Query 037206
Match_columns 149
No_of_seqs 157 out of 1231
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 09:47:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037206.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037206hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1515 Arylacetamide deacetyl 100.0 3.6E-32 7.8E-37 204.7 15.4 146 1-146 103-335 (336)
2 PRK10162 acetyl esterase; Prov 99.9 1E-26 2.3E-31 175.5 14.0 144 5-148 96-317 (318)
3 COG0657 Aes Esterase/lipase [L 99.9 3.1E-26 6.8E-31 172.3 13.6 139 4-146 93-310 (312)
4 PF07859 Abhydrolase_3: alpha/ 99.9 2.8E-24 6E-29 153.0 9.5 83 4-88 12-112 (211)
5 KOG4388 Hormone-sensitive lipa 99.8 2.2E-19 4.7E-24 140.8 7.6 82 5-88 411-510 (880)
6 PF00326 Peptidase_S9: Prolyl 99.6 7.8E-15 1.7E-19 104.7 10.8 129 9-148 3-211 (213)
7 PF01738 DLH: Dienelactone hyd 99.5 4.4E-13 9.5E-18 96.1 9.5 135 5-147 26-218 (218)
8 PF10340 DUF2424: Protein of u 99.5 5.9E-13 1.3E-17 101.5 9.7 68 21-89 154-238 (374)
9 COG0412 Dienelactone hydrolase 99.4 1.1E-11 2.4E-16 90.1 11.2 136 5-148 39-235 (236)
10 KOG4627 Kynurenine formamidase 99.3 2.1E-12 4.5E-17 90.6 3.0 69 17-90 93-176 (270)
11 TIGR02821 fghA_ester_D S-formy 99.1 2.4E-09 5.2E-14 79.5 12.5 90 44-146 137-274 (275)
12 PF12695 Abhydrolase_5: Alpha/ 99.1 1.3E-09 2.9E-14 72.5 9.9 107 5-121 11-145 (145)
13 COG1506 DAP2 Dipeptidyl aminop 99.1 9.2E-10 2E-14 90.1 9.3 129 8-148 411-618 (620)
14 KOG1455 Lysophospholipase [Lip 98.9 1.1E-08 2.3E-13 75.8 9.7 81 4-91 66-169 (313)
15 PHA02857 monoglyceride lipase; 98.8 2.3E-07 5E-12 68.3 13.6 76 5-87 37-133 (276)
16 PRK10566 esterase; Provisional 98.8 5.4E-08 1.2E-12 70.7 9.8 57 8-65 42-127 (249)
17 PF02230 Abhydrolase_2: Phosph 98.8 7.7E-08 1.7E-12 68.9 9.8 88 44-146 104-215 (216)
18 PLN02385 hydrolase; alpha/beta 98.8 4E-07 8.7E-12 69.6 14.0 70 9-85 104-196 (349)
19 PLN02442 S-formylglutathione h 98.8 1.8E-07 3.9E-12 69.8 11.7 91 44-147 142-281 (283)
20 PLN02298 hydrolase, alpha/beta 98.7 7.9E-07 1.7E-11 67.4 14.2 72 8-86 75-169 (330)
21 PRK05077 frsA fermentation/res 98.7 8.5E-07 1.8E-11 69.6 12.7 73 8-87 210-301 (414)
22 KOG2100 Dipeptidyl aminopeptid 98.6 2.4E-07 5.2E-12 77.4 9.8 133 7-148 544-749 (755)
23 PRK10115 protease 2; Provision 98.6 5.4E-07 1.2E-11 74.8 11.1 78 5-89 459-562 (686)
24 PLN00021 chlorophyllase 98.6 2.4E-07 5.2E-12 70.1 8.2 81 6-88 65-168 (313)
25 PRK10749 lysophospholipase L2; 98.6 3E-06 6.5E-11 64.4 13.7 73 7-86 68-166 (330)
26 PRK11460 putative hydrolase; P 98.6 3.1E-07 6.8E-12 66.6 7.7 73 44-122 102-193 (232)
27 PF08840 BAAT_C: BAAT / Acyl-C 98.6 2.7E-07 5.9E-12 66.2 7.2 34 44-84 21-54 (213)
28 PF12740 Chlorophyllase2: Chlo 98.6 2.9E-07 6.2E-12 67.5 7.2 79 6-86 30-131 (259)
29 TIGR03101 hydr2_PEP hydrolase, 98.6 1.6E-06 3.4E-11 64.3 11.1 73 9-88 45-136 (266)
30 COG2272 PnbA Carboxylesterase 98.5 4.6E-08 1E-12 76.7 2.2 81 1-87 107-218 (491)
31 cd00312 Esterase_lipase Estera 98.5 7.8E-08 1.7E-12 76.7 3.4 71 13-87 116-214 (493)
32 COG1647 Esterase/lipase [Gener 98.5 6.4E-06 1.4E-10 58.8 12.4 76 4-88 26-120 (243)
33 TIGR03695 menH_SHCHC 2-succiny 98.5 4E-06 8.6E-11 59.4 11.6 72 5-84 13-103 (251)
34 PF00135 COesterase: Carboxyle 98.5 6E-07 1.3E-11 71.9 7.5 67 15-85 150-244 (535)
35 PLN02652 hydrolase; alpha/beta 98.4 1E-05 2.2E-10 63.2 13.3 76 7-87 150-246 (395)
36 KOG3043 Predicted hydrolase re 98.3 4.5E-07 9.8E-12 64.7 3.6 130 10-147 57-241 (242)
37 PF05728 UPF0227: Uncharacteri 98.3 5.5E-06 1.2E-10 58.3 8.9 77 3-88 11-93 (187)
38 PRK10673 acyl-CoA esterase; Pr 98.3 2.6E-05 5.7E-10 56.4 12.4 69 6-82 29-112 (255)
39 cd00707 Pancreat_lipase_like P 98.3 4.7E-06 1E-10 62.0 7.7 72 9-86 54-147 (275)
40 PF12697 Abhydrolase_6: Alpha/ 98.2 1.5E-05 3.3E-10 55.6 9.0 75 6-88 11-103 (228)
41 PLN02824 hydrolase, alpha/beta 98.2 0.00011 2.3E-09 54.7 13.0 72 6-85 42-136 (294)
42 COG2945 Predicted hydrolase of 98.2 4.8E-05 1E-09 53.3 10.2 129 2-144 42-205 (210)
43 PRK10985 putative hydrolase; P 98.1 2.7E-05 5.9E-10 59.1 8.7 75 9-88 76-170 (324)
44 COG2267 PldB Lysophospholipase 98.1 2.5E-05 5.3E-10 58.9 8.2 77 6-89 47-145 (298)
45 KOG2281 Dipeptidyl aminopeptid 98.1 2.5E-05 5.4E-10 63.5 8.3 121 14-145 670-866 (867)
46 PRK14875 acetoin dehydrogenase 98.0 0.00018 3.9E-09 55.0 12.6 72 6-85 144-231 (371)
47 KOG1552 Predicted alpha/beta h 98.0 7.1E-05 1.5E-09 54.6 8.7 121 8-144 75-250 (258)
48 PRK13604 luxD acyl transferase 97.9 4.9E-05 1.1E-09 57.3 7.6 71 8-87 52-142 (307)
49 TIGR03100 hydr1_PEP hydrolase, 97.9 7.3E-05 1.6E-09 55.5 8.6 74 7-88 44-136 (274)
50 TIGR01836 PHA_synth_III_C poly 97.9 2.8E-05 6.1E-10 59.6 6.5 74 9-89 83-174 (350)
51 COG0400 Predicted esterase [Ge 97.9 3.3E-05 7.1E-10 55.2 6.3 87 44-146 98-205 (207)
52 PRK11071 esterase YqiA; Provis 97.9 0.0003 6.5E-09 49.5 10.7 66 13-87 23-94 (190)
53 TIGR01840 esterase_phb esteras 97.9 7.4E-05 1.6E-09 53.3 7.4 68 13-86 35-130 (212)
54 PF05448 AXE1: Acetyl xylan es 97.9 0.0008 1.7E-08 51.2 13.2 38 44-88 174-211 (320)
55 PF03403 PAF-AH_p_II: Platelet 97.9 0.00025 5.4E-09 55.2 10.6 98 44-148 227-360 (379)
56 PF00975 Thioesterase: Thioest 97.8 8.9E-05 1.9E-09 53.1 7.2 79 2-84 9-102 (229)
57 PLN02511 hydrolase 97.8 0.00025 5.4E-09 55.3 9.0 73 10-87 119-211 (388)
58 PRK00870 haloalkane dehalogena 97.7 0.00021 4.6E-09 53.4 8.1 72 6-84 59-148 (302)
59 TIGR03611 RutD pyrimidine util 97.7 0.00016 3.5E-09 51.7 7.2 70 8-85 28-114 (257)
60 TIGR01250 pro_imino_pep_2 prol 97.7 0.00031 6.7E-09 51.0 8.6 75 5-85 37-130 (288)
61 PLN02965 Probable pheophorbida 97.7 0.00022 4.8E-09 52.0 7.7 72 6-84 16-105 (255)
62 PLN02894 hydrolase, alpha/beta 97.7 0.00024 5.1E-09 55.7 7.9 71 7-85 119-210 (402)
63 KOG4409 Predicted hydrolase/ac 97.7 0.0012 2.6E-08 50.4 11.1 67 14-88 111-197 (365)
64 PRK03592 haloalkane dehalogena 97.7 0.0003 6.4E-09 52.3 7.9 72 6-85 40-127 (295)
65 TIGR03056 bchO_mg_che_rel puta 97.6 0.00028 6E-09 51.4 7.5 72 5-84 40-128 (278)
66 TIGR02240 PHA_depoly_arom poly 97.6 0.00027 5.9E-09 52.1 7.3 71 7-85 39-125 (276)
67 PF12715 Abhydrolase_7: Abhydr 97.6 0.0002 4.4E-09 55.3 6.5 56 9-65 149-246 (390)
68 TIGR02427 protocat_pcaD 3-oxoa 97.6 0.00015 3.3E-09 51.3 5.3 57 8-66 28-100 (251)
69 TIGR03343 biphenyl_bphD 2-hydr 97.6 0.00033 7.2E-09 51.4 7.0 66 12-84 52-134 (282)
70 TIGR03230 lipo_lipase lipoprot 97.5 0.00059 1.3E-08 54.0 8.2 68 12-85 63-153 (442)
71 TIGR01738 bioH putative pimelo 97.5 0.00049 1.1E-08 48.6 7.1 71 6-84 17-98 (245)
72 PF07224 Chlorophyllase: Chlor 97.5 0.00024 5.2E-09 52.3 5.4 76 6-86 59-157 (307)
73 KOG1454 Predicted hydrolase/ac 97.5 0.0026 5.7E-08 48.6 11.1 64 5-68 70-151 (326)
74 PLN02578 hydrolase 97.5 0.00076 1.6E-08 51.8 8.3 70 7-84 100-185 (354)
75 PLN02211 methyl indole-3-aceta 97.5 0.00074 1.6E-08 50.1 7.8 73 6-85 31-121 (273)
76 PRK11126 2-succinyl-6-hydroxy- 97.5 0.00074 1.6E-08 48.4 7.7 72 6-85 15-101 (242)
77 PF06821 Ser_hydrolase: Serine 97.5 0.0014 3E-08 45.5 8.4 72 3-87 10-92 (171)
78 PRK10349 carboxylesterase BioH 97.4 0.0012 2.5E-08 48.0 8.2 70 7-84 27-107 (256)
79 PRK03204 haloalkane dehalogena 97.4 0.0011 2.3E-08 49.4 8.1 71 7-85 48-135 (286)
80 KOG1516 Carboxylesterase and r 97.4 0.00011 2.4E-09 59.5 2.9 48 17-64 140-214 (545)
81 TIGR01838 PHA_synth_I poly(R)- 97.4 0.00085 1.8E-08 54.4 7.7 81 9-91 209-307 (532)
82 PF06500 DUF1100: Alpha/beta h 97.4 0.00073 1.6E-08 52.8 6.7 74 8-88 205-298 (411)
83 PRK04940 hypothetical protein; 97.3 0.00053 1.2E-08 47.8 5.3 85 45-145 60-179 (180)
84 KOG2564 Predicted acetyltransf 97.3 0.00068 1.5E-08 50.4 6.0 59 8-66 89-167 (343)
85 KOG3847 Phospholipase A2 (plat 97.3 0.0028 6E-08 47.9 9.1 26 4-30 129-154 (399)
86 PRK10439 enterobactin/ferric e 97.3 0.00087 1.9E-08 52.7 6.2 75 44-125 287-395 (411)
87 KOG2112 Lysophospholipase [Lip 97.2 0.00087 1.9E-08 47.5 5.5 87 44-145 92-203 (206)
88 COG2382 Fes Enterochelin ester 97.2 0.00045 9.7E-09 51.6 4.2 77 44-127 176-286 (299)
89 PF03583 LIP: Secretory lipase 97.2 0.0015 3.4E-08 49.0 7.2 81 6-89 12-116 (290)
90 KOG4391 Predicted alpha/beta h 97.2 0.00053 1.1E-08 49.3 4.3 72 11-88 96-186 (300)
91 COG3571 Predicted hydrolase of 97.2 0.0059 1.3E-07 42.0 9.0 136 2-145 25-210 (213)
92 PLN02679 hydrolase, alpha/beta 97.2 0.0021 4.6E-08 49.5 7.8 71 7-84 102-189 (360)
93 PRK05371 x-prolyl-dipeptidyl a 97.2 0.013 2.8E-07 49.8 12.6 54 11-65 270-358 (767)
94 TIGR00976 /NonD putative hydro 97.1 0.0013 2.9E-08 53.5 6.4 70 12-88 45-134 (550)
95 PF06342 DUF1057: Alpha/beta h 97.1 0.016 3.5E-07 43.2 11.3 76 2-85 43-136 (297)
96 KOG1838 Alpha/beta hydrolase [ 97.1 0.0045 9.8E-08 48.3 8.8 81 3-86 136-236 (409)
97 PF10503 Esterase_phd: Esteras 97.1 0.0022 4.7E-08 46.3 6.6 66 14-85 39-131 (220)
98 PF10230 DUF2305: Uncharacteri 97.1 0.0054 1.2E-07 45.5 8.8 84 6-92 15-128 (266)
99 TIGR01249 pro_imino_pep_1 prol 97.1 0.0016 3.5E-08 48.9 6.2 68 11-85 44-129 (306)
100 TIGR01839 PHA_synth_II poly(R) 97.0 0.003 6.4E-08 51.4 7.2 80 9-91 236-333 (560)
101 COG3509 LpqC Poly(3-hydroxybut 97.0 0.005 1.1E-07 46.1 7.7 55 14-68 84-167 (312)
102 TIGR01607 PST-A Plasmodium sub 97.0 0.0038 8.2E-08 47.7 7.2 76 10-86 64-185 (332)
103 PF00561 Abhydrolase_1: alpha/ 96.9 0.0035 7.5E-08 44.1 6.3 58 22-85 1-78 (230)
104 KOG4389 Acetylcholinesterase/B 96.9 0.00046 1E-08 54.7 1.7 54 2-57 149-230 (601)
105 PLN03087 BODYGUARD 1 domain co 96.8 0.01 2.2E-07 47.7 8.6 66 14-85 223-308 (481)
106 PRK08775 homoserine O-acetyltr 96.8 0.0035 7.6E-08 47.9 5.8 59 21-85 99-172 (343)
107 KOG3101 Esterase D [General fu 96.7 0.0021 4.5E-08 46.1 3.7 22 44-65 140-161 (283)
108 PF00151 Lipase: Lipase; Inte 96.6 0.0036 7.9E-08 47.9 4.7 82 6-88 87-192 (331)
109 KOG3975 Uncharacterized conser 96.6 0.033 7.1E-07 41.0 9.2 79 4-86 40-147 (301)
110 PF06057 VirJ: Bacterial virul 96.6 0.0034 7.3E-08 44.2 3.9 81 2-85 10-106 (192)
111 COG3458 Acetyl esterase (deace 96.4 0.0031 6.7E-08 46.8 3.1 39 44-89 175-213 (321)
112 PF01764 Lipase_3: Lipase (cla 96.4 0.0073 1.6E-07 39.8 4.8 43 44-86 63-106 (140)
113 cd00741 Lipase Lipase. Lipase 96.4 0.0067 1.5E-07 40.9 4.6 41 44-86 27-67 (153)
114 PLN03084 alpha/beta hydrolase 96.3 0.025 5.3E-07 44.3 7.7 72 7-86 141-232 (383)
115 TIGR01392 homoserO_Ac_trn homo 96.2 0.011 2.4E-07 45.3 5.2 36 44-85 125-161 (351)
116 PF07819 PGAP1: PGAP1-like pro 96.1 0.078 1.7E-06 38.4 9.1 79 4-85 15-122 (225)
117 PF02129 Peptidase_S15: X-Pro 96.1 0.023 4.9E-07 42.1 6.2 68 16-90 53-140 (272)
118 PF02450 LCAT: Lecithin:choles 96.0 0.02 4.3E-07 44.8 6.0 82 8-90 66-164 (389)
119 COG0429 Predicted hydrolase of 96.0 0.052 1.1E-06 41.4 7.7 57 6-63 90-166 (345)
120 KOG2382 Predicted alpha/beta h 96.0 0.018 3.9E-07 43.6 5.3 62 2-65 63-144 (315)
121 PF00756 Esterase: Putative es 95.9 0.015 3.2E-07 42.2 4.5 40 44-89 114-153 (251)
122 PRK06489 hypothetical protein; 95.9 0.025 5.4E-07 43.6 6.0 59 20-84 104-187 (360)
123 PF11187 DUF2974: Protein of u 95.9 0.01 2.2E-07 43.0 3.5 38 44-83 83-120 (224)
124 COG1770 PtrB Protease II [Amin 95.8 0.0073 1.6E-07 49.6 2.8 39 44-88 526-564 (682)
125 PLN02733 phosphatidylcholine-s 95.8 0.024 5.3E-07 45.1 5.4 80 5-90 106-205 (440)
126 COG0627 Predicted esterase [Ge 95.7 0.02 4.3E-07 43.6 4.7 42 99-147 270-312 (316)
127 PRK07868 acyl-CoA synthetase; 95.6 0.051 1.1E-06 47.5 7.1 70 12-87 91-178 (994)
128 COG3150 Predicted esterase [Ge 95.5 0.039 8.5E-07 38.2 4.9 49 20-68 24-82 (191)
129 COG4757 Predicted alpha/beta h 95.4 0.024 5.2E-07 41.3 3.8 58 7-65 44-125 (281)
130 PF05677 DUF818: Chlamydia CHL 95.4 0.047 1E-06 41.9 5.5 54 12-65 162-235 (365)
131 PLN02872 triacylglycerol lipas 95.3 0.0075 1.6E-07 47.3 1.1 53 10-63 97-178 (395)
132 cd00519 Lipase_3 Lipase (class 95.2 0.03 6.6E-07 40.3 4.0 42 44-86 127-168 (229)
133 KOG4178 Soluble epoxide hydrol 95.2 0.088 1.9E-06 40.1 6.4 68 9-83 60-145 (322)
134 KOG4667 Predicted esterase [Li 95.1 0.17 3.6E-06 36.7 7.3 58 10-68 52-128 (269)
135 PF08538 DUF1749: Protein of u 95.1 0.043 9.3E-07 41.5 4.5 80 9-90 52-152 (303)
136 PRK07581 hypothetical protein; 95.0 0.051 1.1E-06 41.3 4.8 35 44-84 122-157 (339)
137 PLN02980 2-oxoglutarate decarb 94.9 0.15 3.2E-06 47.0 8.3 70 7-84 1385-1478(1655)
138 TIGR01849 PHB_depoly_PhaZ poly 94.9 0.15 3.3E-06 40.2 7.4 79 10-91 120-213 (406)
139 PF07082 DUF1350: Protein of u 94.6 0.11 2.4E-06 38.1 5.6 65 1-66 28-111 (250)
140 PF05577 Peptidase_S28: Serine 94.5 0.24 5.1E-06 39.2 7.6 72 11-88 49-150 (434)
141 PF03959 FSH1: Serine hydrolas 94.4 0.053 1.2E-06 38.7 3.6 42 46-87 103-146 (212)
142 KOG2984 Predicted hydrolase [G 94.1 0.096 2.1E-06 37.6 4.2 57 11-67 61-136 (277)
143 PLN02454 triacylglycerol lipas 93.9 0.098 2.1E-06 41.2 4.2 40 46-85 229-270 (414)
144 COG3319 Thioesterase domains o 93.8 0.26 5.6E-06 36.5 6.2 65 4-70 11-90 (257)
145 PRK05855 short chain dehydroge 93.7 0.23 5E-06 40.2 6.4 57 7-65 39-114 (582)
146 PF09752 DUF2048: Uncharacteri 93.6 0.22 4.7E-06 38.4 5.6 54 12-66 113-196 (348)
147 COG3208 GrsT Predicted thioest 93.3 0.21 4.6E-06 36.5 4.9 72 4-80 18-106 (244)
148 PLN02408 phospholipase A1 92.9 0.15 3.3E-06 39.6 3.8 24 46-69 201-224 (365)
149 KOG4569 Predicted lipase [Lipi 92.8 0.18 3.9E-06 38.8 4.2 28 44-71 170-197 (336)
150 COG4188 Predicted dienelactone 92.6 0.32 6.8E-06 37.7 5.2 57 6-63 84-177 (365)
151 PLN02847 triacylglycerol lipas 92.6 0.21 4.6E-06 41.1 4.4 38 45-84 251-288 (633)
152 COG4947 Uncharacterized protei 92.5 0.0083 1.8E-07 41.7 -3.0 44 40-89 92-139 (227)
153 TIGR03502 lipase_Pla1_cef extr 92.5 0.51 1.1E-05 40.4 6.7 60 7-67 463-577 (792)
154 COG1505 Serine proteases of th 92.4 0.087 1.9E-06 43.2 2.0 132 6-147 436-647 (648)
155 COG4099 Predicted peptidase [G 92.4 0.17 3.8E-06 38.3 3.4 38 44-87 268-305 (387)
156 KOG2551 Phospholipase/carboxyh 92.1 0.92 2E-05 32.8 6.6 41 48-88 107-149 (230)
157 KOG3253 Predicted alpha/beta h 92.0 0.37 8.1E-06 39.8 5.1 95 44-145 249-377 (784)
158 PRK00175 metX homoserine O-ace 92.0 0.22 4.7E-06 38.8 3.8 35 44-84 145-180 (379)
159 COG3243 PhaC Poly(3-hydroxyalk 92.0 0.32 6.9E-06 38.5 4.5 75 9-90 128-221 (445)
160 PF05990 DUF900: Alpha/beta hy 91.9 0.55 1.2E-05 34.2 5.6 46 44-89 92-140 (233)
161 PTZ00472 serine carboxypeptida 91.8 0.22 4.7E-06 40.0 3.6 47 44-90 170-220 (462)
162 PLN02802 triacylglycerol lipas 91.7 0.24 5.2E-06 40.0 3.8 24 46-69 331-354 (509)
163 PLN02571 triacylglycerol lipas 91.3 0.31 6.6E-06 38.5 3.9 24 46-69 227-250 (413)
164 PF03096 Ndr: Ndr family; Int 91.1 1.3 2.9E-05 33.3 6.9 62 21-88 55-136 (283)
165 PF00450 Peptidase_S10: Serine 91.1 0.34 7.3E-06 37.8 4.0 46 44-89 135-184 (415)
166 KOG2237 Predicted serine prote 91.0 0.54 1.2E-05 39.1 5.1 39 44-88 548-586 (712)
167 smart00824 PKS_TE Thioesterase 91.0 1.4 3E-05 30.2 6.7 74 5-83 11-99 (212)
168 COG0596 MhpC Predicted hydrola 90.9 0.33 7.1E-06 33.7 3.5 59 22-86 51-123 (282)
169 PF01083 Cutinase: Cutinase; 90.9 0.5 1.1E-05 33.0 4.3 71 12-84 27-120 (179)
170 PF12048 DUF3530: Protein of u 90.9 3.6 7.9E-05 31.3 9.3 92 44-146 192-309 (310)
171 PLN00413 triacylglycerol lipas 90.5 0.26 5.6E-06 39.5 2.9 24 44-67 283-306 (479)
172 COG3545 Predicted esterase of 90.4 0.58 1.3E-05 32.7 4.2 42 39-86 44-94 (181)
173 PLN03037 lipase class 3 family 90.1 0.48 1E-05 38.4 4.1 23 46-68 319-341 (525)
174 PF11288 DUF3089: Protein of u 89.7 0.32 6.8E-06 34.9 2.5 47 21-67 45-117 (207)
175 PRK06765 homoserine O-acetyltr 89.6 0.4 8.7E-06 37.6 3.3 33 44-82 159-192 (389)
176 PF06028 DUF915: Alpha/beta hy 89.5 0.84 1.8E-05 33.8 4.7 45 44-89 102-146 (255)
177 PLN02753 triacylglycerol lipas 89.4 0.57 1.2E-05 38.1 4.0 25 45-69 312-336 (531)
178 PLN02310 triacylglycerol lipas 89.2 0.6 1.3E-05 36.9 3.9 24 45-68 209-232 (405)
179 COG2819 Predicted hydrolase of 88.9 0.47 1E-05 35.2 3.0 23 44-66 136-158 (264)
180 PLN02719 triacylglycerol lipas 88.6 0.66 1.4E-05 37.6 3.9 24 46-69 299-322 (518)
181 PLN02324 triacylglycerol lipas 88.6 0.41 8.9E-06 37.8 2.7 23 46-68 216-238 (415)
182 PLN02162 triacylglycerol lipas 88.5 0.44 9.5E-06 38.2 2.8 24 44-67 277-300 (475)
183 KOG3724 Negative regulator of 88.4 0.51 1.1E-05 40.2 3.2 23 44-66 181-203 (973)
184 PLN02517 phosphatidylcholine-s 88.0 0.27 5.8E-06 40.6 1.3 78 10-88 159-265 (642)
185 PF01674 Lipase_2: Lipase (cla 87.8 1 2.2E-05 32.6 4.1 60 5-66 14-96 (219)
186 PF12146 Hydrolase_4: Putative 87.2 0.79 1.7E-05 27.5 2.8 24 7-31 30-53 (79)
187 PLN02761 lipase class 3 family 87.0 0.9 1.9E-05 37.0 3.8 24 45-68 294-317 (527)
188 PLN02934 triacylglycerol lipas 87.0 0.57 1.2E-05 38.0 2.6 24 44-67 320-343 (515)
189 COG4782 Uncharacterized protei 86.9 2.1 4.5E-05 33.3 5.5 45 44-88 190-236 (377)
190 PF03283 PAE: Pectinacetyleste 84.5 1.2 2.7E-05 34.6 3.4 44 44-88 155-199 (361)
191 KOG2931 Differentiation-relate 83.5 5.1 0.00011 30.4 6.0 59 22-86 79-157 (326)
192 PRK10252 entF enterobactin syn 83.4 4.8 0.0001 36.2 7.0 72 6-83 1081-1168(1296)
193 KOG1553 Predicted alpha/beta h 82.4 2.5 5.4E-05 33.0 4.2 60 19-85 266-344 (517)
194 PF08237 PE-PPE: PE-PPE domain 81.4 8.4 0.00018 27.9 6.5 25 44-68 47-71 (225)
195 COG2936 Predicted acyl esteras 80.7 2.7 6E-05 34.6 4.1 68 15-89 75-162 (563)
196 KOG2369 Lecithin:cholesterol a 80.2 1.5 3.3E-05 35.1 2.5 58 10-68 127-205 (473)
197 PLN03016 sinapoylglucose-malat 80.2 1.9 4.1E-05 34.5 3.0 47 44-90 164-214 (433)
198 PLN02209 serine carboxypeptida 79.1 1.9 4.2E-05 34.4 2.8 47 44-90 166-216 (437)
199 PF11144 DUF2920: Protein of u 78.5 3.2 6.9E-05 32.8 3.7 25 6-30 50-74 (403)
200 PLN02213 sinapoylglucose-malat 77.7 3.3 7.1E-05 31.6 3.6 47 44-90 50-100 (319)
201 KOG2183 Prolylcarboxypeptidase 76.9 6.2 0.00013 31.5 4.8 56 9-64 99-186 (492)
202 cd01826 acyloxyacyl_hydrolase_ 76.7 1.1 2.5E-05 33.9 0.8 15 44-58 11-25 (305)
203 PF05057 DUF676: Putative seri 76.0 2.5 5.4E-05 30.3 2.4 25 45-69 78-102 (217)
204 COG2845 Uncharacterized protei 73.2 34 0.00074 26.4 7.8 99 44-147 116-226 (354)
205 KOG4540 Putative lipase essent 72.5 2.5 5.5E-05 32.1 1.7 23 44-66 275-297 (425)
206 COG5153 CVT17 Putative lipase 72.5 2.5 5.5E-05 32.1 1.7 23 44-66 275-297 (425)
207 KOG3967 Uncharacterized conser 68.6 8.1 0.00018 28.2 3.5 34 44-81 189-222 (297)
208 PRK05282 (alpha)-aspartyl dipe 66.8 10 0.00023 27.7 3.9 20 44-63 111-130 (233)
209 COG2021 MET2 Homoserine acetyl 66.4 5.8 0.00013 31.0 2.6 26 44-69 145-171 (368)
210 PF07519 Tannase: Tannase and 66.1 5.4 0.00012 32.3 2.5 39 44-88 114-152 (474)
211 COG2939 Carboxypeptidase C (ca 65.6 6.3 0.00014 32.0 2.7 44 44-90 197-240 (498)
212 KOG2624 Triglyceride lipase-ch 62.9 9.6 0.00021 30.3 3.3 71 15-88 100-201 (403)
213 COG4814 Uncharacterized protei 62.7 64 0.0014 24.3 10.1 42 44-87 135-177 (288)
214 PLN02679 hydrolase, alpha/beta 61.5 19 0.00042 27.7 4.7 34 108-146 324-357 (360)
215 TIGR02069 cyanophycinase cyano 61.2 19 0.00042 26.5 4.5 17 44-60 114-130 (250)
216 COG1075 LipA Predicted acetylt 60.3 19 0.0004 27.7 4.4 37 44-84 126-162 (336)
217 COG2267 PldB Lysophospholipase 59.2 15 0.00034 27.7 3.8 37 109-147 259-295 (298)
218 cd07207 Pat_ExoU_VipD_like Exo 58.9 8.6 0.00019 26.6 2.2 18 48-65 30-47 (194)
219 KOG1282 Serine carboxypeptidas 57.5 12 0.00026 30.2 3.0 48 44-91 167-218 (454)
220 PF10142 PhoPQ_related: PhoPQ- 54.8 1E+02 0.0022 24.2 10.8 37 99-145 283-319 (367)
221 PF05705 DUF829: Eukaryotic pr 53.2 82 0.0018 22.6 7.5 40 99-142 199-239 (240)
222 PF09994 DUF2235: Uncharacteri 52.5 16 0.00035 27.3 2.9 26 44-69 91-116 (277)
223 PF11144 DUF2920: Protein of u 52.2 18 0.00039 28.7 3.2 23 45-67 184-206 (403)
224 cd07228 Pat_NTE_like_bacteria 51.8 14 0.00031 25.3 2.3 18 48-65 31-48 (175)
225 cd07205 Pat_PNPLA6_PNPLA7_NTE1 50.5 15 0.00033 25.0 2.3 18 48-65 31-48 (175)
226 PF06792 UPF0261: Uncharacteri 49.0 72 0.0016 25.5 6.0 56 12-67 19-117 (403)
227 cd07213 Pat17_PNPLA8_PNPLA9_li 48.7 15 0.00033 27.4 2.3 18 48-65 37-54 (288)
228 PRK00870 haloalkane dehalogena 47.9 33 0.00073 25.3 4.0 32 110-146 270-301 (302)
229 PF05277 DUF726: Protein of un 47.8 58 0.0013 25.4 5.3 45 44-89 219-263 (345)
230 KOG0256 1-aminocyclopropane-1- 47.6 78 0.0017 25.5 5.9 23 44-66 146-168 (471)
231 COG3340 PepE Peptidase E [Amin 47.5 11 0.00024 27.2 1.3 54 9-62 50-134 (224)
232 cd07212 Pat_PNPLA9 Patatin-lik 47.3 16 0.00035 27.8 2.2 17 48-64 35-51 (312)
233 PF12242 Eno-Rase_NADH_b: NAD( 46.7 27 0.00059 20.9 2.6 24 44-67 39-62 (78)
234 PF01734 Patatin: Patatin-like 46.7 17 0.00036 24.4 2.1 18 48-65 30-47 (204)
235 cd07049 BMC_EutL_repeat1 ethan 46.3 38 0.00083 21.5 3.4 36 114-149 59-103 (103)
236 TIGR01607 PST-A Plasmodium sub 46.3 31 0.00067 26.3 3.6 33 109-145 300-332 (332)
237 TIGR03056 bchO_mg_che_rel puta 46.0 30 0.00065 24.7 3.4 31 109-144 248-278 (278)
238 cd07216 Pat17_PNPLA8_PNPLA9_li 45.8 15 0.00032 27.8 1.8 17 48-64 45-61 (309)
239 KOG4840 Predicted hydrolases o 45.6 7.6 0.00016 28.5 0.2 76 10-89 55-147 (299)
240 PRK11126 2-succinyl-6-hydroxy- 45.1 27 0.00058 24.6 3.0 32 109-145 210-241 (242)
241 COG4874 Uncharacterized protei 44.9 64 0.0014 24.0 4.8 43 7-50 57-105 (318)
242 COG3946 VirJ Type IV secretory 44.7 40 0.00086 27.0 4.0 57 2-59 268-340 (456)
243 cd07208 Pat_hypo_Ecoli_yjju_li 44.6 20 0.00044 26.3 2.4 19 48-66 30-48 (266)
244 cd07214 Pat17_isozyme_like Pat 44.6 17 0.00037 28.2 2.0 17 48-64 46-62 (349)
245 cd07211 Pat_PNPLA8 Patatin-lik 44.0 19 0.00042 27.1 2.2 16 49-64 45-60 (308)
246 PF10081 Abhydrolase_9: Alpha/ 43.9 1.4E+02 0.0031 22.7 7.4 64 20-86 60-147 (289)
247 cd07199 Pat17_PNPLA8_PNPLA9_li 43.7 19 0.00042 26.3 2.1 17 49-65 38-54 (258)
248 PF03575 Peptidase_S51: Peptid 42.1 11 0.00024 25.4 0.5 15 44-58 67-81 (154)
249 cd07198 Patatin Patatin-like p 41.6 24 0.00052 24.1 2.2 18 48-65 29-46 (172)
250 COG3673 Uncharacterized conser 41.3 26 0.00056 27.3 2.4 25 44-68 121-145 (423)
251 TIGR03343 biphenyl_bphD 2-hydr 40.7 55 0.0012 23.6 4.2 32 108-144 250-281 (282)
252 cd07046 BMC_PduU-EutS 1,2-prop 40.6 99 0.0021 19.9 4.9 41 108-149 62-102 (110)
253 cd07232 Pat_PLPL Patain-like p 38.9 27 0.00058 27.8 2.3 18 48-65 98-115 (407)
254 TIGR03100 hydr1_PEP hydrolase, 38.9 50 0.0011 24.3 3.7 34 108-145 241-274 (274)
255 cd07210 Pat_hypo_W_succinogene 38.6 29 0.00063 25.0 2.3 17 48-64 31-47 (221)
256 TIGR01836 PHA_synth_III_C poly 38.6 1E+02 0.0022 23.6 5.4 44 99-146 307-350 (350)
257 cd07230 Pat_TGL4-5_like Triacy 38.1 28 0.0006 27.8 2.3 18 48-65 104-121 (421)
258 cd07217 Pat17_PNPLA8_PNPLA9_li 37.9 28 0.0006 27.0 2.3 17 48-64 44-60 (344)
259 PLN02965 Probable pheophorbida 37.9 46 0.001 23.9 3.4 42 99-145 210-252 (255)
260 cd07215 Pat17_PNPLA8_PNPLA9_li 36.7 27 0.00059 26.7 2.0 16 48-63 43-58 (329)
261 cd01819 Patatin_and_cPLA2 Pata 36.5 33 0.00073 23.0 2.3 16 48-63 31-46 (155)
262 TIGR01162 purE phosphoribosyla 36.3 52 0.0011 22.6 3.1 63 1-66 5-75 (156)
263 cd07209 Pat_hypo_Ecoli_Z1214_l 36.1 32 0.0007 24.5 2.2 19 48-66 29-47 (215)
264 cd07204 Pat_PNPLA_like Patatin 34.4 37 0.00079 24.8 2.3 18 48-65 34-51 (243)
265 PF14359 DUF4406: Domain of un 34.3 1.1E+02 0.0025 18.7 4.8 58 8-66 17-85 (92)
266 PF00731 AIRC: AIR carboxylase 34.3 77 0.0017 21.6 3.7 63 1-66 7-77 (150)
267 cd07206 Pat_TGL3-4-5_SDP1 Tria 34.2 36 0.00077 26.0 2.3 18 48-65 100-117 (298)
268 cd03365 TOPRIM_TopoIIA TOPRIM_ 33.4 27 0.00058 22.8 1.3 12 47-58 4-15 (120)
269 cd01030 TOPRIM_TopoIIA_like TO 33.3 24 0.00053 22.8 1.1 11 47-57 4-14 (115)
270 cd07231 Pat_SDP1-like Sugar-De 33.3 39 0.00084 26.1 2.3 18 48-65 99-116 (323)
271 KOG2214 Predicted esterase of 33.0 18 0.00039 29.6 0.5 21 48-68 205-225 (543)
272 COG1073 Hydrolases of the alph 33.0 1.1E+02 0.0023 21.9 4.6 37 109-147 262-298 (299)
273 cd07225 Pat_PNPLA6_PNPLA7 Pata 33.0 37 0.0008 25.8 2.2 18 48-65 46-63 (306)
274 cd07224 Pat_like Patatin-like 32.7 40 0.00086 24.5 2.3 18 48-65 32-49 (233)
275 cd03366 TOPRIM_TopoIIA_GyrB TO 32.2 22 0.00048 23.0 0.8 11 47-57 4-14 (114)
276 COG1623 Predicted nucleic-acid 31.4 56 0.0012 25.0 2.8 26 6-31 104-129 (349)
277 KOG2541 Palmitoyl protein thio 31.2 2.4E+02 0.0051 21.5 7.0 62 7-68 39-115 (296)
278 cd07218 Pat_iPLA2 Calcium-inde 31.1 41 0.00089 24.7 2.1 17 49-65 34-50 (245)
279 cd03146 GAT1_Peptidase_E Type 31.1 1.3E+02 0.0028 21.3 4.7 18 44-61 112-129 (212)
280 PF05822 UMPH-1: Pyrimidine 5' 30.0 31 0.00068 25.5 1.3 13 44-56 179-191 (246)
281 PF02089 Palm_thioest: Palmito 29.8 1.1E+02 0.0025 23.1 4.3 36 44-84 79-114 (279)
282 PF07519 Tannase: Tannase and 29.6 2.3E+02 0.0049 23.1 6.2 35 109-146 393-427 (474)
283 PF06658 DUF1168: Protein of u 29.4 17 0.00036 24.5 -0.1 10 48-57 25-34 (142)
284 PLN02606 palmitoyl-protein thi 29.4 1.2E+02 0.0025 23.3 4.3 25 44-68 94-118 (306)
285 PLN02633 palmitoyl protein thi 29.2 1.1E+02 0.0025 23.5 4.2 61 8-68 42-117 (314)
286 cd07222 Pat_PNPLA4 Patatin-lik 29.0 50 0.0011 24.2 2.3 16 48-63 34-49 (246)
287 cd07229 Pat_TGL3_like Triacylg 28.2 50 0.0011 26.2 2.2 18 48-65 114-131 (391)
288 COG5425 Usg protein, probable 27.9 24 0.00051 21.3 0.3 9 28-36 39-47 (90)
289 TIGR03712 acc_sec_asp2 accesso 27.9 1.5E+02 0.0034 24.4 4.9 37 44-88 356-392 (511)
290 TIGR01544 HAD-SF-IE haloacid d 27.8 35 0.00075 25.7 1.3 13 44-56 211-223 (277)
291 PRK15405 ethanolamine utilizat 27.6 83 0.0018 22.8 3.1 35 115-149 69-112 (217)
292 PF11339 DUF3141: Protein of u 27.3 2.6E+02 0.0057 23.4 6.1 62 5-68 86-163 (581)
293 cd07220 Pat_PNPLA2 Patatin-lik 27.1 54 0.0012 24.2 2.2 17 49-65 40-56 (249)
294 cd07227 Pat_Fungal_NTE1 Fungal 27.0 57 0.0012 24.4 2.3 18 48-65 41-58 (269)
295 PLN03084 alpha/beta hydrolase 26.8 1.3E+02 0.0028 23.6 4.4 32 109-145 352-383 (383)
296 cd03145 GAT1_cyanophycinase Ty 26.5 40 0.00087 24.1 1.4 19 44-62 115-133 (217)
297 PRK10279 hypothetical protein; 26.3 59 0.0013 24.7 2.3 17 48-64 36-52 (300)
298 cd03129 GAT1_Peptidase_E_like 26.0 44 0.00096 23.6 1.5 19 44-62 112-130 (210)
299 PF06259 Abhydrolase_8: Alpha/ 25.9 66 0.0014 22.5 2.3 22 44-65 108-129 (177)
300 cd07221 Pat_PNPLA3 Patatin-lik 25.4 65 0.0014 23.8 2.3 18 48-65 35-52 (252)
301 PF08874 DUF1835: Domain of un 24.8 55 0.0012 20.9 1.7 17 48-64 3-19 (124)
302 PF10905 DUF2695: Protein of u 24.7 11 0.00023 20.9 -1.4 33 117-149 13-45 (53)
303 cd01983 Fer4_NifH The Fer4_Nif 24.1 1.1E+02 0.0023 17.6 2.9 26 2-28 9-34 (99)
304 COG2342 Predicted extracellula 23.7 1.1E+02 0.0023 23.3 3.1 30 7-37 230-259 (300)
305 COG0859 RfaF ADP-heptose:LPS h 23.6 1.2E+02 0.0027 23.1 3.7 33 31-63 236-270 (334)
306 COG1752 RssA Predicted esteras 23.3 73 0.0016 24.0 2.3 19 48-66 42-60 (306)
307 KOG2029 Uncharacterized conser 23.1 76 0.0016 26.8 2.4 24 44-67 525-548 (697)
308 TIGR03607 patatin-related prot 22.3 71 0.0015 27.7 2.2 17 48-64 69-85 (739)
309 TIGR02195 heptsyl_trn_II lipop 22.2 1.6E+02 0.0035 22.1 4.1 20 44-63 251-270 (334)
310 PRK02399 hypothetical protein; 22.2 4.2E+02 0.0091 21.3 6.3 24 44-67 96-119 (406)
311 TIGR02964 xanthine_xdhC xanthi 21.8 1.2E+02 0.0027 22.2 3.2 28 12-39 114-143 (246)
312 PF08438 MMR_HSR1_C: GTPase of 21.5 50 0.0011 21.2 1.0 45 103-147 36-83 (109)
313 TIGR02193 heptsyl_trn_I lipopo 21.4 1.8E+02 0.0039 21.7 4.1 20 44-63 254-273 (319)
314 TIGR03018 pepcterm_TyrKin exop 21.3 1.3E+02 0.0027 21.2 3.1 31 2-32 46-76 (207)
315 PF08373 RAP: RAP domain; Int 21.2 99 0.0021 16.7 2.1 21 10-30 20-40 (58)
316 KOG2182 Hydrolytic enzymes of 21.2 2.9E+02 0.0063 22.9 5.3 55 12-66 109-193 (514)
317 PF13207 AAA_17: AAA domain; P 21.0 90 0.002 19.3 2.1 19 11-29 14-32 (121)
318 PF01118 Semialdhyde_dh: Semia 20.8 1.4E+02 0.003 18.9 3.0 30 7-37 77-108 (121)
319 PRK06765 homoserine O-acetyltr 20.6 2.2E+02 0.0048 22.4 4.6 42 99-145 344-387 (389)
320 KOG1532 GTPase XAB1, interacts 20.6 1.2E+02 0.0026 23.3 2.8 37 2-39 29-66 (366)
321 PF05576 Peptidase_S37: PS-10 20.5 2E+02 0.0042 23.3 4.1 35 109-143 377-411 (448)
322 TIGR02578 cas_TM1811_Csm1 CRIS 20.2 1.8E+02 0.0039 24.8 4.1 43 103-146 289-334 (648)
323 PF05167 DUF711: Uncharacteris 20.1 1.1E+02 0.0023 24.5 2.6 24 11-34 232-255 (399)
No 1
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=100.00 E-value=3.6e-32 Score=204.65 Aligned_cols=146 Identities=34% Similarity=0.530 Sum_probs=127.1
Q ss_pred CCCCCchhhHHHHHHHHhhCCCEEEEEccCCCCCCCccc---------c------chh----cccEEEeecChhhHHHHH
Q 037206 1 MGSPFCSTYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK---------T------LVL----ILLVFLRGNSAGGNIVHS 61 (149)
Q Consensus 1 ~~s~~~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~---------~------~~~----~~~i~l~G~SAGg~La~~ 61 (149)
+||+.+..|+.+|.++|++++++|++||||||||++||+ . |+. ++||+|+|||||||||..
T Consensus 103 ~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~ 182 (336)
T KOG1515|consen 103 LGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHV 182 (336)
T ss_pred eCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHH
Confidence 588999999999999999999999999999999999999 2 444 999999999999999999
Q ss_pred HHHHhccCCCCCCccceEEEeccccCCCCCCc------------------hHHHH-------------------------
Q 037206 62 MAFQASFDDLNGIKLSGIYLVQPYFGRNYGVV------------------DNCWV------------------------- 98 (149)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~l~~P~~~~~~~~~------------------~~~~~------------------------- 98 (149)
+++++.+..+..++++|+++++|++....... +..|+
T Consensus 183 va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d 262 (336)
T KOG1515|consen 183 VAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKD 262 (336)
T ss_pred HHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccC
Confidence 99998875434578999999999988765432 22333
Q ss_pred ------------------------HHHHHhcC-CCceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhcc
Q 037206 99 ------------------------IYFENCGW-AGETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNRD 146 (149)
Q Consensus 99 ------------------------~~~~~l~~-~~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~~ 146 (149)
.|+++|++ |+++++.+++++.|+|..+.+..+.+.+.++++.+|+++.
T Consensus 263 ~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 263 LSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred ccccCCCceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 89999986 5599999999999999999888889999999999999864
No 2
>PRK10162 acetyl esterase; Provisional
Probab=99.95 E-value=1e-26 Score=175.51 Aligned_cols=144 Identities=17% Similarity=0.182 Sum_probs=118.3
Q ss_pred CchhhHHHHHHHHhhCCCEEEEEccCCCCCCCccc---------cchh---------cccEEEeecChhhHHHHHHHHHh
Q 037206 5 FCSTYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK---------TLVL---------ILLVFLRGNSAGGNIVHSMAFQA 66 (149)
Q Consensus 5 ~~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~---------~~~~---------~~~i~l~G~SAGg~La~~~~~~~ 66 (149)
....++.+|+.|+++.|+.|++||||++||++||+ +|+. ++||+|+|+||||+||+.++..+
T Consensus 96 ~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~ 175 (318)
T PRK10162 96 NLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWL 175 (318)
T ss_pred CchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHH
Confidence 44568889999999889999999999999999998 6664 67999999999999999999888
Q ss_pred ccCCCCCCccceEEEeccccCCCCCCc----------------hHHH-----------------------H---------
Q 037206 67 SFDDLNGIKLSGIYLVQPYFGRNYGVV----------------DNCW-----------------------V--------- 98 (149)
Q Consensus 67 ~~~~~~~~~~~~~~l~~P~~~~~~~~~----------------~~~~-----------------------~--------- 98 (149)
++.+.....+++++++||+++...... ..+| .
T Consensus 176 ~~~~~~~~~~~~~vl~~p~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~ 255 (318)
T PRK10162 176 RDKQIDCGKVAGVLLWYGLYGLRDSVSRRLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAG 255 (318)
T ss_pred HhcCCCccChhheEEECCccCCCCChhHHHhCCCccccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEe
Confidence 765433357899999999887532100 0001 0
Q ss_pred -----------HHHHHhcC-CCceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhcccC
Q 037206 99 -----------IYFENCGW-AGETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNRDNV 148 (149)
Q Consensus 99 -----------~~~~~l~~-~~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~~~~ 148 (149)
.|+++|++ ++++++++|+|+.|+|..+.+..++++++++++.+||+++++
T Consensus 256 g~~D~L~de~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 256 AEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred cCCCcCcChHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 88888875 459999999999999998877789999999999999998764
No 3
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.94 E-value=3.1e-26 Score=172.30 Aligned_cols=139 Identities=27% Similarity=0.258 Sum_probs=117.1
Q ss_pred CCchhhHHHHHHHHhhCCCEEEEEccCCCCCCCccc---------cchh---------cccEEEeecChhhHHHHHHHHH
Q 037206 4 PFCSTYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK---------TLVL---------ILLVFLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 4 ~~~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~---------~~~~---------~~~i~l~G~SAGg~La~~~~~~ 65 (149)
+...+++.+++.++...|+.|++|||||+||++||+ +|+. +++|+|+||||||||++.+++.
T Consensus 93 g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~ 172 (312)
T COG0657 93 GSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALA 172 (312)
T ss_pred cChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHH
Confidence 456777899999999999999999999999999999 6666 8999999999999999999999
Q ss_pred hccCCCCCCccceEEEeccccCCCCCCc--------------h---HHHH------------------------------
Q 037206 66 ASFDDLNGIKLSGIYLVQPYFGRNYGVV--------------D---NCWV------------------------------ 98 (149)
Q Consensus 66 ~~~~~~~~~~~~~~~l~~P~~~~~~~~~--------------~---~~~~------------------------------ 98 (149)
.++++ .+.+.+++++||++|.....+ + .++.
T Consensus 173 ~~~~~--~~~p~~~~li~P~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~lPP~~i 250 (312)
T COG0657 173 ARDRG--LPLPAAQVLISPLLDLTSSAASLPGYGEADLLDAAAILAWFADLYLGAAPDREDPEASPLASDDLSGLPPTLI 250 (312)
T ss_pred HHhcC--CCCceEEEEEecccCCcccccchhhcCCccccCHHHHHHHHHHHhCcCccccCCCccCccccccccCCCCEEE
Confidence 88863 467899999999999875111 0 0000
Q ss_pred -------------HHHHHhcC-CCceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhcc
Q 037206 99 -------------IYFENCGW-AGETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNRD 146 (149)
Q Consensus 99 -------------~~~~~l~~-~~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~~ 146 (149)
.|+++|++ ++++++++++|+.|+|..... +++++.+.++.+|+++.
T Consensus 251 ~~a~~D~l~~~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~~--~~a~~~~~~~~~~l~~~ 310 (312)
T COG0657 251 QTAEFDPLRDEGEAYAERLRAAGVPVELRVYPGMIHGFDLLTG--PEARSALRQIAAFLRAA 310 (312)
T ss_pred EecCCCcchhHHHHHHHHHHHcCCeEEEEEeCCcceeccccCc--HHHHHHHHHHHHHHHHh
Confidence 88888876 559999999999999987654 88899999999999854
No 4
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.91 E-value=2.8e-24 Score=152.99 Aligned_cols=83 Identities=31% Similarity=0.417 Sum_probs=71.3
Q ss_pred CCchhhHHHHHHHHhhCCCEEEEEccCCCCCCCccc---------cchh---------cccEEEeecChhhHHHHHHHHH
Q 037206 4 PFCSTYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK---------TLVL---------ILLVFLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 4 ~~~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~---------~~~~---------~~~i~l~G~SAGg~La~~~~~~ 65 (149)
+..+.++.+++.++++.|++|+++||||+||++||+ +|+. ++||+++|+||||+||+.++..
