BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037216
(379 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 298 bits (764), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 177/310 (57%), Positives = 223/310 (71%), Gaps = 22/310 (7%)
Query: 92 KPSLIIIILILAITVFLSISLCLLLRHLNRRCLRHLSTVTTVSSA-----DSRRVSSRRV 146
KPS+++IILIL +T+ +S+S+C LLR LNR R + +++ SS DSRR S RV
Sbjct: 25 KPSVLVIILILLMTLLISVSICFLLRCLNRCSHRSVLPLSSSSSVATVTSDSRRFSGHRV 84
Query: 147 SPDNPAFSVMDSLPLFAFSSVSRRSSS--GGDCAICLFKFEPHDQLRLLPLCCHAFHARC 204
SP+ SV+DSLP+F FSSV+RRSSS GDCA+CL KFEP DQLRLLPLCCHAFHA C
Sbjct: 85 SPETERSSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADC 144
Query: 205 IDTWLESNLTCPLCRSPIIATETDVMKA---IHASSGGGSDSFRLEIGSISRRQAGNEPP 261
ID WL SN TCPLCRSP+ A+E+D+MK+ + +++GGG +SFRLEIGSISRR+ P
Sbjct: 145 IDIWLVSNQTCPLCRSPLFASESDLMKSLAVVGSNNGGGENSFRLEIGSISRRRQTPIPE 204
Query: 262 GEPQRRSYSLGSFDYVVDE-ESDITTSQIHRGSMSDKEEVGAQAAS--------EANLAS 312
Q R+YS+GSFDY+VD+ +S+I+ S +RG D A A + EA+LA+
Sbjct: 205 SVEQHRTYSIGSFDYIVDDVDSEISESNFNRGKQEDATTTTATATAVTTNPTSFEASLAA 264
Query: 313 EVA--AGRSWLKDYVDRLSFSVSSRAMSFRSSGRFFTGSSRQS-DVGDYDMETNRVGEEI 369
++ RSWLKDYVDRLS +SSRAMSFRSSGRFFTGSSR+S ++ D+E N GEEI
Sbjct: 265 DIGNDGSRSWLKDYVDRLSRGISSRAMSFRSSGRFFTGSSRRSEELTVMDLEANHAGEEI 324
Query: 370 SEFFRWFSGV 379
SE FRW SGV
Sbjct: 325 SELFRWLSGV 334
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 141/313 (45%), Gaps = 73/313 (23%)
Query: 91 LKPSLIIIILILAITVFLSISLCLLLRHLNRRCLRHLSTVTT--------VSSADSRRVS 142
+ P+++ +I+ILA+ F+S L LL+R L ++H S + +S++D+ +
Sbjct: 41 ISPAVLFVIVILAVLFFISGLLHLLVRFL----IKHPSATASSRSNRFPEISTSDALQRQ 96
Query: 143 SRRVSPDNPAF---SVMDSLPLFAFSSVSRRSSSGG---------DCAICLFKFEPHDQL 190
+++ N + + +D+LP+F + + + GG DCA+CL +F D+L
Sbjct: 97 LQQLFHLNDSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKL 156
Query: 191 RLLPLCCHAFHARCIDTWLESNLTCPLCR----SPIIATET------DVMKAIHASSGGG 240
RLLP+C HAFH CIDTWL+SN TCPLCR SP + E D+ + + G
Sbjct: 157 RLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFSPGFSMENPMFDFDDIREDEEGVTENG 216
Query: 241 SDSFRLEIGSI------------SRRQAGNEPPGEPQ---------------RRSYSLGS 273
S +EI I ++ N G+ Q RR +S+GS
Sbjct: 217 SQK-TMEIQEIVVEKGVLPVRLGKFKRLDNVGNGQGQDVVAGGETSSSNLDARRCFSMGS 275
Query: 274 FDYVVDE---ESDITTSQIHRGSMSDK--EEVGAQAASEANLASEVAAGRS------WLK 322
+ Y++ + ++ R DK E+ G ++ + + VA G S WL
Sbjct: 276 YQYILGNSELKVPFANDRLPRLKPQDKESEQTGNSSSEDNKKINTVAKGESFSVSKIWLW 335
Query: 323 DYVDRLSFSVSSR 335
D+ S R
Sbjct: 336 PKKDKFSSDAQRR 348
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 95.5 bits (236), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 93/185 (50%), Gaps = 25/185 (13%)
Query: 51 LFHSFSPL--SSSSSLTPPPYDLFTYNNTQHSHHRSLSSMENLKPSLIIIILILAITVFL 108
+F F PL S +S+ TPPP+ R+ + N +PSL ++ +LAI L
Sbjct: 4 IFFFFLPLLHSYASAQTPPPF-------------RNGDLVANFEPSLAVVTGVLAIMFAL 50
Query: 109 SISLCLLLR--HLNRRCLRHLSTVTTVSSADSRRVSSRRVSPDNPAFSVMD-----SLPL 161
+ L + + H++ R + + R + + FS +D SLPL
Sbjct: 51 TFVLLVYAKCCHIDLRS--GSGDRRRHDRRLRQGIFFNRSTASSDRFSGLDKTAIESLPL 108
