12
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=96.05 E-value=0.001 Score=41.15 Aligned_cols=31 Identities=23% Similarity=0.344 Sum_probs=27.0
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|.+++|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k 40 (54)
T 2eps_A 10 GKPYICQSCGKGFSRPDHLNGHIKQVHTSER 40 (54)
T ss_dssp SCCEECSSSCCEESSHHHHHHHHHHTSCCCC
T ss_pred CCCeECCCCCcccCCHHHHHHHHHHhcCCCC
Confidence 3557799999999999999999998997664
No 13
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=96.03 E-value=0.0023 Score=35.77 Aligned_cols=27 Identities=19% Similarity=0.114 Sum_probs=22.4
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHE 71 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHe 71 (177)
++.+-|..||+.|.+...|..|.+ +|.
T Consensus 9 ~k~~~C~~C~k~f~~~~~l~~H~~-~H~ 35 (37)
T 1p7a_A 9 IKPFQCPDCDRSFSRSDHLALHRK-RHM 35 (37)
T ss_dssp SSSBCCTTTCCCBSSHHHHHHHHG-GGT
T ss_pred CCCccCCCCCcccCcHHHHHHHHH-Hhc
Confidence 456779999999999999999954 454
No 14
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=96.03 E-value=0.002 Score=33.68 Aligned_cols=27 Identities=22% Similarity=0.346 Sum_probs=22.1
Q ss_pred hhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 46 NCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 46 ~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
.+.|..||+.|.+...|..|-+ +|..|
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~-~h~~~ 28 (29)
T 1ard_A 2 SFVCEVCTRAFARQEHLKRHYR-SHTNE 28 (29)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHH-HHSCC
T ss_pred CeECCCCCcccCCHHHHHHHHH-HhcCC
Confidence 3569999999999999999965 46543
No 15
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.03 E-value=0.0012 Score=36.54 Aligned_cols=29 Identities=21% Similarity=0.090 Sum_probs=23.9
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+...|..|.+ +|..|
T Consensus 7 ~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~ 35 (36)
T 2elt_A 7 GKPYKCPQCSYASAIKANLNVHLR-KHTGE 35 (36)
T ss_dssp CCSEECSSSSCEESSHHHHHHHHH-HHTCC
T ss_pred CCCCCCCCCCcccCCHHHHHHHHH-HccCC
Confidence 345779999999999999999964 67654
No 16
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.97 E-value=0.0023 Score=37.78 Aligned_cols=30 Identities=17% Similarity=0.230 Sum_probs=24.6
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|. ++|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k 39 (46)
T 2ytt_A 10 EKPYQCSECGKSFSGSYRLTQHW-ITHTREK 39 (46)
T ss_dssp CCTTCCSSSCCCCSSHHHHHHHH-THHHHCC
T ss_pred CCCeeCCCCCcccCCHHHHHHHH-HHcCCCC
Confidence 45577999999999999999995 4577653
No 17
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.95 E-value=0.0022 Score=37.83 Aligned_cols=30 Identities=20% Similarity=0.183 Sum_probs=24.7
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2yto_A 10 EKPYKCSDCGKAFTRKSGLHIHQQ-SHTGER 39 (46)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHH-HHTCCC
T ss_pred CCCEECcccCCccCCHhHHHHHHH-HcCCCC
Confidence 456789999999999999999964 576553
No 18
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.94 E-value=0.0018 Score=38.08 Aligned_cols=30 Identities=30% Similarity=0.345 Sum_probs=24.9
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|. .+|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k 39 (46)
T 2enf_A 10 EKPYKCNECGKVFTQNSHLVRHR-GIHTGEK 39 (46)
T ss_dssp CCSCBCSSSCCBCSSHHHHHHHH-TTTTTSS
T ss_pred CcCeECCCCCcccCCHHHHHHHH-HhhCCCC
Confidence 45678999999999999999995 5676653
No 19
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.93 E-value=0.0019 Score=38.24 Aligned_cols=30 Identities=23% Similarity=0.350 Sum_probs=24.6
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k 39 (46)
T 2eom_A 10 ERGHRCSDCGKFFLQASNFIQHRR-IHTGEK 39 (46)
T ss_dssp CSSCCCSSSCCCCSSHHHHHHHHH-HHSSCC
T ss_pred CCCcCCCCCCCeeCChHHHHHHHH-HhCCCC
Confidence 355779999999999999999965 676553
No 20
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.92 E-value=0.0023 Score=37.74 Aligned_cols=30 Identities=30% Similarity=0.355 Sum_probs=24.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k 39 (46)
T 2en9_A 10 KKLFKCNECKKTFTQSSSLTVHQR-IHTGEK 39 (46)
T ss_dssp SCCCBCTTTCCBCSSHHHHHHHHH-HHTSSC
T ss_pred CCCEECCccCcccCCHHHHHHHHH-HcCCCC
Confidence 456789999999999999999964 676553
No 21
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.90 E-value=0.0015 Score=36.40 Aligned_cols=29 Identities=24% Similarity=0.196 Sum_probs=23.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+-|..||..|.+...|..|.+ +|..|
T Consensus 7 ~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~ 35 (36)
T 2els_A 7 GKIFTCEYCNKVFKFKHSLQAHLR-IHTNE 35 (36)
T ss_dssp CCCEECTTTCCEESSHHHHHHHHH-HHCCC
T ss_pred CCCEECCCCCceeCCHHHHHHHHH-HhCCC
Confidence 355779999999999999999965 57544
No 22
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.88 E-value=0.0026 Score=37.17 Aligned_cols=30 Identities=23% Similarity=0.305 Sum_probs=24.5
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|-+ +|..|+
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (44)
T 2eou_A 10 KTTSECQECGKIFRHSSLLIEHQA-LHAGES 39 (44)
T ss_dssp SCCCCCTTTCCCCSSHHHHHHHHH-HHTTSC
T ss_pred CcCeECCCCCcccCCHHHHHHHHH-HHCCCC
Confidence 456779999999999999999964 576553
No 23
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.87 E-value=0.0025 Score=37.51 Aligned_cols=30 Identities=23% Similarity=0.375 Sum_probs=24.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2ep3_A 10 EKPYRCAECGKAFTDRSNLFTHQK-IHTGEK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHT-TTTTSC
T ss_pred CCCeECCCCCchhCCHHHHHHHHH-HcCCCC
Confidence 456789999999999999999974 676553
No 24
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.87 E-value=0.0032 Score=37.14 Aligned_cols=30 Identities=20% Similarity=0.268 Sum_probs=25.0
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2emz_A 10 ERPFKCNECGKGFGRRSHLAGHLR-LHSREK 39 (46)
T ss_dssp CCSCCCSSSCCCCSSHHHHHHHHH-HHHHTT
T ss_pred CCCeECCCCCcccCCHHHHHHHHH-HhCCCC
Confidence 456789999999999999999965 677654
No 25
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.87 E-value=0.0025 Score=37.36 Aligned_cols=30 Identities=30% Similarity=0.386 Sum_probs=24.7
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2ytr_A 10 EKPYKCNECGKAFSQTSKLARHQR-IHTGEK 39 (46)
T ss_dssp CCTTCCTTTCCCCSSHHHHHHHHT-TTTTCS
T ss_pred CcCcCCCCCCCccCCHHHHHHHHH-hcCCCC
Confidence 456789999999999999999964 676553
No 26
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=94.86 E-value=0.0014 Score=34.68 Aligned_cols=27 Identities=30% Similarity=0.523 Sum_probs=22.5
Q ss_pred hhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 46 NCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 46 ~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
.+.|..||+.|.+...|..|-+ +|..|
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~-~H~~~ 28 (29)
T 2lvt_A 2 PCQCVMCGKAFTQASSLIAHVR-QHTGE 28 (29)
Confidence 3569999999999999999964 67655
No 27
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=95.86 E-value=0.0027 Score=37.34 Aligned_cols=30 Identities=27% Similarity=0.367 Sum_probs=24.7
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2ema_A 10 EKRYKCNECGKVFSRNSQLSQHQK-IHTGEK 39 (46)
T ss_dssp SCCEECSSSCCEESSHHHHHHHHT-GGGCCC
T ss_pred CcCcCCCCCcchhCCHHHHHHHHH-hcCCCC
Confidence 456789999999999999999964 576553
No 28
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.86 E-value=0.0019 Score=37.97 Aligned_cols=29 Identities=24% Similarity=0.378 Sum_probs=24.3
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+...|.+|.+ +|..|
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2emg_A 10 ENPFICSECGKVFTHKTNLIIHQK-IHTGE 38 (46)
T ss_dssp CCSCBCTTTCCBCSSHHHHHHHHT-TTSCC
T ss_pred CCCEECCccCcccCCHHHHHHHHH-HhCCC
Confidence 356789999999999999999964 67655
No 29
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.86 E-value=0.002 Score=37.94 Aligned_cols=30 Identities=27% Similarity=0.308 Sum_probs=24.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|. .+|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k 39 (46)
T 2yti_A 10 EKPYKCNECGKVFTQNSHLARHR-GIHTGEK 39 (46)
T ss_dssp CCTTCCSSSCCCCSSHHHHHHHH-TTTSCSC
T ss_pred CcCeECCCCCcccCChhHHHHHh-HhcCCCC
Confidence 45678999999999999999995 5676553
No 30
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.85 E-value=0.0021 Score=37.81 Aligned_cols=30 Identities=30% Similarity=0.330 Sum_probs=24.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|. .+|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k 39 (46)
T 2ytn_A 10 KKPYKCNECGKVFTQNSHLARHR-GIHTGEK 39 (46)
T ss_dssp CSSCBCTTTCCBCSSHHHHHHHG-GGTSCCC
T ss_pred CcCeECCCCCCeeCCHHHHHHHh-hhcCCCC
Confidence 45678999999999999999995 5676553
No 31
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.83 E-value=0.0025 Score=37.63 Aligned_cols=30 Identities=27% Similarity=0.393 Sum_probs=24.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||..|.+...|..|. ++|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k 39 (46)
T 2yth_A 10 EKPFQCEECGKRFTQNSHLHSHQ-RVHTGEK 39 (46)
T ss_dssp SSSBCCSSSCCCBSSHHHHHHHG-GGGTTCC
T ss_pred CcCCCCCCCCcccCCHHHHHHHH-HhcCCCC
Confidence 45678999999999999999996 4687653
No 32
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.83 E-value=0.0016 Score=38.38 Aligned_cols=29 Identities=28% Similarity=0.346 Sum_probs=24.2
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+...|..|.+ +|..|
T Consensus 10 ~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2emi_A 10 ERHYECSECGKAFIQKSTLSMHQR-IHRGE 38 (46)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHG-GGCSC
T ss_pred CCCCCCCCCCcccCCHHHHHHHHh-HhCCC
Confidence 455789999999999999999954 67655
No 33
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=95.82 E-value=0.0037 Score=36.83 Aligned_cols=30 Identities=23% Similarity=0.379 Sum_probs=24.9
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k 39 (46)
T 2emk_A 10 EKPYECKECGKAFSQTTHLIQHQR-VHTGEK 39 (46)
T ss_dssp SCSCBCSSSCCBCSCHHHHHHHHH-HHSSCC
T ss_pred CCceECCCCCchhCCHHHHHHHHH-HcCCCC
Confidence 456889999999999999999975 576553
No 34
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=95.81 E-value=0.0019 Score=35.40 Aligned_cols=29 Identities=17% Similarity=0.222 Sum_probs=23.7
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.....|..|-+ +|..|
T Consensus 5 ~k~~~C~~C~k~f~~~~~L~~H~~-~h~~~ 33 (35)
T 2elx_A 5 SSGYVCALCLKKFVSSIRLRSHIR-EVHGA 33 (35)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHH-HTSCT
T ss_pred CCCeECCCCcchhCCHHHHHHHHH-HHcCC
Confidence 345779999999999999999965 56554
No 35
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=95.80 E-value=0.0017 Score=34.07 Aligned_cols=26 Identities=27% Similarity=0.373 Sum_probs=21.8
Q ss_pred hhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 47 CLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
+.|..||+.|.+...|..|-+ +|..|
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~-~H~~~ 28 (29)
T 1rik_A 3 FACPECPKRFMRSDHLTLHIL-LHENK 28 (29)
T ss_dssp EECSSSSCEESCSHHHHHHHT-GGGSC
T ss_pred ccCCCCCchhCCHHHHHHHHH-HhcCC
Confidence 569999999999999999975 57544
No 36
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.80 E-value=0.0025 Score=37.52 Aligned_cols=30 Identities=27% Similarity=0.312 Sum_probs=24.7
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||..|.+...|..|. ++|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k 39 (46)
T 2eq0_A 10 EKPYKCHECGKVFRRNSHLARHQ-LIHTGEK 39 (46)
T ss_dssp CCCEECTTTCCEESSHHHHHHHH-TTTCCCC
T ss_pred CCCeECCCCCchhCCHHHHHHHH-HHcCCCC
Confidence 45678999999999999999995 4676553
No 37
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.79 E-value=0.0016 Score=36.28 Aligned_cols=29 Identities=14% Similarity=0.007 Sum_probs=23.6
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+-|..||+.|.....|..|.+ +|..|
T Consensus 7 ~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~ 35 (36)
T 2elv_A 7 GLLYDCHICERKFKNELDRDRHML-VHGDK 35 (36)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHT-TTSTT
T ss_pred CCCeECCCCCCccCCHHHHHHHHH-HhcCC
Confidence 355779999999999999999964 56544
No 38
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.79 E-value=0.002 Score=36.12 Aligned_cols=29 Identities=24% Similarity=0.189 Sum_probs=23.7
Q ss_pred hhhhhhhhcCCCcCCh-hHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNN-DKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~-~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+. ..|..|.+ +|..|
T Consensus 7 ~k~~~C~~C~k~f~~~~~~L~~H~~-~H~~~ 36 (37)
T 2elp_A 7 GRAMKCPYCDFYFMKNGSDLQRHIW-AHEGV 36 (37)
T ss_dssp CCCEECSSSSCEECSSCHHHHHHHH-HHHTC
T ss_pred CCCeECCCCChhhccCHHHHHHHHH-hcCCC
Confidence 3557799999999999 99999974 67654
No 39
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.79 E-value=0.0021 Score=37.79 Aligned_cols=30 Identities=17% Similarity=0.127 Sum_probs=25.0
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|. .+|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~ 39 (46)
T 2en3_A 10 EKPFQCKECGMNFSWSCSLFKHL-RSHERTD 39 (46)
T ss_dssp CCSEECSSSCCEESSSHHHHHHH-HHHHHSC
T ss_pred CCCeeCcccChhhCCHHHHHHHH-HHhCCCC
Confidence 45678999999999999999997 5687653
No 40
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.78 E-value=0.0018 Score=38.11 Aligned_cols=30 Identities=20% Similarity=0.270 Sum_probs=24.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|. ++|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k 39 (46)
T 2em7_A 10 EKPYKCEECGKGFICRRDLYTHH-MVHTGEK 39 (46)
T ss_dssp CCSEECSSSCCEESCHHHHHHHG-GGGTTCC
T ss_pred CcCccCCCccchhCCHHHHHHHH-HHhCCCC
Confidence 45678999999999999999995 4686653
No 41
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=95.78 E-value=0.0017 Score=45.66 Aligned_cols=30 Identities=20% Similarity=0.294 Sum_probs=20.6
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
+.+-|..||..|.+...|.+|.+.+|..|.
T Consensus 55 k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~ 84 (85)
T 2lv2_A 55 QVFPCKYCPATFYSSPGLTRHINKCHPSEN 84 (85)
T ss_dssp SSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred CccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence 344477777777777777777777776653
No 42
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.78 E-value=0.0018 Score=36.25 Aligned_cols=29 Identities=10% Similarity=0.124 Sum_probs=23.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+...|..|.+ +|..|
T Consensus 7 ~k~~~C~~C~k~f~~~~~l~~H~~-~h~~~ 35 (37)
T 2elo_A 7 GRSYSCPVCEKSFSEDRLIKSHIK-TNHPE 35 (37)
T ss_dssp CCCCEETTTTEECSSHHHHHHHHH-HHCSS
T ss_pred CCCcCCCCCCCccCCHHHHHHHHH-HHcCC
Confidence 355779999999999999999975 46554
No 43
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.78 E-value=0.0022 Score=37.87 Aligned_cols=30 Identities=27% Similarity=0.345 Sum_probs=24.7
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2eoh_A 10 KKPYECKECRKTFIQIGHLNQHKR-VHTGER 39 (46)
T ss_dssp SCSCCCSSSCCCCSSHHHHHHHHH-HCSSCC
T ss_pred CCCcCCCCcCchhCCHHHHHHHHH-HhCCCC
Confidence 456779999999999999999964 676553
No 44
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=95.77 E-value=0.0018 Score=37.00 Aligned_cols=30 Identities=13% Similarity=0.218 Sum_probs=24.5
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|-+ +|..|+
T Consensus 4 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 33 (39)
T 1njq_A 4 PRSYTCSFCKREFRSAQALGGHMN-VHRRDR 33 (39)
T ss_dssp SSSEECTTTCCEESSHHHHHHHHH-TTCCSC
T ss_pred CCceECCCCCcccCCHHHHHHHHH-HcCCCc
Confidence 345779999999999999999954 676654
No 45
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.76 E-value=0.0022 Score=37.84 Aligned_cols=30 Identities=23% Similarity=0.335 Sum_probs=24.6
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k 39 (46)
T 2enh_A 10 EKPYECDVCRKAFSHHASLTQHQR-VHSGEK 39 (46)
T ss_dssp SSSCBCTTTCCBCSSSHHHHHHGG-GSCCSC
T ss_pred CCCcCCCCcCchhCCHHHHHHHHH-HhCCCC
Confidence 356789999999999999999965 676553
No 46
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=95.76 E-value=0.0034 Score=32.43 Aligned_cols=24 Identities=21% Similarity=0.242 Sum_probs=20.1
Q ss_pred hhhhhcCCCcCChhHHHHHHHhhhh
Q 037201 47 CLLIRNQGRFYNNDKLVNHFRQIHE 71 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFkqlHe 71 (177)
+-|..||+.|.+...|.+|.+ +|.
T Consensus 2 ~~C~~C~k~f~~~~~l~~H~~-~h~ 25 (27)
T 1znf_A 2 YKCGLCERSFVEKSALSRHQR-VHK 25 (27)
T ss_dssp CBCSSSCCBCSSHHHHHHHGG-GTC
T ss_pred ccCCCCCCcCCCHHHHHHHHH-HcC
Confidence 348999999999999999974 454
No 47
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.76 E-value=0.0018 Score=37.99 Aligned_cols=30 Identities=20% Similarity=0.154 Sum_probs=24.9
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k 39 (44)
T 2epv_A 10 EKPYECNECGKAFIWKSLLIVHER-THAGVS 39 (44)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHG-GGSSCS
T ss_pred CcCeECCCCCcccCchHHHHHHHh-HhcCCC
Confidence 456789999999999999999965 676653
No 48
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.75 E-value=0.0021 Score=37.80 Aligned_cols=30 Identities=23% Similarity=0.284 Sum_probs=24.9
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2eq1_A 10 EKPYKCNECGKAFRAHSNLTTHQV-IHTGEK 39 (46)
T ss_dssp SCCCCCTTTTCCCSSHHHHHHHHT-TTCCSC
T ss_pred CCCeECCcCChhhCCHHHHHHHHH-HhCCCC
Confidence 456889999999999999999965 676553
No 49
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.75 E-value=0.0016 Score=38.50 Aligned_cols=30 Identities=20% Similarity=0.213 Sum_probs=24.7
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2eoz_A 10 EKPYSCNVCGKAFVLSAHLNQHLR-VHTQET 39 (46)
T ss_dssp CCSEEETTTTEEESSHHHHHHHHH-HHSSCC
T ss_pred CCCeECcccChhhCCHHHHHHHHH-HhCCCC
Confidence 456789999999999999999964 576553
No 50
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.75 E-value=0.0028 Score=37.24 Aligned_cols=30 Identities=23% Similarity=0.313 Sum_probs=24.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2yu8_A 10 EKPYKCNECGKVFTQNSHLARHRR-VHTGGK 39 (46)
T ss_dssp CSSEECSSSCCEESSSHHHHHHTH-HHHSCC
T ss_pred CCCeECCcCCchhCCHHHHHHHHH-hcCCCC
Confidence 456789999999999999999964 676553
No 51
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.75 E-value=0.0013 Score=38.66 Aligned_cols=30 Identities=27% Similarity=0.375 Sum_probs=24.7
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|. ++|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k 39 (45)
T 2epu_A 10 QKPFECTHCGKSFRAKGNLVTHQ-RIHTGEK 39 (45)
T ss_dssp CCSEEETTTTEEESSHHHHHHHH-TTTSSCC
T ss_pred CcCccCCCCCCccCChHHHHHHH-HHhCCCC
Confidence 35577999999999999999995 4687653
No 52
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.75 E-value=0.002 Score=37.11 Aligned_cols=30 Identities=23% Similarity=0.256 Sum_probs=25.0
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|.+ +|..|+
T Consensus 9 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 38 (42)
T 2en2_A 9 EKPYKCETCGARFVQVAHLRAHVL-IHTGSG 38 (42)
T ss_dssp SCSEECTTTCCEESSHHHHHHHTH-HHHSCC
T ss_pred CCCEeCCCcChhhCCHHHHHHHHH-HcCCCC
Confidence 456779999999999999999975 776553
No 53
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.75 E-value=0.0027 Score=36.39 Aligned_cols=29 Identities=21% Similarity=0.371 Sum_probs=24.1
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+...|.+|.+ +|..|
T Consensus 8 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 36 (42)
T 2yte_A 8 EKPYSCAECKETFSDNNRLVQHQK-MHTVK 36 (42)
T ss_dssp CCSCBCTTTCCBCSSHHHHHHHHH-HTSCC
T ss_pred CCCeECCCCCCccCCHHHHHHHHH-HhCCC
Confidence 355779999999999999999965 57654
No 54
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.74 E-value=0.0026 Score=37.42 Aligned_cols=30 Identities=17% Similarity=0.173 Sum_probs=24.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|.+ +|..|+
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2eoq_A 10 EKPFKCDICGKSFCGRSRLNRHSM-VHTAEK 39 (46)
T ss_dssp SCSCCCSSSCCCCSSHHHHHHHHH-HTTCCC
T ss_pred CCCcCCCcCCchhCCHHHHHHHHH-HcCCCC
Confidence 456789999999999999999954 686653
No 55
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.74 E-value=0.0022 Score=37.91 Aligned_cols=30 Identities=20% Similarity=0.264 Sum_probs=24.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||..|.+...|.+|. ++|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k 39 (46)
T 2em6_A 10 EKCYKCDVCGKEFSQSSHLQTHQ-RVHTGEK 39 (46)
T ss_dssp CCCCBCSSSCCBCSSHHHHHHHH-TTTSSSC
T ss_pred CCCeECCCCCcccCCHHHHHHHH-HHcCCCC
Confidence 45578999999999999999995 5786653
No 56
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.74 E-value=0.0017 Score=36.94 Aligned_cols=29 Identities=14% Similarity=0.001 Sum_probs=24.4
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEG 72 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHer 72 (177)
++.+-|..||+.|.+...|..|-.++|..
T Consensus 7 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~ 35 (37)
T 2elm_A 7 GHLYYCSQCHYSSITKNCLKRHVIQKHSN 35 (37)
T ss_dssp SCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred CcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence 45677999999999999999996667754
No 57
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.73 E-value=0.0035 Score=36.84 Aligned_cols=30 Identities=23% Similarity=0.247 Sum_probs=24.7
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2emp_A 10 VKPYMCNECGKAFSVYSSLTTHQV-IHTGEK 39 (46)
T ss_dssp CCSEECSSSCCEESCHHHHHHHHH-HHHCCS
T ss_pred CcCeECCCCCchhCCHHHHHHHHH-HcCCCC
Confidence 456789999999999999999965 576553
No 58
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.73 E-value=0.0025 Score=37.62 Aligned_cols=30 Identities=17% Similarity=0.184 Sum_probs=24.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k 39 (46)
T 2eoo_A 10 ERPYGCNECGKNFGRHSHLIEHLK-RHFREK 39 (46)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHH-HHHSTT
T ss_pred CCCEEccccCcccCCHHHHHHHHH-HHcCCC
Confidence 456789999999999999999964 587653
No 59
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.71 E-value=0.0026 Score=36.84 Aligned_cols=30 Identities=20% Similarity=0.250 Sum_probs=24.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|. .+|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~ 39 (44)
T 2en7_A 10 MKPYVCNECGKAFRSKSYLIIHT-RTHTGES 39 (44)
T ss_dssp SSSSCCTTTCCCCSSHHHHHHHH-TTTCCSS
T ss_pred CcCeECCCCCCccCCHHHHHHHh-hhcCCCC
Confidence 45678999999999999999997 4676553
No 60
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.71 E-value=0.0024 Score=37.46 Aligned_cols=30 Identities=27% Similarity=0.385 Sum_probs=24.6
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||..|.+...|.+|.+ +|..|+
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2eor_A 10 EKPYNCEECGKAFIHDSQLQEHQR-IHTGEK 39 (46)
T ss_dssp CCSEECTTTCCEESSHHHHHHHHH-HHHSCC
T ss_pred CcCccCCCCCCCcCCHHHHHHHHH-hcCCCC
Confidence 456779999999999999999964 676553
No 61
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.70 E-value=0.0033 Score=36.98 Aligned_cols=30 Identities=23% Similarity=0.273 Sum_probs=24.7
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2eml_A 10 EKPYECSVCGKAFSHRQSLSVHQR-IHSGKK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHG-GGSSCC
T ss_pred CCCeeCCCcCCccCCHHHHHHHHH-HhcCCC
Confidence 456789999999999999999964 676553
No 62
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.66 E-value=0.003 Score=37.29 Aligned_cols=29 Identities=21% Similarity=0.173 Sum_probs=24.4
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+...|..|.+ +|..|
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2elz_A 10 EKPYKCEDCGKGYNRRLNLDMHQR-VHMGE 38 (46)
T ss_dssp CSSCBCSSSCCBCSSHHHHHHHGG-GGGSC
T ss_pred CCCeeCcccCchhCCHHHHHHHHH-hcCCC
Confidence 456789999999999999999965 67654
No 63
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.66 E-value=0.0029 Score=37.23 Aligned_cols=30 Identities=30% Similarity=0.330 Sum_probs=24.9
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2epz_A 10 EKPFDCIDCGKAFSDHIGLNQHRR-IHTGEK 39 (46)
T ss_dssp CCSBCCTTTCCCBSSHHHHHHHHT-TTTTCC
T ss_pred CCCeECCCCCceeCCHHHHHHHHH-HhCCCC
Confidence 456789999999999999999975 676553
No 64
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=95.65 E-value=0.0032 Score=34.03 Aligned_cols=28 Identities=18% Similarity=0.216 Sum_probs=22.6
Q ss_pred hhhhhh--hcCCCcCChhHHHHHHHhhhhhh
Q 037201 45 ENCLLI--RNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 45 r~~Lc~--~CGrrf~t~~~L~kHFkqlHerE 73 (177)
+.+.|. .||..|.+...|..|.+ +|..|
T Consensus 2 k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~ 31 (32)
T 1zfd_A 2 RPYSCDHPGCDKAFVRNHDLIRHKK-SHQEK 31 (32)
T ss_dssp CSBCCCCTTCCCCBSSSHHHHHHHG-GGTCC
T ss_pred CCCcCcCCCCCCccCCHHHHHHHHH-HccCC
Confidence 446688 89999999999999964 57654
No 65
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=95.64 E-value=0.0031 Score=32.98 Aligned_cols=23 Identities=13% Similarity=0.068 Sum_probs=20.1
Q ss_pred hhhhhhhcCCCcCChhHHHHHHH
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFR 67 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFk 67 (177)
+.+.|..||+.|.+...|..|.+
T Consensus 2 k~~~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvh_A 2 KPFSCSLCPQRSRDFSAMTKHLR 24 (27)
T ss_dssp CCEECSSSSCEESSHHHHHHHHH
T ss_pred cCccCCCcChhhCCHHHHHHHHH
Confidence 45679999999999999999964
No 66
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.62 E-value=0.003 Score=37.00 Aligned_cols=30 Identities=27% Similarity=0.325 Sum_probs=24.9
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2ep1_A 10 EKPYECSDCGKSFIKKSQLHVHQR-IHTGEN 39 (46)
T ss_dssp CCSSCCSSSCCCCSSHHHHHHHHG-GGSSSC
T ss_pred CCCcCCCCCCchhCCHHHHHHHHH-HhCCCC
Confidence 455789999999999999999975 576653
No 67
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.61 E-value=0.0034 Score=36.78 Aligned_cols=30 Identities=20% Similarity=0.196 Sum_probs=24.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|. ++|..|+
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k 39 (46)
T 2en8_A 10 EKSHTCDECGKNFCYISALRIHQ-RVHMGEK 39 (46)
T ss_dssp CSSEECTTTCCEESSHHHHHHHH-TTTCCSC
T ss_pred CCCeECCCcCcccCCHHHHHHHH-HHhCCCC
Confidence 45678999999999999999996 5676553
No 68
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=95.60 E-value=0.0036 Score=32.38 Aligned_cols=26 Identities=19% Similarity=0.284 Sum_probs=21.8
Q ss_pred hhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 47 CLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
+.|..||..|.+...|..|-+ +|..|
T Consensus 3 ~~C~~C~~~f~~~~~l~~H~~-~h~~~ 28 (29)
T 2m0e_A 3 HKCPHCDKKFNQVGNLKAHLK-IHIAD 28 (29)
T ss_dssp CCCSSCCCCCCTTTHHHHHHH-HHHSC
T ss_pred CcCCCCCcccCCHHHHHHHHH-HhccC
Confidence 559999999999999999964 57654
No 69
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.60 E-value=0.0024 Score=37.71 Aligned_cols=30 Identities=27% Similarity=0.351 Sum_probs=24.5
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2em4_A 10 QRPYECIECGKAFKTKSSLICHRR-SHTGEK 39 (46)
T ss_dssp SSSEECSSSCCEESSHHHHHHHHH-HHSSSS
T ss_pred CcCcCCCCCCCccCCHHHHHHHHH-hcCCCC
Confidence 355779999999999999999964 676553
No 70
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=95.59 E-value=0.0026 Score=37.51 Aligned_cols=30 Identities=27% Similarity=0.350 Sum_probs=24.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||..|.+...|.+|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k 39 (46)
T 2emj_A 10 EKPFECAECGKSFSISSQLATHQR-IHTGEK 39 (46)
T ss_dssp CCSEECSSSSCEESSHHHHHHHHH-HHTTSC
T ss_pred CCCEECCCCCcccCCHHHHHHHHH-HhCCCC
Confidence 455779999999999999999965 676553
No 71
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=95.57 E-value=0.0023 Score=37.74 Aligned_cols=30 Identities=17% Similarity=0.207 Sum_probs=24.7
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|. ++|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~ 39 (46)
T 2el6_A 10 VNPYKCSQCEKSFSGKLRLLVHQ-RMHTREK 39 (46)
T ss_dssp CCSEECSSSSCEESSHHHHHHHH-GGGCCSS
T ss_pred CCCeECCCCCcccCCHHHHHHHH-HHcCCCC
Confidence 45577999999999999999995 5686653
No 72
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.57 E-value=0.0041 Score=36.38 Aligned_cols=30 Identities=13% Similarity=0.141 Sum_probs=24.6
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||..|.+...|..|.+ +|..|+
T Consensus 8 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 37 (43)
T 2yrm_A 8 NGAFFCNECDCRFSEEASLKRHTL-QTHSDK 37 (43)
T ss_dssp SCCBCCSSSCCCBSSHHHHHHHHH-HHTCTT
T ss_pred CCCEECCCCCCeeCChHHHHHHHH-hhCCCC
Confidence 455779999999999999999964 576553
No 73
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.56 E-value=0.003 Score=37.14 Aligned_cols=30 Identities=23% Similarity=0.433 Sum_probs=24.9
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k 39 (46)
T 2emh_A 10 ERPYICTVCGKAFTDRSNLIKHQK-IHTGEK 39 (46)
T ss_dssp CCSEECTTTCCEESSHHHHHHHHH-HHHCSS
T ss_pred CCCcCCCCCCchhCCHHHHHHHHH-hcCCCC
Confidence 456789999999999999999965 676553
No 74
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=95.56 E-value=0.0044 Score=32.13 Aligned_cols=26 Identities=31% Similarity=0.432 Sum_probs=21.8
Q ss_pred hhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 47 CLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
+.|..||..|.+...|..|.+ +|..|
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~-~H~~~ 28 (29)
T 2m0f_A 3 LKCRECGKQFTTSGNLKRHLR-IHSGE 28 (29)
T ss_dssp EECTTTSCEESCHHHHHHHHH-HHHTC
T ss_pred ccCCCCCCccCChhHHHHHHH-HhcCC
Confidence 559999999999999999964 57654
No 75
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.56 E-value=0.0025 Score=37.75 Aligned_cols=30 Identities=23% Similarity=0.321 Sum_probs=24.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2eon_A 10 EKPYKCQVCGKAFRVSSHLVQHHS-VHSGER 39 (46)
T ss_dssp CCSCBCSSSCCBCSSHHHHHHHTT-TTTSCC
T ss_pred CcccCCCCCCcccCcHHHHHHHHH-hcCCCC
Confidence 456789999999999999999964 676553
No 76
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.56 E-value=0.0031 Score=37.09 Aligned_cols=30 Identities=27% Similarity=0.356 Sum_probs=24.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2eq2_A 10 GKPYQCNECGKAFSQTSKLARHQR-VHTGEK 39 (46)
T ss_dssp SCSSSCCSSCCCCSSHHHHHHHGG-GGCCCC
T ss_pred CCCeECCCCCcccCCHHHHHHHHH-HcCCCC
Confidence 456789999999999999999964 676553
No 77
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.53 E-value=0.0019 Score=37.11 Aligned_cols=29 Identities=21% Similarity=0.203 Sum_probs=24.0
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+-|..||+.|.+...|..|. .+|..|
T Consensus 8 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~ 36 (41)
T 2ept_A 8 QRVYECQECGKSFRQKGSLTLHE-RIHTGS 36 (41)
T ss_dssp CCCEECSSSCCEESSHHHHHHHG-GGCCCC
T ss_pred CCCeECCCCCCCcCCHHHHHHHH-HHhCCC
Confidence 35577999999999999999995 467655
No 78
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=95.53 E-value=0.0025 Score=37.40 Aligned_cols=30 Identities=20% Similarity=0.248 Sum_probs=24.6
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|. ++|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~ 39 (46)
T 2em9_A 10 EKPYNCKECGKSFRWASCLLKHQ-RVHSGEK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHG-GGGTSCC
T ss_pred CcCeECCccccccCChHHHHHHH-HHhCCCC
Confidence 45678999999999999999996 4576553
No 79
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.51 E-value=0.0027 Score=37.18 Aligned_cols=30 Identities=20% Similarity=0.199 Sum_probs=24.9
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||..|.+...|.+|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2eow_A 10 EKPYKCNECGKAFRARSSLAIHQA-THSGEK 39 (46)
T ss_dssp CCCEECTTSCCEESSHHHHHHHHH-HHCCCS
T ss_pred CCCeeccccCChhcCHHHHHHHHH-HcCCCC
Confidence 456789999999999999999975 676553
No 80
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.50 E-value=0.0045 Score=36.58 Aligned_cols=30 Identities=20% Similarity=0.348 Sum_probs=24.7
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2ytm_A 10 EKPYKCMECGKAFGDNSSCTQHQR-LHTGQR 39 (46)
T ss_dssp CCSSSBTTTTBCCSSHHHHHHHHH-HHHSCC
T ss_pred CCCcCCCCCCchhCCHHHHHHHHH-HcCCCC
Confidence 456789999999999999999975 576553
No 81
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=95.50 E-value=0.0026 Score=36.49 Aligned_cols=29 Identities=17% Similarity=0.091 Sum_probs=24.0
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||..|.+...|..|.+ +|..|
T Consensus 9 ~~~~~C~~C~k~f~~~~~l~~H~~-~H~~~ 37 (42)
T 2epc_A 9 ETPYLCGQCGKSFTQRGSLAVHQR-SCSQS 37 (42)
T ss_dssp SCCEECSSSCCEESSHHHHHHHHH-HTTCC
T ss_pred CCCeECCCCCcccCCHHHHHHHhh-hcCCC
Confidence 355779999999999999999964 67655
No 82
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.50 E-value=0.0023 Score=37.66 Aligned_cols=30 Identities=27% Similarity=0.373 Sum_probs=24.7
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2enc_A 10 EKPFKCEECGKGFYTNSQCYSHQR-SHSGEK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHH-HSCCSS
T ss_pred CCCcCCCCCCCcCCChHHHHHHHH-HhCCCC
Confidence 456789999999999999999964 676553
No 83
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=94.46 E-value=0.0024 Score=33.13 Aligned_cols=22 Identities=32% Similarity=0.468 Sum_probs=19.3
Q ss_pred hhhhhhcCCCcCChhHHHHHHH
Q 037201 46 NCLLIRNQGRFYNNDKLVNHFR 67 (177)
Q Consensus 46 ~~Lc~~CGrrf~t~~~L~kHFk 67 (177)
.+.|..||+.|.+...|..|-+
T Consensus 2 p~~C~~C~k~f~~~~~l~~H~~ 23 (26)
T 2lvu_A 2 PYVCERCGKRFVQSSQLANHIR 23 (26)
Confidence 3569999999999999999954
No 84
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.47 E-value=0.0035 Score=36.68 Aligned_cols=29 Identities=24% Similarity=0.264 Sum_probs=24.2
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+...|..|.+ +|..|
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2eq4_A 10 EKLYNCKECGKSFSRAPCLLKHER-LHSGE 38 (46)
T ss_dssp CCCCCBTTTTBCCSCHHHHHHHHH-HCCSS
T ss_pred CCCeECCCCCCccCchHHHHHHHH-hcCCC
Confidence 355779999999999999999964 57655
No 85
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.47 E-value=0.0035 Score=40.60 Aligned_cols=31 Identities=16% Similarity=0.023 Sum_probs=26.5
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+-|..||..|.+...|.+|.+..|..++
T Consensus 36 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~ 66 (78)
T 2d9h_A 36 ALRFPCEFCGKRFEKPDSVAAHRSKSHPALL 66 (78)
T ss_dssp TCCEECTTTCCEESSHHHHHHHHHHTSTTTS
T ss_pred CcccCCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence 4567799999999999999999999998765
No 86
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=95.46 E-value=0.0037 Score=38.39 Aligned_cols=30 Identities=7% Similarity=0.022 Sum_probs=25.0
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+-|..||..|.+...|..|.+ +|..|+
T Consensus 22 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 51 (54)
T 1yui_A 22 EQPATCPICYAVIRQSRNLRRHLE-LRHFAK 51 (54)
T ss_dssp SCCEECTTTCCEESSHHHHHHHHH-HHTTTS
T ss_pred CCCccCCCCCcccCCHHHHHHHHH-HhccCC
Confidence 455679999999999999999975 677653
No 87
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.46 E-value=0.003 Score=37.26 Aligned_cols=30 Identities=23% Similarity=0.316 Sum_probs=24.6
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2ytq_A 10 EKPYGCSECGKAFSSKSYLIIHMR-THSGEK 39 (46)
T ss_dssp CCSCBCSSSCCBCSCHHHHHHHHT-TTCCSC
T ss_pred CCCcCCCccChhhCChHHHHHHHH-HhCCCC
Confidence 456789999999999999999964 576553
No 88
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.46 E-value=0.0022 Score=37.27 Aligned_cols=29 Identities=24% Similarity=0.352 Sum_probs=24.1
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+...|..|.+ +|..|
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (44)
T 2eoj_A 10 ENPYECCECGKVFSRKDQLVSHQK-THSGQ 38 (44)
T ss_dssp CCSCEETTTTEECSSHHHHHHHHT-TSSSS
T ss_pred CcCeeCCCCCCccCCHHHHHHHHH-HcCCC
Confidence 356789999999999999999964 57654
No 89
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.44 E-value=0.0041 Score=36.42 Aligned_cols=30 Identities=30% Similarity=0.350 Sum_probs=24.6
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|.+ +|..|+
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2eop_A 10 EKPHECRECGKSFSFNSQLIVHQR-IHTGEN 39 (46)
T ss_dssp CCSCBCTTTCCBCSSHHHHHHHHT-TTTTSC
T ss_pred CCCeeCCCCCchhCCHHHHHHHHH-HcCCCC
Confidence 456789999999999999999964 576553
No 90
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.44 E-value=0.0027 Score=37.22 Aligned_cols=30 Identities=27% Similarity=0.390 Sum_probs=24.5
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||..|.+...|.+|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2emm_A 10 ERPHKCNECGKSFIQSAHLIQHQR-IHTGEK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHH-HHSCCC
T ss_pred CCCeeCCCCChhhCCHHHHHHHHH-HhCCCC
Confidence 355779999999999999999964 576553
No 91
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=95.44 E-value=0.0024 Score=39.28 Aligned_cols=29 Identities=24% Similarity=0.308 Sum_probs=24.6
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
+.+.|..||..|.+...|.+|.+.+|..+
T Consensus 29 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~ 57 (60)
T 2adr_A 29 KPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57 (60)
T ss_dssp CSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred CCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence 44669999999999999999998888754
No 92
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.43 E-value=0.0024 Score=37.59 Aligned_cols=30 Identities=23% Similarity=0.255 Sum_probs=24.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|. ++|..|+
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k 39 (46)
T 2ep0_A 10 EKPYKCDVCHKSFRYGSSLTVHQ-RIHTGEK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHH-TTTSSSC
T ss_pred CCCeeCcccCcccCChHHHHHHH-HHhCCCC
Confidence 45677999999999999999995 4687653
No 93
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=95.42 E-value=0.0028 Score=36.49 Aligned_cols=29 Identities=24% Similarity=0.368 Sum_probs=24.0
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+...|..|. ++|..|
T Consensus 8 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~ 36 (42)
T 2el5_A 8 ENPYECSECGKAFNRKDQLISHQ-RTHAGE 36 (42)
T ss_dssp CCSEECSSSCCEESSHHHHHHHH-GGGCCC
T ss_pred CCCccCCCcChhhCCHHHHHHHH-HhcCCC
Confidence 35577999999999999999996 457655
No 94
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=95.42 E-value=0.0036 Score=41.36 Aligned_cols=29 Identities=10% Similarity=0.187 Sum_probs=18.7
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||..|.+...|.+|-+ +|..|
T Consensus 30 ekp~~C~~C~k~F~~~~~L~~H~~-~Htge 58 (60)
T 4gzn_C 30 YRPRSCPECGKCFRDQSEVNRHLK-VHQNK 58 (60)
T ss_dssp CCCEECTTTCCEESSHHHHHHHGG-GGSCC
T ss_pred CcCeECCCCCCCcCCHHHHHHHhC-ccCCC
Confidence 344457777777777777777753 56554
No 95
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=95.42 E-value=0.0039 Score=36.78 Aligned_cols=30 Identities=20% Similarity=0.336 Sum_probs=24.9
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2ely_A 10 EKPFKCVECGKGFSRRSALNVHHK-LHTGEK 39 (46)
T ss_dssp CCSBCCSSSCCCBSSTTHHHHHHH-HHSCCS
T ss_pred CCCcccCccCcccCCHHHHHHHHH-HcCCCC
Confidence 456789999999999999999975 576553
No 96
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.40 E-value=0.0031 Score=37.08 Aligned_cols=30 Identities=33% Similarity=0.484 Sum_probs=24.9
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|.+ +|..|+
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2ytk_A 10 EKPYKCNECGKVFTQNSHLTNHWR-IHTGEK 39 (46)
T ss_dssp SCSEECSSSCCEESSHHHHHHHHH-HHSSSS
T ss_pred CCCEeCCcCCCccCCHHHHHHHHH-HHCCCC
Confidence 456789999999999999999975 676553
No 97
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.39 E-value=0.0032 Score=36.71 Aligned_cols=30 Identities=17% Similarity=0.140 Sum_probs=24.6
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|.+ +|..|+
T Consensus 8 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 37 (44)
T 2emx_A 8 EKPFGCSCCEKAFSSKSYLLVHQQ-THAEEK 37 (44)
T ss_dssp CCCEECSSSSCEESSHHHHHHHHH-HHTSSC
T ss_pred CcCccCCCCCcccCCHHHHHHHHH-HhCCCC
Confidence 455779999999999999999965 576553
No 98
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.39 E-value=0.0024 Score=37.71 Aligned_cols=29 Identities=28% Similarity=0.366 Sum_probs=24.3
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+...|..|.+ +|..|
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2ytp_A 10 ERHYECSECGKAFARKSTLIMHQR-IHTGE 38 (46)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHT-TTSCC
T ss_pred CCCeECCcCCcccCCHHHHHHHHH-HhCCC
Confidence 456789999999999999999965 67655
No 99
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.39 E-value=0.0031 Score=37.10 Aligned_cols=30 Identities=20% Similarity=0.232 Sum_probs=24.7
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|. ++|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~ 39 (46)
T 2ytd_A 10 EKPYKCSECGKAFHRHTHLNEHR-RIHTGYR 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHH-HHHTCCC
T ss_pred CcCeECCCCCCeeCChHHHHHHH-HHcCCCC
Confidence 35678999999999999999995 5686653
No 100
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.38 E-value=0.0025 Score=37.16 Aligned_cols=29 Identities=21% Similarity=0.237 Sum_probs=24.2
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+-|..||+.|.+...|..|.+ +|..|
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (44)
T 2yu5_A 10 ENPFKCSKCDRVFTQRNYLVQHER-THARK 38 (44)
T ss_dssp CCSEECSSSSCEESSSHHHHHHHH-HCCCC
T ss_pred CCCeECCCCCchhCCHHHHHHHhH-hcCCC
Confidence 456779999999999999999965 57655
No 101
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.36 E-value=0.0026 Score=37.55 Aligned_cols=30 Identities=23% Similarity=0.271 Sum_probs=24.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|. ++|..|+
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~ 39 (46)
T 2em5_A 10 TKSHQCHECGRGFTLKSHLNQHQ-RIHTGEK 39 (46)
T ss_dssp SCSEECSSSCCEESSHHHHHHHH-TTTSCSC
T ss_pred CCCeECCcCCCccCCHHHHHHHH-HHhCCCC
Confidence 45678999999999999999996 5686553
No 102
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.34 E-value=0.0029 Score=36.51 Aligned_cols=29 Identities=28% Similarity=0.345 Sum_probs=24.0
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+-|..||+.|.+...|.+|.+ +|..|
T Consensus 9 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 37 (42)
T 2eos_A 9 EKPYPCEICGTRFRHLQTLKSHLR-IHTGS 37 (42)
T ss_dssp SCCBCCSSSCCCBSSHHHHHHHTT-TTSCC
T ss_pred CCCEECCCCCCccCCHHHHHHHHH-hcCCC
Confidence 456779999999999999999965 67654
No 103
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.33 E-value=0.0028 Score=37.16 Aligned_cols=30 Identities=23% Similarity=0.365 Sum_probs=24.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||..|.+...|..|. .+|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~ 39 (46)
T 2yts_A 10 EKPYICNECGKSFIQKSHLNRHR-RIHTGEK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHG-GGTSSCC
T ss_pred CcCEECCCCChhhCChHHHHHHH-HhcCCCC
Confidence 45678999999999999999996 4676553
No 104
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.32 E-value=0.0037 Score=36.73 Aligned_cols=29 Identities=24% Similarity=0.308 Sum_probs=24.2
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+...|..|.+ +|..|
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2emy_A 10 ENPYECHECGKAFSRKYQLISHQR-THAGE 38 (46)
T ss_dssp SCCEECSSSCCEESSHHHHHHHHH-HHTTS
T ss_pred CcCcCCCCCCcccCcHHHHHHHHH-HcCCC
Confidence 355789999999999999999965 57655
No 105
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.26 E-value=0.0032 Score=37.01 Aligned_cols=30 Identities=17% Similarity=0.305 Sum_probs=24.9
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2ytj_A 10 EKPYICAECGKAFTIRSNLIKHQK-IHTKQK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHH-HTSCCC
T ss_pred CcCeECCCCChhhCCHHHHHHHHH-HcCCCC
Confidence 456789999999999999999974 676553
No 106
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.26 E-value=0.0028 Score=37.12 Aligned_cols=30 Identities=23% Similarity=0.298 Sum_probs=24.7
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||..|.+...|.+|. ++|..|+
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k 39 (46)
T 2yrj_A 10 EKPYRCGECGKAFAQKANLTQHQ-RIHTGEK 39 (46)
T ss_dssp CCCEECSSSCCEESSHHHHHHHH-TTTSSCC
T ss_pred CCCeECCCCCCccCCHHHHHHHH-HHcCCCC
Confidence 45678999999999999999996 4676553
No 107
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.24 E-value=0.0029 Score=37.21 Aligned_cols=29 Identities=31% Similarity=0.337 Sum_probs=24.3
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+...|.+|.+ +|..|
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2ene_A 10 EKPYKCNECGKVFRHNSYLSRHQR-IHTGE 38 (46)
T ss_dssp SSSEECSSSCCEESSHHHHHHHHT-TTCCC
T ss_pred CCCeECCCCCchhCChHHHHHHHh-hcCCC
Confidence 456789999999999999999965 57655
No 108
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.23 E-value=0.0039 Score=36.74 Aligned_cols=30 Identities=20% Similarity=0.256 Sum_probs=24.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2em8_A 10 EKPYKCVECGKGYKRRLDLDFHQR-VHTGEK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHH-HHHCCC
T ss_pred CCCeECcccCchhCCHHHHHHHHH-HHcCCC
Confidence 456789999999999999999975 576553
No 109
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=95.23 E-value=0.0045 Score=36.36 Aligned_cols=30 Identities=20% Similarity=0.195 Sum_probs=24.7
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~~ 39 (46)
T 2em0_A 10 EKTWKCRECDMCFSQASSLRLHQN-VHVGEK 39 (46)
T ss_dssp CCCCCCSSSCCCCSSHHHHHHHGG-GGSSSS
T ss_pred CcCeECCCCCcccCCHHHHHHHHH-HcCCCC
Confidence 455789999999999999999965 576553
No 110
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.17 E-value=0.0036 Score=36.91 Aligned_cols=30 Identities=30% Similarity=0.409 Sum_probs=24.5
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2em2_A 10 EKPFKCKECGKAFRQNIHLASHLR-IHTGEK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHH-HHCCCC
T ss_pred CCCEECCcCCchhCCHHHHHHHHH-HhCCCC
Confidence 355779999999999999999965 576553
No 111
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.16 E-value=0.0035 Score=36.83 Aligned_cols=30 Identities=23% Similarity=0.262 Sum_probs=24.9
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2ep2_A 10 EKPYECSICGKSFTKKSQLHVHQQ-IHTGEK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHH-TTSSCC
T ss_pred CcCcCCCCCCcccCCHHHHHHHHH-HhCCCC
Confidence 456789999999999999999975 676553
No 112
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.16 E-value=0.0033 Score=37.10 Aligned_cols=29 Identities=24% Similarity=0.292 Sum_probs=24.3
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+...|.+|.+ +|..|
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2emf_A 10 GKHFECTECGKAFTRKSTLSMHQK-IHTGE 38 (46)
T ss_dssp SCCEECSSSCCEESCHHHHHHHGG-GTSCS
T ss_pred CCCeECCCCCchhCCHHHHHHHHH-HhCCC
Confidence 455789999999999999999975 57655
No 113
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.14 E-value=0.0037 Score=35.83 Aligned_cols=29 Identities=21% Similarity=0.343 Sum_probs=24.0
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||..|.+...|..|.+ +|..|
T Consensus 9 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 37 (42)
T 2ytb_A 9 EKPYRCDQCGKAFSQKGSLIVHIR-VHTGS 37 (42)
T ss_dssp CCSBCCTTTTCCBSSHHHHHTTGG-GTSCC
T ss_pred CCCeeCCCccchhCCHHHHHHHHH-HhCCC
Confidence 455779999999999999999964 57554
No 114
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.12 E-value=0.0034 Score=36.75 Aligned_cols=30 Identities=27% Similarity=0.361 Sum_probs=24.6
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|..|.+ +|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2ytf_A 10 EKPFECSECQKAFNTKSNLIVHQR-THTGEK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHH-TSCSSS
T ss_pred CCCcCCCCCCcccCCHHHHHHHHH-HhCCCC
Confidence 456789999999999999999964 676553
No 115
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.12 E-value=0.0039 Score=36.63 Aligned_cols=29 Identities=21% Similarity=0.261 Sum_probs=24.4
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||..|.+...|..|.+ +|..|
T Consensus 10 ~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2em3_A 10 EKPYECKVCSKAFTQKAHLAQHQK-THTGE 38 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHH-HHCCC
T ss_pred CcCeECCCCCcccCCHHHHHHHHH-HhCCC
Confidence 456789999999999999999975 57655
No 116
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=95.11 E-value=0.0044 Score=32.36 Aligned_cols=23 Identities=17% Similarity=0.210 Sum_probs=20.0
Q ss_pred hhhhhhhcCCCcCChhHHHHHHH
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFR 67 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFk 67 (177)
+.+-|..||+.|.+...|..|.+
T Consensus 2 k~~~C~~C~k~f~~~~~l~~H~~ 24 (28)
T 2kvf_A 2 RPYSCSVCGKRFSLKHQMETHYR 24 (28)
T ss_dssp CSEECSSSCCEESCHHHHHHHHT
T ss_pred cCccCCCCCcccCCHHHHHHHHH
Confidence 34669999999999999999964
No 117
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.11 E-value=0.0044 Score=36.40 Aligned_cols=29 Identities=17% Similarity=0.278 Sum_probs=23.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+...|..|.+ +|..|
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2yso_A 10 EKSHQCRECGEIFFQYVSLIEHQV-LHMGQ 38 (46)
T ss_dssp CCCEECTTTCCEESSHHHHHHHHH-HHSCC
T ss_pred CCCEEccccChhhCCHHHHHHHHH-HhCCC
Confidence 355779999999999999999964 57554
No 118
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.11 E-value=0.0038 Score=36.33 Aligned_cols=29 Identities=17% Similarity=0.306 Sum_probs=24.2
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+-|..||+.|.+...|..|.+ +|..|
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (44)
T 2emb_A 10 RKRYECSKCQATFNLRKHLIQHQK-THAAK 38 (44)
T ss_dssp CSSEECTTTCCEESCHHHHHHHGG-GGCCC
T ss_pred CCCeECCCCCCccCCHHHHHHHHH-HcCCC
Confidence 355779999999999999999975 67655
No 119
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.11 E-value=0.0042 Score=36.37 Aligned_cols=30 Identities=27% Similarity=0.320 Sum_probs=24.9
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||..|.+...|.+|. ++|..|+
T Consensus 10 ~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~~ 39 (46)
T 2eoe_A 10 EKPYKCNECGKVFTQNSHLANHQ-RIHTGVK 39 (46)
T ss_dssp CCSSEETTTTEECSSHHHHHHHH-GGGSCCC
T ss_pred CCCeECCCcChhhCCHHHHHHHH-HHcCCCC
Confidence 45678999999999999999996 4676553
No 120
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.10 E-value=0.0052 Score=35.51 Aligned_cols=29 Identities=28% Similarity=0.331 Sum_probs=24.4
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||..|.+...|..|.+ +|..|
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (44)
T 2eof_A 10 EKPYECNECQKAFNTKSNLMVHQR-THTGE 38 (44)
T ss_dssp CCSEECTTTCCEESCHHHHHHHHH-HTTTS
T ss_pred CCCeECCCCCcccCCHhHHHHHHH-HhCCC
Confidence 355779999999999999999975 57655
No 121
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.10 E-value=0.004 Score=36.43 Aligned_cols=30 Identities=27% Similarity=0.304 Sum_probs=24.7
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||..|.+...|..|. ++|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~ 39 (46)
T 2eme_A 10 EKPYVCDYCGKAFGLSAELVRHQ-RIHTGEK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHH-GGGCCCS
T ss_pred CCCeECCCCChhhCCHHHHHHHH-HhcCCCC
Confidence 35578999999999999999997 4676553
No 122
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=95.05 E-value=0.0045 Score=40.87 Aligned_cols=30 Identities=17% Similarity=0.152 Sum_probs=26.5
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
|+++.|..||+.|.+...|.+|-+ +|..|+
T Consensus 2 EKpy~C~~C~k~F~~~~~L~~H~~-~Ht~ek 31 (60)
T 4gzn_C 2 ERPFFCNFCGKTYRDASGLSRHRR-AHLGYR 31 (60)
T ss_dssp CCCEECTTTCCEESSHHHHHHHHH-HHHTCC
T ss_pred CCCccCCCCCCEeCCHHHHHHHHH-HhCCCc
Confidence 677889999999999999999974 798775
No 123
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=95.01 E-value=0.0045 Score=32.67 Aligned_cols=23 Identities=9% Similarity=-0.049 Sum_probs=20.0
Q ss_pred hhhhhhhcCCCcCChhHHHHHHH
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFR 67 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFk 67 (177)
+.+-|..||+.|.....|.+|-+
T Consensus 2 k~~~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvg_A 2 APYRCPLCRAGCPSLASMQAHMR 24 (27)
T ss_dssp CTEEETTTTEEESCHHHHHHHHT
T ss_pred cCcCCCCCCcccCCHHHHHHHHH
Confidence 44679999999999999999963
No 124
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.96 E-value=0.0041 Score=36.41 Aligned_cols=29 Identities=21% Similarity=0.343 Sum_probs=24.3
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+...|.+|.+ +|..|
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2epw_A 10 EKPCKCTECGKAFCWKSQLIMHQR-THVDD 38 (46)
T ss_dssp CCSEECSSSCCEESSSHHHHHHHH-HCCSC
T ss_pred CCCeeCCCCCCccCCHHHHHHHHH-HhCCC
Confidence 355789999999999999999975 57655
No 125
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.94 E-value=0.0039 Score=36.76 Aligned_cols=28 Identities=18% Similarity=0.175 Sum_probs=23.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEG 72 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHer 72 (177)
++.+.|..||+.|.+...|..|. .+|..
