BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 037204
         (160 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9UPP5|K1107_HUMAN Uncharacterized protein KIAA1107 OS=Homo sapiens GN=KIAA1107 PE=1
           SV=2
          Length = 1409

 Score = 33.1 bits (74), Expect = 0.78,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%)

Query: 57  PRLDDPSTDAFESCSSDTFEIRG--PCAYQICYVYLYRTGPDGWKPESVKIYGANSR 111
           PR +D   DA  S   D    RG   C   +C+ +L R+  D   PE +KIY +N R
Sbjct: 881 PRSED--YDAGGSQDDDGSNDRGISKCGTMLCHDFLGRSSSDTSTPEELKIYDSNLR 935


>sp|Q9HCE1|MOV10_HUMAN Putative helicase MOV-10 OS=Homo sapiens GN=MOV10 PE=1 SV=2
          Length = 1003

 Score = 31.2 bits (69), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 85  ICYVYLYRTGPDGWKPESVKIYGANSRAVSFYYNTFIPSDIWYGFNLCRSASSAHQQHVP 144
           + Y  LY+ GPDG+ P+ +     N R+     +  IP+ ++Y   L   A    ++   
Sbjct: 707 LTYNSLYKKGPDGYDPQFITKLLRNYRSHPTILD--IPNQLYYEGELQACADVVDRERFC 764

Query: 145 RWS 147
           RW+
Sbjct: 765 RWA 767


>sp|A7I7S4|SYA_METB6 Alanine--tRNA ligase OS=Methanoregula boonei (strain 6A8) GN=alaS
          PE=3 SV=1
          Length = 914

 Score = 30.8 bits (68), Expect = 4.0,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 10/68 (14%)

Query: 9  ESFNVSYIQNLGSCSYTVVITTSCSSSKYTRDQISIAFGDA-------YGNQIYAPRLDD 61
          E + + Y +  G   +T  I  SC S+ +TRD      GDA        G+ ++AP   D
Sbjct: 4  EEYQLDYFKEQG---FTRKICKSCGSAFWTRDSSREDCGDAPCVPYSFIGSPVFAPHTVD 60

Query: 62 PSTDAFES 69
             +AF S
Sbjct: 61 EMREAFLS 68


>sp|Q24114|DALY_DROME Division abnormally delayed protein OS=Drosophila melanogaster
           GN=dally PE=1 SV=1
          Length = 626

 Score = 30.4 bits (67), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 24  YTVVITTSCSSSKYTRDQISIAFGDAYGNQIYAPRLDDPSTDA 66
           YT ++   C   +++RD  S   GD +G+  Y   L +P TD+
Sbjct: 454 YTTIVDNFCDEQQHSRDDHSCWSGDRFGD--YTQLLINPGTDS 494


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.322    0.136    0.436 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,687,457
Number of Sequences: 539616
Number of extensions: 2353948
Number of successful extensions: 3822
Number of sequences better than 100.0: 5
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 3822
Number of HSP's gapped (non-prelim): 5
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)