Query: 162 FAFSSVSRRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLESNLTCPLCRSP 221
F FS++ + S G DC++CL KFE + LRLLP C HAFH CID WLE + TCPLCR
Sbjct: 109 FRFSAL-KGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDR 167
Query: 222 IIATE 226
+ E
Sbjct: 168 VSMEE 172
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 89/168 (52%), Gaps = 24/168 (14%)
Query: 59 SSSSSLTPPPYDLFTYNNTQHSHHRSLSSMENLKPSLIIIILILAITVFLSISLCLLLRH 118
+++ S +P P DL T H+ PS + +L FL+ L + +RH
Sbjct: 26 ANAQSFSPSPPDL----QTGHT------------PSKTTVFAVLVTLFFLTGLLSVYIRH 69
Query: 119 LNRRCLRHLSTVTTVSSADSRRVSSRRVSPDNPAFSVMDSLPLFAFSSV--SRRSSSGGD 176
R + + T + SSRR DN +V++S P+FA+SSV S+ S +
Sbjct: 70 CARS---NPDSSTRYFRNRANDGSSRRGGLDN---AVVESFPVFAYSSVKESKIGSKDLE 123
Query: 177 CAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLESNLTCPLCRSPIIA 224
CAICL + E H+ +RLLP+C H FH CIDTWL S+ TCP+CRS + A
Sbjct: 124 CAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNLTA 171
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 75/134 (55%), Gaps = 2/134 (1%)
Query: 95 LIIIILILAITVFLSISLCLLLRHLNRRCLRHLSTVTTVSSADSRRVSSRRVSPDNPAFS 154
++++I +L + +F + + R N + R +T + A+S+ V RR++
Sbjct: 51 VVVVITVLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAE 110
Query: 155 VMDSLPLFAFSSVS--RRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLESN 212
+++ P F +S V R G +CA+CL +FE + LRL+P CCH FHA C+D WL +
Sbjct: 111 AIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEH 170
Query: 213 LTCPLCRSPIIATE 226
TCPLCR+ ++ +
Sbjct: 171 STCPLCRADLVLNQ 184
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 112/230 (48%), Gaps = 26/230 (11%)
Query: 72 FTYNNTQHSHHRSLSSMEN--LKPSLIIIILILAITVFLSISLCLLLRHLNRRCLRHLST 129
F + Q +H S S ++ P++ I++++L F + +R RCL +
Sbjct: 38 FKFVAGQATHGGSDVSGDSSRFDPTMAILMIVLVSVFFFLGFFSVYIR----RCLERVMG 93
Query: 130 VTTVSSADSRR-VSSRRVSPDNPAFSVMDSLPLFAFSSVS--RRSSSGGDCAICLFKFEP 186
+ + D+ +++ R S++++ P F +S+V R +C++CL +FE
Sbjct: 94 MDYGNPNDAGNWLATNRQQARGLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFED 153
Query: 187 HDQLRLLPLCCHAFHARCIDTWLESNLTCPLCRSPIIATETDVMKAIHASSGGGSDSFRL 246
+ LRL+P CCH FH CID WL S+ TCPLCR+ +I + + +I
Sbjct: 154 DETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCRADLIPVPGESIVSI------------- 200
Query: 247 EIGSISRRQAGNEPPGEPQRRSYSLGSFDYVVDEESDITTSQ-IHRGSMS 295
+I + G++P G+ R SLGS D + E +T +Q + R SMS
Sbjct: 201 QIPGLVNDPPGSDPNGD---RIRSLGSPDARLIESVALTCNQSMPRRSMS 247
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 73/128 (57%), Gaps = 6/128 (4%)
Query: 98 IILILAITVFLSISLCLLLRHLNRRCLRHLSTVTTVSSADSRRVSSRRVSPDNPAFSVMD 157
II+I+ ++VF ++ C+ + RRCL+H + + ++ R+ + SV++
Sbjct: 41 IIMIVLVSVFFALG-CISVYM--RRCLQHALGMDS-GGGPGNWLNVRQTTEPGLDASVIE 96
Query: 158 SLPLFAFSSVS--RRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLESNLTC 215
+ P F +S+V R +C +CL +FE + LRL+P CCH FH CID WL S TC
Sbjct: 97 TFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTC 156
Query: 216 PLCRSPII 223
PLCR+ ++
Sbjct: 157 PLCRANLV 164