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~ 37 (46)
T 2eoy_A 10 EKCFKCNKCEKTFSCSKYLTQHE-RIHTR 37 (46)
T ss_dssp SCCEECSSSCCEESSSHHHHHHH-TTCCS
T ss_pred CCCEECcCCCCcCCCHHHHHHHH-HHcCC
Confidence 45678999999999999999996 56765
No 126
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.91 E-value=0.0039 Score=36.52 Aligned_cols=29 Identities=21% Similarity=0.228 Sum_probs=24.2
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||..|.+...|.+|.+ +|..|
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2eq3_A 10 EKPYECNQCGKAFSVRSSLTTHQA-IHTGK 38 (46)
T ss_dssp CCSSEETTTTEECSSHHHHHHHHT-TSCCC
T ss_pred CCCeECCCCChhhCCHHHHHHHHH-HhCCC
Confidence 455779999999999999999964 67654
No 127
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=94.89 E-value=0.0042 Score=36.34 Aligned_cols=30 Identities=17% Similarity=0.153 Sum_probs=24.6
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.+...|.+|. .+|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k 39 (46)
T 2el4_A 10 VKPYGCSQCAKTFSLKSQLIVHQ-RSHTGVK 39 (46)
T ss_dssp CCSEECSSSSCEESSHHHHHHHG-GGSSSCC
T ss_pred CCceECCCCCchhCCHHHHHHHH-HHhCCCC
Confidence 45578999999999999999996 4576553
No 128
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.89 E-value=0.0037 Score=36.75 Aligned_cols=29 Identities=17% Similarity=0.233 Sum_probs=24.4
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||..|.+...|..|. ++|..|
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~ 38 (46)
T 2ytg_A 10 EKPFKCGECGKSYNQRVHLTQHQ-RVHTGE 38 (46)
T ss_dssp CCSEECTTTCCEESSSHHHHTTG-GGGSSC
T ss_pred CCCeECCCCCcccCCHHHHHHHH-HHcCCC
Confidence 45678999999999999999996 567655
No 129
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.79 E-value=0.005 Score=36.13 Aligned_cols=29 Identities=24% Similarity=0.231 Sum_probs=24.2
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+...|..|.+ +|..|
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2en6_A 10 EKPYGCNECGKTFSQKSILSAHQR-THTGE 38 (46)
T ss_dssp SCCEEETTTTEEESSHHHHHHHHH-HHSSC
T ss_pred CcCeECCCCCcccCchHHHHHHHH-HcCCC
Confidence 355779999999999999999976 47654
No 130
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.79 E-value=0.0037 Score=36.72 Aligned_cols=29 Identities=17% Similarity=0.213 Sum_probs=24.1
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+...|..|.+ +|..|
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2ysp_A 10 EKPYKCEKCGKGYNSKFNLDMHQK-VHTGE 38 (46)
T ss_dssp CCSEEETTTTEEESCHHHHHHHHT-TSCSC
T ss_pred CCCeECCCCCCccCCHHHHHHHHH-hhCCC
Confidence 355779999999999999999965 57654
No 131
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=94.77 E-value=0.09 Score=41.68 Aligned_cols=82 Identities=24% Similarity=0.303 Sum_probs=62.8
Q ss_pred hHHHHHHHHhhcC------CCC---CCC--------chHHhhhhcEEEEEe--------------ecceEEEEeCC---C
Q 037201 88 MEKYKMAVSAILT------PKV---GYG--------FADELKRAWFCVRNV--------------RFGCLMVVSDD---S 133 (177)
Q Consensus 88 ~~KY~~Aar~vl~------pkv---gyg--------La~eLrRAGv~Vr~V--------------~v~clvLVSDd---s 133 (177)
.+..++++..+.. .++ |.| ++..|.+.|+.+..+ .-|++|++|-. .
T Consensus 41 ~~~i~~~~~~i~~~a~~~a~~I~i~G~G~S~~~A~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~DlvI~iS~SG~t~ 120 (220)
T 3etn_A 41 TDAYEKAVELIVEQIHRKKGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTR 120 (220)
T ss_dssp CTHHHHHHHHHHHHTTTTCCCEEEECSHHHHHHHHHHHHHHHHTTCCEEECCTTGGGBTGGGGCCTTCEEEEECSSSCCH
T ss_pred HHHHHHHHHHHHhHhhccCCEEEEEEecHHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhhhccCCCCCEEEEEcCCCCCH
Confidence 4667778777765 333 666 455688899988876 34678888764 3
Q ss_pred chHHHHHHHHH--cCccEEEEecCCchhhhhhhccccc
Q 037201 134 NFVEVFQEATL--RCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 134 df~~~lr~Ar~--r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
+..++++.|++ +|.++|.|-+..+..|.+.||..+.
T Consensus 121 ~~i~~~~~ak~~~~Ga~vI~IT~~~~s~La~~aD~~l~ 158 (220)
T 3etn_A 121 EIVELTQLAHNLNPGLKFIVITGNPDSPLASESDVCLS 158 (220)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHSSEEEE
T ss_pred HHHHHHHHHHhcCCCCeEEEEECCCCChhHHhCCEEEE
Confidence 55677788999 9999999999888899999998765
No 132
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.76 E-value=0.0068 Score=39.27 Aligned_cols=28 Identities=18% Similarity=0.160 Sum_probs=20.5
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHhhhhh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQIHEG 72 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkqlHer 72 (177)
+.+.|..||..|.+...|..|.++.|..
T Consensus 14 k~~~C~~C~k~f~~~~~L~~H~~~~h~~ 41 (77)
T 2ct1_A 14 KPYECYICHARFTQSGTMKMHILQKHTE 41 (77)
T ss_dssp CSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred CCeECCCcCchhCCHHHHHHHHHHhcCC
Confidence 4466777888888877887777777754
No 133
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.68 E-value=0.0036 Score=36.44 Aligned_cols=29 Identities=17% Similarity=0.111 Sum_probs=24.1
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||..|.+...|.+|.+ +|..|
T Consensus 10 ~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~ 38 (44)
T 2eox_A 10 SKSYNCNECGKAFTRIFHLTRHQK-IHTRK 38 (44)
T ss_dssp CCCEEETTTTEEESSSHHHHTTHH-HHCCC
T ss_pred CCCeECcccCcccCCHHHHHHHHH-HhCCC
Confidence 355779999999999999999975 57654
No 134
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.65 E-value=0.0085 Score=39.61 Aligned_cols=29 Identities=24% Similarity=0.391 Sum_probs=21.7
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
..+.|..||..|.+...|..|.+++|..+
T Consensus 64 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~ 92 (95)
T 2yt9_A 64 KPYICQSCGKGFSRPDHLNGHIKQVHSGP 92 (95)
T ss_dssp SSBCCSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred CceECCCccchhCCHHHHHHHHHHhcCCC
Confidence 34558888888888888888888877643
No 135
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=94.60 E-value=0.06 Score=40.44 Aligned_cols=82 Identities=22% Similarity=0.173 Sum_probs=59.8
Q ss_pred hHHHHHHHHhhcCCCC----CCC--------chHHhhhhcEEEEEe---------------ecceEEEEeCCC---chHH
Q 037201 88 MEKYKMAVSAILTPKV----GYG--------FADELKRAWFCVRNV---------------RFGCLMVVSDDS---NFVE 137 (177)
Q Consensus 88 ~~KY~~Aar~vl~pkv----gyg--------La~eLrRAGv~Vr~V---------------~v~clvLVSDds---df~~ 137 (177)
.+..++++..+...+. |.| ++..|.+.|..|..+ .-|+++++|-.- +..+
T Consensus 26 ~~~l~~~~~~i~~a~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~i~iS~sG~t~~~~~ 105 (187)
T 3sho_A 26 PEAIEAAVEAICRADHVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLMIGVSVWRYLRDTVA 105 (187)
T ss_dssp HHHHHHHHHHHHHCSEEEEECCGGGHHHHHHHHHHHHHTTCCEEEECCCTHHHHHHHHTCCTTEEEEEECCSSCCHHHHH
T ss_pred HHHHHHHHHHHHhCCEEEEEecCchHHHHHHHHHHHHhcCCCEEEecCCchhHHHHHhcCCCCCEEEEEeCCCCCHHHHH
Confidence 4556666666655443 555 345677888888766 346777777643 4566
Q ss_pred HHHHHHHcCccEEEEecCCchhhhhhhccccc
Q 037201 138 VFQEATLRCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 138 ~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
+++.|+++|.++|.|-|..+..|.+.||..+.
T Consensus 106 ~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~ 137 (187)
T 3sho_A 106 ALAGAAERGVPTMALTDSSVSPPARIADHVLV 137 (187)
T ss_dssp HHHHHHHTTCCEEEEESCTTSHHHHHCSEEEE
T ss_pred HHHHHHHCCCCEEEEeCCCCCcchhhCcEEEE
Confidence 77888999999999999888899999998764
No 136
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.58 E-value=0.0054 Score=35.99 Aligned_cols=29 Identities=28% Similarity=0.394 Sum_probs=24.3
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+-|..||..|.+...|.+|. .+|..|
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~ 38 (46)
T 2en1_A 10 EKPFKCEECGKRFTQNSQLHSHQ-RVHTGE 38 (46)
T ss_dssp CCSEEETTTTEEESSHHHHHHHG-GGGSCC
T ss_pred CCCeeCCCCCcccCCHHHHHHHH-HHcCCC
Confidence 45678999999999999999997 457655
No 137
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=94.53 E-value=0.0072 Score=35.40 Aligned_cols=30 Identities=23% Similarity=0.303 Sum_probs=24.7
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||+.|.....|.+|.+ +|..|+
T Consensus 8 ~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~~ 37 (45)
T 2epq_A 8 EKPYSCPVCGLRFKRKDRMSYHVR-SHDGSV 37 (45)
T ss_dssp CCSSEETTTTEECSCHHHHHHHHH-HHSCCC
T ss_pred CCCCcCCCCCcccCCHHHHHHHHH-HccCCC
Confidence 456779999999999999999975 576554
No 138
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=94.52 E-value=0.013 Score=35.39 Aligned_cols=24 Identities=13% Similarity=-0.043 Sum_probs=12.7
Q ss_pred hhhhhcCCCcCChhHHHHHHHhhh
Q 037201 47 CLLIRNQGRFYNNDKLVNHFRQIH 70 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFkqlH 70 (177)
+.|..||+.|.+...|.+|.+.-|
T Consensus 33 ~~C~~C~~~f~~~~~l~~H~~~hh 56 (57)
T 3uk3_C 33 YKCEFCEYAAAQKTSLRYHLERHH 56 (57)
T ss_dssp EECSSSSCEESSHHHHHHHHHHHC
T ss_pred cCCCCCcchhCCHHHHHHHHHHhc
Confidence 335555555555555555554433
No 139
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=94.49 E-value=0.0052 Score=36.74 Aligned_cols=29 Identities=21% Similarity=0.125 Sum_probs=24.1
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+...|..|.+ +|..|
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (48)
T 2epr_A 10 RKQVACEICGKIFRDVYHLNRHKL-SHSGE 38 (48)
T ss_dssp CCSEEETTTTEEESSHHHHHHHGG-GSCSC
T ss_pred CcCeeCCCCCcccCCHHHHHHHHH-hcCCC
Confidence 456779999999999999999964 67654
No 140
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.48 E-value=0.01 Score=40.54 Aligned_cols=29 Identities=10% Similarity=0.148 Sum_probs=17.7
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
+.+.|..||+.|.+...|.+|.+.+|..|
T Consensus 68 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~ 96 (107)
T 1wjp_A 68 KKLTCLECMRTFKSSFSIWRHQVEVHNQN 96 (107)
T ss_dssp GGGEEGGGTEECSSHHHHHHHHHHTSCCC
T ss_pred CCccCccccchhCCHHHHHHHHHHHcCCC
Confidence 33456666666666666666666666543
No 141
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=94.47 E-value=0.0085 Score=32.18 Aligned_cols=26 Identities=35% Similarity=0.473 Sum_probs=21.2
Q ss_pred hhhh--hcCCCcCChhHHHHHHHhhhhhh
Q 037201 47 CLLI--RNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 47 ~Lc~--~CGrrf~t~~~L~kHFkqlHerE 73 (177)
+.|. .||..|.+...|..|.+ +|..|
T Consensus 3 ~~C~~~~C~k~f~~~~~L~~H~~-~H~~~ 30 (31)
T 1sp2_A 3 FMCTWSYCGKRFTRSDELQRHKR-THTGE 30 (31)
T ss_dssp CBCCSTTCCCBCSSHHHHHHHHT-TTSCC
T ss_pred cCCcCCCCCcccCCHhHHHHHHH-HhcCC
Confidence 5586 89999999999999974 56544
No 142
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=94.42 E-value=0.011 Score=36.91 Aligned_cols=26 Identities=19% Similarity=0.193 Sum_probs=19.7
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHhhh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQIH 70 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkqlH 70 (177)
+.+.|..||+.|.+...|.+|.+..|
T Consensus 39 ~~~~C~~C~k~f~~~~~L~~H~~~~H 64 (66)
T 2drp_A 39 KVYPCPFCFKEFTRKDNMTAHVKIIH 64 (66)
T ss_dssp CCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred cCeECCCCCCccCCHHHHHHHHHHHc
Confidence 44568888888888888888877766
No 143
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=94.38 E-value=0.01 Score=33.57 Aligned_cols=29 Identities=24% Similarity=0.326 Sum_probs=23.5
Q ss_pred hhhhhhh--hcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLI--RNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~--~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|. .||..|.+...|..|.+ +|..|
T Consensus 6 ~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~e 36 (37)
T 1va1_A 6 KKQHICHIQGCGKVYGKTSHLRAHLR-WHTGE 36 (37)
T ss_dssp CCCEECCSTTCCCEESCHHHHHHHHH-HHHTT
T ss_pred CCCCCCCCCCCCCccCCHHHHHHHHH-hcCCC
Confidence 4557798 49999999999999965 57655
No 144
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.28 E-value=0.0082 Score=36.49 Aligned_cols=29 Identities=14% Similarity=-0.035 Sum_probs=23.8
Q ss_pred hhhhhhhh--cCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIR--NQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~--CGrrf~t~~~L~kHFkqlHerE 73 (177)
|+++.|.. ||..|.+...|.+|. .+|..|
T Consensus 7 ekp~~C~~~~C~k~F~~~~~L~~H~-r~Htg~ 37 (38)
T 2eln_A 7 GILLKCPTDGCDYSTPDKYKLQAHL-KVHTAL 37 (38)
T ss_dssp CCCEECSSSSCCCEESCHHHHHHHH-HHHSCC
T ss_pred CCCCCCCCCCCCCccCCHHHHHHHH-HhcCCC
Confidence 56688986 999999999999996 467544
No 145
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=94.24 E-value=0.012 Score=35.59 Aligned_cols=25 Identities=20% Similarity=-0.019 Sum_probs=20.9
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHhh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQI 69 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkql 69 (177)
+.+.|..||+.|.+...|..|.+.-
T Consensus 3 ~~~~C~~C~~~f~~~~~l~~H~~~h 27 (57)
T 3uk3_C 3 SSRECSYCGKFFRSNYYLNIHLRTH 27 (57)
T ss_dssp --CBCTTTCCBCSCHHHHHHHHHHH
T ss_pred CCccCCCCcchhCChHHHHHHHHHc
Confidence 4577999999999999999998753
No 146
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=94.13 E-value=0.016 Score=39.43 Aligned_cols=32 Identities=16% Similarity=-0.014 Sum_probs=26.6
Q ss_pred hhhhhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 41 QRKKENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 41 ~r~er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
.+.|+.+.|..||+.|.....|.+|.+ +|..+
T Consensus 8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r-~Htg~ 39 (66)
T 2epp_A 8 LREAGILPCGLCGKVFTDANRLRQHEA-QHGVT 39 (66)
T ss_dssp CCCCCCCCCTTTCCCCSCHHHHHHHHH-HHTTT
T ss_pred CCCccCcCCCCCCCccCCHHHHHhhhh-hhCCC
Confidence 345677889999999999999999976 47765
No 147
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=94.07 E-value=0.013 Score=42.14 Aligned_cols=32 Identities=13% Similarity=0.260 Sum_probs=27.3
Q ss_pred hhhhhhhh--cCCCcCChhHHHHHHHhhhhhhhh
Q 037201 44 KENCLLIR--NQGRFYNNDKLVNHFRQIHEGEQK 75 (177)
Q Consensus 44 er~~Lc~~--CGrrf~t~~~L~kHFkqlHerEr~ 75 (177)
|+++-|.. ||+.|.....|.+|.+.+|..|+-
T Consensus 25 EKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP 58 (73)
T 1x3c_A 25 YRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLP 58 (73)
T ss_dssp SCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCC
T ss_pred CCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCC
Confidence 45577975 999999999999999999987753
No 148
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=94.06 E-value=0.0016 Score=36.00 Aligned_cols=27 Identities=19% Similarity=0.080 Sum_probs=22.5
Q ss_pred hhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 47 CLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
+.|..||+.|.+...|.+|- .+|..|+
T Consensus 3 ~~C~~C~k~f~~~~~L~~H~-~~H~~~k 29 (32)
T 2kfq_A 3 FACPACPKRFMRSDALSKHI-KTAFIVV 29 (32)
T ss_dssp SSSSSSCTTHHHHHTTSSST-TSSSSSS
T ss_pred CCCCCCCcccCCHHHHHHHH-HHHccCC
Confidence 56999999999999999996 4676653
No 149
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=94.05 E-value=0.028 Score=29.02 Aligned_cols=25 Identities=12% Similarity=0.066 Sum_probs=20.8
Q ss_pred hhhhhcCCCcCChhHHHHHHHhhhhh
Q 037201 47 CLLIRNQGRFYNNDKLVNHFRQIHEG 72 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFkqlHer 72 (177)
+-|..||+.|.+...|..|-+ +|..
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~-~h~~ 27 (30)
T 1klr_A 3 YQCQYCEFRSADSSNLKTHIK-TKHS 27 (30)
T ss_dssp CCCSSSSCCCSCSHHHHHHHH-HHTS
T ss_pred ccCCCCCCccCCHHHHHHHHH-HHcc
Confidence 459999999999999999966 4543
No 150
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.03 E-value=0.011 Score=40.59 Aligned_cols=27 Identities=19% Similarity=0.338 Sum_probs=17.5
Q ss_pred hhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 47 CLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
+.|..||+.|.+...|.+|.+..|..|
T Consensus 95 ~~C~~C~~~f~~~~~l~~H~~~~H~~~ 121 (124)
T 2dlq_A 95 YKCSSCSQQFMQKKDLQSHMIKLHSGP 121 (124)
T ss_dssp EECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred ccCCCccchhCCHHHHHHHHHHHCCCC
Confidence 346667777777777777766666543
No 151
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=93.90 E-value=0.016 Score=37.79 Aligned_cols=26 Identities=19% Similarity=0.155 Sum_probs=15.9
Q ss_pred hhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 47 CLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
+.|..||..|.+...|.+|.+ +|..|
T Consensus 63 ~~C~~C~~~f~~~~~l~~H~~-~H~~~ 88 (90)
T 1a1h_A 63 FACDICGRKFARSDERKRHTK-IHLRQ 88 (90)
T ss_dssp EECTTTCCEESSHHHHHHHHG-GGGC-
T ss_pred ccCCCCCchhCCHHHHHHHHH-Hhccc
Confidence 446677777777777777754 45544
No 152
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=93.85 E-value=0.017 Score=35.98 Aligned_cols=28 Identities=14% Similarity=0.334 Sum_probs=25.5
Q ss_pred hhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 46 NCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 46 ~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
-|+|+.|-..|.+-+.|..||...|..+
T Consensus 5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~ 32 (34)
T 3mjh_B 5 GFICPQCMKSLGSADELFKHYEAVHDAG 32 (34)
T ss_dssp EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence 3789999999999999999999999754
No 153
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=93.73 E-value=0.019 Score=32.13 Aligned_cols=30 Identities=30% Similarity=0.273 Sum_probs=23.9
Q ss_pred hhhhhhh--hcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLI--RNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~--~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|. .||+.|.+...|.+|-+ +|..|+
T Consensus 4 ~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~k 35 (38)
T 1bhi_A 4 DKPFLCTAPGCGQRFTNEDHLAVHKH-KHEMTL 35 (38)
T ss_dssp CCCEECCCTTTCCEESSHHHHHHHHH-HHHTTT
T ss_pred CcceECCCCCCCcccCCHHHHHHHHH-HhCCCC
Confidence 3456799 59999999999999974 676653
No 154
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=93.68 E-value=0.012 Score=38.04 Aligned_cols=29 Identities=14% Similarity=0.056 Sum_probs=25.5
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
+.+-|..||+.|.+...|.+|.+..|..+
T Consensus 44 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~ 72 (77)
T 2ct1_A 44 AKFHCPHCDTVIARKSDLGVHLRKQHSYS 72 (77)
T ss_dssp SSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred CccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence 45679999999999999999999988654
No 155
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=93.60 E-value=0.022 Score=35.46 Aligned_cols=28 Identities=7% Similarity=0.108 Sum_probs=24.6
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHE 71 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHe 71 (177)
++.+-|..||+.|.+...|..|.+..|.
T Consensus 8 ~k~~~C~~C~k~f~~~~~l~~H~~~~H~ 35 (66)
T 2drp_A 8 EHTYRCKVCSRVYTHISNFCRHYVTSHK 35 (66)
T ss_dssp TTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred CcceECCCCcchhCCHHHHHHHHHHHcC
Confidence 4557799999999999999999988783
No 156
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=93.43 E-value=0.15 Score=38.11 Aligned_cols=80 Identities=19% Similarity=0.196 Sum_probs=56.8
Q ss_pred hHHHHHHHHhhcCCCC----CCC--------chHHhhhhcEEEEEe---------ecceEEEEeCCC---chHHHHHHHH
Q 037201 88 MEKYKMAVSAILTPKV----GYG--------FADELKRAWFCVRNV---------RFGCLMVVSDDS---NFVEVFQEAT 143 (177)
Q Consensus 88 ~~KY~~Aar~vl~pkv----gyg--------La~eLrRAGv~Vr~V---------~v~clvLVSDds---df~~~lr~Ar 143 (177)
.+..++++..+...+. |.| ++..|.+.|..+..+ .-|++|++|-.- +..++++.|+
T Consensus 27 ~~~i~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vi~iS~sG~t~~~~~~~~~ak 106 (180)
T 1jeo_A 27 KNKLDSLIDRIIKAKKIFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGETTTPSYEKDDLLILISGSGRTESVLTVAKKAK 106 (180)
T ss_dssp HHHHHHHHHHHHHCSSEEEECCHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEEESSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCEEEEEeecHHHHHHHHHHHHHHHcCCeEEEeCCCccccCCCCCEEEEEeCCCCcHHHHHHHHHHH
Confidence 3456666665554443 544 234567788877765 347788888654 4566678888
Q ss_pred HcCccEEEEecCCchhhhhhhcccc
Q 037201 144 LRCLKMVVVGDMSDGALKRIANAFF 168 (177)
Q Consensus 144 ~r~l~TVVVGd~~~~~L~r~Ad~~~ 168 (177)
++|.++|.|-+..+. |.+.||..+
T Consensus 107 ~~g~~vi~IT~~~~s-l~~~ad~~l 130 (180)
T 1jeo_A 107 NINNNIIAIVCECGN-VVEFADLTI 130 (180)
T ss_dssp TTCSCEEEEESSCCG-GGGGCSEEE
T ss_pred HCCCcEEEEeCCCCh-HHHhCCEEE
Confidence 999999999998778 999999765
No 157
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=93.37 E-value=0.13 Score=38.66 Aligned_cols=81 Identities=16% Similarity=0.150 Sum_probs=56.9
Q ss_pred hHHHHHHHHhhcCCCC----CCC--------chHHhhhhcEEEEEe---------ecceEEEEeCCC---chHHHHHHHH
Q 037201 88 MEKYKMAVSAILTPKV----GYG--------FADELKRAWFCVRNV---------RFGCLMVVSDDS---NFVEVFQEAT 143 (177)
Q Consensus 88 ~~KY~~Aar~vl~pkv----gyg--------La~eLrRAGv~Vr~V---------~v~clvLVSDds---df~~~lr~Ar 143 (177)
.+..++++..+...+. |.| ++..|.+.|+.+..+ .-|++|++|-.- +..++++.|+
T Consensus 24 ~~~i~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vI~iS~sG~t~~~~~~~~~ak 103 (186)
T 1m3s_A 24 NEEADQLADHILSSHQIFTAGAGRSGLMAKSFAMRLMHMGFNAHIVGEILTPPLAEGDLVIIGSGSGETKSLIHTAAKAK 103 (186)
T ss_dssp HHHHHHHHHHHHHCSCEEEECSHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEECSSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEEecCHHHHHHHHHHHHHHhcCCeEEEeCcccccCCCCCCEEEEEcCCCCcHHHHHHHHHHH
Confidence 3455666665554432 444 234567788877665 346778887654 3556778888
Q ss_pred HcCccEEEEecCCchhhhhhhcccc
Q 037201 144 LRCLKMVVVGDMSDGALKRIANAFF 168 (177)
Q Consensus 144 ~r~l~TVVVGd~~~~~L~r~Ad~~~ 168 (177)
++|.++|.|-+..+..|.+.||..+
T Consensus 104 ~~g~~vi~IT~~~~s~l~~~ad~~l 128 (186)
T 1m3s_A 104 SLHGIVAALTINPESSIGKQADLII 128 (186)
T ss_dssp HTTCEEEEEESCTTSHHHHHCSEEE
T ss_pred HCCCEEEEEECCCCCchHHhCCEEE
Confidence 9999999999987789999999765
No 158
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=93.35 E-value=0.017 Score=37.08 Aligned_cols=18 Identities=17% Similarity=0.087 Sum_probs=9.3
Q ss_pred hhhcCCCcCChhHHHHHH
Q 037201 49 LIRNQGRFYNNDKLVNHF 66 (177)
Q Consensus 49 c~~CGrrf~t~~~L~kHF 66 (177)
|..||+.|.+...|.+|.
T Consensus 48 C~~C~k~f~~~~~L~~H~ 65 (74)
T 2lce_A 48 CNICGAQFNRPANLKTHT 65 (74)
T ss_dssp CTTTCCEESCHHHHHHHH
T ss_pred CCCCCchhCCHHHHHHHH
Confidence 555555555555555553
No 159
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=93.34 E-value=0.13 Score=38.50 Aligned_cols=80 Identities=13% Similarity=0.215 Sum_probs=57.9
Q ss_pred HHHHHHHhhcCCC--C---CCC--------chHHhhhhcEEEEEe--------------ecceEEEEeCCC---chHHHH
Q 037201 90 KYKMAVSAILTPK--V---GYG--------FADELKRAWFCVRNV--------------RFGCLMVVSDDS---NFVEVF 139 (177)
Q Consensus 90 KY~~Aar~vl~pk--v---gyg--------La~eLrRAGv~Vr~V--------------~v~clvLVSDds---df~~~l 139 (177)
..++++..+...+ + |.| ++..|.+.|..+..+ .-|++|++|-.- +..+++
T Consensus 37 ~i~~~~~~i~~a~~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~d~vI~iS~sG~t~~~~~~~ 116 (183)
T 2xhz_A 37 NFTLACEKMFWCKGKVVVMGMGASGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALI 116 (183)
T ss_dssp HHHHHHHHHHTCSSCEEEEECHHHHHHHHHHHHHHHTTTCCEEECCTTHHHHHTSTTCCTTCEEEEECSSSCCHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEEEeecHHHHHHHHHHHHHHhcCceEEEeCchHHhhhhhccCCCCCEEEEEeCCCCCHHHHHHH
Confidence 5666666666543 2 444 344566778877666 347788888654 455667
Q ss_pred HHHHHcCccEEEEecCCchhhhhhhccccc
Q 037201 140 QEATLRCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 140 r~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
+.|+++|.++|.|-+..+..|.+.||..+.
T Consensus 117 ~~ak~~g~~vi~IT~~~~s~la~~ad~~l~ 146 (183)
T 2xhz_A 117 PVLKRLHVPLICITGRPESSMARAADVHLC 146 (183)
T ss_dssp HHHHTTTCCEEEEESCTTSHHHHHSSEEEE
T ss_pred HHHHHCCCCEEEEECCCCChhHHhCCEEEE
Confidence 788899999999999888899999998764
No 160
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=93.32 E-value=0.015 Score=36.88 Aligned_cols=23 Identities=9% Similarity=-0.064 Sum_probs=14.0
Q ss_pred hhhhhhcCCCcCChhHHHHHHHh
Q 037201 46 NCLLIRNQGRFYNNDKLVNHFRQ 68 (177)
Q Consensus 46 ~~Lc~~CGrrf~t~~~L~kHFkq 68 (177)
.+-|..||..|.+...|.+|.+.
T Consensus 37 ~~~C~~C~~~f~~~~~L~~H~~~ 59 (70)
T 1x5w_A 37 PFKCNYCSFDTKQPSNLSKHMKK 59 (70)
T ss_dssp SEECSSSSCEESSHHHHHHHHHH
T ss_pred CEeCCCCCCccCCHHHHHHHHHH
Confidence 34466666666666666666543
No 161
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=93.25 E-value=0.019 Score=34.81 Aligned_cols=24 Identities=17% Similarity=0.117 Sum_probs=21.5
Q ss_pred hhhhhhhhhcCCCcCChhHHHHHH
Q 037201 43 KKENCLLIRNQGRFYNNDKLVNHF 66 (177)
Q Consensus 43 ~er~~Lc~~CGrrf~t~~~L~kHF 66 (177)
.|+.+.|..||+.|.....|.+|-
T Consensus 5 gekp~~C~~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 5 KPARFMCLPCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp SCCCCEETTTTEECSCHHHHHHHH
T ss_pred CccCeECCCCCCccCCHhHccCcC
Confidence 456788999999999999999995
No 162
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.16 E-value=0.039 Score=37.71 Aligned_cols=27 Identities=15% Similarity=0.106 Sum_probs=18.2
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIH 70 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlH 70 (177)
++.+-|.+||+.|.+...|.+|.+.-|
T Consensus 52 ~~~~~C~~C~k~F~~~~~L~~H~~~h~ 78 (98)
T 2gqj_A 52 QDALKCQHCRKQFKSKAGLNYHTMAEH 78 (98)
T ss_dssp HHHHSCSSSCCCCSCHHHHHHHHHHHS
T ss_pred CCCEECCCCCCccCCHHHHHHHHHHHc
Confidence 345567777777777777777765444
No 163
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=93.15 E-value=0.026 Score=39.42 Aligned_cols=28 Identities=14% Similarity=-0.046 Sum_probs=19.3
Q ss_pred hhhhhhhhcCCCc-CChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRF-YNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf-~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||..| .+...|..|-+ +| .|
T Consensus 32 ~~~~~C~~C~k~F~~~~~~L~~H~~-~h-~~ 60 (96)
T 2ctd_A 32 KGSVSCPTCQAVGRKTIEGLKKHME-NC-KQ 60 (96)
T ss_dssp TSCEECTTTCSCEESSHHHHHHHHH-HH-CC
T ss_pred CCCcCCCCCCCCcccCHHHHHHHHH-HH-CC
Confidence 4445688888888 78888888854 46 54
No 164
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=93.12 E-value=0.13 Score=39.80 Aligned_cols=82 Identities=23% Similarity=0.279 Sum_probs=58.0
Q ss_pred hHHHHHHHHhhcCCCC----CCC--------chHHhhhhcEEEEEe---------ecceEEEEeCC---CchHHHHHHHH
Q 037201 88 MEKYKMAVSAILTPKV----GYG--------FADELKRAWFCVRNV---------RFGCLMVVSDD---SNFVEVFQEAT 143 (177)
Q Consensus 88 ~~KY~~Aar~vl~pkv----gyg--------La~eLrRAGv~Vr~V---------~v~clvLVSDd---sdf~~~lr~Ar 143 (177)
.+..++++..+...+. |.| ++..|.+.|..+..+ .-|++|++|-. .+..++++.|+
T Consensus 34 ~~~l~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~DvvI~iS~SG~t~~~i~~~~~ak 113 (200)
T 1vim_A 34 LETVGEMIKLIDSARSIFVIGAGRSGYIAKAFAMRLMHLGYTVYVVGETVTPRITDQDVLVGISGSGETTSVVNISKKAK 113 (200)
T ss_dssp HHHHHHHHHHHHHSSCEEEECSHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEECSSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCEEEEEEecHHHHHHHHHHHHHHhcCCeEEEeCCccccCCCCCCEEEEEeCCCCcHHHHHHHHHHH
Confidence 3445555555544332 444 234567778777765 34778888864 45667788888
Q ss_pred HcCccEEEEecCCchhhhhhhccccc
Q 037201 144 LRCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 144 ~r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
++|.++|.|-+..+..|.+.||..+.
T Consensus 114 ~~g~~vI~IT~~~~s~La~~ad~~l~ 139 (200)
T 1vim_A 114 DIGSKLVAVTGKRDSSLAKMADVVMV 139 (200)
T ss_dssp HHTCEEEEEESCTTSHHHHHCSEEEE
T ss_pred HCCCeEEEEECCCCChHHHhCCEEEE
Confidence 99999999999888899999998764
No 165
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=93.02 E-value=0.03 Score=34.24 Aligned_cols=27 Identities=22% Similarity=0.370 Sum_probs=22.5
Q ss_pred hhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 46 NCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 46 ~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
.+.|..||+.|.+...|..|.+. |..+
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~ 28 (60)
T 2adr_A 2 SFVCEVCTRAFARQEHLKRHYRS-HTNE 28 (60)
T ss_dssp CBCCTTTCCCBSCHHHHHHHHHT-TTSS
T ss_pred cCcCCCCccccCCHHHHHHHHHH-hCCC
Confidence 35699999999999999999764 7554
No 166
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=92.94 E-value=0.033 Score=43.06 Aligned_cols=36 Identities=17% Similarity=0.170 Sum_probs=28.3
Q ss_pred hhhhhhhhhcCCCcCChhHHHHHHHhhhhhhhhhhh
Q 037201 43 KKENCLLIRNQGRFYNNDKLVNHFRQIHEGEQKKRS 78 (177)
Q Consensus 43 ~er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr~Krl 78 (177)
-++.+.|..||+.|.+...|..|++.-.-+.+.|.|
T Consensus 47 GekpfyC~~C~K~F~~~~~L~~H~rsK~HKrrvk~l 82 (124)
T 1zr9_A 47 GGGLHRCLACARYFIDSTNLKTHFRSKDHKKRLKQL 82 (124)
T ss_dssp GGGCSEETTTTEECSSHHHHHHHTTCHHHHHHHHHH
T ss_pred CCcceEcccCcchhCCHHHHHHHHhhhhhhHHHHHh
Confidence 457788999999999999999999876544444443
No 167
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=92.87 E-value=0.09 Score=39.39 Aligned_cols=46 Identities=13% Similarity=0.230 Sum_probs=38.4
Q ss_pred cceEEEEeC---CCchHHHHHHHHHcCccEEEEecCCchhhhhhhcccc
Q 037201 123 FGCLMVVSD---DSNFVEVFQEATLRCLKMVVVGDMSDGALKRIANAFF 168 (177)
Q Consensus 123 v~clvLVSD---dsdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~ 168 (177)
-|+++++|- ..+..++++.|+++|.++|.|-+..+..|.+.||..+
T Consensus 111 ~Dvvi~iS~sG~t~~~~~~~~~ak~~g~~vi~iT~~~~s~L~~~ad~~l 159 (188)
T 1tk9_A 111 KDVLIGISTSGKSPNVLEALKKAKELNMLCLGLSGKGGGMMNKLCDHNL 159 (188)
T ss_dssp TCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEEEGGGTTHHHHCSEEE
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCcchHHcCCEEE
Confidence 367888886 3556778888999999999999987789999999876
No 168
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=92.70 E-value=0.15 Score=38.39 Aligned_cols=45 Identities=18% Similarity=0.341 Sum_probs=37.8
Q ss_pred ceEEEEeCCC---chHHHHHHHHHcCccEEEEecCCchhhhhhhcccc
Q 037201 124 GCLMVVSDDS---NFVEVFQEATLRCLKMVVVGDMSDGALKRIANAFF 168 (177)
Q Consensus 124 ~clvLVSDds---df~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~ 168 (177)
|+++++|-.- +..++++.|+++|.++|.|-+..+..|.+.||..+
T Consensus 118 d~vI~iS~SG~t~~~~~~~~~ak~~g~~vI~IT~~~~s~L~~~ad~~l 165 (198)
T 2xbl_A 118 DVLIGYSTSGKSPNILAAFREAKAKGMTCVGFTGNRGGEMRELCDLLL 165 (198)
T ss_dssp CEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECSCCCTHHHHCSEEE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHCCCeEEEEECCCCCcHHHhCCEEE
Confidence 6688888643 56777888899999999999988889999999876
No 169
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=92.63 E-value=0.025 Score=36.22 Aligned_cols=30 Identities=27% Similarity=0.347 Sum_probs=24.6
Q ss_pred hhhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 43 KKENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 43 ~er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
.++.+.|..||+.|.+...|..|.+ +|..+
T Consensus 14 ~~~~~~C~~C~k~f~~~~~l~~H~~-~H~~~ 43 (74)
T 2lce_A 14 SDKPYKCDRCQASFRYKGNLASHKT-VHTGE 43 (74)
T ss_dssp CCCSBCCTTSSCCBSCHHHHHHHHH-HHCCC
T ss_pred CCCCeECCCCCceeCCHHHHHHHHH-HcCCC
Confidence 3566789999999999999999975 56544
No 170
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.61 E-value=0.042 Score=37.70 Aligned_cols=30 Identities=10% Similarity=0.012 Sum_probs=25.5
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+...|.+|.+..|.-+
T Consensus 78 ~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~ 107 (115)
T 2dmi_A 78 QKVLKCMYCGHSFESLQDLSVHMIKTKHYQ 107 (115)
T ss_dssp CSSCBCSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred CcceECCCCCCccCCHHHHHHHHHHhCCcc
Confidence 466789999999999999999998777543
No 171
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=92.48 E-value=0.026 Score=33.76 Aligned_cols=29 Identities=10% Similarity=0.163 Sum_probs=23.7
Q ss_pred hhhhhhh--hcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLI--RNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~--~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|. .||+.|.....|..|.+ +|..|
T Consensus 16 ~k~~~C~~~~C~k~F~~~~~L~~H~~-~H~~e 46 (47)
T 1ncs_A 16 DKTFECLFPGCTKTFKRRYNIRSHIQ-THLED 46 (47)
T ss_dssp TTEEECCCTTCCCEECSSSSHHHHHH-HHTTT
T ss_pred CCCeECCCCCCCCccCCHHHHHHHHH-HccCC
Confidence 4567795 79999999999999965 57655
No 172
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=92.40 E-value=0.039 Score=37.17 Aligned_cols=26 Identities=15% Similarity=0.097 Sum_probs=16.0
Q ss_pred hhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 47 CLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
+.|..||+.|.+...|.+|. ++|..|
T Consensus 74 ~~C~~C~~~f~~~~~L~~H~-~~H~~~ 99 (106)
T 2ee8_A 74 FKCQECGKGFCQSRTLAVHK-TLHMQT 99 (106)
T ss_dssp TSCSSSCCCCSSHHHHHHHH-HHTTSC
T ss_pred eECCCcCCcccCHHHHHHHH-HHhCCC
Confidence 44666777777777777764 355443
No 173
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=92.26 E-value=0.023 Score=36.69 Aligned_cols=19 Identities=16% Similarity=0.183 Sum_probs=10.1
Q ss_pred hhhhcCCCcCChhHHHHHH
Q 037201 48 LLIRNQGRFYNNDKLVNHF 66 (177)
Q Consensus 48 Lc~~CGrrf~t~~~L~kHF 66 (177)
-|..||..|.+...|.+|.
T Consensus 48 ~C~~C~~~f~~~~~L~~H~ 66 (77)
T 2cot_A 48 KCDECGKAFIQRSHLIGHH 66 (77)
T ss_dssp ECSSSCCEESSHHHHHHHG
T ss_pred eCCCCCCccCCHHHHHHHH
Confidence 3555555555555555554
No 174
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=92.16 E-value=0.044 Score=34.68 Aligned_cols=25 Identities=12% Similarity=-0.170 Sum_probs=22.0
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQ 68 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkq 68 (177)
++.+.|..||+.|.+...|.+|.+.
T Consensus 7 ~~~~~C~~C~k~f~~~~~L~~H~~~ 31 (70)
T 1x5w_A 7 GHPEKCSECSYSCSSKAALRIHERI 31 (70)
T ss_dssp CCSEECSSSSCEESSHHHHHHHHGG
T ss_pred CCCeECCCCCcccCCHHHHHHHHHH
Confidence 4567799999999999999999865
No 175
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=92.09 E-value=0.039 Score=35.27 Aligned_cols=21 Identities=29% Similarity=0.360 Sum_probs=13.1
Q ss_pred hhhhhcCCCcCChhHHHHHHH
Q 037201 47 CLLIRNQGRFYNNDKLVNHFR 67 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFk 67 (177)
+-|..||+.|.+...|.+|.+
T Consensus 43 ~~C~~C~~~f~~~~~L~~H~~ 63 (72)
T 1x6e_A 43 YKCLECGKAFSQNSGLINHQR 63 (72)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 446666666666666666654
No 176
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=91.88 E-value=0.17 Score=39.51 Aligned_cols=46 Identities=15% Similarity=0.278 Sum_probs=38.1
Q ss_pred ceEEEEeCC---CchHHHHHHHHHcCccEEEEecCCchhhhhhhccccc
Q 037201 124 GCLMVVSDD---SNFVEVFQEATLRCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 124 ~clvLVSDd---sdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
|++|++|-. .+..++++.|+++|.++|.|-+..+..|.+.||.-+.
T Consensus 133 DvvI~iS~SG~t~~~i~~~~~ak~~G~~vIaIT~~~~s~La~~aD~~l~ 181 (212)
T 2i2w_A 133 DVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIR 181 (212)
T ss_dssp CEEEEECSSSCCHHHHHHHHHHHHHTCEEEEEEETTCGGGTTCSSEEEE
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHCCCeEEEEECCCCCchHHhCCEEEE
Confidence 678888754 4566778888999999999999888899999998664
No 177
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.87 E-value=0.087 Score=35.96 Aligned_cols=28 Identities=7% Similarity=-0.083 Sum_probs=23.4
Q ss_pred hhhhhhhhcCCCcC-ChhHHHHHHHhhhhh
Q 037201 44 KENCLLIRNQGRFY-NNDKLVNHFRQIHEG 72 (177)
Q Consensus 44 er~~Lc~~CGrrf~-t~~~L~kHFkqlHer 72 (177)
++.+.|..||+.|. +...|..|.+. |..
