Your job contains 1 sequence.
>037214
MNNNNEDIPEPLCEQKPSKFFGIEMHWMPAEGYAESNKESLRKIAMHQILQISKSNNLDA
MIPYAAMNIFDRFISRNEVPRMLGGMREDIVLAADACLTISWSVKSTSFSYDEFLEADNH
EYKDTDARVVRKVQLVAMEQKIDVGVDWRMRVATPISFVEFFVGIIPIGRGIKRRTLNEI
VIQTQGDISFTRFLPTVIAASAVFTACRVLFNDQYYREKENMIRRVTKYVDEVDLEACLE
DTCKMCIEKQIMLERDLESADWKKLEEEINRRLETSSSSSSFNSISNRDEEDDPQGKIDP
DMNFELKWMMLSSEDPEERTINFPDIRTLATDLDDPSDDNRAGATTFRELHISSTRCLPT
VIAAPTLFTACRYLYNGLYERKKLILVARKYVENDDLEAYLQETYKFCCGQIGATEVTEA
GETSYPNFRELKRRQCKTLKNGQFIPQISHPLFLI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 037214
(455 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2125522 - symbol:CYCD6;1 "AT4G03270" species:3... 179 2.6e-11 1
TAIR|locus:2020663 - symbol:CYCD1;1 "CYCLIN D1;1" species... 146 2.5e-07 1
TAIR|locus:2148052 - symbol:CYC3B "mitotic-like cyclin 3B... 126 6.8e-05 1
TAIR|locus:2124331 - symbol:CYCD3;1 "CYCLIN D3;1" species... 121 0.00019 1
TAIR|locus:2083128 - symbol:CYCD3;3 "AT3G50070" species:3... 118 0.00038 1
UNIPROTKB|P24385 - symbol:CCND1 "G1/S-specific cyclin-D1"... 113 0.00092 1
>TAIR|locus:2125522 [details] [associations]
symbol:CYCD6;1 "AT4G03270" species:3702 "Arabidopsis
thaliana" [GO:0004693 "cyclin-dependent protein serine/threonine
kinase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000278 "mitotic cell cycle" evidence=RCA] [GO:0010440
"stomatal lineage progression" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0045736 "negative regulation
of cyclin-dependent protein serine/threonine kinase activity"
evidence=RCA] InterPro:IPR004367 Pfam:PF02984 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007049
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 EMBL:AL161496
PROSITE:PS00292 HOGENOM:HOG000242458 EMBL:AC005275 IPI:IPI00535163
PIR:E85041 RefSeq:NP_192236.1 UniGene:At.54112
ProteinModelPortal:Q9ZR04 SMR:Q9ZR04 IntAct:Q9ZR04 STRING:Q9ZR04
EnsemblPlants:AT4G03270.1 GeneID:828000 KEGG:ath:AT4G03270
GeneFarm:3387 TAIR:At4g03270 eggNOG:NOG274061 InParanoid:Q9ZR04
OMA:GALKWRM PhylomeDB:Q9ZR04 ProtClustDB:CLSN2685933
Genevestigator:Q9ZR04 Uniprot:Q9ZR04
Length = 302
Score = 179 (68.1 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 72/249 (28%), Positives = 112/249 (44%)
Query: 2 NNNNEDIPEPLCEQKPSKFFGIEMHWMPAEGYAESNKESL-----RKIAMHQILQISKSN 56
NN N+D E P F +E MP+ Y S K S R A+ I Q S+
Sbjct: 16 NNFNDDTDY---ETLPHSLFLVEFQHMPSSHYFHSLKSSAFLLSNRNQAISSITQYSRKF 72
Query: 57 NLDAMIPYAAMNIFDRFISRNEVPRMLGGMREDIVLAADACLTISWSVKSTSFSYDEFLE 116
+ D + Y A+N DRF+S ++P+ + + I L+ C+++S ++ S + L
Sbjct: 73 D-DPSLTYLAVNYLDRFLSSEDMPQSKPWILKLISLS---CVSLSAKMRKPDMSVSD-LP 127
Query: 117 ADNHEYKDTDARVVRKVQLVAMEQKIDVGVDWRMRVATPISFVEFFVXXXXXXXXXXXXT 176
+ + DA+++ + ME I + WRMR TP SF+ FF+
Sbjct: 128 VEGEFF---DAQMIER-----MENVILGALKWRMRSVTPFSFLAFFISLFELKEEDPLLL 179