>sp|Q9FIR0|ATL30_ARATH RING-H2 finger protein ATL30 OS=Arabidopsis thaliana GN=ATL30 PE=2
SV=1
Length = 289
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 70/138 (50%), Gaps = 12/138 (8%)
Query: 92 KPSLIIIILILAITVFL----SISLCLLLRH-LNRRCLRHLSTVTTVSSADSRRVSSRRV 146
KP L+II+ ++ + VF +I C H L H + +++ +
Sbjct: 22 KPPLVIILTVILLVVFFIGFFAIYFCKCFYHTLTEAWNHHYHNGLPENQIQAQQEPVQ-- 79
Query: 147 SPDNPAFS--VMDSLPLFAFSSVS--RRSSSGGDCAICLFKFEP-HDQLRLLPLCCHAFH 201
P NP ++ S PLF FSSV R G +CAICL +FE H LRLL C H FH
Sbjct: 80 PPVNPGLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEHILLRLLTTCYHVFH 139
Query: 202 ARCIDTWLESNLTCPLCR 219
CID WLESN TCP+CR
Sbjct: 140 QECIDQWLESNKTCPVCR 157
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 8/109 (7%)
Query: 154 SVMDSLPLFAFSSVSRRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLESNL 213
SV++SLP+F F ++S G +CA+CL +FEP + LRLLP C HAFH C+DTWL+++
Sbjct: 124 SVIESLPVFRFGALSGHKD-GLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHS 182
Query: 214 TCPLCRSPIIATETDVMKAIHASSGGGSDSFRLEIGSISRRQAGNEPPG 262
TCPLCR + + ++ G + F L+ N PPG
Sbjct: 183 TCPLCRYRVDPEDILLI-------GDCNSWFELQFSKDESNSVNNNPPG 224
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 51/71 (71%)
Query: 154 SVMDSLPLFAFSSVSRRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLESNL 213
S++D+LP+F + S+ S DC +CL +FE D+LRLLP C HAFH CIDTWL S+
Sbjct: 103 SLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHS 162
Query: 214 TCPLCRSPIIA 224
TCPLCRS +++
Sbjct: 163 TCPLCRSNLLS 173
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 75/133 (56%), Gaps = 4/133 (3%)
Query: 91 LKPSLIIIILILAITVFLSISLCLLLRHLNR---RCLRHLSTVTTVSSADSRRVSSR-RV 146
+ P +++ I +L+I F++ + LL++ L+R R +T S+A R +R +
Sbjct: 32 ISPIVLLYITLLSIIFFVAALIHLLVKFLHRPQTRLDDAYDGITESSTALQGRYQTRFNL 91
Query: 147 SPDNPAFSVMDSLPLFAFSSVSRRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCID 206
S +D+LPL + ++ DCA+CL +F D+LRLLP C HAFH CID
Sbjct: 92 HDAEIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECID 151
Query: 207 TWLESNLTCPLCR 219
TWL +N TCPLCR
Sbjct: 152 TWLLTNSTCPLCR 164
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 37/157 (23%)
Query: 91 LKPSLIIIILILAITVFLSISLCLLLRHLNRRCLRHLSTVTTVSSADSRRVSSRRVSPDN 150
+ P ++ II++L++ F+ L LL+R+ ++ +LS SS S N
Sbjct: 49 ISPIILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLS-------------SSPNESNQN 95
Query: 151 PAFS-----------------------VMDSLPLFAFSSVSRRSSSGGDCAICLFKFEPH 187
P FS ++D+LP+F + + + + DCA+CL +F
Sbjct: 96 PEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEI-KGTKEPFDCAVCLCEFSED 154
Query: 188 DQLRLLPLCCHAFHARCIDTWLESNLTCPLCRSPIIA 224
D+LRLLP C HAFH CIDTWL SN TCPLCR + +
Sbjct: 155 DKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFS 191
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 46/218 (21%)
Query: 62 SSLTPPPYDLFTYNNTQHSHHRSLSSMENLKPSLIIIILILAITVFLSISLCLLLRHLNR 121
S+ +PPP +L+ ++ KPSL II + +I L+ L + +
Sbjct: 21 SAQSPPPPNLYATSDL-------------FKPSLAIITGVFSIVFTLTFVLLVYAK---- 63
Query: 122 RCLRHLSTVTTVSSADSRRV------------SSRRVSPDNPAFSVMDSLPLFAFSSVSR 169