T Consensus 22 ~~~~~C~~C~k~f~~~~~~L~~H~~~-h~~ 50 (98)
T 2gqj_A 22 RGEAVCPTCNVVTRKTLVGLKKHMEV-CQK 50 (98)
T ss_dssp TSCCCCTTTCCCCSSCSHHHHHHHHH-HHH
T ss_pred CCCcCCCCCCCChhhhHHHHHHHHHH-HcC
Confidence 45677999999999 99999999865 544
No 178
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=91.79 E-value=0.046 Score=35.21 Aligned_cols=29 Identities=17% Similarity=0.265 Sum_probs=22.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEG 72 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHer 72 (177)
++.+.|..||+.|.+...|..|.+..|..
T Consensus 13 ~k~~~C~~C~~~f~~~~~l~~H~~~~~~~ 41 (86)
T 1x6h_A 13 EKPYACSHCDKTFRQKQLLDMHFKRYHDP 41 (86)
T ss_dssp CCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred CCCCcCCCCCCccCCHHHHHHHHHHhcCC
Confidence 34566888999999888888888877754
No 179
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=91.70 E-value=0.04 Score=35.18 Aligned_cols=29 Identities=28% Similarity=0.394 Sum_probs=23.9
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||+.|.+...|..|.+ +|..|
T Consensus 12 ~k~~~C~~C~k~f~~~~~L~~H~~-~h~~~ 40 (72)
T 1x6e_A 12 EKPYGCVECGKAFSRSSILVQHQR-VHTGE 40 (72)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHH-GGGCS
T ss_pred CCCccCCCCCCccCCHHHHHHHHH-hcCCC
Confidence 456779999999999999999976 46543
No 180
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=91.69 E-value=0.029 Score=40.53 Aligned_cols=26 Identities=8% Similarity=-0.147 Sum_probs=13.8
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHhhh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQIH 70 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkqlH 70 (177)
+.+.|..||+.|.+...|..|.+.+|
T Consensus 17 kpy~C~~Cgk~F~~~~~L~~H~r~~H 42 (102)
T 2ghf_A 17 GGYECKYCTFQTPDLNMFTFHVDSEH 42 (102)
T ss_dssp SSEECSSCSCEESCHHHHHHHHHHHC
T ss_pred cCcCCCCCCCccCCHHHHHHHHHhhC
Confidence 44445555555555555555555455
No 181
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=91.56 E-value=0.044 Score=36.17 Aligned_cols=27 Identities=15% Similarity=0.000 Sum_probs=21.9
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHhhhh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQIHE 71 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkqlHe 71 (177)
+.+-|..||..|.+...|..|-+.-|.
T Consensus 30 ~~~~C~~C~k~f~~~~~L~~H~~~h~~ 56 (88)
T 1llm_C 30 KPFACDICGRKFARSDERKRHRDIQHI 56 (88)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHHHTH
T ss_pred CCccCCCCCCccCCHHHHHHHHHHhCC
Confidence 445688899999999999999877774
No 182
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=91.43 E-value=0.39 Score=36.65 Aligned_cols=82 Identities=15% Similarity=0.214 Sum_probs=62.0
Q ss_pred hHHHHHHHHhhcCCC--C---CCCc--------hHHhhhhcEEEEEe--------------ecceEEEEeCCC---chHH
Q 037201 88 MEKYKMAVSAILTPK--V---GYGF--------ADELKRAWFCVRNV--------------RFGCLMVVSDDS---NFVE 137 (177)
Q Consensus 88 ~~KY~~Aar~vl~pk--v---gygL--------a~eLrRAGv~Vr~V--------------~v~clvLVSDds---df~~ 137 (177)
.+..++++..+...+ + |.|- +..|.+.|..+..+ .-|+++++|-.- +..+
T Consensus 31 ~~~i~~~~~~i~~a~~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dvvI~iS~sG~t~~~~~ 110 (201)
T 3fxa_A 31 EEALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLN 110 (201)
T ss_dssp HHHHHHHHHHHHHCSSCEEEECCTHHHHHHHHHHHHHHHTTCCEEECCHHHHTTTGGGGCCTTCEEEEECSSSCCHHHHT
T ss_pred HHHHHHHHHHHHhcCCcEEEEEecHHHHHHHHHHHHHHhcCCcEEEeCchHHHhhhhhcCCCCCEEEEEeCCCCCHHHHH
Confidence 466777777777664 2 6663 33577889888877 347788888654 4456
Q ss_pred HHHHHHHcCccEEEEecCCchhhhhhhccccc
Q 037201 138 VFQEATLRCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 138 ~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
+++.|+++|.++|.|-+..+..|.+.||..+.
T Consensus 111 ~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~ 142 (201)
T 3fxa_A 111 LIPACKTKGSTLIGVTENPDSVIAKEADIFFP 142 (201)
T ss_dssp THHHHHHHTCEEEEEESCTTSHHHHHCSEEEE
T ss_pred HHHHHHHcCCeEEEEECCCCChhHHhCCEEEE
Confidence 67888999999999999888899999998774
No 183
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.17 E-value=0.083 Score=34.85 Aligned_cols=26 Identities=42% Similarity=0.530 Sum_probs=19.6
Q ss_pred hhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 47 CLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
+.|..||..|.+...|..|.+ +|..|
T Consensus 63 ~~C~~C~k~f~~~~~L~~H~~-~H~~~ 88 (95)
T 2ej4_A 63 EECPREGKSFKAKYKLVNHIR-VHTGE 88 (95)
T ss_dssp TTCSSTTCCCSSHHHHHHHHH-HHHTC
T ss_pred cCCCCCCcccCCHHHHHHHHH-hcCCC
Confidence 568888888888888888865 56554
No 184
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=91.12 E-value=0.079 Score=31.81 Aligned_cols=25 Identities=20% Similarity=0.187 Sum_probs=18.5
Q ss_pred hhhhhcCCCcCChhHHHHHHHhhhhh
Q 037201 47 CLLIRNQGRFYNNDKLVNHFRQIHEG 72 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFkqlHer 72 (177)
+.|..||..|.+...|..|.+. |..
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~-h~~ 26 (57)
T 1bbo_A 2 YICEECGIRXKKPSMLKKHIRT-HTD 26 (57)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHH-TSS
T ss_pred CcCCCCcCcCCCHHHHHHHHHh-cCC
Confidence 3478888888888888888754 544
No 185
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=90.98 E-value=0.053 Score=34.33 Aligned_cols=23 Identities=22% Similarity=0.232 Sum_probs=18.3
Q ss_pred hhhhhhhcCCCcCChhHHHHHHH
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFR 67 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFk 67 (177)
+.+-|..||+.|.+...|..|.+
T Consensus 48 ~~~~C~~C~~~f~~~~~l~~H~~ 70 (73)
T 1f2i_G 48 KPFQCRICMRNFSRSDHLTTHIR 70 (73)
T ss_dssp CCEECTTTCCEESCHHHHHHHHT
T ss_pred CCeECCCCCchhCCHHHHHHHHH
Confidence 34558889999999999988854
No 186
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=90.87 E-value=0.29 Score=37.22 Aligned_cols=46 Identities=17% Similarity=0.313 Sum_probs=38.1
Q ss_pred ceEEEEeCC---CchHHHHHHHHHcCccEEEEecCCchhhhhh---hccccc
Q 037201 124 GCLMVVSDD---SNFVEVFQEATLRCLKMVVVGDMSDGALKRI---ANAFFS 169 (177)
Q Consensus 124 ~clvLVSDd---sdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r~---Ad~~~s 169 (177)
|+++.+|-. .+..++++.|+++|.+||.|-+..+..|.+. ||..+.
T Consensus 115 DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~La~~~~~ad~~l~ 166 (199)
T 1x92_A 115 DVLLAISTSGNSANVIQAIQAAHDREMLVVALTGRDGGGMASLLLPEDVEIR 166 (199)
T ss_dssp CEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHCCTTCEEEE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCcHHhccccCCEEEE
Confidence 667888754 4566788888999999999999888999999 998663
No 187
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=90.87 E-value=0.05 Score=40.23 Aligned_cols=28 Identities=25% Similarity=0.272 Sum_probs=17.7
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
+.+.|..||..|.+...|..|.+ +|..|
T Consensus 21 k~y~C~~C~k~F~~~~~L~~H~~-~H~~~ 48 (133)
T 2lt7_A 21 VYYICIVCKRSYVCLTSLRRHFN-IHSWE 48 (133)
T ss_dssp EEEEETTTCCEESCHHHHHHHHH-HHHCC
T ss_pred cCeECCCCCCCcCCHHHHHHHHH-HcCCC
Confidence 34557777777777777777754 56544
No 188
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.68 E-value=0.038 Score=32.27 Aligned_cols=29 Identities=28% Similarity=0.305 Sum_probs=23.4
Q ss_pred hhhhhhh--hcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLI--RNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~--~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|. .||..|.+...|..|.+ +|..|
T Consensus 10 ~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~ 40 (48)
T 2ent_A 10 EKPFACTWPGCGWRFSRSDELSRHRR-SHSGV 40 (48)
T ss_dssp CCCEECCSSSCCCEESSHHHHHHHHT-TSCCC
T ss_pred CCCeECCCCCCCCccCCHHHHHHHHH-HhCCC
Confidence 3557797 89999999999999964 57654
No 189
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=90.67 E-value=0.046 Score=35.23 Aligned_cols=30 Identities=23% Similarity=0.313 Sum_probs=24.5
Q ss_pred hhhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 43 KKENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 43 ~er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
.++.+.|..||..|.+...|..|.+ +|..+
T Consensus 15 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~ 44 (77)
T 2cot_A 15 ERRRYKCDECGKSFSHSSDLSKHRR-THTGE 44 (77)
T ss_dssp CSCSSBCSSSCCBCSCHHHHHHHHT-TTCCS
T ss_pred CCCCEECCCCCcccCCHHHHHHHHH-HcCCC
Confidence 3567889999999999999999975 46543
No 190
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=90.46 E-value=0.065 Score=34.19 Aligned_cols=28 Identities=14% Similarity=0.220 Sum_probs=20.4
Q ss_pred hhhhhhh--cCCCcCChhHHHHHHHhhhhhh
Q 037201 45 ENCLLIR--NQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 45 r~~Lc~~--CGrrf~t~~~L~kHFkqlHerE 73 (177)
+.+.|.. ||..|.+...|..|.+ +|..|
T Consensus 37 ~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~ 66 (79)
T 2dlk_A 37 KSFSCPEPACGKSFNFKKHLKEHMK-LHSDT 66 (79)
T ss_dssp CCEECSCTTTCCEESSHHHHHHHHH-HHHTS
T ss_pred CCeECCCCCCcCccCCHHHHHHHHH-HhCCC
Confidence 3455877 8888888888888875 56544
No 191
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=90.37 E-value=0.31 Score=38.23 Aligned_cols=46 Identities=22% Similarity=0.293 Sum_probs=38.8
Q ss_pred cceEEEEeCC---CchHHHHHHHHHcCccEEEEecCCchhhhhhh---cccc
Q 037201 123 FGCLMVVSDD---SNFVEVFQEATLRCLKMVVVGDMSDGALKRIA---NAFF 168 (177)
Q Consensus 123 v~clvLVSDd---sdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r~A---d~~~ 168 (177)
-|+++.+|-. .+..++++.|+++|.++|.|-+..++.|.+.| |..+
T Consensus 115 ~Dvvi~iS~SG~t~~~~~~~~~ak~~g~~vi~iT~~~~s~la~~a~~~d~~l 166 (201)
T 3trj_A 115 DDILLVITTSGDSENILSAVEEAHDLEMKVIALTGGSGGALQNMYNTDDIEL 166 (201)
T ss_dssp TCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEEETTCCGGGGTCCTTCEEE
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEECCCCCHHHHhhccCCEEE
Confidence 4778888864 45677888999999999999998788999999 9765
No 192
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=90.28 E-value=0.061 Score=39.78 Aligned_cols=28 Identities=14% Similarity=0.268 Sum_probs=18.6
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHhhhhh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQIHEG 72 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkqlHer 72 (177)
+.+.|..||..|.+...|..|.+..|..
T Consensus 77 k~~~C~~C~k~F~~~~~L~~H~~~hh~~ 104 (133)
T 2lt7_A 77 RRYQCLACGKSFINYQFMSSHIKSVHSQ 104 (133)
T ss_dssp CCEEESSSCCEESSHHHHHHHHHHHTCC
T ss_pred ccccCCCCCCCcCCHHHHHHHhHHhcCC
Confidence 3445777777777777777777766643
No 193
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=90.14 E-value=0.37 Score=36.44 Aligned_cols=46 Identities=17% Similarity=0.329 Sum_probs=37.6
Q ss_pred ceEEEEeCC---CchHHHHHHHHHcCccEEEEecCCchhhhhh---hccccc
Q 037201 124 GCLMVVSDD---SNFVEVFQEATLRCLKMVVVGDMSDGALKRI---ANAFFS 169 (177)
Q Consensus 124 ~clvLVSDd---sdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r~---Ad~~~s 169 (177)
|++|.+|-. .+..++++.|+++|.+||.|-+..+..|.+. ||..+.
T Consensus 111 DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~la~~~~~ad~~l~ 162 (196)
T 2yva_A 111 DVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIR 162 (196)
T ss_dssp CEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCHHHHTTCCTTSEEEE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCchhhhcccCCCEEEE
Confidence 677888764 4566788888999999999999887899999 887653
No 194
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=90.13 E-value=0.1 Score=36.33 Aligned_cols=32 Identities=19% Similarity=0.316 Sum_probs=26.7
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQKK 76 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr~K 76 (177)
++.+-|..||..|.+...|..|.+ +|..|+.-
T Consensus 23 ~kpy~C~~C~k~F~~~~~L~~H~~-~Ht~ekp~ 54 (88)
T 1x6f_A 23 NSTYQCKHCDSKLQSTAELTSHLN-IHNEEFQK 54 (88)
T ss_dssp CSCEECSSSCCEESSHHHHHHHHH-HHHHHHHH
T ss_pred CCCCcCCCCCCEeCCHHHHHHHHH-HhCCCCCc
Confidence 456779999999999999999975 78877643
No 195
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=90.10 E-value=0.052 Score=39.19 Aligned_cols=31 Identities=19% Similarity=0.200 Sum_probs=26.9
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||..|.+...|..|-..+|..|+
T Consensus 48 ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgek 78 (102)
T 2ghf_A 48 NSSYVCVECNFLTKRYDALSEHNLKYHPGEE 78 (102)
T ss_dssp SCCEEETTTTEEESSTHHHHTHHHHTSTTCC
T ss_pred CCCcCCCCCCcccCCHHHHHHHHHHhcCCCC
Confidence 4567799999999999999999777898775
No 196
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=90.07 E-value=0.065 Score=32.21 Aligned_cols=28 Identities=11% Similarity=0.080 Sum_probs=22.4
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
+.+-|..||..|.+...|..|.+ +|..|
T Consensus 28 ~~~~C~~C~~~f~~~~~l~~H~~-~h~~~ 55 (57)
T 1bbo_A 28 RPYHCTYCNFSFKTKGNLTKHMK-SKAHS 55 (57)
T ss_dssp CCEECSSSSCEESSHHHHHHHHH-SSSSC
T ss_pred CCccCCCCCchhcCHHHHHHHHH-Hhccc
Confidence 44669999999999999999965 45433
No 197
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=90.06 E-value=0.13 Score=34.94 Aligned_cols=26 Identities=15% Similarity=0.086 Sum_probs=16.0
Q ss_pred hhhhhcCCCcCChhHHHHHHHhhhhh
Q 037201 47 CLLIRNQGRFYNNDKLVNHFRQIHEG 72 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFkqlHer 72 (177)
+-|..||+.|.+...|.+|.+.-|..
T Consensus 66 ~~C~~C~~~f~~~~~l~~H~~~~~~~ 91 (110)
T 2csh_A 66 YECNICAKRFMWRDSFHRHVTSCTKS 91 (110)
T ss_dssp EECSSSCCEESCHHHHHHHHHHHHHH
T ss_pred eeCCCCcchhcCHHHHHHHHHHcccc
Confidence 34666666666666666666555443
No 198
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=89.98 E-value=0.11 Score=34.24 Aligned_cols=25 Identities=20% Similarity=0.191 Sum_probs=20.7
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHhhh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQIH 70 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkqlH 70 (177)
+.+.|..||+.|.+...|.+|.+ +|
T Consensus 74 ~~~~C~~C~~~f~~~~~l~~H~~-~H 98 (100)
T 2ebt_A 74 KPFQCGVCNRSFSRSDHLALHMK-RH 98 (100)
T ss_dssp CSCBCSSSCCBCSSHHHHHHHHH-HH
T ss_pred CCeECCCCcCccCCHHHHHHHHH-Hh
Confidence 44569999999999999999965 44
No 199
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.87 E-value=0.11 Score=34.14 Aligned_cols=28 Identities=21% Similarity=0.166 Sum_probs=24.3
Q ss_pred hhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 47 CLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
+-|..||+.|.+...|..|.+..|..++
T Consensus 26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~ 53 (95)
T 2ej4_A 26 RPKKSCDRTFSTMHELVTHVTMEHVGGP 53 (95)
T ss_dssp SSCCCCCCCCSSHHHHHHHHHHTTTCCT
T ss_pred CcccccccccCCHHHHHHHHHHhccCCC
Confidence 3499999999999999999888787664
No 200
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=89.80 E-value=0.13 Score=36.04 Aligned_cols=27 Identities=19% Similarity=0.086 Sum_probs=17.4
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHhhhhh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQIHEG 72 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkqlHer 72 (177)
+++.|..||+.|.+...|..|.+. |++
T Consensus 73 ~~~~C~~C~k~f~~~~~l~~H~~~-H~~ 99 (129)
T 2wbt_A 73 SQFVCPLCLMPFSSSVSLKQHIRY-TEH 99 (129)
T ss_dssp CSEECTTTCCEESSHHHHHHHHHH-TCC
T ss_pred CCeECCCCCcccCCHhHHHHHHHH-CCC
Confidence 445577777777777777777643 543
No 201
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=89.64 E-value=0.087 Score=33.56 Aligned_cols=30 Identities=17% Similarity=0.009 Sum_probs=24.5
Q ss_pred hhhhhhh--cCCCcCChhHHHHHHHhhhhhhh
Q 037201 45 ENCLLIR--NQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 45 r~~Lc~~--CGrrf~t~~~L~kHFkqlHerEr 74 (177)
+.+.|.. ||+.|.+...|..|.+..|..++
T Consensus 6 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~ 37 (79)
T 2dlk_A 6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQK 37 (79)
T ss_dssp SSEECSSTTTCCEESSHHHHHHHHHHGGGSCC
T ss_pred CCccCCCCCCcCccCCHHHHHHHHHHHhCCCC
Confidence 3455665 99999999999999998887653
No 202
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=89.54 E-value=0.1 Score=26.70 Aligned_cols=21 Identities=19% Similarity=0.199 Sum_probs=18.4
Q ss_pred hhhh--hcCCCcCChhHHHHHHH
Q 037201 47 CLLI--RNQGRFYNNDKLVNHFR 67 (177)
Q Consensus 47 ~Lc~--~CGrrf~t~~~L~kHFk 67 (177)
+.|. .||+.|.+...|..|.+
T Consensus 3 ~~C~~~~C~k~f~~~~~l~~H~~ 25 (29)
T 2ab3_A 3 YVCHFENCGRSFNDRRKLNRHKK 25 (29)
T ss_dssp EEECSTTTCEEESSHHHHHHHHG
T ss_pred CCCcCCcCcCccCCHHHHHHHHH
Confidence 4588 99999999999999964
No 203
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=89.38 E-value=0.18 Score=35.04 Aligned_cols=29 Identities=10% Similarity=0.007 Sum_probs=25.3
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEG 72 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHer 72 (177)
++.+.|..||+.|.+...|.+|...+|..
T Consensus 60 ~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~ 88 (96)
T 2ctd_A 60 QEMFTCHHCGKQLRSLAGMKYHVMANHNS 88 (96)
T ss_dssp CCCCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred CCCeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence 56677999999999999999997788864
No 204
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.25 E-value=0.11 Score=33.28 Aligned_cols=28 Identities=14% Similarity=-0.105 Sum_probs=23.2
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEG 72 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHer 72 (177)
++.+-|..||+.|.+...|.+|.+ +|..
T Consensus 5 ~k~~~C~~C~k~f~~~~~L~~H~~-~h~~ 32 (78)
T 2d9h_A 5 SSGLQCEICGFTCRQKASLNWHQR-KHAE 32 (78)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHH-HHHH
T ss_pred CcCeECCCCCCeeCCHHHHHHHHH-Hhhc
Confidence 456779999999999999999975 4554
No 205
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=89.09 E-value=0.12 Score=32.77 Aligned_cols=24 Identities=17% Similarity=0.169 Sum_probs=18.9
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQ 68 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkq 68 (177)
+.+.|..||..|.+...|.+|.+.
T Consensus 56 ~~~~C~~C~~~f~~~~~l~~H~~~ 79 (82)
T 2kmk_A 56 KPHKCQVCGKAFSQSSNLITHSRK 79 (82)
T ss_dssp CCEECTTTSCEESSHHHHHHHHHH
T ss_pred CCCcCCCcchhhCChHHHHHHHHh
Confidence 345588899999999999888653
No 206
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=89.02 E-value=0.12 Score=36.17 Aligned_cols=29 Identities=17% Similarity=0.137 Sum_probs=23.9
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|.+||..|.+...|.+|-+ +|..|
T Consensus 26 ~~~h~C~~Cgk~F~~~~~L~~H~~-~H~~~ 54 (85)
T 2lv2_A 26 AECHLCPVCGESFASKGAQERHLR-LLHAA 54 (85)
T ss_dssp CTTEECTTSCCEESSHHHHHHHHH-TTSCS
T ss_pred CCCEECCCCCCCcCcHHHHhhhhh-hccCC
Confidence 355779999999999999999976 46544
No 207
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=88.70 E-value=0.16 Score=33.39 Aligned_cols=23 Identities=17% Similarity=0.144 Sum_probs=12.0
Q ss_pred hhhhcCCCcCChhHHHHHHHhhh
Q 037201 48 LLIRNQGRFYNNDKLVNHFRQIH 70 (177)
Q Consensus 48 Lc~~CGrrf~t~~~L~kHFkqlH 70 (177)
.|..||..|.+...|.+|.+..|
T Consensus 60 ~c~~C~~~f~~~~~L~~H~~~~h 82 (88)
T 1llm_C 60 LEDKVEELLSKNYHLENEVARLK 82 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhhHHHHHHHH
Confidence 35555555555555555555544
No 208
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=88.60 E-value=0.099 Score=34.39 Aligned_cols=21 Identities=14% Similarity=0.044 Sum_probs=12.9
Q ss_pred hhhhhcCCCcCChhHHHHHHH
Q 037201 47 CLLIRNQGRFYNNDKLVNHFR 67 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFk 67 (177)
+.|..||..|.+...|.+|.+
T Consensus 37 ~~C~~C~~~f~~~~~l~~H~~ 57 (96)
T 2dmd_A 37 YKCKTCDYAAADSSSLNKHLR 57 (96)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred EeCCCCCCccCCHHHHHHHHH
Confidence 346666666666666666654
No 209
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=88.41 E-value=0.21 Score=33.87 Aligned_cols=19 Identities=16% Similarity=0.120 Sum_probs=10.0
Q ss_pred hhhhcCCCcCChhHHHHHH
Q 037201 48 LLIRNQGRFYNNDKLVNHF 66 (177)
Q Consensus 48 Lc~~CGrrf~t~~~L~kHF 66 (177)
.|..||..|.+...|..|.
T Consensus 44 ~C~~C~~~f~~~~~l~~H~ 62 (107)
T 1wjp_A 44 VCPYCSLRFFSPELKQEHE 62 (107)
T ss_dssp CCTTTCCCBSSHHHHHHHH
T ss_pred cCCCCCCccCCHHHHHHHH
Confidence 3555555555555555554
No 210
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=88.19 E-value=0.12 Score=33.46 Aligned_cols=27 Identities=26% Similarity=0.345 Sum_probs=20.8
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHhhhhh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQIHEG 72 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkqlHer 72 (177)
+.+.|..||..|.+...|..|.+ .|..
T Consensus 33 ~~~~C~~C~~~f~~~~~l~~H~~-~h~~ 59 (90)
T 1a1h_A 33 KPFQCRICMRNFSRSDHLTTHIR-THTG 59 (90)
T ss_dssp CCEECTTTCCEESCHHHHHHHHH-HHHC
T ss_pred CCccCCCCCcccCCHHHHHHHHH-HcCC
Confidence 34569999999999999999976 4543
No 211
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=87.57 E-value=0.15 Score=34.61 Aligned_cols=21 Identities=29% Similarity=0.308 Sum_probs=12.7
Q ss_pred hhhhhcCCCcCChhHHHHHHH
Q 037201 47 CLLIRNQGRFYNNDKLVNHFR 67 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFk 67 (177)
+.|..||+.|.+...|..|.+
T Consensus 67 ~~C~~C~~~f~~~~~l~~H~~ 87 (119)
T 2jp9_A 67 FQCKTCQRKFSRSDHLKTHTR 87 (119)
T ss_dssp EECTTTCCEESCHHHHHHHHH
T ss_pred ccCCccCchhCCHHHHHHHHH
Confidence 346666666666666666654
No 212
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=87.50 E-value=1 Score=37.99 Aligned_cols=61 Identities=8% Similarity=0.040 Sum_probs=46.7
Q ss_pred HHhhh-hcEEEEEe-------------ec-ceEEEEeCC---CchHHHHHHHHHcCccEEEEecCCchhhhhhhccccc
Q 037201 109 DELKR-AWFCVRNV-------------RF-GCLMVVSDD---SNFVEVFQEATLRCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 109 ~eLrR-AGv~Vr~V-------------~v-~clvLVSDd---sdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
.-|.+ .|+.|..+ .- |++|.+|-. .+-.++++.|+++|.++|.|-+..++.|.+.||.-+.
T Consensus 72 ~~l~~~~g~~v~~~~~~~~~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ak~~Ga~vIaIT~~~~S~La~~ad~~l~ 150 (342)
T 1j5x_A 72 YYFERVLKIRTKAIPAGEVAFQKIPDLEERGLAFLFSRTGNTTEVLLANDVLKKRNHRTIGITIEEESRLAKESDLPLV 150 (342)
T ss_dssp HHHHHHHCCEEEEEEHHHHHTTCSCCCCSSEEEEEECSSSCCHHHHHHHHHHHHTTEEEEEEESCTTSHHHHHSSEEEE
T ss_pred HHHHHhhCCeEEEECchHHHhcCcccCCCCeEEEEEcCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHhcCEEEE
Confidence 34555 67766655 22 778888854 4667778888999999999999888899999997653
No 213
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=87.33 E-value=0.14 Score=32.85 Aligned_cols=26 Identities=8% Similarity=0.123 Sum_probs=22.0
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHhhh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQIH 70 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkqlH 70 (177)
+.+.|..||..|.+...|..|.+.-|
T Consensus 46 ~~~~C~~C~~~f~~~~~L~~H~~~h~ 71 (86)
T 1x6h_A 46 AAFVCSKCGKTFTRRNTMARHADNCA 71 (86)
T ss_dssp CCEECSSSCCEESCHHHHHHHHHHCC
T ss_pred cceECCCCCChhCCHHHHHHHHHHcc
Confidence 45779999999999999999986533
No 214
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=86.85 E-value=0.14 Score=32.41 Aligned_cols=29 Identities=21% Similarity=0.379 Sum_probs=21.5
Q ss_pred hhhhhhhh--cCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIR--NQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~--CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|.. ||+.|.+...|..|.+ +|..|
T Consensus 15 ~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~ 45 (72)
T 2epa_A 15 IRSHICSHPGCGKTYFKSSHLKAHTR-THTGE 45 (72)
T ss_dssp CCCEECSSTTTCCEESSHHHHHHHHH-HHSSS
T ss_pred cCceeCCCCCCccccCCHHHHHHHHH-hcCCC
Confidence 45567877 8888888888888874 56544
No 215
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=86.79 E-value=0.21 Score=31.57 Aligned_cols=21 Identities=14% Similarity=0.002 Sum_probs=15.9
Q ss_pred hhhhcCCCcCChhHHHHHHHh
Q 037201 48 LLIRNQGRFYNNDKLVNHFRQ 68 (177)
Q Consensus 48 Lc~~CGrrf~t~~~L~kHFkq 68 (177)
.|..||..|.+...|..|.+.
T Consensus 3 ~C~~C~~~f~~~~~l~~H~~~ 23 (82)
T 2kmk_A 3 DCKICGKSFKRSSTLSTHLLI 23 (82)
T ss_dssp ECSSSCCEESSHHHHHHHHHH
T ss_pred cCCCCcccccCchhHHHHHHH
Confidence 477788888888888888764
No 216
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.70 E-value=0.32 Score=32.72 Aligned_cols=21 Identities=19% Similarity=0.241 Sum_probs=19.7
Q ss_pred hhhhhcCCCcCChhHHHHHHH
Q 037201 47 CLLIRNQGRFYNNDKLVNHFR 67 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFk 67 (177)
+.|+.||..|+-.+.|++|.|
T Consensus 13 ~~CPrCn~~f~~~~sLr~Hmk 33 (49)
T 2e72_A 13 KICPRCNAQFRVTEALRGHMC 33 (49)
T ss_dssp CCCTTTCCCCSSHHHHHHHHH
T ss_pred eeCCcccccccchHHHHhhhh
Confidence 569999999999999999988
No 217
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=86.69 E-value=0.15 Score=37.87 Aligned_cols=21 Identities=24% Similarity=0.192 Sum_probs=11.9
Q ss_pred hhhhhcCCCcCChhHHHHHHH
Q 037201 47 CLLIRNQGRFYNNDKLVNHFR 67 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFk 67 (177)
+.|..||..|.+...|..|.+
T Consensus 134 ~~C~~C~~~f~~~~~L~~H~~ 154 (190)
T 2i13_A 134 YKCPECGKSFSREDNLHTHQR 154 (190)
T ss_dssp EECTTTCCEESCHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 345556666666556655544
No 218
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=86.42 E-value=0.14 Score=33.70 Aligned_cols=28 Identities=21% Similarity=0.171 Sum_probs=22.5
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
+.+-|..||..|.+...|.+|.+ .|..|
T Consensus 63 ~~~~C~~C~~~f~~~~~l~~H~~-~h~~~ 90 (96)
T 2dmd_A 63 RPFKCQICPYASRNSSQLTVHLR-SHTGD 90 (96)
T ss_dssp CCEECSSSSCEESSHHHHHHHHT-TCCSC
T ss_pred CCccCCCCCCccCCHHHHHHHHH-HhcCC
Confidence 44569999999999999999976 45443
No 219
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=86.33 E-value=0.41 Score=37.94 Aligned_cols=48 Identities=19% Similarity=0.236 Sum_probs=38.0
Q ss_pred ecceEEEEeCC---CchHHHHHHHHHcCccEEEEecCCch-----------hhhhhhccccc
Q 037201 122 RFGCLMVVSDD---SNFVEVFQEATLRCLKMVVVGDMSDG-----------ALKRIANAFFS 169 (177)
Q Consensus 122 ~v~clvLVSDd---sdf~~~lr~Ar~r~l~TVVVGd~~~~-----------~L~r~Ad~~~s 169 (177)
.-|++|++|-. .+..++++.|+++|.++|.|-+..+. .|.+.||+.+.
T Consensus 108 ~~Dv~I~iS~SG~t~~~i~~~~~Ak~~G~~vI~IT~~~~s~~~~~~~~~g~~La~~aD~~l~ 169 (243)
T 3cvj_A 108 NKDVIMIISNSGRNTVPVEMAIESRNIGAKVIAMTSMKHSQKVTSRHKSGKKLYEYADVVLD 169 (243)
T ss_dssp TTCEEEEECSSCCSHHHHHHHHHHHHHTCEEEEEECHHHHHHSCCCSTTSCCGGGGCSEEEE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccccCCCcCcHHHhCCEEEE
Confidence 34778888854 46677888889999999999887433 89999998773
No 220
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=86.13 E-value=0.18 Score=32.53 Aligned_cols=23 Identities=17% Similarity=0.247 Sum_probs=17.6
Q ss_pred hhhhhhhcCCCcCChhHHHHHHH
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFR 67 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFk 67 (177)
+.+-|..||+.|.+...|.+|.+
T Consensus 64 ~~~~C~~C~~~f~~~~~l~~H~~ 86 (89)
T 2wbs_A 64 RPFQCQKCDRAFSRSDHLALHMK 86 (89)
T ss_dssp CCEECSSSSCEESSHHHHHHHGG
T ss_pred CCccCCCCCcccCCHHHHHHHHH
Confidence 33458888888888888888854
No 221
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=86.11 E-value=0.24 Score=34.57 Aligned_cols=27 Identities=15% Similarity=0.217 Sum_probs=23.7
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIH 70 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlH 70 (177)
++.+.|..||+.|.+...|.+|.+.-|
T Consensus 98 ~~~~~C~~C~k~f~~~~~l~~H~~~h~ 124 (129)
T 2wbt_A 98 EHTKVCPVCKKEFTSTDSALDHVCKKH 124 (129)
T ss_dssp CCCCBCTTTCCBCSSHHHHHHHHHHTT
T ss_pred CCCCCCCCCCcccCCHHHHHHHHHHHC
Confidence 667779999999999999999987655
No 222
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=85.95 E-value=0.21 Score=35.57 Aligned_cols=22 Identities=23% Similarity=0.421 Sum_probs=15.2
Q ss_pred hhhhhcCCCcCChhHHHHHHHh
Q 037201 47 CLLIRNQGRFYNNDKLVNHFRQ 68 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFkq 68 (177)
+-|..||..|.+...|.+|.+.
T Consensus 4 ~~C~~C~~~f~~~~~L~~H~~~ 25 (155)
T 2gli_A 4 CRWDGCSQEFDSQEQLVHHINS 25 (155)
T ss_dssp CCBTTCCCBCSCHHHHHHHHHH
T ss_pred CCcCCCccccCCHHHHHHHHHh
Confidence 4466677777777777777765
No 223
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=85.77 E-value=0.24 Score=35.39 Aligned_cols=30 Identities=20% Similarity=0.134 Sum_probs=26.1
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
..+-|..||+.|.+...|..|.+..|..+.
T Consensus 24 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~ 53 (155)
T 2rpc_A 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGP 53 (155)
T ss_dssp CSSSCCCCCCCBSSHHHHHHHHHTTTSCCT
T ss_pred cccccccCCcccCCHHHHHHHHHhhcCCCc
Confidence 456699999999999999999999897654
No 224
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.45 E-value=0.24 Score=33.78 Aligned_cols=25 Identities=8% Similarity=0.022 Sum_probs=22.2
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQ 68 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkq 68 (177)
++.+.|..||+.|.+...|..|.+.
T Consensus 17 ~~~~~C~~C~k~f~~~~~L~~H~~~ 41 (115)
T 2dmi_A 17 ASKFRCKDCSAAYDTLVELTVHMNE 41 (115)
T ss_dssp CCSEEBSSSSCEESSHHHHHHHHHH
T ss_pred CCCEECCccCchhcCHHHHHHHHHH
Confidence 4567899999999999999999885
No 225
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=85.25 E-value=0.2 Score=31.53 Aligned_cols=29 Identities=31% Similarity=0.476 Sum_probs=23.1
Q ss_pred hhhhhhh--hcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLI--RNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~--~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|. .||+.|.+...|..|.+ +|..+
T Consensus 17 ~~~~~C~~~~C~k~f~~~~~l~~H~~-~h~~~ 47 (73)
T 1f2i_G 17 MRPYACPVESCDRRFSRSDELTRHIR-IHTGQ 47 (73)
T ss_dssp CCCEECSSTTBCCEESSHHHHHHHHH-HHHCC
T ss_pred CCccCCcCCCCCCccCCHHHHHHHHH-hhCCC
Confidence 3557797 59999999999999964 67654
No 226
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=84.97 E-value=0.25 Score=32.31 Aligned_cols=24 Identities=21% Similarity=0.195 Sum_probs=20.7
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQ 68 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkq 68 (177)
+.+.|..||+.|.+...|..|.+.
T Consensus 34 ~~~~C~~C~~~f~~~~~l~~H~~~ 57 (95)
T 2yt9_A 34 KPYSCPVCGLRFKRKDRMSYHVRS 57 (95)
T ss_dssp CSEECSSSCCEESCHHHHHHHHHH
T ss_pred CCCcCCCCCCccCCHHHHHHHHHH
Confidence 446699999999999999999864
No 227
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=84.60 E-value=0.22 Score=33.76 Aligned_cols=28 Identities=25% Similarity=0.261 Sum_probs=19.9
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
+.+.|..||..|.+...|..|.+ +|..+
T Consensus 36 ~~~~C~~C~~~f~~~~~l~~H~~-~h~~~ 63 (110)
T 2csh_A 36 RPYGCGVCGKKFKMKHHLVGHMK-IHTGI 63 (110)
T ss_dssp CSEECTTTSCEESSSHHHHHHHT-TTCCC
T ss_pred cCccCCCCCcccCCHHHHHHHHH-HcCCC
Confidence 44558888888888888888864 45443
No 228
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=84.51 E-value=1 Score=38.52 Aligned_cols=48 Identities=10% Similarity=0.059 Sum_probs=39.1
Q ss_pred ecceEEEEeCC---CchHHHHHHHHHcCccEEEEecCCchhhhhhhccccc
Q 037201 122 RFGCLMVVSDD---SNFVEVFQEATLRCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 122 ~v~clvLVSDd---sdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
.-|.+|.+|-. .+-.++++.|+++|.+||.|-+..++.|.+.||.-+.
T Consensus 107 ~~dlvI~iS~SG~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~La~~ad~~l~ 157 (375)
T 2zj3_A 107 RDDVCFFLSQSGETADTLMGLRYCKERGALTVGITNTVGSSISRETDCGVH 157 (375)
T ss_dssp TTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHSSEEEE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHcCCcEEEEECCCCChHHHhCCEeee
Confidence 34577888864 4566778889999999999999888899999998764
No 229
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=84.34 E-value=2 Score=34.10 Aligned_cols=59 Identities=25% Similarity=0.391 Sum_probs=42.6
Q ss_pred HhhhhcEEEEEe------------------ecceEEEEe-CCCc-hHHHHHHHHHcCccEEEEecCCchhhhhhhcccc
Q 037201 110 ELKRAWFCVRNV------------------RFGCLMVVS-DDSN-FVEVFQEATLRCLKMVVVGDMSDGALKRIANAFF 168 (177)
Q Consensus 110 eLrRAGv~Vr~V------------------~v~clvLVS-Ddsd-f~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~ 168 (177)
|....||-|+|| ..|.+|+|. ||.. ..+++++|+++|+...||=+.-|..-..-|.-.|
T Consensus 47 efekqgvdvrtvedkedfrenireiwerypqldvvvivttddkewikdfieeakergvevfvvynnkdddrrkeaqqef 125 (162)
T 2l82_A 47 EFEKQGVDVRTVEDKEDFRENIREIWERYPQLDVVVIVTTDDKEWIKDFIEEAKERGVEVFVVYNNKDDDRRKEAQQEF 125 (162)
T ss_dssp HHHTTTCEEEECCSHHHHHHHHHHHHHHCTTCCEEEEEECCCHHHHHHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHH
T ss_pred HHHHcCCceeeeccHHHHHHHHHHHHHhCCCCcEEEEEecCcHHHHHHHHHHHHhcCcEEEEEecCCCchhHHHHHHHh
Confidence 455679999999 677776665 4544 4689999999999999988776555555554433
No 230
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=84.07 E-value=1 Score=37.65 Aligned_cols=49 Identities=10% Similarity=0.077 Sum_probs=40.9
Q ss_pred ecceEEEEeCC---CchHHHHHHHHHcCccEEEEecCCchhhhhhhccccch
Q 037201 122 RFGCLMVVSDD---SNFVEVFQEATLRCLKMVVVGDMSDGALKRIANAFFSW 170 (177)
Q Consensus 122 ~v~clvLVSDd---sdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~sW 170 (177)
.-|++|.+|-. .+-.++++.|+++|.+||.|-+..+..|.+.||+.+.-
T Consensus 140 ~~DvvI~IS~SG~T~~vi~al~~Ak~~Ga~~IaIT~~~~S~La~~AD~~I~~ 191 (306)
T 1nri_A 140 KNDVLVGIAASGRTPYVIAGLQYAKSLGALTISIASNPKSEMAEIADIAIET 191 (306)
T ss_dssp TTSEEEEECTTSCCHHHHHHHHHHHHHTCEEEEEESSTTCHHHHHSSEEEEC
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCChHHHhCCEEEEc
Confidence 45778888854 45678889999999999999998888999999987754
No 231
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=83.42 E-value=0.41 Score=32.46 Aligned_cols=24 Identities=8% Similarity=0.192 Sum_probs=17.2
Q ss_pred hhhhhhhcCCCcCChhHHHHHHHh
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFRQ 68 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFkq 68 (177)
+.+.|..||..|.+...|..|.+.
T Consensus 34 ~~~~C~~C~~~f~~~~~l~~H~~~ 57 (124)
T 2dlq_A 34 KPFECPKCGKCYFRKENLLEHEAR 57 (124)
T ss_dssp CSCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CCeECCCCCchhcCHHHHHHHHhh
Confidence 345577777777777777777665
No 232
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.13 E-value=0.24 Score=31.17 Aligned_cols=27 Identities=7% Similarity=-0.068 Sum_probs=22.2
Q ss_pred hhhhhhh-hcCCCcCChhHHHHHHHhhhh
Q 037201 44 KENCLLI-RNQGRFYNNDKLVNHFRQIHE 71 (177)
Q Consensus 44 er~~Lc~-~CGrrf~t~~~L~kHFkqlHe 71 (177)
++.+.|. .||..|.....|.+|-+ +|-
T Consensus 34 ~~p~~C~~~C~k~f~~~~~L~~H~~-~hc 61 (66)
T 2eod_A 34 RLPVACPNQCGVGTVAREDLPGHLK-DSC 61 (66)
T ss_dssp SSEEECTTCCSCCEEETTTHHHHHH-TTS
T ss_pred CcCccCCcccCcccccHHHHHHHHH-hhc
Confidence 4567799 99999999999999964 454
No 233
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=82.46 E-value=0.26 Score=33.86 Aligned_cols=21 Identities=19% Similarity=0.150 Sum_probs=12.6
Q ss_pred hhhhhcCCCcCChhHHHHHHH
Q 037201 47 CLLIRNQGRFYNNDKLVNHFR 67 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFk 67 (177)
+.|..||..|.+...|..|.+
T Consensus 35 ~~C~~C~~~f~~~~~l~~H~~ 55 (124)
T 1ubd_C 35 HVCAECGKAFVESSKLKRHQL 55 (124)
T ss_dssp EECTTTCCEESSHHHHHHHGG
T ss_pred eECCCCCchhCCHHHHHHHHH
Confidence 446666666666666666644
No 234
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.41 E-value=0.029 Score=35.00 Aligned_cols=29 Identities=7% Similarity=0.028 Sum_probs=23.2
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
++.+.|..||..|.+...|..|.+ +|..|
T Consensus 37 ~~~~~C~~C~~~f~~~~~l~~H~~-~H~~~ 65 (73)
T 2ctu_A 37 RKTPMCEKCRKDSCQEAALNKDEG-NESGK 65 (73)
T ss_dssp SSSCCCHHHHHTCSCCCSSCCCSS-CCCCC
T ss_pred CCCCCCCCCChhhcCHHHHHHHHH-hhcCC
Confidence 566779999999999999999954 46544
No 235
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotr; structural genomics, joint center for structural genomics; HET: MSE; 1.23A {Salmonella typhimurium}
Probab=82.34 E-value=1.4 Score=37.28 Aligned_cols=83 Identities=13% Similarity=0.119 Sum_probs=56.7
Q ss_pred chHHHHHHHHhhcC--CC-C---CCCch--------HHhhh-hcEEEEEe--------------ecceEEEEeCC---Cc
Q 037201 87 KMEKYKMAVSAILT--PK-V---GYGFA--------DELKR-AWFCVRNV--------------RFGCLMVVSDD---SN 134 (177)
Q Consensus 87 K~~KY~~Aar~vl~--pk-v---gygLa--------~eLrR-AGv~Vr~V--------------~v~clvLVSDd---sd 134 (177)
..+..++++..+.. ++ + |.|-. .-|.+ .|+.|... .-|.+|.+|-. .+
T Consensus 38 ~~~~i~~~~~~i~~~~~~~I~i~G~G~S~~~a~~~~~~l~~~~g~~~~~~~~~e~~~~~~~~l~~~dlvI~iS~SG~t~e 117 (355)
T 2a3n_A 38 ARQKAEQVADEIYQAGFSSLFFASVGGSLAPMMAINEFAKELTTLPVYVEQAAELIHKGNKRLNKDSVVITLSKSGDTKE 117 (355)
T ss_dssp THHHHHHHHHHHHHHCCSCEEEEECGGGHHHHHHHHHHHHHHCCSCEEEEEHHHHHHHCCTTCCTTCEEEEECSSSCCHH
T ss_pred hHHHHHHHHHHHHhCCCCEEEEEEccHHHHHHHHHHHHHHhhcCCeEEEcCcHHHHhhchhcCCCCCEEEEEeCCCCCHH
Confidence 34555666665554 33 2 55522 23556 67776654 23567777754 45
Q ss_pred hHHHHHHHHHcCccEEEEecCCchhhhhhhccccc
Q 037201 135 FVEVFQEATLRCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 135 f~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
-.++++.|+++|.+||.|-+..++.|.+.||.-+.
T Consensus 118 ~~~a~~~ak~~Ga~vi~IT~~~~S~La~~ad~~l~ 152 (355)
T 2a3n_A 118 SVAIAEWCKAQGIRVVAITKNADSPLAQAATWHIP 152 (355)
T ss_dssp HHHHHHHHHHTTCEEEEEESCTTSHHHHTCSEEEE
T ss_pred HHHHHHHHHHCCCeEEEEECCCCChhhHhCCEEEE
Confidence 66778888999999999999888899999997653
No 236
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=82.24 E-value=0.5 Score=31.57 Aligned_cols=23 Identities=17% Similarity=0.128 Sum_probs=13.9
Q ss_pred hhhhhhhcCCCcCChhHHHHHHH
Q 037201 45 ENCLLIRNQGRFYNNDKLVNHFR 67 (177)
Q Consensus 45 r~~Lc~~CGrrf~t~~~L~kHFk 67 (177)
+.+.|..||..|.+...|..|.+
T Consensus 16 ~~~~C~~C~~~f~~~~~l~~H~~ 38 (106)
T 2ee8_A 16 KEFICKFCGRHFTKSYNLLIHER 38 (106)
T ss_dssp CCCBCSSSCCBCSSHHHHHHHHH
T ss_pred cCeECCCCCCccCCHHHHHHHHH
Confidence 34456666666666666666654
No 237
>2aml_A SIS domain protein; 46906266, LMO0035 protein, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=81.93 E-value=1.4 Score=37.63 Aligned_cols=47 Identities=6% Similarity=0.189 Sum_probs=38.2
Q ss_pred cceEEEEeCC---CchHHHHHHHHHc-CccEEEEecCCchhhhhhhccccc
Q 037201 123 FGCLMVVSDD---SNFVEVFQEATLR-CLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 123 v~clvLVSDd---sdf~~~lr~Ar~r-~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
-|.+|.+|=. .+-.++++.|+++ |.++|.|-+..++.|.+.||.-+.
T Consensus 98 ~dlvI~iS~SG~T~e~l~a~~~ak~~~Ga~vIaIT~~~~S~La~~ad~~l~ 148 (373)
T 2aml_A 98 LDLVIGISQSGQSTSTISALERVKKEASVPVVALTSDVTSEIAEFADITLD 148 (373)
T ss_dssp CCEEEEECSSSCBHHHHHHHHHHHHHCCCCEEEEESCTTSGGGGGCSEEEE
T ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhCCCcEEEEECCCCChHHHhcCccee
Confidence 3667777754 4566778888899 999999999888899999998663
No 238
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=81.81 E-value=0.24 Score=35.47 Aligned_cols=19 Identities=21% Similarity=0.051 Sum_probs=9.7
Q ss_pred hhh--cCCCcCChhHHHHHHH
Q 037201 49 LIR--NQGRFYNNDKLVNHFR 67 (177)
Q Consensus 49 c~~--CGrrf~t~~~L~kHFk 67 (177)
|.. ||..|.+...|.+|.+
T Consensus 93 C~~~~C~~~f~~~~~L~~H~~ 113 (155)
T 2rpc_A 93 CPFPGCGKIFARSENLKIHKR 113 (155)
T ss_dssp CSCTTTCCEESCHHHHHHHHT
T ss_pred CCcCCCCCccCCHHHHHHHHH
Confidence 544 5555555555555543
No 239
>2poc_A D-fructose-6- PH, isomerase domain of glutamine-fructose-6-phosphat transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans} PDB: 2put_A* 2puv_A* 2puw_A*
Probab=81.65 E-value=1.6 Score=37.14 Aligned_cols=47 Identities=13% Similarity=0.034 Sum_probs=38.5
Q ss_pred cceEEEEeCC---CchHHHHHHHHHcCccEEEEecCCchhhhhhhccccc
Q 037201 123 FGCLMVVSDD---SNFVEVFQEATLRCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 123 v~clvLVSDd---sdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
-|.+|.+|-. .+-.++++.|+++|.+||.|-+..++.|.+.||.-+.
