BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037207
(1989 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Y3A|A Chain A, Crystal Structure Of P110beta In Complex With Icsh2 Of
P85beta And The Drug Gdc-0941
Length = 1092
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 403 LKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKG------QRLKV 456
++ ++ S A + ++LG+GDRH DNI++ +G + HID+ +R +V
Sbjct: 920 IEEFTLSCAGYCVASYVLGIGDRHSDNIMVK-KTGQLFHIDFGHILGNFKSKFGIKRERV 978
Query: 457 PEIVPFRLTQTI-EAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWT 515
P I+ + I + G T G FR CE +LR++ ++ + L + + L E T
Sbjct: 979 PFILTYDFIHVIQQGKTGNTEKFGRFRQCCEDAYLILRRHGNLFITLFALMLTAGLPELT 1038
Query: 516 RGD----FHDDAAIGGEERKGME 534
D A+G E + ++
Sbjct: 1039 SVKDIQYLKDSLALGKSEEEALK 1061
>pdb|2X6F|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With 3-Methyladenine
pdb|2X6F|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With 3-Methyladenine
pdb|2X6H|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34
pdb|2X6H|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34
pdb|2X6I|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-kinase Vps34 In Complex With Pik-90
pdb|2X6I|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-kinase Vps34 In Complex With Pik-90
pdb|2X6J|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pik-93
pdb|2X6J|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pik-93
pdb|2X6K|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pi-103
pdb|2X6K|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pi-103
Length = 696
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 406 YSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLT 465
Y +S A ++ ++LG+GDRHLDN+LL ++G + HID+ G+ K
Sbjct: 534 YIKSCAGYCVITYLLGVGDRHLDNLLLT-TNGKLFHIDFGYIL--GRDPKPMPPPMKLSK 590
Query: 466 QTIEAALGLTG-IEGTFRANCEAVVSVLRKNKDILLMLLEVFV 507
+ +EA G++ FR C LR++ +++L L + V
Sbjct: 591 EMVEAMGGISSEHHHEFRKQCYTAYLHLRRHANVMLNLFSLMV 633
>pdb|4ANV|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors
Length = 980
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 8/124 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
F ++R+ S A + +LG+GDRH DNI++ +G++ HID+ ++ + L +
Sbjct: 783 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 841
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFVWDPL 511
E VPF LT +G +G + + F+ C LR + ++L++L + + +
Sbjct: 842 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMMLMTGM 901
Query: 512 IEWT 515
E T
Sbjct: 902 PELT 905
>pdb|3L54|A Chain A, Structure Of Pi3k Gamma With Inhibitor
Length = 966
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
F ++R+ S A + +LG+GDRH DNI++ +G++ HID+ ++ + L +
Sbjct: 779 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 837
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
E VPF LT +G +G + + F+ C LR + ++L++L + +
Sbjct: 838 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDVCVKAYLALRHHTNLLIILFSMML 893
>pdb|4DK5|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With A
Pyridyl- Triazine Inhibitor
Length = 959
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
F ++R+ S A + +LG+GDRH DNI++ +G++ HID+ ++ + L +
Sbjct: 778 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 836
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
E VPF LT +G +G + + F+ C LR + ++L++L + +
Sbjct: 837 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 892
>pdb|3ENE|A Chain A, Complex Of Pi3k Gamma With An Inhibitor
Length = 959
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
F ++R+ S A + +LG+GDRH DNI++ +G++ HID+ ++ + L +
Sbjct: 778 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 836
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
E VPF LT +G +G + + F+ C LR + ++L++L + +
Sbjct: 837 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 892
>pdb|1E8X|A Chain A, Structural Insights Into Phoshoinositide 3-Kinase
Enzymatic Mechanism And Signalling
pdb|1E90|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E7V|A Chain A, Structure Determinants Of Phosphoinositide 3-kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E8W|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
Length = 961
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
F ++R+ S A + +LG+GDRH DNI++ +G++ HID+ ++ + L +