Query: 177 LNEIVIQT-------QGDISFTRFLPTVIAASAVFTACRVLFNDQYYREKENMIRRVTKY 229
+ + QT Q DISF F P+VIA +A+ A L Q+ N I + T Y
Sbjct: 180 KHSLKSQTSDLTFSLQHDISFLEFKPSVIAGAALLFASFELCPLQFPCFS-NRINQCT-Y 237
Query: 230 VDEVDLEAC 238
V++ +L C
Sbjct: 238 VNKDELMEC 246
>TAIR|locus:2020663 [details] [associations]
symbol:CYCD1;1 "CYCLIN D1;1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000278 "mitotic cell cycle" evidence=RCA] [GO:0010440
"stomatal lineage progression" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0045736 "negative regulation
of cyclin-dependent protein serine/threonine kinase activity"
evidence=RCA] InterPro:IPR004367 Pfam:PF02984 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0051301 GO:GO:0007049
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 eggNOG:COG5024
PROSITE:PS00292 EMBL:X83369 EMBL:AC002062 EMBL:AK117189
EMBL:BT005315 EMBL:AF208693 IPI:IPI00536346 PIR:A96725 PIR:S51650
RefSeq:NP_177178.1 UniGene:At.10298 ProteinModelPortal:P42751
SMR:P42751 IntAct:P42751 STRING:P42751 DNASU:843357
EnsemblPlants:AT1G70210.1 GeneID:843357 KEGG:ath:AT1G70210
GeneFarm:3378 TAIR:At1g70210 HOGENOM:HOG000242458 InParanoid:P42751
OMA:TSGWPMQ PhylomeDB:P42751 ProtClustDB:CLSN2682767
Genevestigator:P42751 GermOnline:AT1G70210 Uniprot:P42751
Length = 339
Score = 146 (56.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 49/200 (24%), Positives = 89/200 (44%)
Query: 20 FFGIEMHWMPAEGY-----AESNKESLRKIAMHQILQISKSNNLDAMIPYAAMNIFDRFI 74
F E H++P Y S S R+ ++ IL++ N + Y A+N DRF+
Sbjct: 55 FIEDERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFL 114
Query: 75 SRNEVPRMLGGMREDIVLAADACLTISWSVKSTSF-SYDEFLEADNHEYKDTDARVVRKV 133
+P G + L A ACL+++ ++ S +F A +Y +A+ ++++
Sbjct: 115 YARRLPETSGWPMQ---LLAVACLSLAAKMEEILVPSLFDFQVA-GVKYL-FEAKTIKRM 169
Query: 134 QLVAMEQKIDVGVDWRMRVATPISFVEFFVXXXXXXXXXXXXTLN---EIVIQTQGDISF 190
+L+ + +DWR+R TP F+ FF ++ EI++ + SF
Sbjct: 170 ELLVLSV-----LDWRLRSVTPFDFISFFAYKIDPSGTFLGFFISHATEIILSNIKEASF 224
Query: 191 TRFLPTVIAASAVFTACRVL 210
+ P+ IAA+A+ L
Sbjct: 225 LEYWPSSIAAAAILCVANEL 244
>TAIR|locus:2148052 [details] [associations]
symbol:CYC3B "mitotic-like cyclin 3B from Arabidopsis"
species:3702 "Arabidopsis thaliana" [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle"
evidence=IEA;IGI] [GO:0016538 "cyclin-dependent protein
serine/threonine kinase regulator activity" evidence=ISS]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008283 "cell proliferation"
evidence=IGI] [GO:2000123 "positive regulation of stomatal complex
development" evidence=IGI] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051302 "regulation of cell division"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR004367 InterPro:IPR014400 Pfam:PF02984
PIRSF:PIRSF001771 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000079 GO:GO:0051301 GO:GO:0008283