T Consensus 98 ~dlvI~iS~SG~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~La~~ad~~l~ 147 (367)
T 2poc_A 98 DDTCVFVSQSGETADSILALQYCLERGALTVGIVNSVGSSMSRQTHCGVH 147 (367)
T ss_dssp TEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSTTSHHHHHSSEEEE
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEECCCCChHHHhCCEEEE
Confidence 3567777754 4567788899999999999999888899999998664
No 240
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=81.35 E-value=2.4 Score=32.59 Aligned_cols=49 Identities=18% Similarity=0.139 Sum_probs=40.0
Q ss_pred CchHHhhhhcEEEEEe-------------------ecceEEEEeCCCchHHHHHHHHHcCccEEEEecCC
Q 037201 106 GFADELKRAWFCVRNV-------------------RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V-------------------~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
|+..++++.|+.+... ++|.||+.+.+. .+.++.+.+.++..|+|+...
T Consensus 28 gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~--~~~~~~l~~~~iPvV~i~~~~ 95 (276)
T 3jy6_A 28 GISSILESRGYIGVLFDANADIEREKTLLRAIGSRGFDGLILQSFSN--PQTVQEILHQQMPVVSVDREM 95 (276)
T ss_dssp HHHHHHHTTTCEEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESSCC--HHHHHHHHTTSSCEEEESCCC
T ss_pred HHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCc--HHHHHHHHHCCCCEEEEeccc
Confidence 4567777778777665 889999988777 889999999999999998753
No 241
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=81.15 E-value=0.61 Score=29.47 Aligned_cols=25 Identities=16% Similarity=0.123 Sum_probs=18.5
Q ss_pred hh--hhcCCCcCChhHHHHHHHhhhhhh
Q 037201 48 LL--IRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 48 Lc--~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
.| ..||..|.+...|..|.+ .|..|
T Consensus 3 ~C~~~~C~~~f~~~~~l~~H~~-~h~~~ 29 (85)
T 2j7j_A 3 VCHFENCGKAFKKHNQLKVHQF-SHTQQ 29 (85)
T ss_dssp ECCSTTCCCEESSHHHHHHHHH-HHHTT
T ss_pred cCCCCCCCcccCCHHHHHHHHH-HhCCC
Confidence 47 778888888888888864 56543
No 242
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=80.71 E-value=1.8 Score=36.37 Aligned_cols=47 Identities=11% Similarity=0.000 Sum_probs=38.7
Q ss_pred cceEEEEeCC---CchHHHHHHHHHcCccEEEEecCCchhhhhhhccccc
Q 037201 123 FGCLMVVSDD---SNFVEVFQEATLRCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 123 v~clvLVSDd---sdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
-|++|.+|-. .|-..+++.|+++|.+||.|-+..++.|.+.||.-+.
T Consensus 75 ~dlvI~iS~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l~ 124 (329)
T 3eua_A 75 KSLVILCSHSGNTPETVKAAAFARGKGALTIAMTFKPESPLAQEAQYVAQ 124 (329)
T ss_dssp TEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHHHSSEEEE
T ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHCCCCEEEEECCCCChHHHhCCEEEE
Confidence 3567778765 4566778889999999999999888999999998763
No 243
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=80.58 E-value=0.41 Score=33.97 Aligned_cols=24 Identities=17% Similarity=0.322 Sum_probs=14.0
Q ss_pred hhhhh--cCCCcCChhHHHHHHHhhh
Q 037201 47 CLLIR--NQGRFYNNDKLVNHFRQIH 70 (177)
Q Consensus 47 ~Lc~~--CGrrf~t~~~L~kHFkqlH 70 (177)
+.|.. ||..|.+...|.+|.+..|
T Consensus 129 ~~C~~~~C~~~f~~~~~L~~H~~~hh 154 (155)
T 2gli_A 129 YVCKLPGCTKRYTDPSSLRKHVKTVH 154 (155)
T ss_dssp EECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred eeCCCCCCccccCCHHHHHHHHHhhc
Confidence 44655 6666666666666655443
No 244
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=80.36 E-value=0.62 Score=31.42 Aligned_cols=23 Identities=26% Similarity=0.287 Sum_probs=15.3
Q ss_pred hhhhh--hcCCCcCChhHHHHHHHh
Q 037201 46 NCLLI--RNQGRFYNNDKLVNHFRQ 68 (177)
Q Consensus 46 ~~Lc~--~CGrrf~t~~~L~kHFkq 68 (177)
.+.|. .||..|.+...|..|.+.
T Consensus 36 ~~~C~~~~C~~~f~~~~~l~~H~~~ 60 (119)
T 2jp9_A 36 PYQCDFKDCERRFSRSDQLKRHQRR 60 (119)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHH
T ss_pred CccCCCCCCcCccCCHHHHHHHHHH
Confidence 34476 577777777777777653
No 245
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=80.06 E-value=2.2 Score=36.26 Aligned_cols=47 Identities=11% Similarity=0.119 Sum_probs=38.8
Q ss_pred cceEEEEeCC---CchHHHHHHHHHcCccEEEEecCCchhhhhhhccccc
Q 037201 123 FGCLMVVSDD---SNFVEVFQEATLRCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 123 v~clvLVSDd---sdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
-|++|.+|-. .|-.++++.|+++|.+||.|-+..++.|.+.||..+.
T Consensus 83 ~dlvI~iS~SG~T~e~l~a~~~ak~~ga~~iaIT~~~~S~La~~aD~~l~ 132 (352)
T 3g68_A 83 NTLVVGVSQGGSSYSTYNAMKLAEDKGCKIASMAGCKNALIDEISDYILT 132 (352)
T ss_dssp TEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSTTCGGGGGCSEECC
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEeCCCCChHHHhCCEEEE
Confidence 4567778765 4566788889999999999999888999999998765
No 246
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=80.06 E-value=0.42 Score=32.76 Aligned_cols=16 Identities=19% Similarity=0.328 Sum_probs=8.2
Q ss_pred cCCCcCChhHHHHHHH
Q 037201 52 NQGRFYNNDKLVNHFR 67 (177)
Q Consensus 52 CGrrf~t~~~L~kHFk 67 (177)
||+.|.+...|.+|.+
T Consensus 100 C~~~f~~~~~L~~H~~ 115 (124)
T 1ubd_C 100 CNKKFAQSTNLKSHIL 115 (124)
T ss_dssp CCCCCSSTTTTHHHHH
T ss_pred CCCccCCHHHHHHHHH
Confidence 5555555555555543
No 247
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=79.99 E-value=0.58 Score=29.59 Aligned_cols=21 Identities=19% Similarity=0.124 Sum_probs=12.7
Q ss_pred hhhhh--cCCCcCChhHHHHHHH
Q 037201 47 CLLIR--NQGRFYNNDKLVNHFR 67 (177)
Q Consensus 47 ~Lc~~--CGrrf~t~~~L~kHFk 67 (177)
+.|.. ||..|.+...|..|.+
T Consensus 32 ~~C~~~~C~~~f~~~~~l~~H~~ 54 (85)
T 2j7j_A 32 YECPHEGCDKRFSLPSRLKRHEK 54 (85)
T ss_dssp EECCSTTCCCEESSHHHHHHHHH
T ss_pred eeCCCCCCcCccCCHHHHHHHHH
Confidence 44655 6666666666666654
No 248
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.94 E-value=0.41 Score=30.03 Aligned_cols=24 Identities=21% Similarity=0.101 Sum_probs=20.8
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQ 68 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkq 68 (177)
++.+.|..||..|. ...|.+|-+.
T Consensus 8 ~~~~~C~~C~k~f~-~~~L~~H~~~ 31 (66)
T 2eod_A 8 KRTQPCTYCTKEFV-FDTIQSHQYQ 31 (66)
T ss_dssp CCEEECSSSCCEEE-HHHHHHHHHH
T ss_pred CCCeeccccCCccC-HHHHHHHHHH
Confidence 45677999999999 9999999765
No 249
>3knz_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 2.50A {Salmonella enterica subsp}
Probab=79.57 E-value=2.3 Score=36.58 Aligned_cols=48 Identities=8% Similarity=0.088 Sum_probs=39.7
Q ss_pred ecceEEEEeCC---CchHHHHHHHHHcCccEEEEecCCchhhhhhhccccc
Q 037201 122 RFGCLMVVSDD---SNFVEVFQEATLRCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 122 ~v~clvLVSDd---sdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
.-|++|.+|-. .|-..+++.|+++|.+||.|-+..++.|.+.||.-+.
T Consensus 97 ~~dlvI~iS~SGeT~e~l~a~~~ak~~Ga~~IaIT~~~~S~La~~aD~~l~ 147 (366)
T 3knz_A 97 GKALVVGISQGGGSLSTLAAMERARNVGHITASMAGVAPATIDRAADYILT 147 (366)
T ss_dssp CSEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSSSCGGGGGCSEECC
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHcCCCEEEEECCCCChhhhhcCEEEe
Confidence 34667888864 4667788899999999999999888999999998764
No 250
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=78.98 E-value=3.1 Score=31.96 Aligned_cols=51 Identities=16% Similarity=0.242 Sum_probs=39.9
Q ss_pred CchHHhhhhcEEEEEe-------------------ecceEEEEe-CCCchHHHHHHHHHcCccEEEEecCC
Q 037201 106 GFADELKRAWFCVRNV-------------------RFGCLMVVS-DDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V-------------------~v~clvLVS-Ddsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
|+..++++.|+.+... ++|.||+.+ +.+++.++++.+.+.++..|+++...
T Consensus 29 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 99 (293)
T 3l6u_A 29 AFKAEAKANKYEALVATSQNSRISEREQILEFVHLKVDAIFITTLDDVYIGSAIEEAKKAGIPVFAIDRMI 99 (293)
T ss_dssp HHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHHHTTCSEEEEECSCTTTTHHHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHcCCCEEEecCCC
Confidence 4566777778877765 789888875 45556789999999999999998654
No 251
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=78.87 E-value=3.1 Score=32.25 Aligned_cols=51 Identities=14% Similarity=0.192 Sum_probs=40.1
Q ss_pred CchHHhhhhcEEEEEe--------------------ecceEEEEe-CCCchHHHHHHHHHcCccEEEEecCC
Q 037201 106 GFADELKRAWFCVRNV--------------------RFGCLMVVS-DDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V--------------------~v~clvLVS-Ddsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
|+..+++..|+.+..+ ++|.||+.+ |.+.+.+.++.+.+.|+..|+++...
T Consensus 25 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 96 (305)
T 3g1w_A 25 GFEDAAQALNVTVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAIDPVELTDTINKAVDAGIPIVLFDSGA 96 (305)
T ss_dssp HHHHHHHHHTCEEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHHHcCCEEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEECCCC
Confidence 5566777778877763 789988876 44557889999999999999998653
No 252
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=78.55 E-value=0.41 Score=31.45 Aligned_cols=22 Identities=14% Similarity=0.072 Sum_probs=12.2
Q ss_pred hhhhhh--cCCCcCChhHHHHHHH
Q 037201 46 NCLLIR--NQGRFYNNDKLVNHFR 67 (177)
Q Consensus 46 ~~Lc~~--CGrrf~t~~~L~kHFk 67 (177)
.+.|.. ||+.|.+...|.+|.+
T Consensus 15 ~~~C~~~~C~~~f~~~~~l~~H~~ 38 (100)
T 2ebt_A 15 IHYCDYPGCTKVYTKSSHLKAHLR 38 (100)
T ss_dssp CEECCSSSCCCEESCHHHHHHHHH
T ss_pred ceEcCCCCCCCcccCHHHHHHHHH
Confidence 344554 6666666666665554
No 253
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=78.54 E-value=2.5 Score=35.79 Aligned_cols=47 Identities=15% Similarity=0.163 Sum_probs=38.6
Q ss_pred cceEEEEeCC---CchHHHHHHHHHcCccEEEEecCCchhhhhhhccccc
Q 037201 123 FGCLMVVSDD---SNFVEVFQEATLRCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 123 v~clvLVSDd---sdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
-|.+|.+|-. .|-.+.++.|+++|.+||.|-+..++.|.+.||..+.
T Consensus 91 ~dl~i~iS~SG~T~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~ 140 (334)
T 3hba_A 91 GGLVIVISQSGRSPDILAQARMAKNAGAFCVALVNDETAPIKDIVDVVIP 140 (334)
T ss_dssp TCEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSGGGGTSSEEEE
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHcCCcEEEEeCCCCChHHHhcCEeee
Confidence 4567777765 4566788889999999999999888899999998764
No 254
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=78.48 E-value=0.42 Score=30.07 Aligned_cols=24 Identities=25% Similarity=0.279 Sum_probs=19.5
Q ss_pred hhhhhhhh--cCCCcCChhHHHHHHH
Q 037201 44 KENCLLIR--NQGRFYNNDKLVNHFR 67 (177)
Q Consensus 44 er~~Lc~~--CGrrf~t~~~L~kHFk 67 (177)
++.+-|.+ ||+.|.+...|.+|.+
T Consensus 45 ~~~~~C~~~~C~k~f~~~~~l~~H~~ 70 (72)
T 2epa_A 45 EKPFSCSWKGCERRFARSDELSRHRR 70 (72)
T ss_dssp SCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred CCCccCCCCCCCcccCCHHHHHhHhh
Confidence 34566965 9999999999999964
No 255
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=78.44 E-value=0.25 Score=31.19 Aligned_cols=27 Identities=4% Similarity=-0.121 Sum_probs=20.3
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQ 74 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr 74 (177)
++.+.|..||..|.+...|. .+|..|+
T Consensus 12 ~k~~~C~~C~k~F~~~~~l~----~~H~~~k 38 (62)
T 1vd4_A 12 RASFKCPVCSSTFTDLEANQ----LFDPMTG 38 (62)
T ss_dssp SSEEECSSSCCEEEHHHHHH----HEETTTT
T ss_pred CCCccCCCCCchhccHHHhH----hhcCCCC
Confidence 35577999999999888775 6776553
No 256
>3fkj_A Putative phosphosugar isomerases; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.12A {Salmonella typhimurium LT2}
Probab=78.19 E-value=2.2 Score=36.32 Aligned_cols=46 Identities=11% Similarity=0.066 Sum_probs=37.9
Q ss_pred cceEEEEeCC---CchHHHHHHHHHcCccEEEEecCCchhhhhhhcccc
Q 037201 123 FGCLMVVSDD---SNFVEVFQEATLRCLKMVVVGDMSDGALKRIANAFF 168 (177)
Q Consensus 123 v~clvLVSDd---sdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~ 168 (177)
-|.+|.+|-. .|-.++++.|+++|.+||.|-+..++.|.+.||.-+
T Consensus 90 ~dlvI~iS~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l 138 (347)
T 3fkj_A 90 NSVVILASQQGNTAETVAAARVAREKGAATIGLVYQPDTPLCEYSDYII 138 (347)
T ss_dssp TEEEEEEESSSCCHHHHHHHHHHHHHTCEEEEEESSTTCHHHHTCSEEE
T ss_pred CCEEEEEeCCCCcHHHHHHHHHHHHCCCcEEEEeCCCCChHHhhcCeEE
Confidence 3567777754 456677888999999999999988899999999865
No 257
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=77.43 E-value=2 Score=32.53 Aligned_cols=51 Identities=12% Similarity=0.087 Sum_probs=35.1
Q ss_pred CchHHhhhhcEEEEEe-------------------ecceEEEEeCCCchHHHHHHHHHcCccEEEEecCC
Q 037201 106 GFADELKRAWFCVRNV-------------------RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V-------------------~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
|+..++++.|+.+... ++|.||+.+.++.-.+.++.+.+.|+..|+++...
T Consensus 23 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 92 (272)
T 3o74_A 23 QLEQGARARGYQLLIASSDDQPDSERQLQQLFRARRCDALFVASCLPPEDDSYRELQDKGLPVIAIDRRL 92 (272)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCCCSSCCHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEecCccccHHHHHHHHHcCCCEEEEccCC
Confidence 4455666667666555 67888877666444667778888888888887653
No 258
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=77.37 E-value=3.4 Score=33.12 Aligned_cols=35 Identities=14% Similarity=0.193 Sum_probs=30.6
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecCC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
++|.||+++|+....++++.+.+.|+..|+++...
T Consensus 62 ~vDgiIi~~~~~~~~~~~~~~~~~giPvV~~~~~~ 96 (350)
T 3h75_A 62 KPDYLMLVNEQYVAPQILRLSQGSGIKLFIVNSPL 96 (350)
T ss_dssp CCSEEEEECCSSHHHHHHHHHTTSCCEEEEEESCC
T ss_pred CCCEEEEeCchhhHHHHHHHHHhCCCcEEEEcCCC
Confidence 57889999877778899999999999999998764
No 259
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=76.66 E-value=3.5 Score=31.62 Aligned_cols=51 Identities=8% Similarity=0.018 Sum_probs=39.9
Q ss_pred CchHHhhhhcEEEEEe-------------------ecceEEEEeCC-CchHHHHHHHHHcCccEEEEecCC
Q 037201 106 GFADELKRAWFCVRNV-------------------RFGCLMVVSDD-SNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V-------------------~v~clvLVSDd-sdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
|+..++++.|+.+... ++|.||+.+-+ +...+.++.+.+.|+..|+++...
T Consensus 26 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 96 (291)
T 3l49_A 26 AQIAEIERLGGTAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLGNLDVLNPWLQKINDAGIPLFTVDTAT 96 (291)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESSCHHHHHHHHHHHHHTTCCEEEESCCC
T ss_pred HHHHHHHHcCCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCcEEEecCCC
Confidence 5566777778777666 78999888766 456788999999999999997654
No 260
>1moq_A Glucosamine 6-phosphate synthase; glutamine amidotransferase; HET: GLP MES; 1.57A {Escherichia coli} SCOP: c.80.1.1 PDB: 1mor_A* 1mos_A*
Probab=75.98 E-value=2.5 Score=35.79 Aligned_cols=47 Identities=9% Similarity=0.116 Sum_probs=37.6
Q ss_pred cceEEEEeCC---CchHHHHHHHHHcC-ccEEEEecCCchhhhhhhccccc
Q 037201 123 FGCLMVVSDD---SNFVEVFQEATLRC-LKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 123 v~clvLVSDd---sdf~~~lr~Ar~r~-l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
-|.+|.+|=. .+-.++++.|+++| .++|.|-+..++.|.+.||.-+.
T Consensus 100 ~dlvI~iS~SG~T~e~l~a~~~ak~~G~a~viaIT~~~~S~La~~ad~~l~ 150 (368)
T 1moq_A 100 NSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALM 150 (368)
T ss_dssp TEEEEEEESSSCCHHHHHHHHHHTTTTCSEEEEEESSTTCHHHHHSSEEEE
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHcCCCeEEEEECCCCChHHHhCCEEEE
Confidence 4567777754 45667788888999 99999999878899999997653
No 261
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=75.93 E-value=2.9 Score=35.39 Aligned_cols=48 Identities=13% Similarity=0.108 Sum_probs=38.4
Q ss_pred ecceEEEEeCC---CchHHHHHHHHHcCccEEEEecCCchhhhhhhccccc
Q 037201 122 RFGCLMVVSDD---SNFVEVFQEATLRCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 122 ~v~clvLVSDd---sdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
.-|.+|.+|=. .|-...++.|+++|.+||.|-+..++.|.+.||.-+.
T Consensus 91 ~~dlvI~iS~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l~ 141 (344)
T 3fj1_A 91 DRALCLAVSQSGKSPDIVAMTRNAGRDGALCVALTNDAASPLAGVSAHTID 141 (344)
T ss_dssp TTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHHTSSEEEE
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHCCCcEEEEECCCCChHHHhcCEeee
Confidence 34557777754 4667788899999999999998878899999998764
No 262
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=75.84 E-value=4 Score=31.95 Aligned_cols=51 Identities=16% Similarity=0.132 Sum_probs=39.7
Q ss_pred CchHHhhhhcEEEEEe-------------------ecceEEEEeCCC-chHHHHHHHHHcCccEEEEecCC
Q 037201 106 GFADELKRAWFCVRNV-------------------RFGCLMVVSDDS-NFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V-------------------~v~clvLVSDds-df~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
|+..+++..|+.+... ++|.||+.+-++ .+.+.++.+.+.|+..|+++...
T Consensus 23 gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 93 (313)
T 3m9w_A 23 IFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 93 (313)
T ss_dssp HHHHHHHHTSCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSSTTSCHHHHHHHHTTTCEEEEESSCC
T ss_pred HHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCeEEEECCcC
Confidence 5667777778777665 788888876554 56789999999999999998654
No 263
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=74.98 E-value=4.5 Score=30.53 Aligned_cols=51 Identities=12% Similarity=0.136 Sum_probs=38.4
Q ss_pred CchHHhhhhcEEEEEe---------------------e-cceEEEEeCC-CchHHHHHHHHHcCccEEEEecCC
Q 037201 106 GFADELKRAWFCVRNV---------------------R-FGCLMVVSDD-SNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V---------------------~-v~clvLVSDd-sdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
|+..++++.|+.+... + +|.||+.+-+ ....+.++.+.+.++..|+++...
T Consensus 21 gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~~vdgii~~~~~~~~~~~~~~~~~~~~ipvV~~~~~~ 94 (276)
T 3ksm_A 21 GAQKAADEAGVTLLHRSTKDDGDIAGQIQILSYHLSQAPPDALILAPNSAEDLTPSVAQYRARNIPVLVVDSDL 94 (276)
T ss_dssp HHHHHHHHHTCEEEECCCSSTTCHHHHHHHHHHHHHHSCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHHHcCCEEEEECCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHHHHCCCcEEEEecCC
Confidence 4455666667666554 6 8999988744 567889999999999999998653
No 264
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=74.62 E-value=4.6 Score=31.01 Aligned_cols=34 Identities=9% Similarity=0.114 Sum_probs=26.6
Q ss_pred ecceEEEEeCC-CchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDD-SNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDd-sdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|-|++.+-+ +...+.++.+++.++..|+++..
T Consensus 57 ~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~i~~~ 91 (271)
T 2dri_A 57 GTKILLINPTDSDAVGNAVKMANQANIPVITLDRQ 91 (271)
T ss_dssp TEEEEEECCSSTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCcEEEecCC
Confidence 78888887644 44567889999999999999764
No 265
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=74.42 E-value=4.9 Score=30.70 Aligned_cols=51 Identities=10% Similarity=0.133 Sum_probs=38.6
Q ss_pred CchHHhhhhcEEEEEe-------------------ecceEEEEeCCC----chHHHHHHHHHcCccEEEEecCC
Q 037201 106 GFADELKRAWFCVRNV-------------------RFGCLMVVSDDS----NFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V-------------------~v~clvLVSDds----df~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
|+..++++.|+.+... ++|.||+.+-++ .-.+.++.+++.++..|+++...
T Consensus 36 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 109 (298)
T 3tb6_A 36 GIESYLSEQGYSMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTKSALQTPNIGYYLNLEKNGIPFAMINASY 109 (298)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEECCSSTTSCCTTHHHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHHCCCCEEEEecccccccCCcHHHHHHHHhcCCCEEEEecCc
Confidence 5667777778777666 788888877554 34578888999999999998653
No 266
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=74.12 E-value=4.8 Score=30.92 Aligned_cols=34 Identities=9% Similarity=0.146 Sum_probs=27.2
Q ss_pred ecceEEEEeCC-CchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDD-SNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDd-sdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|.|++.+.+ +++.++++.+.+.++..|+++..
T Consensus 58 ~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 92 (290)
T 2fn9_A 58 GYDAIIFNPTDADGSIANVKRAKEAGIPVFCVDRG 92 (290)
T ss_dssp TCSEEEECCSCTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred CCCEEEEecCChHHHHHHHHHHHHCCCeEEEEecC
Confidence 78888887654 44668899999999999999764
No 267
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=73.83 E-value=4.9 Score=31.06 Aligned_cols=34 Identities=15% Similarity=0.322 Sum_probs=26.4
Q ss_pred ecceEEEEeCC-CchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDD-SNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDd-sdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|-||+.+-+ ++..+.++.+.+.++..|+++..
T Consensus 57 ~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 91 (283)
T 2ioy_A 57 KVDVLLINPVDSDAVVTAIKEANSKNIPVITIDRS 91 (283)
T ss_dssp TCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred CCCEEEEeCCchhhhHHHHHHHHHCCCeEEEecCC
Confidence 78888887644 44567888899999999998754
No 268
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=72.31 E-value=1.2 Score=32.82 Aligned_cols=24 Identities=29% Similarity=0.321 Sum_probs=11.9
Q ss_pred hhhcCCCcCChhHHHHHHHhhhhhh
Q 037201 49 LIRNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 49 c~~CGrrf~t~~~L~kHFkqlHerE 73 (177)
|..||..|.+...|.+|.+ .|..|
T Consensus 164 C~~C~~~f~~~~~L~~H~~-~H~~~ 187 (190)
T 2i13_A 164 CPECGKSFSRRDALNVHQR-THTGK 187 (190)
T ss_dssp CTTTCCEESSHHHHHHHHT-TC---
T ss_pred CCCCCCccCCHHHHHHHHH-hcCCC
Confidence 5556666666666666643 34433
No 269
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=72.24 E-value=5.3 Score=31.33 Aligned_cols=51 Identities=16% Similarity=0.244 Sum_probs=40.9
Q ss_pred CchHHhhhhcEEEEEe-------------------ecceEEEEeCCC-chHHHHHHHHHcCccEEEEecCC
Q 037201 106 GFADELKRAWFCVRNV-------------------RFGCLMVVSDDS-NFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V-------------------~v~clvLVSDds-df~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
|+..+++..|+.+... ++|-||+.+-++ ...+.++.+.+.|+..|+++...
T Consensus 24 gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~vdgiIi~~~~~~~~~~~~~~~~~~giPvV~~~~~~ 94 (330)
T 3uug_A 24 NIVKQLQEAGYKTDLQYADDDIPNQLSQIENMVTKGVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYDRLI 94 (330)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSGGGGHHHHHHHHHTTCEEEEESSCC
T ss_pred HHHHHHHHcCCEEEEeeCCCCHHHHHHHHHHHHHcCCCEEEEEcCCchhHHHHHHHHHHCCCCEEEECCCC
Confidence 5567777778877665 889999887665 57889999999999999998654
No 270
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=71.95 E-value=0.89 Score=29.13 Aligned_cols=24 Identities=25% Similarity=0.375 Sum_probs=16.0
Q ss_pred hhh--hcCCCcCChhHHHHHHHhhhhh
Q 037201 48 LLI--RNQGRFYNNDKLVNHFRQIHEG 72 (177)
Q Consensus 48 Lc~--~CGrrf~t~~~L~kHFkqlHer 72 (177)
.|. .||..|.+...|..|. ++|..
T Consensus 37 ~C~~~~C~~~f~~~~~l~~H~-~~h~~ 62 (89)
T 2wbs_A 37 HCDWDGCGWKFARSDELTRHY-RKHTG 62 (89)
T ss_dssp ECCSTTTCCEESSHHHHHHHH-HHHHC
T ss_pred CCCCCCCCCccCCHHHHHHHH-HHcCC
Confidence 375 5777777777777776 34543
No 271
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=71.91 E-value=1.1 Score=33.08 Aligned_cols=26 Identities=19% Similarity=0.170 Sum_probs=19.8
Q ss_pred hhhhhhh--cCCCcCChhHHHHHHHhhhh
Q 037201 45 ENCLLIR--NQGRFYNNDKLVNHFRQIHE 71 (177)
Q Consensus 45 r~~Lc~~--CGrrf~t~~~L~kHFkqlHe 71 (177)
+.+.|.. ||..|.+...|.+|.+ +|.
T Consensus 133 ~~~~C~~~~C~k~F~~~~~L~~H~~-~H~ 160 (190)
T 1tf6_A 133 LPYECPHEGCDKRFSLPSRLKRHEK-VHA 160 (190)
T ss_dssp CSSBCCSSSCCCBCSSHHHHHHHHT-SSC
T ss_pred CCccCCCCCCCchhcCHHHHHHHHH-HhC
Confidence 4456877 8888888888888875 454
No 272
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=71.23 E-value=8.3 Score=29.74 Aligned_cols=49 Identities=16% Similarity=0.082 Sum_probs=38.4
Q ss_pred CchHHhhhhcEEEEEe------------------ecceEEEEeCCCc-hHHHHHHHHHcCccEEEEec
Q 037201 106 GFADELKRAWFCVRNV------------------RFGCLMVVSDDSN-FVEVFQEATLRCLKMVVVGD 154 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V------------------~v~clvLVSDdsd-f~~~lr~Ar~r~l~TVVVGd 154 (177)
|+..+++..|+.+... ++|-||+.+-+++ ..+.++.+.+.|+..|+++.
T Consensus 23 gi~~~a~~~g~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~ 90 (306)
T 8abp_A 23 FADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVDD 90 (306)
T ss_dssp HHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHTTCCEEEEECSCGGGHHHHHHHHHHTTCEEEEESS
T ss_pred HHHHHHHHcCCEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeCCCchhhHHHHHHHHHCCCcEEEeCC
Confidence 4566777778777654 8899999876654 56679999999999999983
No 273
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=70.55 E-value=6.5 Score=31.29 Aligned_cols=51 Identities=10% Similarity=-0.055 Sum_probs=38.1
Q ss_pred CchHHhhhhcEEEEEe-------------------ecceEEEEeCCCchHHHHHHHHHcCccEEEEecCC
Q 037201 106 GFADELKRAWFCVRNV-------------------RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V-------------------~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
|+..+++..|+.+... ++|.||+.+.+.+-..+.+.+.+.++..|+++...
T Consensus 84 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 153 (338)
T 3dbi_A 84 HAARMAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRL 153 (338)
T ss_dssp HHHHHHHHTTCEEEEEECTTSHHHHHHHHHHHHHTTCSEEEECCSSSCHHHHHHHHHHCSSCEEEESSCC
T ss_pred HHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCCCChHHHHHHHHcCCCCEEEEcCCC
Confidence 4566677777766554 78889988877666678888888888888887643
No 274
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=70.25 E-value=1.1 Score=33.09 Aligned_cols=27 Identities=22% Similarity=0.341 Sum_probs=20.7
Q ss_pred hhhhhh--hcCCCcCChhHHHHHHHhhhh
Q 037201 45 ENCLLI--RNQGRFYNNDKLVNHFRQIHE 71 (177)
Q Consensus 45 r~~Lc~--~CGrrf~t~~~L~kHFkqlHe 71 (177)
+.+.|. .||..|.+...|.+|.+..|.
T Consensus 71 ~~~~C~~~~C~~~f~~~~~l~~H~~~~h~ 99 (190)
T 1tf6_A 71 KNFTCDSDGCDLRFTTKANMKKHFNRFHN 99 (190)
T ss_dssp CCEECCSSSCCCEESCHHHHHHHHHTTSS
T ss_pred CceeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence 345587 788888888888888877773
No 275
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=70.12 E-value=6.3 Score=30.83 Aligned_cols=50 Identities=8% Similarity=0.098 Sum_probs=36.7
Q ss_pred CchHHhhhhcEEEEEe-------------------ecceEEEEeCCC-chHHHHHHHHHcCccEEEEecC
Q 037201 106 GFADELKRAWFCVRNV-------------------RFGCLMVVSDDS-NFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V-------------------~v~clvLVSDds-df~~~lr~Ar~r~l~TVVVGd~ 155 (177)
|+..+++..|+.+... ++|-||+.+.+. ...+.++.+.+.++..|+++..
T Consensus 23 gi~~~a~~~g~~l~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 92 (306)
T 2vk2_A 23 VAKSEAEKRGITLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRS 92 (306)
T ss_dssp HHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSSSSCHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhHHHHHHHHHHCCCCEEEecCC
Confidence 4455666667666544 788888877654 3568899999999999999764
No 276
>3tbf_A Glucosamine--fructose-6-phosphate aminotransferas [isomerizing]; structural genomics; 2.28A {Francisella tularensis subsp}
Probab=69.42 E-value=3.9 Score=35.05 Aligned_cols=48 Identities=10% Similarity=0.222 Sum_probs=38.8
Q ss_pred ecceEEEEeCC---CchHHHHHHHHHcC-ccEEEEecCCchhhhhhhccccc
Q 037201 122 RFGCLMVVSDD---SNFVEVFQEATLRC-LKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 122 ~v~clvLVSDd---sdf~~~lr~Ar~r~-l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
.-|.+|.+|-. .|-.++++.|+++| .+||.|-+..++.|.+.||.-+.
T Consensus 101 ~~dlvI~iS~SG~T~e~l~al~~ak~~G~a~~iaIT~~~~S~La~~aD~~l~ 152 (372)
T 3tbf_A 101 DGSLFVSISQSGETADTLESLRKSKKQNYVGSMCICNVPNSSLVRESDIAFM 152 (372)
T ss_dssp TTEEEEEEESSSCCHHHHHHHHHHTTTTEEEEEEEESSSSSHHHHHSSEEEE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHcCCceEEEEcCCCCChHHHhCCEeee
Confidence 34667778764 45667788888999 99999999888999999998764
No 277
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=69.23 E-value=9.1 Score=30.86 Aligned_cols=50 Identities=10% Similarity=0.092 Sum_probs=37.8
Q ss_pred CchHHhhhhcEEEEEe-------------------ecceEEEEeCCCchHHHHHHHHHcCccEEEEecCC
Q 037201 106 GFADELKRAWFCVRNV-------------------RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V-------------------~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
|+..++++.|+.+... ++|-||+.+.+.+ .+.++.+.+.++-.|+|++..
T Consensus 91 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~~~~~-~~~~~~l~~~~iPvV~i~~~~ 159 (355)
T 3e3m_A 91 SLTDVLEQGGLQLLLGYTAYSPEREEQLVETMLRRRPEAMVLSYDGHT-EQTIRLLQRASIPIVEIWEKP 159 (355)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEEECSCCC-HHHHHHHHHCCSCEEEESSCC
T ss_pred HHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCCCC-HHHHHHHHhCCCCEEEECCcc
Confidence 5567777778777654 7888888876544 367888889999999997753
No 278
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=68.99 E-value=7 Score=31.29 Aligned_cols=50 Identities=10% Similarity=0.009 Sum_probs=36.0
Q ss_pred CchHHhhhhcEEEEEe-------------------ecceEEEEeCCCchHHHHHHHHHcCccEEEEecCC
Q 037201 106 GFADELKRAWFCVRNV-------------------RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V-------------------~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
|+..++++.|+.+... ++|.||+.+-+.+ .+.++.+.+.++..|++||..
T Consensus 89 gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdGiIi~~~~~~-~~~~~~l~~~~iPvV~i~~~~ 157 (344)
T 3kjx_A 89 GINQVLEDTELQPVVGVTDYLPEKEEKVLYEMLSWRPSGVIIAGLEHS-EAARAMLDAAGIPVVEIMDSD 157 (344)
T ss_dssp HHHHHHTSSSSEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSCCC-HHHHHHHHHCSSCEEEEEECS
T ss_pred HHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEECCCCC-HHHHHHHHhCCCCEEEEeCCC
Confidence 4556666667666543 7888888865443 267888889999999998753
No 279
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=67.66 E-value=5.4 Score=31.18 Aligned_cols=33 Identities=6% Similarity=0.030 Sum_probs=21.5
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|.||+++-+.+ .+.++.+.+.++..|+|+..
T Consensus 83 ~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~i~~~ 115 (305)
T 3huu_A 83 SVDGFILLYSLKD-DPIEHLLNEFKVPYLIVGKS 115 (305)
T ss_dssp CCSEEEESSCBTT-CHHHHHHHHTTCCEEEESCC
T ss_pred CCCEEEEeCCcCC-cHHHHHHHHcCCCEEEECCC
Confidence 6777777653322 26677777778887777754
No 280
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=67.49 E-value=5.7 Score=30.45 Aligned_cols=49 Identities=12% Similarity=0.222 Sum_probs=33.5
Q ss_pred CchHHhhhhcEEEEEe-------------------ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 106 GFADELKRAWFCVRNV-------------------RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V-------------------~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
|+..++++.|+.+... ++|-||+++-+.+ .+.++.+.+.++..|+++..
T Consensus 34 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~~~~~ 101 (292)
T 3k4h_A 34 GISSFAHVEGYALYMSTGETEEEIFNGVVKMVQGRQIGGIILLYSREN-DRIIQYLHEQNFPFVLIGKP 101 (292)
T ss_dssp HHHHHHHHTTCEEEECCCCSHHHHHHHHHHHHHTTCCCEEEESCCBTT-CHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCC-hHHHHHHHHCCCCEEEECCC
Confidence 4566666777766555 7788777654332 36778888888888888764
No 281
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=67.34 E-value=7.6 Score=30.26 Aligned_cols=49 Identities=14% Similarity=0.096 Sum_probs=34.2
Q ss_pred CchHHhhhhcEEEEEe------------------ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 106 GFADELKRAWFCVRNV------------------RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V------------------~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
|+..++++.|+.+... ++|.||+.+-+.+- +.++.+.+.++..|+++..
T Consensus 31 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~-~~~~~l~~~~iPvV~~~~~ 97 (294)
T 3qk7_A 31 WIGIELGKRGLDLLLIPDEPGEKYQSLIHLVETRRVDALIVAHTQPED-FRLQYLQKQNFPFLALGRS 97 (294)
T ss_dssp HHHHHHHHTTCEEEEEEECTTCCCHHHHHHHHHTCCSEEEECSCCSSC-HHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHCCCEEEEEeCCChhhHHHHHHHHHcCCCCEEEEeCCCCCh-HHHHHHHhCCCCEEEECCC
Confidence 4556666667666554 68888887655432 6778888888888888764
No 282
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=66.68 E-value=8.8 Score=29.79 Aligned_cols=33 Identities=9% Similarity=0.136 Sum_probs=23.3
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|.||+.+-+.+ .+.++.+.+.++..|+++..
T Consensus 72 ~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~~~~~ 104 (289)
T 2fep_A 72 QVDGIVFMGGNIT-DEHVAEFKRSPVPIVLAASV 104 (289)
T ss_dssp TCSEEEECCSCCC-HHHHHHHHHSSSCEEEESCC
T ss_pred CCCEEEEecCCCC-HHHHHHHHhcCCCEEEEccc
Confidence 7788887764433 46677777788888888754
No 283
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=66.13 E-value=6.8 Score=29.71 Aligned_cols=33 Identities=6% Similarity=0.122 Sum_probs=21.0
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|.|++.+.+.+ .++++.+.+.++..|+++..
T Consensus 59 ~vdgii~~~~~~~-~~~~~~l~~~~iPvV~~~~~ 91 (275)
T 3d8u_A 59 RPAGVVLFGSEHS-QRTHQLLEASNTPVLEIAEL 91 (275)
T ss_dssp CCCCEEEESSCCC-HHHHHHHHHHTCCEEEESSS
T ss_pred CCCEEEEeCCCCC-HHHHHHHHhCCCCEEEEeec
Confidence 5677776654433 35666676777777777653
No 284
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=66.11 E-value=3.5 Score=31.83 Aligned_cols=50 Identities=14% Similarity=0.214 Sum_probs=32.5
Q ss_pred CchHHhhhhcEEEEEe-------------------ecceEEEEeCCCchHHHHHHHHHcCccEEEEecCC
Q 037201 106 GFADELKRAWFCVRNV-------------------RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V-------------------~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
|+..++++.|+.+... ++|.||+.+-+. ..++++.+.+.++..|+++...
T Consensus 29 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~-~~~~~~~~~~~~iPvV~~~~~~ 97 (291)
T 3egc_A 29 GVESEARHKGYSVLLANTAEDIVREREAVGQFFERRVDGLILAPSEG-EHDYLRTELPKTFPIVAVNREL 97 (291)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCSS-CCHHHHHSSCTTSCEEEESSCC
T ss_pred HHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEeCCCC-ChHHHHHhhccCCCEEEEeccc
Confidence 4455666667666555 677777766554 4566777777777777776643
No 285
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=65.79 E-value=5.5 Score=31.94 Aligned_cols=34 Identities=9% Similarity=0.044 Sum_probs=28.8
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccE--EEEecC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKM--VVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~T--VVVGd~ 155 (177)
+.|.|++.++..+...+++.+++.|+.. +++|+.
T Consensus 195 ~~d~v~~~~~~~~~~~~~~~~~~~g~~~~~~i~g~~ 230 (375)
T 3i09_A 195 KAQILGLANAGGDTVNAIKAAKEFGITKTMKLAALL 230 (375)
T ss_dssp CCSEEEEECCHHHHHHHHHHHHHTTGGGTCEEEESS
T ss_pred CCCEEEEecCchhHHHHHHHHHHcCCCcCceEEecc
Confidence 6788888888889999999999999876 578764
No 286
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=65.74 E-value=6.7 Score=30.59 Aligned_cols=50 Identities=10% Similarity=0.228 Sum_probs=34.5
Q ss_pred CchHHhhhhcEEEEEe-------------------ecceEEEEeCCCchHHHHHHHHHcCccEEEEecCC
Q 037201 106 GFADELKRAWFCVRNV-------------------RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V-------------------~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
|+..++++.|+.+... ++|.||+++.+.+ .++++.+.+.++..|+|+...
T Consensus 33 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~~~~~-~~~~~~l~~~~iPvV~i~~~~ 101 (295)
T 3hcw_A 33 GISETCNQHGYGTQTTVSNNMNDLMDEVYKMIKQRMVDAFILLYSKEN-DPIKQMLIDESMPFIVIGKPT 101 (295)
T ss_dssp HHHHHHHTTTCEEEECCCCSHHHHHHHHHHHHHTTCCSEEEESCCCTT-CHHHHHHHHTTCCEEEESCCC
T ss_pred HHHHHHHHCCCEEEEEcCCCChHHHHHHHHHHHhCCcCEEEEcCcccC-hHHHHHHHhCCCCEEEECCCC
Confidence 4556666667666544 7888888754432 367788888899999888653
No 287
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=65.56 E-value=4.5 Score=32.04 Aligned_cols=33 Identities=9% Similarity=0.067 Sum_probs=28.3
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEec
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGD 154 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd 154 (177)
+.|.|++.+|..+...+++.+++.|++.-++|-
T Consensus 194 ~~d~i~~~~~~~~a~~~~~~~~~~g~~~p~~~~ 226 (358)
T 3hut_A 194 APQAIYLAMAYEDAAPFLRALRARGSALPVYGS 226 (358)
T ss_dssp CCSEEEEESCHHHHHHHHHHHHHTTCCCCEEEC
T ss_pred CCCEEEEccCchHHHHHHHHHHHcCCCCcEEec
Confidence 678888888887999999999999998777764
No 288
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=65.11 E-value=3.5 Score=30.71 Aligned_cols=50 Identities=20% Similarity=0.106 Sum_probs=35.0
Q ss_pred CCCchHHhhhhcEEEEEe---------------------ecceEEEEeCCCchHHHHHHHHHcCccEEEEe
Q 037201 104 GYGFADELKRAWFCVRNV---------------------RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVG 153 (177)
Q Consensus 104 gygLa~eLrRAGv~Vr~V---------------------~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVG 153 (177)
|+.++..|.++|+.|-.| .+|.+++.--+..-.++++.+-++|++.+++-
T Consensus 30 G~~~~~~L~~~G~~V~~vnp~~~~i~G~~~~~s~~el~~~vDlvii~vp~~~v~~v~~~~~~~g~~~i~~~ 100 (138)
T 1y81_A 30 GNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVPPKVGLQVAKEAVEAGFKKLWFQ 100 (138)
T ss_dssp HHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEECSCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHCCCEEEEeCCCCCeECCeeecCCHHHhCCCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEc
Confidence 455666677777755444 57776666566777788888888888887763
No 289
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=64.13 E-value=11 Score=30.18 Aligned_cols=50 Identities=14% Similarity=0.079 Sum_probs=35.9
Q ss_pred CchHHhhhhcEEEEEe-------------------ecceEEEEeCCCchHHHHHHHHHcCccEEEEecCC
Q 037201 106 GFADELKRAWFCVRNV-------------------RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V-------------------~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
|+..++.+.|+.+... ++|.||+.+-+.+- ++++.+.+.++..|++++..
T Consensus 83 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~-~~~~~l~~~~iPvV~~~~~~ 151 (339)
T 3h5o_A 83 GIETVLDAAGYQMLIGNSHYDAGQELQLLRAYLQHRPDGVLITGLSHAE-PFERILSQHALPVVYMMDLA 151 (339)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSCCCT-THHHHHHHTTCCEEEEESCC
T ss_pred HHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHcCCCCEEEEeCCCCCH-HHHHHHhcCCCCEEEEeecC
Confidence 5566677777776554 78888888644332 67778888899999997753
No 290
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=64.06 E-value=12 Score=27.67 Aligned_cols=61 Identities=8% Similarity=-0.007 Sum_probs=33.3
Q ss_pred chHHhhhhcEEEEEe---------------ecceEEEEeCCCchHHHHHHH-HHcC---ccEEEEecCC-chhhhhhhcc
Q 037201 107 FADELKRAWFCVRNV---------------RFGCLMVVSDDSNFVEVFQEA-TLRC---LKMVVVGDMS-DGALKRIANA 166 (177)
Q Consensus 107 La~eLrRAGv~Vr~V---------------~v~clvLVSDdsdf~~~lr~A-r~r~---l~TVVVGd~~-~~~L~r~Ad~ 166 (177)
+-.+|++.|+.+-.+ |++ +..+..+. .++++.+ .+.| -.+++|||+. |-...+.|++
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~--~~~~~~~k-~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~ 123 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP--VLHGIDRK-DLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGW 123 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC--EEESCSCH-HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe--eEeCCCCh-HHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCC
Confidence 345677777766555 566 33333333 4444444 3444 4588888853 3455666666
Q ss_pred ccch
Q 037201 167 FFSW 170 (177)
Q Consensus 167 ~~sW 170 (177)
.+-+
T Consensus 124 ~v~~ 127 (176)
T 3mmz_A 124 PVAV 127 (176)
T ss_dssp EEEC
T ss_pred eEEC
Confidence 5544
No 291
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=63.65 E-value=12 Score=29.58 Aligned_cols=32 Identities=16% Similarity=0.214 Sum_probs=26.4
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCcc---EEEEe
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLK---MVVVG 153 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~---TVVVG 153 (177)
+.|.|++.+.+.+...+++.+++.|+. ..++|
T Consensus 194 ~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~v~~~~ 228 (368)
T 4eyg_A 194 KPDAMFVFVPAGQGGNFMKQFAERGLDKSGIKVIG 228 (368)
T ss_dssp CCSEEEEECCTTCHHHHHHHHHHTTGGGTTCEEEE
T ss_pred CCCEEEEeccchHHHHHHHHHHHcCCCcCCceEEe
Confidence 678888877788999999999999998 34454
No 292
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=63.62 E-value=9.5 Score=29.51 Aligned_cols=49 Identities=14% Similarity=0.150 Sum_probs=33.9
Q ss_pred CchHHhhhhcEEEEEe-------------------ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 106 GFADELKRAWFCVRNV-------------------RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V-------------------~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
|+..++++.|+.+... ++|.||+++-+.+ .+.++.+.+.++..|+++..
T Consensus 31 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~i~~~ 98 (288)
T 3gv0_A 31 GITEVLSTTQYHLVVTPHIHAKDSMVPIRYILETGSADGVIISKIEPN-DPRVRFMTERNMPFVTHGRS 98 (288)
T ss_dssp HHHHHHTTSSCEEEECCBSSGGGTTHHHHHHHHHTCCSEEEEESCCTT-CHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHcCCEEEEecCCcchhHHHHHHHHHHcCCccEEEEecCCCC-cHHHHHHhhCCCCEEEECCc
Confidence 4556666667666554 7888887754322 36778888889998888865
No 293
>3c3j_A Putative tagatose-6-phosphate ketose/aldose isome; tagatose-6-phosphate ketose/aldose isomerase, structural GEN PSI, MCSG; 1.80A {Escherichia coli}
Probab=63.41 E-value=7.3 Score=33.22 Aligned_cols=56 Identities=16% Similarity=-0.071 Sum_probs=43.3
Q ss_pred Hhhh-hcEEEEEe----------------ecceEEEEeCC---CchHHHHHHHHHc--CccEEEEecCCchhhhhhhc
Q 037201 110 ELKR-AWFCVRNV----------------RFGCLMVVSDD---SNFVEVFQEATLR--CLKMVVVGDMSDGALKRIAN 165 (177)
Q Consensus 110 eLrR-AGv~Vr~V----------------~v~clvLVSDd---sdf~~~lr~Ar~r--~l~TVVVGd~~~~~L~r~Ad 165 (177)
-|.+ .|+.|..+ .-|.+|.+|=. .|-.++++.|+++ |.+||.|-+..++.|.+.||
T Consensus 74 ~l~~~~g~~v~~~~~~~~~~~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ak~~~~ga~~iaIT~~~~S~La~~ad 151 (384)
T 3c3j_A 74 WLASHTGKNFSAVPTTDLVTNPMDYLNPAHPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGALYQNAI 151 (384)
T ss_dssp HHHHHHCSEEEECCHHHHHHCHHHHCCTTSCEEEEEEESSSCCHHHHHHHHHHHHHCSSEEEEEEESCTTSHHHHHHH
T ss_pred HHHHHhCCcEEEeccHHHHhChhhhhCCCCCeEEEEEeCCcCCHHHHHHHHHHHhhCCCCCEEEEECCCCCHHHhhhc
Confidence 4555 68877764 11567777754 4567778888998 99999999988889999999
No 294
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=62.91 E-value=8.9 Score=29.64 Aligned_cols=33 Identities=15% Similarity=0.048 Sum_probs=21.7
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|.||+.+-+.+ .+.++.+.+.++..|+++..