Sbjct: 780 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIS-ETGNLFHIDFGHILGNYKSFLGIN 838
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
E VPF LT +G +G + + F+ C LR + ++L++L + +
Sbjct: 839 KERVPFVLTPDFLFVMGTSGKKTSLHFQKFQDVCVKAYLALRHHTNLLIILFSMML 894
>pdb|1E7U|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
Length = 961
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
F ++R+ S A + +LG+GDRH DNI++ +G++ HID+ ++ + L +
Sbjct: 780 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIS-ETGNLFHIDFGHILGNYKSFLGIN 838
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
E VPF LT +G +G + + F+ C LR + ++L++L + +
Sbjct: 839 KERVPFVLTPDFLFVMGTSGKKTSLHFQKFQDVCVKAYLALRHHTNLLIILFSMML 894
>pdb|1E8Y|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E8Z|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|2A4Z|A Chain A, Crystal Structure Of Human Pi3kgamma Complexed With
As604850
pdb|2A5U|A Chain A, Crystal Structure Of Human Pi3kgamma Complexed With
As605240
pdb|2CHW|A Chain A, A Pharmacological Map Of The Pi3-K Family Defines A Role
For P110 Alpha In Signaling: The Structure Of Complex Of
Phosphoinositide 3-Kinase Gamma With Inhibitor Pik-39
pdb|2CHX|A Chain A, A Pharmacological Map Of The Pi3-K Family Defines A Role
For P110alpha In Signaling: The Structure Of Complex Of
Phosphoinositide 3-Kinase Gamma With Inhibitor Pik-90
pdb|2CHZ|A Chain A, A Pharmacological Map Of The Pi3-K Family Defines A Role
For P110alpha In Signaling: The Structure Of Complex Of
Phosphoinositide 3-Kinase Gamma With Inhibitor Pik-93
pdb|3DPD|A Chain A, Achieving Multi-Isoform Pi3k Inhibition In A Series Of
Substituted 3,4-Dihydro-2h-Benzo[1,4]oxazines
pdb|2V4L|A Chain A, Complex Of Human Phosphoinositide 3-kinase Catalytic
Subunit Gamma (p110 Gamma) With Pik-284
pdb|3IBE|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Bound
To Pi3 Kinase Gamma
pdb|3LJ3|A Chain A, Pi3-Kinase-Gamma With A Pyrrolopyridine-Benzofuran
Inhibitor
pdb|3ML8|A Chain A, Discovery Of The Highly Potent Pi3kMTOR DUAL INHIBITOR
PF-0 Through Structure Based Drug Design
pdb|3ML9|A Chain A, Discovery Of The Highly Potent Pi3kMTOR DUAL INHIBITOR
PF-0 Through Structure Based Drug Design
pdb|3MJW|A Chain A, Pi3 Kinase Gamma With A Benzofuranone Inhibitor
pdb|3P2B|A Chain A, Crystal Structure Of Pi3k Gamma With
3-(2-Morpholino-6-(Pyridin-3-
Ylamino)pyrimidin-4-Yl)phenol
pdb|3SD5|A Chain A, Crystal Structure Of Pi3k Gamma With
5-(2,4-Dimorpholinopyrimidin-6-
Yl)-4-(Trifluoromethyl)pyridin-2-Amine
pdb|3TJP|A Chain A, Crystal Structure Of Pi3k Gamma With
N6-(3,4-Dimethoxyphenyl)-2-
Morpholino-[4,5'-Bipyrimidine]-2',6-Diamine
pdb|4FUL|A Chain A, Pi3 Kinase Gamma Bound To A Pyrmidine Inhibitor
Length = 966
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
F ++R+ S A + +LG+GDRH DNI++ +G++ HID+ ++ + L +
Sbjct: 779 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 837
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
E VPF LT +G +G + + F+ C LR + ++L++L + +
Sbjct: 838 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 893
>pdb|3DBS|A Chain A, Structure Of Pi3k Gamma In Complex With Gdc0941
pdb|3L13|A Chain A, Crystal Structures Of Pan-Pi3-Kinase And Dual
Pan-Pi3-KinaseMTOR Inhibitors
pdb|4AOF|A Chain A, Selective Small Molecule Inhibitor Discovered By
Chemoproteomic Assay Platform Reveals Regulation Of Th17
Cell Differentiation By Pi3kgamma
Length = 960
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
F ++R+ S A + +LG+GDRH DNI++ +G++ HID+ ++ + L +
Sbjct: 779 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 837
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
E VPF LT +G +G + + F+ C LR + ++L++L + +
Sbjct: 838 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 893
>pdb|3CST|A Chain A, Crystal Structure Of Pi3k P110gamma Catalytical Domain In
Complex With Organoruthenium Inhibitor E5e2
pdb|3CSF|A Chain A, Crystal Structure Of Pi3k P110gamma Catalytical Domain In
Complex With Organoruthenium Inhibitor Dw2
pdb|3L16|A Chain A, Discovery Of (Thienopyrimidin-2-Yl)aminopyrimidines As
Potent, Selective, And Orally Available Pan-Pi3-Kinase
And Dual Pan-Pi3- KinaseMTOR INHIBITORS FOR THE
TREATMENT OF CANCER
pdb|3L17|A Chain A, Discovery Of (Thienopyrimidin-2-Yl)aminopyrimidines As