T Consensus 12 g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~ 91 (211)
T PF07859_consen 12 GSKESHWPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALR 91 (211)
T ss_dssp CGTTTHHHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhhccEEEEEeeccccccccccccccccccceeeeccccccccccccceEEeecccccchhhhhhhh
Confidence 456777999999999789999999999999999999 6665 8899999999999999999998
Q ss_pred hccCCCCCCccceEEEeccccCC
Q 037206 66 ASFDDLNGIKLSGIYLVQPYFGR 88 (149)
Q Consensus 66 ~~~~~~~~~~~~~~~l~~P~~~~ 88 (149)
..+.+ .+.|++++++||++|.
T Consensus 92 ~~~~~--~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 92 ARDRG--LPKPKGIILISPWTDL 112 (211)
T ss_dssp HHHTT--TCHESEEEEESCHSST
T ss_pred hhhhc--ccchhhhhcccccccc
Confidence 88763 3569999999999887
No 5
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=99.79 E-value=2.2e-19 Score=140.78 Aligned_cols=82 Identities=27% Similarity=0.346 Sum_probs=72.8
Q ss_pred CchhhHHHHHHHHhhCCCEEEEEccCCCCCCCccc---------cchh---------cccEEEeecChhhHHHHHHHHHh
Q 037206 5 FCSTYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK---------TLVL---------ILLVFLRGNSAGGNIVHSMAFQA 66 (149)
Q Consensus 5 ~~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~---------~~~~---------~~~i~l~G~SAGg~La~~~~~~~ 66 (149)
+++.|..+.+.+|+.+||.|++|||.||||+|||. .|+. .+||++.||||||||+..+++++
T Consensus 411 sSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaPFPRaleEv~fAYcW~inn~allG~TgEriv~aGDSAGgNL~~~VaLr~ 490 (880)
T KOG4388|consen 411 SSKSHEPYLRSWAQALGCPIISVDYSLAPEAPFPRALEEVFFAYCWAINNCALLGSTGERIVLAGDSAGGNLCFTVALRA 490 (880)
T ss_pred ccccccHHHHHHHHHhCCCeEEeeeccCCCCCCCcHHHHHHHHHHHHhcCHHHhCcccceEEEeccCCCcceeehhHHHH
Confidence 46889999999999999999999999999999999 7776 89999999999999999999998
Q ss_pred ccCCCCCCccceEEEeccccCC
Q 037206 67 SFDDLNGIKLSGIYLVQPYFGR 88 (149)
Q Consensus 67 ~~~~~~~~~~~~~~l~~P~~~~ 88 (149)
...+. ..|.|+++.||.+-.
T Consensus 491 i~~gv--RvPDGl~laY~ptl~ 510 (880)
T KOG4388|consen 491 IAYGV--RVPDGLMLAYPPTLL 510 (880)
T ss_pred HHhCC--CCCCceEEecChhhc
Confidence 88754 357899988875443
No 6
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.61 E-value=7.8e-15 Score=104.68 Aligned_cols=129 Identities=13% Similarity=0.073 Sum_probs=89.5
Q ss_pred hHHHHHHHHhhCCCEEEEEccCCCCCCCc----------cc----------cchh------cccEEEeecChhhHHHHHH
Q 037206 9 YHNYVGSHSAKANVIVVSVDYRLAPEHLL----------GK----------TLVL------ILLVFLRGNSAGGNIVHSM 62 (149)
Q Consensus 9 ~~~~~~~la~~~g~~v~~vdYrlaPe~~~----------p~----------~~~~------~~~i~l~G~SAGg~La~~~ 62 (149)
+....+.||++ |++|+.+|||-.++..- .. +|+. ++||+++|+|+||++++.+
T Consensus 3 f~~~~~~la~~-Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~ 81 (213)
T PF00326_consen 3 FNWNAQLLASQ-GYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLA 81 (213)
T ss_dssp -SHHHHHHHTT-T-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHH
T ss_pred eeHHHHHHHhC-CEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchh
Confidence 34456667776 99999999998874211 11 4443 9999999999999999999
Q ss_pred HHHhccCCCCCCccceEEEeccccCCCCCCch-------------------HHH-H------------------------
Q 037206 63 AFQASFDDLNGIKLSGIYLVQPYFGRNYGVVD-------------------NCW-V------------------------ 98 (149)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~l~~P~~~~~~~~~~-------------------~~~-~------------------------ 98 (149)
+.... ..+++.+..+|++|....... ..+ .
T Consensus 82 ~~~~~------~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D 155 (213)
T PF00326_consen 82 ATQHP------DRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQIKPPVLIIHGEND 155 (213)
T ss_dssp HHHTC------CGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTB
T ss_pred hcccc------eeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccccCCCCEEEEccCCC
Confidence 87432 247889999998876533210 000 0
Q ss_pred ---------HHHHHhcC-CCceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhcccC
Q 037206 99 ---------IYFENCGW-AGETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNRDNV 148 (149)
Q Consensus 99 ---------~~~~~l~~-~~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~~~~ 148 (149)
.++++|++ +.++++++||+++|+|.. .....+..+++.+|++++++
T Consensus 156 ~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~----~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 156 PRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGN----PENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp SSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTS----HHHHHHHHHHHHHHHHHHTT
T ss_pred CccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCC----chhHHHHHHHHHHHHHHHcC
Confidence 67777764 559999999999997743 24455899999999999875
No 7
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.47 E-value=4.4e-13 Score=96.06 Aligned_cols=135 Identities=12% Similarity=-0.002 Sum_probs=86.1
Q ss_pred CchhhHHHHHHHHhhCCCEEEEEccCCCCC--CCccc-------------------------cchh------cccEEEee
Q 037206 5 FCSTYHNYVGSHSAKANVIVVSVDYRLAPE--HLLGK-------------------------TLVL------ILLVFLRG 51 (149)
Q Consensus 5 ~~~~~~~~~~~la~~~g~~v~~vdYrlaPe--~~~p~-------------------------~~~~------~~~i~l~G 51 (149)
.....+.++.+||++ |+.|+.+|+---.. ...+. .|+. .+||+++|
T Consensus 26 ~~~~~~~~ad~lA~~-Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vG 104 (218)
T PF01738_consen 26 LNPNIRDLADRLAEE-GYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQPEVDPGKIGVVG 104 (218)
T ss_dssp S-HHHHHHHHHHHHT-T-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEE
T ss_pred CchHHHHHHHHHHhc-CCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccccCCCcEEEEE
Confidence 346677899999987 99999999743222 11111 1222 58999999
Q ss_pred cChhhHHHHHHHHHhccCCCCCCccceEEEeccccCCCC--------CCc--------hHH-----HHHHHHHhcC-CCc
Q 037206 52 NSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGRNY--------GVV--------DNC-----WVIYFENCGW-AGE 109 (149)
Q Consensus 52 ~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~--------~~~--------~~~-----~~~~~~~l~~-~~~ 109 (149)
.|.||.+++.++... +.+++.+.+||...... ..| |+. ...+.+.+++ +.+
T Consensus 105 fc~GG~~a~~~a~~~-------~~~~a~v~~yg~~~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~ 177 (218)
T PF01738_consen 105 FCWGGKLALLLAARD-------PRVDAAVSFYGGSPPPPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVD 177 (218)
T ss_dssp ETHHHHHHHHHHCCT-------TTSSEEEEES-SSSGGGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTT
T ss_pred EecchHHhhhhhhhc-------cccceEEEEcCCCCCCcchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCc
Confidence 999999999887432 35899999999111100 001 111 1266667754 559
Q ss_pred eEEEEeCCCCeeeeeecC---CchhHHHHHHHHHHHHhccc
Q 037206 110 TEIVETQGEDHVFYLFNL---DSEEAVPLMDKLASFLNRDN 147 (149)
Q Consensus 110 v~~~~~~g~~H~f~~~~~---~~~~~~~~~~~i~~fl~~~~ 147 (149)
+++++|+|+.|||..-.. ....++++++++.+||++++
T Consensus 178 ~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 178 VEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp EEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred EEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 999999999999987543 23467889999999999985
No 8
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=99.45 E-value=5.9e-13 Score=101.54 Aligned_cols=68 Identities=22% Similarity=0.293 Sum_probs=58.2
Q ss_pred CCEEEEEccCCCC----CCCccc---------cchh----cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEec
Q 037206 21 NVIVVSVDYRLAP----EHLLGK---------TLVL----ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQ 83 (149)
Q Consensus 21 g~~v~~vdYrlaP----e~~~p~---------~~~~----~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~ 83 (149)
...++.+||.|++ +++||. +++. .++|.+|||||||||++.+++.+...+ ..+.|+.++|+|
T Consensus 154 ~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~-~~~~Pk~~iLIS 232 (374)
T PF10340_consen 154 EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPN-KLPYPKSAILIS 232 (374)
T ss_pred CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcC-CCCCCceeEEEC
Confidence 4589999999999 899999 3333 899999999999999999999887643 235789999999
Q ss_pred cccCCC
Q 037206 84 PYFGRN 89 (149)
Q Consensus 84 P~~~~~ 89 (149)
||+.+.
T Consensus 233 PWv~l~ 238 (374)
T PF10340_consen 233 PWVNLV 238 (374)
T ss_pred CCcCCc
Confidence 999876
No 9
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.37 E-value=1.1e-11 Score=90.13 Aligned_cols=136 Identities=13% Similarity=0.045 Sum_probs=99.2
Q ss_pred CchhhHHHHHHHHhhCCCEEEEEccC--CCCCCCccc--------------------------cchh------cccEEEe
Q 037206 5 FCSTYHNYVGSHSAKANVIVVSVDYR--LAPEHLLGK--------------------------TLVL------ILLVFLR 50 (149)
Q Consensus 5 ~~~~~~~~~~~la~~~g~~v~~vdYr--laPe~~~p~--------------------------~~~~------~~~i~l~ 50 (149)
-.+..+.+|++||++ |++|+.+|.= ..+...+.. .|+. +++|+++
T Consensus 39 l~~~i~~~a~rlA~~-Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~ 117 (236)
T COG0412 39 LNPHIRDVARRLAKA-GYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVV 117 (236)
T ss_pred CchHHHHHHHHHHhC-CcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEE
Confidence 345778899999998 9999999973 333333331 3333 5889999
Q ss_pred ecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCCCCCCc---------------hHHH-----HHHHHHhcCCC-c
Q 037206 51 GNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGRNYGVV---------------DNCW-----VIYFENCGWAG-E 109 (149)
Q Consensus 51 G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~~~~---------------~~~~-----~~~~~~l~~~~-~ 109 (149)
|+|.||.+++.++.... .+++.+.+||......... |..+ .++.+.+.+.+ +
T Consensus 118 GfC~GG~~a~~~a~~~~-------~v~a~v~fyg~~~~~~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~ 190 (236)
T COG0412 118 GFCMGGGLALLAATRAP-------EVKAAVAFYGGLIADDTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVK 190 (236)
T ss_pred EEcccHHHHHHhhcccC-------CccEEEEecCCCCCCcccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCC
Confidence 99999999999885322 4899999998765322211 1111 16777777654 8
Q ss_pred eEEEEeCCCCeeeeee------cCCchhHHHHHHHHHHHHhcccC
Q 037206 110 TEIVETQGEDHVFYLF------NLDSEEAVPLMDKLASFLNRDNV 148 (149)
Q Consensus 110 v~~~~~~g~~H~f~~~------~~~~~~~~~~~~~i~~fl~~~~~ 148 (149)
+++.+|+++.|+|..- ......++++++++.+|++++++
T Consensus 191 ~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 191 VDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred eeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999853 23556788999999999998764
No 10
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.28 E-value=2.1e-12 Score=90.57 Aligned_cols=69 Identities=19% Similarity=0.311 Sum_probs=57.2
Q ss_pred HhhCCCEEEEEccCCCCCCCccc----------cchh-----cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEE
Q 037206 17 SAKANVIVVSVDYRLAPEHLLGK----------TLVL-----ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYL 81 (149)
Q Consensus 17 a~~~g~~v~~vdYrlaPe~~~p~----------~~~~-----~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l 81 (149)
|.+.|++|++++|.|+|+..--. +|+. .++|.+.|||||+||++.+..+.++ ++|.|+++
T Consensus 93 a~~~gY~vasvgY~l~~q~htL~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~-----prI~gl~l 167 (270)
T KOG4627|consen 93 AVRRGYRVASVGYNLCPQVHTLEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRS-----PRIWGLIL 167 (270)
T ss_pred hhhcCeEEEEeccCcCcccccHHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcC-----chHHHHHH
Confidence 34569999999999999984433 5655 7789999999999999999988654 57999999
Q ss_pred eccccCCCC
Q 037206 82 VQPYFGRNY 90 (149)
Q Consensus 82 ~~P~~~~~~ 90 (149)
+++.+++.+
T Consensus 168 ~~GvY~l~E 176 (270)
T KOG4627|consen 168 LCGVYDLRE 176 (270)
T ss_pred HhhHhhHHH
Confidence 999988654
No 11
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.11 E-value=2.4e-09 Score=79.47 Aligned_cols=90 Identities=13% Similarity=0.171 Sum_probs=63.1
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCCCCCCc------------------------------
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGRNYGVV------------------------------ 93 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~~~~------------------------------ 93 (149)
.++++++|+|+||++|+.++....+ .++++++++|+++......
T Consensus 137 ~~~~~~~G~S~GG~~a~~~a~~~p~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 210 (275)
T TIGR02821 137 GERQGITGHSMGGHGALVIALKNPD------RFKSVSAFAPIVAPSRCPWGQKAFSAYLGADEAAWRSYDASLLVADGGR 210 (275)
T ss_pred CCceEEEEEChhHHHHHHHHHhCcc------cceEEEEECCccCcccCcchHHHHHHHhcccccchhhcchHHHHhhccc
Confidence 6789999999999999999876443 3678888888765431100
Q ss_pred -----------hH---H--H-HHHHHHhcC-CCceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhcc
Q 037206 94 -----------DN---C--W-VIYFENCGW-AGETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNRD 146 (149)
Q Consensus 94 -----------~~---~--~-~~~~~~l~~-~~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~~ 146 (149)
|. . . ..+.+.+++ +.++++.+++|+.|+|..+. ..+.+.++|..++
T Consensus 211 ~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~~~-------~~~~~~~~~~~~~ 274 (275)
T TIGR02821 211 HSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYFIA-------SFIADHLRHHAER 274 (275)
T ss_pred CCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchhHH-------HhHHHHHHHHHhh
Confidence 00 0 0 046667765 45999999999999997763 4666666666554
No 12
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.10 E-value=1.3e-09 Score=72.52 Aligned_cols=107 Identities=20% Similarity=0.229 Sum_probs=76.0
Q ss_pred CchhhHHHHHHHHhhCCCEEEEEccCCCCCCCccc------cch-----hcccEEEeecChhhHHHHHHHHHhccCCCCC
Q 037206 5 FCSTYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK------TLV-----LILLVFLRGNSAGGNIVHSMAFQASFDDLNG 73 (149)
Q Consensus 5 ~~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~------~~~-----~~~~i~l~G~SAGg~La~~~~~~~~~~~~~~ 73 (149)
....+..+++.++++ |+.|+.+|||......-.. +++ .+++|+++|+|+||.+++.++...
T Consensus 11 ~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~------- 82 (145)
T PF12695_consen 11 SRRDYQPLAEALAEQ-GYAVVAFDYPGHGDSDGADAVERVLADIRAGYPDPDRIILIGHSMGGAIAANLAARN------- 82 (145)
T ss_dssp TTHHHHHHHHHHHHT-TEEEEEESCTTSTTSHHSHHHHHHHHHHHHHHCTCCEEEEEEETHHHHHHHHHHHHS-------
T ss_pred CHHHHHHHHHHHHHC-CCEEEEEecCCCCccchhHHHHHHHHHHHhhcCCCCcEEEEEEccCcHHHHHHhhhc-------
Confidence 356688899999998 9999999999875542222 332 189999999999999999988743
Q ss_pred CccceEEEeccccCCCCC----Cc--------h-----HHHHHHHHHhcCCCceEEEEeCCCCee
Q 037206 74 IKLSGIYLVQPYFGRNYG----VV--------D-----NCWVIYFENCGWAGETEIVETQGEDHV 121 (149)
Q Consensus 74 ~~~~~~~l~~P~~~~~~~----~~--------~-----~~~~~~~~~l~~~~~v~~~~~~g~~H~ 121 (149)
+++++++++.|+.+.... .+ | ..++.+.++++ .+.++++++|+.|+
T Consensus 83 ~~v~~~v~~~~~~~~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 83 PRVKAVVLLSPYPDSEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP--GPKELYIIPGAGHF 145 (145)
T ss_dssp TTESEEEEESESSGCHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC--SSEEEEEETTS-TT
T ss_pred cceeEEEEecCccchhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC--CCcEEEEeCCCcCc
Confidence 358999999996432110 01 1 12225555555 67899999999994
No 13
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.06 E-value=9.2e-10 Score=90.15 Aligned_cols=129 Identities=13% Similarity=0.107 Sum_probs=88.7
Q ss_pred hhHHHHHHHHhhCCCEEEEEccCCCCCC----------Cc-----cc-----cchh------cccEEEeecChhhHHHHH
Q 037206 8 TYHNYVGSHSAKANVIVVSVDYRLAPEH----------LL-----GK-----TLVL------ILLVFLRGNSAGGNIVHS 61 (149)
Q Consensus 8 ~~~~~~~~la~~~g~~v~~vdYrlaPe~----------~~-----p~-----~~~~------~~~i~l~G~SAGg~La~~ 61 (149)
.+....+.++.+ |++|+.++||=.-.. .+ .+ +|+. ++||+++|+|-||.++++
T Consensus 411 ~~~~~~q~~~~~-G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~ 489 (620)
T COG1506 411 SFNPEIQVLASA-GYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLL 489 (620)
T ss_pred ccchhhHHHhcC-CeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHH
Confidence 466677888876 999999999954221 11 11 4443 889999999999999999
Q ss_pred HHHHhccCCCCCCccceEEEeccccCCCCC-C--------------------chHHHH----------------------
Q 037206 62 MAFQASFDDLNGIKLSGIYLVQPYFGRNYG-V--------------------VDNCWV---------------------- 98 (149)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~l~~P~~~~~~~-~--------------------~~~~~~---------------------- 98 (149)
++.... .+++.+...+.++.... . .+.++.
T Consensus 490 ~~~~~~-------~f~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D 562 (620)
T COG1506 490 AATKTP-------RFKAAVAVAGGVDWLLYFGESTEGLRFDPEENGGGPPEDREKYEDRSPIFYADNIKTPLLLIHGEED 562 (620)
T ss_pred HHhcCc-------hhheEEeccCcchhhhhccccchhhcCCHHHhCCCcccChHHHHhcChhhhhcccCCCEEEEeecCC
Confidence 986543 24555555543221100 0 001221
Q ss_pred ---------HHHHHhcC-CCceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhcccC
Q 037206 99 ---------IYFENCGW-AGETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNRDNV 148 (149)
Q Consensus 99 ---------~~~~~l~~-~~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~~~~ 148 (149)
+|.++|+. +.++++++||++.|+|.. .....+.++++.+|++++++
T Consensus 563 ~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~----~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 563 DRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR----PENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred ccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC----chhHHHHHHHHHHHHHHHhc
Confidence 77777775 559999999999999844 34567899999999999875
No 14
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.93 E-value=1.1e-08 Score=75.82 Aligned_cols=81 Identities=21% Similarity=0.224 Sum_probs=57.1
Q ss_pred CCchhhHHHHHHHHhhCCCEEEEEccCCCCC----CCc-cc---------cchh---------cccEEEeecChhhHHHH
Q 037206 4 PFCSTYHNYVGSHSAKANVIVVSVDYRLAPE----HLL-GK---------TLVL---------ILLVFLRGNSAGGNIVH 60 (149)
Q Consensus 4 ~~~~~~~~~~~~la~~~g~~v~~vdYrlaPe----~~~-p~---------~~~~---------~~~i~l~G~SAGg~La~ 60 (149)
-.+-+|..+|.+|++. |+.|+.+||+=--. +.| |. .++. .-..+++|+|+||.+++
T Consensus 66 ~~s~~~~~~a~~l~~~-g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~L 144 (313)
T KOG1455|consen 66 HSSWRYQSTAKRLAKS-GFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVAL 144 (313)
T ss_pred cchhhHHHHHHHHHhC-CCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHH
Confidence 3446788899999987 99999999984321 111 22 1111 44589999999999999
Q ss_pred HHHHHhccCCCCCCccceEEEeccccCCCCC
Q 037206 61 SMAFQASFDDLNGIKLSGIYLVQPYFGRNYG 91 (149)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~~ 91 (149)
.+..... ....|.+++.|.+-..+.
T Consensus 145 l~~~k~p------~~w~G~ilvaPmc~i~~~ 169 (313)
T KOG1455|consen 145 LIALKDP------NFWDGAILVAPMCKISED 169 (313)
T ss_pred HHHhhCC------cccccceeeecccccCCc
Confidence 8886522 247888888887766543
No 15
>PHA02857 monoglyceride lipase; Provisional
Probab=98.82 E-value=2.3e-07 Score=68.32 Aligned_cols=76 Identities=21% Similarity=0.267 Sum_probs=53.9
Q ss_pred CchhhHHHHHHHHhhCCCEEEEEccCCC---CCCCc--cc--cchh--------------cccEEEeecChhhHHHHHHH
Q 037206 5 FCSTYHNYVGSHSAKANVIVVSVDYRLA---PEHLL--GK--TLVL--------------ILLVFLRGNSAGGNIVHSMA 63 (149)
Q Consensus 5 ~~~~~~~~~~~la~~~g~~v~~vdYrla---Pe~~~--p~--~~~~--------------~~~i~l~G~SAGg~La~~~~ 63 (149)
....+..++..|++. |+.|+.+|+|-- +..++ +. .|+. ..+++++|+|.||.+++.++
T Consensus 37 ~~~~~~~~~~~l~~~-g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a 115 (276)
T PHA02857 37 HSGRYEELAENISSL-GILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAA 115 (276)
T ss_pred ccchHHHHHHHHHhC-CCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHH
Confidence 355677788889876 999999999943 22121 22 2221 25799999999999999888
Q ss_pred HHhccCCCCCCccceEEEeccccC
Q 037206 64 FQASFDDLNGIKLSGIYLVQPYFG 87 (149)
Q Consensus 64 ~~~~~~~~~~~~~~~~~l~~P~~~ 87 (149)
.... ..++++++++|...
T Consensus 116 ~~~p------~~i~~lil~~p~~~ 133 (276)
T PHA02857 116 YKNP------NLFTAMILMSPLVN 133 (276)
T ss_pred HhCc------cccceEEEeccccc
Confidence 5432 24789999998654
No 16
>PRK10566 esterase; Provisional
Probab=98.81 E-value=5.4e-08 Score=70.66 Aligned_cols=57 Identities=14% Similarity=0.142 Sum_probs=41.9
Q ss_pred hhHHHHHHHHhhCCCEEEEEccCCCCC-------CCcc-------c---------cchh------cccEEEeecChhhHH
Q 037206 8 TYHNYVGSHSAKANVIVVSVDYRLAPE-------HLLG-------K---------TLVL------ILLVFLRGNSAGGNI 58 (149)
Q Consensus 8 ~~~~~~~~la~~~g~~v~~vdYrlaPe-------~~~p-------~---------~~~~------~~~i~l~G~SAGg~L 58 (149)
.+..+++.|+++ |+.|+.+|||-... .++. . .|+. +++|+++|+|+||.+
T Consensus 42 ~~~~~~~~l~~~-G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~ 120 (249)
T PRK10566 42 VYSYFAVALAQA-GFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMT 120 (249)
T ss_pred hHHHHHHHHHhC-CCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHH
Confidence 466788888876 99999999986422 1111 0 2222 689999999999999
Q ss_pred HHHHHHH
Q 037206 59 VHSMAFQ 65 (149)
Q Consensus 59 a~~~~~~ 65 (149)
++.++..
T Consensus 121 al~~~~~ 127 (249)
T PRK10566 121 ALGIMAR 127 (249)
T ss_pred HHHHHHh
Confidence 9988754
No 17
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.79 E-value=7.7e-08 Score=68.91 Aligned_cols=88 Identities=24% Similarity=0.311 Sum_probs=60.8
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCCCCCCc------------------hH----HH-HHH
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGRNYGVV------------------DN----CW-VIY 100 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~~~~------------------~~----~~-~~~ 100 (149)
++||+++|+|-||.+|+.+++.... .+.|++.+++++-...... |. .+ +..
T Consensus 104 ~~ri~l~GFSQGa~~al~~~l~~p~------~~~gvv~lsG~~~~~~~~~~~~~~~~~~pi~~~hG~~D~vvp~~~~~~~ 177 (216)
T PF02230_consen 104 PSRIFLGGFSQGAAMALYLALRYPE------PLAGVVALSGYLPPESELEDRPEALAKTPILIIHGDEDPVVPFEWAEKT 177 (216)
T ss_dssp GGGEEEEEETHHHHHHHHHHHCTSS------TSSEEEEES---TTGCCCHCCHCCCCTS-EEEEEETT-SSSTHHHHHHH
T ss_pred hhheehhhhhhHHHHHHHHHHHcCc------CcCEEEEeeccccccccccccccccCCCcEEEEecCCCCcccHHHHHHH
Confidence 8999999999999999999876544 4889999998865432111 11 11 155
Q ss_pred HHHhcCCC-ceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhcc
Q 037206 101 FENCGWAG-ETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNRD 146 (149)
Q Consensus 101 ~~~l~~~~-~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~~ 146 (149)
.+.|++.+ +++++.|+|+.|.. ..+.++.+.+||+++
T Consensus 178 ~~~L~~~~~~v~~~~~~g~gH~i---------~~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 178 AEFLKAAGANVEFHEYPGGGHEI---------SPEELRDLREFLEKH 215 (216)
T ss_dssp HHHHHCTT-GEEEEEETT-SSS-----------HHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEEcCCCCCCC---------CHHHHHHHHHHHhhh
Confidence 55676554 89999999999955 236788889999876
No 18
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.77 E-value=4e-07 Score=69.63 Aligned_cols=70 Identities=21% Similarity=0.239 Sum_probs=47.7
Q ss_pred hHHHHHHHHhhCCCEEEEEccCCCCCCC----c-cc--cc-------hh---------cccEEEeecChhhHHHHHHHHH
Q 037206 9 YHNYVGSHSAKANVIVVSVDYRLAPEHL----L-GK--TL-------VL---------ILLVFLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 9 ~~~~~~~la~~~g~~v~~vdYrlaPe~~----~-p~--~~-------~~---------~~~i~l~G~SAGg~La~~~~~~ 65 (149)
+..++..|++. |+.|+.+|||--.... + +. .+ +. ..+++|+|+|.||.+++.++..
T Consensus 104 ~~~~~~~l~~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~ 182 (349)
T PLN02385 104 FEGIARKIASS-GYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLK 182 (349)
T ss_pred HHHHHHHHHhC-CCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHh
Confidence 35678888875 9999999999543221 1 22 11 11 1279999999999999988765
Q ss_pred hccCCCCCCccceEEEeccc
Q 037206 66 ASFDDLNGIKLSGIYLVQPY 85 (149)
Q Consensus 66 ~~~~~~~~~~~~~~~l~~P~ 85 (149)
..+ .++++++++|.
T Consensus 183 ~p~------~v~glVLi~p~ 196 (349)
T PLN02385 183 QPN------AWDGAILVAPM 196 (349)
T ss_pred Ccc------hhhheeEeccc
Confidence 332 36777777664
No 19
>PLN02442 S-formylglutathione hydrolase
Probab=98.77 E-value=1.8e-07 Score=69.80 Aligned_cols=91 Identities=14% Similarity=0.166 Sum_probs=62.7
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCCCCC-C-----------chHHHH-------------
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGRNYG-V-----------VDNCWV------------- 98 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~~-~-----------~~~~~~------------- 98 (149)
+++++++|+|+||++|+.++....+ .++++++++|.++.... . +...|.
T Consensus 142 ~~~~~i~G~S~GG~~a~~~a~~~p~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~~~~~~~ 215 (283)
T PLN02442 142 TSRASIFGHSMGGHGALTIYLKNPD------KYKSVSAFAPIANPINCPWGQKAFTNYLGSDKADWEEYDATELVSKFND 215 (283)
T ss_pred CCceEEEEEChhHHHHHHHHHhCch------hEEEEEEECCccCcccCchhhHHHHHHcCCChhhHHHcChhhhhhhccc
Confidence 7889999999999999998875432 47788888888764211 0 001111
Q ss_pred -----------------------HHHHHhcC-CCceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhccc
Q 037206 99 -----------------------IYFENCGW-AGETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNRDN 147 (149)
Q Consensus 99 -----------------------~~~~~l~~-~~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~~~ 147 (149)
.|.+.+++ +.++++++++|+.|+|. ....++++..+|..+++
T Consensus 216 ~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~-------~~~~~i~~~~~~~~~~~ 281 (283)
T PLN02442 216 VSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYF-------FIATFIDDHINHHAQAL 281 (283)
T ss_pred cCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHH-------HHHHHHHHHHHHHHHHh
Confidence 46666654 45999999999999885 33456666666666554
No 20
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.73 E-value=7.9e-07 Score=67.37 Aligned_cols=72 Identities=21% Similarity=0.207 Sum_probs=48.6
Q ss_pred hhHHHHHHHHhhCCCEEEEEccCCCCCCC-----ccc------------cchh------cccEEEeecChhhHHHHHHHH
Q 037206 8 TYHNYVGSHSAKANVIVVSVDYRLAPEHL-----LGK------------TLVL------ILLVFLRGNSAGGNIVHSMAF 64 (149)
Q Consensus 8 ~~~~~~~~la~~~g~~v~~vdYrlaPe~~-----~p~------------~~~~------~~~i~l~G~SAGg~La~~~~~ 64 (149)
.+..++..|+++ |+.|+.+|+|---+.. .+. +++. ..+++|+|+|.||.+++.++.
T Consensus 75 ~~~~~~~~L~~~-Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~ 153 (330)
T PLN02298 75 TFQSTAIFLAQM-GFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHL 153 (330)
T ss_pred ehhHHHHHHHhC-CCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHh
Confidence 355667788875 9999999999432211 122 1111 236999999999999988775
Q ss_pred HhccCCCCCCccceEEEecccc
Q 037206 65 QASFDDLNGIKLSGIYLVQPYF 86 (149)
Q Consensus 65 ~~~~~~~~~~~~~~~~l~~P~~ 86 (149)
... ..++++++++|+.
T Consensus 154 ~~p------~~v~~lvl~~~~~ 169 (330)
T PLN02298 154 ANP------EGFDGAVLVAPMC 169 (330)
T ss_pred cCc------ccceeEEEecccc
Confidence 322 2478888887754
No 21
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=98.65 E-value=8.5e-07 Score=69.61 Aligned_cols=73 Identities=12% Similarity=0.149 Sum_probs=52.9
Q ss_pred hhHHHHHHHHhhCCCEEEEEccCCCCCC-Ccc---c---------cchh------cccEEEeecChhhHHHHHHHHHhcc
Q 037206 8 TYHNYVGSHSAKANVIVVSVDYRLAPEH-LLG---K---------TLVL------ILLVFLRGNSAGGNIVHSMAFQASF 68 (149)
Q Consensus 8 ~~~~~~~~la~~~g~~v~~vdYrlaPe~-~~p---~---------~~~~------~~~i~l~G~SAGg~La~~~~~~~~~ 68 (149)
.+..++..++++ |+.|+.+|||-..+. ..+ . +|+. .+||+++|+|.||++++.++....
T Consensus 210 ~~~~~~~~La~~-Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p- 287 (414)
T PRK05077 210 YYRLFRDYLAPR-GIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEP- 287 (414)
T ss_pred hHHHHHHHHHhC-CCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCC-
Confidence 455667778776 999999999854332 111 1 3333 689999999999999998875432
Q ss_pred CCCCCCccceEEEeccccC
Q 037206 69 DDLNGIKLSGIYLVQPYFG 87 (149)
Q Consensus 69 ~~~~~~~~~~~~l~~P~~~ 87 (149)
.+++++|+++|.++
T Consensus 288 -----~ri~a~V~~~~~~~ 301 (414)
T PRK05077 288 -----PRLKAVACLGPVVH 301 (414)
T ss_pred -----cCceEEEEECCccc
Confidence 24888898888764
No 22
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.64 E-value=2.4e-07 Score=77.43 Aligned_cols=133 Identities=18% Similarity=0.050 Sum_probs=93.6
Q ss_pred hhhHHHHHHHHhhCCCEEEEEccCCCCCCC--ccc------------------cchh------cccEEEeecChhhHHHH
Q 037206 7 STYHNYVGSHSAKANVIVVSVDYRLAPEHL--LGK------------------TLVL------ILLVFLRGNSAGGNIVH 60 (149)
Q Consensus 7 ~~~~~~~~~la~~~g~~v~~vdYrlaPe~~--~p~------------------~~~~------~~~i~l~G~SAGg~La~ 60 (149)
...-.+...++...|++|+.+|||=.+-.- |.. +++. .+||+++|.|.||.+++
T Consensus 544 ~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~ 623 (755)
T KOG2100|consen 544 KFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTL 623 (755)
T ss_pred eEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHH
Confidence 344455666778889999999999765321 111 1121 99999999999999999
Q ss_pred HHHHHhccCCCCCCccceEEEeccccCCCCCCc-------------hHHHH-----------------------------
Q 037206 61 SMAFQASFDDLNGIKLSGIYLVQPYFGRNYGVV-------------DNCWV----------------------------- 98 (149)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~~~~-------------~~~~~----------------------------- 98 (149)
.++..... ...+|.+.++|+++...... +..+.
T Consensus 624 ~~l~~~~~-----~~fkcgvavaPVtd~~~yds~~terymg~p~~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~ 698 (755)
T KOG2100|consen 624 KLLESDPG-----DVFKCGVAVAPVTDWLYYDSTYTERYMGLPSENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVHF 698 (755)
T ss_pred HHhhhCcC-----ceEEEEEEecceeeeeeecccccHhhcCCCccccchhhhccccchhhhhccCCEEEEEcCCcCCcCH
Confidence 98754432 24677799999988762111 00011
Q ss_pred ----HHHHHhcC-CCceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhcccC
Q 037206 99 ----IYFENCGW-AGETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNRDNV 148 (149)
Q Consensus 99 ----~~~~~l~~-~~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~~~~ 148 (149)
.+.+.|+. ++++++.+||++.|++... ......+..+..|++.++.
T Consensus 699 q~s~~~~~aL~~~gv~~~~~vypde~H~is~~----~~~~~~~~~~~~~~~~~~~ 749 (755)
T KOG2100|consen 699 QQSAILIKALQNAGVPFRLLVYPDENHGISYV----EVISHLYEKLDRFLRDCFG 749 (755)
T ss_pred HHHHHHHHHHHHCCCceEEEEeCCCCcccccc----cchHHHHHHHHHHHHHHcC
Confidence 67777764 5599999999999998543 3446788999999987664
No 23
>PRK10115 protease 2; Provisional
Probab=98.61 E-value=5.4e-07 Score=74.81 Aligned_cols=78 Identities=18% Similarity=0.133 Sum_probs=58.5
Q ss_pred CchhhHHHHHHHHhhCCCEEEEEccCCCCCCC---------------ccc-----cchh------cccEEEeecChhhHH
Q 037206 5 FCSTYHNYVGSHSAKANVIVVSVDYRLAPEHL---------------LGK-----TLVL------ILLVFLRGNSAGGNI 58 (149)
Q Consensus 5 ~~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~---------------~p~-----~~~~------~~~i~l~G~SAGg~L 58 (149)
....|......|+.+ |++|+.++||=.-+.- |.+ +|+. ++||+++|.|+||.|
T Consensus 459 ~~p~f~~~~~~l~~r-G~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l 537 (686)
T PRK10115 459 IDADFSFSRLSLLDR-GFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGML 537 (686)
T ss_pred CCCCccHHHHHHHHC-CcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHH
Confidence 345566777788886 9999999999764421 111 4444 999999999999999
Q ss_pred HHHHHHHhccCCCCCCccceEEEeccccCCC
Q 037206 59 VHSMAFQASFDDLNGIKLSGIYLVQPYFGRN 89 (149)
Q Consensus 59 a~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~ 89 (149)
++.++.+..+ ..+++++..|++|+.
T Consensus 538 ~~~~~~~~Pd------lf~A~v~~vp~~D~~ 562 (686)
T PRK10115 538 MGVAINQRPE------LFHGVIAQVPFVDVV 562 (686)
T ss_pred HHHHHhcChh------heeEEEecCCchhHh
Confidence 9888754433 478999999988864
No 24
>PLN00021 chlorophyllase
Probab=98.60 E-value=2.4e-07 Score=70.13 Aligned_cols=81 Identities=22% Similarity=0.283 Sum_probs=59.3
Q ss_pred chhhHHHHHHHHhhCCCEEEEEcc-CCCCCCCccc--------cchh--------------cccEEEeecChhhHHHHHH
Q 037206 6 CSTYHNYVGSHSAKANVIVVSVDY-RLAPEHLLGK--------TLVL--------------ILLVFLRGNSAGGNIVHSM 62 (149)
Q Consensus 6 ~~~~~~~~~~la~~~g~~v~~vdY-rlaPe~~~p~--------~~~~--------------~~~i~l~G~SAGg~La~~~ 62 (149)
...|..+++.|++. |+.|+.+|+ ++.|+..... .|+. .++|+++|||.||.+++.+
T Consensus 65 ~~~y~~l~~~Las~-G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~l 143 (313)
T PLN00021 65 NSFYSQLLQHIASH-GFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFAL 143 (313)
T ss_pred cccHHHHHHHHHhC-CCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHH
Confidence 45688899999886 999999994 5555433222 4443 3789999999999999999
Q ss_pred HHHhccCCCCCCccceEEEeccccCC
Q 037206 63 AFQASFDDLNGIKLSGIYLVQPYFGR 88 (149)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~l~~P~~~~ 88 (149)
+....+... ..++++++++.|+...
T Consensus 144 A~~~~~~~~-~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 144 ALGKAAVSL-PLKFSALIGLDPVDGT 168 (313)
T ss_pred Hhhcccccc-ccceeeEEeecccccc
Confidence 976654321 2457888988887543
No 25
>PRK10749 lysophospholipase L2; Provisional
Probab=98.58 E-value=3e-06 Score=64.42 Aligned_cols=73 Identities=18% Similarity=0.107 Sum_probs=50.2
Q ss_pred hhhHHHHHHHHhhCCCEEEEEccCCCCCCC-----c-----cc--cchh--------------cccEEEeecChhhHHHH
Q 037206 7 STYHNYVGSHSAKANVIVVSVDYRLAPEHL-----L-----GK--TLVL--------------ILLVFLRGNSAGGNIVH 60 (149)
Q Consensus 7 ~~~~~~~~~la~~~g~~v~~vdYrlaPe~~-----~-----p~--~~~~--------------~~~i~l~G~SAGg~La~ 60 (149)
..|..++..++++ |+.|+.+|+|---... . .. .|+. ..+++++|+|.||.+++
T Consensus 68 ~~y~~~~~~l~~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~ 146 (330)
T PRK10749 68 VKYAELAYDLFHL-GYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILT 146 (330)
T ss_pred HHHHHHHHHHHHC-CCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHH
Confidence 3577888888875 9999999999422111 1 11 1111 36899999999999999
Q ss_pred HHHHHhccCCCCCCccceEEEecccc
Q 037206 61 SMAFQASFDDLNGIKLSGIYLVQPYF 86 (149)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~l~~P~~ 86 (149)
.++....+ .++++++.+|..
T Consensus 147 ~~a~~~p~------~v~~lvl~~p~~ 166 (330)
T PRK10749 147 LFLQRHPG------VFDAIALCAPMF 166 (330)
T ss_pred HHHHhCCC------CcceEEEECchh
Confidence 88865322 367777777753
No 26
>PRK11460 putative hydrolase; Provisional
Probab=98.57 E-value=3.1e-07 Score=66.63 Aligned_cols=73 Identities=12% Similarity=0.001 Sum_probs=48.8
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCCCC-----CCc--------hHH----H-HHHHHHhc
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGRNY-----GVV--------DNC----W-VIYFENCG 105 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~-----~~~--------~~~----~-~~~~~~l~ 105 (149)
++||+++|+|.||.+++.++.... ..+.+++.+++.+.... ..+ |.. + ....+.++
T Consensus 102 ~~~i~l~GfS~Gg~~al~~a~~~~------~~~~~vv~~sg~~~~~~~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~ 175 (232)
T PRK11460 102 ASATALIGFSQGAIMALEAVKAEP------GLAGRVIAFSGRYASLPETAPTATTIHLIHGGEDPVIDVAHAVAAQEALI 175 (232)
T ss_pred hhhEEEEEECHHHHHHHHHHHhCC------CcceEEEEeccccccccccccCCCcEEEEecCCCCccCHHHHHHHHHHHH
Confidence 578999999999999998876422 13556777777643111 011 111 1 15556666
Q ss_pred C-CCceEEEEeCCCCeee
Q 037206 106 W-AGETEIVETQGEDHVF 122 (149)
Q Consensus 106 ~-~~~v~~~~~~g~~H~f 122 (149)
+ +.++++++|+++.|.|
T Consensus 176 ~~g~~~~~~~~~~~gH~i 193 (232)
T PRK11460 176 SLGGDVTLDIVEDLGHAI 193 (232)
T ss_pred HCCCCeEEEEECCCCCCC
Confidence 5 4589999999999988
No 27
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.57 E-value=2.7e-07 Score=66.20 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=26.9
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEecc
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQP 84 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P 84 (149)
+++|.|+|.|-||-||+.++.... .++++|.++|
T Consensus 21 ~~~Igi~G~SkGaelALllAs~~~-------~i~avVa~~p 54 (213)
T PF08840_consen 21 PDKIGIIGISKGAELALLLASRFP-------QISAVVAISP 54 (213)
T ss_dssp -SSEEEEEETHHHHHHHHHHHHSS-------SEEEEEEES-
T ss_pred CCCEEEEEECHHHHHHHHHHhcCC-------CccEEEEeCC
Confidence 689999999999999999998754 2666666666
No 28
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.56 E-value=2.9e-07 Score=67.53 Aligned_cols=79 Identities=23% Similarity=0.358 Sum_probs=58.6
Q ss_pred chhhHHHHHHHHhhCCCEEEEEc-cCCCC-CCCccc-------cchh--------------cccEEEeecChhhHHHHHH
Q 037206 6 CSTYHNYVGSHSAKANVIVVSVD-YRLAP-EHLLGK-------TLVL--------------ILLVFLRGNSAGGNIVHSM 62 (149)
Q Consensus 6 ~~~~~~~~~~la~~~g~~v~~vd-YrlaP-e~~~p~-------~~~~--------------~~~i~l~G~SAGg~La~~~ 62 (149)
...|..+++++|+- |++||.+| |.+.+ ...... .|+. .+||.++|||.||-++..+
T Consensus 30 ~s~Ys~ll~hvASh-GyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~ 108 (259)
T PF12740_consen 30 NSWYSQLLEHVASH-GYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAM 108 (259)
T ss_pred HHHHHHHHHHHHhC-ceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHH
Confidence 34599999999986 99999999 44443 222111 6654 6799999999999999988
Q ss_pred HHHhccCCCCCCccceEEEecccc
Q 037206 63 AFQASFDDLNGIKLSGIYLVQPYF 86 (149)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~l~~P~~ 86 (149)
++....... ..++++++++-|+=
T Consensus 109 al~~~~~~~-~~~~~ali~lDPVd 131 (259)
T PF12740_consen 109 ALGNASSSL-DLRFSALILLDPVD 131 (259)
T ss_pred Hhhhccccc-ccceeEEEEecccc
Confidence 877644211 24688999999875
No 29
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=98.55 E-value=1.6e-06 Score=64.31 Aligned_cols=73 Identities=16% Similarity=0.088 Sum_probs=51.9
Q ss_pred hHHHHHHHHhhCCCEEEEEccCCCCCCC--c-----cc---------cchh---cccEEEeecChhhHHHHHHHHHhccC
Q 037206 9 YHNYVGSHSAKANVIVVSVDYRLAPEHL--L-----GK---------TLVL---ILLVFLRGNSAGGNIVHSMAFQASFD 69 (149)
Q Consensus 9 ~~~~~~~la~~~g~~v~~vdYrlaPe~~--~-----p~---------~~~~---~~~i~l~G~SAGg~La~~~~~~~~~~ 69 (149)
...+++.|+++ |+.|+.+|||-.-+.. + .. +|+. ..+|+++|+|.||.+++.++....
T Consensus 45 ~~~la~~La~~-Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p-- 121 (266)
T TIGR03101 45 VALQARAFAAG-GFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLA-- 121 (266)
T ss_pred HHHHHHHHHHC-CCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCc--
Confidence 34457777765 9999999999653221 1 11 2333 578999999999999998875532
Q ss_pred CCCCCccceEEEeccccCC
Q 037206 70 DLNGIKLSGIYLVQPYFGR 88 (149)
Q Consensus 70 ~~~~~~~~~~~l~~P~~~~ 88 (149)
..++++|+++|++..
T Consensus 122 ----~~v~~lVL~~P~~~g 136 (266)
T TIGR03101 122 ----AKCNRLVLWQPVVSG 136 (266)
T ss_pred ----cccceEEEeccccch
Confidence 247889999997663
No 30
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.51 E-value=4.6e-08 Score=76.72 Aligned_cols=81 Identities=27% Similarity=0.284 Sum_probs=55.8
Q ss_pred CCCCCchhhHHHHHHHHhhCCCEEEEEccCCCCCCCc--cc--------------------cchh---------cccEEE
Q 037206 1 MGSPFCSTYHNYVGSHSAKANVIVVSVDYRLAPEHLL--GK--------------------TLVL---------ILLVFL 49 (149)
Q Consensus 1 ~~s~~~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~--p~--------------------~~~~---------~~~i~l 49 (149)
+||++...|+. ..||++-+++||+++|||-+..=+ +. +|++ |+||.|
T Consensus 107 ~Gs~s~~~ydg--s~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl 184 (491)
T COG2272 107 MGSGSEPLYDG--SALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDNIEAFGGDPQNVTL 184 (491)
T ss_pred cCCCcccccCh--HHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHHHHHhCCCccceEE
Confidence 47777776664 678888559999999999654211 11 8887 999999
Q ss_pred eecChhhHHHHHHHHHhccCCCCCCccceEEEeccccC
Q 037206 50 RGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFG 87 (149)
Q Consensus 50 ~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~ 87 (149)
+|.||||..++.++..-..++ .++-.|+.||...
T Consensus 185 ~GeSAGa~si~~Lla~P~AkG----LF~rAi~~Sg~~~ 218 (491)
T COG2272 185 FGESAGAASILTLLAVPSAKG----LFHRAIALSGAAS 218 (491)
T ss_pred eeccchHHHHHHhhcCccchH----HHHHHHHhCCCCC
Confidence 999999988877764422221 2344455555543
No 31
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.51 E-value=7.8e-08 Score=76.70 Aligned_cols=71 Identities=24% Similarity=0.165 Sum_probs=49.8
Q ss_pred HHHHHhhCC-CEEEEEccCCCCCCC-------ccc-----------cchh---------cccEEEeecChhhHHHHHHHH
Q 037206 13 VGSHSAKAN-VIVVSVDYRLAPEHL-------LGK-----------TLVL---------ILLVFLRGNSAGGNIVHSMAF 64 (149)
Q Consensus 13 ~~~la~~~g-~~v~~vdYrlaPe~~-------~p~-----------~~~~---------~~~i~l~G~SAGg~La~~~~~ 64 (149)
...++++.+ ++|++++|||.|..- .|. +|++ ++||.|+|+||||++++.++.
T Consensus 116 ~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~ 195 (493)
T cd00312 116 GDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLL 195 (493)
T ss_pred hHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhh
Confidence 345666555 999999999977421 222 7776 999999999999999988876
Q ss_pred HhccCCCCCCccceEEEeccccC
Q 037206 65 QASFDDLNGIKLSGIYLVQPYFG 87 (149)
Q Consensus 65 ~~~~~~~~~~~~~~~~l~~P~~~ 87 (149)
..... ..+++.|+.++...
T Consensus 196 ~~~~~----~lf~~~i~~sg~~~ 214 (493)
T cd00312 196 SPDSK----GLFHRAISQSGSAL 214 (493)
T ss_pred Ccchh----HHHHHHhhhcCCcc
Confidence 53322 23566666665443
No 32
>COG1647 Esterase/lipase [General function prediction only]
Probab=98.50 E-value=6.4e-06 Score=58.84 Aligned_cols=76 Identities=13% Similarity=0.010 Sum_probs=56.4
Q ss_pred CCchhhHHHHHHHHhhCCCEEEEEccCC---CCCCC---ccccchh-------------cccEEEeecChhhHHHHHHHH
Q 037206 4 PFCSTYHNYVGSHSAKANVIVVSVDYRL---APEHL---LGKTLVL-------------ILLVFLRGNSAGGNIVHSMAF 64 (149)
Q Consensus 4 ~~~~~~~~~~~~la~~~g~~v~~vdYrl---aPe~~---~p~~~~~-------------~~~i~l~G~SAGg~La~~~~~ 64 (149)
|.+.+.+.+++.|.++ |+.|.+|.|+- .||.- -|..|.. -+.|++.|-|.||-+|+-++.
T Consensus 26 Gt~~Dvr~Lgr~L~e~-GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlSmGGv~alkla~ 104 (243)
T COG1647 26 GTPRDVRMLGRYLNEN-GYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLSMGGVFALKLAY 104 (243)
T ss_pred CCcHHHHHHHHHHHHC-CceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeecchhHHHHHHHh
Confidence 5567778888989877 99999999983 22211 1225544 789999999999999999985
Q ss_pred HhccCCCCCCccceEEEeccccCC
Q 037206 65 QASFDDLNGIKLSGIYLVQPYFGR 88 (149)
Q Consensus 65 ~~~~~~~~~~~~~~~~l~~P~~~~ 88 (149)
.. .+++++.+|+....
T Consensus 105 ~~--------p~K~iv~m~a~~~~ 120 (243)
T COG1647 105 HY--------PPKKIVPMCAPVNV 120 (243)
T ss_pred hC--------CccceeeecCCccc
Confidence 42 37888888877654
No 33
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.49 E-value=4e-06 Score=59.39 Aligned_cols=72 Identities=18% Similarity=0.173 Sum_probs=48.9
Q ss_pred CchhhHHHHHHHHhhCCCEEEEEccCCCCCCCccc-----------cc-hh-------cccEEEeecChhhHHHHHHHHH
Q 037206 5 FCSTYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK-----------TL-VL-------ILLVFLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 5 ~~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~-----------~~-~~-------~~~i~l~G~SAGg~La~~~~~~ 65 (149)
....+..++..|+ + |+.|+.+|+|-.-+..-|. ++ +. .++++++|+|.||.+++.++..
T Consensus 13 ~~~~~~~~~~~L~-~-~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~ 90 (251)
T TIGR03695 13 SGADWQALIELLG-P-HFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSMGGRIALYYALQ 90 (251)
T ss_pred chhhHHHHHHHhc-c-cCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEeccHHHHHHHHHHh
Confidence 3456677888887 4 8999999998543322211 33 22 6789999999999999999876
Q ss_pred hccCCCCCCccceEEEecc
Q 037206 66 ASFDDLNGIKLSGIYLVQP 84 (149)
Q Consensus 66 ~~~~~~~~~~~~~~~l~~P 84 (149)
..+ .++++++++|
T Consensus 91 ~~~------~v~~lil~~~ 103 (251)
T TIGR03695 91 YPE------RVQGLILESG 103 (251)
T ss_pred Cch------heeeeEEecC
Confidence 432 2455555444
No 34
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.47 E-value=6e-07 Score=71.88 Aligned_cols=67 Identities=28% Similarity=0.213 Sum_probs=46.8
Q ss_pred HHHhhCCCEEEEEccCCC-------CCCCcc-c-----------cchh---------cccEEEeecChhhHHHHHHHHHh
Q 037206 15 SHSAKANVIVVSVDYRLA-------PEHLLG-K-----------TLVL---------ILLVFLRGNSAGGNIVHSMAFQA 66 (149)
Q Consensus 15 ~la~~~g~~v~~vdYrla-------Pe~~~p-~-----------~~~~---------~~~i~l~G~SAGg~La~~~~~~~ 66 (149)
.++.+.+++||+++|||. ++..-| . +||+ |+||.|+|+||||..+..++..-
T Consensus 150 ~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp 229 (535)
T PF00135_consen 150 SLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSP 229 (535)
T ss_dssp HHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGG
T ss_pred ccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecc
Confidence 344445999999999983 455555 3 8888 99999999999999988887764
Q ss_pred ccCCCCCCccceEEEeccc
Q 037206 67 SFDDLNGIKLSGIYLVQPY 85 (149)
Q Consensus 67 ~~~~~~~~~~~~~~l~~P~ 85 (149)
..+ ..++..|+.|+.