T Consensus 64 ~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~~~~~ 96 (287)
T 3bbl_A 64 NVDGFVLSSINYN-DPRVQFLLKQKFPFVAFGRS 96 (287)
T ss_dssp CCSEEEECSCCTT-CHHHHHHHHTTCCEEEESCC
T ss_pred CCCEEEEeecCCC-cHHHHHHHhcCCCEEEECCc
Confidence 6777777654332 25677777778888877654
No 295
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A*
Probab=62.51 E-value=7.9 Score=35.23 Aligned_cols=46 Identities=9% Similarity=0.128 Sum_probs=37.5
Q ss_pred cceEEEEeCC---CchHHHHHHHHHcC-ccEEEEecCCchhhhhhhcccc
Q 037201 123 FGCLMVVSDD---SNFVEVFQEATLRC-LKMVVVGDMSDGALKRIANAFF 168 (177)
Q Consensus 123 v~clvLVSDd---sdf~~~lr~Ar~r~-l~TVVVGd~~~~~L~r~Ad~~~ 168 (177)
-|.+|.+|=. .+-..+++.|+++| .+||.|-+..++.|.+.||.-+
T Consensus 340 ~dlvI~iS~SG~T~e~l~a~~~ak~~G~a~~IaIT~~~~S~La~~ad~~l 389 (608)
T 2bpl_A 340 NSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLAL 389 (608)
T ss_dssp TEEEEEEESSSCCHHHHHHHHHHHHTTCSEEEEEESSTTCHHHHHSSEEE
T ss_pred CCEEEEEeCCcCCHHHHHHHHHHHHcCCCeEEEEECCCCCHHHHhcCEEE
Confidence 3567777753 46677888899999 9999999887889999999765
No 296
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=62.07 E-value=8.8 Score=29.37 Aligned_cols=35 Identities=3% Similarity=-0.093 Sum_probs=28.8
Q ss_pred ecceEEEEeCCC-chHHHHHHHHHcCccEEEEecCC
Q 037201 122 RFGCLMVVSDDS-NFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 122 ~v~clvLVSDds-df~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
++|-||+.+-++ ...+.++.+.+.++..|+++...
T Consensus 69 ~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 104 (304)
T 3gbv_A 69 QPDGVMFAPTVPQYTKGFTDALNELGIPYIYIDSQI 104 (304)
T ss_dssp CCSEEEECCSSGGGTHHHHHHHHHHTCCEEEESSCC
T ss_pred CCCEEEECCCChHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 788888887665 47888999999999999998653
No 297
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=61.10 E-value=9.1 Score=29.45 Aligned_cols=35 Identities=14% Similarity=0.072 Sum_probs=27.9
Q ss_pred ecceEEEEeCCCc-hHHHHHHHHHcCccEEEEecCC
Q 037201 122 RFGCLMVVSDDSN-FVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 122 ~v~clvLVSDdsd-f~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
++|.||+.+-+.+ ..++++.+.+.++..|+++...
T Consensus 59 ~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 94 (309)
T 2fvy_A 59 GVKALAINLVDPAAAGTVIEKARGQNVPVVFFNKEP 94 (309)
T ss_dssp TCSEEEECCSSGGGHHHHHHHHHTTTCCEEEESSCC
T ss_pred CCCEEEEeCCCcchhHHHHHHHHHCCCcEEEecCCC
Confidence 7888888775554 5688999999999999997653
No 298
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=60.83 E-value=16 Score=27.75 Aligned_cols=32 Identities=13% Similarity=0.203 Sum_probs=16.6
Q ss_pred ecceEEEEeCCCchHHHHHHHHH-cCccEEEEec
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATL-RCLKMVVVGD 154 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~-r~l~TVVVGd 154 (177)
++|-|++.+-+.+ .+.++.+.+ .++..|+++.
T Consensus 77 ~vdgii~~~~~~~-~~~~~~l~~~~~iPvV~~~~ 109 (296)
T 3brq_A 77 RCDAIMIYPRFLS-VDEIDDIIDAHSQPIMVLNR 109 (296)
T ss_dssp TCSEEEEECSSSC-HHHHHHHHHTCSSCEEEESC
T ss_pred CCCEEEEecCCCC-hHHHHHHHhcCCCCEEEEcc
Confidence 4555555543322 244555555 5666666654
No 299
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=60.79 E-value=7.3 Score=31.42 Aligned_cols=34 Identities=15% Similarity=0.156 Sum_probs=29.4
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
+.|.|++.+.+.+...+++.+++.|++.-++|..
T Consensus 198 ~~dav~~~~~~~~a~~~~~~~~~~g~~~~~~~~~ 231 (392)
T 3lkb_A 198 GVEYVVHQNVAGPVANILKDAKRLGLKMRHLGAH 231 (392)
T ss_dssp TCCEEEEESCHHHHHHHHHHHHHTTCCCEEEECG
T ss_pred CCCEEEEecCcchHHHHHHHHHHcCCCceEEEec
Confidence 6788888899999999999999999988777753
No 300
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=60.19 E-value=8.4 Score=30.48 Aligned_cols=33 Identities=12% Similarity=0.057 Sum_probs=28.0
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEec
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGD 154 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd 154 (177)
+.|.|++.+|+.+...+++.+++.|++.-++|-
T Consensus 214 ~~dav~~~~~~~~a~~~~~~~~~~g~~~~~~~~ 246 (386)
T 3sg0_A 214 KPDAVFIASAGTPAVLPQKALRERGFKGAIYQT 246 (386)
T ss_dssp CCSEEEEECCSGGGHHHHHHHHHTTCCSEEECC
T ss_pred CCCEEEEecCcchHHHHHHHHHHcCCCCcEEec
Confidence 678899999889999999999999998656653
No 301
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=60.04 E-value=14 Score=28.95 Aligned_cols=34 Identities=9% Similarity=0.166 Sum_probs=26.1
Q ss_pred ecceEEEEeCC-CchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDD-SNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDd-sdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|.||+.+-+ +.+.+.++.+.+.++..|+++..
T Consensus 57 ~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 91 (313)
T 2h3h_A 57 GVNGIAIAPSDPTAVIPTIKKALEMGIPVVTLDTD 91 (313)
T ss_dssp TCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCeEEEeCCC
Confidence 67888877644 44668888888899998888764
No 302
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=60.00 E-value=12 Score=29.61 Aligned_cols=34 Identities=12% Similarity=0.243 Sum_probs=27.4
Q ss_pred ecceEEEEeCCC-chHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDDS-NFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDds-df~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|.||+.+-|+ ...++++.|+++|+..|.++..
T Consensus 60 ~vdgiii~~~~~~~~~~~~~~a~~~gipvV~~d~~ 94 (316)
T 1tjy_A 60 GYDAIIVSAVSPDGLCPALKRAMQRGVKILTWDSD 94 (316)
T ss_dssp TCSEEEECCSSSSTTHHHHHHHHHTTCEEEEESSC
T ss_pred CCCEEEEeCCCHHHHHHHHHHHHHCcCEEEEecCC
Confidence 789988887655 4578999999999998888643
No 303
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=59.98 E-value=13 Score=28.77 Aligned_cols=35 Identities=14% Similarity=0.162 Sum_probs=28.1
Q ss_pred ecceEEEEe-CCCchHHHHHHHHHcCccEEEEecCC
Q 037201 122 RFGCLMVVS-DDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 122 ~v~clvLVS-Ddsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
++|.||+.+ |...+.+.++.+++.|+..|.++...
T Consensus 61 ~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~~~~ 96 (297)
T 3rot_A 61 YPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDTRP 96 (297)
T ss_dssp CCSEEEECCCCSSTTHHHHHHHHHHTCCEEEESCCC
T ss_pred CCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 788888765 44557889999999999999998654
No 304
>3odp_A Putative tagatose-6-phosphate ketose/aldose isome; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PG4; 2.35A {Clostridium novyi}
Probab=59.13 E-value=13 Score=32.35 Aligned_cols=42 Identities=14% Similarity=0.092 Sum_probs=34.6
Q ss_pred ceEEEEeCCC---chHHHHHHHHHc--CccEEEEecCCchhhhhhhc
Q 037201 124 GCLMVVSDDS---NFVEVFQEATLR--CLKMVVVGDMSDGALKRIAN 165 (177)
Q Consensus 124 ~clvLVSDds---df~~~lr~Ar~r--~l~TVVVGd~~~~~L~r~Ad 165 (177)
|.+|.+|-.= |-...++.|+++ |.+||.|-+..++.|.+.||
T Consensus 110 dlvI~iS~SGeT~e~l~al~~ak~~~~Ga~~iaIT~~~~S~La~~aD 156 (393)
T 3odp_A 110 TLLISCARSGNSPESTAAVTLAEKIVDDISHLIITCNSEGKLALHAK 156 (393)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHHCSSEEEEEEESCTTSHHHHGGG
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHhc
Confidence 5677888664 445556889998 99999999988889999999
No 305
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=58.77 E-value=9.4 Score=30.26 Aligned_cols=34 Identities=9% Similarity=0.168 Sum_probs=29.0
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
+.|.|++.+.|.+...+++.+++.|++.-++|.+
T Consensus 206 ~~dai~~~~~~~~a~~~~~~~~~~g~~vp~~~~~ 239 (375)
T 4evq_A 206 KPDCVYAFFSGGGALKFIKDYAAANLGIPLWGPG 239 (375)
T ss_dssp CCSEEEEECCTHHHHHHHHHHHHTTCCCCEEEEG
T ss_pred CCCEEEEecCcchHHHHHHHHHHcCCCceEEecC
Confidence 6788888788899999999999999987777753
No 306
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=58.69 E-value=11 Score=29.52 Aligned_cols=50 Identities=8% Similarity=-0.050 Sum_probs=33.5
Q ss_pred CchHHhhhhcEEEEEe-------------------ecceEEEEeCCCchHHHHHHHHHcCccEEEEecCC
Q 037201 106 GFADELKRAWFCVRNV-------------------RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V-------------------~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
|+..++++.|+.+... ++|.||+.+-+.+-.+.++.+.+ ++..|+|+...
T Consensus 36 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~l~~-~iPvV~i~~~~ 104 (303)
T 3kke_A 36 GVQMAASGHSTDVLLGQIDAPPRGTQQLSRLVSEGRVDGVLLQRREDFDDDMLAAVLE-GVPAVTINSRV 104 (303)
T ss_dssp HHHHHHHHTTCCEEEEECCSTTHHHHHHHHHHHSCSSSEEEECCCTTCCHHHHHHHHT-TSCEEEESCCC
T ss_pred HHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCcEEEEecCCCCcHHHHHHHhC-CCCEEEECCcC
Confidence 4556666677766554 78888887655442226777777 88888887653
No 307
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=58.34 E-value=8.8 Score=30.45 Aligned_cols=34 Identities=12% Similarity=-0.011 Sum_probs=26.9
Q ss_pred cceEEEEeCCCc-hHHHHHHHHHcCccEEEEecCC
Q 037201 123 FGCLMVVSDDSN-FVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 123 v~clvLVSDdsd-f~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
+|-||+.+-+.+ ..++++.+.+.++..|+++...
T Consensus 64 vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 98 (332)
T 2rjo_A 64 NLVLNVDPNDSADARVIVEACSKAGAYVTTIWNKP 98 (332)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHTCEEEEESCCC
T ss_pred CCEEEEeCCCHHHHHHHHHHHHHCCCeEEEECCCC
Confidence 899888775543 4578899999999999998653
No 308
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=58.28 E-value=15 Score=28.36 Aligned_cols=43 Identities=26% Similarity=0.321 Sum_probs=30.2
Q ss_pred hHHhhhhcEEEEEe-----------------ecceEEEEeCCCchHH-HHHHHHHcCccEE
Q 037201 108 ADELKRAWFCVRNV-----------------RFGCLMVVSDDSNFVE-VFQEATLRCLKMV 150 (177)
Q Consensus 108 a~eLrRAGv~Vr~V-----------------~v~clvLVSDdsdf~~-~lr~Ar~r~l~TV 150 (177)
-+.++..||.|+|| +...+|+|-||.++++ .+|+.+.-|.+..
T Consensus 19 kdiikkngfkvrtvrspqelkdsieelvkkynativvvvvddkewaekairfvkslgaqvl 79 (134)
T 2l69_A 19 KDIIKKNGFKVRTVRSPQELKDSIEELVKKYNATIVVVVVDDKEWAEKAIRFVKSLGAQVL 79 (134)
T ss_dssp HHHHHHTTCEEEEECSHHHHHHHHHHHTTCCCCEEEEEECSSHHHHHHHHHHHHHHCCCCE
T ss_pred HHHHHhcCceEEEecCHHHHHHHHHHHHHHhCCeEEEEEEccHHHHHHHHHHHHhcCCeEE
Confidence 46678899999999 4445677778877754 5666666665543
No 309
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=57.80 E-value=14 Score=29.26 Aligned_cols=34 Identities=6% Similarity=0.121 Sum_probs=26.7
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|.||+.+|.....+.++.+.+.++..|++.|.
T Consensus 104 ~vdgiIi~~~~~~~~~~~~~~~~~~ip~V~~~~~ 137 (342)
T 1jx6_A 104 KSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNI 137 (342)
T ss_dssp TCSEEEECCSSSTTHHHHHHHHHHCSCEEEEETC
T ss_pred CCCEEEEeCChHhHHHHHHHHHHcCCCEEEEecC
Confidence 6888888555444578899999999999999665
No 310
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=57.76 E-value=5 Score=29.95 Aligned_cols=32 Identities=19% Similarity=0.065 Sum_probs=25.2
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEe
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVG 153 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVG 153 (177)
.+|.+++.--+..-.++++.+-+.|++.|++-
T Consensus 70 ~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~ 101 (145)
T 2duw_A 70 KVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQ 101 (145)
T ss_dssp CCSEEECCSCSTHHHHHHHHHHHHTCCEEECC
T ss_pred CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEc
Confidence 67777666666777888988888999998874
No 311
>3q87_A Putative uncharacterized protein ECU08_1170; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=57.74 E-value=4.4 Score=31.32 Aligned_cols=10 Identities=0% Similarity=-0.576 Sum_probs=8.7
Q ss_pred hhhcCCCcCC
Q 037201 49 LIRNQGRFYN 58 (177)
Q Consensus 49 c~~CGrrf~t 58 (177)
|+.|||.|+=
T Consensus 102 Cp~cgr~ypI 111 (125)
T 3q87_A 102 CDMCGLIYPI 111 (125)
T ss_dssp ETTTCCEEEE
T ss_pred CCCCCCEeec
Confidence 9999999863
No 312
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=57.62 E-value=14 Score=28.20 Aligned_cols=49 Identities=10% Similarity=0.030 Sum_probs=33.4
Q ss_pred CchHHhhhhcEEEEEe------------ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 106 GFADELKRAWFCVRNV------------RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V------------~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
|+..++++.|+.+... ++|-||+.+-+.+ .+.++.+.+.++..|+++..
T Consensus 29 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~~~~~ 89 (277)
T 3cs3_A 29 GIKKGLALFDYEMIVCSGKKSHLFIPEKMVDGAIILDWTFP-TKEIEKFAERGHSIVVLDRT 89 (277)
T ss_dssp HHHHHHHTTTCEEEEEESTTTTTCCCTTTCSEEEEECTTSC-HHHHHHHHHTTCEEEESSSC
T ss_pred HHHHHHHHCCCeEEEEeCCCCHHHHhhccccEEEEecCCCC-HHHHHHHHhcCCCEEEEecC
Confidence 4455566666655443 6788888765544 36778888889998888754
No 313
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=57.21 E-value=3.1 Score=30.94 Aligned_cols=54 Identities=15% Similarity=0.038 Sum_probs=38.7
Q ss_pred CCCCCchHHhhhhcEEEEEe--------------------ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 102 KVGYGFADELKRAWFCVRNV--------------------RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 102 kvgygLa~eLrRAGv~Vr~V--------------------~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
|.||-+...|++.||.|-.| .+|.+++.--...-.++++++-++|++.|++.-+
T Consensus 18 ~~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~dlp~vDlavi~~p~~~v~~~v~e~~~~g~k~v~~~~G 91 (122)
T 3ff4_A 18 RYAYLAAERLKSHGHEFIPVGRKKGEVLGKTIINERPVIEGVDTVTLYINPQNQLSEYNYILSLKPKRVIFNPG 91 (122)
T ss_dssp SHHHHHHHHHHHHTCCEEEESSSCSEETTEECBCSCCCCTTCCEEEECSCHHHHGGGHHHHHHHCCSEEEECTT
T ss_pred CHHHHHHHHHHHCCCeEEEECCCCCcCCCeeccCChHHCCCCCEEEEEeCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 34677788888889877777 3565555555555567888888888888777543
No 314
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=57.07 E-value=4.8 Score=32.13 Aligned_cols=33 Identities=6% Similarity=0.054 Sum_probs=28.7
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEec
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGD 154 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd 154 (177)
+.|.|++.+++.+...+++.+++.|++.-+||-
T Consensus 196 ~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~i~~ 228 (364)
T 3lop_A 196 DVQAIFLGATAEPAAQFVRQYRARGGEAQLLGL 228 (364)
T ss_dssp CCSEEEEESCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred CCCEEEEecCcHHHHHHHHHHHHcCCCCeEEEe
Confidence 678888889899999999999999998777764
No 315
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=56.93 E-value=8.6 Score=30.93 Aligned_cols=34 Identities=15% Similarity=0.103 Sum_probs=27.3
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccE---EEEecC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKM---VVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~T---VVVGd~ 155 (177)
+.|.|++.++..+...+++.+++.|+.. ++.|+.
T Consensus 197 ~~d~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 233 (379)
T 3n0w_A 197 GAQLIVSTSGGAANINIMKQAREFGLPSKTQKVGGMI 233 (379)
T ss_dssp TCSEEEECCCHHHHHHHHHHHHHTTCSCSSCEEECCB
T ss_pred CCCEEEEecccchHHHHHHHHHHcCCCCCCcEEEecc
Confidence 6788888877788899999999999875 566664
No 316
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=56.44 E-value=4.1 Score=24.16 Aligned_cols=23 Identities=17% Similarity=0.033 Sum_probs=20.3
Q ss_pred hhhhhhcCCCcCChhHHHHHHHh
Q 037201 46 NCLLIRNQGRFYNNDKLVNHFRQ 68 (177)
Q Consensus 46 ~~Lc~~CGrrf~t~~~L~kHFkq 68 (177)
++-|++|.-..++..+|+.||..
T Consensus 3 k~~CpvCk~q~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 3 DFCCPKCQYQAPDMDTLQIHVME 25 (28)
T ss_dssp CEECTTSSCEESSHHHHHHHHHH
T ss_pred cccCccccccCcChHHHHHHHHH
Confidence 45699999999999999999963
No 317
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=56.38 E-value=14 Score=28.57 Aligned_cols=34 Identities=15% Similarity=0.147 Sum_probs=27.1
Q ss_pred ecceEEEEeCCC-chHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDDS-NFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDds-df~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|.|++.+-++ +..+.++.+.+.++..|+++..
T Consensus 59 ~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 93 (288)
T 1gud_A 59 NYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEK 93 (288)
T ss_dssp SEEEEEECCSSSSTTHHHHHHHHHTTCEEEEESSC
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCeEEEECCC
Confidence 688888876554 4567899999999999999764
No 318
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=56.24 E-value=14 Score=28.07 Aligned_cols=30 Identities=13% Similarity=0.141 Sum_probs=25.3
Q ss_pred CCCchHHHHHHHHHcCccEEEEe-----cCCchhh
Q 037201 131 DDSNFVEVFQEATLRCLKMVVVG-----DMSDGAL 160 (177)
Q Consensus 131 Ddsdf~~~lr~Ar~r~l~TVVVG-----d~~~~~L 160 (177)
.+.++..+.+..++.++..|||| |++.+..
T Consensus 38 ~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~ 72 (138)
T 1nu0_A 38 GTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPL 72 (138)
T ss_dssp TEECHHHHHHHHHHHCCSEEEEEEEECTTSCBCHH
T ss_pred cchHHHHHHHHHHHcCCCEEEEecccCCCcCcCHH
Confidence 36779999999999999999999 8776633
No 319
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=56.15 E-value=4.6 Score=25.42 Aligned_cols=26 Identities=15% Similarity=0.273 Sum_probs=22.9
Q ss_pred hhhhhcCCCcCChhHHHHHHHhhhhh
Q 037201 47 CLLIRNQGRFYNNDKLVNHFRQIHEG 72 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFkqlHer 72 (177)
+-|+.|-.++..-.+|++|.+.-|.-
T Consensus 10 qhcrfckkkysdvknlikhire~hd~ 35 (37)
T 2elu_A 10 QHCRFCKKKYSDVKNLIKHIRDAHDP 35 (37)
T ss_dssp CEETTTTEECSSHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 45999999999999999999988853
No 320
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=55.45 E-value=11 Score=29.51 Aligned_cols=32 Identities=6% Similarity=-0.051 Sum_probs=26.6
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEe
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVG 153 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVG 153 (177)
+.|.|++.+.|.+...+++.+++.|++.-+||
T Consensus 190 ~~dav~~~~~~~~a~~~~~~~~~~g~~~p~i~ 221 (362)
T 3snr_A 190 NPDAILVGASGTAAALPQTTLRERGYNGLIYQ 221 (362)
T ss_dssp CCSEEEEECCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEecCcchHHHHHHHHHHcCCCccEEe
Confidence 67888888888899999999999998754454
No 321
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=55.42 E-value=17 Score=28.14 Aligned_cols=49 Identities=12% Similarity=0.055 Sum_probs=34.1
Q ss_pred CchHHhhhhcEEEEEe------------------ecceEEEEeCCCchHHHHHHHHHcCccEEEEecCC
Q 037201 106 GFADELKRAWFCVRNV------------------RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V------------------~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
|+..++++.|+.+... ++|-||+.+-+.+- +.++.+.+ ++..|+++...
T Consensus 32 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-~~~~~~~~-~iPvV~i~~~~ 98 (289)
T 3k9c_A 32 QIYAAATRRGYDVMLSAVAPSRAEKVAVQALMRERCEAAILLGTRFDT-DELGALAD-RVPALVVARAS 98 (289)
T ss_dssp HHHHHHHHTTCEEEEEEEBTTBCHHHHHHHHTTTTEEEEEEETCCCCH-HHHHHHHT-TSCEEEESSCC
T ss_pred HHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHhCCCCEEEEECCCCCH-HHHHHHHc-CCCEEEEcCCC
Confidence 4556666667666554 78888888755443 67777766 99999998653
No 322
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=54.83 E-value=9.3 Score=29.19 Aligned_cols=34 Identities=12% Similarity=0.232 Sum_probs=22.0
Q ss_pred ecceEEEEeCC-CchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDD-SNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDd-sdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|.|++.+-+ +++.++++.+.+.++..|+++..
T Consensus 65 ~vdgii~~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 99 (289)
T 3brs_A 65 KPDVILLAAADYEKTYDAAKEIKDAGIKLIVIDSG 99 (289)
T ss_dssp CCSEEEECCSCTTTTHHHHTTTGGGTCEEEEESSC
T ss_pred CCCEEEEeCCChHHhHHHHHHHHHCCCcEEEECCC
Confidence 56777766433 34456777777777777777653
No 323
>2e5f_A Hypothetical protein PH0510; structural genomics, sugar binding protein, NPPSFA, national on protein structural and functional analyses; 1.35A {Pyrococcus horikoshii} PDB: 2dec_A* 2df8_A 2cb0_A*
Probab=54.82 E-value=31 Score=28.52 Aligned_cols=59 Identities=8% Similarity=0.012 Sum_probs=46.3
Q ss_pred HHhhh-hcEEEEEe-------------ec--ceEEEEeCCCchHHHHHHHHHcCccEEEEecCCchhhhhhhccccc
Q 037201 109 DELKR-AWFCVRNV-------------RF--GCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 109 ~eLrR-AGv~Vr~V-------------~v--~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
.-|.+ .|+.|. . .- |++|.+|=.-+=.++++.++....++|.|-+. ++.|.+.||.-+.
T Consensus 51 ~~l~~~~g~~v~-~~~se~~~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~aka~viaIT~~-~S~La~~ad~~l~ 125 (325)
T 2e5f_A 51 MVTNMHGGLGIA-LPCSEFLYSKETYPIGEVELAVGISRSGETTEILLALEKINVKKLGITTR-ESSLTRMCDYSLV 125 (325)
T ss_dssp HHHHHTTSEEEE-EEHHHHHHHGGGSCCCSCSEEEEECSSSCCHHHHHHHHTCCSCEEEEESS-SCHHHHHSSEEEE
T ss_pred HHHHHHhCCCEE-EechHHhhcCcccCCCCCeEEEEEeCCCCCHHHHHHHHHhCCCEEEEECC-CCHHHHhcCEEEe
Confidence 34566 677777 3 22 78899998888888888888644999999998 8999999997653
No 324
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=54.64 E-value=5.3 Score=31.60 Aligned_cols=33 Identities=12% Similarity=0.025 Sum_probs=28.6
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEec
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGD 154 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd 154 (177)
+.|.|++.+.+.+...+++.+++.|++.-++|.
T Consensus 193 ~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~~~~ 225 (356)
T 3ipc_A 193 GVSIIYWGGLHTEAGLIIRQAADQGLKAKLVSG 225 (356)
T ss_dssp TCCEEEEESCHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred CCCEEEEccCchHHHHHHHHHHHCCCCCcEEEe
Confidence 578888888899999999999999998777764
No 325
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=54.51 E-value=8.8 Score=29.69 Aligned_cols=16 Identities=13% Similarity=0.173 Sum_probs=7.0
Q ss_pred HHHHHHHcCccEEEEe
Q 037201 138 VFQEATLRCLKMVVVG 153 (177)
Q Consensus 138 ~lr~Ar~r~l~TVVVG 153 (177)
+++.+.+.++..|+++
T Consensus 92 ~~~~~~~~~iPvV~~~ 107 (293)
T 2iks_A 92 FYQRWANDPFPIVALD 107 (293)
T ss_dssp HHHTTTTSSSCEEEEE
T ss_pred HHHHHHhCCCCEEEEC
Confidence 3344444444444444
No 326
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=54.30 E-value=7.1 Score=25.63 Aligned_cols=23 Identities=13% Similarity=-0.003 Sum_probs=19.4
Q ss_pred hcCCCcCChhHHHHHHHhhhhhh
Q 037201 51 RNQGRFYNNDKLVNHFRQIHEGE 73 (177)
Q Consensus 51 ~CGrrf~t~~~L~kHFkqlHerE 73 (177)
.|+..|.+.+.|++|.-..|.-.
T Consensus 8 ~C~~~f~~~~~l~~Hv~~~Hv~~ 30 (64)
T 1zw8_A 8 ECPESASSLFDLQRHLLKDHVSQ 30 (64)
T ss_dssp TCCCCCSSHHHHHHHHHHHSCCC
T ss_pred CCCCcCCCHHHHHHHHHhhccCc
Confidence 39999999999999987777543
No 327
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=53.95 E-value=18 Score=28.75 Aligned_cols=33 Identities=9% Similarity=0.168 Sum_probs=19.0
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|.|++.+.+.+ .+.++.+.+.++..|+++..
T Consensus 119 ~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~~~~~ 151 (332)
T 2o20_A 119 QVDGIVYMGSSLD-EKIRTSLKNSRTPVVLVGTI 151 (332)
T ss_dssp TCSEEEECSSCCC-HHHHHHHHHHCCCEEEESCC
T ss_pred CCCEEEEeCCCCC-HHHHHHHHhCCCCEEEEccc
Confidence 5666666653322 34555556667777776643
No 328
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=53.61 E-value=9.6 Score=30.31 Aligned_cols=33 Identities=3% Similarity=0.004 Sum_probs=28.3
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEec
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGD 154 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd 154 (177)
+.|.|++.+.+.+...+++.+++.|++.-++|.
T Consensus 204 ~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~~~~ 236 (366)
T 3td9_A 204 NPDAIYITGYYPEIALISRQARQLGFTGYILAG 236 (366)
T ss_dssp CCSEEEECSCHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred CCCEEEEccchhHHHHHHHHHHHcCCCceEEee
Confidence 678888878889999999999999998777764
No 329
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=53.11 E-value=18 Score=27.76 Aligned_cols=34 Identities=15% Similarity=0.258 Sum_probs=24.6
Q ss_pred ecceEEEEeCCC-chHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDDS-NFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDds-df~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|-|++.+.++ ...++++.+.+.++..|.++..
T Consensus 61 ~vdgiii~~~~~~~~~~~~~~~~~~~ipvV~~~~~ 95 (303)
T 3d02_A 61 KVDAITIVPNDANVLEPVFKKARDAGIVVLTNESP 95 (303)
T ss_dssp TCSEEEECCSCHHHHHHHHHHHHHTTCEEEEESCT
T ss_pred CCCEEEEecCChHHHHHHHHHHHHCCCeEEEEecC
Confidence 678787776554 3456778888888888888654
No 330
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=52.23 E-value=18 Score=27.88 Aligned_cols=32 Identities=9% Similarity=0.107 Sum_probs=20.0
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|-|++.+-+.+ .+.++.+. .++..|+++..
T Consensus 64 ~vdgiI~~~~~~~-~~~~~~l~-~~iPvV~~~~~ 95 (285)
T 3c3k_A 64 MVDGVITMDALSE-LPELQNII-GAFPWVQCAEY 95 (285)
T ss_dssp CCSEEEECCCGGG-HHHHHHHH-TTSSEEEESSC
T ss_pred CCCEEEEeCCCCC-hHHHHHHh-cCCCEEEEccc
Confidence 6777777654332 35566666 77777777654
No 331
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=52.07 E-value=19 Score=25.94 Aligned_cols=43 Identities=16% Similarity=0.171 Sum_probs=27.0
Q ss_pred ceEEEEeCCCc-------hHHHHHHHHHcCccEEE--EecCCchhhhhhhcc
Q 037201 124 GCLMVVSDDSN-------FVEVFQEATLRCLKMVV--VGDMSDGALKRIANA 166 (177)
Q Consensus 124 ~clvLVSDdsd-------f~~~lr~Ar~r~l~TVV--VGd~~~~~L~r~Ad~ 166 (177)
..|||+||-.+ .....+.+++.|+...+ ||+.+...|.+.|+.
T Consensus 105 ~~iiliTDG~~~~~~~~~~~~~~~~~~~~~i~i~~igvg~~~~~~L~~ia~~ 156 (182)
T 1shu_X 105 SIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLDFEQAQLERIADS 156 (182)
T ss_dssp EEEEEEECCCCCTTHHHHHHHHHHHHHHTTCEEEEEECSSCCHHHHHHHSSS
T ss_pred eEEEEECCCCcCCCCchhHHHHHHHHHhCCCEEEEEeCCcCCHHHHHHHhCC
Confidence 46888988432 13466777788877544 455554567777654
No 332
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=51.90 E-value=17 Score=28.83 Aligned_cols=33 Identities=12% Similarity=0.213 Sum_probs=22.0
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|.|++.+-+.+ .+.++.+.+.++..|+++..
T Consensus 116 ~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~~~~~ 148 (332)
T 2hsg_A 116 QVDGIIFMSGNVT-EEHVEELKKSPVPVVLAASI 148 (332)
T ss_dssp SSCCEEECCSSCC-HHHHHHHTTSSSCEEEESCC
T ss_pred CCcEEEEecCCCC-HHHHHHHHhCCCCEEEEccc
Confidence 6777777664433 25677777778888887654
No 333
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=51.65 E-value=9.7 Score=28.87 Aligned_cols=33 Identities=15% Similarity=-0.008 Sum_probs=17.8
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|-||+.+-+.+ .+.++.+++.++..|+++..
T Consensus 55 ~vdgiI~~~~~~~-~~~~~~~~~~~iPvV~~~~~ 87 (276)
T 2h0a_A 55 LTDGLILASYDLT-ERFEEGRLPTERPVVLVDAQ 87 (276)
T ss_dssp CCSEEEEESCCCC-------CCSCSSCEEEESSC
T ss_pred CCCEEEEecCCCC-HHHHHHHhhcCCCEEEEecc
Confidence 6777777654433 25666666677777777654
No 334
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=51.62 E-value=11 Score=29.40 Aligned_cols=32 Identities=13% Similarity=0.108 Sum_probs=26.8
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEe
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVG 153 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVG 153 (177)
+.|.|++.+++.+...+++.+++.|++.-++|
T Consensus 193 ~~d~i~~~~~~~~a~~~~~~~~~~g~~~~~~~ 224 (346)
T 1usg_A 193 NIDFVYYGGYYPEMGQMLRQARSVGLKTQFMG 224 (346)
T ss_dssp TCCEEEEESCHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCCEEEEcCcchHHHHHHHHHHHcCCCCeEEe
Confidence 56888888888889999999999998765665
No 335
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=51.49 E-value=12 Score=28.43 Aligned_cols=48 Identities=10% Similarity=0.093 Sum_probs=33.3
Q ss_pred CchHHhhhhcEEEEEe-------------------ecceEEEEeCCCchHHHHH-HHHHcCccEEEEecCC
Q 037201 106 GFADELKRAWFCVRNV-------------------RFGCLMVVSDDSNFVEVFQ-EATLRCLKMVVVGDMS 156 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V-------------------~v~clvLVSDdsdf~~~lr-~Ar~r~l~TVVVGd~~ 156 (177)
|+..++++.|+.+... ++|.||+.+-+ .+.++ .+.+.|+..|+++...
T Consensus 29 gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~dgiIi~~~~---~~~~~~~l~~~~iPvV~~~~~~ 96 (277)
T 3e61_A 29 GVEDVALAHGYQVLIGNSDNDIKKAQGYLATFVSHNCTGMISTAFN---ENIIENTLTDHHIPFVFIDRIN 96 (277)
T ss_dssp HHHHHHHHTTCCEEEEECTTCHHHHHHHHHHHHHTTCSEEEECGGG---HHHHHHHHHHC-CCEEEGGGCC
T ss_pred HHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCC---hHHHHHHHHcCCCCEEEEeccC
Confidence 4566677777766554 78888887732 45677 7888888888887653
No 336
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=51.49 E-value=15 Score=29.12 Aligned_cols=34 Identities=12% Similarity=0.323 Sum_probs=25.6
Q ss_pred ecceEEEEeCCCc-hHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDDSN-FVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsd-f~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|-|++.+.+.+ +.+.++.+.+.++..|+++..
T Consensus 62 ~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 96 (325)
T 2x7x_A 62 GVDLLIISANEAAPMTPIVEEAYQKGIPVILVDRK 96 (325)
T ss_dssp TCSEEEECCSSHHHHHHHHHHHHHTTCCEEEESSC
T ss_pred CCCEEEEeCCCHHHHHHHHHHHHHCCCeEEEeCCC
Confidence 7888888765543 457788888889998888754
No 337
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=56.45 E-value=3.2 Score=33.00 Aligned_cols=39 Identities=18% Similarity=0.271 Sum_probs=27.4
Q ss_pred CchHHHHHHHHHcCccEEEEecC-Cchhhhhhhccccchh
Q 037201 133 SNFVEVFQEATLRCLKMVVVGDM-SDGALKRIANAFFSWS 171 (177)
Q Consensus 133 sdf~~~lr~Ar~r~l~TVVVGd~-~~~~L~r~Ad~~~sW~ 171 (177)
.++..+++.....+=.+++|||+ +|-.-.+.|++.+.|.
T Consensus 185 ~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g 224 (263)
T 2yj3_A 185 EDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMG 224 (263)
Confidence 35666666666555678999996 3445677888888885
No 338
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=50.66 E-value=13 Score=26.52 Aligned_cols=43 Identities=14% Similarity=0.191 Sum_probs=25.0
Q ss_pred CCCchHHhhhhcEEEEEeecceEEEEeCCCchHHHHHHHHHcCccEEEEecCCch
Q 037201 104 GYGFADELKRAWFCVRNVRFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMSDG 158 (177)
Q Consensus 104 gygLa~eLrRAGv~Vr~V~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~~~ 158 (177)
|..++..|++.|+.|..+ ..|. +-++.+++.|+. ++.||.++.
T Consensus 19 G~~la~~L~~~g~~v~vi--------d~~~---~~~~~~~~~g~~-~i~gd~~~~ 61 (140)
T 3fwz_A 19 GSLLGEKLLASDIPLVVI--------ETSR---TRVDELRERGVR-AVLGNAANE 61 (140)
T ss_dssp HHHHHHHHHHTTCCEEEE--------ESCH---HHHHHHHHTTCE-EEESCTTSH
T ss_pred HHHHHHHHHHCCCCEEEE--------ECCH---HHHHHHHHcCCC-EEECCCCCH
Confidence 344788999998765443 2222 334455555653 567776544
No 339
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=49.74 E-value=14 Score=29.78 Aligned_cols=33 Identities=9% Similarity=0.223 Sum_probs=20.4
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|.||+.+-+.+ .+.++.+.+.++..|+++..
T Consensus 122 ~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~i~~~ 154 (348)
T 3bil_A 122 GVDGIICVPNEEC-ANQLEDLQKQGMPVVLVDRE 154 (348)
T ss_dssp TCSCEEECCCGGG-HHHHHHHHHC-CCEEEESSC
T ss_pred CCCEEEEeCCCCC-hHHHHHHHhCCCCEEEEccc
Confidence 6777777654433 35666677777777777653
No 340
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=49.51 E-value=30 Score=27.25 Aligned_cols=33 Identities=3% Similarity=0.101 Sum_probs=28.6
Q ss_pred ecceEEEEeCCCc---hHHHHHHHHHcCccEEEEec
Q 037201 122 RFGCLMVVSDDSN---FVEVFQEATLRCLKMVVVGD 154 (177)
Q Consensus 122 ~v~clvLVSDdsd---f~~~lr~Ar~r~l~TVVVGd 154 (177)
.-|+++++|-... =.++...|+++|+.+|.|-.
T Consensus 77 ~~D~vii~S~Sg~n~~~ie~A~~ake~G~~vIaITs 112 (170)
T 3jx9_A 77 AVDRVLIFTPDTERSDLLASLARYDAWHTPYSIITL 112 (170)
T ss_dssp TTCEEEEEESCSCCHHHHHHHHHHHHHTCCEEEEES
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 6799999997665 67888888899999999998
No 341
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=48.97 E-value=5.8 Score=29.07 Aligned_cols=21 Identities=24% Similarity=0.414 Sum_probs=17.1
Q ss_pred hhhhhcCCCcCChhHHHHHHHhhh
Q 037201 47 CLLIRNQGRFYNNDKLVNHFRQIH 70 (177)
Q Consensus 47 ~Lc~~CGrrf~t~~~L~kHFkqlH 70 (177)
..|-.||.+|++ |.+|..+-|
T Consensus 22 iiClecGK~fK~---LkRHL~~~h 42 (87)
T 2jsp_A 22 IVCLECGGSFKS---LKRHLTTHH 42 (87)
T ss_dssp EECTBTCCEESB---HHHHHHHTT
T ss_pred eEecccchhhHH---HHHHHHHcc
Confidence 349999999995 779988755
No 342
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=48.96 E-value=21 Score=25.21 Aligned_cols=10 Identities=0% Similarity=-0.237 Sum_probs=8.6
Q ss_pred hhhcCCCcCC
Q 037201 49 LIRNQGRFYN 58 (177)
Q Consensus 49 c~~CGrrf~t 58 (177)
||+||.....
T Consensus 50 CPvCgs~l~~ 59 (112)
T 1l8d_A 50 CPVCGRELTD 59 (112)
T ss_dssp CTTTCCEECH
T ss_pred CCCCCCcCCH
Confidence 9999998764
No 343
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=48.92 E-value=7.5 Score=25.49 Aligned_cols=25 Identities=16% Similarity=-0.008 Sum_probs=21.3
Q ss_pred hhhhh--hcCCCcCChhHHHHHHHhhh
Q 037201 46 NCLLI--RNQGRFYNNDKLVNHFRQIH 70 (177)
Q Consensus 46 ~~Lc~--~CGrrf~t~~~L~kHFkqlH 70 (177)
.+.|. -|++.++...+|++|.+.-|
T Consensus 38 ~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 38 PLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred CCEeeCCCCcCCCCChHHHHhhccccC
Confidence 56687 69999999999999998765
No 344
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.86 E-value=9.2 Score=27.01 Aligned_cols=31 Identities=16% Similarity=0.171 Sum_probs=24.3
Q ss_pred hhhhhhcCCCcC-------ChhHHHHHHHhhhhhhhhh
Q 037201 46 NCLLIRNQGRFY-------NNDKLVNHFRQIHEGEQKK 76 (177)
Q Consensus 46 ~~Lc~~CGrrf~-------t~~~L~kHFkqlHerEr~K 76 (177)
+--|..|++.+. .=..|.+|.+..|..|=.|
T Consensus 28 ~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~e~~~ 65 (76)
T 2djr_A 28 YATCRLCGRQVSRGPGVNVGTTALWKHLKSMHREELEK 65 (76)
T ss_dssp CEEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHHHHHH
T ss_pred EEECCCCCCccCCCCCCCCchHHHHHHHHHHCHHHHHh
Confidence 355999999887 2358999999999888444
No 345
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=48.75 E-value=9.6 Score=28.27 Aligned_cols=33 Identities=12% Similarity=0.063 Sum_probs=20.8
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEec
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGD 154 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd 154 (177)
.+|.+++..-+..-.++++.+-+.|++.+++-.
T Consensus 77 ~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~~ 109 (144)
T 2d59_A 77 KIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQY 109 (144)
T ss_dssp CCSEEEECSCHHHHHHHHHHHHHHTCSEEEECT
T ss_pred CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEECC
Confidence 466655555555556777777777777666543
No 346
>3sm9_A Mglur3, metabotropic glutamate receptor 3; structural genomics, structural genomics consortium, SGC, CE membrane, G-protein coupled receptor; HET: Z99; 2.26A {Homo sapiens}
Probab=47.81 E-value=17 Score=31.29 Aligned_cols=35 Identities=9% Similarity=0.010 Sum_probs=28.5
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEE-EecCC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVV-VGDMS 156 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVV-VGd~~ 156 (177)
+.+.+++.++..+...+++.|++.|+..+. .+|.+
T Consensus 243 ~a~vIi~~~~~~~~~~l~~~~~~~g~~~~wI~s~~w 278 (479)
T 3sm9_A 243 NARVVVLFMRSDDSRELIAAASRANASFTWVASDGW 278 (479)
T ss_dssp TCCEEEEECCHHHHHHHHHHHHHTTCCCEEEECTTT
T ss_pred CCeEEEEEcChHHHHHHHHHHHHhCCEEEEEEechh
Confidence 678899999999999999999999985444 44554
No 347
>1tzb_A Glucose-6-phosphate isomerase, conjectural; enzyme, crenarchaeon, hyperthermophIle, PGI family; 1.16A {Pyrobaculum aerophilum} SCOP: c.80.1.1 PDB: 1tzc_A* 1x9h_A* 1x9i_A*
Probab=47.72 E-value=23 Score=29.07 Aligned_cols=44 Identities=20% Similarity=0.142 Sum_probs=34.2
Q ss_pred ecceEEEEeCC---CchHHHHHHHHHcCccEEEEecCCchhhhhhhcccc
Q 037201 122 RFGCLMVVSDD---SNFVEVFQEATLRCLKMVVVGDMSDGALKRIANAFF 168 (177)
Q Consensus 122 ~v~clvLVSDd---sdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~ 168 (177)
.-|.+|.+|-. .+-.++++.|+++|.++|.|-+.. .|.+. |+.+
T Consensus 79 ~~dlvI~iS~SG~T~e~~~a~~~ak~~g~~~iaIT~~~--~La~~-~~~l 125 (302)
T 1tzb_A 79 RDGLLIAVSYSGNTIETLYTVEYAKRRRIPAVAITTGG--RLAQM-GVPT 125 (302)
T ss_dssp SSSEEEEECSSSCCHHHHHHHHHHHHTTCCEEEEESST--TGGGS-SSCE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCeEEEECCCc--hHHHC-CeeE
Confidence 34667777754 456677888899999999999985 88888 7665
No 348
>2e7z_A Acetylene hydratase AHY; tungstoprotein, DMSO reductase family, iron-sulfur-cluster, lyase; HET: MGD; 1.26A {Pelobacter acetylenicus}
Probab=47.47 E-value=19 Score=32.90 Aligned_cols=47 Identities=15% Similarity=0.315 Sum_probs=37.1
Q ss_pred ecceEEEEeCCC------chHHHHHHHHHcCccEEEEecCCchhhhhhhccccc
Q 037201 122 RFGCLMVVSDDS------NFVEVFQEATLRCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 122 ~v~clvLVSDds------df~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
..|+|+++--|. .+...|+.|+++|.+-|||.=. .......||.|++
T Consensus 160 ~ad~il~~G~n~~~~~p~~~~~~l~~a~~~G~klividPr-~t~ta~~Ad~~l~ 212 (727)
T 2e7z_A 160 DSNCLLFIGKNLSNHNWVSQFNDLKAALKRGCKLIVLDPR-RTKVAEMADIWLP 212 (727)
T ss_dssp TCSEEEEESCCCBTTBSHHHHHHHHHHHHHTCEEEEECSS-CCHHHHHCSEEEC
T ss_pred cCCEEEEECCChhhcCCHHHHHHHHHHHHCCCeEEEECCC-CCcchhhcceeec
Confidence 678888886552 5667889999999999999765 3577888999984
No 349
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=47.39 E-value=22 Score=32.76 Aligned_cols=62 Identities=18% Similarity=0.105 Sum_probs=44.7
Q ss_pred HHhhhhcEEEEEe---------------ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC-Cchhhhhhhccccchh
Q 037201 109 DELKRAWFCVRNV---------------RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM-SDGALKRIANAFFSWS 171 (177)
Q Consensus 109 ~eLrRAGv~Vr~V---------------~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~-~~~~L~r~Ad~~~sW~ 171 (177)
.+|+++|+.|-.+ |++.++.-....+=..+++.-++. -.++.|||+ +|-.--+.||+.+.+.
T Consensus 467 ~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg 544 (645)
T 3j08_A 467 QELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG 544 (645)
T ss_dssp HHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEEC
T ss_pred HHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEeCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeC
Confidence 5688899888776 666555444456777777777766 578899995 5556667899888774
No 350
>4f11_A Gamma-aminobutyric acid type B receptor subunit 2; venus flytrap module, G-protein coupled receptor, signaling; 2.38A {Homo sapiens} PDB: 4f12_A*
Probab=47.20 E-value=13 Score=30.48 Aligned_cols=28 Identities=14% Similarity=-0.027 Sum_probs=25.1
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccE
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKM 149 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~T 149 (177)
+.|.|++.++..+...+++.|++.|+..
T Consensus 206 ~~~vii~~~~~~~~~~~~~~a~~~g~~~ 233 (433)
T 4f11_A 206 DVRIILGQFDQNMAAKVFCCAYEENMYG 233 (433)
T ss_dssp TCCEEEEECCHHHHHHHHHHHHHTTCCS
T ss_pred CCeEEEEeCcHHHHHHHHHHHHHcCCCC
Confidence 7788999999999999999999999865
No 351
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=45.83 E-value=28 Score=26.70 Aligned_cols=58 Identities=10% Similarity=0.041 Sum_probs=29.2
Q ss_pred HHhhhhcEEEEEe---------------ecceEEEEeCCCchHHHHHHHHHcCc---cEEEEecCC-chhhhhhhccc
Q 037201 109 DELKRAWFCVRNV---------------RFGCLMVVSDDSNFVEVFQEATLRCL---KMVVVGDMS-DGALKRIANAF 167 (177)
Q Consensus 109 ~eLrRAGv~Vr~V---------------~v~clvLVSDdsdf~~~lr~Ar~r~l---~TVVVGd~~-~~~L~r~Ad~~ 167 (177)
..|+.+|+.+-.+ |++-++-.. .+.-..+.+.+++.|+ .+++|||+. |-...+.|++.
T Consensus 62 ~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~~~-k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~ 138 (195)
T 3n07_A 62 KALMNAGIEIAIITGRRSQIVENRMKALGISLIYQGQ-DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALR 138 (195)
T ss_dssp HHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEECSC-SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEE
T ss_pred HHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEeeCC-CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCE
Confidence 4567777666555 444322111 2233333344445555 688888863 22444455444
No 352
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=45.23 E-value=16 Score=28.16 Aligned_cols=28 Identities=14% Similarity=0.309 Sum_probs=23.8
Q ss_pred EeCCC--chHHHHHHHHHcCccEEEEecCC
Q 037201 129 VSDDS--NFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 129 VSDds--df~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
-|||+ ...+|++.|.+.|+..+++-|-+
T Consensus 12 ~Sd~g~~~~~e~v~~A~~~Gl~~iaiTDH~ 41 (245)
T 1m65_A 12 ASTHAYSTLSDYIAQAKQKGIKLFAITDHG 41 (245)
T ss_dssp TSTTCCCCHHHHHHHHHHHTCCEEEEEEEC
T ss_pred CCCCCCCcHHHHHHHHHHCCCCEEEECCCC
Confidence 37754 58899999999999999999964
No 353
>3i45_A Twin-arginine translocation pathway signal protei; structural genomics; 1.36A {Rhodospirillum rubrum}
Probab=45.01 E-value=25 Score=28.28 Aligned_cols=33 Identities=21% Similarity=0.131 Sum_probs=27.3
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCc--cEEEEec
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCL--KMVVVGD 154 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l--~TVVVGd 154 (177)
+.|.|++.+.+.+...+++.+++.|+ +.-++|.
T Consensus 199 ~~d~v~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~ 233 (387)
T 3i45_A 199 EPEGLFNVLFGADLPKFVREGRVRGLFAGRQVVSM 233 (387)
T ss_dssp CCSEEEECCCTTHHHHHHHHHHHHTSSTTCEEEEE
T ss_pred CCCEEEEcCccHHHHHHHHHHHHcCCCCCCeEEee
Confidence 67888888889999999999999998 3455654
No 354
>2vpz_A Thiosulfate reductase; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_A* 2vpw_A* 2vpy_A*
Probab=44.93 E-value=23 Score=32.72 Aligned_cols=47 Identities=15% Similarity=0.151 Sum_probs=36.7
Q ss_pred ecceEEEEeCC-----C-chHHHHHHHHHcCccEEEEecCCchhhhhhhccccc
Q 037201 122 RFGCLMVVSDD-----S-NFVEVFQEATLRCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 122 ~v~clvLVSDd-----s-df~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
..|+|+++--| . .+..-|+.|+++|.+.|||.=.- ......||.|++
T Consensus 199 ~ad~il~~G~n~~~~~p~~~~~~~~~a~~~G~klividPr~-t~ta~~Ad~~l~ 251 (765)
T 2vpz_A 199 NARYIVLIGHHIGEDTHNTQLQDFALALKNGAKVVVVDPRF-STAAAKAHRWLP 251 (765)
T ss_dssp GCSEEEEESCCBTTBCCHHHHHHHHHHHHTTCEEEEECSBC-CTTGGGCSEEEC
T ss_pred cCCEEEEEeCChhhcCChHHHHHHHHHHHCCCEEEEECCCC-CcchhhCCeEeC
Confidence 56788888655 2 56777899999999999997653 567888999985
No 355
>1pea_A Amidase operon; gene regulator, receptor, binding protein; 2.10A {Pseudomonas aeruginosa} SCOP: c.93.1.1 PDB: 1qo0_A 1qnl_A
Probab=44.81 E-value=16 Score=29.44 Aligned_cols=34 Identities=9% Similarity=0.057 Sum_probs=27.7
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCcc---EEEEecC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLK---MVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~---TVVVGd~ 155 (177)
+.|.|++.+|+.+-..+++.+++.|++ ..++|..