Potent, Selective, And Orally Available Pan-Pi3-Kinase
And Dual Pan-Pi3- KinaseMTOR INHIBITORS FOR THE
TREATMENT OF CANCER
pdb|3L08|A Chain A, Structure Of Pi3k Gamma With A Potent Inhibitor:
Gsk2126458
pdb|3OAW|A Chain A, 4-Methylpteridineones As Orally Active And Selective
Pi3kMTOR DUAL Inhibitors
pdb|3PRE|A Chain A, Quinazolines With Intra-Molecular Hydrogen Bonding
Scaffold (Imhbs) As Pi3kMTOR DUAL INHIBITORS.
pdb|3PRZ|A Chain A, Quinazolines With Intra-Molecular Hydrogen Bonding
Scaffold (Imhbs) As Pi3kMTOR DUAL INHIBITORS.
pdb|3PS6|A Chain A, Quinazolines With Intra-Molecular Hydrogen Bonding
Scaffold (Imhbs) As Pi3kMTOR DUAL INHIBITORS.
pdb|3R7Q|A Chain A, Structure-Based Design Of Thienobenzoxepin Inhibitors Of
Pi3- Kinase
pdb|3R7R|A Chain A, Structure-Based Design Of Thienobenzoxepin Inhibitors Of
Pi3-Kinase
pdb|3ZVV|A Chain A, Fragment Bound To Pi3kinase Gamma
pdb|3ZW3|A Chain A, Fragment Based Discovery Of A Novel And Selective Pi3
Kinase Inhibitor
pdb|3TL5|A Chain A, Discovery Of Gdc-0980: A Potent, Selective, And Orally
Available Class I Phosphatidylinositol 3-Kinase
(Pi3k)MAMMALIAN TARGET OF RAPAMYCIN (Mtor) Kinase
Inhibitor For The Treatment Of Cancer
pdb|3T8M|A Chain A, Rational Design Of Pi3k-Alpha Inhibitors That Exhibit
Selectivity Over The Pi3k-Beta Isoform
pdb|4GB9|A Chain A, Potent And Highly Selective Benzimidazole Inhibitors Of
Pi3k-Delta
pdb|4G11|A Chain A, X-Ray Structure Of Pi3k-Gamma Bound To A
4-(Morpholin-4-Yl)- (6-Oxo-1,
6-Dihydropyrimidin-2-Yl)amide Inhibitor
pdb|4HLE|A Chain A, Compound 21 (1-alkyl-substituted 1,2,4-triazoles)
Length = 966
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
F ++R+ S A + +LG+GDRH DNI++ +G++ HID+ ++ + L +
Sbjct: 779 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 837
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
E VPF LT +G +G + + F+ C LR + ++L++L + +
Sbjct: 838 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 893
>pdb|3QAQ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Triazine-Benzimidazole 1
pdb|3QAR|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Triazine-Benzimidazole 32
pdb|3QJZ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Benzothiazole 1
pdb|3QK0|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Benzothiazole 82
pdb|3S2A|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With A
Quinoline Inhibitor
pdb|4FHJ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Imidazopyridine 2
pdb|4F1S|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With A
Pyridyl- Triazine-Sulfonamide Inhibitor
pdb|4FLH|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Amg511
pdb|4FJY|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Quinoline-Indoline Inhibitor 24f
pdb|4FJZ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Pyrrolo-Pyridine Inhibitor 63
Length = 960
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
F ++R+ S A + +LG+GDRH DNI++ +G++ HID+ ++ + L +
Sbjct: 779 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 837
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
E VPF LT +G +G + + F+ C LR + ++L++L + +
Sbjct: 838 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 893
>pdb|3APC|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Ch5132799
pdb|3APD|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Ch5108134
pdb|3APF|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Ch5039699
Length = 966
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
F ++R+ S A + +LG+GDRH DNI++ +G++ HID+ ++ + L +
Sbjct: 785 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 843
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
E VPF LT +G +G + + F+ C LR + ++L++L + +
Sbjct: 844 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 899
>pdb|1HE8|A Chain A, Ras G12v-Pi 3-Kinase Gamma Complex
Length = 965
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
F ++R+ S A + +LG+GDRH DNI++ +G++ HID+ ++ + L +
Sbjct: 778 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 836
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
E VPF LT +G +G + + F+ C LR + ++L++L + +
Sbjct: 837 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 892
>pdb|4ANU|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors.