GO:GO:0007049 GO:GO:0010389 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
eggNOG:COG5024 HOGENOM:HOG000167672 KO:K06627 PROSITE:PS00292
EMBL:Z31402 EMBL:AL360314 EMBL:BT026128 IPI:IPI00546804
RefSeq:NP_568248.2 UniGene:At.1678 ProteinModelPortal:Q147G5
SMR:Q147G5 IntAct:Q147G5 STRING:Q147G5 EnsemblPlants:AT5G11300.1
GeneID:831001 KEGG:ath:AT5G11300 GeneFarm:3303 TAIR:At5g11300
InParanoid:Q147G5 OMA:CFITANT PhylomeDB:Q147G5
ProtClustDB:CLSN2690148 Genevestigator:Q147G5 GO:GO:2000123
Uniprot:Q147G5
Length = 436
Score = 126 (49.4 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 54/214 (25%), Positives = 92/214 (42%)
Query: 24 EMHWMPAEGYAESNKESL----RKIAMHQILQISKSNNLDAMIPYAAMNIFDRFISRNEV 79
E+ P Y E + + RKI + ++++S L Y +N+ DRF+S + +
Sbjct: 184 ELQQRPLANYMELVQRDIDPDMRKILIDWLVEVSDDYKLVPDTLYLTVNLIDRFLSNSYI 243
Query: 80 PRMLGGMREDIVLAADACLTISWSVKSTSFSYDEFLEADNHEYKDTDARVVRKVQLVAME 139
R + + L +C+ I+ Y+E E+ A + ++++ME
Sbjct: 244 ER------QRLQLLGVSCMLIA-------SKYEELSAPGVEEFCFITANTYTRPEVLSME 290
Query: 140 QKIDVGVDWRMRVATPISFVEFFVXXXXXXXXXXXXTL----NEIVIQTQGDISFTRFLP 195
+I V +R+ V T +F+ F+ L N + T + SF RFLP
Sbjct: 291 IQILNFVHFRLSVPTTKTFLRRFIKAAQASYKVPFIELEYLANYLAELTLVEYSFLRFLP 350
Query: 196 TVIAASAVFTACRVLFNDQYYREKENMIRRVTKY 229
++IAASAVF A L DQ ++ T+Y
Sbjct: 351 SLIAASAVFLARWTL--DQTDHPWNPTLQHYTRY 382
>TAIR|locus:2124331 [details] [associations]
symbol:CYCD3;1 "CYCLIN D3;1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI;IMP] [GO:0009744 "response to sucrose stimulus"
evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009741 "response to brassinosteroid stimulus" evidence=IGI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IGI;RCA]
[GO:0048316 "seed development" evidence=IGI] [GO:0000280 "nuclear
division" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0010075 "regulation of meristem
growth" evidence=RCA] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA] [GO:0010389 "regulation of G2/M transition of mitotic
cell cycle" evidence=RCA] [GO:0010583 "response to cyclopentenone"
evidence=RCA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0051225 "spindle assembly" evidence=RCA] InterPro:IPR004367
Pfam:PF02984 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009735 GO:GO:0051301 GO:GO:0007067 GO:GO:0000082
GO:GO:0009744 GO:GO:0042127 GO:GO:0048316 EMBL:AL021961
EMBL:AL161584 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0009741 eggNOG:COG5024 PROSITE:PS00292 HOGENOM:HOG000242458
EMBL:X83371 EMBL:AK221712 IPI:IPI00527030 PIR:T05420
RefSeq:NP_195142.1 UniGene:At.22721 ProteinModelPortal:P42753
SMR:P42753 IntAct:P42753 STRING:P42753 EnsemblPlants:AT4G34160.1
GeneID:829564 KEGG:ath:AT4G34160 GeneFarm:3380 TAIR:At4g34160
InParanoid:P42753 KO:K14505 OMA:ALYCEEE PhylomeDB:P42753