T Consensus 197 ~pdaI~~~~~~~~a~~~~~~~~~~G~~~~~~~~~~~~ 233 (385)
T 1pea_A 197 RADVVFSTVVGTGTAELYRAIARRYGDGRRPPIASLT 233 (385)
T ss_dssp TCSEEEEECCTHHHHHHHHHHHHHHCSSCCCCEEESS
T ss_pred CCCEEEEecccccHHHHHHHHHHcCCCcCCceEEecc
Confidence 578888888888899999999999987 4456654
No 356
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=44.73 E-value=8.7 Score=26.86 Aligned_cols=31 Identities=16% Similarity=0.108 Sum_probs=24.2
Q ss_pred hhhhhhcCCCcC---ChhHHHHHHHhhhhhhhhh
Q 037201 46 NCLLIRNQGRFY---NNDKLVNHFRQIHEGEQKK 76 (177)
Q Consensus 46 ~~Lc~~CGrrf~---t~~~L~kHFkqlHerEr~K 76 (177)
.-.|..|+..+. +-..|.+|.+..|..|-.+
T Consensus 29 ~a~Ck~C~~~l~~~g~TSnL~rHL~~~H~~e~~~ 62 (73)
T 2ct5_A 29 KIYCRICMAQIAYSGNTSNLSYHLEKNHPEEFCE 62 (73)
T ss_dssp CCEETTTTEECCCCSSTHHHHHHHHHSCHHHHHH
T ss_pred EEECCCCCccccCCCChHhHHHHHHHHCHHHHHH
Confidence 356999999643 4578999999999877655
No 357
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=43.64 E-value=15 Score=28.10 Aligned_cols=33 Identities=3% Similarity=0.010 Sum_probs=24.1
Q ss_pred ecceEEEEeCC-CchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDD-SNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDd-sdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|-||+.+-+ ..+.+.++.+. .|+..|+++..
T Consensus 63 ~vdgiii~~~~~~~~~~~~~~~~-~~iPvV~~~~~ 96 (304)
T 3o1i_D 63 GANAIILGTVDPHAYEHNLKSWV-GNTPVFATVNQ 96 (304)
T ss_dssp TCSEEEECCSSTTSSTTTHHHHT-TTSCEEECSSC
T ss_pred CCCEEEEeCCChhHHHHHHHHHc-CCCCEEEecCC
Confidence 67887777544 34566788888 89999998654
No 358
>3i0z_A Putative tagatose-6-phosphate ketose/aldose isome; NP_344614.1, putative putative tagatose-6-phosphate ketose/A isomerase; HET: MSE; 1.70A {Streptococcus pneumoniae TIGR4}
Probab=43.51 E-value=23 Score=30.75 Aligned_cols=44 Identities=18% Similarity=0.110 Sum_probs=35.3
Q ss_pred cceEEEEeCCC---chHHHHHHHHHc--CccEEEEecCCchhhhhhhcc
Q 037201 123 FGCLMVVSDDS---NFVEVFQEATLR--CLKMVVVGDMSDGALKRIANA 166 (177)
Q Consensus 123 v~clvLVSDds---df~~~lr~Ar~r--~l~TVVVGd~~~~~L~r~Ad~ 166 (177)
-|.+|.+|-.- |-...++.|+++ |.+||.|-+..++.|.+.||.
T Consensus 110 ~dl~i~iS~SG~T~e~~~al~~ak~~~~g~~~i~IT~~~~s~la~~ad~ 158 (389)
T 3i0z_A 110 ATVLVSFARSGNSPESLATVDLAKSLVDELYQVTITCAADGKLALQAHG 158 (389)
T ss_dssp EEEEEEEESSSCCHHHHHHHHHHHHHCSSEEEEEEESCTTSHHHHTSSS
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHccc
Confidence 45677777654 555677888998 999999988777899999995
No 359
>2iv2_X Formate dehydrogenase H; oxidoreductase, 4Fe-4S, anaerobic, complete proteome, direct protein sequencing, Fe4S4, iron, iron sulfur cluster; HET: 2MD MGD; 2.27A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 1fdi_A* 1fdo_A* 1aa6_A*
Probab=43.11 E-value=22 Score=32.50 Aligned_cols=47 Identities=15% Similarity=0.109 Sum_probs=36.6
Q ss_pred ecceEEEEeCC-----CchHHHHHHHHHcCccEEEEecCCchhhhhhhccccc
Q 037201 122 RFGCLMVVSDD-----SNFVEVFQEATLRCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 122 ~v~clvLVSDd-----sdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
..|+||++.-| ..+..-|+.|+++|.+-|||.-.- ......||.|++
T Consensus 166 ~ad~il~~G~n~~~~~p~~~~~l~~a~~~G~klividPr~-t~ta~~Ad~~l~ 217 (715)
T 2iv2_X 166 NTDLVFVFGYNPADSHPIVANHVINAKRNGAKIIVCDPRK-IETARIADMHIA 217 (715)
T ss_dssp GCSEEEEESCCHHHHCHHHHHHHHHHHHTTCEEEEECSSC-CHHHHTCSEEEC
T ss_pred cCCEEEEEcCChHHhCHHHHHHHHHHHHCCCeEEEEcCCC-CchhHhhCEEec
Confidence 67888888655 345567889999999999997653 577889999986
No 360
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=43.00 E-value=37 Score=25.47 Aligned_cols=34 Identities=21% Similarity=0.195 Sum_probs=20.2
Q ss_pred HHHHHHHHcCccEEEEecC-Cchhhhhhhccccchh
Q 037201 137 EVFQEATLRCLKMVVVGDM-SDGALKRIANAFFSWS 171 (177)
Q Consensus 137 ~~lr~Ar~r~l~TVVVGd~-~~~~L~r~Ad~~~sW~ 171 (177)
..++...+. ..+++|||+ +|-...+.|++.+.|.
T Consensus 197 ~~~k~~~~~-~~~~~vGD~~nDi~~~~~Ag~~va~~ 231 (280)
T 3skx_A 197 EKVKEVQQK-YVTAMVGDGVNDAPALAQADVGIAIG 231 (280)
T ss_dssp HHHHHHHTT-SCEEEEECTTTTHHHHHHSSEEEECS
T ss_pred HHHHHHHhc-CCEEEEeCCchhHHHHHhCCceEEec
Confidence 344444333 377888885 3445667777766663
No 361
>2kpo_A Rossmann 2X2 fold protein; de novo designed, rossmann fold, NESG, GFT structural G PSI-2, protein structure initiative; NMR {Artificial gene}
Probab=42.76 E-value=16 Score=27.36 Aligned_cols=33 Identities=18% Similarity=0.155 Sum_probs=27.2
Q ss_pred ecceEEEEeCCCchHHHHHHHH--HcCccEEEEec
Q 037201 122 RFGCLMVVSDDSNFVEVFQEAT--LRCLKMVVVGD 154 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar--~r~l~TVVVGd 154 (177)
+|..|+|||.|.++...-+.|. +-.++|--|-.
T Consensus 51 nikvlilvsndeeldkakelaqkmeidvrtrkvts 85 (110)
T 2kpo_A 51 NIKVLILVSNDEELDKAKELAQKMEIDVRTRKVTS 85 (110)
T ss_dssp SEEEEEEESSHHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CeEEEEEEcChHHHHHHHHHHHhhceeeeeeecCC
Confidence 7889999999999998888888 46777766643
No 362
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=42.36 E-value=23 Score=27.34 Aligned_cols=41 Identities=12% Similarity=-0.016 Sum_probs=30.9
Q ss_pred chHHhhhhcEEEEEe---------------------------ecceEEEE--------eCCCchHHHHHHHHHcCc
Q 037201 107 FADELKRAWFCVRNV---------------------------RFGCLMVV--------SDDSNFVEVFQEATLRCL 147 (177)
Q Consensus 107 La~eLrRAGv~Vr~V---------------------------~v~clvLV--------SDdsdf~~~lr~Ar~r~l 147 (177)
+.+.|+|||+.|.++ ..|.|++. .+|.++.++|+.+-++|-
T Consensus 27 p~~~l~~ag~~V~~~s~~~~~v~~~~G~~v~~d~~l~~v~~~~yD~liiPGG~g~~~l~~~~~~~~~l~~~~~~~k 102 (177)
T 4hcj_A 27 SKKIFESAGYKTKVSSTFIGTAQGKLGGMTNIDLLFSEVDAVEFDAVVFVGGIGCITLWDDWRTQGLAKLFLDNQK 102 (177)
T ss_dssp HHHHHHHTTCEEEEEESSSEEEEETTSCEEEECEEGGGCCGGGCSEEEECCSGGGGGGTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHCCCEEEEEECCCCeEeeCCCCEEecCccHHHCCHhHCCEEEECCCccHHHHhhCHHHHHHHHHHHHhCC
Confidence 457899999999998 34667764 367778888888877764
No 363
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=42.32 E-value=51 Score=24.96 Aligned_cols=32 Identities=22% Similarity=0.247 Sum_probs=13.9
Q ss_pred ecceEEEEeCCCchHHHHHHHHH-cCccEEEEec
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATL-RCLKMVVVGD 154 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~-r~l~TVVVGd 154 (177)
++|.|++.+-+.+ ..+++...+ .++..|+++.
T Consensus 63 ~vdgii~~~~~~~-~~~~~~l~~~~~iPvV~~~~ 95 (289)
T 1dbq_A 63 RVDGLLVMCSEYP-EPLLAMLEEYRHIPMVVMDW 95 (289)
T ss_dssp TCSEEEEECSCCC-HHHHHHHHHTTTSCEEEEEC
T ss_pred CCCEEEEEeccCC-HHHHHHHHhccCCCEEEEcc
Confidence 4555555443321 122333322 4555555554
No 364
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=42.29 E-value=13 Score=30.58 Aligned_cols=23 Identities=22% Similarity=0.187 Sum_probs=19.4
Q ss_pred hhhhhhcCCCcCC-hhHHHHHHHh
Q 037201 46 NCLLIRNQGRFYN-NDKLVNHFRQ 68 (177)
Q Consensus 46 ~~Lc~~CGrrf~t-~~~L~kHFkq 68 (177)
+.-|-+||..|.+ =.+|+.|.++
T Consensus 169 ~L~C~~C~~~f~n~~~~LK~HL~~ 192 (204)
T 3sp4_A 169 DLKCWRCGETFGRHFTKLKAHLQE 192 (204)
T ss_dssp CCBCTTTCCBCTTCHHHHHHHHHH
T ss_pred CceeCCCCchhhcccHHHHHHHHH
Confidence 4449999999998 8999999865
No 365
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=42.14 E-value=74 Score=21.16 Aligned_cols=50 Identities=16% Similarity=0.240 Sum_probs=32.2
Q ss_pred chHHhhhhcEEEEEe-------------ecceEEEEeCCCchHHHHHHHHHc--CccEEEEecCCch
Q 037201 107 FADELKRAWFCVRNV-------------RFGCLMVVSDDSNFVEVFQEATLR--CLKMVVVGDMSDG 158 (177)
Q Consensus 107 La~eLrRAGv~Vr~V-------------~v~clvLVSDdsdf~~~lr~Ar~r--~l~TVVVGd~~~~ 158 (177)
|...|...|+.|.++ ..|.++ . .+.+-.++++..++. .+..|++++..+.
T Consensus 34 l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlvi-~-~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~ 98 (137)
T 2pln_A 34 IEKGLNVKGFMADVTESLEDGEYLMDIRNYDLVM-V-SDKNALSFVSRIKEKHSSIVVLVSSDNPTS 98 (137)
T ss_dssp HHHHHHHTTCEEEEESCHHHHHHHHHHSCCSEEE-E-CSTTHHHHHHHHHHHSTTSEEEEEESSCCH
T ss_pred HHHHHHHcCcEEEEeCCHHHHHHHHHcCCCCEEE-E-cCccHHHHHHHHHhcCCCccEEEEeCCCCH
Confidence 455666677777766 466666 3 344445677777764 7788888876543
No 366
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=41.94 E-value=21 Score=33.82 Aligned_cols=62 Identities=13% Similarity=0.050 Sum_probs=43.0
Q ss_pred HHhhhhcEEEEEe---------------ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC-Cchhhhhhhccccch
Q 037201 109 DELKRAWFCVRNV---------------RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM-SDGALKRIANAFFSW 170 (177)
Q Consensus 109 ~eLrRAGv~Vr~V---------------~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~-~~~~L~r~Ad~~~sW 170 (177)
.+|+++|+.|-.+ |++-+..-....+-..+++.-++.+-.+..|||+ +|-.--+.||+.+.-
T Consensus 564 ~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAm 641 (736)
T 3rfu_A 564 LELQQSGIEIVMLTGDSKRTAEAVAGTLGIKKVVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAM 641 (736)
T ss_dssp HHHHHHTCEEEEECSSCHHHHHHHHHHHTCCCEECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEE
T ss_pred HHHHHCCCeEEEECCCCHHHHHHHHHHcCCCEEEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEe
Confidence 4678889887766 6654443333455677888888889899999995 444555677876643
No 367
>2b2x_A Integrin alpha-1; computational design, antibody-antigen complex, immune syste; 2.20A {Rattus norvegicus} SCOP: c.62.1.1
Probab=41.43 E-value=28 Score=26.49 Aligned_cols=32 Identities=13% Similarity=0.290 Sum_probs=22.8
Q ss_pred ceEEEEeCCC-----chHHHHHHHHHcCccEEEEecC
Q 037201 124 GCLMVVSDDS-----NFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 124 ~clvLVSDds-----df~~~lr~Ar~r~l~TVVVGd~ 155 (177)
..|||+||-. +..++.+.+++.|+...+||-+
T Consensus 126 ~~iillTDG~~~~~~~~~~~~~~~~~~gi~v~~igvG 162 (223)
T 2b2x_A 126 KVMVIVTDGESHDNYRLKQVIQDCEDENIQRFSIAIL 162 (223)
T ss_dssp EEEEEEESSCCTTGGGHHHHHHHHHTTTEEEEEEEEC
T ss_pred eEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEec
Confidence 4588888843 3567788888889877666643
No 368
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=40.46 E-value=38 Score=26.36 Aligned_cols=60 Identities=13% Similarity=-0.038 Sum_probs=32.5
Q ss_pred chHHhhhhcEEEEEe---------------ecceEEEEeCCCchHHHHHHHH-HcC---ccEEEEecCC-chhhhhhhcc
Q 037201 107 FADELKRAWFCVRNV---------------RFGCLMVVSDDSNFVEVFQEAT-LRC---LKMVVVGDMS-DGALKRIANA 166 (177)
Q Consensus 107 La~eLrRAGv~Vr~V---------------~v~clvLVSDdsdf~~~lr~Ar-~r~---l~TVVVGd~~-~~~L~r~Ad~ 166 (177)
+-.+|+++|+.+-.+ |++.++-.. .+=.++++.+. +.| -.+++|||+. |-...+.|++
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~~~--k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~ 161 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQGQ--SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGL 161 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEECSC--SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSE
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhccc--CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCC
Confidence 446777777766655 444333222 22245555544 334 4688899853 3345556655
Q ss_pred cc
Q 037201 167 FF 168 (177)
Q Consensus 167 ~~ 168 (177)
.+
T Consensus 162 ~~ 163 (211)
T 3ij5_A 162 SV 163 (211)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 369
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=39.91 E-value=31 Score=24.42 Aligned_cols=27 Identities=7% Similarity=0.095 Sum_probs=19.6
Q ss_pred hhhcCCCcCChhHHHHHHHhhhhhhhh
Q 037201 49 LIRNQGRFYNNDKLVNHFRQIHEGEQK 75 (177)
Q Consensus 49 c~~CGrrf~t~~~L~kHFkqlHerEr~ 75 (177)
|..||..+.+.+....-.+.+-+-.++
T Consensus 39 C~~CGE~~~d~e~~~~~~~~~~e~~r~ 65 (133)
T 3o9x_A 39 CVHCEESIMNKEESDAFMAQVKAFRAS 65 (133)
T ss_dssp ESSSSCEECCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEeecHHHHHHHHHHHHHHHHH
Confidence 999999999988776665555544333
No 370
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=39.49 E-value=26 Score=26.94 Aligned_cols=33 Identities=6% Similarity=-0.108 Sum_probs=16.4
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|.|++.+.+.+ .+.++.+.+.++..|+++..
T Consensus 65 ~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~~~~~ 97 (290)
T 3clk_A 65 PVMGILLLSIALT-DDNLQLLQSSDVPYCFLSMG 97 (290)
T ss_dssp CCSEEEEESCC-----CHHHHHCC--CEEEESCC
T ss_pred CCCEEEEecccCC-HHHHHHHHhCCCCEEEEcCC
Confidence 5666666654322 24555566667777777653
No 371
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=39.46 E-value=15 Score=26.43 Aligned_cols=30 Identities=20% Similarity=0.307 Sum_probs=24.3
Q ss_pred eCCCchHHHHHHHHHcCccEEEEe-----cCCchh
Q 037201 130 SDDSNFVEVFQEATLRCLKMVVVG-----DMSDGA 159 (177)
Q Consensus 130 SDdsdf~~~lr~Ar~r~l~TVVVG-----d~~~~~ 159 (177)
+.+.++..+.+..++.++..+||| |++.+.
T Consensus 35 ~~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~ 69 (98)
T 1iv0_A 35 TLEEDVEALLDFVRREGLGKLVVGLPLRTDLKESA 69 (98)
T ss_dssp CHHHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCC
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEeeccCCCCCcCH
Confidence 335678889999999999999999 776554
No 372
>3saj_A Glutamate receptor 1; rossman fold, ION channel, membrane, transport protein; HET: NAG BMA MAN; 2.50A {Rattus norvegicus}
Probab=39.44 E-value=55 Score=26.52 Aligned_cols=27 Identities=4% Similarity=0.005 Sum_probs=25.0
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCcc
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLK 148 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~ 148 (177)
+.|.+++.+...+...+++.|++.|+.
T Consensus 182 ~~~vii~~~~~~~~~~~~~qa~~~g~~ 208 (384)
T 3saj_A 182 KERLVVVDCESERLNAILGQIVKLEKN 208 (384)
T ss_dssp SEEEEEEECCGGGHHHHHHHHHHTCCT
T ss_pred CCcEEEEEcCHHHHHHHHHHHHHcCCC
Confidence 788899999999999999999999986
No 373
>3eaf_A ABC transporter, substrate binding protein; PSI2, NYSGXRC, substrate binding P structural genomics, protein structure initiative; 2.00A {Aeropyrum pernix}
Probab=39.43 E-value=24 Score=28.53 Aligned_cols=34 Identities=6% Similarity=-0.088 Sum_probs=28.5
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
+.|.|++.+|..+...+++.+++.|++.-++|..
T Consensus 199 ~~dav~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 232 (391)
T 3eaf_A 199 DPDYVWCGNTISSCSLLGRAMAKVGLDAFLLTNV 232 (391)
T ss_dssp CCSEEEECSCHHHHHHHHHHHHHHTCCCEEEECG
T ss_pred CCCEEEEecCcHHHHHHHHHHHHCCCCceEEEec
Confidence 5788888888789999999999999987777754
No 374
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=39.18 E-value=40 Score=24.97 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=25.5
Q ss_pred cceEEEEeCCC----chHHHHHHHHHcCccEEEEecCC
Q 037201 123 FGCLMVVSDDS----NFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 123 v~clvLVSDds----df~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
...|||+||-. +..++++.++..|+...+||-+.
T Consensus 112 ~~~ivllTDG~~~~~~~~~~~~~~~~~~i~v~~igig~ 149 (218)
T 3ibs_A 112 GRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGM 149 (218)
T ss_dssp CEEEEEEECCTTCCSCHHHHHHHHHTTTEEEEEEEESC
T ss_pred CcEEEEEcCCCCCCCcHHHHHHHHHhcCCEEEEEEecC
Confidence 34788999854 37888999999988777666543
No 375
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=38.19 E-value=13 Score=28.49 Aligned_cols=50 Identities=14% Similarity=0.264 Sum_probs=32.4
Q ss_pred CchHHhhhhcEEEEEe-------------------ecceEEEEeCCCchHHHHHHHHHcCccEEEEecCC
Q 037201 106 GFADELKRAWFCVRNV-------------------RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V-------------------~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
|+..++++.|+.+... ++|.||+.+.+.+-..++ .+.+.++..|+++...
T Consensus 33 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~-~~~~~~iPvV~~~~~~ 101 (289)
T 3g85_A 33 GLQSKLAKQNYNYNVVICPYKTDCLHLEKGISKENSFDAAIIANISNYDLEYL-NKASLTLPIILFNRLS 101 (289)
T ss_dssp HHHHHHHHTTTCSEEEEEEECTTCGGGCGGGSTTTCCSEEEESSCCHHHHHHH-HHCCCSSCEEEESCCC
T ss_pred HHHHHHHHcCCeEEEEecCCCchhHHHHHHHHhccCCCEEEEecCCcccHHHH-HhccCCCCEEEECCCC
Confidence 4555666666655443 788888887654433333 3446889999998653
No 376
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=37.92 E-value=29 Score=26.43 Aligned_cols=38 Identities=24% Similarity=0.337 Sum_probs=25.0
Q ss_pred ceEEEEeCCCchHHHHHHHHHcCccEEEEecCCchhhhhhhcccc
Q 037201 124 GCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMSDGALKRIANAFF 168 (177)
Q Consensus 124 ~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~ 168 (177)
+|| .|- |+. .| ++-|+..|++||.|++.. .+. .||..+
T Consensus 189 e~l-~VG-Ds~-~D-i~aA~~aG~~~i~v~~~~--~~~-~ad~vi 226 (250)
T 4gib_A 189 NCI-GIE-DAS-AG-IDAINSANMFSVGVGNYE--NLK-KANLVV 226 (250)
T ss_dssp GEE-EEE-SSH-HH-HHHHHHTTCEEEEESCTT--TTT-TSSEEE
T ss_pred HeE-EEC-CCH-HH-HHHHHHcCCEEEEECChh--Hhc-cCCEEE
Confidence 444 344 553 45 688999999999998864 333 466543
No 377
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=37.31 E-value=93 Score=21.15 Aligned_cols=59 Identities=17% Similarity=0.109 Sum_probs=41.5
Q ss_pred HHhhhhcEEEEEe---------ecceEEEEeCCCc---hHHHHHHHHHcCccEEEEecCCchhhhhhhccccc
Q 037201 109 DELKRAWFCVRNV---------RFGCLMVVSDDSN---FVEVFQEATLRCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 109 ~eLrRAGv~Vr~V---------~v~clvLVSDdsd---f~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
+.++|||=.+.=. |---||+++.|.+ ...+...+.+.++.-+.+++. ..|++..-..++
T Consensus 4 ~~~~kagk~~~G~~~v~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~sk--~eLG~a~Gk~~~ 74 (82)
T 3v7e_A 4 DKVSQAKSIIIGTKQTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESM--KKLGKACGIEVG 74 (82)
T ss_dssp HHHHHCSEEEESHHHHHHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCH--HHHHHHHTCSSC
T ss_pred HHHHHcCCeeEcHHHHHHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCH--HHHHHHhCCCCC
Confidence 4577888655433 5556777777766 445666788999999999965 588887655443
No 378
>2e4u_A Metabotropic glutamate receptor 3; G-protein-coupled receptor, neuron, central nerve system, SI protein; HET: NAG GLU; 2.35A {Rattus norvegicus} PDB: 2e4v_A* 2e4w_A* 2e4x_A* 2e4y_A*
Probab=37.19 E-value=32 Score=29.96 Aligned_cols=32 Identities=9% Similarity=0.043 Sum_probs=26.8
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEe
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVG 153 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVG 153 (177)
+.+.||+.++..+...+++.|++.|++.+.||
T Consensus 244 ~a~vIi~~~~~~~~~~~~~~~~~~g~~~~~i~ 275 (555)
T 2e4u_A 244 NARVVVLFMRSDDSRELIAAANRVNASFTWVA 275 (555)
T ss_dssp TCCEEEEECCHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCCEEEEEcCHHHHHHHHHHHHHhcCCeEEEE
Confidence 56788888888889999999999888777665
No 379
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=36.83 E-value=64 Score=26.42 Aligned_cols=50 Identities=12% Similarity=0.136 Sum_probs=37.5
Q ss_pred CCCCchHHhhhhcEEEEEe-------ecceEEEEeCCCchHHHHHHHHH-cCccEEEEec
Q 037201 103 VGYGFADELKRAWFCVRNV-------RFGCLMVVSDDSNFVEVFQEATL-RCLKMVVVGD 154 (177)
Q Consensus 103 vgygLa~eLrRAGv~Vr~V-------~v~clvLVSDdsdf~~~lr~Ar~-r~l~TVVVGd 154 (177)
+|..||..|+++|+.|..+ +.| ++-|.|+ .+.++++.... -.-+++||-.
T Consensus 17 ~G~sLA~~L~~~G~~V~~~~~~~~~~~aD-ilavP~~-ai~~vl~~l~~~l~~g~ivvd~ 74 (232)
T 3dfu_A 17 STVNMAEKLDSVGHYVTVLHAPEDIRDFE-LVVIDAH-GVEGYVEKLSAFARRGQMFLHT 74 (232)
T ss_dssp CCSCHHHHHHHTTCEEEECSSGGGGGGCS-EEEECSS-CHHHHHHHHHTTCCTTCEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEecCHHHhccCC-EEEEcHH-HHHHHHHHHHHhcCCCCEEEEE
Confidence 4778999999999988875 567 7777777 88999876654 2345677654
No 380
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=36.70 E-value=15 Score=27.14 Aligned_cols=35 Identities=9% Similarity=-0.110 Sum_probs=27.4
Q ss_pred hhhhhhhhcCCCcCChhHHHHHHHhhhhhhhhhhhhhh
Q 037201 44 KENCLLIRNQGRFYNNDKLVNHFRQIHEGEQKKRSNQI 81 (177)
Q Consensus 44 er~~Lc~~CGrrf~t~~~L~kHFkqlHerEr~Krl~ri 81 (177)
.+.+.|..|+..|.+...|..|+.. +-|+|++.++
T Consensus 91 ~~~~~C~~C~~~f~s~~~~~~H~~g---k~H~~~~~~~ 125 (127)
T 1zu1_A 91 DRSKCCPVCNMTFSSPVVAESHYIG---KTHIKNLRLR 125 (127)
T ss_dssp CTTTEETTTTEECSSHHHHHHHHTS---HHHHHHHHHH
T ss_pred CCCeEcCCCCCEeCCHHHHHHHHCC---HHHHHHHHHh
Confidence 4567799999999999999999986 4455555544
No 381
>3n2n_F Anthrax toxin receptor 1; rossmann fold; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=36.39 E-value=37 Score=24.39 Aligned_cols=42 Identities=19% Similarity=0.255 Sum_probs=28.1
Q ss_pred ceEEEEeCCCch-------HHHHHHHHHcCccEEEEe--cCCchhhhhhhc
Q 037201 124 GCLMVVSDDSNF-------VEVFQEATLRCLKMVVVG--DMSDGALKRIAN 165 (177)
Q Consensus 124 ~clvLVSDdsdf-------~~~lr~Ar~r~l~TVVVG--d~~~~~L~r~Ad 165 (177)
..|||+||-.+- ....+.+++.|+...+|| |.+...|.+.|+
T Consensus 108 ~~iillTDG~~~~~~~~~~~~~~~~~~~~gi~i~~igvg~~~~~~L~~iA~ 158 (185)
T 3n2n_F 108 SVIIALTDGELHEDLFFYSEREANRSRDLGAIVYAVGVKDFNETQLARIAD 158 (185)
T ss_dssp EEEEEEECCCCCHHHHHHHHHHHHHHHHTTEEEEEEECSSCCHHHHTTTSS
T ss_pred cEEEEEcCCCCCCCcccchHHHHHHHHHCCCEEEEEEeccCCHHHHHHHhC
Confidence 468899986542 356777888888765555 544456776664
No 382
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=36.21 E-value=79 Score=24.26 Aligned_cols=49 Identities=20% Similarity=0.125 Sum_probs=33.8
Q ss_pred chHHhhhhcEEEEEe----------------ecceEEEEeC----CCchHHHHHHHHHcCc---cEEEEecC
Q 037201 107 FADELKRAWFCVRNV----------------RFGCLMVVSD----DSNFVEVFQEATLRCL---KMVVVGDM 155 (177)
Q Consensus 107 La~eLrRAGv~Vr~V----------------~v~clvLVSD----dsdf~~~lr~Ar~r~l---~TVVVGd~ 155 (177)
++..|+.+|+.|... +.|.++|-+- -..+..+++..+++++ -.|+||..
T Consensus 108 va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~~~v~vGG~ 179 (210)
T 1y80_A 108 VAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDALIAAGLRDRVKVIVGGA 179 (210)
T ss_dssp HHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEEECCSGGGTHHHHHHHHHHHHTTCGGGCEEEEEST
T ss_pred HHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEECC
Confidence 467789999999976 6666665442 2246777788888775 35777764
No 383
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=35.71 E-value=26 Score=23.02 Aligned_cols=34 Identities=6% Similarity=-0.083 Sum_probs=23.2
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|.++..........+++.+.+.|++.+.+++.
T Consensus 69 ~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 102 (118)
T 3ic5_A 69 GFDAVISAAPFFLTPIIAKAAKAAGAHYFDLTED 102 (118)
T ss_dssp TCSEEEECSCGGGHHHHHHHHHHTTCEEECCCSC
T ss_pred CCCEEEECCCchhhHHHHHHHHHhCCCEEEecCc
Confidence 5666666655555567778888888887776654
No 384
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=35.59 E-value=62 Score=23.37 Aligned_cols=30 Identities=13% Similarity=0.161 Sum_probs=23.4
Q ss_pred CchHHHHHHHHHcCccEEEEecCCchhhhh
Q 037201 133 SNFVEVFQEATLRCLKMVVVGDMSDGALKR 162 (177)
Q Consensus 133 sdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r 162 (177)
+--..+++.|++.+...||+|-...+.+.+
T Consensus 106 ~~~~~I~~~a~~~~~DLIV~G~~g~~~~~~ 135 (163)
T 1tq8_A 106 APVDALVNLADEEKADLLVVGNVGLSTIAG 135 (163)
T ss_dssp SHHHHHHHHHHHTTCSEEEEECCCCCSHHH
T ss_pred CHHHHHHHHHHhcCCCEEEECCCCCCcccc
Confidence 346789999999999999999875444443
No 385
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=35.48 E-value=54 Score=25.84 Aligned_cols=24 Identities=21% Similarity=0.059 Sum_probs=10.8
Q ss_pred ccEEEEecCC-chhhhhhhccccch
Q 037201 147 LKMVVVGDMS-DGALKRIANAFFSW 170 (177)
Q Consensus 147 l~TVVVGd~~-~~~L~r~Ad~~~sW 170 (177)
-.+++|||+. |-...+.|++.+.|
T Consensus 225 ~~~~~vGDs~~Di~~a~~ag~~v~~ 249 (287)
T 3a1c_A 225 EVVAFVGDGINDAPALAQADLGIAV 249 (287)
T ss_dssp CCEEEEECTTTCHHHHHHSSEEEEE
T ss_pred CeEEEEECCHHHHHHHHHCCeeEEe
Confidence 3455566532 22334445444433
No 386
>1q16_A Respiratory nitrate reductase 1 alpha chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 3ir7_A* 1y5i_A* 1siw_A* 1y4z_A* 1r27_A* 1y5l_A* 1y5n_A* 3ir6_A* 3ir5_A* 3egw_A*
Probab=35.16 E-value=34 Score=34.74 Aligned_cols=47 Identities=11% Similarity=0.186 Sum_probs=35.3
Q ss_pred ecceEEEEeCCC-----chHHHHHHHHHcCccEEEEecCCchhhhhhhccccc
Q 037201 122 RFGCLMVVSDDS-----NFVEVFQEATLRCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 122 ~v~clvLVSDds-----df~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
..|+||++--+. -....|..|+++|.+.|||.=. .......||.|++
T Consensus 246 ~ad~iv~wGsN~~~t~~~~~~~l~~ar~~G~KvVvIDPr-~t~ta~~AD~wl~ 297 (1247)
T 1q16_A 246 NSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPD-YAEIAKLCDLWLA 297 (1247)
T ss_dssp GCSEEEEESCCHHHHSGGGHHHHHHHGGGTCEEEEECSS-CCHHHHHSSEEEC
T ss_pred hCCEEEEECCCchhccHHHHHHHHHHHHCCCEEEEEeCC-CCcchhhCCeEEe
Confidence 467888887653 2335688899999999999754 2467889999986
No 387
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=35.03 E-value=29 Score=29.10 Aligned_cols=33 Identities=18% Similarity=0.299 Sum_probs=28.0
Q ss_pred eEEEEeCCCchHHHHHHHHHcCccEEEEecCCc
Q 037201 125 CLMVVSDDSNFVEVFQEATLRCLKMVVVGDMSD 157 (177)
Q Consensus 125 clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~~ 157 (177)
-|++++-.....-+++.|++.|+++|+|-+..+
T Consensus 7 ~l~Il~~~~~~~~i~~aa~~lG~~vv~v~~~~~ 39 (425)
T 3vot_A 7 NLAIICQNKHLPFIFEEAERLGLKVTFFYNSAE 39 (425)
T ss_dssp EEEEECCCTTCCHHHHHHHHTTCEEEEEEETTS
T ss_pred EEEEECCChhHHHHHHHHHHCCCEEEEEECCCc
Confidence 477888888888999999999999999976543
No 388
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=34.90 E-value=47 Score=23.42 Aligned_cols=8 Identities=25% Similarity=0.563 Sum_probs=4.7
Q ss_pred cEEEEecC
Q 037201 148 KMVVVGDM 155 (177)
Q Consensus 148 ~TVVVGd~ 155 (177)
.+++|||+
T Consensus 97 ~~~~vGD~ 104 (164)
T 3e8m_A 97 QVAYIGDD 104 (164)
T ss_dssp GEEEECCS
T ss_pred HEEEECCC
Confidence 46666664
No 389
>2ivf_A Ethylbenzene dehydrogenase alpha-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=34.57 E-value=44 Score=32.13 Aligned_cols=47 Identities=11% Similarity=0.127 Sum_probs=34.8
Q ss_pred ecceEEEEeCC-----CchHHHHHHHHHcCccEEEEecCCchhhhhhhccccc
Q 037201 122 RFGCLMVVSDD-----SNFVEVFQEATLRCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 122 ~v~clvLVSDd-----sdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
..|+||++--| ......|.+|+++|.+.|||.=.- ......||.|++
T Consensus 246 nad~Il~~G~N~~~~~p~~~~~~~~ar~~GakvivVDPr~-t~ta~~AD~wl~ 297 (976)
T 2ivf_A 246 DAELIFMTCSNWSYTYPSSYHFLSEARYKGAEVVVIAPDF-NPTTPAADLHVP 297 (976)
T ss_dssp GCSEEEEESCCHHHHCTTTHHHHHHHHHHTCEEEEECSSC-CTTGGGCSEEEC
T ss_pred hCcEEEEeCCChhHcccHHHHHHHHHHHcCCEEEEECCCC-CcchhhcCeEec
Confidence 56788888544 234567889999999999996542 456789999985
No 390
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=33.90 E-value=79 Score=26.02 Aligned_cols=32 Identities=19% Similarity=0.285 Sum_probs=20.5
Q ss_pred HHHHHHcCc---cEEEEecCC-chhhhhhhccccch
Q 037201 139 FQEATLRCL---KMVVVGDMS-DGALKRIANAFFSW 170 (177)
Q Consensus 139 lr~Ar~r~l---~TVVVGd~~-~~~L~r~Ad~~~sW 170 (177)
.+.+++.|+ .+++|||+. |-...+.|++.+-|
T Consensus 252 ~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~ 287 (317)
T 4eze_A 252 VDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW 287 (317)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe
Confidence 333445665 699999964 33556677766665
No 391
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=33.87 E-value=7 Score=30.37 Aligned_cols=31 Identities=16% Similarity=0.118 Sum_probs=15.9
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEec
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGD 154 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd 154 (177)
++|.||+.+-+.+- .++.+.+.++..|+++.
T Consensus 70 ~vdGiIi~~~~~~~--~~~~~~~~~iPvV~~~~ 100 (301)
T 3miz_A 70 RIDGVLYVTMYRRI--VDPESGDVSIPTVMINC 100 (301)
T ss_dssp TCSEEEEEEEEEEE--CCCCCTTCCCCEEEEEE
T ss_pred CCCEEEEecCCccH--HHHHHHhCCCCEEEECC
Confidence 55655555433221 44455556666666654
No 392
>2nap_A Protein (periplasmic nitrate reductase); nitrogenous acceptor, dissimilatory nitrate reductase; HET: MGD MES; 1.90A {Desulfovibrio desulfuricans} SCOP: b.52.2.2 c.81.1.1 PDB: 2jim_A* 2jir_A* 2jip_A* 2v45_A* 2v3v_A* 2jiq_A* 2jio_A*
Probab=33.21 E-value=41 Score=30.62 Aligned_cols=47 Identities=13% Similarity=0.278 Sum_probs=35.4
Q ss_pred ecceEEEEeCC-----CchHHHHHHHHHc--CccEEEEecCCchhhhhhhccccc
Q 037201 122 RFGCLMVVSDD-----SNFVEVFQEATLR--CLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 122 ~v~clvLVSDd-----sdf~~~lr~Ar~r--~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
..|+|+++--| ..+..-|+.|+++ |.+.|||.=.- ......||.|++
T Consensus 166 ~ad~il~~G~n~~~~~p~~~~~~~~a~~~~~g~klividP~~-t~ta~~Ad~~l~ 219 (723)
T 2nap_A 166 QATCFFIIGSNTSEAHPVLFRRIARRKQVEPGVKIIVADPRR-TNTSRIADMHVA 219 (723)
T ss_dssp TCSEEEEESCCHHHHSHHHHHHHHHHHHHCTTCEEEEECSBC-CGGGGGCSEEEC
T ss_pred HCCEEEEEcCChhHhCcHHHHHHHHHHhhCCCCEEEEEcCcC-CchhhhhCeeee
Confidence 66788887655 3345567889988 99999997653 567889999886
No 393
>3tbf_A Glucosamine--fructose-6-phosphate aminotransferas [isomerizing]; structural genomics; 2.28A {Francisella tularensis subsp}
Probab=33.17 E-value=42 Score=28.58 Aligned_cols=35 Identities=23% Similarity=0.259 Sum_probs=28.2
Q ss_pred ecceEEEEeCCCchHH---HHHHHHHcCccEEEEecCC
Q 037201 122 RFGCLMVVSDDSNFVE---VFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~---~lr~Ar~r~l~TVVVGd~~ 156 (177)
+...++++++|..+.. .+++.+.+|-+.++|+|..
T Consensus 276 ~~pvi~~~~~d~~~~k~~~~~~e~~~rg~~vi~i~~~~ 313 (372)
T 3tbf_A 276 NMPIVAVVPNDELLDKTLSNLQEVHARGGKLILFVDKA 313 (372)
T ss_dssp TCEEEEEECSSTTHHHHHHHHHHHHHTTCEEEEEEEGG
T ss_pred CCeEEEEecCCchHHHHHHHHHHHHHcCCeEEEEECCC
Confidence 6777889999988875 4666777899999999864
No 394
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=32.97 E-value=56 Score=25.01 Aligned_cols=42 Identities=5% Similarity=0.129 Sum_probs=31.1
Q ss_pred chHHhhhhcEEEEEeecceEEEEeC-CCchHHHHHHHHHcCc-cEEEEecC
Q 037201 107 FADELKRAWFCVRNVRFGCLMVVSD-DSNFVEVFQEATLRCL-KMVVVGDM 155 (177)
Q Consensus 107 La~eLrRAGv~Vr~V~v~clvLVSD-dsdf~~~lr~Ar~r~l-~TVVVGd~ 155 (177)
++..|+.+|+.|.. ..+. +.-.+..||+|...++ =.+||||.
T Consensus 27 V~~~L~~~GiRvev-------D~~r~~e~Lg~kIR~a~~~kvPy~lVVG~k 70 (130)
T 1v95_A 27 VGRKVRDLGMVVDL-------IFLNTEVSLSQALEDVSRGGSPFAIVITQQ 70 (130)
T ss_dssp HHHHHHTTTCCEEE-------EECTTSSCHHHHHHHHHHHTCSEEEEECHH
T ss_pred HHHHHHHCCCEEEE-------ecCCCCCcHHHHHHHHHHcCCCEEEEEech
Confidence 47889999877653 2332 6889999999997554 56788885
No 395
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=32.92 E-value=32 Score=28.41 Aligned_cols=30 Identities=7% Similarity=-0.043 Sum_probs=25.1
Q ss_pred EeCC-C--chHHHHHHHHHcCccEEEEecCCch
Q 037201 129 VSDD-S--NFVEVFQEATLRCLKMVVVGDMSDG 158 (177)
Q Consensus 129 VSDd-s--df~~~lr~Ar~r~l~TVVVGd~~~~ 158 (177)
-||+ + .+.+|++.|.++|++.+++-|-...
T Consensus 11 ~s~~~~~~~~~e~~~~A~~~G~~~i~~TdH~~~ 43 (283)
T 3dcp_A 11 FCPHGTHDDVEEMVLKAIELDFDEYSIVEHAPL 43 (283)
T ss_dssp TCTTSCCCCHHHHHHHHHHTTCCEEEEEEECCC
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCEEEEecCCCC
Confidence 3675 4 5899999999999999999997544
No 396
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=32.77 E-value=12 Score=27.83 Aligned_cols=30 Identities=17% Similarity=0.100 Sum_probs=13.4
Q ss_pred cceEEEEeCCCchHHHHHHHHHcCccEEEE
Q 037201 123 FGCLMVVSDDSNFVEVFQEATLRCLKMVVV 152 (177)
Q Consensus 123 v~clvLVSDdsdf~~~lr~Ar~r~l~TVVV 152 (177)
+|.+++.--+..-.++++.+-+.|++.|++
T Consensus 71 vDlavi~vp~~~~~~v~~~~~~~gi~~i~~ 100 (140)
T 1iuk_A 71 VDILDVFRPPSALMDHLPEVLALRPGLVWL 100 (140)
T ss_dssp CSEEEECSCHHHHTTTHHHHHHHCCSCEEE
T ss_pred CCEEEEEeCHHHHHHHHHHHHHcCCCEEEE
Confidence 444333333333344455555555554444
No 397
>3h5l_A Putative branched-chain amino acid ABC transporter; structural genomics, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi}
Probab=32.66 E-value=46 Score=27.08 Aligned_cols=33 Identities=6% Similarity=-0.114 Sum_probs=21.5
Q ss_pred ecceEEEEeCC-CchHHHHHHHHHcCccEEEEec
Q 037201 122 RFGCLMVVSDD-SNFVEVFQEATLRCLKMVVVGD 154 (177)
Q Consensus 122 ~v~clvLVSDd-sdf~~~lr~Ar~r~l~TVVVGd 154 (177)
+.|.|++.+.. .+...+++.+++.|+...++|.
T Consensus 219 ~~d~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 252 (419)
T 3h5l_A 219 PPAVIVVTHFYPQDQALFMNQFMTDPTNSLVYLQ 252 (419)
T ss_dssp CCSEEEECCCCHHHHHHHHHHHTTSCCSCEEEEC
T ss_pred CCCEEEEccccCchHHHHHHHHHHcCCCceEEec
Confidence 55666555443 4677777777777777666654
No 398
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=32.64 E-value=43 Score=29.18 Aligned_cols=32 Identities=9% Similarity=0.168 Sum_probs=25.5
Q ss_pred ecceEEEEeCC-----CchHHHHHHHHHcCccEEEEecCC
Q 037201 122 RFGCLMVVSDD-----SNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 122 ~v~clvLVSDd-----sdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
|+| |++|. ++|.++++.||+.|++.++=.+..
T Consensus 184 G~d---L~g~E~~~p~~~f~~~f~~ar~~Gl~~t~HAGE~ 220 (380)
T 4gxw_A 184 GIG---IDYRENDRPPELFWKAYRDARAAGFRTTAHAGEF 220 (380)
T ss_dssp EEE---EESCCTTCCGGGGHHHHHHHHHTTCEEEEEESCT
T ss_pred EEe---ecCCCCCCCHHHHHHHHHHHHHcCCCeeeecccc
Confidence 666 88874 569999999999999988755543
No 399
>1h0h_A Formate dehydrogenase (large subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: b.52.2.2 c.81.1.1
Probab=32.58 E-value=53 Score=31.62 Aligned_cols=47 Identities=4% Similarity=0.025 Sum_probs=34.8
Q ss_pred ecceEEEEeCC-----CchHHHHHHHHHcCccEEEEecCCchhhhhhhccccc
Q 037201 122 RFGCLMVVSDD-----SNFVEVFQEATLRCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 122 ~v~clvLVSDd-----sdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
..|+||++.-| ......+..|+++|.+.|||.=.- ......||.|++
T Consensus 184 ~ad~il~~G~N~~~~~p~~~~~~~~a~~~G~klivIDPr~-t~ta~~AD~~l~ 235 (977)
T 1h0h_A 184 NSDVILMMGSNPAENHPISFKWVMRAKDKGATLIHVDPRY-TRTSTKCDLYAP 235 (977)
T ss_dssp GCSEEEEESCCHHHHSTTHHHHHHHHHHTTCEEEEECSSC-CTTGGGCSEEEC
T ss_pred hCCEEEEECCChHHhCcHHHHHHHHHHHCCCeEEEECCCC-CchhHHhCeeec
Confidence 56788887654 234456788999999999997653 467889999875
No 400
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=32.49 E-value=55 Score=23.81 Aligned_cols=43 Identities=21% Similarity=0.222 Sum_probs=28.7
Q ss_pred ceEEEEeCC------CchHHHHHHHHHcCccEEEEecCC-------chhhhhhhcc
Q 037201 124 GCLMVVSDD------SNFVEVFQEATLRCLKMVVVGDMS-------DGALKRIANA 166 (177)
Q Consensus 124 ~clvLVSDd------sdf~~~lr~Ar~r~l~TVVVGd~~-------~~~L~r~Ad~ 166 (177)
..|||+||- .+..++++.+++.|+...+||-+. ...|...|..
T Consensus 112 ~~iillTDG~~~~~~~~~~~~~~~~~~~gi~i~~igvG~~~~~~~~~~~L~~iA~~ 167 (198)
T 1n3y_A 112 KILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASK 167 (198)
T ss_dssp EEEEEEESSCCBSCSSCHHHHHHHHHHTTCEEEEEEESGGGGSSTTHHHHHHHSCS
T ss_pred eEEEEECCCCCCCCcccHHHHHHHHHHCCCEEEEEEccccccccccHHHHHHHHcC
Confidence 357888873 345788999999998766665432 2466666653
No 401
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=32.43 E-value=77 Score=23.83 Aligned_cols=31 Identities=13% Similarity=-0.001 Sum_probs=15.6
Q ss_pred HHHHHHHHcCc---cEEEEecCC-chhhhhhhccc
Q 037201 137 EVFQEATLRCL---KMVVVGDMS-DGALKRIANAF 167 (177)
Q Consensus 137 ~~lr~Ar~r~l---~TVVVGd~~-~~~L~r~Ad~~ 167 (177)
.+.+.+++.|+ .++.|||+. |-...+.|.+.
T Consensus 87 ~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~ 121 (168)
T 3ewi_A 87 TVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLS 121 (168)
T ss_dssp HHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEE
T ss_pred HHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCE
Confidence 33334444554 578888853 33344444433
No 402
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=32.39 E-value=36 Score=24.50 Aligned_cols=44 Identities=11% Similarity=0.153 Sum_probs=29.1
Q ss_pred EEEEeCCCchHHHHHHHHHcCccEEEEecCCchhhhhhhcccc-chhhh
Q 037201 126 LMVVSDDSNFVEVFQEATLRCLKMVVVGDMSDGALKRIANAFF-SWSDL 173 (177)
Q Consensus 126 lvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~-sW~ev 173 (177)
.+.|-|. . .| +..|+..|+++|.|++.. ..++..||.-+ |++|+
T Consensus 147 ~i~iGD~-~-~D-i~~a~~aG~~~i~v~~~~-~~~~~~ad~v~~~~~el 191 (205)
T 3m9l_A 147 MVMVGDY-R-FD-LDCGRAAGTRTVLVNLPD-NPWPELTDWHARDCAQL 191 (205)
T ss_dssp EEEEESS-H-HH-HHHHHHHTCEEEECSSSS-CSCGGGCSEECSSHHHH
T ss_pred EEEECCC-H-HH-HHHHHHcCCEEEEEeCCC-CcccccCCEEeCCHHHH
Confidence 4455553 3 33 578888999999999875 56677777654 34443
No 403
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=32.34 E-value=59 Score=24.57 Aligned_cols=49 Identities=18% Similarity=0.082 Sum_probs=33.3
Q ss_pred chHHhhhhcEEEEEe----------------ecceEEEEeCCC----chHHHHHHHHHcCc--cEEEEecC
Q 037201 107 FADELKRAWFCVRNV----------------RFGCLMVVSDDS----NFVEVFQEATLRCL--KMVVVGDM 155 (177)
Q Consensus 107 La~eLrRAGv~Vr~V----------------~v~clvLVSDds----df~~~lr~Ar~r~l--~TVVVGd~ 155 (177)
++..|+.+|+.|... +.|.++|-|-.. .+.++++..++.|. -.|+||..