pdb|4ANW|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors
Length = 980
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
F ++R+ S A + +LG+GDRH DNI++ +G++ HID+ ++ + L +
Sbjct: 783 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 841
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
E VPF LT +G +G + + F+ C LR + ++L++L + +
Sbjct: 842 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 897
>pdb|3NZS|A Chain A, Structure-Based Optimization Of Pyrazolo -Pyrimidine And
-Pyridine Inhibitors Of Pi3-Kinase
pdb|3NZU|A Chain A, Structure-Based Optimization Of Pyrazolo -Pyrimidine And
-Pyridine Inhibitors Of Pi3-Kinase
Length = 954
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
F ++R+ S A + +LG+GDRH DNI++ +G++ HID+ ++ + L +
Sbjct: 775 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 833
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
E VPF LT +G +G + + F+ C LR + ++L++L + +
Sbjct: 834 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 889
>pdb|4AJW|A Chain A, Discovery And Optimization Of New Benzimidazole- And
Benzoxazole- Pyrimidone Selective Pi3kbeta Inhibitors
For The Treatment Of Phosphatase And Tensin Homologue
(Pten)-Deficient Cancers
pdb|4AJW|B Chain B, Discovery And Optimization Of New Benzimidazole- And
Benzoxazole- Pyrimidone Selective Pi3kbeta Inhibitors
For The Treatment Of Phosphatase And Tensin Homologue
(Pten)-Deficient Cancers
Length = 934
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 397 KAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQ---- 452
+A ++ ++ S A + ++LG+GDRH DNI++ SG + HID+ +
Sbjct: 756 EALDRAIEEFTLSCAGYCVATYVLGIGDRHSDNIMIR-ESGQLFHIDFGHFLGNFKTKFG 814
Query: 453 --RLKVPEIVPFRLTQTIEAALGLTGIEGT---FRANCEAVVSVLRKNKDILLMLL 503
R +VP I+ + I+ G T FR CE ++LR++ + L L
Sbjct: 815 INRERVPFILTYDFVHVIQQ--GKTNNSEKFERFRGYCERAYTILRRHGLLFLHLF 868
>pdb|4ANX|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors
Length = 980
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
F ++R+ S A + +LG+GDRH DNI++ +G++ HID+ ++ + L +
Sbjct: 783 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHINGNYKSFLGIN 841
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
E VPF LT +G +G + + F+ C LR + ++L++L + +
Sbjct: 842 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 897
>pdb|2WXF|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Pik-39.
pdb|2WXG|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Sw13.
pdb|2WXH|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Sw14.
pdb|2WXI|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-kinase
P110delta In Complex With Sw30.
pdb|2WXJ|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ink654.
pdb|2WXK|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ink666.
pdb|2WXL|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Zstk474.
pdb|2WXM|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Dl06.
pdb|2WXN|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-kinase
P110delta In Complex With Dl07.
pdb|2WXO|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With As5.
pdb|2WXP|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Gdc-0941.
pdb|2WXQ|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With As15.
pdb|2WXR|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta.