ProtClustDB:CLSN2684389 Genevestigator:P42753 GermOnline:AT4G34160
Uniprot:P42753
Length = 376
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 47/228 (20%), Positives = 107/228 (46%)
Query: 42 RKIAMHQILQISKSNNLDAMIPYAAMNIFDRFISRNEVPRMLGGMREDIVLAADACLTIS 101
RK A+ IL+++ + A+ D+FI + R M + L + ACL+++
Sbjct: 87 RKEAVGWILRVNAHYGFSTLAAVLAITYLDKFICSYSLQRDKPWMLQ---LVSVACLSLA 143
Query: 102 WSVKSTSFSYDEFLEADNHEYKDTDARVVRKVQLVAMEQKIDVGVDWRMRVATPISFVEF 161
V+ T + + +Y +A+ +++++L+ + ++W+M + TPISFV+
Sbjct: 144 AKVEETQVPLLLDFQVEETKYV-FEAKTIQRMELLILST-----LEWKMHLITPISFVDH 197
Query: 162 FVXXXXXXXXXXXXTLNE---IVIQTQGDISFTRFLPTVIAASAVFTACRVL--FNDQYY 216
+ LN+ +++ D F +LP+V+AA+ + + F+ Y
Sbjct: 198 IIRRLGLKNNAHWDFLNKCHRLLLSVISDSRFVGYLPSVVAAATMMRIIEQVDPFDPLSY 257
Query: 217 REKENMIRRVTKYVDEVDLEACLEDTCKMCIEKQIMLERDLESADWKK 264
+ + +TK ++V + C + ++ +++ I L+ ++S+ +K
Sbjct: 258 QTNLLGVLNLTK--EKV--KTCYDLILQLPVDR-IGLQIQIQSSKKRK 300
>TAIR|locus:2083128 [details] [associations]
symbol:CYCD3;3 "AT3G50070" species:3702 "Arabidopsis
thaliana" [GO:0004693 "cyclin-dependent protein serine/threonine
kinase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0042127 "regulation of cell proliferation"
evidence=IGI;RCA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048316 "seed development" evidence=IGI] [GO:0000278 "mitotic
cell cycle" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0010440 "stomatal lineage progression"
evidence=RCA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=RCA] InterPro:IPR004367
Pfam:PF02984 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0051301 GO:GO:0042127 GO:GO:0048316 GO:GO:0007049
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 eggNOG:COG5024
PROSITE:PS00292 HOGENOM:HOG000242458 KO:K14505
ProtClustDB:CLSN2684389 EMBL:AL132978 EMBL:AY052665 EMBL:AY063729
EMBL:AY087498 IPI:IPI00548883 PIR:T45860 RefSeq:NP_190576.1
UniGene:At.26490 ProteinModelPortal:Q9SN11 SMR:Q9SN11 IntAct:Q9SN11
STRING:Q9SN11 EnsemblPlants:AT3G50070.1 GeneID:824169
KEGG:ath:AT3G50070 GeneFarm:3382 TAIR:At3g50070 InParanoid:Q9SN11
OMA:CEEESEF PhylomeDB:Q9SN11 Genevestigator:Q9SN11 Uniprot:Q9SN11
Length = 361
Score = 118 (46.6 bits), Expect = 0.00038, P = 0.00038
Identities = 44/204 (21%), Positives = 90/204 (44%)
Query: 42 RKIAMHQILQISKSNNLDAMIPYAAMNIFDRFISRNEVPRMLGGMREDIVLAADACLTIS 101
R+ A+ I ++ +++ A+N FDRFI+ + M + L A ACL+++
Sbjct: 86 REKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDKPWMSQ---LTALACLSLA 142
Query: 102 WSVKSTSFSYDEFLEADNHEYKDTDARVVRKVQLVAMEQKIDVGVDWRMRVATPISFVEF 161
V+ + + + Y +A+ +++++L+ + +DWRM TPISF +
Sbjct: 143 AKVEEIRVPFLLDFQVEEARYV-FEAKTIQRMELLVLST-----LDWRMHPVTPISFFDH 196
Query: 162 FVXXXXXXXXXXXXTLNE---IVIQTQGDISFTRFLPTVIAASAVFTACRVL--FNDQYY 216
+ L+ +++ D F F P+V+A + + + R L ++ Y
Sbjct: 197 IIRRYSFKSHHQLEFLSRCESLLLSIIPDSRFLSFSPSVLATAIMVSVIRDLKMCDEAVY 256