C + + + + +D R+ SSR D A ++SLP F FS++ +
Sbjct: 64 -CFHN--DLRSETDSDGERIRHDRLWQGLFNRSSRFSGLDKKA---IESLPFFRFSAL-K 116
Query: 170 RSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLESNLTCPLCRS--------P 221
G +C++CL KFE + LRLLP C HAFH CID WLE + TCPLCR+
Sbjct: 117 GLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIEDDLS 176
Query: 222 IIATETDVMKAIHASSGGGSDSFRLEIGSISRRQAGNE 259
++ + ++ ++ S DS RLEI I R + N+
Sbjct: 177 VLGNSSTSLRILNQSETREEDS-RLEI-YIEREEGTND 212
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 77/149 (51%), Gaps = 21/149 (14%)
Query: 154 SVMDSLPLFAFSSVSRRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLESNL 213
+ +D+LP+F + +V+ DCA+CL +F D+LRLLP+C HAFH CIDTWL SN
Sbjct: 184 TAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNS 243
Query: 214 TCPLCR-----SPIIATETDVMKAI---HASSGGGSDSFRLEIGSI--SRRQAGNEPPGE 263
TCPLCR S + ++ + A H G S + S+ R ++ NE +
Sbjct: 244 TCPLCRRSLSTSNVCYNHSETLVAPLSGHQQVDDGKASLAKRVFSVRLGRFKSTNESQSQ 303
Query: 264 PQ-----------RRSYSLGSFDYVVDEE 281
RR YS+G+ Y+V ++
Sbjct: 304 RHDVKDEIGVRMPRRCYSMGTQQYLVCDQ 332
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 7/132 (5%)
Query: 91 LKPSLIIIILILAITVFLSISLCLLLRHLNRRCLRHLSTVTTVSSADSRRVSSRRVSPDN 150
L P++ +I++IL +F + RH + +S S + ++R +
Sbjct: 45 LSPAMAVIVVILIAALFFMGFFSIYFRHCSGVPDAGVSPAGGARSRATVNAAARGLD--- 101
Query: 151 PAFSVMDSLPLFAFSSVSRRSSSGGD--CAICLFKFEPHDQLRLLPLCCHAFHARCIDTW 208
SV+++ P F +S V + G+ CAICL +FE + LRLLP C H FH CID W
Sbjct: 102 --VSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAW 159
Query: 209 LESNLTCPLCRS 220
LE+++TCP+CR+
Sbjct: 160 LEAHVTCPVCRA 171
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 85.1 bits (209), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 47/66 (71%)
Query: 154 SVMDSLPLFAFSSVSRRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLESNL 213
S +D+LP+F + S+ + DCA+CL +FE D+LRLLP C HAFH CIDTWL S+
Sbjct: 111 SFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHS 170
Query: 214 TCPLCR 219
TCPLCR
Sbjct: 171 TCPLCR 176
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 15/167 (8%)
Query: 75 NNTQHSHHRSLSSMENLKPSLIIIILILA-----ITVF-LSISLCLLLRHLNRRCLRHLS 128
N+ HHRS ++ P+ +++++ L +TVF + I+ C R RR R +
Sbjct: 28 NDDTSKHHRS-ATAGGFTPTTVVVLVALITAFVLLTVFSVLINRCAQARAPPRRAFRSTA 86
Query: 129 TVTTVSSADSRRVSSRRVSPDNPAFSVMDSLPLFAFSSVSRRSSSGG---DCAICLFKFE 185
+ V A + +SR + + V+++ P + V R ++ +CA+CL +F
Sbjct: 87 SHQPVGGAAAASRASRGLDKE-----VVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFA 141
Query: 186 PHDQLRLLPLCCHAFHARCIDTWLESNLTCPLCRSPIIATETDVMKA 232
D+LR+LP CCH FH CID WL + +TCPLCR+ + A + A
Sbjct: 142 DSDELRVLPACCHVFHPDCIDPWLAAAVTCPLCRANLTAPPVSLAAA 188
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 6/133 (4%)
Query: 90 NLKPSLIIIILILAITVFLSISLCLLLRHLNRRCLRHLSTVTTVSSADSRRVSSRRVSPD 149
N P++II +L+ + +F ++ C+ ++ N H ++ T +RR S
Sbjct: 43 NQVPAVIIAMLMFTL-LFSMLACCVCYKYTNTS--PHGTSSDTEEGGHGEVAFTRRTS-R 98
Query: 150 NPAFSVMDSLPLFAFSSVS--RRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDT 207
V++S P F +S V + G +CAICL +FE + LRL+P C HAFHA CID