T Consensus 38 va~~l~~~G~eVi~lG~~~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~ 108 (161)
T 2yxb_A 38 VARALRDAGFEVVYTGLRQTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGT 108 (161)
T ss_dssp HHHHHHHTTCEEECCCSBCCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEEC
T ss_pred HHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCC
Confidence 356789999999866 667666665443 35566667777765 34777764
No 404
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=32.31 E-value=48 Score=22.59 Aligned_cols=29 Identities=21% Similarity=0.164 Sum_probs=22.8
Q ss_pred CchHHHHHHHHHcCccEEEEecCCchhhh
Q 037201 133 SNFVEVFQEATLRCLKMVVVGDMSDGALK 161 (177)
Q Consensus 133 sdf~~~lr~Ar~r~l~TVVVGd~~~~~L~ 161 (177)
+--..+++.|++.+...||+|-...+.+.
T Consensus 97 ~~~~~I~~~a~~~~~dliV~G~~~~~~~~ 125 (147)
T 3hgm_A 97 RPSRTIVRFARKRECDLVVIGAQGTNGDK 125 (147)
T ss_dssp CHHHHHHHHHHHTTCSEEEECSSCTTCCS
T ss_pred CHHHHHHHHHHHhCCCEEEEeCCCCcccc
Confidence 44678999999999999999987534433
No 405
>1atz_A VON willebrand factor; collagen-binding, hemostasis, dinucleotide binding fold; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 4dmu_B 2adf_A 1fe8_A 1ao3_A
Probab=32.30 E-value=50 Score=24.20 Aligned_cols=41 Identities=12% Similarity=0.172 Sum_probs=26.7
Q ss_pred EEEEeCCC---chHHHHHHHHHcCccEEEEecCC---chhhhhhhcc
Q 037201 126 LMVVSDDS---NFVEVFQEATLRCLKMVVVGDMS---DGALKRIANA 166 (177)
Q Consensus 126 lvLVSDds---df~~~lr~Ar~r~l~TVVVGd~~---~~~L~r~Ad~ 166 (177)
+|+++|+- +..+..+.+++.|+...+||-+. ...|...|..
T Consensus 112 vivltdg~~~~~~~~~~~~~~~~gi~v~~igvG~~~~~~~L~~iA~~ 158 (189)
T 1atz_A 112 VVILVTDVSVDSVDAAADAARSNRVTVFPIGIGDRYDAAQLRILAGP 158 (189)
T ss_dssp EEEEECSCCSSCCHHHHHHHHHTTEEEEEEEESSSSCHHHHHHHTGG
T ss_pred EEEEeCCCCCchHHHHHHHHHHCCCEEEEEEcCCcCCHHHHHHHHCC
Confidence 66666653 56788888899997766555432 2466666654
No 406
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=32.24 E-value=75 Score=23.76 Aligned_cols=13 Identities=23% Similarity=-0.003 Sum_probs=7.4
Q ss_pred HHhhhhcEEEEEe
Q 037201 109 DELKRAWFCVRNV 121 (177)
Q Consensus 109 ~eLrRAGv~Vr~V 121 (177)
.+|+..|+.+-.+
T Consensus 56 ~~L~~~g~~~~iv 68 (191)
T 3n1u_A 56 KLLMAAGIQVAII 68 (191)
T ss_dssp HHHHHTTCEEEEE
T ss_pred HHHHHCCCeEEEE
Confidence 4556666655555
No 407
>1v7p_C Integrin alpha-2; snake venom, C-type lectin, antagonist, cell adhes glycoprotein, toxin-cell adhesion complex; HET: NAG; 1.90A {Homo sapiens} SCOP: c.62.1.1 PDB: 1aox_A 1dzi_A
Probab=32.21 E-value=49 Score=24.54 Aligned_cols=31 Identities=13% Similarity=0.166 Sum_probs=22.5
Q ss_pred ceEEEEeCCC-----chHHHHHHHHHcCccEEEEec
Q 037201 124 GCLMVVSDDS-----NFVEVFQEATLRCLKMVVVGD 154 (177)
Q Consensus 124 ~clvLVSDds-----df~~~lr~Ar~r~l~TVVVGd 154 (177)
..|||+||-. +..++.+.+++.|+...+||-
T Consensus 110 ~~ivllTDG~~~~~~~~~~~~~~~~~~gi~i~~igv 145 (200)
T 1v7p_C 110 KVMVVVTDGESHDGSMLKAVIDQCNHDNILRFGIAV 145 (200)
T ss_dssp EEEEEEESSCCSCGGGHHHHHHHHHHTTEEEEEEEE
T ss_pred eEEEEEccCCCCCcccHHHHHHHHHHCCCEEEEEEe
Confidence 3588888743 245678888999988777765
No 408
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=32.16 E-value=96 Score=25.93 Aligned_cols=65 Identities=18% Similarity=0.155 Sum_probs=37.1
Q ss_pred CchHHhhhhcEEEEEe---------------ecceEEE-------------EeCCC----chHHHHHH-HHHcCc---cE
Q 037201 106 GFADELKRAWFCVRNV---------------RFGCLMV-------------VSDDS----NFVEVFQE-ATLRCL---KM 149 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V---------------~v~clvL-------------VSDds----df~~~lr~-Ar~r~l---~T 149 (177)
.+-.+|++.|+.+-.+ |++.++- ++++. .=.++++. +.+.|+ .+
T Consensus 263 e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~~~gi~~~~~ 342 (415)
T 3p96_A 263 TTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQRAGVPMAQT 342 (415)
T ss_dssp HHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHHHTCCGGGE
T ss_pred HHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHHHcCcChhhE
Confidence 3556788999987777 5553321 22221 11234444 445666 69
Q ss_pred EEEecCC-chhhhhhhccccch
Q 037201 150 VVVGDMS-DGALKRIANAFFSW 170 (177)
Q Consensus 150 VVVGd~~-~~~L~r~Ad~~~sW 170 (177)
+.|||+. |-...+.|.+.+-|
T Consensus 343 i~vGD~~~Di~~a~~aG~~va~ 364 (415)
T 3p96_A 343 VAVGDGANDIDMLAAAGLGIAF 364 (415)
T ss_dssp EEEECSGGGHHHHHHSSEEEEE
T ss_pred EEEECCHHHHHHHHHCCCeEEE
Confidence 9999974 23455666665554
No 409
>2cxx_A Probable GTP-binding protein ENGB; structural genomics, NPPSFA, national P protein structural and functional analyses; HET: GDP; 1.70A {Pyrococcus horikoshii} SCOP: c.37.1.8
Probab=32.04 E-value=54 Score=23.06 Aligned_cols=37 Identities=16% Similarity=0.134 Sum_probs=28.0
Q ss_pred ecceEEEEeCCCchHHH----------------HHHHHHcCccEEEEecCCch
Q 037201 122 RFGCLMVVSDDSNFVEV----------------FQEATLRCLKMVVVGDMSDG 158 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~----------------lr~Ar~r~l~TVVVGd~~~~ 158 (177)
+++.++.|.|.+.|..+ ++.....+...++||+-.|.
T Consensus 82 ~~~~v~~v~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~piilv~nK~Dl 134 (190)
T 2cxx_A 82 NIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFLRELDIPTIVAVNKLDK 134 (190)
T ss_dssp GCCEEEEEEETTHHHHHHHHHHHTTCCCHHHHHHHHHHHTTCCEEEEEECGGG
T ss_pred cCCEEEEEEcchhhhhHHHhhhccCccHHHHHHHHHHHhcCCceEEEeehHhc
Confidence 56788899999888654 34555678999999987643
No 410
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=31.64 E-value=58 Score=30.31 Aligned_cols=62 Identities=18% Similarity=0.105 Sum_probs=41.6
Q ss_pred HHhhhhcEEEEEe---------------ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC-Cchhhhhhhccccchh
Q 037201 109 DELKRAWFCVRNV---------------RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM-SDGALKRIANAFFSWS 171 (177)
Q Consensus 109 ~eLrRAGv~Vr~V---------------~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~-~~~~L~r~Ad~~~sW~ 171 (177)
.+|+++|+.|-.+ |++.++.=....+=..+++.-++. -.++.|||+ +|-..-+.||+.+...
T Consensus 545 ~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg 622 (723)
T 3j09_A 545 QELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG 622 (723)
T ss_dssp HHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECC
T ss_pred HHHHHCCCEEEEECCCCHHHHHHHHHHcCCcEEEccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeC
Confidence 4688889887766 666544333345666677776666 568889995 4555566788877653
No 411
>3odp_A Putative tagatose-6-phosphate ketose/aldose isome; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PG4; 2.35A {Clostridium novyi}
Probab=31.46 E-value=34 Score=29.67 Aligned_cols=46 Identities=13% Similarity=0.293 Sum_probs=33.8
Q ss_pred ecceEEEEeCCCc---h-HHHHHHHHHcC--ccEEEEecCCchhhhhhhccc
Q 037201 122 RFGCLMVVSDDSN---F-VEVFQEATLRC--LKMVVVGDMSDGALKRIANAF 167 (177)
Q Consensus 122 ~v~clvLVSDdsd---f-~~~lr~Ar~r~--l~TVVVGd~~~~~L~r~Ad~~ 167 (177)
+...++++|+|.. + .+++++.+.+| -+.++|+|..+..+...+|..
T Consensus 281 ~~pvi~~~~~d~~t~~~~~~~~~ev~arg~~~~vi~i~~~~~~~~~~~~~~~ 332 (393)
T 3odp_A 281 ETLIVIFFSNDTYAREYEYDLLKEVYSQNGNHKVLAISEYEDKLIEDNSDYF 332 (393)
T ss_dssp TEEEEEECCSSHHHHHHHHHHHHHHHHSSSCCEEEEEEEECCHHHHTTCSEE
T ss_pred CceEEEEEcCCchhhHHHHHHHHHHHhcCCCceEEEEEcCCcchhccCCcEE
Confidence 5666777888763 3 36889999988 899999987655666656655
No 412
>4fe7_A Xylose operon regulatory protein; HTH_ARAC, helix-turn-helix, PBP, periplasmic binding protein binding transcription regulator, DNA xylose; HET: XYS; 2.90A {Escherichia coli} PDB: 4fe4_A
Probab=30.68 E-value=43 Score=27.78 Aligned_cols=31 Identities=19% Similarity=0.039 Sum_probs=24.2
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|.||+..++ .++++.+.+.|+..|+|+..
T Consensus 76 ~vDGiIi~~~~---~~~~~~l~~~~iPvV~i~~~ 106 (412)
T 4fe7_A 76 LGDGVIADFDD---KQIEQALADVDVPIVGVGGS 106 (412)
T ss_dssp CCSEEEEETTC---HHHHHHHTTCCSCEEEEEEC
T ss_pred CCCEEEEecCC---hHHHHHHhhCCCCEEEecCC
Confidence 78988884433 46788888899999999864
No 413
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=30.62 E-value=45 Score=23.50 Aligned_cols=36 Identities=8% Similarity=0.032 Sum_probs=27.3
Q ss_pred ecceEEEEeCCCc-----hHHHHHHHHHcCccEEEEecCCc
Q 037201 122 RFGCLMVVSDDSN-----FVEVFQEATLRCLKMVVVGDMSD 157 (177)
Q Consensus 122 ~v~clvLVSDdsd-----f~~~lr~Ar~r~l~TVVVGd~~~ 157 (177)
+++.+++|.|.++ +..+++...+.+...++||+-.|
T Consensus 104 ~~~~vi~v~d~~~~~~~~~~~~~~~~~~~~~p~i~v~nK~D 144 (195)
T 3pqc_A 104 SLQMVFLLVDGRIPPQDSDLMMVEWMKSLNIPFTIVLTKMD 144 (195)
T ss_dssp TEEEEEEEEETTSCCCHHHHHHHHHHHHTTCCEEEEEECGG
T ss_pred CceEEEEEecCCCCCCHHHHHHHHHHHHcCCCEEEEEEChh
Confidence 4578888888443 35667778888999999998764
No 414
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=30.59 E-value=1.3e+02 Score=20.48 Aligned_cols=52 Identities=19% Similarity=0.217 Sum_probs=32.5
Q ss_pred CchHHhhhhcEEEEEe-------------ecceEEEEeC--CCchHHHHHHHHH--cCccEEEEecCCc
Q 037201 106 GFADELKRAWFCVRNV-------------RFGCLMVVSD--DSNFVEVFQEATL--RCLKMVVVGDMSD 157 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V-------------~v~clvLVSD--dsdf~~~lr~Ar~--r~l~TVVVGd~~~ 157 (177)
.|...|.+.|+.|.++ ..|.+++=.+ +.+=.++++..++ .++..|++++..+
T Consensus 18 ~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~~ 86 (155)
T 1qkk_A 18 AMQQTLELAGFTVSSFASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHGD 86 (155)
T ss_dssp HHHHHHHHTTCEEEEESCHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGGG
T ss_pred HHHHHHHHcCcEEEEECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 3566777788888766 4565544332 2233456777665 3678888887653
No 415
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=30.26 E-value=42 Score=23.37 Aligned_cols=44 Identities=25% Similarity=0.208 Sum_probs=26.0
Q ss_pred CCCchHHhhhhcEEEEEeecceEEEEeCCCchHHHHHHHHHcCccEEEEecCCchh
Q 037201 104 GYGFADELKRAWFCVRNVRFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMSDGA 159 (177)
Q Consensus 104 gygLa~eLrRAGv~Vr~V~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~~~~ 159 (177)
|..++..|.+.|+.|..+ ..| .+-++.+++.+. .++.||.++..
T Consensus 18 G~~la~~L~~~g~~V~~i--------d~~---~~~~~~~~~~~~-~~~~gd~~~~~ 61 (141)
T 3llv_A 18 GVGLVRELTAAGKKVLAV--------DKS---KEKIELLEDEGF-DAVIADPTDES 61 (141)
T ss_dssp HHHHHHHHHHTTCCEEEE--------ESC---HHHHHHHHHTTC-EEEECCTTCHH
T ss_pred HHHHHHHHHHCCCeEEEE--------ECC---HHHHHHHHHCCC-cEEECCCCCHH
Confidence 334788999998865433 122 234455555564 46678876543
No 416
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A*
Probab=30.08 E-value=73 Score=22.41 Aligned_cols=37 Identities=5% Similarity=-0.036 Sum_probs=27.7
Q ss_pred ecceEEEEeCCCchHHH---HHHHHHcCccEEEEecCCch
Q 037201 122 RFGCLMVVSDDSNFVEV---FQEATLRCLKMVVVGDMSDG 158 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~---lr~Ar~r~l~TVVVGd~~~~ 158 (177)
+.+.+++|-|-+++..+ +...++.+...++||+-.|-
T Consensus 81 ~~~~~i~v~D~~~~~~~~~~~~~~~~~~~p~ilv~nK~Dl 120 (165)
T 2wji_A 81 KPDLVVNIVDATALERNLYLTLQLMEMGANLLLALNKMDL 120 (165)
T ss_dssp CCSEEEEEEETTCHHHHHHHHHHHHHTTCCEEEEEECHHH
T ss_pred CCCEEEEEecCCchhHhHHHHHHHHhcCCCEEEEEEchHh
Confidence 56788899998887654 44455678999999987643
No 417
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=29.98 E-value=55 Score=22.94 Aligned_cols=45 Identities=22% Similarity=0.356 Sum_probs=30.2
Q ss_pred HhhhhcEEEEEeecceEEEEeCCCchHHHHHHHHHcCccEEEEecCCchhhh
Q 037201 110 ELKRAWFCVRNVRFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMSDGALK 161 (177)
Q Consensus 110 eLrRAGv~Vr~V~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~~~~L~ 161 (177)
.+...|+.+++. +. .. +--..+++.|++.+...||+|-...+.++
T Consensus 91 ~~~~~g~~~~~~-----v~-~G-~~~~~I~~~a~~~~~dlIV~G~~g~~~~~ 135 (162)
T 1mjh_A 91 ELEDVGFKVKDI-----IV-VG-IPHEEIVKIAEDEGVDIIIMGSHGKTNLK 135 (162)
T ss_dssp HHHHTTCEEEEE-----EE-EE-CHHHHHHHHHHHTTCSEEEEESCCSSCCT
T ss_pred HHHHcCCceEEE-----Ec-CC-CHHHHHHHHHHHcCCCEEEEcCCCCCCcc
Confidence 345567665442 22 32 35678899999999999999987444443
No 418
>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1
Probab=29.86 E-value=43 Score=26.66 Aligned_cols=37 Identities=16% Similarity=0.142 Sum_probs=22.5
Q ss_pred HHHHHHHHHcCccEEEEecCCchhhhhhhccccchhhh
Q 037201 136 VEVFQEATLRCLKMVVVGDMSDGALKRIANAFFSWSDL 173 (177)
Q Consensus 136 ~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~sW~ev 173 (177)
..+++.+++.|+...||=..+ ....=.|-+.+||+.+
T Consensus 102 ~~l~~~l~~~gi~vevIPGiS-s~~aa~a~~G~p~~~f 138 (242)
T 1wyz_A 102 ADVVAIAQRQKLKVIPLVGPS-SIILSVMASGFNGQSF 138 (242)
T ss_dssp HHHHHHHHHTTCCEEECCCCC-HHHHHHHHHTSCSSSE
T ss_pred HHHHHHHHHCCCCEEEeCcHH-HHHHHHHHcCCCCCeE
Confidence 456666667777776666554 4555555666665543
No 419
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=29.68 E-value=62 Score=23.12 Aligned_cols=45 Identities=13% Similarity=0.083 Sum_probs=28.2
Q ss_pred hhhhcEEEEEeecceEEEEeCCCchHHHHHHHHHcCccEEEEecCCchhhhh
Q 037201 111 LKRAWFCVRNVRFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMSDGALKR 162 (177)
Q Consensus 111 LrRAGv~Vr~V~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~~~~L~r 162 (177)
+...|+.+.+ .+ +.. .-...+++.|++.+...||+|-...+.+.+
T Consensus 96 ~~~~g~~~~~-----~v-~~G-~~~~~I~~~a~~~~~DLIVmG~~g~~~~~~ 140 (175)
T 2gm3_A 96 CHEIGVGCEA-----WI-KTG-DPKDVICQEVKRVRPDFLVVGSRGLGRFQK 140 (175)
T ss_dssp HHHHTCEEEE-----EE-EES-CHHHHHHHHHHHHCCSEEEEEECCCC----
T ss_pred HHHCCCceEE-----EE-ecC-CHHHHHHHHHHHhCCCEEEEeCCCCChhhh
Confidence 3445665433 22 333 347789999999999999999864444433
No 420
>4fj3_P RAF proto-oncogene serine/threonine-protein kinas; 14-3-3 fold, all alpha-helical, adapter protein, protein BIN transferase complex; HET: SEP; 1.95A {Homo sapiens}
Probab=29.58 E-value=16 Score=23.04 Aligned_cols=13 Identities=23% Similarity=0.450 Sum_probs=10.8
Q ss_pred hhccCCccccCCh
Q 037201 24 ANANSHAFGYVPQ 36 (177)
Q Consensus 24 AyAnrhaf~~lP~ 36 (177)
-|.++|+|+|.+.
T Consensus 3 RYStPhaf~~~tp 15 (36)
T 4fj3_P 3 RYSTPHAFTFNTS 15 (36)
T ss_pred cccCCccccccCC
Confidence 4899999999764
No 421
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens}
Probab=29.41 E-value=37 Score=29.05 Aligned_cols=43 Identities=12% Similarity=0.187 Sum_probs=28.8
Q ss_pred CchHHhhhhcEEEEEeecceEEEEeCCCchHHHHHHHHHcCccE-EEEecC
Q 037201 106 GFADELKRAWFCVRNVRFGCLMVVSDDSNFVEVFQEATLRCLKM-VVVGDM 155 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V~v~clvLVSDdsdf~~~lr~Ar~r~l~T-VVVGd~ 155 (177)
.++.+|+.+|+.|... ..++..+..-++.|...|... ||||+.
T Consensus 384 ~l~~~Lr~~Gi~ve~~-------~~~~~~l~~q~k~A~~~g~~~~viiG~~ 427 (464)
T 4g84_A 384 KLVSELWDAGIKAELL-------YKKNPKLLNQLQYCEEAGIPLVAIIGEQ 427 (464)
T ss_dssp HHHHHHHHTTCCEECC-------SCSSCCHHHHHHHHHHHTCCEEEECCHH
T ss_pred HHHHHHHHCCCcEEEE-------eCCCCCHHHHHHHHHHCCCCEEEEECch
Confidence 4677788887765421 123446888899999888875 556764
No 422
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=29.38 E-value=38 Score=24.19 Aligned_cols=47 Identities=13% Similarity=0.042 Sum_probs=25.4
Q ss_pred CCCchHHhhhhcEEEEEeecceEEEEeCCCchHHHHHHHHHcCccEEEEecCCch
Q 037201 104 GYGFADELKRAWFCVRNVRFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMSDG 158 (177)
Q Consensus 104 gygLa~eLrRAGv~Vr~V~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~~~ 158 (177)
|..++.+|.+.|..|..+ ..|+++..+-+......|+ .++.||.++.
T Consensus 15 G~~la~~L~~~g~~V~vi-------d~~~~~~~~~~~~~~~~~~-~~i~gd~~~~ 61 (153)
T 1id1_A 15 AINTILQLNQRGQNVTVI-------SNLPEDDIKQLEQRLGDNA-DVIPGDSNDS 61 (153)
T ss_dssp HHHHHHHHHHTTCCEEEE-------ECCCHHHHHHHHHHHCTTC-EEEESCTTSH
T ss_pred HHHHHHHHHHCCCCEEEE-------ECCChHHHHHHHHhhcCCC-eEEEcCCCCH
Confidence 444788898888655432 2222333334444444454 4567876654
No 423
>4fc5_A TON_0340, putative uncharacterized protein; unknown function; 2.30A {Thermococcus onnurineus}
Probab=29.36 E-value=36 Score=29.04 Aligned_cols=23 Identities=22% Similarity=0.248 Sum_probs=20.5
Q ss_pred CchHHHHHHHHHcCccEEEEecC
Q 037201 133 SNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 133 sdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
..|-.++..|++.|+.|+-|||+
T Consensus 136 ~~lD~lf~~a~~~gi~tigIGDG 158 (270)
T 4fc5_A 136 DPLDGIFLKARALGIPTIGVGDG 158 (270)
T ss_dssp CCSCHHHHHHHHHTCCEEEEESS
T ss_pred cchHHHHHHHHhCCCCEEEEcCC
Confidence 45788999999999999999996
No 424
>1pt6_A Integrin alpha-1; cell adhesion; 1.87A {Homo sapiens} SCOP: c.62.1.1 PDB: 4a0q_A 1qcy_A 1qc5_A 1qc5_B 1ck4_A 1mhp_A
Probab=29.35 E-value=50 Score=24.77 Aligned_cols=32 Identities=13% Similarity=0.285 Sum_probs=23.0
Q ss_pred ceEEEEeCCC-----chHHHHHHHHHcCccEEEEecC
Q 037201 124 GCLMVVSDDS-----NFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 124 ~clvLVSDds-----df~~~lr~Ar~r~l~TVVVGd~ 155 (177)
..|||+||-. +...+.+.+++.|+...+||=+
T Consensus 111 ~~iillTDG~~~~~~~~~~~~~~~~~~gi~i~~igig 147 (213)
T 1pt6_A 111 KVMVIVTDGESHDNHRLKKVIQDCEDENIQRFSIAIL 147 (213)
T ss_dssp EEEEEEESSCCSCSHHHHHHHHHHHHTTEEEEEEEEC
T ss_pred eEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEec
Confidence 4588888843 2567788888899887776654
No 425
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=29.11 E-value=76 Score=26.58 Aligned_cols=43 Identities=21% Similarity=0.296 Sum_probs=29.2
Q ss_pred cceEEEEeCCC-----chHHHHHHHHHcCccEEEEecCCc--------hhhhhhhc
Q 037201 123 FGCLMVVSDDS-----NFVEVFQEATLRCLKMVVVGDMSD--------GALKRIAN 165 (177)
Q Consensus 123 v~clvLVSDds-----df~~~lr~Ar~r~l~TVVVGd~~~--------~~L~r~Ad 165 (177)
...|||+||-. +=.++-+.|++.|++--+||-+.+ ..|...|+
T Consensus 10 ~k~iillTDG~~~~g~~p~~aa~~a~~~gi~v~tIGig~~~~~~~~~~~~L~~IA~ 65 (242)
T 3rag_A 10 IRQILVITDGCSNIGPDPVEAARRAHRHGIVVNVIGIVGRGDAGEQGYQEAHSIAD 65 (242)
T ss_dssp EEEEEEEESSCCCSSSCHHHHHHHHHHTTCEEEEEEECCSSSCTTCCCHHHHHHHH
T ss_pred ccEEEEEccCCCCCCCCHHHHHHHHHHCCCEEEEEEecCCccccchhHHHHHHHHH
Confidence 34689999975 457788899998887555554221 35666665
No 426
>1eu1_A Dimethyl sulfoxide reductase; molybdenum, molybdenum cofactor, DMSO, molybdopte oxidoreductase; HET: GLC MGD EPE; 1.30A {Rhodobacter sphaeroides} SCOP: b.52.2.2 c.81.1.1 PDB: 4dmr_A* 1dmr_A* 1e5v_A* 1h5n_A* 2dmr_A* 3dmr_A* 1e61_A* 1e60_A* 1e18_A* 1dms_A*
Probab=28.99 E-value=48 Score=30.64 Aligned_cols=47 Identities=4% Similarity=0.014 Sum_probs=33.4
Q ss_pred ecceEEEEeCCCc-------------hHHHHHHHHHcCccEEEEecCCchhhhhhh-ccccc
Q 037201 122 RFGCLMVVSDDSN-------------FVEVFQEATLRCLKMVVVGDMSDGALKRIA-NAFFS 169 (177)
Q Consensus 122 ~v~clvLVSDdsd-------------f~~~lr~Ar~r~l~TVVVGd~~~~~L~r~A-d~~~s 169 (177)
..|+||++--|.- +...|+.|+++|.+.|||.=.- ......| |.|++
T Consensus 177 ~ad~il~~G~N~~~~~~~~~~~~~~~~~~~l~~a~~~G~klivIDPr~-t~ta~~aad~~l~ 237 (780)
T 1eu1_A 177 NTDLMVFWAADPMKTNEIGWVIPDHGAYAGMKALKEKGTRVIAINPVR-TETADYFGADVVS 237 (780)
T ss_dssp HCSEEEEESCCHHHHTTCCSSBCCCHHHHHHHHHHHHTCEEEEESSBC-CHHHHHHTCEEEC
T ss_pred hCCEEEEECCCHHHhcCCCCcccccchHHHHHHHHHCCCeEEEECCCC-CCcccccCCEEee
Confidence 5677777765431 2346888999999999997553 4567776 99986
No 427
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=28.94 E-value=72 Score=23.85 Aligned_cols=42 Identities=17% Similarity=0.183 Sum_probs=28.7
Q ss_pred ceEEEEeCCC-------chHHHHHHHHHcCccEEEEecCC---chhhhhhhc
Q 037201 124 GCLMVVSDDS-------NFVEVFQEATLRCLKMVVVGDMS---DGALKRIAN 165 (177)
Q Consensus 124 ~clvLVSDds-------df~~~lr~Ar~r~l~TVVVGd~~---~~~L~r~Ad 165 (177)
..|||+||-. +..+..+.+++.|+...+||-+. ...|.+.|+
T Consensus 117 ~~iillTDG~~~~~~~~~~~~~a~~l~~~gi~i~~igvG~~~~~~~L~~iA~ 168 (202)
T 1ijb_A 117 RIALLLMASQEPQRMSRNFVRYVQGLKKKKVIVIPVGIGPHANLKQIRLIEK 168 (202)
T ss_dssp EEEEEEECCCCCGGGCTTHHHHHHHHHHTTEEEEEEEESTTSCHHHHHHHHH
T ss_pred eEEEEEccCCCCccchHHHHHHHHHHHHCCCEEEEEecCCcCCHHHHHHHhC
Confidence 4688888842 45677788888998876666442 246777764
No 428
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=28.87 E-value=11 Score=29.09 Aligned_cols=28 Identities=4% Similarity=-0.038 Sum_probs=16.1
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|.||+.+ +.++.+.+.++..|+++..
T Consensus 67 ~vdgiIi~~------~~~~~~~~~~iPvV~~~~~ 94 (277)
T 3hs3_A 67 NVDGIITSA------FTIPPNFHLNTPLVMYDSA 94 (277)
T ss_dssp TCSEEEEEC------CCCCTTCCCSSCEEEESCC
T ss_pred CCCEEEEcc------hHHHHHHhCCCCEEEEccc
Confidence 566666666 2234445566666666644
No 429
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=28.86 E-value=52 Score=22.44 Aligned_cols=29 Identities=7% Similarity=0.072 Sum_probs=22.4
Q ss_pred CchHHHHH-HHHHcCccEEEEecCCchhhh
Q 037201 133 SNFVEVFQ-EATLRCLKMVVVGDMSDGALK 161 (177)
Q Consensus 133 sdf~~~lr-~Ar~r~l~TVVVGd~~~~~L~ 161 (177)
+--..+++ .|++.+...||+|-...+.+.
T Consensus 94 ~~~~~I~~~~a~~~~~dliV~G~~~~~~~~ 123 (146)
T 3s3t_A 94 IPKHTIEDYAKQHPEIDLIVLGATGTNSPH 123 (146)
T ss_dssp CHHHHHHHHHHHSTTCCEEEEESCCSSCTT
T ss_pred ChHHHHHHHHHhhcCCCEEEECCCCCCCcc
Confidence 35678889 899999999999986444443
No 430
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.32 E-value=17 Score=23.82 Aligned_cols=17 Identities=12% Similarity=-0.101 Sum_probs=8.3
Q ss_pred hhhcCCCcCChhHHHHHH
Q 037201 49 LIRNQGRFYNNDKLVNHF 66 (177)
Q Consensus 49 c~~CGrrf~t~~~L~kHF 66 (177)
|..||..|. ..+|..|-
T Consensus 46 C~~C~~~~~-~~~l~~H~ 62 (75)
T 2d9k_A 46 CGNCGRNVL-VKDLKTHP 62 (75)
T ss_dssp CSSSCCEEE-TTGGGTHH
T ss_pred cccCCCcCc-HHHHHHHH
Confidence 444555544 35555553
No 431
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=28.00 E-value=1.2e+02 Score=22.01 Aligned_cols=48 Identities=21% Similarity=0.193 Sum_probs=32.3
Q ss_pred hHHhhhhcEEEEEe----------------ecceEEEEeCCCc----hHHHHHHHHHcCc--cEEEEecC
Q 037201 108 ADELKRAWFCVRNV----------------RFGCLMVVSDDSN----FVEVFQEATLRCL--KMVVVGDM 155 (177)
Q Consensus 108 a~eLrRAGv~Vr~V----------------~v~clvLVSDdsd----f~~~lr~Ar~r~l--~TVVVGd~ 155 (177)
+..|+.+||.|.-. +.|.++|-|-... +.++++.-++++. -.|+||..
T Consensus 24 ~~~l~~~G~~Vi~lG~~~p~e~~v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG~ 93 (137)
T 1ccw_A 24 DHAFTNAGFNVVNIGVLSPQELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGGN 93 (137)
T ss_dssp HHHHHHTTCEEEEEEEEECHHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEES
T ss_pred HHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 56789999999855 6777666654433 3455666667766 45778874
No 432
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=27.77 E-value=40 Score=24.80 Aligned_cols=34 Identities=15% Similarity=0.344 Sum_probs=27.0
Q ss_pred ecceEEE-EeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMV-VSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvL-VSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
|-..+|| +.|..++.++.+.|++.|+.+.+|=|.
T Consensus 48 g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DA 82 (115)
T 2zv3_A 48 GQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDA 82 (115)
T ss_dssp TCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred CCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 4456667 455588999999999999999888665
No 433
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=27.63 E-value=62 Score=25.60 Aligned_cols=42 Identities=19% Similarity=0.283 Sum_probs=28.7
Q ss_pred ceEEEEeCCC-----chHHHHHHHHHcCccEEEEecCC--chh-hhhhhc
Q 037201 124 GCLMVVSDDS-----NFVEVFQEATLRCLKMVVVGDMS--DGA-LKRIAN 165 (177)
Q Consensus 124 ~clvLVSDds-----df~~~lr~Ar~r~l~TVVVGd~~--~~~-L~r~Ad 165 (177)
..|||+||-. +..+.++.++..|+...+||-+. +.. |...|+
T Consensus 127 ~~iIllTDG~~~d~~~~~~~a~~l~~~gi~i~~iGiG~~~~~~~L~~iA~ 176 (266)
T 4hqo_A 127 QLVILMTDGVPNSKYRALEVANKLKQRNVRLAVIGIGQGINHQFNRLIAG 176 (266)
T ss_dssp EEEEEEECSCCSCHHHHHHHHHHHHHTTCEEEEEECSSSCCHHHHHHHHT
T ss_pred eEEEEEccCCCCCchHHHHHHHHHHHCCCEEEEEecCcccCHHHHHHhhC
Confidence 4688888853 46677888888998877766443 333 466664
No 434
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=27.62 E-value=80 Score=26.50 Aligned_cols=34 Identities=15% Similarity=0.229 Sum_probs=26.5
Q ss_pred ecceEEEEeCCCchH---HHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDDSNFV---EVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsdf~---~~lr~Ar~r~l~TVVVGd~ 155 (177)
+...+++.++|..+. +++++.+++|-+.++|++.
T Consensus 253 ~~~vi~~~~~~~~~~~~~~~~~e~~~~g~~v~~i~~~ 289 (334)
T 3hba_A 253 KLSILDVCIRDESYGSHVEQIANVKQRGANLIHLHQT 289 (334)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CceEEEEecCchhHHHHHHHHHHHHHcCCeEEEEECC
Confidence 677788899998776 5666777899999999986
No 435
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=27.61 E-value=1.4e+02 Score=24.01 Aligned_cols=50 Identities=12% Similarity=0.229 Sum_probs=37.3
Q ss_pred chHHhhhhcEEEEEe-----------------ecceEEEEeCC-----------------CchHHHHHHHHHcCccEEEE
Q 037201 107 FADELKRAWFCVRNV-----------------RFGCLMVVSDD-----------------SNFVEVFQEATLRCLKMVVV 152 (177)
Q Consensus 107 La~eLrRAGv~Vr~V-----------------~v~clvLVSDd-----------------sdf~~~lr~Ar~r~l~TVVV 152 (177)
|...|+.+||-|..+ ..|+|||.-.. .+..+.|+...+.|-..++|
T Consensus 45 l~~aL~~~~~~v~~~~~~~~~~~fp~~~~~L~~yDvIIl~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~~GGgll~i 124 (256)
T 2gk3_A 45 LLECLRKGGVDIDYMPAHTVQIAFPESIDELNRYDVIVISDIGSNTFLLQNETFYQLKIKPNALESIKEYVKNGGGLLMI 124 (256)
T ss_dssp HHHHHHHTTCEEEEECHHHHHHCCCCSHHHHHTCSEEEEESCCHHHHHSCHHHHTTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHhcCceEEEEecccchhhCCcChhHHhcCCEEEEeCCchhhcccccccccccccChHHHHHHHHHHHhCCEEEEE
Confidence 667788888888776 46666655322 44558999999999999999
Q ss_pred ecCC
Q 037201 153 GDMS 156 (177)
Q Consensus 153 Gd~~ 156 (177)
|..+
T Consensus 125 gG~~ 128 (256)
T 2gk3_A 125 GGYL 128 (256)
T ss_dssp CSTT
T ss_pred CChh
Confidence 9853
No 436
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=27.52 E-value=84 Score=23.28 Aligned_cols=21 Identities=19% Similarity=0.135 Sum_probs=10.7
Q ss_pred cEEEEecCC-chhhhhhhcccc
Q 037201 148 KMVVVGDMS-DGALKRIANAFF 168 (177)
Q Consensus 148 ~TVVVGd~~-~~~L~r~Ad~~~ 168 (177)
.+++|||+. |-...+.|++.+
T Consensus 112 ~~~~vGD~~nDi~~~~~ag~~~ 133 (189)
T 3mn1_A 112 QVAYLGDDLPDLPVIRRVGLGM 133 (189)
T ss_dssp GEEEEECSGGGHHHHHHSSEEE
T ss_pred HEEEECCCHHHHHHHHHCCCeE
Confidence 467777743 224444555443
No 437
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=27.28 E-value=1.1e+02 Score=24.55 Aligned_cols=33 Identities=21% Similarity=0.171 Sum_probs=21.4
Q ss_pred HHHHHHHcCc---cEEEEecCC-chhhhhhhccccch
Q 037201 138 VFQEATLRCL---KMVVVGDMS-DGALKRIANAFFSW 170 (177)
Q Consensus 138 ~lr~Ar~r~l---~TVVVGd~~-~~~L~r~Ad~~~sW 170 (177)
+.+.+.+.|+ .+++|||+. |-...+.|++.+-|
T Consensus 250 ~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~ 286 (335)
T 3n28_A 250 LLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY 286 (335)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe
Confidence 4445556665 799999964 33556677776655
No 438
>3ks9_A Mglur1, metabotropic glutamate receptor 1; glutamate receptors, dimerization, glutamic acid BIN structural genomics, structural genomics consortium; HET: Z99 NAG; 1.90A {Homo sapiens} SCOP: c.93.1.1 PDB: 1ewk_A* 1ewt_A* 1ewv_A 1isr_A* 1iss_A* 3lmk_A*
Probab=27.27 E-value=76 Score=27.40 Aligned_cols=35 Identities=3% Similarity=-0.068 Sum_probs=24.4
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccE--E-EEecCC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKM--V-VVGDMS 156 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~T--V-VVGd~~ 156 (177)
+.+.+++..+..+...+++.|++.|+.. + +.+|.+
T Consensus 256 ~a~vii~~~~~~~~~~l~~~~~~~g~~~k~~~i~s~~w 293 (496)
T 3ks9_A 256 KARVVVCFCEGMTVRGLLSAMRRLGVVGEFSLIGSDGW 293 (496)
T ss_dssp TTCEEEEECCHHHHHHHHHHHHHHTCCSCCEEEECTTT
T ss_pred ceEEEEEecChHHHHHHHHHHHHhCCCCcEEEEEechh
Confidence 3445666667678889999999988873 3 445555
No 439
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=27.11 E-value=77 Score=23.48 Aligned_cols=51 Identities=16% Similarity=0.098 Sum_probs=30.2
Q ss_pred cceEEEEeCCCchHHHHHHHHHcCccEEEEecCC----chhhhhh--hcccc-chhhh
Q 037201 123 FGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMS----DGALKRI--ANAFF-SWSDL 173 (177)
Q Consensus 123 v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~----~~~L~r~--Ad~~~-sW~ev 173 (177)
.+-.+.|-|..+-...++-|+..|+++|.|..+. ...+... +|..+ ++.++
T Consensus 161 ~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el 218 (231)
T 2p11_A 161 ARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDL 218 (231)
T ss_dssp CSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGG
T ss_pred CceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHHH
Confidence 3445566665432236788999999999987652 1234443 66544 35554
No 440
>1mf7_A Integrin alpha M; cell adhesion; 1.25A {Homo sapiens} SCOP: c.62.1.1 PDB: 1na5_A 1jlm_A 1ido_A 1m1u_A 3q3g_G 1n9z_A 1bhq_1 1bho_1 1idn_1 3qa3_G
Probab=26.94 E-value=54 Score=24.02 Aligned_cols=42 Identities=26% Similarity=0.331 Sum_probs=28.2
Q ss_pred ceEEEEeCC------CchHHHHHHHHHcCccEEEEecCC-------chhhhhhhc
Q 037201 124 GCLMVVSDD------SNFVEVFQEATLRCLKMVVVGDMS-------DGALKRIAN 165 (177)
Q Consensus 124 ~clvLVSDd------sdf~~~lr~Ar~r~l~TVVVGd~~-------~~~L~r~Ad 165 (177)
..|||+||- .+..++++.+++.|+...+||-+. ...|...|.
T Consensus 108 ~~iillTDG~~~~d~~~~~~~~~~~~~~gi~v~~igvG~~~~~~~~~~~L~~iA~ 162 (194)
T 1mf7_A 108 KILVVITDGEKFGDPLGYEDVIPEADREGVIRYVIGVGDAFRSEKSRQELNTIAS 162 (194)
T ss_dssp EEEEEEESSCCBSCSSCGGGTHHHHHHTTEEEEEEEESGGGCSHHHHHHHHHHSC
T ss_pred eEEEEEcCCCCCCCchhhHHHHHHHHHCCCEEEEEEecccccccccHHHHHHHhC
Confidence 357788863 234678899999998777766543 145666665
No 441
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=26.88 E-value=1.2e+02 Score=22.23 Aligned_cols=9 Identities=11% Similarity=-0.112 Sum_probs=4.0
Q ss_pred HHHHcCccE
Q 037201 141 EATLRCLKM 149 (177)
Q Consensus 141 ~Ar~r~l~T 149 (177)
.|+..|+.+
T Consensus 132 ~a~~ag~~~ 140 (188)
T 2r8e_A 132 VMEKVGLSV 140 (188)
T ss_dssp HHTTSSEEE
T ss_pred HHHHCCCEE
Confidence 344445543
No 442
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=26.75 E-value=68 Score=24.24 Aligned_cols=46 Identities=13% Similarity=0.179 Sum_probs=26.6
Q ss_pred CchHHhhhhcEEEEEe------------------ecceEEEEeCCCchHHHHHHHHHcCccEEEEecCC
Q 037201 106 GFADELKRAWFCVRNV------------------RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V------------------~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
|+..++++.|+.+... ++|.|| ++.+.+ .+.++. .++..|+++...
T Consensus 26 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI-~~~~~~-~~~~~~---~~iPvV~~~~~~ 89 (280)
T 3gyb_A 26 SLSDVLTPKGYRLSVIDSLTSQAGTDPITSALSMRPDGII-IAQDIP-DFTVPD---SLPPFVIAGTRI 89 (280)
T ss_dssp HHHHHHGGGTCEEEEECSSSSCSSSCHHHHHHTTCCSEEE-EESCC------------CCCEEEESCCC
T ss_pred HHHHHHHHCCCEEEEEeCCCchHHHHHHHHHHhCCCCEEE-ecCCCC-hhhHhh---cCCCEEEECCCC
Confidence 5566777777777665 678888 665555 344444 788888887653
No 443
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=26.73 E-value=84 Score=22.90 Aligned_cols=33 Identities=12% Similarity=-0.017 Sum_probs=23.7
Q ss_pred ceEEEEeCCCc-----hHHHHHHHHHcCccEEEEecCC
Q 037201 124 GCLMVVSDDSN-----FVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 124 ~clvLVSDdsd-----f~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
..|||+||-.. ..++.+.+++.|+...+||-+.
T Consensus 124 ~~iillTDG~~~~~~~~~~~~~~l~~~gi~v~~igvG~ 161 (178)
T 2xgg_A 124 KLVIGMTDGESDSDFRTVRAAKEIRELGGIVTVLAVGH 161 (178)
T ss_dssp EEEEEEESSCCCHHHHHSHHHHHHHHTTCEEEEEECC-
T ss_pred EEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEcCC
Confidence 46889998543 4556788888898888877653
No 444
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=26.67 E-value=33 Score=29.90 Aligned_cols=45 Identities=16% Similarity=-0.020 Sum_probs=27.3
Q ss_pred CCchHHhhhhcEEEEEeecceEEEEeCCCchHHHHHHHHHcCccEEEEecCCchhhh
Q 037201 105 YGFADELKRAWFCVRNVRFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMSDGALK 161 (177)
Q Consensus 105 ygLa~eLrRAGv~Vr~V~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~~~~L~ 161 (177)
.-++.+|+..|+.|..+ -. | .+.++.+++.|+. |+.||.++..+=
T Consensus 17 ~~va~~L~~~g~~vvvI-------d~-d---~~~v~~~~~~g~~-vi~GDat~~~~L 61 (413)
T 3l9w_A 17 QITGRLLLSSGVKMVVL-------DH-D---PDHIETLRKFGMK-VFYGDATRMDLL 61 (413)
T ss_dssp HHHHHHHHHTTCCEEEE-------EC-C---HHHHHHHHHTTCC-CEESCTTCHHHH
T ss_pred HHHHHHHHHCCCCEEEE-------EC-C---HHHHHHHHhCCCe-EEEcCCCCHHHH
Confidence 33688899888665433 12 2 2345666667764 678887765433
No 445
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=26.35 E-value=2.2e+02 Score=21.88 Aligned_cols=62 Identities=11% Similarity=-0.010 Sum_probs=33.8
Q ss_pred HHhhhhcEEEEEeec----------ceEEEEeCCCchHHHHHH-HHHcCc---cEEEEecCC-chhhhhhhccccch
Q 037201 109 DELKRAWFCVRNVRF----------GCLMVVSDDSNFVEVFQE-ATLRCL---KMVVVGDMS-DGALKRIANAFFSW 170 (177)
Q Consensus 109 ~eLrRAGv~Vr~V~v----------~clvLVSDdsdf~~~lr~-Ar~r~l---~TVVVGd~~-~~~L~r~Ad~~~sW 170 (177)
..|+..|+.+....+ -++=++.-..+=...++. +.+.|+ .+++|||+. |-...+.|+..+-|
T Consensus 176 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~ 252 (289)
T 3gyg_A 176 KICEEYGVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLL 252 (289)
T ss_dssp HHHHHHTEEEEEEECCGGGTCCTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC
T ss_pred HHHHHcCCCEEEEEccccccCCCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEE
Confidence 446667776555433 233344444444444444 445565 588999853 33556666655544
No 446
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=26.34 E-value=58 Score=22.19 Aligned_cols=28 Identities=25% Similarity=0.297 Sum_probs=22.5
Q ss_pred CchHHHHHHHHHcCccEEEEecCCchhh
Q 037201 133 SNFVEVFQEATLRCLKMVVVGDMSDGAL 160 (177)
Q Consensus 133 sdf~~~lr~Ar~r~l~TVVVGd~~~~~L 160 (177)
+--..+++.|++.+...||+|-...+.+
T Consensus 86 ~~~~~I~~~a~~~~~dliV~G~~~~~~~ 113 (137)
T 2z08_A 86 VPAEAILQAARAEKADLIVMGTRGLGAL 113 (137)
T ss_dssp SHHHHHHHHHHHTTCSEEEEESSCTTCC
T ss_pred CHHHHHHHHHHHcCCCEEEECCCCCchh
Confidence 4567899999999999999998743333
No 447
>1tmo_A TMAO reductase, trimethylamine N-oxide reductase; oxidoreductase, oxotransferase, molybdoenzyme, MO-cofactor, molybdenum; HET: 2MD; 2.50A {Shewanella massilia} SCOP: b.52.2.2 c.81.1.1
Probab=26.33 E-value=59 Score=30.24 Aligned_cols=47 Identities=4% Similarity=0.015 Sum_probs=34.5
Q ss_pred ecceEEEEeCCCc-------------hHHHHHHHHH---cCc-cEEEEecCCchhhhhhh-ccccc
Q 037201 122 RFGCLMVVSDDSN-------------FVEVFQEATL---RCL-KMVVVGDMSDGALKRIA-NAFFS 169 (177)
Q Consensus 122 ~v~clvLVSDdsd-------------f~~~lr~Ar~---r~l-~TVVVGd~~~~~L~r~A-d~~~s 169 (177)
..|+||++--|.- +...|+.|++ +|. +-|||.=. .......| |.|++
T Consensus 210 ~ad~il~~G~Np~~~~~~~~~~~~~~~~~~~~~a~~~~~~G~~klivIDPr-~t~ta~~a~d~~l~ 274 (829)
T 1tmo_A 210 HSDTIVLWSNDPYKNLQVGWNAETHESFAYLAQLKEKVKQGKIRVISIDPV-VTKTQAYLGCEQLY 274 (829)
T ss_dssp HCSEEEEESCCHHHHTSCCSSBCCCTHHHHHHHHHHHHHHTSSEEEEECSS-CCHHHHHHTCEEEC
T ss_pred hCCEEEEECCChhhccccccccccchHHHHHHHHHHHhhCCCceEEEECCC-CCCcchhhcCEEec
Confidence 4577888865542 3456788898 998 99999665 35678888 99884
No 448
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=26.16 E-value=86 Score=26.38 Aligned_cols=35 Identities=3% Similarity=0.027 Sum_probs=28.2
Q ss_pred ecceEEEEeCCC-chHHHHHHHHHcCccEEEEecCC
Q 037201 122 RFGCLMVVSDDS-NFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 122 ~v~clvLVSDds-df~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
+...+++++++. .+..++++.+++|-+.++|++..