pdb|2X38|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ic87114
Length = 940
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 397 KAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQ---- 452
+A ++ ++ S A + ++LG+GDRH DNI++ SG + HID+ +
Sbjct: 762 EALDRAIEEFTLSCAGYCVATYVLGIGDRHSDNIMIR-ESGQLFHIDFGHFLGNFKTKFG 820
Query: 453 --RLKVPEIVPFRLTQTIEAALGLTGIEGT---FRANCEAVVSVLRKNKDILLMLL 503
R +VP I+ + I+ G T FR CE ++LR++ + L L
Sbjct: 821 INRERVPFILTYDFVHVIQQ--GKTNNSEKFERFRGYCERAYTILRRHGLLFLHLF 874
>pdb|3LS8|A Chain A, Crystal Structure Of Human Pik3c3 In Complex With 3-[4-(4-
Morpholinyl)thieno[3,2-D]pyrimidin-2-Yl]-Phenol
pdb|3LS8|B Chain B, Crystal Structure Of Human Pik3c3 In Complex With 3-[4-(4-
Morpholinyl)thieno[3,2-D]pyrimidin-2-Yl]-Phenol
Length = 614
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Query: 406 YSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLT 465
Y +S A ++ +ILG+GDRHLDN+LL +G + HID+ + + P + +
Sbjct: 460 YVKSCAGYCVITYILGVGDRHLDNLLLT-KTGKLFHIDFGYILGRDPKPLPPPMKLNK-- 516
Query: 466 QTIEAALGLTGIEG----TFRANCEAVVSVLRKNKDILLMLLEVFV 507
E G+ G + FR C LR+ +++L L + V
Sbjct: 517 ---EMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMV 559
>pdb|3IHY|A Chain A, Human Pik3c3 Crystal Structure
pdb|3IHY|B Chain B, Human Pik3c3 Crystal Structure
pdb|3IHY|C Chain C, Human Pik3c3 Crystal Structure
pdb|3IHY|D Chain D, Human Pik3c3 Crystal Structure
pdb|3IHY|E Chain E, Human Pik3c3 Crystal Structure
Length = 600
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Query: 406 YSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLT 465
Y +S A ++ +ILG+GDRHLDN+LL +G + HID+ + + P + +
Sbjct: 446 YVKSCAGYCVITYILGVGDRHLDNLLLT-KTGKLFHIDFGYILGRDPKPLPPPMKLNK-- 502
Query: 466 QTIEAALGLTGIEG----TFRANCEAVVSVLRKNKDILLMLLEVFV 507
E G+ G + FR C LR+ +++L L + V
Sbjct: 503 ---EMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMV 545
>pdb|3ZIM|A Chain A, Discovery Of A Potent And Isoform-selective Targeted
Covalent Inhibitor Of The Lipid Kinase Pi3kalpha
Length = 940
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 11/132 (8%)
Query: 385 LHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY 444
LHQ + ++G + + + ++ S A + ILG+GDRH NI++ G + HID+
Sbjct: 771 LHQWLKDKNKG-EIYDAAIDLFTRSCAGYCVATFILGIGDRHNSNIMVK-DDGQLFHIDF 828
Query: 445 NVCFD-KGQRLKVP-EIVPFRLTQTIEAALGLTGIEGT-------FRANCEAVVSVLRKN 495
D K ++ E VPF LTQ + E T F+ C +R++
Sbjct: 829 GHFLDHKKKKFGYKRERVPFVLTQDFLIVISKGAQECTKTREFERFQEMCYKAYLAIRQH 888
Query: 496 KDILLMLLEVFV 507
++ + L + +
Sbjct: 889 ANLFINLFSMML 900
>pdb|3HHM|A Chain A, Crystal Structure Of P110alpha H1047r Mutant In Complex With
Nish2 Of P85alpha And The Drug Wortmannin
Length = 1091
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 11/132 (8%)
Query: 385 LHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY 444
LHQ + ++G + + + ++ S A + ILG+GDRH NI++ G + HID+
Sbjct: 900 LHQWLKDKNKG-EIYDAAIDLFTRSCAGYCVATFILGIGDRHNSNIMVK-DDGQLFHIDF 957
Query: 445 NVCFD-KGQRLKVP-EIVPFRLTQTIEAALGLTGIEGT-------FRANCEAVVSVLRKN 495
D K ++ E VPF LTQ + E T F+ C +R++