Query: 217 REKENMIRRVTKYVDEVDLEACLE 240
++ + + K VD + C E
Sbjct: 257 ---QSQLMTLLK-VDSEKVNKCYE 276
>UNIPROTKB|P24385 [details] [associations]
symbol:CCND1 "G1/S-specific cyclin-D1" species:9606 "Homo
sapiens" [GO:0051301 "cell division" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IEA] [GO:0030857 "negative
regulation of epithelial cell differentiation" evidence=IEA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IEA] [GO:0031100 "organ regeneration" evidence=IEA]
[GO:0032026 "response to magnesium ion" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033197 "response to
vitamin E" evidence=IEA] [GO:0033327 "Leydig cell differentiation"
evidence=IEA] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA] [GO:0033601 "positive regulation of
mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0043627 "response to estrogen stimulus" evidence=IEA]
[GO:0045444 "fat cell differentiation" evidence=IEA] [GO:0045471
"response to ethanol" evidence=IEA] [GO:0051412 "response to
corticosterone stimulus" evidence=IEA] [GO:0051592 "response to
calcium ion" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0060749 "mammary gland
alveolus development" evidence=IEA] [GO:2000045 "regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0000320
"re-entry into mitotic cell cycle" evidence=IEA] [GO:0001889 "liver
development" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0005923 "tight junction" evidence=IEA]
[GO:0007595 "lactation" evidence=IEA] [GO:0010039 "response to iron
ion" evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0010243 "response to organic nitrogen" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IDA;TAS] [GO:0031571 "mitotic G1 DNA damage checkpoint"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0000080 "G1 phase of mitotic
cell cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell
cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0005622 "intracellular" evidence=IDA] [GO:0070141
"response to UV-A" evidence=IDA] [GO:0001934 "positive regulation
of protein phosphorylation" evidence=IDA] [GO:0045737 "positive
regulation of cyclin-dependent protein kinase activity"
evidence=IDA] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0000307 "cyclin-dependent protein kinase holoenzyme complex"
evidence=IDA] InterPro:IPR004367 InterPro:IPR014400 Pfam:PF02984
PIRSF:PIRSF001771 GO:GO:0005829
Pathway_Interaction_DB:pi3kplctrkpathway
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0005654 Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0051301 GO:GO:0016020
GO:GO:0033327 GO:GO:0051592 GO:GO:0051412 GO:GO:0042493
GO:GO:0045471 GO:GO:0033197 GO:GO:0000082 GO:GO:0031100
GO:GO:0001889 GO:GO:0004672 Pathway_Interaction_DB:trkrpathway
GO:GO:0010039 GO:GO:0043627 GO:GO:0060749 GO:GO:0033601