Sbjct: 99 GLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDV 158
Query: 208 WLESNLTCPLCRS 220
WL S TCP+CR+
Sbjct: 159 WLSSRSTCPVCRA 171
>sp|O64762|ATL38_ARATH RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2
SV=1
Length = 302
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 69/127 (54%), Gaps = 6/127 (4%)
Query: 95 LIIIILILAITVFLSISLCLLLRHLNRRCLRHLSTVTTVSSADSRRVSSRRVSPDNPAFS 154
L+I I++ AI + S+C R +R+ S S R S V + A
Sbjct: 16 LVITIILFAIFIVGLASVCF--RWTSRQFYSQESINPFTDSDVESRTSITAVRGLDEA-- 71
Query: 155 VMDSLPLFAFSSVS-RRSSSGG-DCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLESN 212
+++S P F +S V RR GG +CA+C+ +FE H+ LRL+P CCH FHA C+ WL +
Sbjct: 72 IINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDH 131
Query: 213 LTCPLCR 219
TCPLCR
Sbjct: 132 STCPLCR 138
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 13/135 (9%)
Query: 90 NLKPSLIIIILILAITVFLSISLCLLLRHLNRRCLRHLSTVTTVSSADSRRVSSRRVSPD 149
NL II I++LAI + L + C CL + + +A + SR +
Sbjct: 45 NLSADSIIAIVVLAIFISLGMVSC---------CLHCIFYREEIGAAGQDVLHSR--ARR 93
Query: 150 NPAFSVMDSLPLFAFSSVS--RRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDT 207
V++S P F +S V + G +CAICL +FE + LR +P C H FHA CID
Sbjct: 94 GLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDV 153
Query: 208 WLESNLTCPLCRSPI 222
WL S TCP+CR+ +
Sbjct: 154 WLSSWSTCPVCRANL 168
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 76 NTQHSHHRSLSSMENLKPSLIIIILILAITVFLSISLCLLLRHLNRRCLRHLSTVTTVSS 135
T H + +L P++ ++++++ +F + +RH C + T +
Sbjct: 26 GTPDQRHDPYAYSGSLSPAMAVVVVVVIAALFFMGFFTVYIRH----CTGAVDGSVTPAG 81
Query: 136 ADSRRVSSRRVSPDNPAFSVMDSLPLFAFSSVSRRSSSGG--DCAICLFKFEPHDQLRLL 193
RRV++ V+ A +++ P F +S V + G +CAICL +FE + LRLL
Sbjct: 82 GARRRVTNATVARGLDA-ETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLL 140
Query: 194 PLCCHAFHARCIDTWLESNLTCPLCRS--------PIIATETDV 229
P C H FH CI WL+ ++TCP+CR+ P + ETD+
Sbjct: 141 PKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQTPEPEVVVETDL 184
>sp|O49691|ATL29_ARATH RING-H2 finger protein ATL29 OS=Arabidopsis thaliana GN=ATL29 PE=3
SV=1
Length = 289
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Query: 95 LIIIILILAITVFLSISLCLLLRHLNRRCLRHLSTVTTVSSADSRRVSSRRVSPDNPAFS 154
L +I+L+ F ++ C + R TVS ++ + V+P
Sbjct: 27 LTVILLVFFFIGFFTLYFCKCFLDTMVQAWRLHHGGDTVSDNPLQQPEAPPVNP-GLELR 85
Query: 155 VMDSLPLFAFSSVS--RRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLESN 212
+++S P F +SSV R G +CAICL +F+ LRLL C H FH CID W ES+
Sbjct: 86 IINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLLTTCYHVFHQECIDLWFESH 145
Query: 213 LTCPLCR 219
TCP+CR
Sbjct: 146 RTCPVCR 152
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 9/81 (11%)
Query: 154 SVMDSLPLFAFSS--------VSRRSSSG-GDCAICLFKFEPHDQLRLLPLCCHAFHARC 204
SV+ +LPLF +S+ V + S++ DCA+CL +FE D +R LPLC HAFH C
Sbjct: 124 SVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLEC 183
Query: 205 IDTWLESNLTCPLCRSPIIAT 225
ID WL S+ CPLCR+ I+ +
Sbjct: 184 IDEWLRSHPNCPLCRTAILGS 204