Sbjct: 958 GHFLDHKKKKFGYKRERVPFVLTQDFLIVISKGAQECTKTREFERFQEMCYKAYLAIRQH 1017
Query: 496 KDILLMLLEVFV 507
++ + L + +
Sbjct: 1018 ANLFINLFSMML 1029
>pdb|3HIZ|A Chain A, Crystal Structure Of P110alpha H1047r Mutant In Complex With
Nish2 Of P85alpha
Length = 1096
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 11/132 (8%)
Query: 385 LHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY 444
LHQ + ++G + + + ++ S A + ILG+GDRH NI++ G + HID+
Sbjct: 905 LHQWLKDKNKG-EIYDAAIDLFTRSCAGYCVATFILGIGDRHNSNIMVK-DDGQLFHIDF 962
Query: 445 NVCFD-KGQRLKVP-EIVPFRLTQTIEAALGLTGIEGT-------FRANCEAVVSVLRKN 495
D K ++ E VPF LTQ + E T F+ C +R++
Sbjct: 963 GHFLDHKKKKFGYKRERVPFVLTQDFLIVISKGAQECTKTREFERFQEMCYKAYLAIRQH 1022
Query: 496 KDILLMLLEVFV 507
++ + L + +
Sbjct: 1023 ANLFINLFSMML 1034
>pdb|2RD0|A Chain A, Structure Of A Human P110alpha/p85alpha Complex
Length = 1096
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 11/132 (8%)
Query: 385 LHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY 444
LHQ + ++G + + + ++ S A + ILG+GDRH NI++ G + HID+
Sbjct: 905 LHQWLKDKNKG-EIYDAAIDLFTRSCAGYCVATFILGIGDRHNSNIMVK-DDGQLFHIDF 962
Query: 445 NVCFD-KGQRLKVP-EIVPFRLTQTIEAALGLTGIEGT-------FRANCEAVVSVLRKN 495
D K ++ E VPF LTQ + E T F+ C +R++
Sbjct: 963 GHFLDHKKKKFGYKRERVPFVLTQDFLIVISKGAQECTKTREFERFQEMCYKAYLAIRQH 1022
Query: 496 KDILLMLLEVFV 507
++ + L + +
Sbjct: 1023 ANLFINLFSMML 1034
>pdb|1W1N|A Chain A, The Solution Structure Of The Fatc Domain Of The Protein
Kinase Tor1 From Yeast
pdb|2KIO|A Chain A, Nmr Structure Of The Oxidized Yeast Tor1 Fatc Domain Bound
To Dpc Micelles At 318k
pdb|2KIT|A Chain A, The Solution Struture Of The Reduced Yeast Tor1 Fatc Domain
Bound To Dpc Micelles At 298k
Length = 33
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 1959 LSIAEQVDHLLKQATSVDNLCNMYEGWTPW 1988
L + EQVD L++QATS++ LC Y GW P+
Sbjct: 3 LDVPEQVDKLIQQATSIERLCQHYIGWCPF 32
>pdb|4A55|A Chain A, Crystal Structure Of P110alpha In Complex With Ish2 Of
P85alpha And The Inhibitor Pik-108
Length = 1096
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 11/132 (8%)
Query: 385 LHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY 444
LHQ + ++G + + + ++ S A + ILG+GDRH NI++ G + HID+
Sbjct: 905 LHQWLKDKNKG-EIYDAAIDLFTRSCAGYCVATFILGIGDRHNSNIMVK-DDGQLFHIDF 962
Query: 445 NVCFD-KGQRLKVP-EIVPFRLTQTIEAALGLTGIEGT-------FRANCEAVVSVLRKN 495
D K ++ E VPF LTQ + E T F+ C +R++
Sbjct: 963 GHFLDHKKKKFGYKRERVPFVLTQDFLIVISKGAQEYTKTREFERFQEMCYKAYLAIRQH 1022
Query: 496 KDILLMLLEVFV 507
++ + L + +
Sbjct: 1023 ANLFINLFSMML 1034
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.131 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,842,896
Number of Sequences: 62578
Number of extensions: 1913852
Number of successful extensions: 4768
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 4741
Number of HSP's gapped (non-prelim): 35
length of query: 1989
length of database: 14,973,337
effective HSP length: 113
effective length of query: 1876
effective length of database: 7,902,023
effective search space: 14824195148
effective search space used: 14824195148
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)