T Consensus 257 ~~pvi~~~~~~~~~~~~~~~~~~~~g~~v~~i~~~~ 292 (352)
T 3g68_A 257 DSTIFILDTGKEPRVTKMIDVLSGWTENVFAIGRDV 292 (352)
T ss_dssp TEEEEEEECSCCTTHHHHHHHHHTTCSCEEEEESSC
T ss_pred CceEEEEECCchHHHHHHHHHHHHcCCeEEEEecCC
Confidence 566677777664 37889999999999999999864
No 449
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=26.06 E-value=83 Score=23.76 Aligned_cols=36 Identities=14% Similarity=0.092 Sum_probs=25.1
Q ss_pred chHHhhhhcEEEEEe-------ecceEEEEeCCCchHHHHHHHH
Q 037201 107 FADELKRAWFCVRNV-------RFGCLMVVSDDSNFVEVFQEAT 143 (177)
Q Consensus 107 La~eLrRAGv~Vr~V-------~v~clvLVSDdsdf~~~lr~Ar 143 (177)
+...|+++|+.|..+ +.|.||| +=--+|++.++..+
T Consensus 18 i~~al~~~G~~~~v~~~~~~l~~~D~lil-PG~g~~~~~~~~~~ 60 (211)
T 4gud_A 18 VKFAIERLGYAVTISRDPQVVLAADKLFL-PGVGTASEAMKNLT 60 (211)
T ss_dssp HHHHHHHTTCCEEEECCHHHHHHCSEEEE-CCCSCHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEECCHHHHhCCCEEEE-CCCCCHHHHHHHHH
Confidence 567899999999887 7787777 54455666544433
No 450
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=26.05 E-value=63 Score=24.80 Aligned_cols=30 Identities=27% Similarity=0.247 Sum_probs=13.2
Q ss_pred cceEEEEeCCCchHHHHHHHHHcCccEEEEe
Q 037201 123 FGCLMVVSDDSNFVEVFQEATLRCLKMVVVG 153 (177)
Q Consensus 123 v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVG 153 (177)
+|-|++.+-+.+ .+.++.+++.++..|+++
T Consensus 68 vdgiIi~~~~~~-~~~~~~l~~~~iPvV~~~ 97 (290)
T 2rgy_A 68 CDGVVVISHDLH-DEDLDELHRMHPKMVFLN 97 (290)
T ss_dssp CSEEEECCSSSC-HHHHHHHHHHCSSEEEES
T ss_pred ccEEEEecCCCC-HHHHHHHhhcCCCEEEEc
Confidence 444444433322 334444444455555554
No 451
>2lkc_A Translation initiation factor IF-2; NMR {Geobacillus stearothermophilus} PDB: 2lkd_A*
Probab=25.91 E-value=76 Score=21.98 Aligned_cols=36 Identities=17% Similarity=0.198 Sum_probs=25.5
Q ss_pred ecceEEEEeCCCc-----hHHHHHHHHHcCccEEEEecCCc
Q 037201 122 RFGCLMVVSDDSN-----FVEVFQEATLRCLKMVVVGDMSD 157 (177)
Q Consensus 122 ~v~clvLVSDdsd-----f~~~lr~Ar~r~l~TVVVGd~~~ 157 (177)
+.|++++|-|-++ --+.++.....+...++||+-.|
T Consensus 78 ~~d~~i~v~d~~~~~~~~~~~~l~~~~~~~~p~ilv~nK~D 118 (178)
T 2lkc_A 78 VTDIVILVVAADDGVMPQTVEAINHAKAANVPIIVAINKMD 118 (178)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHGGGSCCEEEEEETTT
T ss_pred hCCEEEEEEECCCCCcHHHHHHHHHHHhCCCCEEEEEECcc
Confidence 6788888877433 23455666677899999998664
No 452
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=25.89 E-value=66 Score=24.66 Aligned_cols=43 Identities=14% Similarity=0.011 Sum_probs=28.0
Q ss_pred hHHhhhhcEEEEEeecceEEEEeCCCchHHHHHHHHHcCccEEEEe
Q 037201 108 ADELKRAWFCVRNVRFGCLMVVSDDSNFVEVFQEATLRCLKMVVVG 153 (177)
Q Consensus 108 a~eLrRAGv~Vr~V~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVG 153 (177)
...|+..|+.+-.++.... .+...|...++.|.+-|.++|++.
T Consensus 67 ~~~l~~~gl~i~~~~~~~~---~~~~~~~~~i~~A~~lGa~~v~~~ 109 (257)
T 3lmz_A 67 HDKCAAHKVTGYAVGPIYM---KSEEEIDRAFDYAKRVGVKLIVGV 109 (257)
T ss_dssp HHHHHHTTCEEEEEEEEEE---CSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHcCCeEEEEecccc---CCHHHHHHHHHHHHHhCCCEEEec
Confidence 4556777877665543321 344567778888888888888774
No 453
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=25.68 E-value=1e+02 Score=24.41 Aligned_cols=16 Identities=19% Similarity=0.221 Sum_probs=9.8
Q ss_pred HHHHHhcccceeeehh
Q 037201 9 LKKLISSFEVVKYMVA 24 (177)
Q Consensus 9 Lr~~A~~FG~Vv~~~A 24 (177)
++++|+..|.=+..+-
T Consensus 3 i~diA~~agVS~~TVS 18 (340)
T 1qpz_A 3 IKDVAKRANVSTTTVS 18 (340)
T ss_dssp HHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHCCCHHHHH
Confidence 5677777776444443
No 454
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=25.68 E-value=46 Score=23.10 Aligned_cols=41 Identities=17% Similarity=0.140 Sum_probs=25.9
Q ss_pred HhhhhcEEEEEeecceEEEEeCCCchHHHHHHHH--HcCccEEEEecCC
Q 037201 110 ELKRAWFCVRNVRFGCLMVVSDDSNFVEVFQEAT--LRCLKMVVVGDMS 156 (177)
Q Consensus 110 eLrRAGv~Vr~V~v~clvLVSDdsdf~~~lr~Ar--~r~l~TVVVGd~~ 156 (177)
-|++.|+-...+.|+ .|.+..+.+.... .+.|-+|+|||+.
T Consensus 23 ~L~~~gi~y~~idi~------~d~~~~~~~~~~~~G~~tVP~I~i~Dg~ 65 (92)
T 2lqo_A 23 ALTANRIAYDEVDIE------HNRAAAEFVGSVNGGNRTVPTVKFADGS 65 (92)
T ss_dssp HHHHTTCCCEEEETT------TCHHHHHHHHHHSSSSSCSCEEEETTSC
T ss_pred HHHhcCCceEEEEcC------CCHHHHHHHHHHcCCCCEeCEEEEeCCE
Confidence 356677776665554 5555544443332 4678899999974
No 455
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=25.54 E-value=61 Score=28.68 Aligned_cols=62 Identities=13% Similarity=0.147 Sum_probs=32.9
Q ss_pred HHHHHHHhh----cCCCCCCCch-----HHhhhhcEEEE-EeecceEEEEeCCCchHHHHHHHH---HcCccEEE
Q 037201 90 KYKMAVSAI----LTPKVGYGFA-----DELKRAWFCVR-NVRFGCLMVVSDDSNFVEVFQEAT---LRCLKMVV 151 (177)
Q Consensus 90 KY~~Aar~v----l~pkvgygLa-----~eLrRAGv~Vr-~V~v~clvLVSDdsdf~~~lr~Ar---~r~l~TVV 151 (177)
+|....... -+|.+|+++. ..|+..|..-. ....|.+|...++......++.|. +.|+++.+
T Consensus 319 RYD~Lv~~fg~~~~~PavGFaig~eRl~~~l~~~~~~~~~~~~~~v~v~~~~~~~~~~a~~la~~LR~~Gi~ve~ 393 (456)
T 3lc0_A 319 RYDNLLTTYGSPTPIPCAGFGFGDCVIVELLQEKRLLPDIPHVVDDVVIPFDESMRPHALAVLRRLRDAGRSADI 393 (456)
T ss_dssp ECSSHHHHTTCSSCCCEEEEEEESSHHHHHHHHTTCCCCCCCCEEEEEEESSGGGHHHHHHHHHHHHHTTCCEEE
T ss_pred cHHHHHHHhCCCCCCCEEEEEeEHHHHHHHHHhcCCCCccCCCCcEEEEEcCHHHHHHHHHHHHHHHHCCCeEEE
Confidence 565555543 3688998875 44666554211 113455555555554455555554 35665544
No 456
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=25.53 E-value=1.8e+02 Score=20.44 Aligned_cols=40 Identities=18% Similarity=0.164 Sum_probs=24.2
Q ss_pred EEEeCCCchHHHHHHHHHcCc---cEEEEecC--Cchhhhhhhcc
Q 037201 127 MVVSDDSNFVEVFQEATLRCL---KMVVVGDM--SDGALKRIANA 166 (177)
Q Consensus 127 vLVSDdsdf~~~lr~Ar~r~l---~TVVVGd~--~~~~L~r~Ad~ 166 (177)
++.+..++=..+...+...|+ .+++|||+ +|-...+.|-+
T Consensus 152 ~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~ 196 (234)
T 3ddh_A 152 IEVMSDKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGG 196 (234)
T ss_dssp EEEESCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTC
T ss_pred eeecCCCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCC
Confidence 345556655555555556676 47899998 45555555554
No 457
>1kqf_A FDH-N alpha, formate dehydrogenase, nitrate-inducible, major S; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 1kqg_A*
Probab=25.42 E-value=69 Score=30.99 Aligned_cols=47 Identities=15% Similarity=0.099 Sum_probs=34.9
Q ss_pred ecceEEEEeCCC-----chHHHHHHHH-HcCccEEEEecCCchhhhhhhccccc
Q 037201 122 RFGCLMVVSDDS-----NFVEVFQEAT-LRCLKMVVVGDMSDGALKRIANAFFS 169 (177)
Q Consensus 122 ~v~clvLVSDds-----df~~~lr~Ar-~r~l~TVVVGd~~~~~L~r~Ad~~~s 169 (177)
..|+||++.-+. .....++.|+ ++|.+-|||.=.- ......||.|++
T Consensus 222 ~ad~il~~G~N~~~~~p~~~~~i~~a~~~~GaklivIDPr~-t~ta~~AD~~l~ 274 (1015)
T 1kqf_A 222 NANVVMVMGGNAAEAHPVGFRWAMEAKNNNDATLIVVDPRF-TRTASVADIYAP 274 (1015)
T ss_dssp GCSEEEEESCCHHHHSTTTTHHHHHHHHHSCCEEEEECSSC-CHHHHTCSEEEC
T ss_pred hCCEEEEECCChhhhCchHHHHHHHHHHHCCCeEEEEeCCC-CchhHhhCeeec
Confidence 567888886552 2334677888 8999999997653 567889999885
No 458
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens}
Probab=25.38 E-value=52 Score=29.11 Aligned_cols=43 Identities=12% Similarity=0.187 Sum_probs=26.0
Q ss_pred CchHHhhhhcEEEEEeecceEEEEeCCCchHHHHHHHHHcCccE-EEEecC
Q 037201 106 GFADELKRAWFCVRNVRFGCLMVVSDDSNFVEVFQEATLRCLKM-VVVGDM 155 (177)
Q Consensus 106 gLa~eLrRAGv~Vr~V~v~clvLVSDdsdf~~~lr~Ar~r~l~T-VVVGd~ 155 (177)
.++.+|+.+|+.|.. ...++..+..-++.|.+.|... ||||+.
T Consensus 437 ~l~~~Lr~~Gi~ve~-------~~~~~~~l~~q~k~A~~~g~~~~viiG~~ 480 (517)
T 4g85_A 437 KLVSELWDAGIKAEL-------LYKKNPKLLNQLQYCEEAGIPLVAIIGEQ 480 (517)
T ss_dssp HHHHHHHHTTCCEEE-------CSSSSCCHHHHHHHHHHHCCCEEEEECHH
T ss_pred HHHHHHHHCCCcEEE-------EeCCCCCHHHHHHHHHHCCCCEEEEECCh
Confidence 356666666665532 1233445777788888877764 456654
No 459
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=25.25 E-value=74 Score=25.18 Aligned_cols=43 Identities=12% Similarity=0.135 Sum_probs=28.3
Q ss_pred ceEEEEeCCC-----chHHHHHHHHHcCccEEEEecCC--ch-hhhhhhcc
Q 037201 124 GCLMVVSDDS-----NFVEVFQEATLRCLKMVVVGDMS--DG-ALKRIANA 166 (177)
Q Consensus 124 ~clvLVSDds-----df~~~lr~Ar~r~l~TVVVGd~~--~~-~L~r~Ad~ 166 (177)
..|||+||-. +..+.++.+++.|+...+||-+. +. .|...|+.
T Consensus 130 ~~iillTDG~~~d~~~~~~~~~~l~~~gv~i~~igiG~~~~~~~L~~iA~~ 180 (281)
T 4hqf_A 130 QLVVILTDGIPDSIQDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGC 180 (281)
T ss_dssp EEEEEEESSCCSCHHHHHHHHHHHHHTTCEEEEEEESSSCCHHHHHHHTTS
T ss_pred EEEEEEecCCCCCcHHHHHHHHHHHHCCCEEEEEeCCCccCHHHHHhhhCC
Confidence 4588888853 46677788888888766665432 23 46777654
No 460
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=25.17 E-value=84 Score=26.57 Aligned_cols=77 Identities=17% Similarity=0.299 Sum_probs=47.0
Q ss_pred hHHHHHHHHhhcCCCC----C----CCchHH----hhh-hcEEEEEe---------------ecceEEEEeCCCchHH--
Q 037201 88 MEKYKMAVSAILTPKV----G----YGFADE----LKR-AWFCVRNV---------------RFGCLMVVSDDSNFVE-- 137 (177)
Q Consensus 88 ~~KY~~Aar~vl~pkv----g----ygLa~e----LrR-AGv~Vr~V---------------~v~clvLVSDdsdf~~-- 137 (177)
.+++++.|..+...+. | ||+|.| |+. +.++..-. +...++++++|..+..
T Consensus 218 ~~~~~~~a~~~~~~~~~~~lG~G~~~~~A~E~aLKl~E~s~i~ae~~~~~E~~HGp~ali~~~~~vi~l~~~~~~~~~~~ 297 (375)
T 2zj3_A 218 DDEIQKLATELYHQKSVLIMGRGYHYATCLEGALKIKEITYMHSEGILAGELKHGPLALVDKLMPVIMIIMRDHTYAKCQ 297 (375)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECGGGHHHHHHHHHHHHHHHCCEEEEEEGGGGGGTGGGGCSTTSCEEEEECSSTTHHHHH
T ss_pred hHHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHHhhhccccccHHHhccCcHHHcCCCCeEEEEECCChhHHHHH
Confidence 4567777777654432 3 344432 333 34444444 5667888998887664
Q ss_pred -HHHHHHHcCccEEEEecCCchhhhhhh
Q 037201 138 -VFQEATLRCLKMVVVGDMSDGALKRIA 164 (177)
Q Consensus 138 -~lr~Ar~r~l~TVVVGd~~~~~L~r~A 164 (177)
++++.+.+|-+.++|++..+..+...+
T Consensus 298 ~~~~e~~~rg~~v~~i~~~~~~~~~~~~ 325 (375)
T 2zj3_A 298 NALQQVVARQGRPVVICDKEDTETIKNT 325 (375)
T ss_dssp HHHHHHHHTTCCCEEEEETTCHHHHHHC
T ss_pred HHHHHHHHcCCeEEEEECCCchhhhhcc
Confidence 555566789999999986434444433
No 461
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=25.07 E-value=71 Score=22.59 Aligned_cols=29 Identities=10% Similarity=0.164 Sum_probs=21.9
Q ss_pred CchHHHHHHHHHcCccEEEEecCCchhhh
Q 037201 133 SNFVEVFQEATLRCLKMVVVGDMSDGALK 161 (177)
Q Consensus 133 sdf~~~lr~Ar~r~l~TVVVGd~~~~~L~ 161 (177)
+--..+++.|++.+...||+|-...+.+.
T Consensus 104 ~~~~~I~~~a~~~~~DlIV~G~~g~~~~~ 132 (170)
T 2dum_A 104 IPWDEIVKVAEEENVSLIILPSRGKLSLS 132 (170)
T ss_dssp CHHHHHHHHHHHTTCSEEEEESCCCCC--
T ss_pred ChHHHHHHHHHHcCCCEEEECCCCCCccc
Confidence 35678999999999999999987434443
No 462
>1dp4_A Atrial natriuretic peptide receptor A; periplasmic binding protein fold, dimer, hormone/growth FACT receptor, lyase complex; HET: NAG; 2.00A {Rattus norvegicus} SCOP: c.93.1.1 PDB: 1t34_A* 3a3k_A*
Probab=24.89 E-value=66 Score=26.15 Aligned_cols=35 Identities=14% Similarity=0.077 Sum_probs=26.6
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCcc----EEEEecCC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLK----MVVVGDMS 156 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~----TVVVGd~~ 156 (177)
+.+.|++.++..+...+++.|++.|+. +.+.+|..
T Consensus 206 ~~~viv~~~~~~~~~~~~~~a~~~g~~~~~~~~i~~~~~ 244 (435)
T 1dp4_A 206 KGRVIYICSSPDAFRNLMLLALNAGLTGEDYVFFHLDVF 244 (435)
T ss_dssp HCSEEEEESCHHHHHHHHHHHHHTTCCTTTCEEEEECTT
T ss_pred hCceEEEecChHHHHHHHHHHHHcCCCCCCEEEEEEecc
Confidence 567888888888889999999998885 33445543
No 463
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=24.86 E-value=49 Score=28.35 Aligned_cols=34 Identities=18% Similarity=0.325 Sum_probs=30.3
Q ss_pred cceEEEEeCCCchHHHHHHHHHcCccEEEEecCC
Q 037201 123 FGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 123 v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
.++++...+-.|...+++.|++.++..+++|.++
T Consensus 15 a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGS 48 (340)
T 1uxy_A 15 AQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGS 48 (340)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCT
T ss_pred ccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCc
Confidence 4668888888999999999999999999999886
No 464
>2nvo_A RO sixty-related protein, RSR; alpha helical repeats, VON willebrand factor A domain, beta- RNA binding protein; 1.89A {Deinococcus radiodurans}
Probab=24.60 E-value=82 Score=28.30 Aligned_cols=35 Identities=17% Similarity=0.283 Sum_probs=27.9
Q ss_pred ecceEEEEeCC------CchHHHHHHHHHc---CccEEEEecCC
Q 037201 122 RFGCLMVVSDD------SNFVEVFQEATLR---CLKMVVVGDMS 156 (177)
Q Consensus 122 ~v~clvLVSDd------sdf~~~lr~Ar~r---~l~TVVVGd~~ 156 (177)
+.+.+||+||- .+..++++.+++. +++.|+||-+.
T Consensus 456 ~~~~vIliTD~~~~~g~~~~~~al~~~r~~~~~~~klv~i~l~~ 499 (535)
T 2nvo_A 456 DVDTFVVYTDNETWAGQVHPTVALDQYAQKMGRAPKLIVVGLTA 499 (535)
T ss_dssp CCSEEEEEESSCCCCCSSCHHHHHHHHHHHHSCCCEEEEEETTC
T ss_pred CCCEEEEEeCCCccCCCCCHHHHHHHHHHhhCCCCeEEEEeccC
Confidence 67889999985 2466788999976 88999998664
No 465
>1vhv_A Diphthine synthase; structural genomics, transferase; HET: MSE; 1.75A {Archaeoglobus fulgidus} SCOP: c.90.1.1
Probab=24.59 E-value=1.2e+02 Score=24.43 Aligned_cols=48 Identities=13% Similarity=0.036 Sum_probs=36.9
Q ss_pred ceEEEEeCCCch----HHHHHHHHHcCccEEEEecCCchhhhhhhccccchhh
Q 037201 124 GCLMVVSDDSNF----VEVFQEATLRCLKMVVVGDMSDGALKRIANAFFSWSD 172 (177)
Q Consensus 124 ~clvLVSDdsdf----~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~sW~e 172 (177)
+..+|+|=|+-| ..+++.+++.|+...||-..+ ....=.|-+.+||.+
T Consensus 89 ~Va~L~~GDP~iy~~~~~l~~~~~~~gi~vevIPGiS-s~~aa~a~~G~pl~~ 140 (268)
T 1vhv_A 89 SVVLLVPGDPMVATTHSAIKLEAERKGVKTRIIHGAS-ISTAVCGLTGLHNYR 140 (268)
T ss_dssp EEEEEESBCTTSSSHHHHHHHHHHHTTCCEEEECCCC-HHHHHHHHHCCCGGG
T ss_pred CEEEEeCCCCcccCcHHHHHHHHHHCCCcEEEECCcc-HHHHHHHHcCCCccc
Confidence 456677888876 456777888899999998876 566667888888876
No 466
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=24.39 E-value=1.1e+02 Score=21.27 Aligned_cols=29 Identities=7% Similarity=-0.055 Sum_probs=23.0
Q ss_pred CCchHHHHHH-HHHcCccEEEEecCCchhh
Q 037201 132 DSNFVEVFQE-ATLRCLKMVVVGDMSDGAL 160 (177)
Q Consensus 132 dsdf~~~lr~-Ar~r~l~TVVVGd~~~~~L 160 (177)
.+--..+++. |++.+...||+|-...+.+
T Consensus 104 g~~~~~I~~~~a~~~~~DlIV~G~~g~~~~ 133 (156)
T 3fg9_A 104 GDVDDVILEQVIPEFKPDLLVTGADTEFPH 133 (156)
T ss_dssp SCHHHHHHHTHHHHHCCSEEEEETTCCCTT
T ss_pred CCHHHHHHHHHHHhcCCCEEEECCCCCCcc
Confidence 4456788898 9999999999998754444
No 467
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=24.38 E-value=1.3e+02 Score=24.18 Aligned_cols=49 Identities=16% Similarity=0.014 Sum_probs=32.4
Q ss_pred chHHhhhhcEEEEEe----------------ecceEEEEeC----CCchHHHHHHHHHcCcc-EEEEecC
Q 037201 107 FADELKRAWFCVRNV----------------RFGCLMVVSD----DSNFVEVFQEATLRCLK-MVVVGDM 155 (177)
Q Consensus 107 La~eLrRAGv~Vr~V----------------~v~clvLVSD----dsdf~~~lr~Ar~r~l~-TVVVGd~ 155 (177)
++..|+.+|+.|... +.|.++|-+= -..+..+++..++.+.+ .|+||..
T Consensus 143 va~~L~~~G~~Vi~LG~~vp~e~l~~~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~~~~~~~v~vGG~ 212 (258)
T 2i2x_B 143 VTALLRANGYNVVDLGRDVPAEEVLAAVQKEKPIMLTGTALMTTTMYAFKEVNDMLLENGIKIPFACGGG 212 (258)
T ss_dssp HHHHHHHTTCEEEEEEEECCSHHHHHHHHHHCCSEEEEECCCTTTTTHHHHHHHHHHTTTCCCCEEEEST
T ss_pred HHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEEeeccCCHHHHHHHHHHHHhcCCCCcEEEECc
Confidence 467899999999866 6666665441 23466677777776654 3566663
No 468
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=24.35 E-value=77 Score=22.63 Aligned_cols=44 Identities=9% Similarity=-0.042 Sum_probs=30.8
Q ss_pred hHHhhhhcEEEEEeecceEEEEeCCCchHHHHHHHHHcCccEEEEecCC
Q 037201 108 ADELKRAWFCVRNVRFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 108 a~eLrRAGv~Vr~V~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
...|+..|+.+. +-+.+...+--..+++.|++.+...||+|-..
T Consensus 84 ~~~~~~~g~~~~-----~~~~v~~G~~~~~I~~~a~~~~~DLIV~G~~g 127 (155)
T 3dlo_A 84 VSIIRKEGAEGE-----EHLLVRGKEPPDDIVDFADEVDAIAIVIGIRK 127 (155)
T ss_dssp HHHHHHTTCCEE-----EEEEESSSCHHHHHHHHHHHTTCSEEEEECCE
T ss_pred HHHHHhcCCCce-----EEEEecCCCHHHHHHHHHHHcCCCEEEECCCC
Confidence 445566676543 22334444556889999999999999999764
No 469
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=24.13 E-value=46 Score=25.43 Aligned_cols=48 Identities=19% Similarity=0.149 Sum_probs=35.1
Q ss_pred CCCCchHHhhhhcEEEEEeecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 103 VGYGFADELKRAWFCVRNVRFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 103 vgygLa~eLrRAGv~Vr~V~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
.+|-|+..|+.+|+.|.. ...|.||....+.|+.|-+.+..-|++..+
T Consensus 28 n~~~l~~~l~~~G~~v~~-----~~iv~Dd~~i~~al~~a~~~~~DlVittGG 75 (164)
T 3pzy_A 28 CGPIITEWLAQQGFSSAQ-----PEVVADGSPVGEALRKAIDDDVDVILTSGG 75 (164)
T ss_dssp HHHHHHHHHHHTTCEECC-----CEEECSSHHHHHHHHHHHHTTCSEEEEESC
T ss_pred HHHHHHHHHHHCCCEEEE-----EEEeCCHHHHHHHHHHHHhCCCCEEEECCC
Confidence 367789999999987643 347889966778888887656777776543
No 470
>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}
Probab=24.11 E-value=23 Score=28.21 Aligned_cols=18 Identities=22% Similarity=0.381 Sum_probs=15.2
Q ss_pred cCCCcCChhHHHHHHHhh
Q 037201 52 NQGRFYNNDKLVNHFRQI 69 (177)
Q Consensus 52 CGrrf~t~~~L~kHFkql 69 (177)
=|..|.|-++|++|||+|
T Consensus 160 ~~~~f~sl~~L~~~fK~~ 177 (178)
T 2xp1_A 160 NNSTFKDIDSFVAYRKRL 177 (178)
T ss_dssp TTEEESSHHHHHHHHHC-
T ss_pred cCcCCcCHHHHHHHHhhc
Confidence 366899999999999987
No 471
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=24.08 E-value=96 Score=23.66 Aligned_cols=45 Identities=9% Similarity=0.054 Sum_probs=29.1
Q ss_pred hHHhhhhcEEEEEeecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 108 ADELKRAWFCVRNVRFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 108 a~eLrRAGv~Vr~V~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
...|+..|+.+-.+.... -.+..+|...++.|.+-|.++|++.-+
T Consensus 69 ~~~l~~~gl~i~~~~~~~---~~~~~~~~~~i~~A~~lGa~~v~~~~~ 113 (262)
T 3p6l_A 69 KELAASKGIKIVGTGVYV---AEKSSDWEKMFKFAKAMDLEFITCEPA 113 (262)
T ss_dssp HHHHHHTTCEEEEEEEEC---CSSTTHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHcCCeEEEEeccC---CccHHHHHHHHHHHHHcCCCEEEecCC
Confidence 345667777665553221 134557888888888888888888643
No 472
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=23.90 E-value=45 Score=28.37 Aligned_cols=35 Identities=11% Similarity=0.115 Sum_probs=31.8
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecCC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
..++++...+..|...+++.|++.++.-+++|.++
T Consensus 54 ~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGs 88 (322)
T 3tx1_A 54 AADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGS 88 (322)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCT
T ss_pred eeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCcc
Confidence 45788899999999999999999999999999886
No 473
>3knz_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 2.50A {Salmonella enterica subsp}
Probab=23.80 E-value=69 Score=27.33 Aligned_cols=35 Identities=9% Similarity=-0.031 Sum_probs=27.8
Q ss_pred ecceEEEEeCCC-chHHHHHHHHHcCccEEEEecCC
Q 037201 122 RFGCLMVVSDDS-NFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 122 ~v~clvLVSDds-df~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
+...+++++++. .+.+++++.+++|-+.++|++..
T Consensus 272 ~~pvi~~~~~~~~~~~~~~~~l~~~g~~vi~i~~~~ 307 (366)
T 3knz_A 272 QSALIMLDPQPDARQDRLAQILGEWTPSIYRIGPQV 307 (366)
T ss_dssp TEEEEEECSSCCHHHHHHHHHHHHHCSCEEEEESSS
T ss_pred CceEEEEecCchHHHHHHHHHHHHcCCeEEEEecCC
Confidence 566677777664 46789999999999999999864
No 474
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=23.64 E-value=80 Score=25.23 Aligned_cols=19 Identities=21% Similarity=0.085 Sum_probs=0.0
Q ss_pred HHHHHHHhcccceeeehhh
Q 037201 7 VELKKLISSFEVVKYMVAN 25 (177)
Q Consensus 7 ~~Lr~~A~~FG~Vv~~~Ay 25 (177)
+.++++|+..|.=+..+-.
T Consensus 4 ~ti~diA~~aGVS~~TVSr 22 (349)
T 1jye_A 4 VTLYDVAEYAGVSYQTVSR 22 (349)
T ss_dssp -------------------
T ss_pred CCHHHHHHHhCCCHHHHHH
Confidence 4578888888875554433
No 475
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=23.36 E-value=68 Score=23.45 Aligned_cols=30 Identities=3% Similarity=0.063 Sum_probs=20.4
Q ss_pred cceEEEEeCCCchHHHHHHHHHcCccEEEEecCC
Q 037201 123 FGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 123 v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
+|.+++.|.+ +|.++ .++-+++.+|+|+..
T Consensus 66 vd~v~~~~~~-~f~~~---~~~l~~~~iv~G~d~ 95 (143)
T 3glv_A 66 VDRAILGHEG-DMMKT---VIEVKPDIITLGYDQ 95 (143)
T ss_dssp CSEEEECCTT-CHHHH---HHHHCCSEEEECTTC
T ss_pred CCEEEEcCch-hHHHH---HHhcCCCEEEECCCC
Confidence 6776665544 57764 456788888888764
No 476
>1ti6_A Pyrogallol hydroxytransferase large subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.52.2.2 c.81.1.1 PDB: 1ti2_A* 1ti4_A* 1vld_M* 1vle_M* 1vlf_M*
Probab=23.22 E-value=78 Score=29.79 Aligned_cols=46 Identities=15% Similarity=0.195 Sum_probs=31.8
Q ss_pred ecceEEEEeCCCchHH----------HHHH-HHHcCccEEEEecCCchhhhhh-hccccc
Q 037201 122 RFGCLMVVSDDSNFVE----------VFQE-ATLRCLKMVVVGDMSDGALKRI-ANAFFS 169 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~----------~lr~-Ar~r~l~TVVVGd~~~~~L~r~-Ad~~~s 169 (177)
..|+||++.-+. -+. .++. |+++|.+.|||.=.- ....+. ||.|++
T Consensus 208 ~ad~il~~G~Np-~~~p~~~~~~~~~~~~~~a~~~G~klivIDPr~-t~ta~~~Ad~~l~ 265 (875)
T 1ti6_A 208 HAEMIVFWSSDP-ETNSGIYAGFESNIRRQWLKDLGVDFVFIDPHM-NHTARLVADKWFS 265 (875)
T ss_dssp HCSEEEEESCCH-HHHCSSSCTTTTHHHHHHHHHTTCEEEEECSBC-CHHHHHHCSEEEC
T ss_pred cCCEEEEECCCh-hhCCccCCCccchHHHHHHHHcCCeEEEECCCC-CCcccccCCEEec
Confidence 467888887664 221 2333 899999999997653 456676 799975
No 477
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=22.90 E-value=1.7e+02 Score=19.20 Aligned_cols=51 Identities=16% Similarity=0.087 Sum_probs=29.8
Q ss_pred chHHhhhhcEEEEEe-------------ecceEEEEeC-------CCchHHHHHHHHH--cCccEEEEecCCc
Q 037201 107 FADELKRAWFCVRNV-------------RFGCLMVVSD-------DSNFVEVFQEATL--RCLKMVVVGDMSD 157 (177)
Q Consensus 107 La~eLrRAGv~Vr~V-------------~v~clvLVSD-------dsdf~~~lr~Ar~--r~l~TVVVGd~~~ 157 (177)
|...|.+.|+.|.++ ..|.+++=.+ +.+=.++++..++ ..+..|++++..+
T Consensus 19 l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 91 (140)
T 2qr3_A 19 VQLLLKNHFSKVITLSSPVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYAD 91 (140)
T ss_dssp HHHHHTTTSSEEEEECCHHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGGG
T ss_pred HHHHHHhCCcEEEEeCCHHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 556666777777666 3454444222 3334466776665 4677888877643
No 478
>1fiz_L Beta-acrosin light chain; anti-parallel beta-barrel, hydrolase; HET: NDG FUL BMA PBZ; 2.90A {Sus scrofa} SCOP: b.47.1.2
Probab=22.69 E-value=21 Score=21.07 Aligned_cols=10 Identities=20% Similarity=-0.021 Sum_probs=8.1
Q ss_pred hcCCCcCChh
Q 037201 51 RNQGRFYNND 60 (177)
Q Consensus 51 ~CGrrf~t~~ 60 (177)
-||.+|+.|.
T Consensus 9 pCGlrfrqn~ 18 (26)
T 1fiz_L 9 PCGLRFRQKL 18 (26)
T ss_pred cccceeccCc
Confidence 3999998774
No 479
>2z6r_A Diphthine synthase; methyltransferase, S-adenosyl-L-methionine, transferase; HET: SAH MES; 1.50A {Pyrococcus horikoshii} PDB: 2dek_A* 1wng_A* 1vce_A* 2ed3_A* 2e4r_A* 2owg_A* 2ek3_A* 2pcm_A* 2p5c_A* 2hut_A* 2emr_A* 2el3_A* 2el0_A* 2ejk_A* 2eld_A* 2el2_A* 2eka_A* 2eh5_A* 2pcg_A* 2el1_A* ...
Probab=22.52 E-value=1.7e+02 Score=23.20 Aligned_cols=47 Identities=11% Similarity=-0.075 Sum_probs=36.3
Q ss_pred ceEEEEeCCCch----HHHHHHHHHcCccEEEEecCCchhhhhhhccccchhh
Q 037201 124 GCLMVVSDDSNF----VEVFQEATLRCLKMVVVGDMSDGALKRIANAFFSWSD 172 (177)
Q Consensus 124 ~clvLVSDdsdf----~~~lr~Ar~r~l~TVVVGd~~~~~L~r~Ad~~~sW~e 172 (177)
+..+|+|-|+-| ..+++.++++|+...||-..+ ....= |-+.+||.+
T Consensus 79 ~V~~l~~GDP~i~~~~~~l~~~l~~~gi~veviPGiS-s~~aa-a~~g~pl~~ 129 (265)
T 2z6r_A 79 DVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPS-IYSAV-GITGLHIYK 129 (265)
T ss_dssp CEEEEESBCTTSSSSTHHHHHHHHHTTCCEEEECCCC-HHHHG-GGGTCCGGG
T ss_pred cEEEEECCCCcCCCCHHHHHHHHHHCCCcEEEECChh-HHHHH-HHhCCCccC
Confidence 456777888765 567888888899999998876 44444 999999975
No 480
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=22.10 E-value=57 Score=24.90 Aligned_cols=55 Identities=13% Similarity=0.048 Sum_probs=30.7
Q ss_pred EEEEEeecceEEEEeCCCchHHHHHH-HHHcCc---cEEEEecC-Cchhhhhhhccccch
Q 037201 116 FCVRNVRFGCLMVVSDDSNFVEVFQE-ATLRCL---KMVVVGDM-SDGALKRIANAFFSW 170 (177)
Q Consensus 116 v~Vr~V~v~clvLVSDdsdf~~~lr~-Ar~r~l---~TVVVGd~-~~~~L~r~Ad~~~sW 170 (177)
+.+-..+..++=++....+=...|+. ++..|+ .+++|||+ +|-...+.|++.+-|
T Consensus 179 ~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam 238 (279)
T 4dw8_A 179 INVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAM 238 (279)
T ss_dssp CEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred EEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEc
Confidence 33333345555566655554554444 445666 48888885 344566666655544
No 481
>3o21_A Glutamate receptor 3; periplasmatic binding protein, oligomerization, membrane, TR protein; HET: NAG; 2.20A {Rattus norvegicus} PDB: 3p3w_A
Probab=22.08 E-value=1.1e+02 Score=24.99 Aligned_cols=27 Identities=0% Similarity=0.028 Sum_probs=18.4
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCcc
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLK 148 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~ 148 (177)
+.|.+++.+...+...+++.|++.|+.
T Consensus 185 ~~~vii~~~~~~~~~~i~~qa~~~g~~ 211 (389)
T 3o21_A 185 QEKRYLIDCEVERINTILEQVVILGKH 211 (389)
T ss_dssp TCCEEEEESCHHHHHHHHHHHHHHCSC
T ss_pred CCeEEEEECCHHHHHHHHHHHHHcCcc
Confidence 456666666666677777777777764
No 482
>1fiw_L Beta-acrosin light chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2
Probab=21.62 E-value=23 Score=20.92 Aligned_cols=10 Identities=30% Similarity=0.238 Sum_probs=8.1
Q ss_pred hcCCCcCChh
Q 037201 51 RNQGRFYNND 60 (177)
Q Consensus 51 ~CGrrf~t~~ 60 (177)
-||.+|+.|.
T Consensus 8 pCGlrfrqn~ 17 (26)
T 1fiw_L 8 PCGVRFRQNR 17 (26)
T ss_pred ccCceeccCc
Confidence 3999998774
No 483
>1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1
Probab=21.39 E-value=1.1e+02 Score=26.26 Aligned_cols=22 Identities=9% Similarity=0.188 Sum_probs=12.9
Q ss_pred CchHHHHHHHHHcCccEE-EEec
Q 037201 133 SNFVEVFQEATLRCLKMV-VVGD 154 (177)
Q Consensus 133 sdf~~~lr~Ar~r~l~TV-VVGd 154 (177)
..+...++.|...|..-+ |||+
T Consensus 369 ~~~~~~~~~a~~~g~~~~iiiG~ 391 (434)
T 1wu7_A 369 RGLSAQLKYASAIGADFAVIFGE 391 (434)
T ss_dssp CCHHHHHHHHHHTTCSEEEEEEH
T ss_pred CCHHHHHHHHHHCCCCEEEEECc
Confidence 356666777776666543 3454
No 484
>4gpa_A Glutamate receptor 4; PBP fold, ligand-gated ION channel, ION transport, transmembrane AMPA receptor regulating proteins, cornichons, ckamp44; HET: NAG; 2.25A {Rattus norvegicus}
Probab=21.28 E-value=74 Score=25.01 Aligned_cols=27 Identities=0% Similarity=-0.016 Sum_probs=22.3
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCcc
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLK 148 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~ 148 (177)
+.+.+|+.+...+...+|+.|++.|+.
T Consensus 184 ~~~vIv~~~~~~~~~~il~~a~~~g~~ 210 (389)
T 4gpa_A 184 QEKKFVIDCEIERLQNILEQIVSVGKH 210 (389)
T ss_dssp TCCEEEEECCHHHHHHHHHHHHHHTCS
T ss_pred CCcEEEEEechhHHHHHHHHHHHhCCC
Confidence 677788888888888888888887764
No 485
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=21.17 E-value=1.4e+02 Score=23.94 Aligned_cols=32 Identities=19% Similarity=0.320 Sum_probs=19.6
Q ss_pred ecceEEEEeCCCchHH-HHHHHHH-cCccEEEEecC
Q 037201 122 RFGCLMVVSDDSNFVE-VFQEATL-RCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~-~lr~Ar~-r~l~TVVVGd~ 155 (177)
++|-||+++-. +.+ +.+.|.+ .++..|+|+..
T Consensus 62 ~~dgIi~~~~~--~~~~~~~~a~~~p~~p~v~id~~ 95 (318)
T 2fqx_A 62 NMGLVVACGSF--LVEAVIETSARFPKQKFLVIDAV 95 (318)
T ss_dssp TCSEEEEESTT--THHHHHHHHHHCTTSCEEEESSC
T ss_pred CCCEEEECChh--HHHHHHHHHHHCCCCEEEEEcCc
Confidence 67888887632 223 4444444 37888888754
No 486
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=21.13 E-value=54 Score=28.51 Aligned_cols=35 Identities=11% Similarity=0.012 Sum_probs=32.2
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecCC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
..++++...+-.|...+++.|++.++.-+|.|.++
T Consensus 38 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh 72 (459)
T 2bvf_A 38 RPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGH 72 (459)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCC
T ss_pred CCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCc
Confidence 46789999999999999999999999999999876
No 487
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=21.08 E-value=53 Score=29.15 Aligned_cols=35 Identities=6% Similarity=0.029 Sum_probs=32.3
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecCC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
..+|+|...+-.|...+++.|++.++.-+|.|.++
T Consensus 42 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh 76 (503)
T 1zr6_A 42 DPAAIAIPRSTEDIAAAVQCGLDAGVQISAKGGGH 76 (503)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCC
T ss_pred CCCEEEEeCCHHHHHHHHHHHHHcCCeEEEECCCc
Confidence 46789999999999999999999999999999876
No 488
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=21.05 E-value=84 Score=25.15 Aligned_cols=33 Identities=12% Similarity=0.021 Sum_probs=23.5
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++|.||+.+.+. -.+.++.+.+.++..|+|+..
T Consensus 128 ~vdGiIi~~~~~-~~~~~~~l~~~~iPvV~i~~~ 160 (366)
T 3h5t_A 128 AVDGVVIYSVAK-GDPHIDAIRARGLPAVIADQP 160 (366)
T ss_dssp CCSCEEEESCCT-TCHHHHHHHHHTCCEEEESSC
T ss_pred CCCEEEEecCCC-ChHHHHHHHHCCCCEEEECCc
Confidence 678888776432 236777778888888888764
No 489
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=21.04 E-value=2.1e+02 Score=21.85 Aligned_cols=46 Identities=7% Similarity=-0.088 Sum_probs=29.6
Q ss_pred chHHhhhhcEEEEEeecceEEEEeCC----CchHHHHHHHHHcCccEEEEec
Q 037201 107 FADELKRAWFCVRNVRFGCLMVVSDD----SNFVEVFQEATLRCLKMVVVGD 154 (177)
Q Consensus 107 La~eLrRAGv~Vr~V~v~clvLVSDd----sdf~~~lr~Ar~r~l~TVVVGd 154 (177)
+...|+..|+.+-..... -+.+++ ..|...|+.|.+-|.++|+|.-
T Consensus 56 ~~~~l~~~gl~i~~~~~~--~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~ 105 (264)
T 1yx1_A 56 LTAAIQLQGLECVFSSPL--ELWREDGQLNPELEPTLRRAEACGAGWLKVSL 105 (264)
T ss_dssp HHHHHHHTTCEEEEEEEE--EEECTTSSBCTTHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHcCCEEEEecch--hhcCCchhHHHHHHHHHHHHHHcCCCEEEEec
Confidence 344566677765433211 233422 6788999999999999998853
No 490
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=21.02 E-value=1.1e+02 Score=29.50 Aligned_cols=38 Identities=13% Similarity=0.008 Sum_probs=27.2
Q ss_pred CCchHHHHHHHHHcCccEEEEecC-Cchhhhhhhccccc
Q 037201 132 DSNFVEVFQEATLRCLKMVVVGDM-SDGALKRIANAFFS 169 (177)
Q Consensus 132 dsdf~~~lr~Ar~r~l~TVVVGd~-~~~~L~r~Ad~~~s 169 (177)
..+-..+++.-++.|-.+..|||+ +|-..-+.||+.+.
T Consensus 682 P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgia 720 (995)
T 3ar4_A 682 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIA 720 (995)
T ss_dssp SSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEE
Confidence 345667777778788889999995 34445567888765
No 491
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=21.00 E-value=83 Score=24.06 Aligned_cols=52 Identities=15% Similarity=0.149 Sum_probs=35.0
Q ss_pred CCCchHHhhhhcEEEEEe--------------------ecceEEEEeCCCch------------------HHHHHHHHHc
Q 037201 104 GYGFADELKRAWFCVRNV--------------------RFGCLMVVSDDSNF------------------VEVFQEATLR 145 (177)
Q Consensus 104 gygLa~eLrRAGv~Vr~V--------------------~v~clvLVSDdsdf------------------~~~lr~Ar~r 145 (177)
|.-++.+|.+.|..|..+ ++|.+|-..-.... ..+++.|++.
T Consensus 18 G~~l~~~L~~~g~~V~~~~r~~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 97 (287)
T 3sc6_A 18 GKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLV 97 (287)
T ss_dssp HHHHHHHSCTTTEEEEEECTTTSCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEecccccCCCCHHHHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHc
Confidence 445677787788877765 47877766543322 3478888888
Q ss_pred CccEEEEecC
Q 037201 146 CLKMVVVGDM 155 (177)
Q Consensus 146 ~l~TVVVGd~ 155 (177)
+++-|.+|-.
T Consensus 98 ~~~~v~~SS~ 107 (287)
T 3sc6_A 98 GAKLVYISTD 107 (287)
T ss_dssp TCEEEEEEEG
T ss_pred CCeEEEEchh
Confidence 8886666643
No 492
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=20.99 E-value=65 Score=23.32 Aligned_cols=31 Identities=16% Similarity=0.318 Sum_probs=26.1
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEE
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVV 152 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVV 152 (177)
++.||||..+..--.++++.|.+.|+--..+
T Consensus 74 ~~~~iIlt~g~~~~~~i~~~A~~~~ipvl~t 104 (139)
T 2ioj_A 74 NVRCLILTGNLEPVQLVLTKAEERGVPVILT 104 (139)
T ss_dssp TEEEEEEETTCCCCHHHHHHHHHHTCCEEEC
T ss_pred CCcEEEEcCCCCCCHHHHHHHHHCCCeEEEE
Confidence 7889999999998999999999998854443
No 493
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=20.79 E-value=61 Score=24.42 Aligned_cols=40 Identities=13% Similarity=0.014 Sum_probs=29.2
Q ss_pred HHhhhhcEEEEEeecceEEE-EeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 109 DELKRAWFCVRNVRFGCLMV-VSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 109 ~eLrRAGv~Vr~V~v~clvL-VSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
..+.+.|. ..+|| |+|..++.++.+.|++.|+-+.+|=|-
T Consensus 41 ~~W~~~G~-------~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DA 81 (123)
T 1rzw_A 41 RKWLDEGQ-------KKVVLKVKSLEELLGIKHKAESLGLVTGLVQDA 81 (123)
T ss_dssp HHTGGGCS-------SEEEEECSCHHHHHHHHHHHHHTTCCEEEECCT
T ss_pred HHHHHCCC-------cEEEEecCCHHHHHHHHHHHHHCCCCEEEEECC
Confidence 45555554 34444 446688999999999999999998775
No 494
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=20.62 E-value=84 Score=21.30 Aligned_cols=28 Identities=7% Similarity=-0.026 Sum_probs=23.8
Q ss_pred chHHHHHHHHHcCccEEEEecCCchhhhh
Q 037201 134 NFVEVFQEATLRCLKMVVVGDMSDGALKR 162 (177)
Q Consensus 134 df~~~lr~Ar~r~l~TVVVGd~~~~~L~r 162 (177)
--..+++.|++.+...||+|-. .+.+++
T Consensus 90 ~~~~I~~~a~~~~~dliV~G~~-~~~~~~ 117 (141)
T 1jmv_A 90 LGQVLSDAIEQYDVDLLVTGHH-QDFWSK 117 (141)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEC-CCCHHH
T ss_pred HHHHHHHHHHhcCCCEEEEeCC-Cchhhh
Confidence 4578999999999999999988 676665
No 495
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=20.59 E-value=54 Score=29.31 Aligned_cols=35 Identities=17% Similarity=0.181 Sum_probs=32.6
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecCC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
..+|+|...+-.|...+++.|++.++.-+|.|.++
T Consensus 55 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGh 89 (521)
T 2ipi_A 55 RPDVVYVVHTADQVVDAVNQAMAAGQRIAVRSGGH 89 (521)
T ss_dssp CCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCC
T ss_pred CCCEEEEcCCHHHHHHHHHHHHHcCCeEEEECCCc
Confidence 46889999999999999999999999999999876
No 496
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=20.52 E-value=58 Score=29.29 Aligned_cols=35 Identities=11% Similarity=0.066 Sum_probs=32.3
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCccEEEEecCC
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLKMVVVGDMS 156 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~~ 156 (177)
..+|++..++-.|...+++.|++.++.-+|.|.+.
T Consensus 58 ~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh 92 (530)
T 2y3s_A 58 DPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGH 92 (530)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCC
T ss_pred CCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCC
Confidence 46789999999999999999999999999999875
No 497
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=20.46 E-value=1.6e+02 Score=19.04 Aligned_cols=30 Identities=17% Similarity=0.015 Sum_probs=26.1
Q ss_pred EEEEeCCCchHHHHHHHHHcCccEEEEecC
Q 037201 126 LMVVSDDSNFVEVFQEATLRCLKMVVVGDM 155 (177)
Q Consensus 126 lvLVSDdsdf~~~lr~Ar~r~l~TVVVGd~ 155 (177)
++.|+-|....+.++.-++.+++.++|=|.
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~ 31 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG 31 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 467888999999999999999999988664
No 498
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=20.16 E-value=45 Score=24.54 Aligned_cols=26 Identities=8% Similarity=0.180 Sum_probs=21.4
Q ss_pred hhhhhhcCCCcCChhHHHHHHH-hhhh
Q 037201 46 NCLLIRNQGRFYNNDKLVNHFR-QIHE 71 (177)
Q Consensus 46 ~~Lc~~CGrrf~t~~~L~kHFk-qlHe 71 (177)
...|.+|+-.|.+...+..|++ ..|.
T Consensus 32 ~~~C~~C~v~~~S~s~~~~H~~gkkH~ 58 (127)
T 1zu1_A 32 DTQCKVCSAVLISESQKLAHYQSRKHA 58 (127)
T ss_dssp SSEETTTTEECCSHHHHHHHHHCHHHH
T ss_pred CCcCcCCCCEeCCHHHHHHHHCcHHHH
Confidence 3449999999999999999996 3454
No 499
>3qek_A NMDA glutamate receptor subunit; amino terminal domain, ION channel, NMDA receptor, allosteri modulation, phenylethanolamine, polyamine; HET: NAG BMA; 2.00A {Xenopus laevis} PDB: 3qel_A* 3qem_A* 3q41_A*
Probab=20.14 E-value=80 Score=25.40 Aligned_cols=27 Identities=7% Similarity=0.266 Sum_probs=16.0
Q ss_pred ecceEEEEeCCCchHHHHHHHHHcCcc
Q 037201 122 RFGCLMVVSDDSNFVEVFQEATLRCLK 148 (177)
Q Consensus 122 ~v~clvLVSDdsdf~~~lr~Ar~r~l~ 148 (177)
+.+.+++.++..+...+++.|++.|+.
T Consensus 215 ~~~vii~~~~~~~~~~~~~~a~~~g~~ 241 (384)
T 3qek_A 215 EARVIILSASEDDATAVYKSAAMLDMT 241 (384)
T ss_dssp SCCEEEEECCHHHHHHHHHHHHHTTCS
T ss_pred CCcEEEEECCHHHHHHHHHHHHHcCCc
Confidence 455555555555666666666666654
No 500
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=20.12 E-value=62 Score=24.37 Aligned_cols=47 Identities=9% Similarity=0.073 Sum_probs=27.5
Q ss_pred ceEEEEeCCCchHH-HHHHHHHcCc---cEEEEecC-Cchhhhhhhccccch
Q 037201 124 GCLMVVSDDSNFVE-VFQEATLRCL---KMVVVGDM-SDGALKRIANAFFSW 170 (177)
Q Consensus 124 ~clvLVSDdsdf~~-~lr~Ar~r~l---~TVVVGd~-~~~~L~r~Ad~~~sW 170 (177)
.++=++....+=.. +.+.+...|+ .+++|||+ +|-...+.|...+-|
T Consensus 190 ~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam 241 (274)
T 3fzq_A 190 QYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAM 241 (274)
T ss_dssp TEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEE
T ss_pred ceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEe
Confidence 45545555444444 4444555666 48999995 344666667665554
Done!