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 13/135 (9%)
Query: 90 NLKPSLIIIILILAITVFLSISLCLLLRHLNRRCLRHLSTVTTVSSADSRRVSSRRVSPD 149
N +I I++LAI + LS+ C L + R V +A SR +
Sbjct: 45 NFPTETVIAIIVLAIFISLSMVACFLHKTFYR---------AEVEAASQEVFHSR--ARR 93
Query: 150 NPAFSVMDSLPLFAFSSVS--RRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDT 207
+++S P+F +S V + G +CAICL +F + LR +P C H FHA CID
Sbjct: 94 GLEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDV 153
Query: 208 WLESNLTCPLCRSPI 222
WL S TCP CR+ +
Sbjct: 154 WLSSQSTCPACRANL 168
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 8/175 (4%)
Query: 74 YNNTQHSHHR-SLSSMENLKPSLIIIILILAITVFLSISLCLLLRHLNRRCLRHLSTVTT 132
+ N H R SL+ L +I+ + ++ I F S + L R R R + + +
Sbjct: 12 WGNMNHGSSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHLRS 71
Query: 133 VSSADSRRVSSRRVSPDNPAFSVMDSLPLFAFSSVSRRSSSGGDCAICLFKFEPHDQLRL 192
+++A SS +SP +P +V++ +P+F +S V S +C++CL +FE D+ R+
Sbjct: 72 LAAARDPTQSSSSLSPLDP--TVLEKIPIFVYS-VKTHESPLEECSVCLSEFEEDDEGRV 128
Query: 193 LPLCCHAFHARCIDTWLESNLTCPLCRSPI----IATETDVMKAIHASSGGGSDS 243
LP C H FH CIDTW S +CPLCR+P+ TE + + A+ S D+
Sbjct: 129 LPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDT 183
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 75/128 (58%), Gaps = 10/128 (7%)
Query: 102 LAITVFLSISLCLLLRH--LNRRCLRHLSTVTTVS-----SADSRRVSSRRVSPDNPAF- 153
+A+ L+ +L L+ + +++ C RH T ++ + + + S++R+S +
Sbjct: 59 IALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLN 118
Query: 154 -SVMDSLPLFAFSSVSRRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLESN 212
S++ S+ ++ + S G DC++CL +FE ++ LRLLP C HAFH CIDTWL+S+
Sbjct: 119 ESMIKSITVYKYKS-GDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSH 177
Query: 213 LTCPLCRS 220
CPLCR+
Sbjct: 178 SNCPLCRA 185
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 154 SVMDSLPLFAFSSVSRRSSSGGD-CAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLESN 212
+V+D +P+F +SS + + C++CL +FE D+ RLLP C H+FH CIDTW S
Sbjct: 84 AVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSR 143
Query: 213 LTCPLCRSPI 222
TCPLCR+P+
Sbjct: 144 STCPLCRAPV 153
>sp|Q9LM69|ATL80_ARATH RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1
SV=1
Length = 197
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 100 LILAITVFLSISLCLLLRHLNRRC--LRHLSTVTTVSSADSRRVSSRRVSPDNPAFS--V 155
L++ + L +C+L RC LR L+ S + V+ N V
Sbjct: 30 LVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRTVSGSQTQSPQPPVAAANKGLKKKV 89
Query: 156 MDSLPLFAFSSVSRRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLESNLTC 215
+ SLP FS S S +CAICL +F D+LR+LP C H FH CIDTWL S+ +C
Sbjct: 90 LQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSC 149
Query: 216 PLCRSPII 223
P CR ++
Sbjct: 150 PSCRQILV 157
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 78/158 (49%), Gaps = 28/158 (17%)
Query: 134 SSADSRRVSSRRVSPDNPAFSVMDSLPLFAFSSVSRRSSSGGDCAICLFKFEPHDQLRLL 193
S+A + V+SR + P+ V+ SLP+F FS + + +CA+CL +FE + R+L
Sbjct: 83 STAATSVVASRGLDPN-----VIKSLPVFTFSDETHKDPI--ECAVCLSEFEESETGRVL 135