T Consensus 230 ~~~----~LF~raI~~SGs 244 (535)
T PF00135_consen 230 SSK----GLFHRAILQSGS 244 (535)
T ss_dssp GGT----TSBSEEEEES--
T ss_pred ccc----cccccccccccc
Confidence 433 348889999984
No 35
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.43 E-value=1e-05 Score=63.20 Aligned_cols=76 Identities=22% Similarity=0.226 Sum_probs=51.1
Q ss_pred hhhHHHHHHHHhhCCCEEEEEccCCCCCCC----c-cc---------cchh-------cccEEEeecChhhHHHHHHHHH
Q 037206 7 STYHNYVGSHSAKANVIVVSVDYRLAPEHL----L-GK---------TLVL-------ILLVFLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 7 ~~~~~~~~~la~~~g~~v~~vdYrlaPe~~----~-p~---------~~~~-------~~~i~l~G~SAGg~La~~~~~~ 65 (149)
..+..++..|+++ |+.|+.+|||---... + +. .++. ..+++++|+|.||.+++.++..
T Consensus 150 ~~~~~~a~~L~~~-Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~~ 228 (395)
T PLN02652 150 GRYLHFAKQLTSC-GFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAASY 228 (395)
T ss_pred HHHHHHHHHHHHC-CCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHhc
Confidence 3467788888876 9999999999532211 1 12 1111 2369999999999999876542
Q ss_pred hccCCCCCCccceEEEeccccC
Q 037206 66 ASFDDLNGIKLSGIYLVQPYFG 87 (149)
Q Consensus 66 ~~~~~~~~~~~~~~~l~~P~~~ 87 (149)
.+ ....++++++.+|++.
T Consensus 229 -p~---~~~~v~glVL~sP~l~ 246 (395)
T PLN02652 229 -PS---IEDKLEGIVLTSPALR 246 (395)
T ss_pred -cC---cccccceEEEECcccc
Confidence 11 0235888999998754
No 36
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.35 E-value=4.5e-07 Score=64.65 Aligned_cols=130 Identities=14% Similarity=0.106 Sum_probs=84.4
Q ss_pred HHHHHHHHhhCCCEEEEEccCCC----CCCC---ccc------------------cchh----cccEEEeecChhhHHHH
Q 037206 10 HNYVGSHSAKANVIVVSVDYRLA----PEHL---LGK------------------TLVL----ILLVFLRGNSAGGNIVH 60 (149)
Q Consensus 10 ~~~~~~la~~~g~~v~~vdYrla----Pe~~---~p~------------------~~~~----~~~i~l~G~SAGg~La~ 60 (149)
+..+..+|.. |+.|+.+||-.- |+.+ +|. .|+. +.+|.++|.+-||-++.
T Consensus 57 r~~Adk~A~~-Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv 135 (242)
T KOG3043|consen 57 REGADKVALN-GYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVV 135 (242)
T ss_pred HHHHHHHhcC-CcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEE
Confidence 4456666666 999999999543 3311 111 4454 88999999999997655
Q ss_pred HHHHHhccCCCCCCccceEEEeccccCCCCCC-----c--------hHH-----HHHHHHHhcCCC--ceEEEEeCCCCe
Q 037206 61 SMAFQASFDDLNGIKLSGIYLVQPYFGRNYGV-----V--------DNC-----WVIYFENCGWAG--ETEIVETQGEDH 120 (149)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~~~-----~--------~~~-----~~~~~~~l~~~~--~v~~~~~~g~~H 120 (149)
.+... .+.+.+.++++|.+-..... | |.+ -..+.++++++. ..++++|+|+.|
T Consensus 136 ~~~~~-------~~~f~a~v~~hps~~d~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~H 208 (242)
T KOG3043|consen 136 TLSAK-------DPEFDAGVSFHPSFVDSADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGH 208 (242)
T ss_pred Eeecc-------chhheeeeEecCCcCChhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccc
Confidence 54421 12478888888865433211 0 211 115556777554 467999999999
Q ss_pred eeee--ecCCchh----HHHHHHHHHHHHhccc
Q 037206 121 VFYL--FNLDSEE----AVPLMDKLASFLNRDN 147 (149)
Q Consensus 121 ~f~~--~~~~~~~----~~~~~~~i~~fl~~~~ 147 (149)
||.. .....|+ .+++++++.+|++..+
T Consensus 209 Gf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 209 GFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred hhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 9985 3333443 4678888999998764
No 37
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.33 E-value=5.5e-06 Score=58.29 Aligned_cols=77 Identities=21% Similarity=0.205 Sum_probs=47.3
Q ss_pred CCCchhhHHHHHHHHhhC-CCEEEEEccCCCCCCCccc--cchh---cccEEEeecChhhHHHHHHHHHhccCCCCCCcc
Q 037206 3 SPFCSTYHNYVGSHSAKA-NVIVVSVDYRLAPEHLLGK--TLVL---ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKL 76 (149)
Q Consensus 3 s~~~~~~~~~~~~la~~~-g~~v~~vdYrlaPe~~~p~--~~~~---~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~ 76 (149)
|+.+.....+.+.+++.. ...+..+++...|+...-. +.+. +++++++|.|.||..|..++.+.. +
T Consensus 11 sp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~p~~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~--------~ 82 (187)
T PF05728_consen 11 SPQSFKAQALKQYFAEHGPDIQYPCPDLPPFPEEAIAQLEQLIEELKPENVVLIGSSLGGFYATYLAERYG--------L 82 (187)
T ss_pred CCCCHHHHHHHHHHHHhCCCceEECCCCCcCHHHHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhC--------C
Confidence 444555566666676641 2445555555443332222 2232 566999999999999999986543 2
Q ss_pred ceEEEeccccCC
Q 037206 77 SGIYLVQPYFGR 88 (149)
Q Consensus 77 ~~~~l~~P~~~~ 88 (149)
++ +++.|.+..
T Consensus 83 ~a-vLiNPav~p 93 (187)
T PF05728_consen 83 PA-VLINPAVRP 93 (187)
T ss_pred CE-EEEcCCCCH
Confidence 22 788887664
No 38
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.31 E-value=2.6e-05 Score=56.42 Aligned_cols=69 Identities=14% Similarity=0.096 Sum_probs=47.7
Q ss_pred chhhHHHHHHHHhhCCCEEEEEccCCCCCCCccc------------cchh---cccEEEeecChhhHHHHHHHHHhccCC
Q 037206 6 CSTYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK------------TLVL---ILLVFLRGNSAGGNIVHSMAFQASFDD 70 (149)
Q Consensus 6 ~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~------------~~~~---~~~i~l~G~SAGg~La~~~~~~~~~~~ 70 (149)
...+..++..|++ ++.|+.+|.|---+...+. .++. .+++.++|+|.||.+++.++....+
T Consensus 29 ~~~~~~~~~~l~~--~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~~~-- 104 (255)
T PRK10673 29 LDNLGVLARDLVN--DHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDALQIEKATFIGHSMGGKAVMALTALAPD-- 104 (255)
T ss_pred hhHHHHHHHHHhh--CCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceEEEEECHHHHHHHHHHHhCHh--
Confidence 3456677888865 6999999999643322222 1122 6789999999999999999865332
Q ss_pred CCCCccceEEEe
Q 037206 71 LNGIKLSGIYLV 82 (149)
Q Consensus 71 ~~~~~~~~~~l~ 82 (149)
.+++++++
T Consensus 105 ----~v~~lvli 112 (255)
T PRK10673 105 ----RIDKLVAI 112 (255)
T ss_pred ----hcceEEEE
Confidence 36666665
No 39
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.27 E-value=4.7e-06 Score=62.03 Aligned_cols=72 Identities=17% Similarity=0.128 Sum_probs=52.0
Q ss_pred hHHHHHHHHhhCCCEEEEEccCCCCCCCccc-------------cchh---------cccEEEeecChhhHHHHHHHHHh
Q 037206 9 YHNYVGSHSAKANVIVVSVDYRLAPEHLLGK-------------TLVL---------ILLVFLRGNSAGGNIVHSMAFQA 66 (149)
Q Consensus 9 ~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~-------------~~~~---------~~~i~l~G~SAGg~La~~~~~~~ 66 (149)
...+...+.++.++.|+.+||+-.....||. .++. .++|.++|+|.||++|..++...
T Consensus 54 ~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~ 133 (275)
T cd00707 54 ISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRL 133 (275)
T ss_pred HHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHh
Confidence 4455555655558999999998765555554 1222 47899999999999999998765
Q ss_pred ccCCCCCCccceEEEecccc
Q 037206 67 SFDDLNGIKLSGIYLVQPYF 86 (149)
Q Consensus 67 ~~~~~~~~~~~~~~l~~P~~ 86 (149)
.. ++..++++.|..
T Consensus 134 ~~------~v~~iv~LDPa~ 147 (275)
T cd00707 134 NG------KLGRITGLDPAG 147 (275)
T ss_pred cC------ccceeEEecCCc
Confidence 43 477888887753
No 40
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.21 E-value=1.5e-05 Score=55.59 Aligned_cols=75 Identities=20% Similarity=0.196 Sum_probs=56.2
Q ss_pred chhhHHHHHHHHhhCCCEEEEEccCCCCCCCcc-----c----------cchh---cccEEEeecChhhHHHHHHHHHhc
Q 037206 6 CSTYHNYVGSHSAKANVIVVSVDYRLAPEHLLG-----K----------TLVL---ILLVFLRGNSAGGNIVHSMAFQAS 67 (149)
Q Consensus 6 ~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p-----~----------~~~~---~~~i~l~G~SAGg~La~~~~~~~~ 67 (149)
...+..++..|+ + |+.|+.+|+|-.....-+ . +++. .++++++|+|.||.+++.++....
T Consensus 11 ~~~~~~~~~~l~-~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 88 (228)
T PF12697_consen 11 SESWDPLAEALA-R-GYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMIALRLAARYP 88 (228)
T ss_dssp GGGGHHHHHHHH-T-TSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHh-C-CCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccccccccccccccccccccccccccc
Confidence 467778888885 4 999999999954332221 1 2222 689999999999999999987643
Q ss_pred cCCCCCCccceEEEeccccCC
Q 037206 68 FDDLNGIKLSGIYLVQPYFGR 88 (149)
Q Consensus 68 ~~~~~~~~~~~~~l~~P~~~~ 88 (149)
+ .++++++++|....
T Consensus 89 ~------~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 89 D------RVKGLVLLSPPPPL 103 (228)
T ss_dssp G------GEEEEEEESESSSH
T ss_pred c------ccccceeecccccc
Confidence 3 48999999998753
No 41
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.15 E-value=0.00011 Score=54.73 Aligned_cols=72 Identities=15% Similarity=0.047 Sum_probs=50.2
Q ss_pred chhhHHHHHHHHhhCCCEEEEEccCCCCCCCcc--------------c------cchh---cccEEEeecChhhHHHHHH
Q 037206 6 CSTYHNYVGSHSAKANVIVVSVDYRLAPEHLLG--------------K------TLVL---ILLVFLRGNSAGGNIVHSM 62 (149)
Q Consensus 6 ~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p--------------~------~~~~---~~~i~l~G~SAGg~La~~~ 62 (149)
...+..+...|+++ +.|+.+|.|=.-..+.| . .++. .+++.++|+|.||.+++.+
T Consensus 42 ~~~w~~~~~~L~~~--~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~ 119 (294)
T PLN02824 42 ADHWRKNTPVLAKS--HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQA 119 (294)
T ss_pred hhHHHHHHHHHHhC--CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHH
Confidence 34566677888765 59999999954332211 1 2222 7899999999999999999
Q ss_pred HHHhccCCCCCCccceEEEeccc
Q 037206 63 AFQASFDDLNGIKLSGIYLVQPY 85 (149)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~l~~P~ 85 (149)
+....+ ++++++++.|.
T Consensus 120 a~~~p~------~v~~lili~~~ 136 (294)
T PLN02824 120 AVDAPE------LVRGVMLINIS 136 (294)
T ss_pred HHhChh------heeEEEEECCC
Confidence 876443 37777777653
No 42
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.15 E-value=4.8e-05 Score=53.31 Aligned_cols=129 Identities=16% Similarity=0.219 Sum_probs=81.0
Q ss_pred CCCCchhhHHHHHHHHhhCCCEEEEEccCCC--CCCCccc------------cchh-----cccEEEeecChhhHHHHHH
Q 037206 2 GSPFCSTYHNYVGSHSAKANVIVVSVDYRLA--PEHLLGK------------TLVL-----ILLVFLRGNSAGGNIVHSM 62 (149)
Q Consensus 2 ~s~~~~~~~~~~~~la~~~g~~v~~vdYrla--Pe~~~p~------------~~~~-----~~~i~l~G~SAGg~La~~~ 62 (149)
|+...+.-..+++.+.+. |+.++=+|||-- -+..|.. +|+. .....++|+|-|+.+++.+
T Consensus 42 Gtm~nkvv~~la~~l~~~-G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~l 120 (210)
T COG2945 42 GTMNNKVVQTLARALVKR-GFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQL 120 (210)
T ss_pred CccCCHHHHHHHHHHHhC-CceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHH
Confidence 344455556666777665 999999999973 3455554 8888 2223689999999999999
Q ss_pred HHHhccCCCCCCccceEEEeccccC---CCCCCc----------h-HHHHHHHHHhcC--CCceEEEEeCCCCeeeeeec
Q 037206 63 AFQASFDDLNGIKLSGIYLVQPYFG---RNYGVV----------D-NCWVIYFENCGW--AGETEIVETQGEDHVFYLFN 126 (149)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~l~~P~~~---~~~~~~----------~-~~~~~~~~~l~~--~~~v~~~~~~g~~H~f~~~~ 126 (149)
+.+..+. ...+...|.+. .+...+ + ..-...++.+++ ..+.++++.+|..| |+..
T Consensus 121 a~r~~e~-------~~~is~~p~~~~~dfs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~~~~~i~i~~a~H-FF~g- 191 (210)
T COG2945 121 AMRRPEI-------LVFISILPPINAYDFSFLAPCPSPGLVIQGDADDVVDLVAVLKWQESIKITVITIPGADH-FFHG- 191 (210)
T ss_pred HHhcccc-------cceeeccCCCCchhhhhccCCCCCceeEecChhhhhcHHHHHHhhcCCCCceEEecCCCc-eecc-
Confidence 9876543 23333333333 111110 0 111145555553 34899999999999 6553
Q ss_pred CCchhHHHHHHHHHHHHh
Q 037206 127 LDSEEAVPLMDKLASFLN 144 (149)
Q Consensus 127 ~~~~~~~~~~~~i~~fl~ 144 (149)
+.....+.+.+|+.
T Consensus 192 ----Kl~~l~~~i~~~l~ 205 (210)
T COG2945 192 ----KLIELRDTIADFLE 205 (210)
T ss_pred ----cHHHHHHHHHHHhh
Confidence 23456777888883
No 43
>PRK10985 putative hydrolase; Provisional
Probab=98.09 E-value=2.7e-05 Score=59.07 Aligned_cols=75 Identities=16% Similarity=0.194 Sum_probs=50.6
Q ss_pred hHHHHHHHHhhCCCEEEEEccCCCCCC--Cccc--------------cchh----cccEEEeecChhhHHHHHHHHHhcc
Q 037206 9 YHNYVGSHSAKANVIVVSVDYRLAPEH--LLGK--------------TLVL----ILLVFLRGNSAGGNIVHSMAFQASF 68 (149)
Q Consensus 9 ~~~~~~~la~~~g~~v~~vdYrlaPe~--~~p~--------------~~~~----~~~i~l~G~SAGg~La~~~~~~~~~ 68 (149)
.+.++..++++ |+.|+.+|||-.-.. +.+. +|+. ..+++++|+|.||++++..+.....
T Consensus 76 ~~~~~~~l~~~-G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~ 154 (324)
T PRK10985 76 AHGLLEAAQKR-GWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGD 154 (324)
T ss_pred HHHHHHHHHHC-CCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCC
Confidence 34577777765 999999999964221 1111 3333 4689999999999987777655332
Q ss_pred CCCCCCccceEEEeccccCC
Q 037206 69 DDLNGIKLSGIYLVQPYFGR 88 (149)
Q Consensus 69 ~~~~~~~~~~~~l~~P~~~~ 88 (149)
+ ..+.++++++|.++.
T Consensus 155 ~----~~~~~~v~i~~p~~~ 170 (324)
T PRK10985 155 D----LPLDAAVIVSAPLML 170 (324)
T ss_pred C----CCccEEEEEcCCCCH
Confidence 1 247788888877653
No 44
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.08 E-value=2.5e-05 Score=58.88 Aligned_cols=77 Identities=25% Similarity=0.311 Sum_probs=57.5
Q ss_pred chhhHHHHHHHHhhCCCEEEEEccCCCCCCC------ccc--cch-------h-------cccEEEeecChhhHHHHHHH
Q 037206 6 CSTYHNYVGSHSAKANVIVVSVDYRLAPEHL------LGK--TLV-------L-------ILLVFLRGNSAGGNIVHSMA 63 (149)
Q Consensus 6 ~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~------~p~--~~~-------~-------~~~i~l~G~SAGg~La~~~~ 63 (149)
...|..++..|+.+ |+.|+..|-|--...+ .+. .|+ . ..+++++|||+||.|++..+
T Consensus 47 ~~ry~~la~~l~~~-G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~ 125 (298)
T COG2267 47 SGRYEELADDLAAR-GFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYL 125 (298)
T ss_pred HHHHHHHHHHHHhC-CCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHH
Confidence 35677788889887 9999999998533222 111 222 1 58899999999999999988
Q ss_pred HHhccCCCCCCccceEEEeccccCCC
Q 037206 64 FQASFDDLNGIKLSGIYLVQPYFGRN 89 (149)
Q Consensus 64 ~~~~~~~~~~~~~~~~~l~~P~~~~~ 89 (149)
.... ..+.+++|.+|++...
T Consensus 126 ~~~~------~~i~~~vLssP~~~l~ 145 (298)
T COG2267 126 ARYP------PRIDGLVLSSPALGLG 145 (298)
T ss_pred HhCC------ccccEEEEECccccCC
Confidence 7654 3589999999987766
No 45
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.06 E-value=2.5e-05 Score=63.47 Aligned_cols=121 Identities=16% Similarity=0.054 Sum_probs=76.7
Q ss_pred HHHHhhCCCEEEEEccCCCCCC--Cccc------------------cchh-------cccEEEeecChhhHHHHHHHHHh
Q 037206 14 GSHSAKANVIVVSVDYRLAPEH--LLGK------------------TLVL-------ILLVFLRGNSAGGNIVHSMAFQA 66 (149)
Q Consensus 14 ~~la~~~g~~v~~vdYrlaPe~--~~p~------------------~~~~-------~~~i~l~G~SAGg~La~~~~~~~ 66 (149)
.+||+. |++|+.||=|-.-.. +|.. +|+. .+||+|-|.|-||.|+++...+.
T Consensus 670 ~~Lasl-Gy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~ 748 (867)
T KOG2281|consen 670 CRLASL-GYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQY 748 (867)
T ss_pred hhhhhc-ceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcC
Confidence 456665 999999999965321 2222 4544 99999999999999999988654
Q ss_pred ccCCCCCCccceEEEeccccCCCCCC----------c--------------------hH---------------HHH---
Q 037206 67 SFDDLNGIKLSGIYLVQPYFGRNYGV----------V--------------------DN---------------CWV--- 98 (149)
Q Consensus 67 ~~~~~~~~~~~~~~l~~P~~~~~~~~----------~--------------------~~---------------~~~--- 98 (149)
.+- .++.|.-.|+.+...-. | +. .+.
T Consensus 749 P~I------frvAIAGapVT~W~~YDTgYTERYMg~P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts 822 (867)
T KOG2281|consen 749 PNI------FRVAIAGAPVTDWRLYDTGYTERYMGYPDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTS 822 (867)
T ss_pred cce------eeEEeccCcceeeeeecccchhhhcCCCccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHH
Confidence 332 45556666654432110 0 00 000
Q ss_pred HHHHHh-cCCCceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhc
Q 037206 99 IYFENC-GWAGETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNR 145 (149)
Q Consensus 99 ~~~~~l-~~~~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~ 145 (149)
.+...| ++|.+.++++||++.|+--. .+...-.-.++..|+.+
T Consensus 823 ~Lvs~lvkagKpyeL~IfP~ERHsiR~----~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 823 RLVSALVKAGKPYELQIFPNERHSIRN----PESGIYYEARLLHFLQE 866 (867)
T ss_pred HHHHHHHhCCCceEEEEccccccccCC----CccchhHHHHHHHHHhh
Confidence 344444 56679999999999996522 22333444567888765
No 46
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.04 E-value=0.00018 Score=55.05 Aligned_cols=72 Identities=21% Similarity=0.237 Sum_probs=48.6
Q ss_pred chhhHHHHHHHHhhCCCEEEEEccCCCCCCCc----cc-----cch----h---cccEEEeecChhhHHHHHHHHHhccC
Q 037206 6 CSTYHNYVGSHSAKANVIVVSVDYRLAPEHLL----GK-----TLV----L---ILLVFLRGNSAGGNIVHSMAFQASFD 69 (149)
Q Consensus 6 ~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~----p~-----~~~----~---~~~i~l~G~SAGg~La~~~~~~~~~~ 69 (149)
...+..+...|.+ ++.|+.+|+|-..+..- .. +.+ . ..++++.|+|.||.+++.++....
T Consensus 144 ~~~~~~~~~~l~~--~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~-- 219 (371)
T PRK14875 144 LNNWLFNHAALAA--GRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAP-- 219 (371)
T ss_pred cchHHHHHHHHhc--CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCc--
Confidence 3445566666754 49999999986543311 11 111 1 678999999999999998886532
Q ss_pred CCCCCccceEEEeccc
Q 037206 70 DLNGIKLSGIYLVQPY 85 (149)
Q Consensus 70 ~~~~~~~~~~~l~~P~ 85 (149)
.++.++++++|.
T Consensus 220 ----~~v~~lv~~~~~ 231 (371)
T PRK14875 220 ----QRVASLTLIAPA 231 (371)
T ss_pred ----hheeEEEEECcC
Confidence 246777777764
No 47
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.98 E-value=7.1e-05 Score=54.65 Aligned_cols=121 Identities=19% Similarity=0.189 Sum_probs=80.6
Q ss_pred hhHHHHHHHHhhCCCEEEEEccCCCCC--------CCccc-----cchh-----cccEEEeecChhhHHHHHHHHHhccC
Q 037206 8 TYHNYVGSHSAKANVIVVSVDYRLAPE--------HLLGK-----TLVL-----ILLVFLRGNSAGGNIVHSMAFQASFD 69 (149)
Q Consensus 8 ~~~~~~~~la~~~g~~v~~vdYrlaPe--------~~~p~-----~~~~-----~~~i~l~G~SAGg~La~~~~~~~~~~ 69 (149)
+...+...+...+++.|+..||+-.-. +.+.+ +|+. .++|+|+|.|.|..-++.++.+.
T Consensus 75 q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~--- 151 (258)
T KOG1552|consen 75 QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRY--- 151 (258)
T ss_pred HHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcC---
Confidence 455677778888899999999995421 22222 7777 59999999999998877776432
Q ss_pred CCCCCccceEEEeccccCCCCCCc---h-HHH----H-----------------------------HHHHHhcCCCceEE
Q 037206 70 DLNGIKLSGIYLVQPYFGRNYGVV---D-NCW----V-----------------------------IYFENCGWAGETEI 112 (149)
Q Consensus 70 ~~~~~~~~~~~l~~P~~~~~~~~~---~-~~~----~-----------------------------~~~~~l~~~~~v~~ 112 (149)
+ ++|+||.+|+++.....- + .+| . ++.++.+ .+++-
T Consensus 152 ----~-~~alVL~SPf~S~~rv~~~~~~~~~~~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k--~~~ep 224 (258)
T KOG1552|consen 152 ----P-LAAVVLHSPFTSGMRVAFPDTKTTYCFDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCK--EKVEP 224 (258)
T ss_pred ----C-cceEEEeccchhhhhhhccCcceEEeeccccccCcceeccCCEEEEecccCceecccccHHHHHhcc--ccCCC
Confidence 2 799999999877543210 0 000 0 5555554 35788
Q ss_pred EEeCCCCeeeeeecCCchhHHHHHHHHHHHHh
Q 037206 113 VETQGEDHVFYLFNLDSEEAVPLMDKLASFLN 144 (149)
Q Consensus 113 ~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~ 144 (149)
....|.+|...... + +.++.+.+|+.
T Consensus 225 l~v~g~gH~~~~~~---~---~yi~~l~~f~~ 250 (258)
T KOG1552|consen 225 LWVKGAGHNDIELY---P---EYIEHLRRFIS 250 (258)
T ss_pred cEEecCCCcccccC---H---HHHHHHHHHHH
Confidence 88889999775543 2 45555555554
No 48
>PRK13604 luxD acyl transferase; Provisional
Probab=97.95 E-value=4.9e-05 Score=57.33 Aligned_cols=71 Identities=14% Similarity=0.006 Sum_probs=52.8
Q ss_pred hhHHHHHHHHhhCCCEEEEEccCCC-C--CCCccc--------------cchh---cccEEEeecChhhHHHHHHHHHhc
Q 037206 8 TYHNYVGSHSAKANVIVVSVDYRLA-P--EHLLGK--------------TLVL---ILLVFLRGNSAGGNIVHSMAFQAS 67 (149)
Q Consensus 8 ~~~~~~~~la~~~g~~v~~vdYrla-P--e~~~p~--------------~~~~---~~~i~l~G~SAGg~La~~~~~~~~ 67 (149)
.+..+++.|+++ |+.|+..|+|-. - +..|.. +|+. .++|+|.|+|.||..+..++.
T Consensus 52 ~~~~~A~~La~~-G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~--- 127 (307)
T PRK13604 52 HFAGLAEYLSSN-GFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVIN--- 127 (307)
T ss_pred HHHHHHHHHHHC-CCEEEEecCCCCCCCCCCccccCcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhc---
Confidence 478889999876 999999997632 2 334422 6666 789999999999999755542
Q ss_pred cCCCCCCccceEEEeccccC
Q 037206 68 FDDLNGIKLSGIYLVQPYFG 87 (149)
Q Consensus 68 ~~~~~~~~~~~~~l~~P~~~ 87 (149)
+ ..++++|+.+|+.+
T Consensus 128 ~-----~~v~~lI~~sp~~~ 142 (307)
T PRK13604 128 E-----IDLSFLITAVGVVN 142 (307)
T ss_pred C-----CCCCEEEEcCCccc
Confidence 1 13788899999877
No 49
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=97.94 E-value=7.3e-05 Score=55.45 Aligned_cols=74 Identities=12% Similarity=0.150 Sum_probs=52.4
Q ss_pred hhhHHHHHHHHhhCCCEEEEEccCCCCCC-----Cccc---------cchh-----cccEEEeecChhhHHHHHHHHHhc
Q 037206 7 STYHNYVGSHSAKANVIVVSVDYRLAPEH-----LLGK---------TLVL-----ILLVFLRGNSAGGNIVHSMAFQAS 67 (149)
Q Consensus 7 ~~~~~~~~~la~~~g~~v~~vdYrlaPe~-----~~p~---------~~~~-----~~~i~l~G~SAGg~La~~~~~~~~ 67 (149)
..+..+++.|+++ |+.|+.+|+|---+. .+.. +++. .++|+++|+|.||.+++.++..
T Consensus 44 ~~~~~la~~l~~~-G~~v~~~Dl~G~G~S~~~~~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-- 120 (274)
T TIGR03100 44 RQFVLLARRLAEA-GFPVLRFDYRGMGDSEGENLGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-- 120 (274)
T ss_pred hHHHHHHHHHHHC-CCEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh--
Confidence 3456678888876 999999999853321 1111 3332 2679999999999998887642
Q ss_pred cCCCCCCccceEEEeccccCC
Q 037206 68 FDDLNGIKLSGIYLVQPYFGR 88 (149)
Q Consensus 68 ~~~~~~~~~~~~~l~~P~~~~ 88 (149)
. ..++++++++|++..
T Consensus 121 ~-----~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 121 D-----LRVAGLVLLNPWVRT 136 (274)
T ss_pred C-----CCccEEEEECCccCC
Confidence 1 358999999998654
No 50
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=97.94 E-value=2.8e-05 Score=59.58 Aligned_cols=74 Identities=14% Similarity=0.093 Sum_probs=53.0
Q ss_pred hHHHHHHHHhhCCCEEEEEccCCCCCC--Ccc--c----------cchh----cccEEEeecChhhHHHHHHHHHhccCC
Q 037206 9 YHNYVGSHSAKANVIVVSVDYRLAPEH--LLG--K----------TLVL----ILLVFLRGNSAGGNIVHSMAFQASFDD 70 (149)
Q Consensus 9 ~~~~~~~la~~~g~~v~~vdYrlaPe~--~~p--~----------~~~~----~~~i~l~G~SAGg~La~~~~~~~~~~~ 70 (149)
...+++.|+++ |+.|+.+|||-.... .+. . +++. .++|.++|+|.||.+++.++....
T Consensus 83 ~~~~~~~L~~~-G~~V~~~D~~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~--- 158 (350)
T TIGR01836 83 DRSLVRGLLER-GQDVYLIDWGYPDRADRYLTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYP--- 158 (350)
T ss_pred CchHHHHHHHC-CCeEEEEeCCCCCHHHhcCCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCc---
Confidence 35788888876 999999999864321 111 1 2232 578999999999999988875432
Q ss_pred CCCCccceEEEeccccCCC
Q 037206 71 LNGIKLSGIYLVQPYFGRN 89 (149)
Q Consensus 71 ~~~~~~~~~~l~~P~~~~~ 89 (149)
..+++++++.|.++..
T Consensus 159 ---~~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 159 ---DKIKNLVTMVTPVDFE 174 (350)
T ss_pred ---hheeeEEEeccccccC
Confidence 2478888888877753
No 51
>COG0400 Predicted esterase [General function prediction only]
Probab=97.94 E-value=3.3e-05 Score=55.22 Aligned_cols=87 Identities=17% Similarity=0.130 Sum_probs=60.5
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCCCCCCc---------------hHH-----HHHHHHH
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGRNYGVV---------------DNC-----WVIYFEN 103 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~~~~---------------~~~-----~~~~~~~ 103 (149)
++||++.|+|-||++++.+.+.... .++++++++|.+-...... |+. -.+..+.
T Consensus 98 ~~~ii~~GfSqGA~ial~~~l~~~~------~~~~ail~~g~~~~~~~~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~ 171 (207)
T COG0400 98 SSRIILIGFSQGANIALSLGLTLPG------LFAGAILFSGMLPLEPELLPDLAGTPILLSHGTEDPVVPLALAEALAEY 171 (207)
T ss_pred hhheEEEecChHHHHHHHHHHhCch------hhccchhcCCcCCCCCccccccCCCeEEEeccCcCCccCHHHHHHHHHH
Confidence 7999999999999999999977654 3788888888766543211 211 1155555
Q ss_pred hc-CCCceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhcc
Q 037206 104 CG-WAGETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNRD 146 (149)
Q Consensus 104 l~-~~~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~~ 146 (149)
++ .+.+|+.+.++ +.|.-. .+.++.+.+|+.+.
T Consensus 172 l~~~g~~v~~~~~~-~GH~i~---------~e~~~~~~~wl~~~ 205 (207)
T COG0400 172 LTASGADVEVRWHE-GGHEIP---------PEELEAARSWLANT 205 (207)
T ss_pred HHHcCCCEEEEEec-CCCcCC---------HHHHHHHHHHHHhc
Confidence 55 45599999999 899541 24556666677654
No 52
>PRK11071 esterase YqiA; Provisional
Probab=97.90 E-value=0.0003 Score=49.54 Aligned_cols=66 Identities=18% Similarity=0.108 Sum_probs=41.6
Q ss_pred HHHHHhh-CCCEEEEEccCCCCCCCccc--cchh---cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEecccc
Q 037206 13 VGSHSAK-ANVIVVSVDYRLAPEHLLGK--TLVL---ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYF 86 (149)
Q Consensus 13 ~~~la~~-~g~~v~~vdYrlaPe~~~p~--~~~~---~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~ 86 (149)
...+++. .++.|+.+|.+--|+.-... +++. .++++++|+|.||.+++.++.... . ..++++|..
T Consensus 23 ~~~l~~~~~~~~v~~~dl~g~~~~~~~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~--------~-~~vl~~~~~ 93 (190)
T PRK11071 23 KNWLAQHHPDIEMIVPQLPPYPADAAELLESLVLEHGGDPLGLVGSSLGGYYATWLSQCFM--------L-PAVVVNPAV 93 (190)
T ss_pred HHHHHHhCCCCeEEeCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHcC--------C-CEEEECCCC
Confidence 3444432 37899999987432110000 2222 678999999999999999987532 1 246777766
Q ss_pred C
Q 037206 87 G 87 (149)
Q Consensus 87 ~ 87 (149)
+
T Consensus 94 ~ 94 (190)
T PRK11071 94 R 94 (190)
T ss_pred C
Confidence 5
No 53
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.88 E-value=7.4e-05 Score=53.27 Aligned_cols=68 Identities=15% Similarity=0.060 Sum_probs=46.3
Q ss_pred HHHHHhhCCCEEEEEccCCCC-----------CC--Cccc---------cchh------cccEEEeecChhhHHHHHHHH
Q 037206 13 VGSHSAKANVIVVSVDYRLAP-----------EH--LLGK---------TLVL------ILLVFLRGNSAGGNIVHSMAF 64 (149)
Q Consensus 13 ~~~la~~~g~~v~~vdYrlaP-----------e~--~~p~---------~~~~------~~~i~l~G~SAGg~La~~~~~ 64 (149)
...++++.|+.|+.+||+-.- .. .... +++. ++||+|+|+|+||.+++.++.
T Consensus 35 ~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~ 114 (212)
T TIGR01840 35 WKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGC 114 (212)
T ss_pred hHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHH
Confidence 455667779999999997521 10 0001 2222 689999999999999999987
Q ss_pred HhccCCCCCCccceEEEecccc
Q 037206 65 QASFDDLNGIKLSGIYLVQPYF 86 (149)
Q Consensus 65 ~~~~~~~~~~~~~~~~l~~P~~ 86 (149)
...+ .+++++.+++..
T Consensus 115 ~~p~------~~~~~~~~~g~~ 130 (212)
T TIGR01840 115 TYPD------VFAGGASNAGLP 130 (212)
T ss_pred hCch------hheEEEeecCCc
Confidence 5433 367777777653
No 54
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=97.87 E-value=0.0008 Score=51.24 Aligned_cols=38 Identities=16% Similarity=0.174 Sum_probs=31.3
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCC
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGR 88 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~ 88 (149)
.+||++.|.|-||.+++.++.. .+++++++..+|++..
T Consensus 174 ~~rI~v~G~SqGG~lal~~aaL-------d~rv~~~~~~vP~l~d 211 (320)
T PF05448_consen 174 GKRIGVTGGSQGGGLALAAAAL-------DPRVKAAAADVPFLCD 211 (320)
T ss_dssp EEEEEEEEETHHHHHHHHHHHH-------SST-SEEEEESESSSS
T ss_pred cceEEEEeecCchHHHHHHHHh-------CccccEEEecCCCccc
Confidence 8899999999999999998864 2359999999998653
No 55
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=97.86 E-value=0.00025 Score=55.19 Aligned_cols=98 Identities=16% Similarity=0.144 Sum_probs=51.2
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCCCCCC-------c-------hHHHH-HHHH--Hh-c
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGRNYGV-------V-------DNCWV-IYFE--NC-G 105 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~~~-------~-------~~~~~-~~~~--~l-~ 105 (149)
.++|.++|||-||.-++.++... .++++.|++=||.-+-... | +..|. ...+ +. .
T Consensus 227 ~~~i~~~GHSFGGATa~~~l~~d-------~r~~~~I~LD~W~~Pl~~~~~~~i~~P~L~InSe~f~~~~~~~~~~~~~~ 299 (379)
T PF03403_consen 227 LSRIGLAGHSFGGATALQALRQD-------TRFKAGILLDPWMFPLGDEIYSKIPQPLLFINSESFQWWENIFRMKKVIS 299 (379)
T ss_dssp EEEEEEEEETHHHHHHHHHHHH--------TT--EEEEES---TTS-GGGGGG--S-EEEEEETTT--HHHHHHHHTT--
T ss_pred hhheeeeecCchHHHHHHHHhhc-------cCcceEEEeCCcccCCCcccccCCCCCEEEEECcccCChhhHHHHHHHhc
Confidence 67899999999998888766543 3578899998886532211 1 11222 2222 22 2
Q ss_pred CCCceEEEEeCCCCeeeee----ecCC------------ch-h-HHHHHHHHHHHHhcccC
Q 037206 106 WAGETEIVETQGEDHVFYL----FNLD------------SE-E-AVPLMDKLASFLNRDNV 148 (149)
Q Consensus 106 ~~~~v~~~~~~g~~H~f~~----~~~~------------~~-~-~~~~~~~i~~fl~~~~~ 148 (149)
......+..+.|..|.-+. +.|. .+ . .+...+.+++||+++++
T Consensus 300 ~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L~ 360 (379)
T PF03403_consen 300 NNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERALRINNRASLAFLRRHLG 360 (379)
T ss_dssp TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHhcC
Confidence 3346788999999985322 2221 01 1 23355668899998854
No 56
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=97.84 E-value=8.9e-05 Score=53.06 Aligned_cols=79 Identities=18% Similarity=0.132 Sum_probs=59.5
Q ss_pred CCCCchhhHHHHHHHHhhCCCEEEEEccCCCC-CCCccc-------cchh------cc-cEEEeecChhhHHHHHHHHHh
Q 037206 2 GSPFCSTYHNYVGSHSAKANVIVVSVDYRLAP-EHLLGK-------TLVL------IL-LVFLRGNSAGGNIVHSMAFQA 66 (149)
Q Consensus 2 ~s~~~~~~~~~~~~la~~~g~~v~~vdYrlaP-e~~~p~-------~~~~------~~-~i~l~G~SAGg~La~~~~~~~ 66 (149)
+.|....|..+++.+..+ .+.|+.++++-.. ..+.+. .|+. ++ .+.++|+|.||.||..+|..+
T Consensus 9 ~gG~~~~y~~la~~l~~~-~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~L 87 (229)
T PF00975_consen 9 AGGSASSYRPLARALPDD-VIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGGILAFEMARQL 87 (229)
T ss_dssp TTCSGGGGHHHHHHHTTT-EEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHhCCCC-eEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccHHHHHHHHHHH
Confidence 456788899999999876 6889999998763 222222 3333 55 999999999999999999998
Q ss_pred ccCCCCCCccceEEEecc
Q 037206 67 SFDDLNGIKLSGIYLVQP 84 (149)
Q Consensus 67 ~~~~~~~~~~~~~~l~~P 84 (149)
.+.+ ..+..++++-.
T Consensus 88 e~~G---~~v~~l~liD~ 102 (229)
T PF00975_consen 88 EEAG---EEVSRLILIDS 102 (229)
T ss_dssp HHTT----SESEEEEESC
T ss_pred HHhh---hccCceEEecC
Confidence 8863 45777777763
No 57
>PLN02511 hydrolase
Probab=97.75 E-value=0.00025 Score=55.30 Aligned_cols=73 Identities=18% Similarity=0.119 Sum_probs=48.3
Q ss_pred HHHHHHHHhhCCCEEEEEccCCCCCCCc--cc--------------cchh----cccEEEeecChhhHHHHHHHHHhccC
Q 037206 10 HNYVGSHSAKANVIVVSVDYRLAPEHLL--GK--------------TLVL----ILLVFLRGNSAGGNIVHSMAFQASFD 69 (149)
Q Consensus 10 ~~~~~~la~~~g~~v~~vdYrlaPe~~~--p~--------------~~~~----~~~i~l~G~SAGg~La~~~~~~~~~~ 69 (149)
..++..+.+ .|+.|+.+|+|-.-..+- |. +++. ..+++++|+|.||++++.++....+.
T Consensus 119 ~~~~~~~~~-~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~ 197 (388)
T PLN02511 119 RHMLLRARS-KGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGEN 197 (388)
T ss_pred HHHHHHHHH-CCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCC
Confidence 345555555 499999999996433221 11 2222 25899999999999999888665432
Q ss_pred CCCCCccceEEEeccccC
Q 037206 70 DLNGIKLSGIYLVQPYFG 87 (149)
Q Consensus 70 ~~~~~~~~~~~l~~P~~~ 87 (149)
..+.+.+++++.++
T Consensus 198 ----~~v~~~v~is~p~~ 211 (388)
T PLN02511 198 ----CPLSGAVSLCNPFD 211 (388)
T ss_pred ----CCceEEEEECCCcC
Confidence 23677777776544
No 58
>PRK00870 haloalkane dehalogenase; Provisional
Probab=97.73 E-value=0.00021 Score=53.37 Aligned_cols=72 Identities=14% Similarity=0.070 Sum_probs=49.4
Q ss_pred chhhHHHHHHHHhhCCCEEEEEccCCCCCCC-------c--cc--cchh-------cccEEEeecChhhHHHHHHHHHhc
Q 037206 6 CSTYHNYVGSHSAKANVIVVSVDYRLAPEHL-------L--GK--TLVL-------ILLVFLRGNSAGGNIVHSMAFQAS 67 (149)
Q Consensus 6 ~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~-------~--p~--~~~~-------~~~i~l~G~SAGg~La~~~~~~~~ 67 (149)
...++.++..|+++ |+.|+.+|.|-.-... | .. +++. .+++.++|+|.||.+++.++....
T Consensus 59 ~~~w~~~~~~L~~~-gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p 137 (302)
T PRK00870 59 SYLYRKMIPILAAA-GHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHP 137 (302)
T ss_pred hhhHHHHHHHHHhC-CCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhCh
Confidence 34566777778765 9999999998533221 1 11 2222 578999999999999999987543
Q ss_pred cCCCCCCccceEEEecc
Q 037206 68 FDDLNGIKLSGIYLVQP 84 (149)
Q Consensus 68 ~~~~~~~~~~~~~l~~P 84 (149)
+ .+++++++.|
T Consensus 138 ~------~v~~lvl~~~ 148 (302)
T PRK00870 138 D------RFARLVVANT 148 (302)
T ss_pred h------heeEEEEeCC
Confidence 2 3666666664
No 59
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=97.73 E-value=0.00016 Score=51.70 Aligned_cols=70 Identities=19% Similarity=0.190 Sum_probs=45.1
Q ss_pred hhHHHHHHHHhhCCCEEEEEccCCCCCCCc--c---c---------cchh---cccEEEeecChhhHHHHHHHHHhccCC
Q 037206 8 TYHNYVGSHSAKANVIVVSVDYRLAPEHLL--G---K---------TLVL---ILLVFLRGNSAGGNIVHSMAFQASFDD 70 (149)
Q Consensus 8 ~~~~~~~~la~~~g~~v~~vdYrlaPe~~~--p---~---------~~~~---~~~i~l~G~SAGg~La~~~~~~~~~~~ 70 (149)
.+......+. + ++.|+.+|+|-.-...- + . +++. ..+++++|+|.||.+++.++....+
T Consensus 28 ~~~~~~~~l~-~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~-- 103 (257)
T TIGR03611 28 YWAPQLDVLT-Q-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIERFHFVGHALGGLIGLQLALRYPE-- 103 (257)
T ss_pred HHHHHHHHHH-h-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCCcEEEEEechhHHHHHHHHHHChH--
Confidence 3334454554 3 79999999984322111 1 1 2222 7889999999999999999865332
Q ss_pred CCCCccceEEEeccc
Q 037206 71 LNGIKLSGIYLVQPY 85 (149)
Q Consensus 71 ~~~~~~~~~~l~~P~ 85 (149)
.++++++++++
T Consensus 104 ----~v~~~i~~~~~ 114 (257)
T TIGR03611 104 ----RLLSLVLINAW 114 (257)
T ss_pred ----HhHHheeecCC
Confidence 36666666654
No 60
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=97.72 E-value=0.00031 Score=50.97 Aligned_cols=75 Identities=15% Similarity=0.128 Sum_probs=49.0
Q ss_pred CchhhHHHHHHHHhhCCCEEEEEccCCCCCCCcc-------c--cc---h----h---cccEEEeecChhhHHHHHHHHH
Q 037206 5 FCSTYHNYVGSHSAKANVIVVSVDYRLAPEHLLG-------K--TL---V----L---ILLVFLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 5 ~~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p-------~--~~---~----~---~~~i~l~G~SAGg~La~~~~~~ 65 (149)
+...+......+.++.|+.|+.+|+|-.-....| . .+ + . .++++++|+|.||.+++.++..
T Consensus 37 ~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~ 116 (288)
T TIGR01250 37 MSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALK 116 (288)
T ss_pred ccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHh
Confidence 3344555555555556999999999853222211 1 11 1 1 5779999999999999999875
Q ss_pred hccCCCCCCccceEEEeccc
Q 037206 66 ASFDDLNGIKLSGIYLVQPY 85 (149)
Q Consensus 66 ~~~~~~~~~~~~~~~l~~P~ 85 (149)
..+ .++++++..|.
T Consensus 117 ~p~------~v~~lvl~~~~ 130 (288)
T TIGR01250 117 YGQ------HLKGLIISSML 130 (288)
T ss_pred Ccc------ccceeeEeccc
Confidence 432 36777776653
No 61
>PLN02965 Probable pheophorbidase
Probab=97.71 E-value=0.00022 Score=52.01 Aligned_cols=72 Identities=21% Similarity=0.121 Sum_probs=48.2
Q ss_pred chhhHHHHHHHHhhCCCEEEEEccCCCCCCCcc--------c--cchh-------c-ccEEEeecChhhHHHHHHHHHhc
Q 037206 6 CSTYHNYVGSHSAKANVIVVSVDYRLAPEHLLG--------K--TLVL-------I-LLVFLRGNSAGGNIVHSMAFQAS 67 (149)
Q Consensus 6 ~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p--------~--~~~~-------~-~~i~l~G~SAGg~La~~~~~~~~ 67 (149)
...++.....|++. ++.|+.+|+|-.-+...| + +++. . .+++++|+|.||.+++.++....
T Consensus 16 ~~~w~~~~~~L~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ia~~~a~~~p 94 (255)
T PLN02965 16 AWCWYKLATLLDAA-GFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGGSVTEALCKFT 94 (255)
T ss_pred cCcHHHHHHHHhhC-CceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchHHHHHHHHhCc
Confidence 34566677778765 899999999864333221 1 2222 3 49999999999999999987543
Q ss_pred cCCCCCCccceEEEecc
Q 037206 68 FDDLNGIKLSGIYLVQP 84 (149)
Q Consensus 68 ~~~~~~~~~~~~~l~~P 84 (149)
+ .+++++++++
T Consensus 95 ~------~v~~lvl~~~ 105 (255)
T PLN02965 95 D------KISMAIYVAA 105 (255)
T ss_pred h------heeEEEEEcc
Confidence 2 2555555543
No 62
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=97.68 E-value=0.00024 Score=55.70 Aligned_cols=71 Identities=15% Similarity=0.149 Sum_probs=48.1
Q ss_pred hhhHHHHHHHHhhCCCEEEEEccCCCCCCCccc------------------cchh---cccEEEeecChhhHHHHHHHHH
Q 037206 7 STYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK------------------TLVL---ILLVFLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 7 ~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~------------------~~~~---~~~i~l~G~SAGg~La~~~~~~ 65 (149)
..+...+..|++ ++.|+.+|+|-.-...-|. .|+. .++++++|+|.||.+++.++..
T Consensus 119 ~~~~~~~~~L~~--~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~ 196 (402)
T PLN02894 119 GFFFRNFDALAS--RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALK 196 (402)
T ss_pred hHHHHHHHHHHh--CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHh
Confidence 344556677765 5999999999543221111 2222 5689999999999999999876
Q ss_pred hccCCCCCCccceEEEeccc
Q 037206 66 ASFDDLNGIKLSGIYLVQPY 85 (149)
Q Consensus 66 ~~~~~~~~~~~~~~~l~~P~ 85 (149)
..+ .+++++++.|+
T Consensus 197 ~p~------~v~~lvl~~p~ 210 (402)
T PLN02894 197 HPE------HVQHLILVGPA 210 (402)
T ss_pred Cch------hhcEEEEECCc
Confidence 433 36777777664
No 63
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.66 E-value=0.0012 Score=50.41 Aligned_cols=67 Identities=18% Similarity=0.175 Sum_probs=48.0
Q ss_pred HHHHhhCCCEEEEEccCC-----CCCCCccc------------cchh---cccEEEeecChhhHHHHHHHHHhccCCCCC
Q 037206 14 GSHSAKANVIVVSVDYRL-----APEHLLGK------------TLVL---ILLVFLRGNSAGGNIVHSMAFQASFDDLNG 73 (149)
Q Consensus 14 ~~la~~~g~~v~~vdYrl-----aPe~~~p~------------~~~~---~~~i~l~G~SAGg~La~~~~~~~~~~~~~~ 73 (149)
..|++ .-.|.++|-.- .|..+... +|-. .++++|+|||.||.|+...++...+.
T Consensus 111 ~~La~--~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPer---- 184 (365)
T KOG4409|consen 111 DDLAK--IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPER---- 184 (365)
T ss_pred hhhhh--cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHh----
Confidence 44555 56788888642 23333322 4444 88999999999999999999876654
Q ss_pred CccceEEEeccccCC
Q 037206 74 IKLSGIYLVQPYFGR 88 (149)
Q Consensus 74 ~~~~~~~l~~P~~~~ 88 (149)
+.-+||.+||--.
T Consensus 185 --V~kLiLvsP~Gf~ 197 (365)
T KOG4409|consen 185 --VEKLILVSPWGFP 197 (365)
T ss_pred --hceEEEecccccc
Confidence 8889999998443
No 64
>PRK03592 haloalkane dehalogenase; Provisional
Probab=97.65 E-value=0.0003 Score=52.34 Aligned_cols=72 Identities=13% Similarity=0.057 Sum_probs=50.7
Q ss_pred chhhHHHHHHHHhhCCCEEEEEccCCCCCCCccc-------------cchh---cccEEEeecChhhHHHHHHHHHhccC
Q 037206 6 CSTYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK-------------TLVL---ILLVFLRGNSAGGNIVHSMAFQASFD 69 (149)
Q Consensus 6 ~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~-------------~~~~---~~~i~l~G~SAGg~La~~~~~~~~~~ 69 (149)
...++.++..|+++ + .|+.+|.|=.-+.+.|. .++. .+++.++|+|.||.+++.++....+
T Consensus 40 ~~~w~~~~~~L~~~-~-~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~- 116 (295)
T PRK03592 40 SYLWRNIIPHLAGL-G-RCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPD- 116 (295)
T ss_pred HHHHHHHHHHHhhC-C-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChh-
Confidence 34556778888776 4 99999998433222221 2222 6899999999999999999876543
Q ss_pred CCCCCccceEEEeccc
Q 037206 70 DLNGIKLSGIYLVQPY 85 (149)
Q Consensus 70 ~~~~~~~~~~~l~~P~ 85 (149)
.++++++++|.