GO:GO:0010243 Pathway_Interaction_DB:ar_pathway DrugBank:DB01169
GO:GO:0070141 GO:GO:0045444 GO:GO:0030968 GO:GO:0000084
GO:GO:0010165 GO:GO:0030178 GO:GO:0060070 GO:GO:0007595
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 Orphanet:67038
GO:GO:0000080 Orphanet:52416 Pathway_Interaction_DB:foxm1pathway
GO:GO:0031571 GO:GO:0000307 GO:GO:0016538 GO:GO:0030857
eggNOG:COG5024 PROSITE:PS00292 CTD:595 HOGENOM:HOG000008182
HOVERGEN:HBG050837 KO:K04503 OMA:MKETVPL OrthoDB:EOG4JWVF1
GO:GO:0033598 GO:GO:0045737 GO:GO:0000320 EMBL:X59798 EMBL:M74092
EMBL:M64349 EMBL:M73554 EMBL:Z23022 EMBL:BT019845 EMBL:AF511593
EMBL:BC000076 EMBL:BC001501 EMBL:BC014078 EMBL:BC023620
EMBL:BC025302 EMBL:L09054 IPI:IPI00028098 PIR:A38977
RefSeq:NP_444284.1 UniGene:Hs.523852 PDB:2W96 PDB:2W99 PDB:2W9F
PDB:2W9Z PDBsum:2W96 PDBsum:2W99 PDBsum:2W9F PDBsum:2W9Z
ProteinModelPortal:P24385 SMR:P24385 DIP:DIP-123N IntAct:P24385
MINT:MINT-135422 STRING:P24385 PhosphoSite:P24385 DMDM:116152
PRIDE:P24385 DNASU:595 Ensembl:ENST00000227507 GeneID:595
KEGG:hsa:595 UCSC:uc001opa.3 GeneCards:GC11P069455 HGNC:HGNC:1582
HPA:CAB000024 MIM:168461 MIM:254500 neXtProt:NX_P24385
PharmGKB:PA75 InParanoid:P24385 PhylomeDB:P24385
Pathway_Interaction_DB:p38gammadeltapathway BindingDB:P24385
ChEMBL:CHEMBL3610 ChiTaRS:CCND1 EvolutionaryTrace:P24385
GenomeRNAi:595 NextBio:2419 ArrayExpress:P24385 Bgee:P24385
CleanEx:HS_CCND1 Genevestigator:P24385 GermOnline:ENSG00000110092
GO:GO:0032026 Uniprot:P24385
Length = 295
Score = 113 (44.8 bits), Expect = 0.00092, P = 0.00092
Identities = 59/239 (24%), Positives = 96/239 (40%)
Query: 40 SLRKIAMHQILQISKSNNLDAMIPYAAMNIFDRFISRNEVPRMLGGMREDIVLAADACLT 99
S+RKI +L++ + + + AMN DRF+S V + + L C+
Sbjct: 55 SMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKK------SRLQLLGATCMF 108
Query: 100 ISWSVKSTSFSYDEFLEADNHEYKDTDARVVRKVQLVAMEQKIDVGVDWRMRVATPISFV 159
++ +K T E L Y D +R +L+ ME + + W + TP F+
Sbjct: 109 VASKMKETIPLTAEKLCI----YTDNS---IRPEELLQMELLLVNKLKWNLAAMTPHDFI 161
Query: 160 EFFVXXXXXXXXXXXXTLNE---IVIQTQGDISFTRFLPTVIAASAVFTACRVLFNDQYY 216
E F+ V D+ F P+++AA +V A + L N
Sbjct: 162 EHFLSKMPEAEENKQIIRKHAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGL-N---L 217
Query: 217 REKENMIR--RVTKYVDEVDLEACLEDTCKMCIEK-QIMLERDLESA----DWKKLEEE 268
R N + R+T+++ V C D + C E+ + +LE L A D K EEE
Sbjct: 218 RSPNNFLSYYRLTRFLSRVI--KCDPDCLRACQEQIEALLESSLRQAQQNMDPKAAEEE 274
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 455 431 0.00086 118 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 614 (65 KB)
Total size of DFA: 282 KB (2148 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.64u 0.11s 33.75t Elapsed: 00:00:01
Total cpu time: 33.65u 0.12s 33.77t Elapsed: 00:00:01
Start: Sat May 11 04:19:31 2013 End: Sat May 11 04:19:32 2013