Query: 194 PLCCHAFHARCIDTWLESNLTCPLCRS------------------PIIATETDVMKAIHA 235
P C H FH CID W S+ TCPLCRS +IA ++D + I
Sbjct: 136 PNCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEP 195
Query: 236 SSGGGSDSFRLEIGS--ISRRQAGNEPPG-EPQRRSYS 270
SS G GS + R +G +P E RR++S
Sbjct: 196 SSSSGLTDEPHGSGSSQMLREDSGRKPAAIEVPRRTFS 233
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 155 VMDSLPLFAFSSVS--RRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLESN 212
V++S P F +S V + + G +CAICL +FE + LR +P C H FHA CID WL S
Sbjct: 96 VIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDEWLSSR 155
Query: 213 LTCPLCRS 220
TCP+CR+
Sbjct: 156 STCPVCRA 163
>sp|P0C034|ATL10_ARATH RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2
SV=1
Length = 251
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 68 PYDLFTYNNTQHSHHRSLSSM----ENLKPSLIIIILILAITVFLSISLCLLLRHLNRRC 123
P+D +NTQ + + S + NL ++++++ IL + + L ++R RR
Sbjct: 31 PFD----HNTQRAFAVAPSPLITHENNLSGNVMMLLSILICGIICCLGLHYIIRCALRRS 86
Query: 124 LRHLSTVTTVSSADSRRVSSRRVSPDNPAFSVMDSLPLFAFSSVSRRSSSGGDCAICLFK 183
R + + S + +R S++ + + P+ ++S +C ICL
Sbjct: 87 TRFMISEPVPSLSSTRGSSNKGIKKK-----ALRMFPVVSYSPEMNLPGLDEECVICLSD 141
Query: 184 FEPHDQLRLLPLCCHAFHARCIDTWLESNLTCPLCRSPIIATETDVM 230
F +QLRLLP C H FH RCID WL+ +LTCP CR+ ++ T ++
Sbjct: 142 FVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVETCQKIL 188
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%)
Query: 174 GGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLESNLTCPLCRSPII 223
G +C++CL +FE + LRLLP C HAFH CIDTWL S+ CPLCR+P++
Sbjct: 132 GTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVL 181
>sp|Q9LUZ9|ATL63_ARATH RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2
SV=1
Length = 308
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%)
Query: 154 SVMDSLPLFAFSSVSRRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLESNL 213
SV+ S+PLF + +C ICL +E D R L C H FH CID WL S+
Sbjct: 115 SVISSIPLFVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHS 174
Query: 214 TCPLCRSPIIATETD 228
TCPLCRSP++A +D
Sbjct: 175 TCPLCRSPVLAAVSD 189
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 154 SVMDSLPLFAF------SSVSRRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDT 207
S + ++P+F F + +S + +C++CL +F+ ++LR++P CCH FH CID
Sbjct: 105 SAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDI 164
Query: 208 WLESNLTCPLCRSPIIATETDVMKAIHASS 237
WL+ N CPLCR+ + + + I A S
Sbjct: 165 WLQGNANCPLCRTSVSCEASFTLDLISAPS 194
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 19/177 (10%)
Query: 63 SLTPPPYDLFTYNNTQHSHHRSLSSMENLKPSLIIIILILAITVFLSISLCLLLRHLNRR 122
+ +PPP + N ++S NL P +I I I A L+ L+ ++
Sbjct: 36 NFSPPPISYEQFLND------GVASNPNLSPLVIAIFGIFATAFLLAAYYTLVSKYCAND 89
Query: 123 CLRHLSTVTTVSSADSRRVSSRRVSPDNPAFSVMDS--------LPLFAFSSVSRRSS-- 172
++ + S S R D+P F++ S + F + + +
Sbjct: 90 TTNEAASESGRSDIILDVNSPERGDQDDP-FALESSTAGLDDTLIKKIGFFKLKKHQNGF 148
Query: 173 --SGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLESNLTCPLCRSPIIATET 227
+G DC+ICL +F + LRLLP C H FH CID WL+S+ CPLCR+ II T