T Consensus 117 -----~v~~lil~~~~ 127 (295)
T PRK03592 117 -----RVRGIAFMEAI 127 (295)
T ss_pred -----heeEEEEECCC
Confidence 47888887763
No 65
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=97.65 E-value=0.00028 Score=51.42 Aligned_cols=72 Identities=14% Similarity=0.059 Sum_probs=48.0
Q ss_pred CchhhHHHHHHHHhhCCCEEEEEccCCCCCCCccc--------------cchh---cccEEEeecChhhHHHHHHHHHhc
Q 037206 5 FCSTYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK--------------TLVL---ILLVFLRGNSAGGNIVHSMAFQAS 67 (149)
Q Consensus 5 ~~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~--------------~~~~---~~~i~l~G~SAGg~La~~~~~~~~ 67 (149)
....++.++..|++ ++.|+.+|+|-..+..-|. ..+. .++++++|+|.||.+++.++....
T Consensus 40 ~~~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 117 (278)
T TIGR03056 40 STHSWRDLMPPLAR--SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGP 117 (278)
T ss_pred CHHHHHHHHHHHhh--CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCC
Confidence 44567777888865 5999999999543322111 1111 568999999999999999886543
Q ss_pred cCCCCCCccceEEEecc
Q 037206 68 FDDLNGIKLSGIYLVQP 84 (149)
Q Consensus 68 ~~~~~~~~~~~~~l~~P 84 (149)
+ .+++++++.+
T Consensus 118 ~------~v~~~v~~~~ 128 (278)
T TIGR03056 118 V------TPRMVVGINA 128 (278)
T ss_pred c------ccceEEEEcC
Confidence 2 3555665554
No 66
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=97.63 E-value=0.00027 Score=52.09 Aligned_cols=71 Identities=13% Similarity=0.081 Sum_probs=47.0
Q ss_pred hhhHHHHHHHHhhCCCEEEEEccCCCCCCCcc-------c------cchh---cccEEEeecChhhHHHHHHHHHhccCC
Q 037206 7 STYHNYVGSHSAKANVIVVSVDYRLAPEHLLG-------K------TLVL---ILLVFLRGNSAGGNIVHSMAFQASFDD 70 (149)
Q Consensus 7 ~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p-------~------~~~~---~~~i~l~G~SAGg~La~~~~~~~~~~~ 70 (149)
..+..++..|.+ ++.|+.+|+|=.-+..-| . .++. .+++.|+|+|.||.+++.++....+
T Consensus 39 ~~w~~~~~~L~~--~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~-- 114 (276)
T TIGR02240 39 ELVFPFIEALDP--DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPE-- 114 (276)
T ss_pred HHHHHHHHHhcc--CceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHH--
Confidence 344566777754 589999999844332222 1 2222 6789999999999999999975433
Q ss_pred CCCCccceEEEeccc
Q 037206 71 LNGIKLSGIYLVQPY 85 (149)
Q Consensus 71 ~~~~~~~~~~l~~P~ 85 (149)
.++++++++|.
T Consensus 115 ----~v~~lvl~~~~ 125 (276)
T TIGR02240 115 ----RCKKLILAATA 125 (276)
T ss_pred ----HhhheEEeccC
Confidence 25555555543
No 67
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=97.62 E-value=0.0002 Score=55.29 Aligned_cols=56 Identities=16% Similarity=0.028 Sum_probs=38.6
Q ss_pred hHHHHHHHHhhCCCEEEEEccCCC-----CCCCcc-------c------------------------cchh------ccc
Q 037206 9 YHNYVGSHSAKANVIVVSVDYRLA-----PEHLLG-------K------------------------TLVL------ILL 46 (149)
Q Consensus 9 ~~~~~~~la~~~g~~v~~vdYrla-----Pe~~~p-------~------------------------~~~~------~~~ 46 (149)
...++..||++ |++|++||=.-. +|.... + .|+. ++|
T Consensus 149 ~~~~g~~LAk~-GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~R 227 (390)
T PF12715_consen 149 KQDYGDQLAKR-GYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDR 227 (390)
T ss_dssp TT-HHHHHHTT-TSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEE
T ss_pred cccHHHHHHhC-CCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccc
Confidence 34578999987 999999997542 221111 1 2222 999
Q ss_pred EEEeecChhhHHHHHHHHH
Q 037206 47 VFLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 47 i~l~G~SAGg~La~~~~~~ 65 (149)
|+++|+|.||..++.++..
T Consensus 228 IG~~GfSmGg~~a~~LaAL 246 (390)
T PF12715_consen 228 IGCMGFSMGGYRAWWLAAL 246 (390)
T ss_dssp EEEEEEGGGHHHHHHHHHH
T ss_pred eEEEeecccHHHHHHHHHc
Confidence 9999999999999888753
No 68
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=97.58 E-value=0.00015 Score=51.32 Aligned_cols=57 Identities=19% Similarity=0.140 Sum_probs=39.1
Q ss_pred hhHHHHHHHHhhCCCEEEEEccCCCCCCCccc-------------cchh---cccEEEeecChhhHHHHHHHHHh
Q 037206 8 TYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK-------------TLVL---ILLVFLRGNSAGGNIVHSMAFQA 66 (149)
Q Consensus 8 ~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~-------------~~~~---~~~i~l~G~SAGg~La~~~~~~~ 66 (149)
.+..+...+. + |+.|+.+|+|---+...+. .++. .++++++|+|.||.+++.++...
T Consensus 28 ~~~~~~~~l~-~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~ 100 (251)
T TIGR02427 28 MWDPVLPALT-P-DFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAARR 100 (251)
T ss_pred hHHHHHHHhh-c-ccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceEEEEeCchHHHHHHHHHHC
Confidence 4456666664 3 8999999998542221111 1121 67899999999999999888653
No 69
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=97.57 E-value=0.00033 Score=51.44 Aligned_cols=66 Identities=21% Similarity=0.189 Sum_probs=45.0
Q ss_pred HHHHHHhhCCCEEEEEccCCCCCCCccc--------------cchh---cccEEEeecChhhHHHHHHHHHhccCCCCCC
Q 037206 12 YVGSHSAKANVIVVSVDYRLAPEHLLGK--------------TLVL---ILLVFLRGNSAGGNIVHSMAFQASFDDLNGI 74 (149)
Q Consensus 12 ~~~~la~~~g~~v~~vdYrlaPe~~~p~--------------~~~~---~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~ 74 (149)
....++++ |+.|+.+|+|-.-+...+. ..+. .++++++|+|.||.+++.++....+
T Consensus 52 ~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~------ 124 (282)
T TIGR03343 52 NIGPFVDA-GYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPD------ 124 (282)
T ss_pred HHHHHHhC-CCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChH------
Confidence 34556554 8999999998543332211 1111 7799999999999999999875433
Q ss_pred ccceEEEecc
Q 037206 75 KLSGIYLVQP 84 (149)
Q Consensus 75 ~~~~~~l~~P 84 (149)
.+++++++.|
T Consensus 125 ~v~~lvl~~~ 134 (282)
T TIGR03343 125 RIGKLILMGP 134 (282)
T ss_pred hhceEEEECC
Confidence 3666676655
No 70
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=97.53 E-value=0.00059 Score=54.04 Aligned_cols=68 Identities=18% Similarity=0.160 Sum_probs=47.2
Q ss_pred HHHHHHhh-CCCEEEEEccCCCCCCCccc----------------cchh------cccEEEeecChhhHHHHHHHHHhcc
Q 037206 12 YVGSHSAK-ANVIVVSVDYRLAPEHLLGK----------------TLVL------ILLVFLRGNSAGGNIVHSMAFQASF 68 (149)
Q Consensus 12 ~~~~la~~-~g~~v~~vdYrlaPe~~~p~----------------~~~~------~~~i~l~G~SAGg~La~~~~~~~~~ 68 (149)
++..+..+ ..+.|+.+|++-.-...||. +++. .+++.++|+|.|||+|..++.....
T Consensus 63 l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~ 142 (442)
T TIGR03230 63 LVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKH 142 (442)
T ss_pred HHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCc
Confidence 44444332 26999999998554455553 2221 5899999999999999998864332
Q ss_pred CCCCCCccceEEEeccc
Q 037206 69 DDLNGIKLSGIYLVQPY 85 (149)
Q Consensus 69 ~~~~~~~~~~~~l~~P~ 85 (149)
++..++++-|.
T Consensus 143 ------rV~rItgLDPA 153 (442)
T TIGR03230 143 ------KVNRITGLDPA 153 (442)
T ss_pred ------ceeEEEEEcCC
Confidence 47778887774
No 71
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=97.51 E-value=0.00049 Score=48.63 Aligned_cols=71 Identities=14% Similarity=0.010 Sum_probs=46.8
Q ss_pred chhhHHHHHHHHhhCCCEEEEEccCCCCCCCccc-----cc---hh---cccEEEeecChhhHHHHHHHHHhccCCCCCC
Q 037206 6 CSTYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK-----TL---VL---ILLVFLRGNSAGGNIVHSMAFQASFDDLNGI 74 (149)
Q Consensus 6 ~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~-----~~---~~---~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~ 74 (149)
...+..+...+++ ++.|+.+|+|=.-...-+. .+ +. .++++++|+|.||.+++.++....+
T Consensus 17 ~~~~~~~~~~l~~--~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~------ 88 (245)
T TIGR01738 17 AEVFRCLDEELSA--HFTLHLVDLPGHGRSRGFGPLSLADAAEAIAAQAPDPAIWLGWSLGGLVALHIAATHPD------ 88 (245)
T ss_pred hhhHHHHHHhhcc--CeEEEEecCCcCccCCCCCCcCHHHHHHHHHHhCCCCeEEEEEcHHHHHHHHHHHHCHH------
Confidence 3455666666753 6999999998532221111 22 22 6799999999999999998865433
Q ss_pred ccceEEEecc
Q 037206 75 KLSGIYLVQP 84 (149)
Q Consensus 75 ~~~~~~l~~P 84 (149)
.+++++++.+
T Consensus 89 ~v~~~il~~~ 98 (245)
T TIGR01738 89 RVRALVTVAS 98 (245)
T ss_pred hhheeeEecC
Confidence 2566666554
No 72
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.51 E-value=0.00024 Score=52.26 Aligned_cols=76 Identities=21% Similarity=0.318 Sum_probs=54.8
Q ss_pred chhhHHHHHHHHhhCCCEEEEEcc-CCCCCCCccc--------cchh--------------cccEEEeecChhhHHHHHH
Q 037206 6 CSTYHNYVGSHSAKANVIVVSVDY-RLAPEHLLGK--------TLVL--------------ILLVFLRGNSAGGNIVHSM 62 (149)
Q Consensus 6 ~~~~~~~~~~la~~~g~~v~~vdY-rlaPe~~~p~--------~~~~--------------~~~i~l~G~SAGg~La~~~ 62 (149)
...|..+.+++|+. |++|+.++- .+.|-..... .|+. .++++++|||-||..|.++
T Consensus 59 ns~Ys~lL~HIASH-GfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAl 137 (307)
T PF07224_consen 59 NSFYSQLLAHIASH-GFIVVAPQLYTLFPPDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFAL 137 (307)
T ss_pred hHHHHHHHHHHhhc-CeEEEechhhcccCCCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHH
Confidence 46789999999986 999999985 4444222211 6665 7899999999999999999
Q ss_pred HHHhccCCCCCCccceEEEecccc
Q 037206 63 AFQASFDDLNGIKLSGIYLVQPYF 86 (149)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~l~~P~~ 86 (149)
++... . ..++.++|.+-|+-
T Consensus 138 ALg~a-~---~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 138 ALGYA-T---SLKFSALIGIDPVA 157 (307)
T ss_pred Hhccc-c---cCchhheecccccC
Confidence 87543 1 23456666666553
No 73
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.49 E-value=0.0026 Score=48.55 Aligned_cols=64 Identities=22% Similarity=0.129 Sum_probs=45.3
Q ss_pred CchhhHHHHHHHHhhCCCEEEEEccCC----CCCCC---ccc-cchh----------cccEEEeecChhhHHHHHHHHHh
Q 037206 5 FCSTYHNYVGSHSAKANVIVVSVDYRL----APEHL---LGK-TLVL----------ILLVFLRGNSAGGNIVHSMAFQA 66 (149)
Q Consensus 5 ~~~~~~~~~~~la~~~g~~v~~vdYrl----aPe~~---~p~-~~~~----------~~~i~l~G~SAGg~La~~~~~~~ 66 (149)
+..++++....+.+..|+.|+.+|-.= .+..+ |-. .|+. .+++.++|+|.||.+|..+|...
T Consensus 70 ~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~ 149 (326)
T KOG1454|consen 70 SSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYY 149 (326)
T ss_pred CcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhC
Confidence 556677778888888789999998753 22111 222 2222 66699999999999999999875
Q ss_pred cc
Q 037206 67 SF 68 (149)
Q Consensus 67 ~~ 68 (149)
.+
T Consensus 150 P~ 151 (326)
T KOG1454|consen 150 PE 151 (326)
T ss_pred cc
Confidence 44
No 74
>PLN02578 hydrolase
Probab=97.49 E-value=0.00076 Score=51.83 Aligned_cols=70 Identities=19% Similarity=0.086 Sum_probs=48.1
Q ss_pred hhhHHHHHHHHhhCCCEEEEEccCCCCCCC-----ccc--------cchh---cccEEEeecChhhHHHHHHHHHhccCC
Q 037206 7 STYHNYVGSHSAKANVIVVSVDYRLAPEHL-----LGK--------TLVL---ILLVFLRGNSAGGNIVHSMAFQASFDD 70 (149)
Q Consensus 7 ~~~~~~~~~la~~~g~~v~~vdYrlaPe~~-----~p~--------~~~~---~~~i~l~G~SAGg~La~~~~~~~~~~~ 70 (149)
..+......|++ ++.|+.+|+|=..... |.. .++. .++++++|+|.||.+++.++....+
T Consensus 100 ~~w~~~~~~l~~--~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~-- 175 (354)
T PLN02578 100 FHWRYNIPELAK--KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPE-- 175 (354)
T ss_pred HHHHHHHHHHhc--CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChH--
Confidence 334455666754 6999999999543222 221 2222 6789999999999999999986543
Q ss_pred CCCCccceEEEecc
Q 037206 71 LNGIKLSGIYLVQP 84 (149)
Q Consensus 71 ~~~~~~~~~~l~~P 84 (149)
.+++++++.|
T Consensus 176 ----~v~~lvLv~~ 185 (354)
T PLN02578 176 ----LVAGVALLNS 185 (354)
T ss_pred ----hcceEEEECC
Confidence 3677777664
No 75
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.48 E-value=0.00074 Score=50.08 Aligned_cols=73 Identities=18% Similarity=0.098 Sum_probs=49.3
Q ss_pred chhhHHHHHHHHhhCCCEEEEEccCCCCCC--------Cccc------cchh----cccEEEeecChhhHHHHHHHHHhc
Q 037206 6 CSTYHNYVGSHSAKANVIVVSVDYRLAPEH--------LLGK------TLVL----ILLVFLRGNSAGGNIVHSMAFQAS 67 (149)
Q Consensus 6 ~~~~~~~~~~la~~~g~~v~~vdYrlaPe~--------~~p~------~~~~----~~~i~l~G~SAGg~La~~~~~~~~ 67 (149)
...++.+...|.++ |+.|+.+|+|-.-+. .+.. .++. .++++++|+|.||.++..++....
T Consensus 31 ~~~w~~~~~~L~~~-g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p 109 (273)
T PLN02211 31 SWCWYKIRCLMENS-GYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFP 109 (273)
T ss_pred cCcHHHHHHHHHhC-CCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhCh
Confidence 34567778888765 999999999863211 1111 2222 379999999999999998886432
Q ss_pred cCCCCCCccceEEEeccc
Q 037206 68 FDDLNGIKLSGIYLVQPY 85 (149)
Q Consensus 68 ~~~~~~~~~~~~~l~~P~ 85 (149)
+ .+++++++.+.
T Consensus 110 ~------~v~~lv~~~~~ 121 (273)
T PLN02211 110 K------KICLAVYVAAT 121 (273)
T ss_pred h------heeEEEEeccc
Confidence 2 36677766553
No 76
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.47 E-value=0.00074 Score=48.45 Aligned_cols=72 Identities=19% Similarity=0.127 Sum_probs=49.1
Q ss_pred chhhHHHHHHHHhhCCCEEEEEccCCCCCCCccc--------cchh-------cccEEEeecChhhHHHHHHHHHhccCC
Q 037206 6 CSTYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK--------TLVL-------ILLVFLRGNSAGGNIVHSMAFQASFDD 70 (149)
Q Consensus 6 ~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~--------~~~~-------~~~i~l~G~SAGg~La~~~~~~~~~~~ 70 (149)
...++.+...+ + ++.|+.+|+|-.-...-|. +++. .++++++|+|.||.+++.++......
T Consensus 15 ~~~w~~~~~~l--~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~~~~~- 90 (242)
T PRK11126 15 GQDWQPVGEAL--P-DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQSYNILPYWLVGYSLGGRIAMYYACQGLAG- 90 (242)
T ss_pred hHHHHHHHHHc--C-CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCCcc-
Confidence 34566677766 3 6999999999543222222 2322 68999999999999999998764321
Q ss_pred CCCCccceEEEeccc
Q 037206 71 LNGIKLSGIYLVQPY 85 (149)
Q Consensus 71 ~~~~~~~~~~l~~P~ 85 (149)
.++++++..|.
T Consensus 91 ----~v~~lvl~~~~ 101 (242)
T PRK11126 91 ----GLCGLIVEGGN 101 (242)
T ss_pred ----cccEEEEeCCC
Confidence 36777776544
No 77
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=97.45 E-value=0.0014 Score=45.53 Aligned_cols=72 Identities=19% Similarity=0.017 Sum_probs=43.7
Q ss_pred CCCchhhHHHHHHHHhhCCCEEEEEccCCCCCCCccc--cchh---------cccEEEeecChhhHHHHHHHHHhccCCC
Q 037206 3 SPFCSTYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK--TLVL---------ILLVFLRGNSAGGNIVHSMAFQASFDDL 71 (149)
Q Consensus 3 s~~~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~--~~~~---------~~~i~l~G~SAGg~La~~~~~~~~~~~~ 71 (149)
|+..--+..+.+.+... ..|-.++. ..|. .|+. .++++++|||.|...++..+. ..
T Consensus 10 s~~~HW~~wl~~~l~~~--~~V~~~~~------~~P~~~~W~~~l~~~i~~~~~~~ilVaHSLGc~~~l~~l~--~~--- 76 (171)
T PF06821_consen 10 SPPDHWQPWLERQLENS--VRVEQPDW------DNPDLDEWVQALDQAIDAIDEPTILVAHSLGCLTALRWLA--EQ--- 76 (171)
T ss_dssp STTTSTHHHHHHHHTTS--EEEEEC--------TS--HHHHHHHHHHCCHC-TTTEEEEEETHHHHHHHHHHH--HT---
T ss_pred CCccHHHHHHHHhCCCC--eEEecccc------CCCCHHHHHHHHHHHHhhcCCCeEEEEeCHHHHHHHHHHh--hc---
Confidence 44434444455555443 44444333 4444 6765 677999999999998888875 11
Q ss_pred CCCccceEEEeccccC
Q 037206 72 NGIKLSGIYLVQPYFG 87 (149)
Q Consensus 72 ~~~~~~~~~l~~P~~~ 87 (149)
...+++|++|++|+-.
T Consensus 77 ~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 77 SQKKVAGALLVAPFDP 92 (171)
T ss_dssp CCSSEEEEEEES--SC
T ss_pred ccccccEEEEEcCCCc
Confidence 1346999999999854
No 78
>PRK10349 carboxylesterase BioH; Provisional
Probab=97.42 E-value=0.0012 Score=48.04 Aligned_cols=70 Identities=16% Similarity=0.049 Sum_probs=47.8
Q ss_pred hhhHHHHHHHHhhCCCEEEEEccCCCCCCCccc--------cchh---cccEEEeecChhhHHHHHHHHHhccCCCCCCc
Q 037206 7 STYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK--------TLVL---ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIK 75 (149)
Q Consensus 7 ~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~--------~~~~---~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~ 75 (149)
..++.+...|.+ .+.|+.+|+|-.-....+. +.+. .+++.++|+|.||.+++.++....+ .
T Consensus 27 ~~w~~~~~~L~~--~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~l~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~------~ 98 (256)
T PRK10349 27 EVWRCIDEELSS--HFTLHLVDLPGFGRSRGFGALSLADMAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPE------R 98 (256)
T ss_pred hHHHHHHHHHhc--CCEEEEecCCCCCCCCCCCCCCHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHhChH------h
Confidence 344556666754 5999999999543222222 2222 8899999999999999999865332 4
Q ss_pred cceEEEecc
Q 037206 76 LSGIYLVQP 84 (149)
Q Consensus 76 ~~~~~l~~P 84 (149)
+++++++.|
T Consensus 99 v~~lili~~ 107 (256)
T PRK10349 99 VQALVTVAS 107 (256)
T ss_pred hheEEEecC
Confidence 677777655
No 79
>PRK03204 haloalkane dehalogenase; Provisional
Probab=97.42 E-value=0.0011 Score=49.43 Aligned_cols=71 Identities=15% Similarity=0.177 Sum_probs=47.9
Q ss_pred hhhHHHHHHHHhhCCCEEEEEccCCCCCCCccc----------cch---h----cccEEEeecChhhHHHHHHHHHhccC
Q 037206 7 STYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK----------TLV---L----ILLVFLRGNSAGGNIVHSMAFQASFD 69 (149)
Q Consensus 7 ~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~----------~~~---~----~~~i~l~G~SAGg~La~~~~~~~~~~ 69 (149)
..++.+...|.+ ++.|+.+|+|---....|. +.+ . .+++.++|+|.||.+++.++....+
T Consensus 48 ~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~- 124 (286)
T PRK03204 48 FLYRDIIVALRD--RFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERAD- 124 (286)
T ss_pred HHHHHHHHHHhC--CcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChh-
Confidence 345566777754 5999999999643322221 111 1 5789999999999999988865433
Q ss_pred CCCCCccceEEEeccc
Q 037206 70 DLNGIKLSGIYLVQPY 85 (149)
Q Consensus 70 ~~~~~~~~~~~l~~P~ 85 (149)
++++++++.|.
T Consensus 125 -----~v~~lvl~~~~ 135 (286)
T PRK03204 125 -----RVRGVVLGNTW 135 (286)
T ss_pred -----heeEEEEECcc
Confidence 37777776654
No 80
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.41 E-value=0.00011 Score=59.49 Aligned_cols=48 Identities=31% Similarity=0.373 Sum_probs=37.0
Q ss_pred HhhCCCEEEEEccCCCCCCC-------ccc-----------cchh---------cccEEEeecChhhHHHHHHHH
Q 037206 17 SAKANVIVVSVDYRLAPEHL-------LGK-----------TLVL---------ILLVFLRGNSAGGNIVHSMAF 64 (149)
Q Consensus 17 a~~~g~~v~~vdYrlaPe~~-------~p~-----------~~~~---------~~~i~l~G~SAGg~La~~~~~ 64 (149)
.....++||.++|||.+=.- -|. +|++ |++|.++|+||||.++..++.
T Consensus 140 ~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~ 214 (545)
T KOG1516|consen 140 LLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTL 214 (545)
T ss_pred cccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhc
Confidence 34448999999999964321 122 7777 999999999999999877765
No 81
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.39 E-value=0.00085 Score=54.42 Aligned_cols=81 Identities=10% Similarity=0.065 Sum_probs=53.5
Q ss_pred hHHHHHHHHhhCCCEEEEEccCCCCCC--C--ccc----------cchh----cccEEEeecChhhHHHHHHHHHhccCC
Q 037206 9 YHNYVGSHSAKANVIVVSVDYRLAPEH--L--LGK----------TLVL----ILLVFLRGNSAGGNIVHSMAFQASFDD 70 (149)
Q Consensus 9 ~~~~~~~la~~~g~~v~~vdYrlaPe~--~--~p~----------~~~~----~~~i~l~G~SAGg~La~~~~~~~~~~~ 70 (149)
...+++.|+++ |+.|+.+|+|-.-.. . +.. +.+. .+++.++|+|.||.++++++.......
T Consensus 209 ~~Slv~~L~~q-Gf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~ 287 (532)
T TIGR01838 209 QNSLVRWLVEQ-GHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARG 287 (532)
T ss_pred chHHHHHHHHC-CcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhC
Confidence 46789999987 999999999853211 1 111 1221 678999999999999765332211111
Q ss_pred CCCCccceEEEeccccCCCCC
Q 037206 71 LNGIKLSGIYLVQPYFGRNYG 91 (149)
Q Consensus 71 ~~~~~~~~~~l~~P~~~~~~~ 91 (149)
.+.++++++++...+|.+..
T Consensus 288 -~~~rv~slvll~t~~Df~~~ 307 (532)
T TIGR01838 288 -DDKRIKSATFFTTLLDFSDP 307 (532)
T ss_pred -CCCccceEEEEecCcCCCCc
Confidence 02358888988888887643
No 82
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=97.36 E-value=0.00073 Score=52.84 Aligned_cols=74 Identities=15% Similarity=0.108 Sum_probs=45.8
Q ss_pred hhHHHHHH-HHhhCCCEEEEEccCCC---CCCCccc----------cchh------cccEEEeecChhhHHHHHHHHHhc
Q 037206 8 TYHNYVGS-HSAKANVIVVSVDYRLA---PEHLLGK----------TLVL------ILLVFLRGNSAGGNIVHSMAFQAS 67 (149)
Q Consensus 8 ~~~~~~~~-la~~~g~~v~~vdYrla---Pe~~~p~----------~~~~------~~~i~l~G~SAGg~La~~~~~~~~ 67 (149)
++..+.+. ++. .|+.++.+|-+-. |..++.. +|+. .+||+++|.|.||++|..++...
T Consensus 205 D~~~l~~~~l~~-rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le- 282 (411)
T PF06500_consen 205 DLYRLFRDYLAP-RGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALE- 282 (411)
T ss_dssp GGHHHHHCCCHH-CT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHh-CCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhc-
Confidence 34444444 555 5999999998754 3333322 4443 88999999999999999887543
Q ss_pred cCCCCCCccceEEEeccccCC
Q 037206 68 FDDLNGIKLSGIYLVQPYFGR 88 (149)
Q Consensus 68 ~~~~~~~~~~~~~l~~P~~~~ 88 (149)
..++++++...|.+..
T Consensus 283 -----~~RlkavV~~Ga~vh~ 298 (411)
T PF06500_consen 283 -----DPRLKAVVALGAPVHH 298 (411)
T ss_dssp -----TTT-SEEEEES---SC
T ss_pred -----ccceeeEeeeCchHhh
Confidence 2459999999997553
No 83
>PRK04940 hypothetical protein; Provisional
Probab=97.34 E-value=0.00053 Score=47.85 Aligned_cols=85 Identities=18% Similarity=0.219 Sum_probs=54.1
Q ss_pred ccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCCCCCC------c-------------------hHHHH-
Q 037206 45 LLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGRNYGV------V-------------------DNCWV- 98 (149)
Q Consensus 45 ~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~~~------~-------------------~~~~~- 98 (149)
+++.++|.|.||..|..++....-+ .+++.|.+.+...- + +.+|-
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~---------aVLiNPAv~P~~~L~~~ig~~~~y~~~~~~h~~eL~~~~p~r~~vl 130 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIR---------QVIFNPNLFPEENMEGKIDRPEEYADIATKCVTNFREKNRDRCLVI 130 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCC---------EEEECCCCChHHHHHHHhCCCcchhhhhHHHHHHhhhcCcccEEEE
Confidence 5799999999999999998765432 36677765543210 0 00010
Q ss_pred --------HHHHHhcC-CCceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhc
Q 037206 99 --------IYFENCGW-AGETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNR 145 (149)
Q Consensus 99 --------~~~~~l~~-~~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~ 145 (149)
.|.+..+. .+..+..+.+|+.|+|..+ .+.+..|.+|+.+
T Consensus 131 lq~gDEvLDyr~a~~~y~~~y~~~v~~GGdH~f~~f-------e~~l~~I~~F~~~ 179 (180)
T PRK04940 131 LSRNDEVLDSQRTAEELHPYYEIVWDEEQTHKFKNI-------SPHLQRIKAFKTL 179 (180)
T ss_pred EeCCCcccCHHHHHHHhccCceEEEECCCCCCCCCH-------HHHHHHHHHHHhc
Confidence 33333322 1223688999999999665 3578888888753
No 84
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.34 E-value=0.00068 Score=50.38 Aligned_cols=59 Identities=19% Similarity=0.256 Sum_probs=46.4
Q ss_pred hhHHHHHHHHhhCCCEEEEEccCCCCCCCccc--------------cchh------cccEEEeecChhhHHHHHHHHHh
Q 037206 8 TYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK--------------TLVL------ILLVFLRGNSAGGNIVHSMAFQA 66 (149)
Q Consensus 8 ~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~--------------~~~~------~~~i~l~G~SAGg~La~~~~~~~ 66 (149)
++-.++..+.....+.|+.+|-|---|.+... ..+. +.+|+++|||.||.+|...+...
T Consensus 89 SfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k 167 (343)
T KOG2564|consen 89 SFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASK 167 (343)
T ss_pred hHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhh
Confidence 45568899999999999999999766666644 1111 88999999999999998777543
No 85
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=97.33 E-value=0.0028 Score=47.92 Aligned_cols=26 Identities=23% Similarity=0.354 Sum_probs=22.5
Q ss_pred CCchhhHHHHHHHHhhCCCEEEEEccC
Q 037206 4 PFCSTYHNYVGSHSAKANVIVVSVDYR 30 (149)
Q Consensus 4 ~~~~~~~~~~~~la~~~g~~v~~vdYr 30 (149)
|+...|..+|..||+. |++|.+++.|
T Consensus 129 gsRt~YSa~c~~LASh-G~VVaavEHR 154 (399)
T KOG3847|consen 129 GSRTLYSAYCTSLASH-GFVVAAVEHR 154 (399)
T ss_pred cchhhHHHHhhhHhhC-ceEEEEeecc
Confidence 3456789999999997 9999999987
No 86
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.25 E-value=0.00087 Score=52.74 Aligned_cols=75 Identities=12% Similarity=-0.001 Sum_probs=52.0
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCCCC-----------------C--Cc----------h
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGRNY-----------------G--VV----------D 94 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~-----------------~--~~----------~ 94 (149)
+++.+|+|.|.||..|+.+++...+ .+.+++.+||.+-... . .+ +
T Consensus 287 ~~~~~IaG~S~GGl~AL~~al~~Pd------~Fg~v~s~Sgs~ww~~~~~~~~~~l~~~l~~~~~~~~~lr~~i~~G~~E 360 (411)
T PRK10439 287 ADRTVVAGQSFGGLAALYAGLHWPE------RFGCVLSQSGSFWWPHRGGQQEGVLLEQLKAGEVSARGLRIVLEAGRRE 360 (411)
T ss_pred ccceEEEEEChHHHHHHHHHHhCcc------cccEEEEeccceecCCccCCchhHHHHHHHhcccCCCCceEEEeCCCCC
Confidence 7889999999999999999876554 3777888887642110 0 00 1
Q ss_pred -HHHH---HHHHHhcCCC-ceEEEEeCCCCeeeeee
Q 037206 95 -NCWV---IYFENCGWAG-ETEIVETQGEDHVFYLF 125 (149)
Q Consensus 95 -~~~~---~~~~~l~~~~-~v~~~~~~g~~H~f~~~ 125 (149)
.+.. .+.+.|++.+ ++++.+++| .|.+..+
T Consensus 361 ~~~~~~~~~l~~~L~~~G~~~~~~~~~G-GHd~~~W 395 (411)
T PRK10439 361 PMIMRANQALYAQLHPAGHSVFWRQVDG-GHDALCW 395 (411)
T ss_pred chHHHHHHHHHHHHHHCCCcEEEEECCC-CcCHHHH
Confidence 1111 6777777544 999999998 5987655
No 87
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.25 E-value=0.00087 Score=47.53 Aligned_cols=87 Identities=18% Similarity=0.195 Sum_probs=55.8
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCC-CCCCc------------------hH----HHH-H
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGR-NYGVV------------------DN----CWV-I 99 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~-~~~~~------------------~~----~~~-~ 99 (149)
++||++.|.|.||.+++..+..+.. .+.|+...++++.. ....+ |+ .|. .
T Consensus 92 ~~rI~igGfs~G~a~aL~~~~~~~~------~l~G~~~~s~~~p~~~~~~~~~~~~~~~~~i~~~Hg~~d~~vp~~~g~~ 165 (206)
T KOG2112|consen 92 SNRIGIGGFSQGGALALYSALTYPK------ALGGIFALSGFLPRASIGLPGWLPGVNYTPILLCHGTADPLVPFRFGEK 165 (206)
T ss_pred ccceeEcccCchHHHHHHHHhcccc------ccceeeccccccccchhhccCCccccCcchhheecccCCceeehHHHHH
Confidence 8999999999999999999987732 24555555554431 10000 11 122 3
Q ss_pred HHHHhcC-CCceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhc
Q 037206 100 YFENCGW-AGETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNR 145 (149)
Q Consensus 100 ~~~~l~~-~~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~ 145 (149)
..+.++. +.+++++.|+|+.|.- ..+-++++..|+++
T Consensus 166 s~~~l~~~~~~~~f~~y~g~~h~~---------~~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 166 SAQFLKSLGVRVTFKPYPGLGHST---------SPQELDDLKSWIKT 203 (206)
T ss_pred HHHHHHHcCCceeeeecCCccccc---------cHHHHHHHHHHHHH
Confidence 4445554 4589999999999933 12566777777765
No 88
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.25 E-value=0.00045 Score=51.63 Aligned_cols=77 Identities=13% Similarity=-0.028 Sum_probs=56.0
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCCCCCCc-----hHH----H-----------------
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGRNYGVV-----DNC----W----------------- 97 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~~~~-----~~~----~----------------- 97 (149)
.++-+|+|+|-||..++..++...+. +..++..||.++...... ... +
T Consensus 176 a~~r~L~G~SlGG~vsL~agl~~Pe~------FG~V~s~Sps~~~~~~~~~~~~~~~~~l~~~~a~~~~~~~~l~~g~~~ 249 (299)
T COG2382 176 ADGRVLAGDSLGGLVSLYAGLRHPER------FGHVLSQSGSFWWTPLDTQPQGEVAESLKILHAIGTDERIVLTTGGEE 249 (299)
T ss_pred CCCcEEeccccccHHHHHHHhcCchh------hceeeccCCccccCccccccccchhhhhhhhhccCccceEEeecCCcc
Confidence 78889999999999999998766543 677778888776543221 000 0
Q ss_pred -------HHHHHHhcCCC-ceEEEEeCCCCeeeeeecC
Q 037206 98 -------VIYFENCGWAG-ETEIVETQGEDHVFYLFNL 127 (149)
Q Consensus 98 -------~~~~~~l~~~~-~v~~~~~~g~~H~f~~~~~ 127 (149)
+.+++.|++.+ +..+.+|+| +|.+..+.+
T Consensus 250 ~~~~~pNr~L~~~L~~~g~~~~yre~~G-gHdw~~Wr~ 286 (299)
T COG2382 250 GDFLRPNRALAAQLEKKGIPYYYREYPG-GHDWAWWRP 286 (299)
T ss_pred ccccchhHHHHHHHHhcCCcceeeecCC-CCchhHhHH
Confidence 07778777554 999999999 998866543
No 89
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.24 E-value=0.0015 Score=49.00 Aligned_cols=81 Identities=21% Similarity=0.073 Sum_probs=54.5
Q ss_pred chhhHHHHHHHHhhCCCEEEEEccCCCCCCCccc---------cchh-------------cccEEEeecChhhHHHHHHH
Q 037206 6 CSTYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK---------TLVL-------------ILLVFLRGNSAGGNIVHSMA 63 (149)
Q Consensus 6 ~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~---------~~~~-------------~~~i~l~G~SAGg~La~~~~ 63 (149)
......+...+.++ |++|+.+|| .-+..+|-. .-++ ..+|+++|.|-||+-++..+
T Consensus 12 ~~~e~~~l~~~L~~-GyaVv~pDY-~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA 89 (290)
T PF03583_consen 12 TEYEAPFLAAWLAR-GYAVVAPDY-EGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAA 89 (290)
T ss_pred hHhHHHHHHHHHHC-CCEEEecCC-CCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHH
Confidence 34445566777766 999999999 355557744 1111 36899999999999887766
Q ss_pred HHhccCCCCCCc--cceEEEeccccCCC
Q 037206 64 FQASFDDLNGIK--LSGIYLVQPYFGRN 89 (149)
Q Consensus 64 ~~~~~~~~~~~~--~~~~~l~~P~~~~~ 89 (149)
...... -++.. +.|.+...|..|+.
T Consensus 90 ~l~~~Y-ApeL~~~l~Gaa~gg~~~dl~ 116 (290)
T PF03583_consen 90 ELAPSY-APELNRDLVGAAAGGPPADLA 116 (290)
T ss_pred HHhHHh-CcccccceeEEeccCCccCHH
Confidence 443322 23455 88888888876643
No 90
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=97.23 E-value=0.00053 Score=49.28 Aligned_cols=72 Identities=18% Similarity=0.202 Sum_probs=49.6
Q ss_pred HHHHHHHhhCCCEEEEEccCCCCCCC-ccc------------cchh------cccEEEeecChhhHHHHHHHHHhccCCC
Q 037206 11 NYVGSHSAKANVIVVSVDYRLAPEHL-LGK------------TLVL------ILLVFLRGNSAGGNIVHSMAFQASFDDL 71 (149)
Q Consensus 11 ~~~~~la~~~g~~v~~vdYrlaPe~~-~p~------------~~~~------~~~i~l~G~SAGg~La~~~~~~~~~~~~ 71 (149)
..++-+-...++.|+.++||-.-... -|. .|+. ..+|++.|.|-||..|..++..-.+
T Consensus 96 ~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~--- 172 (300)
T KOG4391|consen 96 PIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD--- 172 (300)
T ss_pred hHHHHHHHHcCceEEEEEeeccccCCCCccccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchh---
Confidence 34566777889999999999643221 122 4444 8899999999999988888754433
Q ss_pred CCCccceEEEeccccCC
Q 037206 72 NGIKLSGIYLVQPYFGR 88 (149)
Q Consensus 72 ~~~~~~~~~l~~P~~~~ 88 (149)
++.++|+-..++..
T Consensus 173 ---ri~~~ivENTF~SI 186 (300)
T KOG4391|consen 173 ---RISAIIVENTFLSI 186 (300)
T ss_pred ---heeeeeeechhccc
Confidence 36666665555444
No 91
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=97.21 E-value=0.0059 Score=42.02 Aligned_cols=136 Identities=15% Similarity=0.190 Sum_probs=80.6
Q ss_pred CCCCchhhHHHHHHHHhhCCCEEEEEccCC--C-CCC-Cccc--------cchh----------cccEEEeecChhhHHH
Q 037206 2 GSPFCSTYHNYVGSHSAKANVIVVSVDYRL--A-PEH-LLGK--------TLVL----------ILLVFLRGNSAGGNIV 59 (149)
Q Consensus 2 ~s~~~~~~~~~~~~la~~~g~~v~~vdYrl--a-Pe~-~~p~--------~~~~----------~~~i~l~G~SAGg~La 59 (149)
+|..+......|..++.+ |+.|+-.++.- + |+. +-|. .|+. ...+++.|.|.||-.+
T Consensus 25 asmdSt~m~~~a~~la~~-G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi~GGkSmGGR~a 103 (213)
T COG3571 25 ASMDSTSMTAVAAALARR-GWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLIIGGKSMGGRVA 103 (213)
T ss_pred CCCCCHHHHHHHHHHHhC-ceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCceeeccccccchHH
Confidence 355567778889999987 99887766532 1 222 1121 5554 5579999999999999
Q ss_pred HHHHHHhccCCCCCCccceEEEe-ccccCCCCCCc--------------------hHHHHHHHHHhcC--CCceEEEEeC
Q 037206 60 HSMAFQASFDDLNGIKLSGIYLV-QPYFGRNYGVV--------------------DNCWVIYFENCGW--AGETEIVETQ 116 (149)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~l~-~P~~~~~~~~~--------------------~~~~~~~~~~l~~--~~~v~~~~~~ 116 (149)
.+++.....+ |.+++++ ||+.-...... |.+ ....+-... ..++|++..+
T Consensus 104 Smvade~~A~------i~~L~clgYPfhppGKPe~~Rt~HL~gl~tPtli~qGtrD~f-Gtr~~Va~y~ls~~iev~wl~ 176 (213)
T COG3571 104 SMVADELQAP------IDGLVCLGYPFHPPGKPEQLRTEHLTGLKTPTLITQGTRDEF-GTRDEVAGYALSDPIEVVWLE 176 (213)
T ss_pred HHHHHhhcCC------cceEEEecCccCCCCCcccchhhhccCCCCCeEEeecccccc-cCHHHHHhhhcCCceEEEEec
Confidence 9998665442 7777654 56644332211 110 011121121 2389999999
Q ss_pred CCCeeeeeecC---C--chhHHHHHHHHHHHHhc
Q 037206 117 GEDHVFYLFNL---D--SEEAVPLMDKLASFLNR 145 (149)
Q Consensus 117 g~~H~f~~~~~---~--~~~~~~~~~~i~~fl~~ 145 (149)
+..|+.-.... . ...-+..-+++..|.++
T Consensus 177 ~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 177 DADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred cCccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 99997633221 1 11223455667777654
No 92
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=97.21 E-value=0.0021 Score=49.52 Aligned_cols=71 Identities=17% Similarity=0.139 Sum_probs=45.9
Q ss_pred hhhHHHHHHHHhhCCCEEEEEccCCCCCC------Cc--cc------cchh---cccEEEeecChhhHHHHHHHHHhccC
Q 037206 7 STYHNYVGSHSAKANVIVVSVDYRLAPEH------LL--GK------TLVL---ILLVFLRGNSAGGNIVHSMAFQASFD 69 (149)
Q Consensus 7 ~~~~~~~~~la~~~g~~v~~vdYrlaPe~------~~--p~------~~~~---~~~i~l~G~SAGg~La~~~~~~~~~~ 69 (149)
..+..+...|++ ++.|+.+|+|=--+. .| .. .++. .++++++|+|.||.+++.++....
T Consensus 102 ~~w~~~~~~L~~--~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~-- 177 (360)
T PLN02679 102 PHWRRNIGVLAK--NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASEST-- 177 (360)
T ss_pred HHHHHHHHHHhc--CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcC--
Confidence 445566777754 799999999943222 22 11 2222 789999999999999887764321
Q ss_pred CCCCCccceEEEecc
Q 037206 70 DLNGIKLSGIYLVQP 84 (149)
Q Consensus 70 ~~~~~~~~~~~l~~P 84 (149)
+.++++++++.|
T Consensus 178 ---P~rV~~LVLi~~ 189 (360)
T PLN02679 178 ---RDLVRGLVLLNC 189 (360)
T ss_pred ---hhhcCEEEEECC
Confidence 123677777765
No 93
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=97.17 E-value=0.013 Score=49.76 Aligned_cols=54 Identities=15% Similarity=-0.024 Sum_probs=40.3
Q ss_pred HHHHHHHhhCCCEEEEEccCCCC--CCC---c-cc---------cchh--------------------cccEEEeecChh
Q 037206 11 NYVGSHSAKANVIVVSVDYRLAP--EHL---L-GK---------TLVL--------------------ILLVFLRGNSAG 55 (149)
Q Consensus 11 ~~~~~la~~~g~~v~~vdYrlaP--e~~---~-p~---------~~~~--------------------~~~i~l~G~SAG 55 (149)
.+...++.+ |++|+.+|.|=.- +.. + +. .|+. ..||+++|.|.|
T Consensus 270 ~~~~~~~~r-GYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 270 SLNDYFLPR-GFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred hHHHHHHhC-CeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 456778776 9999999999642 221 1 21 7775 479999999999
Q ss_pred hHHHHHHHHH
Q 037206 56 GNIVHSMAFQ 65 (149)
Q Consensus 56 g~La~~~~~~ 65 (149)
|.++..++..
T Consensus 349 G~~~~~aAa~ 358 (767)
T PRK05371 349 GTLPNAVATT 358 (767)
T ss_pred HHHHHHHHhh
Confidence 9999988753
No 94
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=97.14 E-value=0.0013 Score=53.48 Aligned_cols=70 Identities=17% Similarity=-0.100 Sum_probs=48.6
Q ss_pred HHHHHHhhCCCEEEEEccCCCCC--CC---c-cc---------cchh-----cccEEEeecChhhHHHHHHHHHhccCCC
Q 037206 12 YVGSHSAKANVIVVSVDYRLAPE--HL---L-GK---------TLVL-----ILLVFLRGNSAGGNIVHSMAFQASFDDL 71 (149)
Q Consensus 12 ~~~~la~~~g~~v~~vdYrlaPe--~~---~-p~---------~~~~-----~~~i~l~G~SAGg~La~~~~~~~~~~~~ 71 (149)
.+..++++ |+.|+.+|+|=.-+ .. + +. +|+. ..+|+++|+|.||.+++.++...
T Consensus 45 ~~~~l~~~-Gy~vv~~D~RG~g~S~g~~~~~~~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~----- 118 (550)
T TIGR00976 45 EPAWFVAQ-GYAVVIQDTRGRGASEGEFDLLGSDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQ----- 118 (550)
T ss_pred cHHHHHhC-CcEEEEEeccccccCCCceEecCcccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccC-----
Confidence 45667776 99999999995321 11 1 22 5664 46999999999999988887542
Q ss_pred CCCccceEEEeccccCC
Q 037206 72 NGIKLSGIYLVQPYFGR 88 (149)
Q Consensus 72 ~~~~~~~~~l~~P~~~~ 88 (149)
.+.++++++.+++.+.
T Consensus 119 -~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 119 -PPALRAIAPQEGVWDL 134 (550)
T ss_pred -CCceeEEeecCcccch
Confidence 2347777777766543
No 95
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=97.13 E-value=0.016 Score=43.21 Aligned_cols=76 Identities=20% Similarity=0.241 Sum_probs=51.1
Q ss_pred CCCCchhhHHHHHHHHhhCCCEEEEEccCCCCCC-Cccc---------cchh--------cccEEEeecChhhHHHHHHH
Q 037206 2 GSPFCSTYHNYVGSHSAKANVIVVSVDYRLAPEH-LLGK---------TLVL--------ILLVFLRGNSAGGNIVHSMA 63 (149)
Q Consensus 2 ~s~~~~~~~~~~~~la~~~g~~v~~vdYrlaPe~-~~p~---------~~~~--------~~~i~l~G~SAGg~La~~~~ 63 (149)
|||.+--.-.+.+..-.+.|++++.++|+---.. .+|. .|+. .++++.+|||-|+--|++++
T Consensus 43 GsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la 122 (297)
T PF06342_consen 43 GSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLA 122 (297)
T ss_pred CCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHH
Confidence 4444433333444444566999999999854222 2222 4443 89999999999999999998
Q ss_pred HHhccCCCCCCccceEEEeccc
Q 037206 64 FQASFDDLNGIKLSGIYLVQPY 85 (149)
Q Consensus 64 ~~~~~~~~~~~~~~~~~l~~P~ 85 (149)
... +..|+++++|.
T Consensus 123 ~~~--------~~~g~~lin~~ 136 (297)
T PF06342_consen 123 VTH--------PLHGLVLINPP 136 (297)
T ss_pred hcC--------ccceEEEecCC
Confidence 654 24688888875
No 96
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=97.12 E-value=0.0045 Score=48.35 Aligned_cols=81 Identities=16% Similarity=0.146 Sum_probs=56.0
Q ss_pred CCCchhhHHHHHHHHhhCCCEEEEEccCCCCCCCc--cc--------------cchh----cccEEEeecChhhHHHHHH
Q 037206 3 SPFCSTYHNYVGSHSAKANVIVVSVDYRLAPEHLL--GK--------------TLVL----ILLVFLRGNSAGGNIVHSM 62 (149)
Q Consensus 3 s~~~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~--p~--------------~~~~----~~~i~l~G~SAGg~La~~~ 62 (149)
.++.+.|-+-....|.+.|+.|+..+-|=....+. |. ++++ ..+++.+|.|.||+|....
T Consensus 136 g~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nY 215 (409)
T KOG1838|consen 136 GGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNY 215 (409)
T ss_pred CCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHH
Confidence 34555666656666677899999999997554433 22 3444 5569999999999987777
Q ss_pred HHHhccCCCCCCccceEEEecccc
Q 037206 63 AFQASFDDLNGIKLSGIYLVQPYF 86 (149)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~l~~P~~ 86 (149)
.....+. .+...|+.+.+||-
T Consensus 216 LGE~g~~---~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 216 LGEEGDN---TPLIAAVAVCNPWD 236 (409)
T ss_pred hhhccCC---CCceeEEEEeccch
Confidence 6655543 34567777778874
No 97
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=97.11 E-value=0.0022 Score=46.35 Aligned_cols=66 Identities=18% Similarity=0.219 Sum_probs=44.9
Q ss_pred HHHHhhCCCEEEEEccCCC--CCCCc---cc----------------cchh------cccEEEeecChhhHHHHHHHHHh
Q 037206 14 GSHSAKANVIVVSVDYRLA--PEHLL---GK----------------TLVL------ILLVFLRGNSAGGNIVHSMAFQA 66 (149)
Q Consensus 14 ~~la~~~g~~v~~vdYrla--Pe~~~---p~----------------~~~~------~~~i~l~G~SAGg~La~~~~~~~ 66 (149)
..+|.+.|++|+-++=... +...+ +. +++. ++||++.|.|+||.++..++...
T Consensus 39 ~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~ 118 (220)
T PF10503_consen 39 NALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAY 118 (220)
T ss_pred HHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhC
Confidence 4688889999998874321 12111 10 2222 99999999999999999888765
Q ss_pred ccCCCCCCccceEEEeccc
Q 037206 67 SFDDLNGIKLSGIYLVQPY 85 (149)
Q Consensus 67 ~~~~~~~~~~~~~~l~~P~ 85 (149)
.+ .+.++..+++.
T Consensus 119 pd------~faa~a~~sG~ 131 (220)
T PF10503_consen 119 PD------LFAAVAVVSGV 131 (220)
T ss_pred Cc------cceEEEeeccc
Confidence 44 36676666654
No 98
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=97.10 E-value=0.0054 Score=45.49 Aligned_cols=84 Identities=13% Similarity=0.207 Sum_probs=61.0
Q ss_pred chhhHHHHHHHHhh--CCCEEEEEccC---CCCCCCc----cc------------cchh---------cccEEEeecChh
Q 037206 6 CSTYHNYVGSHSAK--ANVIVVSVDYR---LAPEHLL----GK------------TLVL---------ILLVFLRGNSAG 55 (149)
Q Consensus 6 ~~~~~~~~~~la~~--~g~~v~~vdYr---laPe~~~----p~------------~~~~---------~~~i~l~G~SAG 55 (149)
.+.|..++..|.+. ..+.|+.+.+. ..|..+. .. +++. ..+++++|||.|
T Consensus 15 v~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIG 94 (266)
T PF10230_consen 15 VEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIG 94 (266)
T ss_pred HHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHH
Confidence 56788899999977 48899999886 3444311 11 2222 367999999999
Q ss_pred hHHHHHHHHHhccCCCCCCccceEEEeccccCCCCCC
Q 037206 56 GNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGRNYGV 92 (149)
Q Consensus 56 g~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~~~ 92 (149)
+++++.++.+.... ..++..++++.|.+..-...
T Consensus 95 ayi~levl~r~~~~---~~~V~~~~lLfPTi~~ia~S 128 (266)
T PF10230_consen 95 AYIALEVLKRLPDL---KFRVKKVILLFPTIEDIAKS 128 (266)
T ss_pred HHHHHHHHHhcccc---CCceeEEEEeCCccccccCC
Confidence 99999999887722 35689999999987554333
No 99
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=97.10 E-value=0.0016 Score=48.86 Aligned_cols=68 Identities=15% Similarity=0.060 Sum_probs=43.9
Q ss_pred HHHHHHHhhCCCEEEEEccCCCCCCCccc-----------cchh-------cccEEEeecChhhHHHHHHHHHhccCCCC
Q 037206 11 NYVGSHSAKANVIVVSVDYRLAPEHLLGK-----------TLVL-------ILLVFLRGNSAGGNIVHSMAFQASFDDLN 72 (149)
Q Consensus 11 ~~~~~la~~~g~~v~~vdYrlaPe~~~p~-----------~~~~-------~~~i~l~G~SAGg~La~~~~~~~~~~~~~ 72 (149)
.+...+.. .++.|+.+|+|-.-...-+. +.+. .++++++|+|.||.+++.++....+
T Consensus 44 ~~~~~~~~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~---- 118 (306)
T TIGR01249 44 GCRRFFDP-ETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPE---- 118 (306)
T ss_pred HHHhccCc-cCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChH----
Confidence 34444433 38999999998642222111 1111 5789999999999999999876533
Q ss_pred CCccceEEEeccc
Q 037206 73 GIKLSGIYLVQPY 85 (149)
Q Consensus 73 ~~~~~~~~l~~P~ 85 (149)
.++++++..++
T Consensus 119 --~v~~lvl~~~~ 129 (306)
T TIGR01249 119 --VVTGLVLRGIF 129 (306)
T ss_pred --hhhhheeeccc
Confidence 35666666544
No 100
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.02 E-value=0.003 Score=51.37 Aligned_cols=80 Identities=14% Similarity=0.093 Sum_probs=56.0
Q ss_pred hHHHHHHHHhhCCCEEEEEccCCCCCCCccc----cchh--------------cccEEEeecChhhHHHHHHHHHhccCC
Q 037206 9 YHNYVGSHSAKANVIVVSVDYRLAPEHLLGK----TLVL--------------ILLVFLRGNSAGGNIVHSMAFQASFDD 70 (149)
Q Consensus 9 ~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~----~~~~--------------~~~i~l~G~SAGg~La~~~~~~~~~~~ 70 (149)
...+.+.+.++ |+.|+.||+|-. ....-. .|+. ..+|.++|.|.||.|+++++......+
T Consensus 236 ~~SlVr~lv~q-G~~VflIsW~nP-~~~~r~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~ 313 (560)
T TIGR01839 236 EKSFVQYCLKN-QLQVFIISWRNP-DKAHREWGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALG 313 (560)
T ss_pred cchHHHHHHHc-CCeEEEEeCCCC-ChhhcCCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcC
Confidence 46788999887 999999999963 222111 3332 788999999999999997533332221
Q ss_pred CCCCccceEEEeccccCCCCC
Q 037206 71 LNGIKLSGIYLVQPYFGRNYG 91 (149)
Q Consensus 71 ~~~~~~~~~~l~~P~~~~~~~ 91 (149)
++.+++.++++...+|....
T Consensus 314 -~~~~V~sltllatplDf~~~ 333 (560)
T TIGR01839 314 -QLRKVNSLTYLVSLLDSTME 333 (560)
T ss_pred -CCCceeeEEeeecccccCCC
Confidence 12368999988888887653
No 101
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.01 E-value=0.005 Score=46.10 Aligned_cols=55 Identities=16% Similarity=0.199 Sum_probs=38.2
Q ss_pred HHHHhhCCCEEEEE-ccCCC--CCCCc----cc---------cchh-------------cccEEEeecChhhHHHHHHHH
Q 037206 14 GSHSAKANVIVVSV-DYRLA--PEHLL----GK---------TLVL-------------ILLVFLRGNSAGGNIVHSMAF 64 (149)
Q Consensus 14 ~~la~~~g~~v~~v-dYrla--Pe~~~----p~---------~~~~-------------~~~i~l~G~SAGg~La~~~~~ 64 (149)
..+|.+.|+.|+-+ .|... +...+ |+ .|+. ++||++.|-|+||.|+..++.
T Consensus 84 d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac 163 (312)
T COG3509 84 DALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLAC 163 (312)
T ss_pred hhhhcccCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHh
Confidence 67888889999988 45432 22111 22 2322 999999999999999999886
Q ss_pred Hhcc
Q 037206 65 QASF 68 (149)
Q Consensus 65 ~~~~ 68 (149)
...+
T Consensus 164 ~~p~ 167 (312)
T COG3509 164 EYPD 167 (312)
T ss_pred cCcc
Confidence 5433
No 102
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=96.97 E-value=0.0038 Score=47.68 Aligned_cols=76 Identities=13% Similarity=0.188 Sum_probs=49.8
Q ss_pred HHHHHHHHhhCCCEEEEEccCCC---CCC--------Cccc------cchh-------------------------c--c
Q 037206 10 HNYVGSHSAKANVIVVSVDYRLA---PEH--------LLGK------TLVL-------------------------I--L 45 (149)
Q Consensus 10 ~~~~~~la~~~g~~v~~vdYrla---Pe~--------~~p~------~~~~-------------------------~--~ 45 (149)
..++..|+++ |+.|+.+|.|=- +.. .|.. .++. + .
T Consensus 64 ~~~~~~l~~~-G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (332)
T TIGR01607 64 DSWIENFNKN-GYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRL 142 (332)
T ss_pred HHHHHHHHHC-CCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCC
Confidence 5788999887 999999999842 211 1111 1111 1 2
Q ss_pred cEEEeecChhhHHHHHHHHHhccCC--CCCCccceEEEecccc
Q 037206 46 LVFLRGNSAGGNIVHSMAFQASFDD--LNGIKLSGIYLVQPYF 86 (149)
Q Consensus 46 ~i~l~G~SAGg~La~~~~~~~~~~~--~~~~~~~~~~l~~P~~ 86 (149)
.++++|||.||.+++.++....... .....++|+|+++|.+
T Consensus 143 p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~ 185 (332)
T TIGR01607 143 PMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMI 185 (332)
T ss_pred ceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccce
Confidence 4899999999999998876543321 0112578888888764
No 103
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=96.92 E-value=0.0035 Score=44.10 Aligned_cols=58 Identities=22% Similarity=0.193 Sum_probs=42.6
Q ss_pred CEEEEEccCCCCCCC------ccc----------cchh----cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEE
Q 037206 22 VIVVSVDYRLAPEHL------LGK----------TLVL----ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYL 81 (149)
Q Consensus 22 ~~v~~vdYrlaPe~~------~p~----------~~~~----~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l 81 (149)
+.|+.+|-|=..... ++. ..+. .+++.++|+|.||.+++.++....+ .++++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~------~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPE------RVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGG------GEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCch------hhcCcEE
Confidence 468888888665544 222 1111 6679999999999999999977655 4899999
Q ss_pred eccc
Q 037206 82 VQPY 85 (149)
Q Consensus 82 ~~P~ 85 (149)
+.+.
T Consensus 75 ~~~~ 78 (230)
T PF00561_consen 75 ISPP 78 (230)
T ss_dssp ESES
T ss_pred Eeee
Confidence 9985
No 104
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=96.90 E-value=0.00046 Score=54.74 Aligned_cols=54 Identities=35% Similarity=0.338 Sum_probs=38.2
Q ss_pred CCCCchhhHHHHHHHHhhCCCEEEEEccCCCCC----------CCccc---------cchh---------cccEEEeecC
Q 037206 2 GSPFCSTYHNYVGSHSAKANVIVVSVDYRLAPE----------HLLGK---------TLVL---------ILLVFLRGNS 53 (149)
Q Consensus 2 ~s~~~~~~~~~~~~la~~~g~~v~~vdYrlaPe----------~~~p~---------~~~~---------~~~i~l~G~S 53 (149)
|+++-+-|+ ++.||..-+++||+++||+.|- .|=-- +|++ |++|.|.|+|
T Consensus 149 Gt~SLdvYd--Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aFGGnp~~vTLFGES 226 (601)
T KOG4389|consen 149 GTPSLDVYD--GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLALQWVQENIAAFGGNPSRVTLFGES 226 (601)
T ss_pred CCcceeeec--cceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHHHHHHHHhHHHhCCCcceEEEeccc
Confidence 344444444 3556776689999999998642 11111 8887 9999999999
Q ss_pred hhhH
Q 037206 54 AGGN 57 (149)
Q Consensus 54 AGg~ 57 (149)
||+.
T Consensus 227 AGaA 230 (601)
T KOG4389|consen 227 AGAA 230 (601)
T ss_pred cchh
Confidence 9984
No 105
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=96.80 E-value=0.01 Score=47.70 Aligned_cols=66 Identities=15% Similarity=0.143 Sum_probs=43.8
Q ss_pred HHHHh--hCCCEEEEEccCCCCCCC------ccc----cch----h----cccEEEeecChhhHHHHHHHHHhccCCCCC
Q 037206 14 GSHSA--KANVIVVSVDYRLAPEHL------LGK----TLV----L----ILLVFLRGNSAGGNIVHSMAFQASFDDLNG 73 (149)
Q Consensus 14 ~~la~--~~g~~v~~vdYrlaPe~~------~p~----~~~----~----~~~i~l~G~SAGg~La~~~~~~~~~~~~~~ 73 (149)
..+++ +.++.|+.+|+|---+.+ |.- +.+ . .+++.++|+|.||.+++.++....+
T Consensus 223 ~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe----- 297 (481)
T PLN03087 223 PNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPG----- 297 (481)
T ss_pred HHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChH-----
Confidence 44442 248999999998632211 111 111 1 6899999999999999999876433
Q ss_pred CccceEEEeccc
Q 037206 74 IKLSGIYLVQPY 85 (149)
Q Consensus 74 ~~~~~~~l~~P~ 85 (149)
.+++++++.|.
T Consensus 298 -~V~~LVLi~~~ 308 (481)
T PLN03087 298 -AVKSLTLLAPP 308 (481)
T ss_pred -hccEEEEECCC
Confidence 36777777653
No 106
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=96.80 E-value=0.0035 Score=47.90 Aligned_cols=59 Identities=15% Similarity=0.104 Sum_probs=39.9
Q ss_pred CCEEEEEccCCC---CCCCccc--------cchh---ccc-EEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccc
Q 037206 21 NVIVVSVDYRLA---PEHLLGK--------TLVL---ILL-VFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPY 85 (149)
Q Consensus 21 g~~v~~vdYrla---Pe~~~p~--------~~~~---~~~-i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~ 85 (149)
++.|+.+|+|=. +..++.. .++. .++ +.++|+|.||.+++.++.+..+ ++++++++.+.
T Consensus 99 ~~~Vi~~Dl~G~g~s~~~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~------~V~~LvLi~s~ 172 (343)
T PRK08775 99 RFRLLAFDFIGADGSLDVPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPA------RVRTLVVVSGA 172 (343)
T ss_pred ccEEEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChH------hhheEEEECcc
Confidence 799999999943 2222211 2222 445 4799999999999999986543 36777777653
No 107
>KOG3101 consensus Esterase D [General function prediction only]
Probab=96.73 E-value=0.0021 Score=46.07 Aligned_cols=22 Identities=27% Similarity=0.301 Sum_probs=18.1
Q ss_pred cccEEEeecChhhHHHHHHHHH
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~ 65 (149)
+.++.+.|||+|||=|+...++
T Consensus 140 ~~k~~IfGHSMGGhGAl~~~Lk 161 (283)
T KOG3101|consen 140 PLKVGIFGHSMGGHGALTIYLK 161 (283)
T ss_pred chhcceeccccCCCceEEEEEc
Confidence 7889999999999977665543
No 108
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=96.63 E-value=0.0036 Score=47.91 Aligned_cols=82 Identities=15% Similarity=0.142 Sum_probs=50.5
Q ss_pred chhhHHHHHHHHhh--CCCEEEEEccCCCCCCCccc----------------cchh------cccEEEeecChhhHHHHH
Q 037206 6 CSTYHNYVGSHSAK--ANVIVVSVDYRLAPEHLLGK----------------TLVL------ILLVFLRGNSAGGNIVHS 61 (149)
Q Consensus 6 ~~~~~~~~~~la~~--~g~~v~~vdYrlaPe~~~p~----------------~~~~------~~~i~l~G~SAGg~La~~ 61 (149)
......+...+.++ .++.|+.|||...-...|+. .++. +++|-++|||-|||+|..
T Consensus 87 ~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~ 166 (331)
T PF00151_consen 87 ESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGF 166 (331)
T ss_dssp TTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHH
T ss_pred hhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhh
Confidence 44555666666555 58999999998654445655 1221 999999999999999999
Q ss_pred HHHHhccCCCCCCccceEEEeccccCC
Q 037206 62 MAFQASFDDLNGIKLSGIYLVQPYFGR 88 (149)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~l~~P~~~~ 88 (149)
++..... +..-.+|.|+=.-.|.+..
T Consensus 167 aG~~~~~-~~ki~rItgLDPAgP~F~~ 192 (331)
T PF00151_consen 167 AGKYLKG-GGKIGRITGLDPAGPLFEN 192 (331)
T ss_dssp HHHHTTT----SSEEEEES-B-TTTTT
T ss_pred hhhhccC-cceeeEEEecCcccccccC
Confidence 9988776 1111234444334444443
No 109
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.61 E-value=0.033 Score=41.00 Aligned_cols=79 Identities=13% Similarity=0.170 Sum_probs=51.8
Q ss_pred CCchhhHHHHHHHHhhCCC-----EEEEEccCCCCCCCccc-------------------cchh-----cccEEEeecCh
Q 037206 4 PFCSTYHNYVGSHSAKANV-----IVVSVDYRLAPEHLLGK-------------------TLVL-----ILLVFLRGNSA 54 (149)
Q Consensus 4 ~~~~~~~~~~~~la~~~g~-----~v~~vdYrlaPe~~~p~-------------------~~~~-----~~~i~l~G~SA 54 (149)
|....|..+++++-+.++- ++-..+--+.|...-.+ .++. ..+|+++|||-
T Consensus 40 G~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSi 119 (301)
T KOG3975|consen 40 GLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSI 119 (301)
T ss_pred CchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhCCCCCEEEEEecch
Confidence 3467788899999888772 34445666666221111 3333 78999999999
Q ss_pred hhHHHHHHHHHhccCCCCCCccceEEEecccc
Q 037206 55 GGNIVHSMAFQASFDDLNGIKLSGIYLVQPYF 86 (149)
Q Consensus 55 Gg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~ 86 (149)
|+.+.+.++...+. ...+..++++.|.+
T Consensus 120 GaYm~Lqil~~~k~----~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 120 GAYMVLQILPSIKL----VFSVQKAVLLFPTI 147 (301)
T ss_pred hHHHHHHHhhhccc----ccceEEEEEecchH
Confidence 99999999865332 23455566666644
No 110
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=96.57 E-value=0.0034 Score=44.21 Aligned_cols=81 Identities=16% Similarity=0.066 Sum_probs=55.6
Q ss_pred CCCCchh-hHHHHHHHHhhCCCEEEEEccCCC-CCCCccc-----------cchh---cccEEEeecChhhHHHHHHHHH
Q 037206 2 GSPFCST-YHNYVGSHSAKANVIVVSVDYRLA-PEHLLGK-----------TLVL---ILLVFLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 2 ~s~~~~~-~~~~~~~la~~~g~~v~~vdYrla-Pe~~~p~-----------~~~~---~~~i~l~G~SAGg~La~~~~~~ 65 (149)
|++.+.. ...++..|+++ |+.|+.+|=... =..+-|+ .|.. .++++|.|-|-|+-+.-.+..+
T Consensus 10 GDgGw~~~d~~~a~~l~~~-G~~VvGvdsl~Yfw~~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nr 88 (192)
T PF06057_consen 10 GDGGWRDLDKQIAEALAKQ-GVPVVGVDSLRYFWSERTPEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNR 88 (192)
T ss_pred CCCCchhhhHHHHHHHHHC-CCeEEEechHHHHhhhCCHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhh
Confidence 4444444 44578889887 999999986422 1344455 2222 8999999999999887777766
Q ss_pred hccCCCCCCccceEEEeccc
Q 037206 66 ASFDDLNGIKLSGIYLVQPY 85 (149)
Q Consensus 66 ~~~~~~~~~~~~~~~l~~P~ 85 (149)
+.... ..+++.++|+.|.
T Consensus 89 Lp~~~--r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 89 LPAAL--RARVAQVVLLSPS 106 (192)
T ss_pred CCHHH--HhheeEEEEeccC
Confidence 65431 3468888888874
No 111
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.43 E-value=0.0031 Score=46.75 Aligned_cols=39 Identities=15% Similarity=0.222 Sum_probs=32.7
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCCC
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGRN 89 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~ 89 (149)
.+||.+.|.|-||.|++..+.. .++|++.++.+|+++..
T Consensus 175 e~Ri~v~G~SqGGglalaaaal-------~~rik~~~~~~Pfl~df 213 (321)
T COG3458 175 EERIGVTGGSQGGGLALAAAAL-------DPRIKAVVADYPFLSDF 213 (321)
T ss_pred hhheEEeccccCchhhhhhhhc-------Chhhhcccccccccccc
Confidence 8999999999999999887632 35689999999987643
No 112
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.43 E-value=0.0073 Score=39.83 Aligned_cols=43 Identities=14% Similarity=0.156 Sum_probs=28.1
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCC-CCccceEEEecccc
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLN-GIKLSGIYLVQPYF 86 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~-~~~~~~~~l~~P~~ 86 (149)
..+|++.|||.||.||..++..+...... ...+..+..-.|.+
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 46899999999999999999887765322 13344444333443
No 113
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.43 E-value=0.0067 Score=40.92 Aligned_cols=41 Identities=17% Similarity=0.177 Sum_probs=28.9
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEecccc
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYF 86 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~ 86 (149)
..+|.+.|||.||++|..++..+.... ......++.+.|.-
T Consensus 27 ~~~i~v~GHSlGg~lA~l~a~~~~~~~--~~~~~~~~~fg~p~ 67 (153)
T cd00741 27 DYKIHVTGHSLGGALAGLAGLDLRGRG--LGRLVRVYTFGPPR 67 (153)
T ss_pred CCeEEEEEcCHHHHHHHHHHHHHHhcc--CCCceEEEEeCCCc
Confidence 478999999999999999998876531 12234455555543
No 114
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=96.30 E-value=0.025 Score=44.26 Aligned_cols=72 Identities=17% Similarity=0.050 Sum_probs=49.0
Q ss_pred hhhHHHHHHHHhhCCCEEEEEccCCCC-----CC----Ccc--c--c----chh---cccEEEeecChhhHHHHHHHHHh
Q 037206 7 STYHNYVGSHSAKANVIVVSVDYRLAP-----EH----LLG--K--T----LVL---ILLVFLRGNSAGGNIVHSMAFQA 66 (149)
Q Consensus 7 ~~~~~~~~~la~~~g~~v~~vdYrlaP-----e~----~~p--~--~----~~~---~~~i~l~G~SAGg~La~~~~~~~ 66 (149)
..++.+...|++ ++.|+.+|++--- .. .|- . + ++. .+++.++|+|.||.+++.++...
T Consensus 141 ~~w~~~~~~L~~--~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~ 218 (383)
T PLN03084 141 YSYRKVLPVLSK--NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAH 218 (383)
T ss_pred HHHHHHHHHHhc--CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhC
Confidence 355667777764 7999999998432 11 111 1 2 222 67899999999999988888654
Q ss_pred ccCCCCCCccceEEEecccc
Q 037206 67 SFDDLNGIKLSGIYLVQPYF 86 (149)
Q Consensus 67 ~~~~~~~~~~~~~~l~~P~~ 86 (149)
.+ .+++++++.|.+
T Consensus 219 P~------~v~~lILi~~~~ 232 (383)
T PLN03084 219 PD------KIKKLILLNPPL 232 (383)
T ss_pred hH------hhcEEEEECCCC
Confidence 33 377888887764
No 115
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=96.18 E-value=0.011 Score=45.29 Aligned_cols=36 Identities=19% Similarity=0.188 Sum_probs=28.6
Q ss_pred ccc-EEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccc
Q 037206 44 ILL-VFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPY 85 (149)
Q Consensus 44 ~~~-i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~ 85 (149)
.++ ++++|+|.||.+++.++....+ .+++++++.+.
T Consensus 125 ~~~~~~l~G~S~Gg~ia~~~a~~~p~------~v~~lvl~~~~ 161 (351)
T TIGR01392 125 IEQIAAVVGGSMGGMQALEWAIDYPE------RVRAIVVLATS 161 (351)
T ss_pred CCCceEEEEECHHHHHHHHHHHHChH------hhheEEEEccC
Confidence 667 9999999999999999876533 36777777654
No 116
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=96.13 E-value=0.078 Score=38.39 Aligned_cols=79 Identities=15% Similarity=0.167 Sum_probs=47.4
Q ss_pred CCchhhHHHHHHHHh-------hCCCEEEEEccCCCCCCCccc------cchh----------------cccEEEeecCh
Q 037206 4 PFCSTYHNYVGSHSA-------KANVIVVSVDYRLAPEHLLGK------TLVL----------------ILLVFLRGNSA 54 (149)
Q Consensus 4 ~~~~~~~~~~~~la~-------~~g~~v~~vdYrlaPe~~~p~------~~~~----------------~~~i~l~G~SA 54 (149)
|+.++.+.++..+-+ ...+.++.+||.-....-... .++. +++|+++|||+
T Consensus 15 Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSm 94 (225)
T PF07819_consen 15 GSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSM 94 (225)
T ss_pred CCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEch
Confidence 334555555555522 135789999997643222212 1111 89999999999
Q ss_pred hhHHHHHHHHHhccCCCCCCccceEEEeccc
Q 037206 55 GGNIVHSMAFQASFDDLNGIKLSGIYLVQPY 85 (149)
Q Consensus 55 Gg~La~~~~~~~~~~~~~~~~~~~~~l~~P~ 85 (149)
||-+|..++...... ...++.++.+.-.
T Consensus 95 GGlvar~~l~~~~~~---~~~v~~iitl~tP 122 (225)
T PF07819_consen 95 GGLVARSALSLPNYD---PDSVKTIITLGTP 122 (225)
T ss_pred hhHHHHHHHhccccc---cccEEEEEEEcCC
Confidence 998777776543322 2457777765533
No 117
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=96.06 E-value=0.023 Score=42.08 Aligned_cols=68 Identities=18% Similarity=0.037 Sum_probs=48.7
Q ss_pred HHhhCCCEEEEEccCCCCC---CC---ccc---------cchh-----cccEEEeecChhhHHHHHHHHHhccCCCCCCc
Q 037206 16 HSAKANVIVVSVDYRLAPE---HL---LGK---------TLVL-----ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIK 75 (149)
Q Consensus 16 la~~~g~~v~~vdYrlaPe---~~---~p~---------~~~~-----~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~ 75 (149)
++++ |++||.+|-|=.-. .. .+. +|+. ..||.++|.|.+|..++.++.. ..+.
T Consensus 53 ~~~~-GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~------~~p~ 125 (272)
T PF02129_consen 53 FAER-GYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAAR------RPPH 125 (272)
T ss_dssp HHHT-T-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTT------T-TT
T ss_pred HHhC-CCEEEEECCcccccCCCccccCChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhc------CCCC
Confidence 6665 99999999995421 11 222 8887 7799999999999988888752 2456
Q ss_pred cceEEEeccccCCCC
Q 037206 76 LSGIYLVQPYFGRNY 90 (149)
Q Consensus 76 ~~~~~l~~P~~~~~~ 90 (149)
+++++...++.|...
T Consensus 126 LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 126 LKAIVPQSGWSDLYR 140 (272)
T ss_dssp EEEEEEESE-SBTCC
T ss_pred ceEEEecccCCcccc
Confidence 899999999888765
No 118
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.03 E-value=0.02 Score=44.83 Aligned_cols=82 Identities=16% Similarity=0.207 Sum_probs=55.6
Q ss_pred hhHHHHHHHHhhCCC----EEEE--EccCCCCCC---Cccc--cchh------cccEEEeecChhhHHHHHHHHHhccCC
Q 037206 8 TYHNYVGSHSAKANV----IVVS--VDYRLAPEH---LLGK--TLVL------ILLVFLRGNSAGGNIVHSMAFQASFDD 70 (149)
Q Consensus 8 ~~~~~~~~la~~~g~----~v~~--vdYrlaPe~---~~p~--~~~~------~~~i~l~G~SAGg~La~~~~~~~~~~~ 70 (149)
.+..+...|.+ .|+ .++. -|.|++|.. -+.. +.+. ..+|+|+|||.||.++..+........
T Consensus 66 ~~~~li~~L~~-~GY~~~~~l~~~pYDWR~~~~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~ 144 (389)
T PF02450_consen 66 YFAKLIENLEK-LGYDRGKDLFAAPYDWRLSPAERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEE 144 (389)
T ss_pred hHHHHHHHHHh-cCcccCCEEEEEeechhhchhhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchh
Confidence 47788888876 354 3344 588999981 1111 1111 789999999999999999887764432
Q ss_pred CCCCccceEEEeccccCCCC
Q 037206 71 LNGIKLSGIYLVQPYFGRNY 90 (149)
Q Consensus 71 ~~~~~~~~~~l~~P~~~~~~ 90 (149)
.....|+..|.++|.+..+.
T Consensus 145 W~~~~i~~~i~i~~p~~Gs~ 164 (389)
T PF02450_consen 145 WKDKYIKRFISIGTPFGGSP 164 (389)
T ss_pred hHHhhhhEEEEeCCCCCCCh
Confidence 11346889999888766553
No 119
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=95.99 E-value=0.052 Score=41.42 Aligned_cols=57 Identities=16% Similarity=0.175 Sum_probs=37.2
Q ss_pred chhhHHHHHHHHhhCCCEEEEEccCCCCC--CCccc--------------cchh----cccEEEeecChhhHHHHHHH
Q 037206 6 CSTYHNYVGSHSAKANVIVVSVDYRLAPE--HLLGK--------------TLVL----ILLVFLRGNSAGGNIVHSMA 63 (149)
Q Consensus 6 ~~~~~~~~~~la~~~g~~v~~vdYrlaPe--~~~p~--------------~~~~----~~~i~l~G~SAGg~La~~~~ 63 (149)
+..-+.+.+.+.+ .|+.||.++.|-.-. ++-|. +|++ +.++..+|.|-||++-+...
T Consensus 90 s~y~r~L~~~~~~-rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~yl 166 (345)
T COG0429 90 SPYARGLMRALSR-RGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYL 166 (345)
T ss_pred CHHHHHHHHHHHh-cCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHH
Confidence 3333444555555 499999999996422 22344 3443 89999999999996544443
No 120
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.98 E-value=0.018 Score=43.60 Aligned_cols=62 Identities=23% Similarity=0.220 Sum_probs=43.8
Q ss_pred CCCCchhhHHHHHHHHhhCCCEEEEEccCCCCCCCccc------------cchh-------cccEEEeecChhh-HHHHH
Q 037206 2 GSPFCSTYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK------------TLVL-------ILLVFLRGNSAGG-NIVHS 61 (149)
Q Consensus 2 ~s~~~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~------------~~~~-------~~~i~l~G~SAGg-~La~~ 61 (149)
||+ ...+.+.+.|++..+..|+.+|-|---..|+-+ .|+. ..++.+.|||+|| .++++
T Consensus 63 GS~--~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~ 140 (315)
T KOG2382|consen 63 GSK--ENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMA 140 (315)
T ss_pred cCC--CCHHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccccccCCceecccCcchHHHHHH
Confidence 444 667789999999999999999999643333322 2222 6789999999999 44444
Q ss_pred HHHH
Q 037206 62 MAFQ 65 (149)
Q Consensus 62 ~~~~ 65 (149)
.+..
T Consensus 141 ~t~~ 144 (315)
T KOG2382|consen 141 ETLK 144 (315)
T ss_pred HHHh
Confidence 4443
No 121
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=95.91 E-value=0.015 Score=42.17 Aligned_cols=40 Identities=13% Similarity=0.056 Sum_probs=32.7
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCCC
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGRN 89 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~ 89 (149)
+++.+|+|.|+||..|+.++++..+ ...+++++||.++..
T Consensus 114 ~~~~~i~G~S~GG~~Al~~~l~~Pd------~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 114 PDRRAIAGHSMGGYGALYLALRHPD------LFGAVIAFSGALDPS 153 (251)
T ss_dssp ECCEEEEEETHHHHHHHHHHHHSTT------TESEEEEESEESETT
T ss_pred cceeEEeccCCCcHHHHHHHHhCcc------ccccccccCcccccc
Confidence 4449999999999999999987544 388999999886654
No 122
>PRK06489 hypothetical protein; Provisional
Probab=95.90 E-value=0.025 Score=43.55 Aligned_cols=59 Identities=14% Similarity=0.084 Sum_probs=38.8
Q ss_pred CCCEEEEEccCCC-----CCCC-------cc--c------cchh----cccEE-EeecChhhHHHHHHHHHhccCCCCCC
Q 037206 20 ANVIVVSVDYRLA-----PEHL-------LG--K------TLVL----ILLVF-LRGNSAGGNIVHSMAFQASFDDLNGI 74 (149)
Q Consensus 20 ~g~~v~~vdYrla-----Pe~~-------~p--~------~~~~----~~~i~-l~G~SAGg~La~~~~~~~~~~~~~~~ 74 (149)
.++.|+.+|+|=- |+.. |. . .++. .+++. ++|+|.||.+|+.++....+
T Consensus 104 ~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~------ 177 (360)
T PRK06489 104 SKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPD------ 177 (360)
T ss_pred cCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCch------
Confidence 3799999999843 2221 11 1 1121 45764 89999999999999976543
Q ss_pred ccceEEEecc
Q 037206 75 KLSGIYLVQP 84 (149)
Q Consensus 75 ~~~~~~l~~P 84 (149)
+++++|++++
T Consensus 178 ~V~~LVLi~s 187 (360)
T PRK06489 178 FMDALMPMAS 187 (360)
T ss_pred hhheeeeecc
Confidence 3666666654
No 123
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.88 E-value=0.01 Score=43.00 Aligned_cols=38 Identities=21% Similarity=0.322 Sum_probs=28.9
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEec
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQ 83 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~ 83 (149)
+.+|.+.|||-||+||..++..+.... ..+|..++.+-
T Consensus 83 ~~~i~v~GHSkGGnLA~yaa~~~~~~~--~~rI~~vy~fD 120 (224)
T PF11187_consen 83 PGKIYVTGHSKGGNLAQYAAANCDDEI--QDRISKVYSFD 120 (224)
T ss_pred CCCEEEEEechhhHHHHHHHHHccHHH--hhheeEEEEee
Confidence 677999999999999999998865531 23566666544
No 124
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=95.83 E-value=0.0073 Score=49.64 Aligned_cols=39 Identities=26% Similarity=0.286 Sum_probs=33.1
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCC
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGR 88 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~ 88 (149)
+++|+++|.||||.|...++....+ ..+|+|+..|++|.
T Consensus 526 ~~~i~a~GGSAGGmLmGav~N~~P~------lf~~iiA~VPFVDv 564 (682)
T COG1770 526 PDRIVAIGGSAGGMLMGAVANMAPD------LFAGIIAQVPFVDV 564 (682)
T ss_pred ccceEEeccCchhHHHHHHHhhChh------hhhheeecCCccch
Confidence 8999999999999998888865443 47899999998875
No 125
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=95.75 E-value=0.024 Score=45.07 Aligned_cols=80 Identities=13% Similarity=0.010 Sum_probs=50.1
Q ss_pred CchhhHHHHHHHHhhCCCEEEEEc-------cCCCCCCCccc------cchh-------cccEEEeecChhhHHHHHHHH
Q 037206 5 FCSTYHNYVGSHSAKANVIVVSVD-------YRLAPEHLLGK------TLVL-------ILLVFLRGNSAGGNIVHSMAF 64 (149)
Q Consensus 5 ~~~~~~~~~~~la~~~g~~v~~vd-------YrlaPe~~~p~------~~~~-------~~~i~l~G~SAGg~La~~~~~ 64 (149)
....++.+...|.+. |+.+ ..| .|.+. ..+. +.+. ..+++++|||+||.++..++.
T Consensus 106 ~~~~~~~li~~L~~~-GY~~-~~dL~g~gYDwR~~~--~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 106 EVYYFHDMIEQLIKW-GYKE-GKTLFGFGYDFRQSN--RLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred hHHHHHHHHHHHHHc-CCcc-CCCcccCCCCccccc--cHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHH
Confidence 346677788888875 8764 333 23321 1111 1111 578999999999999998876
Q ss_pred HhccCCCCCCccceEEEeccccCCCC
Q 037206 65 QASFDDLNGIKLSGIYLVQPYFGRNY 90 (149)
Q Consensus 65 ~~~~~~~~~~~~~~~~l~~P~~~~~~ 90 (149)
...+. . ...++.+|++++.++.+.
T Consensus 182 ~~p~~-~-~k~I~~~I~la~P~~Gs~ 205 (440)
T PLN02733 182 LHSDV-F-EKYVNSWIAIAAPFQGAP 205 (440)
T ss_pred HCCHh-H-HhHhccEEEECCCCCCCc
Confidence 53321 1 234778888887766553
No 126
>COG0627 Predicted esterase [General function prediction only]
Probab=95.74 E-value=0.02 Score=43.64 Aligned_cols=42 Identities=14% Similarity=0.258 Sum_probs=28.5
Q ss_pred HHHHHhcC-CCceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhccc
Q 037206 99 IYFENCGW-AGETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNRDN 147 (149)
Q Consensus 99 ~~~~~l~~-~~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~~~ 147 (149)
.|.+++++ +.+.++...++..|+|..+. ..++....|+.+.+
T Consensus 270 ~~~~a~~~~g~~~~~~~~~~G~Hsw~~w~-------~~l~~~~~~~a~~l 312 (316)
T COG0627 270 AFAEALRAAGIPNGVRDQPGGDHSWYFWA-------SQLADHLPWLAGAL 312 (316)
T ss_pred HHHHHHHhcCCCceeeeCCCCCcCHHHHH-------HHHHHHHHHHHHHh
Confidence 56666765 44888888899999987653 45566666655443
No 127
>PRK07868 acyl-CoA synthetase; Validated
Probab=95.55 E-value=0.051 Score=47.48 Aligned_cols=70 Identities=17% Similarity=0.076 Sum_probs=46.0
Q ss_pred HHHHHHhhCCCEEEEEccCCCCC--CCccc---cchh-------------cccEEEeecChhhHHHHHHHHHhccCCCCC
Q 037206 12 YVGSHSAKANVIVVSVDYRLAPE--HLLGK---TLVL-------------ILLVFLRGNSAGGNIVHSMAFQASFDDLNG 73 (149)
Q Consensus 12 ~~~~la~~~g~~v~~vdYrlaPe--~~~p~---~~~~-------------~~~i~l~G~SAGg~La~~~~~~~~~~~~~~ 73 (149)
+...|+++ |+.|+.+|+..... ..+.. .++. .+++.++|+|.||.+++.++.....
T Consensus 91 ~v~~L~~~-g~~v~~~d~G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~----- 164 (994)
T PRK07868 91 AVGILHRA-GLDPWVIDFGSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRS----- 164 (994)
T ss_pred HHHHHHHC-CCEEEEEcCCCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCC-----
Confidence 46777776 99999999974321 11111 2221 3689999999999999888764222
Q ss_pred CccceEEEeccccC
Q 037206 74 IKLSGIYLVQPYFG 87 (149)
Q Consensus 74 ~~~~~~~l~~P~~~ 87 (149)
.++++++++...+|
T Consensus 165 ~~v~~lvl~~~~~d 178 (994)
T PRK07868 165 KDIASIVTFGSPVD 178 (994)
T ss_pred CccceEEEEecccc
Confidence 24677777665544
No 128
>COG3150 Predicted esterase [General function prediction only]
Probab=95.48 E-value=0.039 Score=38.17 Aligned_cols=49 Identities=16% Similarity=0.129 Sum_probs=33.7
Q ss_pred CCCEEEEEccCCCCCCCccc-------cchh---cccEEEeecChhhHHHHHHHHHhcc
Q 037206 20 ANVIVVSVDYRLAPEHLLGK-------TLVL---ILLVFLRGNSAGGNIVHSMAFQASF 68 (149)
Q Consensus 20 ~g~~v~~vdYrlaPe~~~p~-------~~~~---~~~i~l~G~SAGg~La~~~~~~~~~ 68 (149)
.+-.+-.++|+..=-.++|+ +-+. ..++.++|.|-||+.|-.++..+.-
T Consensus 24 ~~~~~~~i~y~~p~l~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~Gi 82 (191)
T COG3150 24 IDEDVRDIEYSTPHLPHDPQQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLCGI 82 (191)
T ss_pred HhccccceeeecCCCCCCHHHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHhCC
Confidence 34566777777543345555 2222 4559999999999999999877654
No 129
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.37 E-value=0.024 Score=41.31 Aligned_cols=58 Identities=16% Similarity=0.231 Sum_probs=42.1
Q ss_pred hhhHHHHHHHHhhCCCEEEEEccCCCCCCCccc---------cchh---------------cccEEEeecChhhHHHHHH
Q 037206 7 STYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK---------TLVL---------------ILLVFLRGNSAGGNIVHSM 62 (149)
Q Consensus 7 ~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~---------~~~~---------------~~~i~l~G~SAGg~La~~~ 62 (149)
..|+++++..+++ |+.|+..|||=.-+..-+. .|.. .-..+.+|||.||++...+
T Consensus 44 ~fYRrfA~~a~~~-Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~ 122 (281)
T COG4757 44 YFYRRFAAAAAKA-GFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLL 122 (281)
T ss_pred hHhHHHHHHhhcc-CceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeeccc
Confidence 4688888888876 9999999999765444333 2221 4458899999999976655
Q ss_pred HHH
Q 037206 63 AFQ 65 (149)
Q Consensus 63 ~~~ 65 (149)
...
T Consensus 123 ~~~ 125 (281)
T COG4757 123 GQH 125 (281)
T ss_pred ccC
Confidence 543
No 130
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=95.36 E-value=0.047 Score=41.88 Aligned_cols=54 Identities=13% Similarity=0.146 Sum_probs=41.1
Q ss_pred HHHHHHhhCCCEEEEEccCCCCCCCccc-------------cchh-------cccEEEeecChhhHHHHHHHHH
Q 037206 12 YVGSHSAKANVIVVSVDYRLAPEHLLGK-------------TLVL-------ILLVFLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 12 ~~~~la~~~g~~v~~vdYrlaPe~~~p~-------------~~~~-------~~~i~l~G~SAGg~La~~~~~~ 65 (149)
-...+++++++.|+..+||---..+=+. +|+. +++|++.|+|-||.+++.++..
T Consensus 162 ~~~~~ak~~~aNvl~fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~ 235 (365)
T PF05677_consen 162 WIQRFAKELGANVLVFNYPGVGSSTGPPSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKK 235 (365)
T ss_pred HHHHHHHHcCCcEEEECCCccccCCCCCCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHh
Confidence 4678999999999999999643322222 5654 6999999999999997765443
No 131
>PLN02872 triacylglycerol lipase
Probab=95.29 E-value=0.0075 Score=47.31 Aligned_cols=53 Identities=13% Similarity=0.018 Sum_probs=36.5
Q ss_pred HHHHHHHHhhCCCEEEEEccCCCC----------C-CC-----ccc----------cchh---cccEEEeecChhhHHHH
Q 037206 10 HNYVGSHSAKANVIVVSVDYRLAP----------E-HL-----LGK----------TLVL---ILLVFLRGNSAGGNIVH 60 (149)
Q Consensus 10 ~~~~~~la~~~g~~v~~vdYrlaP----------e-~~-----~p~----------~~~~---~~~i~l~G~SAGg~La~ 60 (149)
..++..|+.+ |+.|+.+|.|-.. . .. +.. +++. .+++.++|+|.||.+++
T Consensus 97 ~sla~~La~~-GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~ 175 (395)
T PLN02872 97 QSLGFILADH-GFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSL 175 (395)
T ss_pred cchHHHHHhC-CCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHH
Confidence 4566677765 9999999998532 1 11 111 3332 57999999999999988
Q ss_pred HHH
Q 037206 61 SMA 63 (149)
Q Consensus 61 ~~~ 63 (149)
.++
T Consensus 176 ~~~ 178 (395)
T PLN02872 176 AAL 178 (395)
T ss_pred HHh
Confidence 554
No 132
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.21 E-value=0.03 Score=40.29 Aligned_cols=42 Identities=19% Similarity=0.317 Sum_probs=30.0
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEecccc
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYF 86 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~ 86 (149)
..+|++.|||.||.+|..++..+.... ....+.++..-+|-+
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l~~~~-~~~~i~~~tFg~P~v 168 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDLRLRG-PGSDVTVYTFGQPRV 168 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHhhC-CCCceEEEEeCCCCC
Confidence 468999999999999999988776542 123456555555554
No 133
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=95.18 E-value=0.088 Score=40.05 Aligned_cols=68 Identities=15% Similarity=0.165 Sum_probs=48.9
Q ss_pred hHHHHHHHHhhCCCEEEEEccCCCCCCCccc---------------cchh---cccEEEeecChhhHHHHHHHHHhccCC
Q 037206 9 YHNYVGSHSAKANVIVVSVDYRLAPEHLLGK---------------TLVL---ILLVFLRGNSAGGNIVHSMAFQASFDD 70 (149)
Q Consensus 9 ~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~---------------~~~~---~~~i~l~G~SAGg~La~~~~~~~~~~~ 70 (149)
.+.....|+.+ |+.|+++|.|-.-...-|. .++. .+++++.||+-||-+|..++....++
T Consensus 60 wr~q~~~la~~-~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Per- 137 (322)
T KOG4178|consen 60 WRHQIPGLASR-GYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPER- 137 (322)
T ss_pred hhhhhhhhhhc-ceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhh-
Confidence 34456677776 8999999999754433333 2222 99999999999999999999876654
Q ss_pred CCCCccceEEEec
Q 037206 71 LNGIKLSGIYLVQ 83 (149)
Q Consensus 71 ~~~~~~~~~~l~~ 83 (149)
+++.++++
T Consensus 138 -----v~~lv~~n 145 (322)
T KOG4178|consen 138 -----VDGLVTLN 145 (322)
T ss_pred -----cceEEEec
Confidence 55555444
No 134
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=95.13 E-value=0.17 Score=36.69 Aligned_cols=58 Identities=17% Similarity=0.143 Sum_probs=40.0
Q ss_pred HHHHHHHHhhCCCEEEEEccCCCCCC---Cccc-------------cchh-cccE--EEeecChhhHHHHHHHHHhcc
Q 037206 10 HNYVGSHSAKANVIVVSVDYRLAPEH---LLGK-------------TLVL-ILLV--FLRGNSAGGNIVHSMAFQASF 68 (149)
Q Consensus 10 ~~~~~~la~~~g~~v~~vdYrlaPe~---~~p~-------------~~~~-~~~i--~l~G~SAGg~La~~~~~~~~~ 68 (149)
..++..+++. |+-++=+|++---|. -+|- +++. .+++ ++.|||-||..++..+....+
T Consensus 52 ~~vA~~~e~~-gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d 128 (269)
T KOG4667|consen 52 KNVAKALEKE-GISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHD 128 (269)
T ss_pred HHHHHHHHhc-CceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcC
Confidence 3467777776 999999999965432 1222 3333 3333 578999999999999876654
No 135
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=95.07 E-value=0.043 Score=41.46 Aligned_cols=80 Identities=13% Similarity=0.061 Sum_probs=47.7
Q ss_pred hHHHHHHHHhhCCCEEEEEccCCC-CCCCccc------------cchh--------cccEEEeecChhhHHHHHHHHHhc
Q 037206 9 YHNYVGSHSAKANVIVVSVDYRLA-PEHLLGK------------TLVL--------ILLVFLRGNSAGGNIVHSMAFQAS 67 (149)
Q Consensus 9 ~~~~~~~la~~~g~~v~~vdYrla-Pe~~~p~------------~~~~--------~~~i~l~G~SAGg~La~~~~~~~~ 67 (149)
...++..+ ...+..|+.+..+-+ ...-+.. +|++ .++|+|||||-|-+-++..+....
T Consensus 52 ~~~La~aL-~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~ 130 (303)
T PF08538_consen 52 LPDLAEAL-EETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPN 130 (303)
T ss_dssp HHHHHHHH-T-TT-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-T
T ss_pred HHHHHHHh-ccCCeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccC
Confidence 34455555 446999999988864 3333333 5555 468999999999999999988765
Q ss_pred cCCCCCCccceEEEeccccCCCC
Q 037206 68 FDDLNGIKLSGIYLVQPYFGRNY 90 (149)
Q Consensus 68 ~~~~~~~~~~~~~l~~P~~~~~~ 90 (149)
... ..+.+.|+||-.|+-|.+.
T Consensus 131 ~~~-~~~~VdG~ILQApVSDREa 152 (303)
T PF08538_consen 131 PSP-SRPPVDGAILQAPVSDREA 152 (303)
T ss_dssp T----CCCEEEEEEEEE---TTS
T ss_pred ccc-cccceEEEEEeCCCCChhH
Confidence 421 1467999999999887653
No 136
>PRK07581 hypothetical protein; Validated
Probab=94.97 E-value=0.051 Score=41.30 Aligned_cols=35 Identities=14% Similarity=-0.001 Sum_probs=27.1
Q ss_pred ccc-EEEeecChhhHHHHHHHHHhccCCCCCCccceEEEecc
Q 037206 44 ILL-VFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQP 84 (149)
Q Consensus 44 ~~~-i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P 84 (149)
.++ ..|+|+|.||.+|+.++....+. +++++++++
T Consensus 122 i~~~~~lvG~S~GG~va~~~a~~~P~~------V~~Lvli~~ 157 (339)
T PRK07581 122 IERLALVVGWSMGAQQTYHWAVRYPDM------VERAAPIAG 157 (339)
T ss_pred CCceEEEEEeCHHHHHHHHHHHHCHHH------Hhhheeeec
Confidence 678 47899999999999999876543 666666643
No 137
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=94.93 E-value=0.15 Score=47.02 Aligned_cols=70 Identities=21% Similarity=0.185 Sum_probs=46.7
Q ss_pred hhhHHHHHHHHhhCCCEEEEEccCCCCCCCc-----------c----c--cchh-------cccEEEeecChhhHHHHHH
Q 037206 7 STYHNYVGSHSAKANVIVVSVDYRLAPEHLL-----------G----K--TLVL-------ILLVFLRGNSAGGNIVHSM 62 (149)
Q Consensus 7 ~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~-----------p----~--~~~~-------~~~i~l~G~SAGg~La~~~ 62 (149)
..+..+...|++ ++.|+.+|+|---+... . . .++. .+++.++|+|.||.+++.+
T Consensus 1385 ~~w~~~~~~L~~--~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~ 1462 (1655)
T PLN02980 1385 EDWIPIMKAISG--SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYM 1462 (1655)
T ss_pred HHHHHHHHHHhC--CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHH
Confidence 445566777754 58999999985322211 0 0 2221 6799999999999999999
Q ss_pred HHHhccCCCCCCccceEEEecc
Q 037206 63 AFQASFDDLNGIKLSGIYLVQP 84 (149)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~l~~P 84 (149)
+....+ .+++++++++
T Consensus 1463 A~~~P~------~V~~lVlis~ 1478 (1655)
T PLN02980 1463 ALRFSD------KIEGAVIISG 1478 (1655)
T ss_pred HHhChH------hhCEEEEECC
Confidence 875433 3666666654
No 138
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=94.91 E-value=0.15 Score=40.17 Aligned_cols=79 Identities=9% Similarity=-0.098 Sum_probs=56.3
Q ss_pred HHHHHHHHhhCCCEEEEEccCCCCCCCccc------cchh---------cccEEEeecChhhHHHHHHHHHhccCCCCCC
Q 037206 10 HNYVGSHSAKANVIVVSVDYRLAPEHLLGK------TLVL---------ILLVFLRGNSAGGNIVHSMAFQASFDDLNGI 74 (149)
Q Consensus 10 ~~~~~~la~~~g~~v~~vdYrlaPe~~~p~------~~~~---------~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~ 74 (149)
+.+.+.|.. |..|+.+|+.-+-..+..+ .|+. ..++-++|-|.||.++++.+....+.+. +.
T Consensus 120 RS~V~~Ll~--g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~~v~l~GvCqgG~~~laa~Al~a~~~~-p~ 196 (406)
T TIGR01849 120 RSTVEALLP--DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGPDIHVIAVCQPAVPVLAAVALMAENEP-PA 196 (406)
T ss_pred HHHHHHHhC--CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCCCCcEEEEchhhHHHHHHHHHHHhcCC-CC
Confidence 445566654 8999999998765443323 2222 3339999999999999988877665531 23
Q ss_pred ccceEEEeccccCCCCC
Q 037206 75 KLSGIYLVQPYFGRNYG 91 (149)
Q Consensus 75 ~~~~~~l~~P~~~~~~~ 91 (149)
+|+.++++.+.+|....
T Consensus 197 ~~~sltlm~~PID~~~~ 213 (406)
T TIGR01849 197 QPRSMTLMGGPIDARAS 213 (406)
T ss_pred CcceEEEEecCccCCCC
Confidence 58999999999998753
No 139
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=94.64 E-value=0.11 Score=38.11 Aligned_cols=65 Identities=17% Similarity=0.190 Sum_probs=47.8
Q ss_pred CCCCCchhhHHHHHHHHhhCCCEEEEEccCCCCCCCccc-----cc------hh--------cccEEEeecChhhHHHHH
Q 037206 1 MGSPFCSTYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK-----TL------VL--------ILLVFLRGNSAGGNIVHS 61 (149)
Q Consensus 1 ~~s~~~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~-----~~------~~--------~~~i~l~G~SAGg~La~~ 61 (149)
+|+.+.-+|+.+++.|+++ |++|++.-|...=+|---+ +| +. .-.++=+|||.|.=|-+.
T Consensus 28 ~ga~P~itYr~lLe~La~~-Gy~ViAtPy~~tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlL 106 (250)
T PF07082_consen 28 VGAAPQITYRYLLERLADR-GYAVIATPYVVTFDHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLL 106 (250)
T ss_pred eccCcHHHHHHHHHHHHhC-CcEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHH
Confidence 5788899999999999987 9999999997654433333 11 11 125788999999988777
Q ss_pred HHHHh
Q 037206 62 MAFQA 66 (149)
Q Consensus 62 ~~~~~ 66 (149)
+....
T Consensus 107 i~s~~ 111 (250)
T PF07082_consen 107 IGSLF 111 (250)
T ss_pred Hhhhc
Confidence 76543
No 140
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=94.46 E-value=0.24 Score=39.25 Aligned_cols=72 Identities=13% Similarity=0.187 Sum_probs=46.9
Q ss_pred HHHHHHHhhCCCEEEEEccCCCCC-CCccc------cchh-----------------------cccEEEeecChhhHHHH
Q 037206 11 NYVGSHSAKANVIVVSVDYRLAPE-HLLGK------TLVL-----------------------ILLVFLRGNSAGGNIVH 60 (149)
Q Consensus 11 ~~~~~la~~~g~~v~~vdYrlaPe-~~~p~------~~~~-----------------------~~~i~l~G~SAGg~La~ 60 (149)
.+...||++.|..|+.++.|-.-+ .|++. +|+. ..+++++|.|-||.||+
T Consensus 49 ~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laa 128 (434)
T PF05577_consen 49 GFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAA 128 (434)
T ss_dssp HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHH
T ss_pred ChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHH
Confidence 377889999999999999998754 34444 2221 45899999999999999
Q ss_pred HHHHHhccCCCCCCccceEEEeccccCC
Q 037206 61 SMAFQASFDDLNGIKLSGIYLVQPYFGR 88 (149)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~l~~P~~~~ 88 (149)
.+-..... .+.|.+.-|+.+..
T Consensus 129 w~r~kyP~------~~~ga~ASSapv~a 150 (434)
T PF05577_consen 129 WFRLKYPH------LFDGAWASSAPVQA 150 (434)
T ss_dssp HHHHH-TT------T-SEEEEET--CCH
T ss_pred HHHhhCCC------eeEEEEeccceeee
Confidence 88665543 26777777765543
No 141
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=94.43 E-value=0.053 Score=38.72 Aligned_cols=42 Identities=7% Similarity=-0.066 Sum_probs=25.8
Q ss_pred cEEEeecChhhHHHHHHHHHhccCCC--CCCccceEEEeccccC
Q 037206 46 LVFLRGNSAGGNIVHSMAFQASFDDL--NGIKLSGIYLVQPYFG 87 (149)
Q Consensus 46 ~i~l~G~SAGg~La~~~~~~~~~~~~--~~~~~~~~~l~~P~~~ 87 (149)
-..|+|+|-||.+|+.++........ ..+.++.+|+++++.-
T Consensus 103 fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p 146 (212)
T PF03959_consen 103 FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPP 146 (212)
T ss_dssp -SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----
T ss_pred eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCC
Confidence 47899999999999998876543221 2356788888887643
No 142
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=94.14 E-value=0.096 Score=37.56 Aligned_cols=57 Identities=19% Similarity=0.125 Sum_probs=40.6
Q ss_pred HHHHHHHhhCCCEEEEEccC-----CCCCCCccccchh--------------cccEEEeecChhhHHHHHHHHHhc
Q 037206 11 NYVGSHSAKANVIVVSVDYR-----LAPEHLLGKTLVL--------------ILLVFLRGNSAGGNIVHSMAFQAS 67 (149)
Q Consensus 11 ~~~~~la~~~g~~v~~vdYr-----laPe~~~p~~~~~--------------~~~i~l~G~SAGg~La~~~~~~~~ 67 (149)
.-...+-+....+||..|=+ ..||.+||.++.. ..++.|+|.|-||--|+.++....
T Consensus 61 pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~ 136 (277)
T KOG2984|consen 61 PQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGK 136 (277)
T ss_pred HHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccCh
Confidence 33445556667889988754 3588888882222 899999999999987777765443
No 143
>PLN02454 triacylglycerol lipase
Probab=93.86 E-value=0.098 Score=41.22 Aligned_cols=40 Identities=23% Similarity=0.385 Sum_probs=26.7
Q ss_pred cEEEeecChhhHHHHHHHHHhccCCCC--CCccceEEEeccc
Q 037206 46 LVFLRGNSAGGNIVHSMAFQASFDDLN--GIKLSGIYLVQPY 85 (149)
Q Consensus 46 ~i~l~G~SAGg~La~~~~~~~~~~~~~--~~~~~~~~l~~P~ 85 (149)
+|++.|||.||.||...+..+...+.. ...+.++..-+|-
T Consensus 229 sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPR 270 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQ 270 (414)
T ss_pred eEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCc
Confidence 499999999999999999776554321 1234444444443
No 144
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.84 E-value=0.26 Score=36.52 Aligned_cols=65 Identities=17% Similarity=0.072 Sum_probs=46.6
Q ss_pred CCchhhHHHHHHHHhhCCCEEEEEccCCC--CCCCc---cc---cchh-------cccEEEeecChhhHHHHHHHHHhcc
Q 037206 4 PFCSTYHNYVGSHSAKANVIVVSVDYRLA--PEHLL---GK---TLVL-------ILLVFLRGNSAGGNIVHSMAFQASF 68 (149)
Q Consensus 4 ~~~~~~~~~~~~la~~~g~~v~~vdYrla--Pe~~~---p~---~~~~-------~~~i~l~G~SAGg~La~~~~~~~~~ 68 (149)
|.-..|..++..+... ..|+.++++-. .+.++ ++ .|+. ...+.|.|.|.||++|..++.++..
T Consensus 11 G~~~~~~~L~~~l~~~--~~v~~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~~ 88 (257)
T COG3319 11 GSVLAYAPLAAALGPL--LPVYGLQAPGYGAGEQPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQLEA 88 (257)
T ss_pred CcHHHHHHHHHHhccC--ceeeccccCcccccccccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccHHHHHHHHHHHh
Confidence 3344566667777654 78888888754 23333 33 4444 6779999999999999999999887
Q ss_pred CC
Q 037206 69 DD 70 (149)
Q Consensus 69 ~~ 70 (149)
.+
T Consensus 89 ~G 90 (257)
T COG3319 89 QG 90 (257)
T ss_pred CC
Confidence 64
No 145
>PRK05855 short chain dehydrogenase; Validated
Probab=93.75 E-value=0.23 Score=40.20 Aligned_cols=57 Identities=18% Similarity=0.059 Sum_probs=37.1
Q ss_pred hhhHHHHHHHHhhCCCEEEEEccCCCCCCC---------ccc------cchh---ccc-EEEeecChhhHHHHHHHHH
Q 037206 7 STYHNYVGSHSAKANVIVVSVDYRLAPEHL---------LGK------TLVL---ILL-VFLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 7 ~~~~~~~~~la~~~g~~v~~vdYrlaPe~~---------~p~------~~~~---~~~-i~l~G~SAGg~La~~~~~~ 65 (149)
..++.+...| .+ ++.|+.+|+|-.-... +.. ..+. ..+ +.++|+|.||.+++.++..
T Consensus 39 ~~w~~~~~~L-~~-~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 39 EVWDGVAPLL-AD-RFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred HHHHHHHHHh-hc-ceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhC
Confidence 4456677777 33 7999999998542211 111 1121 445 9999999999888766544
No 146
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=93.59 E-value=0.22 Score=38.40 Aligned_cols=54 Identities=13% Similarity=0.067 Sum_probs=37.3
Q ss_pred HHHHHHhhCCCEEEEEccCC----CCCCCccc-----------------------cchh---cccEEEeecChhhHHHHH
Q 037206 12 YVGSHSAKANVIVVSVDYRL----APEHLLGK-----------------------TLVL---ILLVFLRGNSAGGNIVHS 61 (149)
Q Consensus 12 ~~~~la~~~g~~v~~vdYrl----aPe~~~p~-----------------------~~~~---~~~i~l~G~SAGg~La~~ 61 (149)
++..|+++ |+..+.++-.- -|....-. .|+. ..++++.|-|.||++|.+
T Consensus 113 ~a~pLl~~-gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~~~G~~~~g~~G~SmGG~~A~l 191 (348)
T PF09752_consen 113 MARPLLKE-GIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLEREGYGPLGLTGISMGGHMAAL 191 (348)
T ss_pred hhhHHHHc-CcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHHhcCCCceEEEEechhHhhHHh
Confidence 37778888 99877776222 22222211 5555 789999999999999998
Q ss_pred HHHHh
Q 037206 62 MAFQA 66 (149)
Q Consensus 62 ~~~~~ 66 (149)
++...
T Consensus 192 aa~~~ 196 (348)
T PF09752_consen 192 AASNW 196 (348)
T ss_pred hhhcC
Confidence 87643
No 147
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.34 E-value=0.21 Score=36.54 Aligned_cols=72 Identities=14% Similarity=0.106 Sum_probs=48.8
Q ss_pred CCchhhHHHHHHHHhhCCCEEEEEccCCC-------CCCCccc---------c-chhcccEEEeecChhhHHHHHHHHHh
Q 037206 4 PFCSTYHNYVGSHSAKANVIVVSVDYRLA-------PEHLLGK---------T-LVLILLVFLRGNSAGGNIVHSMAFQA 66 (149)
Q Consensus 4 ~~~~~~~~~~~~la~~~g~~v~~vdYrla-------Pe~~~p~---------~-~~~~~~i~l~G~SAGg~La~~~~~~~ 66 (149)
|+...|+.+.+.+-. -+.++.|+|.-- +-..+++ . +..-.-..+.|||.||.||..++.++
T Consensus 18 Gsa~~fr~W~~~lp~--~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl 95 (244)
T COG3208 18 GSASLFRSWSRRLPA--DIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFALFGHSMGAMLAFEVARRL 95 (244)
T ss_pred CCHHHHHHHHhhCCc--hhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHHHH
Confidence 556777888877654 478888998632 1222222 1 11145689999999999999999999
Q ss_pred ccCCCCCCccceEE
Q 037206 67 SFDDLNGIKLSGIY 80 (149)
Q Consensus 67 ~~~~~~~~~~~~~~ 80 (149)
...+.. |.+++
T Consensus 96 ~~~g~~---p~~lf 106 (244)
T COG3208 96 ERAGLP---PRALF 106 (244)
T ss_pred HHcCCC---cceEE
Confidence 887542 55544
No 148
>PLN02408 phospholipase A1
Probab=92.86 E-value=0.15 Score=39.59 Aligned_cols=24 Identities=17% Similarity=0.295 Sum_probs=21.1
Q ss_pred cEEEeecChhhHHHHHHHHHhccC
Q 037206 46 LVFLRGNSAGGNIVHSMAFQASFD 69 (149)
Q Consensus 46 ~i~l~G~SAGg~La~~~~~~~~~~ 69 (149)
+|.+.|||.||.||...+..+...
T Consensus 201 sI~vTGHSLGGALAtLaA~dl~~~ 224 (365)
T PLN02408 201 SLTITGHSLGAALATLTAYDIKTT 224 (365)
T ss_pred eEEEeccchHHHHHHHHHHHHHHh
Confidence 599999999999999998877654
No 149
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=92.82 E-value=0.18 Score=38.78 Aligned_cols=28 Identities=21% Similarity=0.372 Sum_probs=24.2
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCC
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDL 71 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~ 71 (149)
.-+|.+.|||.||.||...+..+...++
T Consensus 170 ~~~i~vTGHSLGgAlA~laa~~i~~~~~ 197 (336)
T KOG4569|consen 170 NYSIWVTGHSLGGALASLAALDLVKNGL 197 (336)
T ss_pred CcEEEEecCChHHHHHHHHHHHHHHcCC
Confidence 5679999999999999999988777654
No 150
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=92.60 E-value=0.32 Score=37.75 Aligned_cols=57 Identities=16% Similarity=0.102 Sum_probs=41.0
Q ss_pred chhhHHHHHHHHhhCCCEEEEEccCCCCCC-----------Cccccc-------------hh-------------cccEE
Q 037206 6 CSTYHNYVGSHSAKANVIVVSVDYRLAPEH-----------LLGKTL-------------VL-------------ILLVF 48 (149)
Q Consensus 6 ~~~~~~~~~~la~~~g~~v~~vdYrlaPe~-----------~~p~~~-------------~~-------------~~~i~ 48 (149)
-..++.++..+|+. |++|..++..-.-.. ..|..| +. +.||.
T Consensus 84 ~~~f~~~A~~lAs~-Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vg 162 (365)
T COG4188 84 VTGFAWLAEHLASY-GFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVG 162 (365)
T ss_pred ccchhhhHHHHhhC-ceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceE
Confidence 35667788889886 999999988642111 122211 11 78999
Q ss_pred EeecChhhHHHHHHH
Q 037206 49 LRGNSAGGNIVHSMA 63 (149)
Q Consensus 49 l~G~SAGg~La~~~~ 63 (149)
+.|+|-||+-++.++
T Consensus 163 v~GhS~GG~T~m~la 177 (365)
T COG4188 163 VLGHSFGGYTAMELA 177 (365)
T ss_pred EEecccccHHHHHhc
Confidence 999999999998886
No 151
>PLN02847 triacylglycerol lipase
Probab=92.56 E-value=0.21 Score=41.13 Aligned_cols=38 Identities=13% Similarity=0.181 Sum_probs=26.9
Q ss_pred ccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEecc
Q 037206 45 LLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQP 84 (149)
Q Consensus 45 ~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P 84 (149)
-+|++.|||.||.+|+.++..++... .-+.+. ++.|.|
T Consensus 251 YkLVITGHSLGGGVAALLAilLRe~~-~fssi~-CyAFgP 288 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYILREQK-EFSSTT-CVTFAP 288 (633)
T ss_pred CeEEEeccChHHHHHHHHHHHHhcCC-CCCCce-EEEecC
Confidence 48999999999999999988876531 112233 455655
No 152
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.54 E-value=0.0083 Score=41.68 Aligned_cols=44 Identities=11% Similarity=0.176 Sum_probs=33.6
Q ss_pred cchh----cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCCC
Q 037206 40 TLVL----ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGRN 89 (149)
Q Consensus 40 ~~~~----~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~ 89 (149)
+|+. |.+..+.|.|.||..|+.+..+.... ..++|.+++++|..
T Consensus 92 rYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~l------ftkvialSGvYdar 139 (227)
T COG4947 92 RYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHL------FTKVIALSGVYDAR 139 (227)
T ss_pred HHHHHhhcCCCccccccchhhhhhhhhheeChhH------hhhheeecceeeHH
Confidence 5555 88899999999999999988655442 56777788777654
No 153
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=92.47 E-value=0.51 Score=40.38 Aligned_cols=60 Identities=20% Similarity=0.203 Sum_probs=42.6
Q ss_pred hhhHHHHHHHHhhCCCEEEEEccCCCCCCCcc---------------------------c---------------cch--
Q 037206 7 STYHNYVGSHSAKANVIVVSVDYRLAPEHLLG---------------------------K---------------TLV-- 42 (149)
Q Consensus 7 ~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p---------------------------~---------------~~~-- 42 (149)
..+..+++.|+++ |+.|+.+|||.--+..+. . .++
T Consensus 463 ~~~~~lA~~La~~-Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~ 541 (792)
T TIGR03502 463 ENALAFAGTLAAA-GVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSAL 541 (792)
T ss_pred HHHHHHHHHHHhC-CcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccc
Confidence 4577888888876 999999999754333221 0 110
Q ss_pred ----------h-cccEEEeecChhhHHHHHHHHHhc
Q 037206 43 ----------L-ILLVFLRGNSAGGNIVHSMAFQAS 67 (149)
Q Consensus 43 ----------~-~~~i~l~G~SAGg~La~~~~~~~~ 67 (149)
. ..++++.|||.||.++..++....
T Consensus 542 ~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~an 577 (792)
T TIGR03502 542 AGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYAN 577 (792)
T ss_pred cccccccccCCCCCcEEEEecCHHHHHHHHHHHhcC
Confidence 0 248999999999999999987543
No 154
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=92.42 E-value=0.087 Score=43.17 Aligned_cols=132 Identities=13% Similarity=0.022 Sum_probs=80.9
Q ss_pred chhhHHHHHHHHhhCCCEEEEEccCCCCCCC---------------ccc-----cchh------cccEEEeecChhhHHH
Q 037206 6 CSTYHNYVGSHSAKANVIVVSVDYRLAPEHL---------------LGK-----TLVL------ILLVFLRGNSAGGNIV 59 (149)
Q Consensus 6 ~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~---------------~p~-----~~~~------~~~i~l~G~SAGg~La 59 (149)
++.|......+.++ |-+-+..+-|=--|.- |.+ .++. |+++.+.|.|=||-|+
T Consensus 436 tP~fs~~~~~WLer-Gg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLv 514 (648)
T COG1505 436 TPRFSGSRKLWLER-GGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLV 514 (648)
T ss_pred CCccchhhHHHHhc-CCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEE
Confidence 45566655666666 7888888888643321 111 2222 9999999999999765
Q ss_pred HHHHHHhccCCCCCCccceEEEeccccCCCCCCc----------------hHHHH-------------------------
Q 037206 60 HSMAFQASFDDLNGIKLSGIYLVQPYFGRNYGVV----------------DNCWV------------------------- 98 (149)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~~~~----------------~~~~~------------------------- 98 (149)
..... ++ +..+.++++-+|.+|+-.-.. ...+.
T Consensus 515 g~alT---Qr---PelfgA~v~evPllDMlRYh~l~aG~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs 588 (648)
T COG1505 515 GAALT---QR---PELFGAAVCEVPLLDMLRYHLLTAGSSWIAEYGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTS 588 (648)
T ss_pred Eeeec---cC---hhhhCceeeccchhhhhhhcccccchhhHhhcCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEcc
Confidence 54432 22 224677788888887643211 00000
Q ss_pred ------------HHHHHhcCCC-ceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhccc
Q 037206 99 ------------IYFENCGWAG-ETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNRDN 147 (149)
Q Consensus 99 ------------~~~~~l~~~~-~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~~~ 147 (149)
.|+.+|++.+ ++-+.+--+.+|+--- + ..+..+-...+..||.+.+
T Consensus 589 ~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~--~-~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 589 LHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAA--P-TAEIARELADLLAFLLRTL 647 (648)
T ss_pred cccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCC--C-hHHHHHHHHHHHHHHHHhh
Confidence 7888887655 8888888899996522 2 2333444556677887765
No 155
>COG4099 Predicted peptidase [General function prediction only]
Probab=92.39 E-value=0.17 Score=38.30 Aligned_cols=38 Identities=13% Similarity=-0.037 Sum_probs=30.1
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccC
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFG 87 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~ 87 (149)
.+||++.|.|.||..+..++....+. .++.+++++--|
T Consensus 268 ~sRIYviGlSrG~~gt~al~~kfPdf------FAaa~~iaG~~d 305 (387)
T COG4099 268 RSRIYVIGLSRGGFGTWALAEKFPDF------FAAAVPIAGGGD 305 (387)
T ss_pred cceEEEEeecCcchhhHHHHHhCchh------hheeeeecCCCc
Confidence 89999999999999998888655443 677777776544
No 156
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=92.06 E-value=0.92 Score=32.85 Aligned_cols=41 Identities=12% Similarity=-0.040 Sum_probs=29.3
Q ss_pred EEeecChhhHHHHHHHHHhccC--CCCCCccceEEEeccccCC
Q 037206 48 FLRGNSAGGNIVHSMAFQASFD--DLNGIKLSGIYLVQPYFGR 88 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~~~~~~--~~~~~~~~~~~l~~P~~~~ 88 (149)
.|.|+|-|+.|+..++...... ....+.++-+++++++.-.
T Consensus 107 GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~ 149 (230)
T KOG2551|consen 107 GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFP 149 (230)
T ss_pred cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCC
Confidence 5889999999999998722111 1123567888999987655
No 157
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=92.02 E-value=0.37 Score=39.82 Aligned_cols=95 Identities=16% Similarity=0.158 Sum_probs=53.9
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCCCCC----CchHHHH---------------------
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGRNYG----VVDNCWV--------------------- 98 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~~----~~~~~~~--------------------- 98 (149)
...|+|+|.|+|+.++.++...-. +..+.++|++.=.++.-.. .++.+.+
T Consensus 249 ha~IiLvGrsmGAlVachVSpsns-----dv~V~~vVCigypl~~vdgprgirDE~Lldmk~PVLFV~Gsnd~mcspn~M 323 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACHVSPSNS-----DVEVDAVVCIGYPLDTVDGPRGIRDEALLDMKQPVLFVIGSNDHMCSPNSM 323 (784)
T ss_pred CCceEEEecccCceeeEEeccccC-----CceEEEEEEecccccCCCcccCCcchhhHhcCCceEEEecCCcccCCHHHH
Confidence 678999999999766666553211 2337888876544332211 1111111
Q ss_pred -HHHHHhcCCCceEEEEeCCCCeeeeeecCC--------chhHHHHHHHHHHHHhc
Q 037206 99 -IYFENCGWAGETEIVETQGEDHVFYLFNLD--------SEEAVPLMDKLASFLNR 145 (149)
Q Consensus 99 -~~~~~l~~~~~v~~~~~~g~~H~f~~~~~~--------~~~~~~~~~~i~~fl~~ 145 (149)
.+.++++ .++++++..+++|.+-.-... ..-.....++|.+|+..
T Consensus 324 E~vreKMq--A~~elhVI~~adhsmaipk~k~esegltqseVd~~i~~aI~efvt~ 377 (784)
T KOG3253|consen 324 EEVREKMQ--AEVELHVIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEFVTI 377 (784)
T ss_pred HHHHHHhh--ccceEEEecCCCccccCCccccccccccHHHHHHHHHHHHHHHHHH
Confidence 3333333 468999999999998663211 11223345556666554
No 158
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=92.00 E-value=0.22 Score=38.76 Aligned_cols=35 Identities=17% Similarity=0.193 Sum_probs=26.9
Q ss_pred ccc-EEEeecChhhHHHHHHHHHhccCCCCCCccceEEEecc
Q 037206 44 ILL-VFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQP 84 (149)
Q Consensus 44 ~~~-i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P 84 (149)
.++ +.++|+|.||.+++.++....+ .+++++++.+
T Consensus 145 ~~~~~~lvG~S~Gg~ia~~~a~~~p~------~v~~lvl~~~ 180 (379)
T PRK00175 145 ITRLAAVVGGSMGGMQALEWAIDYPD------RVRSALVIAS 180 (379)
T ss_pred CCCceEEEEECHHHHHHHHHHHhChH------hhhEEEEECC
Confidence 667 5899999999999999876543 3666666654
No 159
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=91.95 E-value=0.32 Score=38.46 Aligned_cols=75 Identities=15% Similarity=0.181 Sum_probs=51.3
Q ss_pred hHHHHHHHHhhCCCEEEEEccCCCCCCCccc----cchh---------------cccEEEeecChhhHHHHHHHHHhccC
Q 037206 9 YHNYVGSHSAKANVIVVSVDYRLAPEHLLGK----TLVL---------------ILLVFLRGNSAGGNIVHSMAFQASFD 69 (149)
Q Consensus 9 ~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~----~~~~---------------~~~i~l~G~SAGg~La~~~~~~~~~~ 69 (149)
...+.+-+.++ |..|+.|+.+- |....-. +|+. .++|-+.|.|.||+++.+++.....+
T Consensus 128 ~~s~V~~l~~~-g~~vfvIsw~n-Pd~~~~~~~~edYi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k 205 (445)
T COG3243 128 EKSLVRWLLEQ-GLDVFVISWRN-PDASLAAKNLEDYILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAK 205 (445)
T ss_pred CccHHHHHHHc-CCceEEEeccC-chHhhhhccHHHHHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhc
Confidence 45566667666 99999999873 3322223 4442 69999999999999998888766554
Q ss_pred CCCCCccceEEEeccccCCCC
Q 037206 70 DLNGIKLSGIYLVQPYFGRNY 90 (149)
Q Consensus 70 ~~~~~~~~~~~l~~P~~~~~~ 90 (149)
+++...++.-.+|.+.
T Consensus 206 -----~I~S~T~lts~~DF~~ 221 (445)
T COG3243 206 -----RIKSLTLLTSPVDFSH 221 (445)
T ss_pred -----ccccceeeecchhhcc
Confidence 3666555555555544
No 160
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=91.91 E-value=0.55 Score=34.17 Aligned_cols=46 Identities=13% Similarity=0.222 Sum_probs=35.8
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCC---CCccceEEEeccccCCC
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLN---GIKLSGIYLVQPYFGRN 89 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~---~~~~~~~~l~~P~~~~~ 89 (149)
..+|.+++||+|+.+.+.....+...... ...+..+++..|-++..
T Consensus 92 ~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 92 IKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDND 140 (233)
T ss_pred CceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHH
Confidence 68999999999999999988776655321 13677889999977763
No 161
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=91.77 E-value=0.22 Score=40.02 Aligned_cols=47 Identities=19% Similarity=0.241 Sum_probs=36.9
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCC----CCCccceEEEeccccCCCC
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDL----NGIKLSGIYLVQPYFGRNY 90 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~----~~~~~~~~~l~~P~~~~~~ 90 (149)
..+++|+|+|.||+.+-.++..+...+. ....++|+++-.|++|...
T Consensus 170 ~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~ 220 (462)
T PTZ00472 170 ANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDPYT 220 (462)
T ss_pred CCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccChhh
Confidence 4789999999999999999887754321 1256899999999988753
No 162
>PLN02802 triacylglycerol lipase
Probab=91.73 E-value=0.24 Score=40.02 Aligned_cols=24 Identities=17% Similarity=0.149 Sum_probs=21.0
Q ss_pred cEEEeecChhhHHHHHHHHHhccC
Q 037206 46 LVFLRGNSAGGNIVHSMAFQASFD 69 (149)
Q Consensus 46 ~i~l~G~SAGg~La~~~~~~~~~~ 69 (149)
+|++.|||.||.||...+..+...
T Consensus 331 sI~VTGHSLGGALAtLaA~dL~~~ 354 (509)
T PLN02802 331 SITVTGHSLGAALALLVADELATC 354 (509)
T ss_pred eEEEeccchHHHHHHHHHHHHHHh
Confidence 699999999999999998877654
No 163
>PLN02571 triacylglycerol lipase
Probab=91.35 E-value=0.31 Score=38.53 Aligned_cols=24 Identities=17% Similarity=0.207 Sum_probs=20.6
Q ss_pred cEEEeecChhhHHHHHHHHHhccC
Q 037206 46 LVFLRGNSAGGNIVHSMAFQASFD 69 (149)
Q Consensus 46 ~i~l~G~SAGg~La~~~~~~~~~~ 69 (149)
+|++.|||.||.||...+..+...
T Consensus 227 sI~VTGHSLGGALAtLaA~dl~~~ 250 (413)
T PLN02571 227 SITICGHSLGAALATLNAVDIVAN 250 (413)
T ss_pred cEEEeccchHHHHHHHHHHHHHHh
Confidence 699999999999999988876543
No 164
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=91.09 E-value=1.3 Score=33.26 Aligned_cols=62 Identities=23% Similarity=0.242 Sum_probs=37.4
Q ss_pred CCEEEEEccC--------CCCCCCccc------------cchhcccEEEeecChhhHHHHHHHHHhccCCCCCCccceEE
Q 037206 21 NVIVVSVDYR--------LAPEHLLGK------------TLVLILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIY 80 (149)
Q Consensus 21 g~~v~~vdYr--------laPe~~~p~------------~~~~~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~ 80 (149)
.+.|+.||-+ +....+||+ .++.-+.++-+|--|||++-+.++....+ ++.|+|
T Consensus 55 ~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~------~V~GLi 128 (283)
T PF03096_consen 55 NFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPE------RVLGLI 128 (283)
T ss_dssp TSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGG------GEEEEE
T ss_pred ceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCcc------ceeEEE
Confidence 6899999987 233457887 22228889999999999999888876554 489999
Q ss_pred EeccccCC
Q 037206 81 LVQPYFGR 88 (149)
Q Consensus 81 l~~P~~~~ 88 (149)
|++|....
T Consensus 129 Lvn~~~~~ 136 (283)
T PF03096_consen 129 LVNPTCTA 136 (283)
T ss_dssp EES---S-
T ss_pred EEecCCCC
Confidence 99986543
No 165
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=91.08 E-value=0.34 Score=37.75 Aligned_cols=46 Identities=22% Similarity=0.313 Sum_probs=36.6
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCC----CCccceEEEeccccCCC
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLN----GIKLSGIYLVQPYFGRN 89 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~----~~~~~~~~l~~P~~~~~ 89 (149)
.+.++|.|+|-||+-+-.++..+.+.... ...++|+++..|+++..
T Consensus 135 ~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp~ 184 (415)
T PF00450_consen 135 SNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDPR 184 (415)
T ss_dssp TSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBHH
T ss_pred CCCEEEEccccccccchhhHHhhhhccccccccccccccceecCcccccc
Confidence 56899999999999998888776554321 46789999999998874
No 166
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=90.98 E-value=0.54 Score=39.06 Aligned_cols=39 Identities=21% Similarity=0.241 Sum_probs=28.5
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCC
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGR 88 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~ 88 (149)
++++.+.|.||||-|+.+......+ ...++++--|++|.
T Consensus 548 ~~kL~i~G~SaGGlLvga~iN~rPd------LF~avia~VpfmDv 586 (712)
T KOG2237|consen 548 PSKLAIEGGSAGGLLVGACINQRPD------LFGAVIAKVPFMDV 586 (712)
T ss_pred ccceeEecccCccchhHHHhccCch------HhhhhhhcCcceeh
Confidence 9999999999999988877643222 35666666666664
No 167
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=90.97 E-value=1.4 Score=30.23 Aligned_cols=74 Identities=20% Similarity=0.177 Sum_probs=46.9
Q ss_pred CchhhHHHHHHHHhhCCCEEEEEccCCC-CCCCccc----------cchh----cccEEEeecChhhHHHHHHHHHhccC
Q 037206 5 FCSTYHNYVGSHSAKANVIVVSVDYRLA-PEHLLGK----------TLVL----ILLVFLRGNSAGGNIVHSMAFQASFD 69 (149)
Q Consensus 5 ~~~~~~~~~~~la~~~g~~v~~vdYrla-Pe~~~p~----------~~~~----~~~i~l~G~SAGg~La~~~~~~~~~~ 69 (149)
....|..+...+.. ...|+.++++-. ...+.+. ..+. ..++.+.|+|.||.++..++..+...
T Consensus 11 ~~~~~~~~~~~l~~--~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~ 88 (212)
T smart00824 11 GPHEYARLAAALRG--RRDVSALPLPGFGPGEPLPASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEAR 88 (212)
T ss_pred cHHHHHHHHHhcCC--CccEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhC
Confidence 44567778888865 467888877532 1222222 1111 45789999999999999998877654
Q ss_pred CCCCCccceEEEec
Q 037206 70 DLNGIKLSGIYLVQ 83 (149)
Q Consensus 70 ~~~~~~~~~~~l~~ 83 (149)
+ ..+.+++++.
T Consensus 89 ~---~~~~~l~~~~ 99 (212)
T smart00824 89 G---IPPAAVVLLD 99 (212)
T ss_pred C---CCCcEEEEEc
Confidence 2 2355555553
No 168
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=90.91 E-value=0.33 Score=33.72 Aligned_cols=59 Identities=24% Similarity=0.306 Sum_probs=40.7
Q ss_pred CEEEEEccCCCCCCC---ccc--------cchh---cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEecccc
Q 037206 22 VIVVSVDYRLAPEHL---LGK--------TLVL---ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYF 86 (149)
Q Consensus 22 ~~v~~vdYrlaPe~~---~p~--------~~~~---~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~ 86 (149)
+.|+.+|.|-.-... +.. .++. ..++.+.|+|.||.+++.++....+ .+.+++++.+..
T Consensus 51 ~~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~------~~~~~v~~~~~~ 123 (282)
T COG0596 51 YRVIAPDLRGHGRSDPAGYSLSAYADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPD------RVRGLVLIGPAP 123 (282)
T ss_pred eEEEEecccCCCCCCcccccHHHHHHHHHHHHHHhCCCceEEEEecccHHHHHHHHHhcch------hhheeeEecCCC
Confidence 899999999433332 111 2222 5669999999999999999876554 367777777553
No 169
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=90.90 E-value=0.5 Score=32.96 Aligned_cols=71 Identities=20% Similarity=0.246 Sum_probs=40.2
Q ss_pred HHHHHHhhCC---CEEEEEccCCCCCC-Cccc----------cch----h---cccEEEeecChhhHHHHHHHHH--hcc
Q 037206 12 YVGSHSAKAN---VIVVSVDYRLAPEH-LLGK----------TLV----L---ILLVFLRGNSAGGNIVHSMAFQ--ASF 68 (149)
Q Consensus 12 ~~~~la~~~g---~~v~~vdYrlaPe~-~~p~----------~~~----~---~~~i~l~G~SAGg~La~~~~~~--~~~ 68 (149)
+...+.+..| +.+..|+|.=.... .|.. +.+ . ..+|+|+|.|-||.++..++.. +..
T Consensus 27 ~~~~l~~~~g~~~~~~~~V~YpA~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~ 106 (179)
T PF01083_consen 27 FADALQAQPGGTSVAVQGVEYPASLGPNSYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPP 106 (179)
T ss_dssp HHHHHHHHCTTCEEEEEE--S---SCGGSCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSH
T ss_pred HHHHHHhhcCCCeeEEEecCCCCCCCcccccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCCh
Confidence 3444555555 45666778755444 3433 222 2 5589999999999999988766 111
Q ss_pred CCCCCCccceEEEecc
Q 037206 69 DDLNGIKLSGIYLVQP 84 (149)
Q Consensus 69 ~~~~~~~~~~~~l~~P 84 (149)
. ...++.+++++.-
T Consensus 107 ~--~~~~I~avvlfGd 120 (179)
T PF01083_consen 107 D--VADRIAAVVLFGD 120 (179)
T ss_dssp H--HHHHEEEEEEES-
T ss_pred h--hhhhEEEEEEecC
Confidence 1 1245788887763
No 170
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=90.86 E-value=3.6 Score=31.28 Aligned_cols=92 Identities=12% Similarity=0.067 Sum_probs=56.3
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCCCCCCc-------------------hHHHH-HHHH-
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGRNYGVV-------------------DNCWV-IYFE- 102 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~~~~-------------------~~~~~-~~~~- 102 (149)
..+|+|+|++.|+.+++.+..... .+.+.++|+++|.......+. +..|. ..++
T Consensus 192 ~~~ivlIg~G~gA~~~~~~la~~~-----~~~~daLV~I~a~~p~~~~n~~l~~~la~l~iPvLDi~~~~~~~~~~~a~~ 266 (310)
T PF12048_consen 192 GKNIVLIGHGTGAGWAARYLAEKP-----PPMPDALVLINAYWPQPDRNPALAEQLAQLKIPVLDIYSADNPASQQTAKQ 266 (310)
T ss_pred CceEEEEEeChhHHHHHHHHhcCC-----CcccCeEEEEeCCCCcchhhhhHHHHhhccCCCEEEEecCCChHHHHHHHH
Confidence 445999999999999888875432 234789999998755443311 10111 1111
Q ss_pred ---Hh-cCC-CceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhcc
Q 037206 103 ---NC-GWA-GETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNRD 146 (149)
Q Consensus 103 ---~l-~~~-~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~~ 146 (149)
.. ++. ...+-....+..|.+. ......+++|..|++++
T Consensus 267 R~~~a~r~~~~~YrQ~~L~~~~~~~~------~~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 267 RKQAAKRNKKPDYRQIQLPGLPDNPS------GWQEQLLRRIRGWLKRH 309 (310)
T ss_pred HHHHHHhccCCCceeEecCCCCCChh------hHHHHHHHHHHHHHHhh
Confidence 11 122 2566667777777442 23344999999999875
No 171
>PLN00413 triacylglycerol lipase
Probab=90.49 E-value=0.26 Score=39.53 Aligned_cols=24 Identities=21% Similarity=0.221 Sum_probs=20.3
Q ss_pred cccEEEeecChhhHHHHHHHHHhc
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQAS 67 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~ 67 (149)
..+|++.|||.||.||...+..+.
T Consensus 283 ~~kliVTGHSLGGALAtLaA~~L~ 306 (479)
T PLN00413 283 TSKFILSGHSLGGALAILFTAVLI 306 (479)
T ss_pred CCeEEEEecCHHHHHHHHHHHHHH
Confidence 468999999999999998886543
No 172
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=90.44 E-value=0.58 Score=32.65 Aligned_cols=42 Identities=24% Similarity=0.152 Sum_probs=33.1
Q ss_pred ccchh---------cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEecccc
Q 037206 39 KTLVL---------ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYF 86 (149)
Q Consensus 39 ~~~~~---------~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~ 86 (149)
++|+. ++.+++++||-|.-+++..+.+... +++|.+|+.|.-
T Consensus 44 ~dWi~~l~~~v~a~~~~~vlVAHSLGc~~v~h~~~~~~~------~V~GalLVAppd 94 (181)
T COG3545 44 DDWIARLEKEVNAAEGPVVLVAHSLGCATVAHWAEHIQR------QVAGALLVAPPD 94 (181)
T ss_pred HHHHHHHHHHHhccCCCeEEEEecccHHHHHHHHHhhhh------ccceEEEecCCC
Confidence 37876 5559999999999888877765443 589999999864
No 173
>PLN03037 lipase class 3 family protein; Provisional
Probab=90.08 E-value=0.48 Score=38.43 Aligned_cols=23 Identities=26% Similarity=0.407 Sum_probs=19.8
Q ss_pred cEEEeecChhhHHHHHHHHHhcc
Q 037206 46 LVFLRGNSAGGNIVHSMAFQASF 68 (149)
Q Consensus 46 ~i~l~G~SAGg~La~~~~~~~~~ 68 (149)
+|.+.|||.||.||...+..+..
T Consensus 319 SItVTGHSLGGALAtLaA~DIa~ 341 (525)
T PLN03037 319 SLTITGHSLGGALALLNAYEAAR 341 (525)
T ss_pred eEEEeccCHHHHHHHHHHHHHHH
Confidence 69999999999999988866544
No 174
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=89.68 E-value=0.32 Score=34.87 Aligned_cols=47 Identities=17% Similarity=0.051 Sum_probs=34.0
Q ss_pred CCEEEEEccCCCCCCCcc-c---------------------cchh----cccEEEeecChhhHHHHHHHHHhc
Q 037206 21 NVIVVSVDYRLAPEHLLG-K---------------------TLVL----ILLVFLRGNSAGGNIVHSMAFQAS 67 (149)
Q Consensus 21 g~~v~~vdYrlaPe~~~p-~---------------------~~~~----~~~i~l~G~SAGg~La~~~~~~~~ 67 (149)
-+.|+++-||.+--..+- . .|+. ..-|+|+|||-|+.+...|.....
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~~ 117 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEEI 117 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHHh
Confidence 578999999976433332 1 3333 557999999999999888876543
No 175
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=89.58 E-value=0.4 Score=37.62 Aligned_cols=33 Identities=21% Similarity=0.202 Sum_probs=25.3
Q ss_pred cccEE-EeecChhhHHHHHHHHHhccCCCCCCccceEEEe
Q 037206 44 ILLVF-LRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLV 82 (149)
Q Consensus 44 ~~~i~-l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~ 82 (149)
-+++. ++|+|.||.+++.++....+. ++.++++
T Consensus 159 i~~~~~vvG~SmGG~ial~~a~~~P~~------v~~lv~i 192 (389)
T PRK06765 159 IARLHAVMGPSMGGMQAQEWAVHYPHM------VERMIGV 192 (389)
T ss_pred CCCceEEEEECHHHHHHHHHHHHChHh------hheEEEE
Confidence 66775 999999999999999876543 5555555
No 176
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=89.49 E-value=0.84 Score=33.80 Aligned_cols=45 Identities=22% Similarity=0.079 Sum_probs=29.9
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCCC
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGRN 89 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~ 89 (149)
.+++-++|||+||..+...+....... .-|.+..++.+...++..
T Consensus 102 ~~~~N~VGHSmGg~~~~~yl~~~~~~~-~~P~l~K~V~Ia~pfng~ 146 (255)
T PF06028_consen 102 FKKFNLVGHSMGGLSWTYYLENYGNDK-NLPKLNKLVTIAGPFNGI 146 (255)
T ss_dssp -SEEEEEEETHHHHHHHHHHHHCTTGT-TS-EEEEEEEES--TTTT
T ss_pred CCEEeEEEECccHHHHHHHHHHhccCC-CCcccceEEEeccccCcc
Confidence 899999999999988877766544331 234678888877666553
No 177
>PLN02753 triacylglycerol lipase
Probab=89.39 E-value=0.57 Score=38.08 Aligned_cols=25 Identities=24% Similarity=0.336 Sum_probs=21.4
Q ss_pred ccEEEeecChhhHHHHHHHHHhccC
Q 037206 45 LLVFLRGNSAGGNIVHSMAFQASFD 69 (149)
Q Consensus 45 ~~i~l~G~SAGg~La~~~~~~~~~~ 69 (149)
-+|.+.|||.||.||...+..+...
T Consensus 312 ~sItVTGHSLGGALAtLaA~Dla~~ 336 (531)
T PLN02753 312 LSITVTGHSLGGALAILSAYDIAEM 336 (531)
T ss_pred ceEEEEccCHHHHHHHHHHHHHHHh
Confidence 4899999999999999998776543
No 178
>PLN02310 triacylglycerol lipase
Probab=89.21 E-value=0.6 Score=36.85 Aligned_cols=24 Identities=25% Similarity=0.415 Sum_probs=20.2
Q ss_pred ccEEEeecChhhHHHHHHHHHhcc
Q 037206 45 LLVFLRGNSAGGNIVHSMAFQASF 68 (149)
Q Consensus 45 ~~i~l~G~SAGg~La~~~~~~~~~ 68 (149)
.+|.+.|||.||.||...+..+..
T Consensus 209 ~sI~vTGHSLGGALAtLaA~dl~~ 232 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYEAAT 232 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHHHHH
Confidence 479999999999999988876543
No 179
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=88.87 E-value=0.47 Score=35.24 Aligned_cols=23 Identities=22% Similarity=0.117 Sum_probs=20.3
Q ss_pred cccEEEeecChhhHHHHHHHHHh
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQA 66 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~ 66 (149)
.++..++|+|-||.+++...+..
T Consensus 136 ~~~~~i~GhSlGGLfvl~aLL~~ 158 (264)
T COG2819 136 SERTAIIGHSLGGLFVLFALLTY 158 (264)
T ss_pred cccceeeeecchhHHHHHHHhcC
Confidence 78899999999999999887654
No 180
>PLN02719 triacylglycerol lipase
Probab=88.65 E-value=0.66 Score=37.62 Aligned_cols=24 Identities=21% Similarity=0.310 Sum_probs=21.0
Q ss_pred cEEEeecChhhHHHHHHHHHhccC
Q 037206 46 LVFLRGNSAGGNIVHSMAFQASFD 69 (149)
Q Consensus 46 ~i~l~G~SAGg~La~~~~~~~~~~ 69 (149)
+|.+.|||.||.||...+..+...
T Consensus 299 sItVTGHSLGGALAtLaA~Dl~~~ 322 (518)
T PLN02719 299 SITVTGHSLGGALAVLSAYDVAEM 322 (518)
T ss_pred eEEEecCcHHHHHHHHHHHHHHHh
Confidence 799999999999999998776543
No 181
>PLN02324 triacylglycerol lipase
Probab=88.63 E-value=0.41 Score=37.82 Aligned_cols=23 Identities=17% Similarity=0.208 Sum_probs=19.9
Q ss_pred cEEEeecChhhHHHHHHHHHhcc
Q 037206 46 LVFLRGNSAGGNIVHSMAFQASF 68 (149)
Q Consensus 46 ~i~l~G~SAGg~La~~~~~~~~~ 68 (149)
+|.+.|||.||.||...+..+..
T Consensus 216 sItvTGHSLGGALAtLaA~dl~~ 238 (415)
T PLN02324 216 SITFTGHSLGAVMSVLSAADLVY 238 (415)
T ss_pred eEEEecCcHHHHHHHHHHHHHHH
Confidence 69999999999999999876543
No 182
>PLN02162 triacylglycerol lipase
Probab=88.53 E-value=0.44 Score=38.20 Aligned_cols=24 Identities=25% Similarity=0.308 Sum_probs=19.9
Q ss_pred cccEEEeecChhhHHHHHHHHHhc
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQAS 67 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~ 67 (149)
..+|++.|||-||.||...+..+.
T Consensus 277 ~~kliVTGHSLGGALAtLaAa~L~ 300 (475)
T PLN02162 277 NLKYILTGHSLGGALAALFPAILA 300 (475)
T ss_pred CceEEEEecChHHHHHHHHHHHHH
Confidence 458999999999999988876543
No 183
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=88.38 E-value=0.51 Score=40.20 Aligned_cols=23 Identities=26% Similarity=0.268 Sum_probs=19.2
Q ss_pred cccEEEeecChhhHHHHHHHHHh
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQA 66 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~ 66 (149)
|..|++.|||+||-+|.+++..-
T Consensus 181 P~sVILVGHSMGGiVAra~~tlk 203 (973)
T KOG3724|consen 181 PHSVILVGHSMGGIVARATLTLK 203 (973)
T ss_pred CceEEEEeccchhHHHHHHHhhh
Confidence 77899999999998888776543
No 184
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=87.96 E-value=0.27 Score=40.61 Aligned_cols=78 Identities=9% Similarity=-0.031 Sum_probs=47.6
Q ss_pred HHHHHHHHhhCCCE-----EEEEccCCCCCCCccc-cchh--------------cccEEEeecChhhHHHHHHHHHhccC
Q 037206 10 HNYVGSHSAKANVI-----VVSVDYRLAPEHLLGK-TLVL--------------ILLVFLRGNSAGGNIVHSMAFQASFD 69 (149)
Q Consensus 10 ~~~~~~la~~~g~~-----v~~vdYrlaPe~~~p~-~~~~--------------~~~i~l~G~SAGg~La~~~~~~~~~~ 69 (149)
..+...|++. ||. ...-|+|++|...--. +|.. ..+++|.|||.||.+++.+.......
T Consensus 159 ~kLIe~L~~i-GY~~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~ 237 (642)
T PLN02517 159 AVLIANLARI-GYEEKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAP 237 (642)
T ss_pred HHHHHHHHHc-CCCCCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhcccc
Confidence 4677777753 553 4446788886443211 2211 47999999999999999887654311
Q ss_pred ---------CCCCCccceEEEeccccCC
Q 037206 70 ---------DLNGIKLSGIYLVQPYFGR 88 (149)
Q Consensus 70 ---------~~~~~~~~~~~l~~P~~~~ 88 (149)
+.....|+..|.++|.+..
T Consensus 238 ~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 238 APMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred ccccCCcchHHHHHHHHHheecccccCC
Confidence 0011346777777765443
No 185
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=87.82 E-value=1 Score=32.61 Aligned_cols=60 Identities=17% Similarity=0.119 Sum_probs=37.7
Q ss_pred CchhhHHHHHHHHhhCCCE---EEEEccCCCCCCCccc-------------cchh-------cccEEEeecChhhHHHHH
Q 037206 5 FCSTYHNYVGSHSAKANVI---VVSVDYRLAPEHLLGK-------------TLVL-------ILLVFLRGNSAGGNIVHS 61 (149)
Q Consensus 5 ~~~~~~~~~~~la~~~g~~---v~~vdYrlaPe~~~p~-------------~~~~-------~~~i~l~G~SAGg~La~~ 61 (149)
.......+...|.++ |+. |+..+|--.+..+... +|+. . +|=|+|||.||.++-.
T Consensus 14 ~~~~w~~~~~~l~~~-GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~ 91 (219)
T PF01674_consen 14 AYSNWSTLAPYLKAA-GYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIVGHSMGGTIARY 91 (219)
T ss_dssp TCGGCCHHHHHHHHT-T--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEEEETCHHHHHHH
T ss_pred hhhCHHHHHHHHHHc-CCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHH
Confidence 345566778888876 988 8999997665533322 3333 6 9999999999998888
Q ss_pred HHHHh
Q 037206 62 MAFQA 66 (149)
Q Consensus 62 ~~~~~ 66 (149)
...-.
T Consensus 92 yi~~~ 96 (219)
T PF01674_consen 92 YIKGG 96 (219)
T ss_dssp HHHHC
T ss_pred HHHHc
Confidence 87543
No 186
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=87.18 E-value=0.79 Score=27.46 Aligned_cols=24 Identities=17% Similarity=0.146 Sum_probs=21.4
Q ss_pred hhhHHHHHHHHhhCCCEEEEEccCC
Q 037206 7 STYHNYVGSHSAKANVIVVSVDYRL 31 (149)
Q Consensus 7 ~~~~~~~~~la~~~g~~v~~vdYrl 31 (149)
..|..+++.|+++ |+.|+..|+|=
T Consensus 30 ~ry~~~a~~L~~~-G~~V~~~D~rG 53 (79)
T PF12146_consen 30 GRYAHLAEFLAEQ-GYAVFAYDHRG 53 (79)
T ss_pred HHHHHHHHHHHhC-CCEEEEECCCc
Confidence 5688999999987 99999999993
No 187
>PLN02761 lipase class 3 family protein
Probab=87.02 E-value=0.9 Score=36.96 Aligned_cols=24 Identities=17% Similarity=0.326 Sum_probs=20.5
Q ss_pred ccEEEeecChhhHHHHHHHHHhcc
Q 037206 45 LLVFLRGNSAGGNIVHSMAFQASF 68 (149)
Q Consensus 45 ~~i~l~G~SAGg~La~~~~~~~~~ 68 (149)
.+|.+.|||.||.||...+..+..
T Consensus 294 ~sItVTGHSLGGALAtLaA~DIa~ 317 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYDIAE 317 (527)
T ss_pred ceEEEeccchHHHHHHHHHHHHHH
Confidence 369999999999999998876644
No 188
>PLN02934 triacylglycerol lipase
Probab=86.99 E-value=0.57 Score=37.96 Aligned_cols=24 Identities=17% Similarity=0.169 Sum_probs=20.3
Q ss_pred cccEEEeecChhhHHHHHHHHHhc
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQAS 67 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~ 67 (149)
..+|++.|||-||.||...+..+.
T Consensus 320 ~~kIvVTGHSLGGALAtLaA~~L~ 343 (515)
T PLN02934 320 NAKFVVTGHSLGGALAILFPTVLV 343 (515)
T ss_pred CCeEEEeccccHHHHHHHHHHHHH
Confidence 458999999999999998886543
No 189
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.94 E-value=2.1 Score=33.34 Aligned_cols=45 Identities=16% Similarity=0.194 Sum_probs=36.1
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCC--CCccceEEEeccccCC
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLN--GIKLSGIYLVQPYFGR 88 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~--~~~~~~~~l~~P~~~~ 88 (149)
..+|.|+.||+|..|++..+..+..++.. ..+++-+|+..|=.|.
T Consensus 190 ~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 190 VKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred CceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 78899999999999999999887665332 2467888999997664
No 190
>PF03283 PAE: Pectinacetylesterase
Probab=84.50 E-value=1.2 Score=34.62 Aligned_cols=44 Identities=23% Similarity=0.107 Sum_probs=27.5
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCC-CCccceEEEeccccCC
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLN-GIKLSGIYLVQPYFGR 88 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~-~~~~~~~~l~~P~~~~ 88 (149)
+++|+|.|.||||.=++.-+-..++. ++ ..+++++..-..++|.
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~-lp~~~~v~~~~DsG~f~d~ 199 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDR-LPSSVKVKCLSDSGFFLDN 199 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHH-hccCceEEEeccccccccc
Confidence 89999999999997666666555443 22 2344444444344444
No 191
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=83.46 E-value=5.1 Score=30.44 Aligned_cols=59 Identities=22% Similarity=0.152 Sum_probs=44.3
Q ss_pred CEEEEEccC-------CCCC-CCccc------------cchhcccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEE
Q 037206 22 VIVVSVDYR-------LAPE-HLLGK------------TLVLILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYL 81 (149)
Q Consensus 22 ~~v~~vdYr-------laPe-~~~p~------------~~~~~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l 81 (149)
+.|+.||=. --|+ .+||+ +++.-+.|+-+|--|||++-+.+++...+ ++-|+||
T Consensus 79 fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~------rV~GLvL 152 (326)
T KOG2931|consen 79 FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPE------RVLGLVL 152 (326)
T ss_pred eEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChh------heeEEEE
Confidence 788888765 2243 48888 22228889999999999998888876554 4889999
Q ss_pred ecccc
Q 037206 82 VQPYF 86 (149)
Q Consensus 82 ~~P~~ 86 (149)
+++.-
T Consensus 153 In~~~ 157 (326)
T KOG2931|consen 153 INCDP 157 (326)
T ss_pred EecCC
Confidence 99753
No 192
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=83.42 E-value=4.8 Score=36.20 Aligned_cols=72 Identities=13% Similarity=0.109 Sum_probs=45.1
Q ss_pred chhhHHHHHHHHhhCCCEEEEEccCCCCCCCcc--c----------cchh---c-ccEEEeecChhhHHHHHHHHHhccC
Q 037206 6 CSTYHNYVGSHSAKANVIVVSVDYRLAPEHLLG--K----------TLVL---I-LLVFLRGNSAGGNIVHSMAFQASFD 69 (149)
Q Consensus 6 ~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p--~----------~~~~---~-~~i~l~G~SAGg~La~~~~~~~~~~ 69 (149)
...|..+++.+.. ++.|+.++.+-- +.+-+ . ..+. + .++.+.|+|.||.++..++..+...
T Consensus 1081 ~~~~~~l~~~l~~--~~~v~~~~~~g~-~~~~~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~ 1157 (1296)
T PRK10252 1081 AWQFSVLSRYLDP--QWSIYGIQSPRP-DGPMQTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLGGTLAQGIAARLRAR 1157 (1296)
T ss_pred hHHHHHHHHhcCC--CCcEEEEECCCC-CCCCCCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechhhHHHHHHHHHHHHc
Confidence 3456667776643 578888887643 21111 1 1121 3 4799999999999999999877554
Q ss_pred CCCCCccceEEEec
Q 037206 70 DLNGIKLSGIYLVQ 83 (149)
Q Consensus 70 ~~~~~~~~~~~l~~ 83 (149)
...+..++++.
T Consensus 1158 ---~~~v~~l~l~~ 1168 (1296)
T PRK10252 1158 ---GEEVAFLGLLD 1168 (1296)
T ss_pred ---CCceeEEEEec
Confidence 12355555544
No 193
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=82.44 E-value=2.5 Score=32.97 Aligned_cols=60 Identities=15% Similarity=0.046 Sum_probs=41.9
Q ss_pred hCCCEEEEEccCC---CCCCCccc----------cchh------cccEEEeecChhhHHHHHHHHHhccCCCCCCccceE
Q 037206 19 KANVIVVSVDYRL---APEHLLGK----------TLVL------ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGI 79 (149)
Q Consensus 19 ~~g~~v~~vdYrl---aPe~~~p~----------~~~~------~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~ 79 (149)
++|+.|+.-+..- +-..|||. +|.. +++|++.|.|-||--++.++... +.++++
T Consensus 266 ~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~Y-------PdVkav 338 (517)
T KOG1553|consen 266 QLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNY-------PDVKAV 338 (517)
T ss_pred HhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcC-------CCceEE
Confidence 3588887765542 34567776 4444 99999999999999888877543 346777
Q ss_pred EEeccc
Q 037206 80 YLVQPY 85 (149)
Q Consensus 80 ~l~~P~ 85 (149)
+|-..+
T Consensus 339 vLDAtF 344 (517)
T KOG1553|consen 339 VLDATF 344 (517)
T ss_pred Eeecch
Confidence 765543
No 194
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=81.44 E-value=8.4 Score=27.94 Aligned_cols=25 Identities=16% Similarity=0.045 Sum_probs=21.9
Q ss_pred cccEEEeecChhhHHHHHHHHHhcc
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASF 68 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~ 68 (149)
.++++|+|.|.|+.++.....++..
T Consensus 47 ~~~vvV~GySQGA~Va~~~~~~l~~ 71 (225)
T PF08237_consen 47 GGPVVVFGYSQGAVVASNVLRRLAA 71 (225)
T ss_pred CCCEEEEEECHHHHHHHHHHHHHHh
Confidence 6899999999999999888877655
No 195
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=80.65 E-value=2.7 Score=34.62 Aligned_cols=68 Identities=22% Similarity=0.026 Sum_probs=48.8
Q ss_pred HHHhhCCCEEEEEccCCC--------CCCCccc-------cchh-----cccEEEeecChhhHHHHHHHHHhccCCCCCC
Q 037206 15 SHSAKANVIVVSVDYRLA--------PEHLLGK-------TLVL-----ILLVFLRGNSAGGNIVHSMAFQASFDDLNGI 74 (149)
Q Consensus 15 ~la~~~g~~v~~vdYrla--------Pe~~~p~-------~~~~-----~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~ 74 (149)
.+|.+ ||+||.+|-|=. |+.+=++ .|+. ..+|..+|-|-+|.-.+.++.. ..+
T Consensus 75 ~~aa~-GYavV~qDvRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~------~pP 147 (563)
T COG2936 75 WFAAQ-GYAVVNQDVRGRGGSEGVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAAL------QPP 147 (563)
T ss_pred eeecC-ceEEEEecccccccCCcccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhc------CCc
Confidence 45665 999999999843 3333111 8887 8999999999999987777642 235
Q ss_pred ccceEEEeccccCCC
Q 037206 75 KLSGIYLVQPYFGRN 89 (149)
Q Consensus 75 ~~~~~~l~~P~~~~~ 89 (149)
.+++++...+..|..
T Consensus 148 aLkai~p~~~~~D~y 162 (563)
T COG2936 148 ALKAIAPTEGLVDRY 162 (563)
T ss_pred hheeecccccccccc
Confidence 678887777766653
No 196
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=80.21 E-value=1.5 Score=35.13 Aligned_cols=58 Identities=17% Similarity=0.114 Sum_probs=38.1
Q ss_pred HHHHHHHHhhCCCE----EEE--EccCCCCCCCccc-cchh--------------cccEEEeecChhhHHHHHHHHHhcc
Q 037206 10 HNYVGSHSAKANVI----VVS--VDYRLAPEHLLGK-TLVL--------------ILLVFLRGNSAGGNIVHSMAFQASF 68 (149)
Q Consensus 10 ~~~~~~la~~~g~~----v~~--vdYrlaPe~~~p~-~~~~--------------~~~i~l~G~SAGg~La~~~~~~~~~ 68 (149)
+.+.+.++. .|+. +++ -|.||++..+=-. +++. ..+|+|.+||+|+.+.+.+......
T Consensus 127 ~~~i~~lv~-~GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~ 205 (473)
T KOG2369|consen 127 HELIENLVG-IGYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEA 205 (473)
T ss_pred HHHHHHHHh-hCcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccc
Confidence 344555554 4554 555 5668876332222 3332 5899999999999999999876655
No 197
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=80.17 E-value=1.9 Score=34.45 Aligned_cols=47 Identities=23% Similarity=0.288 Sum_probs=36.5
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCC----CCCCccceEEEeccccCCCC
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDD----LNGIKLSGIYLVQPYFGRNY 90 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~----~~~~~~~~~~l~~P~~~~~~ 90 (149)
.+.+++.|+|-||+-+-.++....+.+ .....++|+++-.|+++...
T Consensus 164 ~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~ 214 (433)
T PLN03016 164 SNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDF 214 (433)
T ss_pred CCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchh
Confidence 678999999999998888887765432 12357899999999987753
No 198
>PLN02209 serine carboxypeptidase
Probab=79.07 E-value=1.9 Score=34.43 Aligned_cols=47 Identities=23% Similarity=0.288 Sum_probs=36.0
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCC----CCCCccceEEEeccccCCCC
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDD----LNGIKLSGIYLVQPYFGRNY 90 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~----~~~~~~~~~~l~~P~~~~~~ 90 (149)
.+.++++|+|-||+-+-.++....+.+ -....++|+++..|++|...
T Consensus 166 ~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~ 216 (437)
T PLN02209 166 SNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEF 216 (437)
T ss_pred CCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhh
Confidence 568999999999998888887665432 12356889999999988643
No 199
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=78.50 E-value=3.2 Score=32.82 Aligned_cols=25 Identities=28% Similarity=0.320 Sum_probs=20.8
Q ss_pred chhhHHHHHHHHhhCCCEEEEEccC
Q 037206 6 CSTYHNYVGSHSAKANVIVVSVDYR 30 (149)
Q Consensus 6 ~~~~~~~~~~la~~~g~~v~~vdYr 30 (149)
...++.++..+|++.+++|++|+|-
T Consensus 50 ~~~~d~~r~~iA~~fnvv~I~V~YH 74 (403)
T PF11144_consen 50 SNYLDFMREYIAKKFNVVVISVNYH 74 (403)
T ss_pred hHHHHHHHHHHHHhCCEEEEEeeee
Confidence 3556778888999999999999994
No 200
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=77.66 E-value=3.3 Score=31.57 Aligned_cols=47 Identities=23% Similarity=0.308 Sum_probs=36.6
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCC----CCCccceEEEeccccCCCC
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDL----NGIKLSGIYLVQPYFGRNY 90 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~----~~~~~~~~~l~~P~~~~~~ 90 (149)
.+.++|.|+|-||+-+-.++....+.+. ....++|+++-.|+++...
T Consensus 50 ~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~~~ 100 (319)
T PLN02213 50 SNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDF 100 (319)
T ss_pred cCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCCccc
Confidence 6789999999999988888877654321 2357899999999988754
No 201
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=76.87 E-value=6.2 Score=31.50 Aligned_cols=56 Identities=18% Similarity=0.215 Sum_probs=41.6
Q ss_pred hHHHHHHHHhhCCCEEEEEccCCCCC-CCccc-------------------------cchh------cccEEEeecChhh
Q 037206 9 YHNYVGSHSAKANVIVVSVDYRLAPE-HLLGK-------------------------TLVL------ILLVFLRGNSAGG 56 (149)
Q Consensus 9 ~~~~~~~la~~~g~~v~~vdYrlaPe-~~~p~-------------------------~~~~------~~~i~l~G~SAGg 56 (149)
...+...+|.+.+..+|.++.|-.-| -||-. ++++ ...|++.|.|-||
T Consensus 99 ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGG 178 (492)
T KOG2183|consen 99 NTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGG 178 (492)
T ss_pred ccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhh
Confidence 34577788999999999999998754 24433 1122 6779999999999
Q ss_pred HHHHHHHH
Q 037206 57 NIVHSMAF 64 (149)
Q Consensus 57 ~La~~~~~ 64 (149)
.|++.+=+
T Consensus 179 MLaAWfRl 186 (492)
T KOG2183|consen 179 MLAAWFRL 186 (492)
T ss_pred HHHHHHHh
Confidence 88887744
No 202
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=76.68 E-value=1.1 Score=33.91 Aligned_cols=15 Identities=40% Similarity=0.550 Sum_probs=13.1
Q ss_pred cccEEEeecChhhHH
Q 037206 44 ILLVFLRGNSAGGNI 58 (149)
Q Consensus 44 ~~~i~l~G~SAGg~L 58 (149)
+..|++.|||||+|-
T Consensus 11 ~~g~i~~gds~~ahf 25 (305)
T cd01826 11 PMGVILLGDSAGAHF 25 (305)
T ss_pred CceEEEecccccccc
Confidence 567999999999984
No 203
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=76.04 E-value=2.5 Score=30.28 Aligned_cols=25 Identities=20% Similarity=0.046 Sum_probs=20.5
Q ss_pred ccEEEeecChhhHHHHHHHHHhccC
Q 037206 45 LLVFLRGNSAGGNIVHSMAFQASFD 69 (149)
Q Consensus 45 ~~i~l~G~SAGg~La~~~~~~~~~~ 69 (149)
.+|.++|||.||-++-.+...+...
T Consensus 78 ~~IsfIgHSLGGli~r~al~~~~~~ 102 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALGLLHDK 102 (217)
T ss_pred ccceEEEecccHHHHHHHHHHhhhc
Confidence 5899999999999988777665543
No 204
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=73.23 E-value=34 Score=26.45 Aligned_cols=99 Identities=10% Similarity=-0.034 Sum_probs=56.7
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCCCCCCchHHHH-HHHHHhcCC-CceEEEEeCCCCee
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGRNYGVVDNCWV-IYFENCGWA-GETEIVETQGEDHV 121 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~~~~~~~~~-~~~~~l~~~-~~v~~~~~~g~~H~ 121 (149)
.++|.++|||..+.|+-.+-..+... +.+.-..+-..-..+.... --.|. .+-+.+.++ .+..+++.=|++-=
T Consensus 116 a~kvLvvGDslm~gla~gl~~al~t~----~~i~i~~~sn~SSGlvr~d-YfdWpk~i~~~l~~~~~~a~vVV~lGaND~ 190 (354)
T COG2845 116 ADKVLVVGDSLMQGLAEGLDKALATS----PGITIVTRSNGSSGLVRDD-YFDWPKAIPELLDKHPKPAAVVVMLGANDR 190 (354)
T ss_pred CCEEEEechHHhhhhHHHHHHHhccC----CCcEEEEeecCCCCccccc-ccccHHHHHHHHHhcCCccEEEEEecCCCH
Confidence 88999999999999998887666553 2333333332222222211 22354 666677766 56666666666421
Q ss_pred eeee----------cCCchhHHHHHHHHHHHHhccc
Q 037206 122 FYLF----------NLDSEEAVPLMDKLASFLNRDN 147 (149)
Q Consensus 122 f~~~----------~~~~~~~~~~~~~i~~fl~~~~ 147 (149)
+.+. ..|..+.++-++++++++.++.
T Consensus 191 q~~~~gd~~~kf~S~~W~~eY~kRvd~~l~ia~~~~ 226 (354)
T COG2845 191 QDFKVGDVYEKFRSDEWTKEYEKRVDAILKIAHTHK 226 (354)
T ss_pred HhcccCCeeeecCchHHHHHHHHHHHHHHHHhcccC
Confidence 2111 1244555666677777766653
No 205
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=72.50 E-value=2.5 Score=32.06 Aligned_cols=23 Identities=26% Similarity=0.440 Sum_probs=20.0
Q ss_pred cccEEEeecChhhHHHHHHHHHh
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQA 66 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~ 66 (149)
-.+|.+.|||-||.+|..+....
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 275 DARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CceEEEeccccchHHHHHhcccc
Confidence 67899999999999999887653
No 206
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=72.50 E-value=2.5 Score=32.06 Aligned_cols=23 Identities=26% Similarity=0.440 Sum_probs=20.0
Q ss_pred cccEEEeecChhhHHHHHHHHHh
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQA 66 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~ 66 (149)
-.+|.+.|||-||.+|..+....
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 275 DARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CceEEEeccccchHHHHHhcccc
Confidence 67899999999999999887653
No 207
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=68.57 E-value=8.1 Score=28.19 Aligned_cols=34 Identities=24% Similarity=0.229 Sum_probs=26.4
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEE
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYL 81 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l 81 (149)
+..|+++-||-||.+++.+..+.... .++.++.+
T Consensus 189 ~~sv~vvahsyGG~~t~~l~~~f~~d----~~v~aial 222 (297)
T KOG3967|consen 189 AESVFVVAHSYGGSLTLDLVERFPDD----ESVFAIAL 222 (297)
T ss_pred cceEEEEEeccCChhHHHHHHhcCCc----cceEEEEe
Confidence 89999999999999999998766554 24555443
No 208
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=66.79 E-value=10 Score=27.66 Aligned_cols=20 Identities=25% Similarity=0.062 Sum_probs=15.3
Q ss_pred cccEEEeecChhhHHHHHHH
Q 037206 44 ILLVFLRGNSAGGNIVHSMA 63 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~ 63 (149)
.+...++|.|||+.++..-.
T Consensus 111 ~~G~~~~G~SAGAii~~~~i 130 (233)
T PRK05282 111 KNGTPYIGWSAGANVAGPTI 130 (233)
T ss_pred HCCCEEEEECHHHHhhhccc
Confidence 45688999999998755544
No 209
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=66.41 E-value=5.8 Score=30.98 Aligned_cols=26 Identities=23% Similarity=0.161 Sum_probs=21.0
Q ss_pred cccEE-EeecChhhHHHHHHHHHhccC
Q 037206 44 ILLVF-LRGNSAGGNIVHSMAFQASFD 69 (149)
Q Consensus 44 ~~~i~-l~G~SAGg~La~~~~~~~~~~ 69 (149)
-+++. |+|.|.||..++..+....+.
T Consensus 145 I~~l~avvGgSmGGMqaleWa~~yPd~ 171 (368)
T COG2021 145 IKKLAAVVGGSMGGMQALEWAIRYPDR 171 (368)
T ss_pred cceEeeeeccChHHHHHHHHHHhChHH
Confidence 66666 999999999999998765543
No 210
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=66.13 E-value=5.4 Score=32.27 Aligned_cols=39 Identities=23% Similarity=0.233 Sum_probs=32.8
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCC
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGR 88 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~ 88 (149)
+++-+..|.|-||.-+++.+++..+. ..|++.-+|.+..
T Consensus 114 p~~sY~~GcS~GGRqgl~~AQryP~d------fDGIlAgaPA~~~ 152 (474)
T PF07519_consen 114 PKYSYFSGCSTGGRQGLMAAQRYPED------FDGILAGAPAINW 152 (474)
T ss_pred CCceEEEEeCCCcchHHHHHHhChhh------cCeEEeCCchHHH
Confidence 77788999999999999999887664 7888888886554
No 211
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=65.58 E-value=6.3 Score=32.00 Aligned_cols=44 Identities=27% Similarity=0.307 Sum_probs=34.4
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCCCC
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGRNY 90 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~ 90 (149)
.++.+|+|+|-||+=+..++..+.++. ..+++.++++++++...
T Consensus 197 ~~~~~L~GESYgg~yip~~A~~L~~~~---~~~~~~~nlssvligng 240 (498)
T COG2939 197 LSPKFLAGESYGGHYIPVFAHELLEDN---IALNGNVNLSSVLIGNG 240 (498)
T ss_pred cCceeEeeccccchhhHHHHHHHHHhc---cccCCceEeeeeeecCC
Confidence 458999999999999999998887763 34677777777766543
No 212
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=62.86 E-value=9.6 Score=30.26 Aligned_cols=71 Identities=17% Similarity=0.047 Sum_probs=47.3
Q ss_pred HHHhhCCCEEEEEccCC----------CCC-CC-c-------------cc--cchh----cccEEEeecChhhHHHHHHH
Q 037206 15 SHSAKANVIVVSVDYRL----------APE-HL-L-------------GK--TLVL----ILLVFLRGNSAGGNIVHSMA 63 (149)
Q Consensus 15 ~la~~~g~~v~~vdYrl----------aPe-~~-~-------------p~--~~~~----~~~i~l~G~SAGg~La~~~~ 63 (149)
.+..+.|+.|+.-+-|- .|. .+ | |+ .++. .+++..+|||.|.......+
T Consensus 100 f~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~l 179 (403)
T KOG2624|consen 100 FLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVML 179 (403)
T ss_pred HHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehh
Confidence 33445699999999883 221 11 1 22 4444 89999999999998776666
Q ss_pred HHhccCCCCCCccceEEEeccccCC
Q 037206 64 FQASFDDLNGIKLSGIYLVQPYFGR 88 (149)
Q Consensus 64 ~~~~~~~~~~~~~~~~~l~~P~~~~ 88 (149)
..-.+. ..+|+..+++.|..-.
T Consensus 180 S~~p~~---~~kI~~~~aLAP~~~~ 201 (403)
T KOG2624|consen 180 SERPEY---NKKIKSFIALAPAAFP 201 (403)
T ss_pred cccchh---hhhhheeeeecchhhh
Confidence 543322 2468888888887643
No 213
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=62.70 E-value=64 Score=24.27 Aligned_cols=42 Identities=17% Similarity=0.033 Sum_probs=25.3
Q ss_pred cccEEEeecChhhHHHHHHHHHhc-cCCCCCCccceEEEeccccC
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQAS-FDDLNGIKLSGIYLVQPYFG 87 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~-~~~~~~~~~~~~~l~~P~~~ 87 (149)
..++-+.|||+||.-......... ++. -|.+..++.+...+.
T Consensus 135 i~k~n~VGhSmGg~~~~~Y~~~yg~dks--~P~lnK~V~l~gpfN 177 (288)
T COG4814 135 IPKFNAVGHSMGGLGLTYYMIDYGDDKS--LPPLNKLVSLAGPFN 177 (288)
T ss_pred CceeeeeeeccccHHHHHHHHHhcCCCC--CcchhheEEeccccc
Confidence 788999999999954444433322 222 245666666555444
No 214
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=61.52 E-value=19 Score=27.69 Aligned_cols=34 Identities=15% Similarity=0.197 Sum_probs=26.1
Q ss_pred CceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhcc
Q 037206 108 GETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNRD 146 (149)
Q Consensus 108 ~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~~ 146 (149)
..+++++++|+.|.. ..+..++..+.+.+||++-
T Consensus 324 p~~~l~~i~~aGH~~-----~~E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 324 PNVTLYVLEGVGHCP-----HDDRPDLVHEKLLPWLAQL 357 (360)
T ss_pred CceEEEEcCCCCCCc-----cccCHHHHHHHHHHHHHhc
Confidence 368999999999943 2345568888999999763
No 215
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=61.18 E-value=19 Score=26.51 Aligned_cols=17 Identities=29% Similarity=0.407 Sum_probs=13.6
Q ss_pred cccEEEeecChhhHHHH
Q 037206 44 ILLVFLRGNSAGGNIVH 60 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~ 60 (149)
.+..++.|.|||+.+..
T Consensus 114 ~~G~vi~G~SAGA~i~~ 130 (250)
T TIGR02069 114 HEGIILGGTSAGAAVMS 130 (250)
T ss_pred HcCCeEEEccHHHHhcc
Confidence 45689999999997653
No 216
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=60.32 E-value=19 Score=27.75 Aligned_cols=37 Identities=16% Similarity=0.009 Sum_probs=25.4
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEecc
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQP 84 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P 84 (149)
..+|.+.|||+||-++..+....... ..++.++.+.+
T Consensus 126 a~~v~LigHS~GG~~~ry~~~~~~~~----~~V~~~~tl~t 162 (336)
T COG1075 126 AKKVNLIGHSMGGLDSRYYLGVLGGA----NRVASVVTLGT 162 (336)
T ss_pred CCceEEEeecccchhhHHHHhhcCcc----ceEEEEEEecc
Confidence 68999999999999888665544421 23555555544
No 217
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=59.23 E-value=15 Score=27.66 Aligned_cols=37 Identities=14% Similarity=0.232 Sum_probs=27.7
Q ss_pred ceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhccc
Q 037206 109 ETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNRDN 147 (149)
Q Consensus 109 ~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~~~ 147 (149)
.+++++|+|..|.-.. .+.... +++++.+.+|+.++.
T Consensus 259 ~~~~~~~~g~~He~~~-E~~~~r-~~~~~~~~~~l~~~~ 295 (298)
T COG2267 259 DKELKVIPGAYHELLN-EPDRAR-EEVLKDILAWLAEAL 295 (298)
T ss_pred CceEEecCCcchhhhc-CcchHH-HHHHHHHHHHHHhhc
Confidence 4899999999995433 232222 789999999998865
No 218
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=58.91 E-value=8.6 Score=26.62 Aligned_cols=18 Identities=28% Similarity=0.313 Sum_probs=15.6
Q ss_pred EEeecChhhHHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~~ 65 (149)
.+.|-|+||-+++.++..
T Consensus 30 ~i~GtSaGai~aa~~a~g 47 (194)
T cd07207 30 RVAGTSAGAITAALLALG 47 (194)
T ss_pred eEEEECHHHHHHHHHHcC
Confidence 389999999999888864
No 219
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=57.46 E-value=12 Score=30.24 Aligned_cols=48 Identities=17% Similarity=0.164 Sum_probs=38.6
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCC----CCCccceEEEeccccCCCCC
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDL----NGIKLSGIYLVQPYFGRNYG 91 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~----~~~~~~~~~l~~P~~~~~~~ 91 (149)
.+.++|.|+|=+|+-.=+++......+. +...++|+++-.|++|....
T Consensus 167 ~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~ 218 (454)
T KOG1282|consen 167 SNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEID 218 (454)
T ss_pred CCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccCcccc
Confidence 7889999999999998888877665531 23578999999999887644
No 220
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=54.83 E-value=1e+02 Score=24.23 Aligned_cols=37 Identities=22% Similarity=0.406 Sum_probs=26.1
Q ss_pred HHHHHhcCCCceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhc
Q 037206 99 IYFENCGWAGETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNR 145 (149)
Q Consensus 99 ~~~~~l~~~~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~ 145 (149)
-|...|. |+-.+...|+..|+... .+.++.+..|++.
T Consensus 283 ~y~d~L~--G~K~lr~vPN~~H~~~~--------~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 283 FYYDKLP--GEKYLRYVPNAGHSLIG--------SDVVQSLRAFYNR 319 (367)
T ss_pred HHHhhCC--CCeeEEeCCCCCcccch--------HHHHHHHHHHHHH
Confidence 5555665 46689999999997633 4567777777764
No 221
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=53.20 E-value=82 Score=22.55 Aligned_cols=40 Identities=13% Similarity=0.026 Sum_probs=26.6
Q ss_pred HHHHHhcC-CCceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHH
Q 037206 99 IYFENCGW-AGETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASF 142 (149)
Q Consensus 99 ~~~~~l~~-~~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~f 142 (149)
.+++..++ |.+|+...|++.+|.-++.. .-++-++.+.+|
T Consensus 199 ~~~~~~~~~G~~V~~~~f~~S~HV~H~r~----~p~~Y~~~v~~f 239 (240)
T PF05705_consen 199 EHAEEARRKGWDVRAEKFEDSPHVAHLRK----HPDRYWRAVDEF 239 (240)
T ss_pred HHHHHHHHcCCeEEEecCCCCchhhhccc----CHHHHHHHHHhh
Confidence 56665554 44999999999999876642 224555555555
No 222
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=52.46 E-value=16 Score=27.25 Aligned_cols=26 Identities=19% Similarity=0.038 Sum_probs=22.5
Q ss_pred cccEEEeecChhhHHHHHHHHHhccC
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFD 69 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~ 69 (149)
.++|++.|+|=||..|-+++......
T Consensus 91 gd~I~lfGFSRGA~~AR~~a~~i~~~ 116 (277)
T PF09994_consen 91 GDRIYLFGFSRGAYTARAFANMIDKI 116 (277)
T ss_pred cceEEEEecCccHHHHHHHHHHHhhc
Confidence 78899999999999999998776443
No 223
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=52.24 E-value=18 Score=28.71 Aligned_cols=23 Identities=35% Similarity=0.366 Sum_probs=19.6
Q ss_pred ccEEEeecChhhHHHHHHHHHhc
Q 037206 45 LLVFLRGNSAGGNIVHSMAFQAS 67 (149)
Q Consensus 45 ~~i~l~G~SAGg~La~~~~~~~~ 67 (149)
-+++.+|.|-||+||...+..+.
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP 206 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAP 206 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCc
Confidence 38999999999999998886543
No 224
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=51.79 E-value=14 Score=25.31 Aligned_cols=18 Identities=22% Similarity=0.224 Sum_probs=15.2
Q ss_pred EEeecChhhHHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~~ 65 (149)
.++|-|+|+-.++.++..
T Consensus 31 ~i~GtSaGAi~aa~~a~g 48 (175)
T cd07228 31 IIAGSSIGALVGALYAAG 48 (175)
T ss_pred EEEEeCHHHHHHHHHHcC
Confidence 389999999999888753
No 225
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=50.52 E-value=15 Score=25.03 Aligned_cols=18 Identities=28% Similarity=0.268 Sum_probs=15.5
Q ss_pred EEeecChhhHHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~~ 65 (149)
.+.|-|+|+-+++.++..
T Consensus 31 ~i~GtSaGal~a~~~a~g 48 (175)
T cd07205 31 IVSGTSAGAIVGALYAAG 48 (175)
T ss_pred EEEEECHHHHHHHHHHcC
Confidence 489999999999988853
No 226
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=48.95 E-value=72 Score=25.45 Aligned_cols=56 Identities=20% Similarity=0.140 Sum_probs=41.9
Q ss_pred HHHHHHhhCCCEEEEEccCCCCCCCccc------------------------------------cchh-------cccEE
Q 037206 12 YVGSHSAKANVIVVSVDYRLAPEHLLGK------------------------------------TLVL-------ILLVF 48 (149)
Q Consensus 12 ~~~~la~~~g~~v~~vdYrlaPe~~~p~------------------------------------~~~~-------~~~i~ 48 (149)
+.+..-.+.|+.|+.+|-...|+..++. +++. -+-|+
T Consensus 19 yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~~~v~~l~~~g~i~Gvi 98 (403)
T PF06792_consen 19 YLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAARFVSDLYDEGKIDGVI 98 (403)
T ss_pred HHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHHHHHHHHHhcCCccEEE
Confidence 4555555679999999999888777763 1111 56789
Q ss_pred EeecChhhHHHHHHHHHhc
Q 037206 49 LRGNSAGGNIVHSMAFQAS 67 (149)
Q Consensus 49 l~G~SAGg~La~~~~~~~~ 67 (149)
-+|.|.|..|+..+...+.
T Consensus 99 ~~GGs~GT~lat~aMr~LP 117 (403)
T PF06792_consen 99 GIGGSGGTALATAAMRALP 117 (403)
T ss_pred EecCCccHHHHHHHHHhCC
Confidence 9999999999998877543
No 227
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=48.73 E-value=15 Score=27.43 Aligned_cols=18 Identities=33% Similarity=0.517 Sum_probs=15.6
Q ss_pred EEeecChhhHHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~~ 65 (149)
.+.|-|+||-+|++++..
T Consensus 37 ~i~GTSaGaiia~~la~g 54 (288)
T cd07213 37 LFAGTSAGSLIALGLALG 54 (288)
T ss_pred EEEEeCHHHHHHHHHHcC
Confidence 489999999999999753
No 228
>PRK00870 haloalkane dehalogenase; Provisional
Probab=47.90 E-value=33 Score=25.33 Aligned_cols=32 Identities=13% Similarity=0.247 Sum_probs=24.2
Q ss_pred eEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhcc
Q 037206 110 TEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNRD 146 (149)
Q Consensus 110 v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~~ 146 (149)
+++.++++..|.... +..++..+.+.+||+++
T Consensus 270 ~~~~~i~~~gH~~~~-----e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 270 QPHPTIKGAGHFLQE-----DSGEELAEAVLEFIRAT 301 (302)
T ss_pred cceeeecCCCccchh-----hChHHHHHHHHHHHhcC
Confidence 457899999995422 34468889999999876
No 229
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=47.75 E-value=58 Score=25.39 Aligned_cols=45 Identities=13% Similarity=0.052 Sum_probs=31.5
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCCC
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGRN 89 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~ 89 (149)
...|.++|+|.|+-+....+..+.+++ ....+.-++++...+..+
T Consensus 219 ~RpVtLvG~SLGarvI~~cL~~L~~~~-~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 219 ERPVTLVGHSLGARVIYYCLLELAERK-AFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCceEEEeecccHHHHHHHHHHHHhcc-ccCeEeeEEEecCCCCCC
Confidence 345999999999999888887776652 122356777776555443
No 230
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=47.61 E-value=78 Score=25.48 Aligned_cols=23 Identities=9% Similarity=0.036 Sum_probs=20.4
Q ss_pred cccEEEeecChhhHHHHHHHHHh
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQA 66 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~ 66 (149)
|+|+++.+.+.+++=+++.++.-
T Consensus 146 P~~~Vv~~G~T~ane~l~fcLad 168 (471)
T KOG0256|consen 146 PERVVVTNGATSANETLMFCLAD 168 (471)
T ss_pred ccceEEecccchhhHHHHHHhcC
Confidence 99999999999999888888654
No 231
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=47.50 E-value=11 Score=27.24 Aligned_cols=54 Identities=22% Similarity=0.150 Sum_probs=31.8
Q ss_pred hHHHHHHHHhhCCCEEEEEccCCCCCCCccc-----------------------cc-----hh---cccEEEeecChhhH
Q 037206 9 YHNYVGSHSAKANVIVVSVDYRLAPEHLLGK-----------------------TL-----VL---ILLVFLRGNSAGGN 57 (149)
Q Consensus 9 ~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~-----------------------~~-----~~---~~~i~l~G~SAGg~ 57 (149)
|-.-.+..-++.|+.|..++-...|...... +| ++ .+-+...|.|||++
T Consensus 50 Yv~k~~~~l~~lg~~v~~L~l~~~~~~~Ie~~l~~~d~IyVgGGNTF~LL~~lke~gld~iIr~~vk~G~~YiG~SAGA~ 129 (224)
T COG3340 50 YVEKVRNALAKLGLEVSELHLSKPPLAAIENKLMKADIIYVGGGNTFNLLQELKETGLDDIIRERVKAGTPYIGWSAGAN 129 (224)
T ss_pred HHHHHHHHHHHcCCeeeeeeccCCCHHHHHHhhhhccEEEECCchHHHHHHHHHHhCcHHHHHHHHHcCCceEEeccCce
Confidence 3333444445569999888877665433322 00 00 56677788888887
Q ss_pred HHHHH
Q 037206 58 IVHSM 62 (149)
Q Consensus 58 La~~~ 62 (149)
++.--
T Consensus 130 ia~p~ 134 (224)
T COG3340 130 IAGPT 134 (224)
T ss_pred eecCc
Confidence 65544
No 232
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=47.28 E-value=16 Score=27.80 Aligned_cols=17 Identities=24% Similarity=0.583 Sum_probs=15.1
Q ss_pred EEeecChhhHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAF 64 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~ 64 (149)
.+.|.|+||-+|++++.
T Consensus 35 ~i~GTStGgiIA~~la~ 51 (312)
T cd07212 35 WIAGTSTGGILALALLH 51 (312)
T ss_pred EEEeeChHHHHHHHHHc
Confidence 38999999999999885
No 233
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=46.71 E-value=27 Score=20.94 Aligned_cols=24 Identities=21% Similarity=0.184 Sum_probs=19.3
Q ss_pred cccEEEeecChhhHHHHHHHHHhc
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQAS 67 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~ 67 (149)
|.++.|.|-|.|=.||..++....
T Consensus 39 pK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 39 PKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp -SEEEEES-SSHHHHHHHHHHHHC
T ss_pred CceEEEEecCCcccHHHHHHHHhc
Confidence 789999999999999988887653
No 234
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=46.69 E-value=17 Score=24.37 Aligned_cols=18 Identities=28% Similarity=0.355 Sum_probs=15.0
Q ss_pred EEeecChhhHHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~~ 65 (149)
.+.|-|+||-.++.++..
T Consensus 30 ~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 30 VISGTSAGALNAALLALG 47 (204)
T ss_dssp EEEEECCHHHHHHHHHTC
T ss_pred EEEEcChhhhhHHHHHhC
Confidence 489999999988777765
No 235
>cd07049 BMC_EutL_repeat1 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 1. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of the eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 1 (the first BMC domain of EutL).
Probab=46.33 E-value=38 Score=21.49 Aligned_cols=36 Identities=17% Similarity=0.221 Sum_probs=27.0
Q ss_pred EeCCCCeee-------e--eecCCchhHHHHHHHHHHHHhcccCC
Q 037206 114 ETQGEDHVF-------Y--LFNLDSEEAVPLMDKLASFLNRDNVF 149 (149)
Q Consensus 114 ~~~g~~H~f-------~--~~~~~~~~~~~~~~~i~~fl~~~~~~ 149 (149)
.|.|..|+. . ...+...+.+..++.+.+++++.-.|
T Consensus 59 f~gGa~h~~~~~sG~vi~ii~G~dvsdV~sal~~~l~~l~~~~~f 103 (103)
T cd07049 59 FYAGAAHASTPLAGEVIGILAGPSPAEVRSGLNAAIDFIENEAYF 103 (103)
T ss_pred cccccccCccCCCccEEEEEeCCCHHHHHHHHHHHHHHHhcccCC
Confidence 355778988 4 33346778899999999999987654
No 236
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=46.26 E-value=31 Score=26.30 Aligned_cols=33 Identities=15% Similarity=0.305 Sum_probs=25.2
Q ss_pred ceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhc
Q 037206 109 ETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNR 145 (149)
Q Consensus 109 ~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~ 145 (149)
.+++++|+|+.|....- ++..+.++.+.+||++
T Consensus 300 ~~~l~~~~g~~H~i~~E----~~~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 300 NKELHTLEDMDHVITIE----PGNEEVLKKIIEWISN 332 (332)
T ss_pred CcEEEEECCCCCCCccC----CCHHHHHHHHHHHhhC
Confidence 67899999999965432 2346789999999863
No 237
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=45.99 E-value=30 Score=24.73 Aligned_cols=31 Identities=13% Similarity=0.128 Sum_probs=23.5
Q ss_pred ceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHh
Q 037206 109 ETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLN 144 (149)
Q Consensus 109 ~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~ 144 (149)
.+++.++++++|.+.. +..++..+.|.+|++
T Consensus 248 ~~~~~~~~~~gH~~~~-----e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 248 TATLHVVPGGGHLVHE-----EQADGVVGLILQAAE 278 (278)
T ss_pred CCeEEEECCCCCcccc-----cCHHHHHHHHHHHhC
Confidence 5789999999996543 244678888888874
No 238
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=45.81 E-value=15 Score=27.85 Aligned_cols=17 Identities=29% Similarity=0.481 Sum_probs=15.0
Q ss_pred EEeecChhhHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAF 64 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~ 64 (149)
.++|.|+||-+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 58999999999998863
No 239
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=45.62 E-value=7.6 Score=28.54 Aligned_cols=76 Identities=14% Similarity=0.084 Sum_probs=47.5
Q ss_pred HHHHHHHHhhCCCEEEEEccCCCCC-C-Cc--cc---------cchh----cccEEEeecChhhHHHHHHHHHhccCCCC
Q 037206 10 HNYVGSHSAKANVIVVSVDYRLAPE-H-LL--GK---------TLVL----ILLVFLRGNSAGGNIVHSMAFQASFDDLN 72 (149)
Q Consensus 10 ~~~~~~la~~~g~~v~~vdYrlaPe-~-~~--p~---------~~~~----~~~i~l~G~SAGg~La~~~~~~~~~~~~~ 72 (149)
-........+-+...|.+.-|-.|. . .+ .. ..+. ...|+++|||-|-+=.+.......-
T Consensus 55 ~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~---- 130 (299)
T KOG4840|consen 55 TTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTK---- 130 (299)
T ss_pred HHHHHHHHhhccceeeeeeccccccccccccccccHHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhccc----
Confidence 3333333445588899888887765 1 11 11 2222 6699999999998877666533222
Q ss_pred CCccceEEEeccccCCC
Q 037206 73 GIKLSGIYLVQPYFGRN 89 (149)
Q Consensus 73 ~~~~~~~~l~~P~~~~~ 89 (149)
+..+.+.|+..|+-|.+
T Consensus 131 ~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 131 DRKIRAAILQAPVSDRE 147 (299)
T ss_pred hHHHHHHHHhCccchhh
Confidence 13467778888887654
No 240
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=45.09 E-value=27 Score=24.58 Aligned_cols=32 Identities=16% Similarity=0.105 Sum_probs=24.2
Q ss_pred ceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhc
Q 037206 109 ETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNR 145 (149)
Q Consensus 109 ~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~ 145 (149)
.+++.+++++.|-+.. +..++..+.|.+|+++
T Consensus 210 ~~~~~~i~~~gH~~~~-----e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 210 ALPLHVIPNAGHNAHR-----ENPAAFAASLAQILRL 241 (242)
T ss_pred cCeEEEeCCCCCchhh-----hChHHHHHHHHHHHhh
Confidence 5899999999994433 3346778888888875
No 241
>COG4874 Uncharacterized protein conserved in bacteria containing a pentein-type domain [Function unknown]
Probab=44.92 E-value=64 Score=24.04 Aligned_cols=43 Identities=26% Similarity=0.230 Sum_probs=30.2
Q ss_pred hhhHHHHHHHHhhCCCEEEEEccCC---CCCCCccccchh---cccEEEe
Q 037206 7 STYHNYVGSHSAKANVIVVSVDYRL---APEHLLGKTLVL---ILLVFLR 50 (149)
Q Consensus 7 ~~~~~~~~~la~~~g~~v~~vdYrl---aPe~~~p~~~~~---~~~i~l~ 50 (149)
.++..+...|-+ .|+.|...||.- .|+.-||..|.. ...+++.
T Consensus 57 ~Ef~amve~L~~-~GvdV~ifddtg~~~TPDsvFPNNWFSTh~~g~v~Ly 105 (318)
T COG4874 57 SEFNAMVEGLRQ-AGVDVVIFDDTGQGETPDSVFPNNWFSTHEAGEVFLY 105 (318)
T ss_pred HHHHHHHHHHHh-cCceEEEeecCCCCCCCcccCCCcccccCcCCeEEEe
Confidence 456667777755 599999999954 467778888876 4444444
No 242
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=44.71 E-value=40 Score=27.02 Aligned_cols=57 Identities=21% Similarity=0.146 Sum_probs=36.5
Q ss_pred CCCCchhhH-HHHHHHHhhCCCEEEEEccCC-CCCCCccc-------cchh-------cccEEEeecChhhHHH
Q 037206 2 GSPFCSTYH-NYVGSHSAKANVIVVSVDYRL-APEHLLGK-------TLVL-------ILLVFLRGNSAGGNIV 59 (149)
Q Consensus 2 ~s~~~~~~~-~~~~~la~~~g~~v~~vdYrl-aPe~~~p~-------~~~~-------~~~i~l~G~SAGg~La 59 (149)
|+|.+.+-+ +.+..|+++ |+.||.+|--. -=..+-|. +-+. ..|+.+.|.|-|+-+-
T Consensus 268 GDGGWr~lDk~v~~~l~~~-gvpVvGvdsLRYfW~~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvl 340 (456)
T COG3946 268 GDGGWRDLDKEVAEALQKQ-GVPVVGVDSLRYFWSERTPEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVL 340 (456)
T ss_pred cCCchhhhhHHHHHHHHHC-CCceeeeehhhhhhccCCHHHHHHHHHHHHHHHHHhhCcceEEEEeecccchhh
Confidence 455655544 467777765 99999988421 11223333 1111 8899999999999753
No 243
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=44.59 E-value=20 Score=26.28 Aligned_cols=19 Identities=26% Similarity=0.139 Sum_probs=15.8
Q ss_pred EEeecChhhHHHHHHHHHh
Q 037206 48 FLRGNSAGGNIVHSMAFQA 66 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~~~ 66 (149)
.+.|-|||+-.++.++...
T Consensus 30 ~i~GtSaGAi~a~~~~~g~ 48 (266)
T cd07208 30 LVIGVSAGALNAASYLSGQ 48 (266)
T ss_pred EEEEECHHHHhHHHHHhCC
Confidence 4899999999999887543
No 244
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=44.58 E-value=17 Score=28.15 Aligned_cols=17 Identities=29% Similarity=0.497 Sum_probs=15.2
Q ss_pred EEeecChhhHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAF 64 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~ 64 (149)
.+.|.|+||-+|+.++.
T Consensus 46 liaGTStGgiiA~~la~ 62 (349)
T cd07214 46 VIAGTSTGGLITAMLTA 62 (349)
T ss_pred EEeeCCHHHHHHHHHhc
Confidence 48999999999999985
No 245
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=44.04 E-value=19 Score=27.13 Aligned_cols=16 Identities=19% Similarity=0.378 Sum_probs=14.6
Q ss_pred EeecChhhHHHHHHHH
Q 037206 49 LRGNSAGGNIVHSMAF 64 (149)
Q Consensus 49 l~G~SAGg~La~~~~~ 64 (149)
+.|.|+||-+|+.++.
T Consensus 45 i~GTStGgiiA~~la~ 60 (308)
T cd07211 45 ICGVSTGAILAFLLGL 60 (308)
T ss_pred EEecChhHHHHHHHhc
Confidence 8999999999999875
No 246
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=43.86 E-value=1.4e+02 Score=22.66 Aligned_cols=64 Identities=19% Similarity=0.212 Sum_probs=38.4
Q ss_pred CCCEEEEEccCCCCCC-Cc------cc------------cchh-----cccEEEeecChhhHHHHHHHHHhccCCCCCCc
Q 037206 20 ANVIVVSVDYRLAPEH-LL------GK------------TLVL-----ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIK 75 (149)
Q Consensus 20 ~g~~v~~vdYrlaPe~-~~------p~------------~~~~-----~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~ 75 (149)
-.+.++++.|.-.|.- .| +. +|-. .=|++|.|.|-|+.-+........+. ...
T Consensus 60 GD~A~va~QYSylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~---~~~ 136 (289)
T PF10081_consen 60 GDVAIVAMQYSYLPSWLSFLVDRDAAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDL---RDR 136 (289)
T ss_pred CCeEEEEeccccccchHHHhcccchHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHh---hhh
Confidence 3789999999977652 11 11 2222 45799999999987544443222222 234
Q ss_pred cceEEEecccc
Q 037206 76 LSGIYLVQPYF 86 (149)
Q Consensus 76 ~~~~~l~~P~~ 86 (149)
+.|.+...|..
T Consensus 137 vdGalw~GpP~ 147 (289)
T PF10081_consen 137 VDGALWVGPPF 147 (289)
T ss_pred cceEEEeCCCC
Confidence 67777666543
No 247
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=43.74 E-value=19 Score=26.32 Aligned_cols=17 Identities=35% Similarity=0.614 Sum_probs=15.4
Q ss_pred EeecChhhHHHHHHHHH
Q 037206 49 LRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 49 l~G~SAGg~La~~~~~~ 65 (149)
+.|-|+||-+|+.++..
T Consensus 38 i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 38 IAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeccHHHHHHHHHhcC
Confidence 89999999999999865
No 248
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=42.08 E-value=11 Score=25.36 Aligned_cols=15 Identities=33% Similarity=0.200 Sum_probs=12.2
Q ss_pred cccEEEeecChhhHH
Q 037206 44 ILLVFLRGNSAGGNI 58 (149)
Q Consensus 44 ~~~i~l~G~SAGg~L 58 (149)
.+..+++|.|||+.+
T Consensus 67 ~~G~vi~G~SAGA~i 81 (154)
T PF03575_consen 67 RKGGVIIGTSAGAMI 81 (154)
T ss_dssp HTTSEEEEETHHHHC
T ss_pred HCCCEEEEEChHHhh
Confidence 444899999999965
No 249
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=41.57 E-value=24 Score=24.06 Aligned_cols=18 Identities=28% Similarity=0.388 Sum_probs=15.3
Q ss_pred EEeecChhhHHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~~ 65 (149)
.+.|-|||+-.++.++..
T Consensus 29 ~v~GtSaGAi~aa~~a~g 46 (172)
T cd07198 29 IIAGTSAGAIVAALLASG 46 (172)
T ss_pred EEEEECHHHHHHHHHHcC
Confidence 489999999999888754
No 250
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=41.34 E-value=26 Score=27.28 Aligned_cols=25 Identities=16% Similarity=-0.032 Sum_probs=21.4
Q ss_pred cccEEEeecChhhHHHHHHHHHhcc
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASF 68 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~ 68 (149)
.++|++.|+|-|+..|-.++..++.
T Consensus 121 GD~Iy~FGFSRGAf~aRVlagmir~ 145 (423)
T COG3673 121 GDEIYAFGFSRGAFSARVLAGMIRH 145 (423)
T ss_pred CCeEEEeeccchhHHHHHHHHHHHH
Confidence 8999999999999999888766543
No 251
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=40.73 E-value=55 Score=23.60 Aligned_cols=32 Identities=16% Similarity=0.097 Sum_probs=24.1
Q ss_pred CceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHh
Q 037206 108 GETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLN 144 (149)
Q Consensus 108 ~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~ 144 (149)
..+++.++++..|.... +..++..+.+.+|++
T Consensus 250 ~~~~~~~i~~agH~~~~-----e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 250 PDAQLHVFSRCGHWAQW-----EHADAFNRLVIDFLR 281 (282)
T ss_pred CCCEEEEeCCCCcCCcc-----cCHHHHHHHHHHHhh
Confidence 36889999999995433 344677888889986
No 252
>cd07046 BMC_PduU-EutS 1,2-propanediol utilization protein U (PduU)/ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain. PduU encapsulates several related enzymes within a shell composed of a few thousand protein subunits. PduU exists as a hexamer which might further assemble into the flat facets of the polyhedral outer shell of the pdu organelle. This proteinaceous noncarboxysome microcompartment is involved in coenzyme B12-dependent degradation of 1,2-propanediol. The core of PduU is related to the typical BMC domain and its natural oligomeric state is a cyclic hexamer. Unlike other typical BMC domain proteins, the 3D topology of PduU reveals a circular permuted variation on the typical BMC fold which leads to several unique features. The exact functions related to those unique features are still not clear. Another difference is the presence of a deep cavity on one side of the hexamer as well as an intermolecular six-stranded beta barrel that seems to
Probab=40.55 E-value=99 Score=19.86 Aligned_cols=41 Identities=15% Similarity=0.125 Sum_probs=31.5
Q ss_pred CceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhcccCC
Q 037206 108 GETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNRDNVF 149 (149)
Q Consensus 108 ~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~~~~~ 149 (149)
.+|++...+ ..+|+..+.....+.+.+++...+++++.+.|
T Consensus 62 A~Vel~~~~-~~~g~vii~GdvsaV~aAl~a~~~~~~~~~~f 102 (110)
T cd07046 62 ADVEIGFLD-RFSGALVITGDVSEVESALEAVVDYLRETLGF 102 (110)
T ss_pred cCeEEEEEe-CCeEEEEEEECHHHHHHHHHHHHHHHhhccCc
Confidence 367765554 34888777677778889999999999998876
No 253
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=38.91 E-value=27 Score=27.81 Aligned_cols=18 Identities=17% Similarity=0.361 Sum_probs=15.6
Q ss_pred EEeecChhhHHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~~ 65 (149)
++.|-|||+-+++.++..
T Consensus 98 iI~GtSAGAivaalla~~ 115 (407)
T cd07232 98 VISGTSGGSLVAALLCTR 115 (407)
T ss_pred EEEEECHHHHHHHHHHcC
Confidence 489999999999888863
No 254
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=38.89 E-value=50 Score=24.27 Aligned_cols=34 Identities=26% Similarity=0.296 Sum_probs=24.7
Q ss_pred CceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhc
Q 037206 108 GETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNR 145 (149)
Q Consensus 108 ~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~ 145 (149)
..+++..++++.| +.. ..+.-.+..+.|.+||++
T Consensus 241 ~~v~~~~~~~~~H-~l~---~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 241 PGIERVEIDGADH-TFS---DRVWREWVAARTTEWLRR 274 (274)
T ss_pred CCeEEEecCCCCc-ccc---cHHHHHHHHHHHHHHHhC
Confidence 3689999999999 321 223446788899999864
No 255
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=38.58 E-value=29 Score=24.96 Aligned_cols=17 Identities=29% Similarity=0.268 Sum_probs=15.0
Q ss_pred EEeecChhhHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAF 64 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~ 64 (149)
.+.|-|+|+-+++.++.
T Consensus 31 ~i~GtSaGAi~aa~~a~ 47 (221)
T cd07210 31 AISGTSAGALVGGLFAS 47 (221)
T ss_pred EEEEeCHHHHHHHHHHc
Confidence 38999999999988885
No 256
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=38.56 E-value=1e+02 Score=23.56 Aligned_cols=44 Identities=7% Similarity=0.049 Sum_probs=28.3
Q ss_pred HHHHHhcCCCceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhcc
Q 037206 99 IYFENCGWAGETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNRD 146 (149)
Q Consensus 99 ~~~~~l~~~~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~~ 146 (149)
.+.+.+. +.+.++++++++.|++... + ...++.+..+.+||+++
T Consensus 307 ~~~~~~~-~~~~~~~~~~~gH~~~~~~-~--~~~~~v~~~i~~wl~~~ 350 (350)
T TIGR01836 307 ALNDLVS-SEDYTELSFPGGHIGIYVS-G--KAQKEVPPAIGKWLQAR 350 (350)
T ss_pred HHHHHcC-CCCeEEEEcCCCCEEEEEC-c--hhHhhhhHHHHHHHHhC
Confidence 3444443 2367888888766655442 2 24568899999999864
No 257
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=38.07 E-value=28 Score=27.83 Aligned_cols=18 Identities=22% Similarity=0.423 Sum_probs=15.7
Q ss_pred EEeecChhhHHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~~ 65 (149)
+++|.|||+-+|+.++..
T Consensus 104 vIsGTSaGAivAal~as~ 121 (421)
T cd07230 104 IISGSSAGSIVAAILCTH 121 (421)
T ss_pred EEEEECHHHHHHHHHHcC
Confidence 699999999999888863
No 258
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=37.92 E-value=28 Score=27.00 Aligned_cols=17 Identities=35% Similarity=0.632 Sum_probs=15.2
Q ss_pred EEeecChhhHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAF 64 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~ 64 (149)
.++|.|+||-+|+.++.
T Consensus 44 lIaGTStGgIIAa~la~ 60 (344)
T cd07217 44 FVGGTSTGSIIAACIAL 60 (344)
T ss_pred EEEEecHHHHHHHHHHc
Confidence 48999999999999975
No 259
>PLN02965 Probable pheophorbidase
Probab=37.89 E-value=46 Score=23.86 Aligned_cols=42 Identities=10% Similarity=0.070 Sum_probs=25.2
Q ss_pred HHHHHhcCC-CceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhc
Q 037206 99 IYFENCGWA-GETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNR 145 (149)
Q Consensus 99 ~~~~~l~~~-~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~ 145 (149)
...+.+.+. ..++++++++++|.... ++.++..+.+.+|++.
T Consensus 210 ~~~~~~~~~~~~a~~~~i~~~GH~~~~-----e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 210 VRQDVMVENWPPAQTYVLEDSDHSAFF-----SVPTTLFQYLLQAVSS 252 (255)
T ss_pred HHHHHHHHhCCcceEEEecCCCCchhh-----cCHHHHHHHHHHHHHH
Confidence 344444433 35789999999996544 2334556666666543
No 260
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=36.67 E-value=27 Score=26.69 Aligned_cols=16 Identities=25% Similarity=0.449 Sum_probs=13.9
Q ss_pred EEeecChhhHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMA 63 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~ 63 (149)
.++|.|+||-+|+.++
T Consensus 43 li~GTStGgiia~~l~ 58 (329)
T cd07215 43 LVAGTSTGGILTCLYL 58 (329)
T ss_pred eeeccCHHHHHHHHHh
Confidence 4899999999998865
No 261
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=36.52 E-value=33 Score=23.03 Aligned_cols=16 Identities=25% Similarity=0.549 Sum_probs=14.1
Q ss_pred EEeecChhhHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMA 63 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~ 63 (149)
.+.|-|||+-.++.++
T Consensus 31 ~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 31 YLAGTSGGAWVAATLY 46 (155)
T ss_pred EEEEEcHHHHHHHHHh
Confidence 4899999999988887
No 262
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=36.25 E-value=52 Score=22.56 Aligned_cols=63 Identities=13% Similarity=0.088 Sum_probs=47.0
Q ss_pred CCCCCchhhHHHHHHHHhhCCCEEEEEccCCCCCCCccc---cchh-----cccEEEeecChhhHHHHHHHHHh
Q 037206 1 MGSPFCSTYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK---TLVL-----ILLVFLRGNSAGGNIVHSMAFQA 66 (149)
Q Consensus 1 ~~s~~~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~---~~~~-----~~~i~l~G~SAGg~La~~~~~~~ 66 (149)
+||.++-.+-.-+....++.|+. .|.|.+--|+.|. +|+. .-++++.+-..-+||+..++...
T Consensus 5 mGS~SD~~~~~~a~~~L~~~gi~---~dv~V~SaHRtp~~~~~~~~~a~~~g~~viIa~AG~aa~Lpgvva~~t 75 (156)
T TIGR01162 5 MGSDSDLPTMKKAADILEEFGIP---YELRVVSAHRTPELMLEYAKEAEERGIKVIIAGAGGAAHLPGMVAALT 75 (156)
T ss_pred ECcHhhHHHHHHHHHHHHHcCCC---eEEEEECcccCHHHHHHHHHHHHHCCCeEEEEeCCccchhHHHHHhcc
Confidence 36667766666677777888887 6778888899998 5554 34788888777888888887654
No 263
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=36.05 E-value=32 Score=24.50 Aligned_cols=19 Identities=21% Similarity=0.104 Sum_probs=15.9
Q ss_pred EEeecChhhHHHHHHHHHh
Q 037206 48 FLRGNSAGGNIVHSMAFQA 66 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~~~ 66 (149)
.+.|.|+|+-.++.++...
T Consensus 29 ~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 29 IISGTSIGAINGALIAGGD 47 (215)
T ss_pred EEEEECHHHHHHHHHHcCC
Confidence 3899999999998888644
No 264
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=34.37 E-value=37 Score=24.82 Aligned_cols=18 Identities=22% Similarity=0.265 Sum_probs=15.3
Q ss_pred EEeecChhhHHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~~ 65 (149)
.+.|-|||+-.++.++..
T Consensus 34 ~i~GtSAGAl~aa~~a~g 51 (243)
T cd07204 34 RIAGASAGAIVAAVVLCG 51 (243)
T ss_pred EEEEEcHHHHHHHHHHhC
Confidence 489999999998888754
No 265
>PF14359 DUF4406: Domain of unknown function (DUF4406)
Probab=34.30 E-value=1.1e+02 Score=18.73 Aligned_cols=58 Identities=19% Similarity=0.154 Sum_probs=37.2
Q ss_pred hhHHHHHHHHhhCCCEEEEEccCCCCCCCccccch-------h-cccEEEee---cChhhHHHHHHHHHh
Q 037206 8 TYHNYVGSHSAKANVIVVSVDYRLAPEHLLGKTLV-------L-ILLVFLRG---NSAGGNIVHSMAFQA 66 (149)
Q Consensus 8 ~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~~~~-------~-~~~i~l~G---~SAGg~La~~~~~~~ 66 (149)
.+...++.|.+ .|+.|+++--...|+..-...|+ . .+.|++.+ +|-|+.+=..+|..+
T Consensus 17 ~f~~~a~~L~~-~G~~vvnPa~~~~~~~~~~~~ym~~~l~~L~~cD~i~~l~gWe~S~GA~~E~~~A~~l 85 (92)
T PF14359_consen 17 AFNAAAKRLRA-KGYEVVNPAELGIPEGLSWEEYMRICLAMLSDCDAIYMLPGWENSRGARLEHELAKKL 85 (92)
T ss_pred HHHHHHHHHHH-CCCEEeCchhhCCCCCCCHHHHHHHHHHHHHhCCEEEEcCCcccCcchHHHHHHHHHC
Confidence 44556667755 49999998776334332222222 2 77777765 589999888887654
No 266
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=34.29 E-value=77 Score=21.56 Aligned_cols=63 Identities=14% Similarity=0.058 Sum_probs=41.1
Q ss_pred CCCCCchhhHHHHHHHHhhCCCEEEEEccCCCCCCCccc---cchh-----cccEEEeecChhhHHHHHHHHHh
Q 037206 1 MGSPFCSTYHNYVGSHSAKANVIVVSVDYRLAPEHLLGK---TLVL-----ILLVFLRGNSAGGNIVHSMAFQA 66 (149)
Q Consensus 1 ~~s~~~~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~p~---~~~~-----~~~i~l~G~SAGg~La~~~~~~~ 66 (149)
+||.++..+-.-++...++.| +..|.|.+.-|+-|. +++. .-++++.+-..-++|+..++...
T Consensus 7 ~gs~SD~~~~~~a~~~L~~~g---i~~~~~V~saHR~p~~l~~~~~~~~~~~~~viIa~AG~~a~Lpgvva~~t 77 (150)
T PF00731_consen 7 MGSTSDLPIAEEAAKTLEEFG---IPYEVRVASAHRTPERLLEFVKEYEARGADVIIAVAGMSAALPGVVASLT 77 (150)
T ss_dssp ESSGGGHHHHHHHHHHHHHTT----EEEEEE--TTTSHHHHHHHHHHTTTTTESEEEEEEESS--HHHHHHHHS
T ss_pred eCCHHHHHHHHHHHHHHHHcC---CCEEEEEEeccCCHHHHHHHHHHhccCCCEEEEEECCCcccchhhheecc
Confidence 367777777777777777788 455778888899988 5554 23577776666678888887654
No 267
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=34.22 E-value=36 Score=25.96 Aligned_cols=18 Identities=22% Similarity=0.403 Sum_probs=15.6
Q ss_pred EEeecChhhHHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~~ 65 (149)
++.|.|||+-+++.++..
T Consensus 100 ~i~GtSaGAi~aa~~~~~ 117 (298)
T cd07206 100 VISGSSAGAIVAALLGTH 117 (298)
T ss_pred EEEEEcHHHHHHHHHHcC
Confidence 589999999999988854
No 268
>cd03365 TOPRIM_TopoIIA TOPRIM_TopoIIA: topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain of the type found in proteins of the type IIA family of DNA topoisomerases similar to Saccharomyces cerevisiae Topoisomerase II. TopoIIA enzymes cut both strands of the duplex DNA to remove (relax) both positive and negative supercoils in DNA. These enzymes covalently attach to the 5' ends of the cut DNA, separate the free ends of the cleaved strands, pass another region of the duplex through this gap, then rejoin the ends. These proteins also catenate/ decatenate duplex rings. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). This glutamate and two aspartates, cluster together to form a highly acid surface patch. The conserved glutamate may act as a general base in strand joining and as a general acid in strand cleavage by topisomerases. The DXD motif may co-ordinate Mg2+, a cofact
Probab=33.38 E-value=27 Score=22.85 Aligned_cols=12 Identities=25% Similarity=0.368 Sum_probs=9.3
Q ss_pred EEEeecChhhHH
Q 037206 47 VFLRGNSAGGNI 58 (149)
Q Consensus 47 i~l~G~SAGg~L 58 (149)
+.+=||||||..
T Consensus 4 flvEGDSA~gsa 15 (120)
T cd03365 4 ILTEGDSAKALA 15 (120)
T ss_pred EEEeCCCchhhH
Confidence 456699999964
No 269
>cd01030 TOPRIM_TopoIIA_like TOPRIM_TopoIIA_like: topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain of the type found in proteins of the type IIA family of DNA topoisomerases similar to Saccharomyces cerevisiae Topoisomerase II. TopoIIA enzymes cut both strands of the duplex DNA to remove (relax) both positive and negative supercoils in DNA. These enzymes covalently attach to the 5' ends of the cut DNA, separate the free ends of the cleaved strands, pass another region of the duplex through this gap, then rejoin the ends. These proteins also catenate/ decatenate duplex rings. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). The conserved glutamate may act as a general base in strand joining and as a general acid in strand cleavage by topisomerases. The DXD motif may co-ordinate Mg2+, a cofactor required for full catalytic function.
Probab=33.31 E-value=24 Score=22.84 Aligned_cols=11 Identities=45% Similarity=1.054 Sum_probs=8.9
Q ss_pred EEEeecChhhH
Q 037206 47 VFLRGNSAGGN 57 (149)
Q Consensus 47 i~l~G~SAGg~ 57 (149)
+.+=||||||.
T Consensus 4 ~lvEGDSA~gs 14 (115)
T cd01030 4 ILVEGDSAGGS 14 (115)
T ss_pred EEEecCCcchh
Confidence 45669999996
No 270
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=33.25 E-value=39 Score=26.08 Aligned_cols=18 Identities=22% Similarity=0.390 Sum_probs=15.4
Q ss_pred EEeecChhhHHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~~ 65 (149)
++.|.|||+-+|+.++..
T Consensus 99 ~i~GsSaGAivaa~~~~~ 116 (323)
T cd07231 99 VIAGSSVGSIVCAIIATR 116 (323)
T ss_pred EEEEECHHHHHHHHHHcC
Confidence 489999999999888763
No 271
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=33.00 E-value=18 Score=29.62 Aligned_cols=21 Identities=19% Similarity=0.362 Sum_probs=16.5
Q ss_pred EEeecChhhHHHHHHHHHhcc
Q 037206 48 FLRGNSAGGNIVHSMAFQASF 68 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~~~~~ 68 (149)
++.|.|+||-+|..++.+-.+
T Consensus 205 IIsGsS~GaivAsl~~v~~~e 225 (543)
T KOG2214|consen 205 IISGSSAGAIVASLVGVRSNE 225 (543)
T ss_pred hhcCCchhHHHHHHHhhcchH
Confidence 578999999999888865443
No 272
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=33.00 E-value=1.1e+02 Score=21.90 Aligned_cols=37 Identities=24% Similarity=0.344 Sum_probs=28.4
Q ss_pred ceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhccc
Q 037206 109 ETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNRDN 147 (149)
Q Consensus 109 ~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~~~ 147 (149)
+.+...+++..|.... ...+...+.++++.+|+.+++
T Consensus 262 ~~~~~~~~~~~H~~~~--~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 262 PKKLLFVPGGGHIDLY--DNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred CceEEEecCCcccccc--CccHHHHHHHHHHHHHHHHhc
Confidence 7788999999997643 223455689999999998865
No 273
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=32.99 E-value=37 Score=25.82 Aligned_cols=18 Identities=28% Similarity=0.237 Sum_probs=15.2
Q ss_pred EEeecChhhHHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~~ 65 (149)
.++|.|+|+-+++.++.-
T Consensus 46 ~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 46 MVGGTSIGAFIGALYAEE 63 (306)
T ss_pred EEEEECHHHHHHHHHHcC
Confidence 489999999999888754
No 274
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=32.74 E-value=40 Score=24.45 Aligned_cols=18 Identities=33% Similarity=0.193 Sum_probs=15.4
Q ss_pred EEeecChhhHHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~~ 65 (149)
.+.|-|||+-.++.++..
T Consensus 32 ~i~G~SAGAl~aa~~asg 49 (233)
T cd07224 32 PLAGASAGSLAAACSASG 49 (233)
T ss_pred EEEEEcHHHHHHHHHHcC
Confidence 599999999998888754
No 275
>cd03366 TOPRIM_TopoIIA_GyrB TOPRIM_TopoIIA_GyrB: topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain of the type found in proteins of the type IIA family of DNA topoisomerases similar to the Escherichia coli GyrB subunit. TopoIIA enzymes cut both strands of the duplex DNA to remove (relax) both positive and negative supercoils in DNA. These enzymes covalently attach to the 5' ends of the cut DNA, separate the free ends of the cleaved strands, pass another region of the duplex through this gap, then rejoin the ends. These proteins also catenate/ decatenate duplex rings. DNA gyrase is more effective at relaxing supercoils than decatentating DNA. DNA gyrase in addition inserts negative supercoils in the presence of ATP. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). The conserved glutamate may act as a general base in strand joining and as a general acid in strand cleava
Probab=32.25 E-value=22 Score=23.00 Aligned_cols=11 Identities=45% Similarity=0.896 Sum_probs=8.8
Q ss_pred EEEeecChhhH
Q 037206 47 VFLRGNSAGGN 57 (149)
Q Consensus 47 i~l~G~SAGg~ 57 (149)
+.+=||||||.
T Consensus 4 ~lvEGDSAggs 14 (114)
T cd03366 4 YIVEGDSAGGS 14 (114)
T ss_pred EEEeCCCCccc
Confidence 45669999995
No 276
>COG1623 Predicted nucleic-acid-binding protein (contains the HHH domain) [General function prediction only]
Probab=31.40 E-value=56 Score=24.96 Aligned_cols=26 Identities=15% Similarity=0.149 Sum_probs=22.7
Q ss_pred chhhHHHHHHHHhhCCCEEEEEccCC
Q 037206 6 CSTYHNYVGSHSAKANVIVVSVDYRL 31 (149)
Q Consensus 6 ~~~~~~~~~~la~~~g~~v~~vdYrl 31 (149)
+.+-|+-+.+.|+++|+.|++|.-|.
T Consensus 104 tGtRHRTAER~AkqTG~~VIaiS~rr 129 (349)
T COG1623 104 TGTRHRTAERVAKQTGNPVIAISERR 129 (349)
T ss_pred CccccchHHHHHHHhCCeEEEEeccc
Confidence 45667889999999999999999885
No 277
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=31.24 E-value=2.4e+02 Score=21.49 Aligned_cols=62 Identities=11% Similarity=-0.050 Sum_probs=44.6
Q ss_pred hhhHHHHHHHHhhCCCEEEEEccCCCCCCCc--cc--------cchh-----cccEEEeecChhhHHHHHHHHHhcc
Q 037206 7 STYHNYVGSHSAKANVIVVSVDYRLAPEHLL--GK--------TLVL-----ILLVFLRGNSAGGNIVHSMAFQASF 68 (149)
Q Consensus 7 ~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~--p~--------~~~~-----~~~i~l~G~SAGg~La~~~~~~~~~ 68 (149)
....++.+.+-+-.|..|.++|---.-+..+ |. +.+. ++-+.++|.|-||.++-.++..+..
T Consensus 39 ~~~~~~~q~l~~~~g~~v~~leig~g~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~SQGglv~Raliq~cd~ 115 (296)
T KOG2541|consen 39 LSMANLTQLLEELPGSPVYCLEIGDGIKDSSLMPLWEQVDVACEKVKQMPELSQGYNIVGYSQGGLVARALIQFCDN 115 (296)
T ss_pred chHHHHHHHHHhCCCCeeEEEEecCCcchhhhccHHHHHHHHHHHHhcchhccCceEEEEEccccHHHHHHHHhCCC
Confidence 4566778888888899999988754422222 22 1122 8889999999999999998887765
No 278
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=31.12 E-value=41 Score=24.68 Aligned_cols=17 Identities=24% Similarity=0.343 Sum_probs=14.8
Q ss_pred EeecChhhHHHHHHHHH
Q 037206 49 LRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 49 l~G~SAGg~La~~~~~~ 65 (149)
+.|-|||+-.++.++..
T Consensus 34 i~GtSAGAl~aa~~a~g 50 (245)
T cd07218 34 ISGASAGALAACCLLCD 50 (245)
T ss_pred EEEEcHHHHHHHHHHhC
Confidence 89999999999888754
No 279
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=31.11 E-value=1.3e+02 Score=21.32 Aligned_cols=18 Identities=33% Similarity=0.128 Sum_probs=14.4
Q ss_pred cccEEEeecChhhHHHHH
Q 037206 44 ILLVFLRGNSAGGNIVHS 61 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~ 61 (149)
.+...+.|-|||+.+...
T Consensus 112 ~~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 112 ERGVVYIGWSAGSNCWFP 129 (212)
T ss_pred HCCCEEEEECHhHHhhCC
Confidence 456899999999976655
No 280
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=30.00 E-value=31 Score=25.50 Aligned_cols=13 Identities=38% Similarity=0.437 Sum_probs=10.4
Q ss_pred cccEEEeecChhh
Q 037206 44 ILLVFLRGNSAGG 56 (149)
Q Consensus 44 ~~~i~l~G~SAGg 56 (149)
..+|+++|||.|-
T Consensus 179 R~NvlLlGDslgD 191 (246)
T PF05822_consen 179 RTNVLLLGDSLGD 191 (246)
T ss_dssp --EEEEEESSSGG
T ss_pred CCcEEEecCccCC
Confidence 7889999999987
No 281
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=29.82 E-value=1.1e+02 Score=23.07 Aligned_cols=36 Identities=11% Similarity=0.012 Sum_probs=25.8
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEecc
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQP 84 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P 84 (149)
.+-+-+.|+|-||.++-.++.++... .++-+|.+..
T Consensus 79 ~~G~~~IGfSQGgl~lRa~vq~c~~~-----~V~nlISlgg 114 (279)
T PF02089_consen 79 ANGFNAIGFSQGGLFLRAYVQRCNDP-----PVHNLISLGG 114 (279)
T ss_dssp TT-EEEEEETCHHHHHHHHHHH-TSS------EEEEEEES-
T ss_pred hcceeeeeeccccHHHHHHHHHCCCC-----CceeEEEecC
Confidence 57899999999999999999888643 4666665553
No 282
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=29.60 E-value=2.3e+02 Score=23.14 Aligned_cols=35 Identities=9% Similarity=0.018 Sum_probs=26.2
Q ss_pred ceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhcc
Q 037206 109 ETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNRD 146 (149)
Q Consensus 109 ~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~~ 146 (149)
=+++...||+.|+.-...+ ..-+.+..+.+|+++-
T Consensus 393 F~RlF~vPGm~HC~gG~g~---~~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 393 FYRLFMVPGMGHCGGGPGP---DPFDALTALVDWVENG 427 (474)
T ss_pred eeEEEecCCCcccCCCCCC---CCCCHHHHHHHHHhCC
Confidence 5899999999998855322 2237888899998863
No 283
>PF06658 DUF1168: Protein of unknown function (DUF1168); InterPro: IPR009548 This family consists of several hypothetical eukaryotic proteins of unknown function.
Probab=29.41 E-value=17 Score=24.52 Aligned_cols=10 Identities=40% Similarity=0.660 Sum_probs=8.2
Q ss_pred EEeecChhhH
Q 037206 48 FLRGNSAGGN 57 (149)
Q Consensus 48 ~l~G~SAGg~ 57 (149)
-|+|.|||+.
T Consensus 25 NV~GSSAGAG 34 (142)
T PF06658_consen 25 NVQGSSAGAG 34 (142)
T ss_pred cccccccccC
Confidence 3889999985
No 284
>PLN02606 palmitoyl-protein thioesterase
Probab=29.41 E-value=1.2e+02 Score=23.34 Aligned_cols=25 Identities=8% Similarity=-0.096 Sum_probs=22.5
Q ss_pred cccEEEeecChhhHHHHHHHHHhcc
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASF 68 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~ 68 (149)
.+-+-+.|+|-||.++-.++.++..
T Consensus 94 ~~G~naIGfSQGglflRa~ierc~~ 118 (306)
T PLN02606 94 SEGYNIVAESQGNLVARGLIEFCDN 118 (306)
T ss_pred cCceEEEEEcchhHHHHHHHHHCCC
Confidence 6789999999999999999988865
No 285
>PLN02633 palmitoyl protein thioesterase family protein
Probab=29.16 E-value=1.1e+02 Score=23.50 Aligned_cols=61 Identities=10% Similarity=-0.074 Sum_probs=39.4
Q ss_pred hhHHHHHHHHhhCCCEEEEEccCCCCCCCc--cc--------cchh-----cccEEEeecChhhHHHHHHHHHhcc
Q 037206 8 TYHNYVGSHSAKANVIVVSVDYRLAPEHLL--GK--------TLVL-----ILLVFLRGNSAGGNIVHSMAFQASF 68 (149)
Q Consensus 8 ~~~~~~~~la~~~g~~v~~vdYrlaPe~~~--p~--------~~~~-----~~~i~l~G~SAGg~La~~~~~~~~~ 68 (149)
.-..+...+..-.|..|.++.---..+..| |. +-+. .+-+-++|+|-||.++-.+..++..
T Consensus 42 g~~~~~~l~~~~~g~~~~~i~ig~~~~~s~~~~~~~Qve~vce~l~~~~~l~~G~naIGfSQGGlflRa~ierc~~ 117 (314)
T PLN02633 42 TNANFTQLLTNLSGSPGFCLEIGNGVGDSWLMPLTQQAEIACEKVKQMKELSQGYNIVGRSQGNLVARGLIEFCDG 117 (314)
T ss_pred hHHHHHHHHHhCCCCceEEEEECCCccccceeCHHHHHHHHHHHHhhchhhhCcEEEEEEccchHHHHHHHHHCCC
Confidence 344455555444577777765543334433 11 1111 6789999999999999999988865
No 286
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=28.99 E-value=50 Score=24.16 Aligned_cols=16 Identities=25% Similarity=0.337 Sum_probs=14.3
Q ss_pred EEeecChhhHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMA 63 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~ 63 (149)
.+.|-|||+-.++.++
T Consensus 34 ~i~GtSaGAl~aa~~a 49 (246)
T cd07222 34 RFAGASAGSLVAAVLL 49 (246)
T ss_pred EEEEECHHHHHHHHHh
Confidence 4899999999988886
No 287
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=28.21 E-value=50 Score=26.22 Aligned_cols=18 Identities=17% Similarity=0.392 Sum_probs=15.7
Q ss_pred EEeecChhhHHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~~ 65 (149)
++.|.|+|+-+|+.++..
T Consensus 114 ~i~GtS~Gaivaa~~a~~ 131 (391)
T cd07229 114 IITGTATGALIAALVGVH 131 (391)
T ss_pred eEEEecHHHHHHHHHHcC
Confidence 489999999999998874
No 288
>COG5425 Usg protein, probable subunit of phosphoribosylanthranilate isomerase [Amino acid transport and metabolism]
Probab=27.85 E-value=24 Score=21.29 Aligned_cols=9 Identities=67% Similarity=1.014 Sum_probs=6.2
Q ss_pred ccCCCCCCC
Q 037206 28 DYRLAPEHL 36 (149)
Q Consensus 28 dYrlaPe~~ 36 (149)
||.|||+.|
T Consensus 39 dYDlAP~FP 47 (90)
T COG5425 39 DYDLAPEFP 47 (90)
T ss_pred hcccCcccH
Confidence 677888743
No 289
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=27.85 E-value=1.5e+02 Score=24.37 Aligned_cols=37 Identities=16% Similarity=0.072 Sum_probs=28.6
Q ss_pred cccEEEeecChhhHHHHHHHHHhccCCCCCCccceEEEeccccCC
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQASFDDLNGIKLSGIYLVQPYFGR 88 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~~~~~~~~~~~~~~l~~P~~~~ 88 (149)
.++++++|-|+|-.=|+-.+.. ..|.+++.--|.+.+
T Consensus 356 ~~qLILSGlSMGTfgAlYYga~--------l~P~AIiVgKPL~NL 392 (511)
T TIGR03712 356 HDQLILSGLSMGTFGALYYGAK--------LSPHAIIVGKPLVNL 392 (511)
T ss_pred HHHeeeccccccchhhhhhccc--------CCCceEEEcCcccch
Confidence 8999999999999877766632 457788877777654
No 290
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=27.81 E-value=35 Score=25.71 Aligned_cols=13 Identities=31% Similarity=0.409 Sum_probs=12.2
Q ss_pred cccEEEeecChhh
Q 037206 44 ILLVFLRGNSAGG 56 (149)
Q Consensus 44 ~~~i~l~G~SAGg 56 (149)
+++++++|||+|+
T Consensus 211 ~~~vI~vGDs~~D 223 (277)
T TIGR01544 211 RSNIILLGDSQGD 223 (277)
T ss_pred cceEEEECcChhh
Confidence 7899999999998
No 291
>PRK15405 ethanolamine utilization protein EutL; Provisional
Probab=27.65 E-value=83 Score=22.81 Aligned_cols=35 Identities=20% Similarity=0.342 Sum_probs=26.5
Q ss_pred eCCCCeee---------eeecCCchhHHHHHHHHHHHHhcccCC
Q 037206 115 TQGEDHVF---------YLFNLDSEEAVPLMDKLASFLNRDNVF 149 (149)
Q Consensus 115 ~~g~~H~f---------~~~~~~~~~~~~~~~~i~~fl~~~~~~ 149 (149)
|.|..|+. .+..+...+.+..++...+++++..+|
T Consensus 69 ~gGaghg~~~~~G~viiIi~G~dvsdVrsAveaa~~~i~~~~~f 112 (217)
T PRK15405 69 YAGAAHASTPLAGEVIGILAGPNPAEVRAGLDAMVAFIENGAAF 112 (217)
T ss_pred ccccccCCCCCCccEEEEEeCCCHHHHHHHHHHHHHHHHhhhce
Confidence 45778987 333346778899999999999987765
No 292
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=27.31 E-value=2.6e+02 Score=23.44 Aligned_cols=62 Identities=21% Similarity=0.039 Sum_probs=41.8
Q ss_pred CchhhHHHHHHHHhhCCCEEEEEccCCCCC--CCccc------cchh--------cccEEEeecChhhHHHHHHHHHhcc
Q 037206 5 FCSTYHNYVGSHSAKANVIVVSVDYRLAPE--HLLGK------TLVL--------ILLVFLRGNSAGGNIVHSMAFQASF 68 (149)
Q Consensus 5 ~~~~~~~~~~~la~~~g~~v~~vdYrlaPe--~~~p~------~~~~--------~~~i~l~G~SAGg~La~~~~~~~~~ 68 (149)
.-+....+...|. .|-.|+.|.+.-.|+ -+.-+ +|+. ..+.+|.|.+-||-.+++++....+
T Consensus 86 GFK~dSevG~AL~--~GHPvYFV~F~p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd 163 (581)
T PF11339_consen 86 GFKPDSEVGVALR--AGHPVYFVGFFPEPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPD 163 (581)
T ss_pred CCCcccHHHHHHH--cCCCeEEEEecCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcC
Confidence 3344555555553 488888888876654 22222 5554 3489999999999999999876554
No 293
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=27.14 E-value=54 Score=24.18 Aligned_cols=17 Identities=24% Similarity=0.315 Sum_probs=14.2
Q ss_pred EeecChhhHHHHHHHHH
Q 037206 49 LRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 49 l~G~SAGg~La~~~~~~ 65 (149)
+.|-|||+-.++.++..
T Consensus 40 i~G~SAGAl~aa~~a~g 56 (249)
T cd07220 40 IYGASAGALTATALVTG 56 (249)
T ss_pred EEEEcHHHHHHHHHHcC
Confidence 78999999988887643
No 294
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=27.04 E-value=57 Score=24.36 Aligned_cols=18 Identities=22% Similarity=0.167 Sum_probs=15.0
Q ss_pred EEeecChhhHHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~~ 65 (149)
.+.|.|+|+-+++..+..
T Consensus 41 ~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 41 AIGGTSIGSFVGGLYARE 58 (269)
T ss_pred EEEEECHHHHHHHHHHcC
Confidence 389999999998888753
No 295
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=26.80 E-value=1.3e+02 Score=23.64 Aligned_cols=32 Identities=13% Similarity=0.201 Sum_probs=23.9
Q ss_pred ceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHHhc
Q 037206 109 ETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFLNR 145 (149)
Q Consensus 109 ~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl~~ 145 (149)
..++.+++++.|.. . .+..++..+.|.+|+++
T Consensus 352 ~a~l~vIp~aGH~~-~----~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 352 QHKLIELPMAGHHV-Q----EDCGEELGGIISGILSK 383 (383)
T ss_pred CCeEEEECCCCCCc-c----hhCHHHHHHHHHHHhhC
Confidence 56899999999933 2 24556788888888864
No 296
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=26.45 E-value=40 Score=24.11 Aligned_cols=19 Identities=26% Similarity=0.300 Sum_probs=15.0
Q ss_pred cccEEEeecChhhHHHHHH
Q 037206 44 ILLVFLRGNSAGGNIVHSM 62 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~ 62 (149)
.+..+++|.|||+.+....
T Consensus 115 ~~G~v~~G~SAGA~i~~~~ 133 (217)
T cd03145 115 RGGVVIGGTSAGAAVMSDT 133 (217)
T ss_pred HcCCEEEEccHHHHhhhhc
Confidence 5678999999999875544
No 297
>PRK10279 hypothetical protein; Provisional
Probab=26.31 E-value=59 Score=24.71 Aligned_cols=17 Identities=24% Similarity=0.274 Sum_probs=14.6
Q ss_pred EEeecChhhHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAF 64 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~ 64 (149)
.++|.|+|+-.++.++.
T Consensus 36 ~i~GtS~GAlvga~yA~ 52 (300)
T PRK10279 36 IVAGCSIGSLVGAAYAC 52 (300)
T ss_pred EEEEEcHHHHHHHHHHc
Confidence 48999999999888874
No 298
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=26.04 E-value=44 Score=23.61 Aligned_cols=19 Identities=26% Similarity=0.340 Sum_probs=14.9
Q ss_pred cccEEEeecChhhHHHHHH
Q 037206 44 ILLVFLRGNSAGGNIVHSM 62 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~ 62 (149)
.+..++.|.|||+.+....
T Consensus 112 ~~G~v~~G~SAGA~~~~~~ 130 (210)
T cd03129 112 ARGVVIGGTSAGAAVMGET 130 (210)
T ss_pred HcCCeEEEcCHHHHHhhhc
Confidence 4568999999999766654
No 299
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=25.94 E-value=66 Score=22.48 Aligned_cols=22 Identities=27% Similarity=0.193 Sum_probs=18.5
Q ss_pred cccEEEeecChhhHHHHHHHHH
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~ 65 (149)
..++.++|||-|..++...+..
T Consensus 108 ~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 108 DAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CCCEEEEEecchhHHHHHHhhh
Confidence 5699999999999888777655
No 300
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=25.35 E-value=65 Score=23.75 Aligned_cols=18 Identities=22% Similarity=0.174 Sum_probs=14.9
Q ss_pred EEeecChhhHHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAFQ 65 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~~ 65 (149)
.+.|-|||+-.++.++..
T Consensus 35 ~i~GtSAGAl~aa~~asg 52 (252)
T cd07221 35 MFFGASAGALHCVTFLSG 52 (252)
T ss_pred EEEEEcHHHHHHHHHHhC
Confidence 389999999988888753
No 301
>PF08874 DUF1835: Domain of unknown function (DUF1835); InterPro: IPR014973 This group of proteins are functionally uncharacterised.
Probab=24.83 E-value=55 Score=20.91 Aligned_cols=17 Identities=24% Similarity=0.475 Sum_probs=13.4
Q ss_pred EEeecChhhHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAF 64 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~ 64 (149)
++.|+|++|.|-.++-.
T Consensus 3 I~~g~s~a~sLk~a~~~ 19 (124)
T PF08874_consen 3 IVFGDSAAGSLKQALKQ 19 (124)
T ss_pred EecCcchHHHHHHHHHh
Confidence 57899999988776643
No 302
>PF10905 DUF2695: Protein of unknown function (DUF2695); InterPro: IPR024248 This bacterial family of proteins has no known function.
Probab=24.66 E-value=11 Score=20.90 Aligned_cols=33 Identities=15% Similarity=0.182 Sum_probs=18.6
Q ss_pred CCCeeeeeecCCchhHHHHHHHHHHHHhcccCC
Q 037206 117 GEDHVFYLFNLDSEEAVPLMDKLASFLNRDNVF 149 (149)
Q Consensus 117 g~~H~f~~~~~~~~~~~~~~~~i~~fl~~~~~~ 149 (149)
+..|.|-....+..+-+.-.+.+++|++++.+|
T Consensus 13 ~CdHtlr~t~~fl~~~~~~~~~vl~~l~~nGg~ 45 (53)
T PF10905_consen 13 GCDHTLRLTRQFLRQRQLDWEDVLEWLRENGGY 45 (53)
T ss_pred CCCCcHHHHHHHHHHcCCCHHHHHHHHHHcCCC
Confidence 566766443222222222237888999888765
No 303
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=24.08 E-value=1.1e+02 Score=17.58 Aligned_cols=26 Identities=15% Similarity=0.151 Sum_probs=19.5
Q ss_pred CCCCchhhHHHHHHHHhhCCCEEEEEc
Q 037206 2 GSPFCSTYHNYVGSHSAKANVIVVSVD 28 (149)
Q Consensus 2 ~s~~~~~~~~~~~~la~~~g~~v~~vd 28 (149)
|+|-+..-..++..+++. |..|+.+|
T Consensus 9 G~Gktt~~~~l~~~l~~~-g~~v~~~~ 34 (99)
T cd01983 9 GVGKTTLAANLAAALAKR-GKRVLLID 34 (99)
T ss_pred CCCHHHHHHHHHHHHHHC-CCeEEEEC
Confidence 455566667778888764 99999888
No 304
>COG2342 Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase [Carbohydrate transport and metabolism]
Probab=23.66 E-value=1.1e+02 Score=23.30 Aligned_cols=30 Identities=20% Similarity=0.347 Sum_probs=23.9
Q ss_pred hhhHHHHHHHHhhCCCEEEEEccCCCCCCCc
Q 037206 7 STYHNYVGSHSAKANVIVVSVDYRLAPEHLL 37 (149)
Q Consensus 7 ~~~~~~~~~la~~~g~~v~~vdYrlaPe~~~ 37 (149)
++.....+.+++. |--|++|||-+.|..+.
T Consensus 230 ~~~e~~Lr~l~~~-G~~V~vieY~~d~~~~~ 259 (300)
T COG2342 230 DTFEEYLRKLCRL-GKPVYVIEYALDPTDPR 259 (300)
T ss_pred hhHHHHHHHHHhc-CCcEEEEEecCCCCchh
Confidence 3444778888775 99999999999988665
No 305
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=23.62 E-value=1.2e+02 Score=23.07 Aligned_cols=33 Identities=15% Similarity=0.168 Sum_probs=22.8
Q ss_pred CCCCCCccc--cchhcccEEEeecChhhHHHHHHH
Q 037206 31 LAPEHLLGK--TLVLILLVFLRGNSAGGNIVHSMA 63 (149)
Q Consensus 31 laPe~~~p~--~~~~~~~i~l~G~SAGg~La~~~~ 63 (149)
++|..++.. ..+.....+++.||+=.|||.++-
T Consensus 236 l~~k~sL~e~~~li~~a~l~I~~DSg~~HlAaA~~ 270 (334)
T COG0859 236 LAGKTSLEELAALIAGADLVIGNDSGPMHLAAALG 270 (334)
T ss_pred cCCCCCHHHHHHHHhcCCEEEccCChHHHHHHHcC
Confidence 444444444 333388889999999999888774
No 306
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=23.30 E-value=73 Score=24.03 Aligned_cols=19 Identities=26% Similarity=0.296 Sum_probs=16.0
Q ss_pred EEeecChhhHHHHHHHHHh
Q 037206 48 FLRGNSAGGNIVHSMAFQA 66 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~~~ 66 (149)
++.|.|+|+-.+..++...
T Consensus 42 ~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 42 VIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred EEEecCHHHHHHHHHHcCC
Confidence 5899999999998888643
No 307
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=23.07 E-value=76 Score=26.85 Aligned_cols=24 Identities=21% Similarity=0.278 Sum_probs=19.5
Q ss_pred cccEEEeecChhhHHHHHHHHHhc
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQAS 67 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~ 67 (149)
..-|+-.|||+||-|+-.+.+...
T Consensus 525 ~RPivwI~HSmGGLl~K~lLlda~ 548 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLLLDAY 548 (697)
T ss_pred CCceEEEecccchHHHHHHHHHHh
Confidence 455888899999999888877655
No 308
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=22.31 E-value=71 Score=27.66 Aligned_cols=17 Identities=35% Similarity=0.489 Sum_probs=14.8
Q ss_pred EEeecChhhHHHHHHHH
Q 037206 48 FLRGNSAGGNIVHSMAF 64 (149)
Q Consensus 48 ~l~G~SAGg~La~~~~~ 64 (149)
++.|.||||-.++.++.
T Consensus 69 ~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 69 VISGTSAGGINGVLLAY 85 (739)
T ss_pred eEEeeCHHHHHHHHHHc
Confidence 48999999998888885
No 309
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=22.21 E-value=1.6e+02 Score=22.14 Aligned_cols=20 Identities=5% Similarity=0.101 Sum_probs=18.1
Q ss_pred cccEEEeecChhhHHHHHHH
Q 037206 44 ILLVFLRGNSAGGNIVHSMA 63 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~ 63 (149)
..+.+|+.||.-.|||.++-
T Consensus 251 ~a~l~I~~DSGp~HlAaA~~ 270 (334)
T TIGR02195 251 LAKAVVTNDSGLMHVAAALN 270 (334)
T ss_pred hCCEEEeeCCHHHHHHHHcC
Confidence 89999999999999988774
No 310
>PRK02399 hypothetical protein; Provisional
Probab=22.17 E-value=4.2e+02 Score=21.32 Aligned_cols=24 Identities=17% Similarity=0.108 Sum_probs=19.7
Q ss_pred cccEEEeecChhhHHHHHHHHHhc
Q 037206 44 ILLVFLRGNSAGGNIVHSMAFQAS 67 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~~~~~ 67 (149)
-+-|+-+|.|.|..|+..+...+.
T Consensus 96 i~gviglGGs~GT~lat~aMr~LP 119 (406)
T PRK02399 96 VAGVIGLGGSGGTALATPAMRALP 119 (406)
T ss_pred ccEEEEecCcchHHHHHHHHHhCC
Confidence 556899999999999998877643
No 311
>TIGR02964 xanthine_xdhC xanthine dehydrogenase accessory protein XdhC. Members of this protein family are the accessory protein XdhC for insertion of the molybdenum cofactor into the xanthine dehydrogenase large chain, XdhB, in bacteria. This protein is not part of the mature xanthine dehydrogenase. Xanthine dehydrogenase is an enzyme for purine catabolism, from other purines to xanthine to urate to further breakdown products.
Probab=21.77 E-value=1.2e+02 Score=22.22 Aligned_cols=28 Identities=29% Similarity=0.106 Sum_probs=20.8
Q ss_pred HHHHHHhhCCCEEEEEccC--CCCCCCccc
Q 037206 12 YVGSHSAKANVIVVSVDYR--LAPEHLLGK 39 (149)
Q Consensus 12 ~~~~la~~~g~~v~~vdYr--laPe~~~p~ 39 (149)
...++|+.+|+.|..+|-| ..++..+|.
T Consensus 114 ~la~la~~lGf~V~v~D~R~~~~~~~~~~~ 143 (246)
T TIGR02964 114 ALVRALAPLPCRVTWVDSREAEFPEDLPDG 143 (246)
T ss_pred HHHHHHhcCCCEEEEEeCCcccccccCCCC
Confidence 4667888899999999988 444455554
No 312
>PF08438 MMR_HSR1_C: GTPase of unknown function C-terminal; InterPro: IPR013646 This domain is found at the C terminus of IPR002917 from INTERPRO in archaeal and eukaryotic GTP-binding proteins. ; PDB: 1WXQ_A.
Probab=21.49 E-value=50 Score=21.17 Aligned_cols=45 Identities=16% Similarity=0.164 Sum_probs=13.5
Q ss_pred HhcCCCceEEEEeCCCCeeeeeecC--CchhHHHHHHHHHH-HHhccc
Q 037206 103 NCGWAGETEIVETQGEDHVFYLFNL--DSEEAVPLMDKLAS-FLNRDN 147 (149)
Q Consensus 103 ~l~~~~~v~~~~~~g~~H~f~~~~~--~~~~~~~~~~~i~~-fl~~~~ 147 (149)
.|++..+.-++.|..+...|..... ..++.+..++.|.+ |+.+..
T Consensus 36 ~Lr~a~k~g~I~Y~pGd~~F~i~~~~~l~~~q~~~Le~I~~~vl~~~g 83 (109)
T PF08438_consen 36 ALRKAAKAGLIDYIPGDSDFEITDDDKLSDKQKKALEKIRDNVLERYG 83 (109)
T ss_dssp HHHS-SSS----S----------------------TTHHHHHHTSSSS
T ss_pred HHHHHHHCCCEEeCCCCCceEeecccccCHHHHHHHHHHHHHHHHhcC
Confidence 4555555566667777777877654 46777888999999 666643
No 313
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=21.36 E-value=1.8e+02 Score=21.74 Aligned_cols=20 Identities=0% Similarity=-0.104 Sum_probs=18.2
Q ss_pred cccEEEeecChhhHHHHHHH
Q 037206 44 ILLVFLRGNSAGGNIVHSMA 63 (149)
Q Consensus 44 ~~~i~l~G~SAGg~La~~~~ 63 (149)
..+++|..||+-.|||.++-
T Consensus 254 ~a~l~I~~DSgp~HlAaa~g 273 (319)
T TIGR02193 254 GADAVVGVDTGLTHLAAALD 273 (319)
T ss_pred cCCEEEeCCChHHHHHHHcC
Confidence 89999999999999998774
No 314
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=21.29 E-value=1.3e+02 Score=21.16 Aligned_cols=31 Identities=23% Similarity=0.095 Sum_probs=22.6
Q ss_pred CCCCchhhHHHHHHHHhhCCCEEEEEccCCC
Q 037206 2 GSPFCSTYHNYVGSHSAKANVIVVSVDYRLA 32 (149)
Q Consensus 2 ~s~~~~~~~~~~~~la~~~g~~v~~vdYrla 32 (149)
|.|-+-.--+++..+|+..|..|+.||-...
T Consensus 46 G~GkSt~a~nLA~~la~~~g~~VLlvD~D~~ 76 (207)
T TIGR03018 46 GEGKSFTAINLAISLAQEYDKTVLLIDADLR 76 (207)
T ss_pred CCCHHHHHHHHHHHHHHhcCCeEEEEECCCC
Confidence 3444555667888888766999999988753
No 315
>PF08373 RAP: RAP domain; InterPro: IPR013584 The ~60-residue RAP (an acronym for RNA-binding domain abundant in Apicomplexans) domain is found in various proteins in eukaryotes. It is particularly abundant in apicomplexans and might mediate a range of cellular functions through its potential interactions with RNA []. The RAP domain consists of multiple blocks of charged and aromatics residues and is predicted to be composed of alpha helical and beta strand structures. Two predicted loop regions that are dominated by glycine and tryptophan residues are found before and after the central beta sheet []. Some proteins known to contain a RAP domain are listed below: Human hypothetical protein MGC5297, Mammalian FAST kinase domain-containing proteins (FASTKDs), Chlamydomonas reinhardtii chloroplastic trans-splicing factor Raa3.
Probab=21.21 E-value=99 Score=16.66 Aligned_cols=21 Identities=19% Similarity=0.214 Sum_probs=15.2
Q ss_pred HHHHHHHHhhCCCEEEEEccC
Q 037206 10 HNYVGSHSAKANVIVVSVDYR 30 (149)
Q Consensus 10 ~~~~~~la~~~g~~v~~vdYr 30 (149)
..+-.++-+.+|+.|+.|.|-
T Consensus 20 t~lk~r~L~~~G~~Vi~Ip~~ 40 (58)
T PF08373_consen 20 TKLKHRHLKALGYKVISIPYY 40 (58)
T ss_pred HHHHHHHHHHCCCEEEEecHH
Confidence 344455666789999999884
No 316
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=21.18 E-value=2.9e+02 Score=22.87 Aligned_cols=55 Identities=13% Similarity=0.050 Sum_probs=40.2
Q ss_pred HHHHHHhhCCCEEEEEccCCCCC-CCccc-------------------cchh----------cccEEEeecChhhHHHHH
Q 037206 12 YVGSHSAKANVIVVSVDYRLAPE-HLLGK-------------------TLVL----------ILLVFLRGNSAGGNIVHS 61 (149)
Q Consensus 12 ~~~~la~~~g~~v~~vdYrlaPe-~~~p~-------------------~~~~----------~~~i~l~G~SAGg~La~~ 61 (149)
.-..+|++.|..|+.++.|..-+ .|++. .++. +.+.+..|.|-=|.|++.
T Consensus 109 ~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW 188 (514)
T KOG2182|consen 109 TWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAW 188 (514)
T ss_pred hHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHH
Confidence 46678999999999999998753 34433 2222 448999999999988877
Q ss_pred HHHHh
Q 037206 62 MAFQA 66 (149)
Q Consensus 62 ~~~~~ 66 (149)
+=...
T Consensus 189 ~R~~y 193 (514)
T KOG2182|consen 189 FREKY 193 (514)
T ss_pred HHHhC
Confidence 75443
No 317
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=21.04 E-value=90 Score=19.34 Aligned_cols=19 Identities=16% Similarity=0.186 Sum_probs=16.1
Q ss_pred HHHHHHHhhCCCEEEEEcc
Q 037206 11 NYVGSHSAKANVIVVSVDY 29 (149)
Q Consensus 11 ~~~~~la~~~g~~v~~vdY 29 (149)
.+|+.|+++.|+.++..|-
T Consensus 14 T~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 14 TLAKELAERLGFPVISMDD 32 (121)
T ss_dssp HHHHHHHHHHTCEEEEEHH
T ss_pred HHHHHHHHHHCCeEEEecc
Confidence 4788888888999998887
No 318
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=20.76 E-value=1.4e+02 Score=18.95 Aligned_cols=30 Identities=13% Similarity=0.173 Sum_probs=20.3
Q ss_pred hhhHHHHHHHHhhCCCEEEE--EccCCCCCCCc
Q 037206 7 STYHNYVGSHSAKANVIVVS--VDYRLAPEHLL 37 (149)
Q Consensus 7 ~~~~~~~~~la~~~g~~v~~--vdYrlaPe~~~ 37 (149)
.....+...+.+. |+.|+. -+||+-++.+|
T Consensus 77 ~~~~~~~~~~~~~-g~~ViD~s~~~R~~~~~~~ 108 (121)
T PF01118_consen 77 GASKELAPKLLKA-GIKVIDLSGDFRLDDDVPY 108 (121)
T ss_dssp HHHHHHHHHHHHT-TSEEEESSSTTTTSTTSEE
T ss_pred hHHHHHHHHHhhC-CcEEEeCCHHHhCCCCCCE
Confidence 3455566666555 998887 57787776655
No 319
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=20.61 E-value=2.2e+02 Score=22.43 Aligned_cols=42 Identities=19% Similarity=0.167 Sum_probs=28.3
Q ss_pred HHHHHhcCC-CceEEEEeCC-CCeeeeeecCCchhHHHHHHHHHHHHhc
Q 037206 99 IYFENCGWA-GETEIVETQG-EDHVFYLFNLDSEEAVPLMDKLASFLNR 145 (149)
Q Consensus 99 ~~~~~l~~~-~~v~~~~~~g-~~H~f~~~~~~~~~~~~~~~~i~~fl~~ 145 (149)
.+++.+... ..++++++++ ..|.-.+ ++.++..+.|.+||++
T Consensus 344 ~la~~lp~~~~~a~l~~I~s~~GH~~~l-----e~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 344 KMVDILQKQGKYAEVYEIESINGHMAGV-----FDIHLFEKKIYEFLNR 387 (389)
T ss_pred HHHHHhhhcCCCeEEEEECCCCCcchhh-----cCHHHHHHHHHHHHcc
Confidence 344455432 3689999986 8895433 4556788888899875
No 320
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=20.58 E-value=1.2e+02 Score=23.35 Aligned_cols=37 Identities=14% Similarity=-0.010 Sum_probs=22.3
Q ss_pred CCCCchhhHHHHHHHHhhCCCEEEEEccCCC-CCCCccc
Q 037206 2 GSPFCSTYHNYVGSHSAKANVIVVSVDYRLA-PEHLLGK 39 (149)
Q Consensus 2 ~s~~~~~~~~~~~~la~~~g~~v~~vdYrla-Pe~~~p~ 39 (149)
|||-+-..+++..++-.+ +....+|+..-| -+.|||+
T Consensus 29 GSGKTTF~QrL~~hl~~~-~~ppYviNLDPAv~~vpy~a 66 (366)
T KOG1532|consen 29 GSGKTTFMQRLNSHLHAK-KTPPYVINLDPAVRNVPYPA 66 (366)
T ss_pred CCCchhHHHHHHHHHhhc-cCCCeEEeCCHHHhcCCCcc
Confidence 677778888887777654 443333333222 2567777
No 321
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=20.54 E-value=2e+02 Score=23.34 Aligned_cols=35 Identities=14% Similarity=0.238 Sum_probs=23.7
Q ss_pred ceEEEEeCCCCeeeeeecCCchhHHHHHHHHHHHH
Q 037206 109 ETEIVETQGEDHVFYLFNLDSEEAVPLMDKLASFL 143 (149)
Q Consensus 109 ~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~i~~fl 143 (149)
+..+.+.||++|+-....-..++-.++...|.+|-
T Consensus 377 ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 377 DSYVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred ceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 67777789999986554323344556777777774
No 322
>TIGR02578 cas_TM1811_Csm1 CRISPR-associated protein, Csm1 family. The family is designated Csm2, for CRISPR/Cas Subtype Mtube Protein 2. A typical example is TM1811 from Thermotoga maritima. CRISPR are Clustered Regularly Interspaced Short Palindromic Repeats. This protein family belongs to a conserved gene cluster regularly found near CRISPR repeats.
Probab=20.21 E-value=1.8e+02 Score=24.84 Aligned_cols=43 Identities=23% Similarity=0.288 Sum_probs=29.0
Q ss_pred HhcCCC-ceEEEEeCCCCeeeeeecCCchhH--HHHHHHHHHHHhcc
Q 037206 103 NCGWAG-ETEIVETQGEDHVFYLFNLDSEEA--VPLMDKLASFLNRD 146 (149)
Q Consensus 103 ~l~~~~-~v~~~~~~g~~H~f~~~~~~~~~~--~~~~~~i~~fl~~~ 146 (149)
.+++-+ +..-.+|.|++| |.+..|..++. .+..++|.+|+-++
T Consensus 289 IL~~l~L~~~nil~~gGG~-F~lLlPnt~~~~l~~~~~~in~~l~~~ 334 (648)
T TIGR02578 289 ILEELNLTRTNILFDGGGH-FYLLLPNTEEARLEKLRERIEEELLKE 334 (648)
T ss_pred HHHHcCCChhheEEecCCe-EEEEecCChHHHHHHHHHHHHHHHHHh
Confidence 344434 778889999999 77767887763 45556666666543
No 323
>PF05167 DUF711: Uncharacterised ACR (DUF711); InterPro: IPR007841 The proteins in this family are functionally uncharacterised. The proteins are around 450 amino acids long.; PDB: 2HA9_A.
Probab=20.07 E-value=1.1e+02 Score=24.52 Aligned_cols=24 Identities=21% Similarity=0.177 Sum_probs=15.1
Q ss_pred HHHHHHHhhCCCEEEEEccCCCCC
Q 037206 11 NYVGSHSAKANVIVVSVDYRLAPE 34 (149)
Q Consensus 11 ~~~~~la~~~g~~v~~vdYrlaPe 34 (149)
..++.++++.|+....+|+.|||.
T Consensus 232 ~vg~~~a~~lgv~f~giD~SLAPS 255 (399)
T PF05167_consen 232 LVGREVAERLGVPFGGIDLSLAPS 255 (399)
T ss_dssp HHHHHHHHHHTSEEEEEE------
T ss_pred HHHHHHHHHcCCCeEEEecccCCC
Confidence 445667889999999999999876
Done!