Sbjct: 149 KINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIVPTT 205
>sp|Q6NML0|ATL76_ARATH E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana GN=ATL76
PE=1 SV=1
Length = 225
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 90 NLKPSLIIIILILAITVFLSISLCLLLRHLNRRCLRHLSTVTTVSSADSRRVSSRRVSPD 149
NLK ++++++ +L + + L ++R RR R + + S + R S++ +
Sbjct: 53 NLKGNVLMLLSVLICGIICCLGLHYIIRCAFRRSSRFMISEPISSLSTPRSSSNKGIKK- 111
Query: 150 NPAFSVMDSLPLFAFSSVSRRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWL 209
+ P+ ++S G +C ICL F +QLRLLP C H FH RCID WL
Sbjct: 112 ----KALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWL 167
Query: 210 ESNLTCPLCRSPIIATETDVM 230
+ +LTCP CR ++ T ++
Sbjct: 168 QHHLTCPKCRHCLVETCQKIL 188
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 112/256 (43%), Gaps = 58/256 (22%)
Query: 93 PSLIIIILILAITVFLSISLCLLLRHLNRRCLRHLSTVTTVSSADSRRVSSRRVSPDNPA 152
P LI +I ILA L L+ ++ +RR RH S+ T S+A R+SS
Sbjct: 58 PLLIALIGILASAFILVSYYTLISKYCHRR--RHNSSST--SAAAINRISSDYTWQGTNN 113
Query: 153 F----------------------SVMDSLPLFAFSSVSRRSSSGGDCAICLFKFEPHDQL 190
S++ S+ ++ + + S DC++CL +F+ ++ L
Sbjct: 114 NNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESS-DCSVCLSEFQENESL 172
Query: 191 RLLPLCCHAFHARCIDTWLESNLTCPLCRSPIIA---------TETDVMKAIHASSGGGS 241
RLLP C HAFH CIDTWL+S+ CPLCR+ I+ T ++ ++ S G
Sbjct: 173 RLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIVTENNSISTGDD 232
Query: 242 DSFRLEI---GSISRRQAGNE-----PP-------GEPQRRSYSLGSFDYVVDEESDITT 286
+ + S SR + NE PP GE +RRS SL S VV +
Sbjct: 233 SVVVVNLDLENSRSRNETVNEGSTPKPPEMQDSRDGE-ERRSASLNSGGGVV------SI 285
Query: 287 SQIHRGSMSDKEEVGA 302
+ I R D+E G
Sbjct: 286 ADILREIEDDEESAGV 301
>sp|Q8LC69|ATL8_ARATH RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2
SV=2
Length = 185
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 20/137 (14%)
Query: 95 LIIIILILAITV---FLSISLCLLLRHL---NRRCLRHLSTVTTVSSADSRRVSSRRVSP 148
LI+ +L+ A+T +++S C LR + NR H V + ++V
Sbjct: 30 LILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQTHPPPVAAANKGLKKKV------- 82
Query: 149 DNPAFSVMDSLPLFAFSSVSRRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDTW 208
+ SLP +S S + +CAICL +F D+LR+LP C H FH CIDTW
Sbjct: 83 -------LRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTW 135
Query: 209 LESNLTCPLCRSPIIAT 225
L S+ +CP CR ++ T
Sbjct: 136 LGSHSSCPSCRQILVVT 152
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 176 DCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLESNLTCPLCRSPI 222
DC +CL +FE + LRLLP C HAFH CIDTWL S+ CPLCR+ I
Sbjct: 176 DCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGI 222
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 28/157 (17%)
Query: 91 LKPSLIIIILILAITVFLSISLCLLLRHL------------------NRRCLRHLSTVTT 132
L ++ + I IL + +F + RH +R R LST
Sbjct: 46 LDSTMALTIFILLVALFFMGFFSVYFRHFADSSSSTVDISSMPRTRSSRMSPRRLSTSVV 105
Query: 133 VSSADSRRVSSRRVSPDNPAFSVMDSLPLFAFSSVSRRSSSGGDCAICLFKFEPHDQLRL 192
VS R S R D+ A + SLP++ ++ +++ + DC ICL FE + +++
Sbjct: 106 VS-----RPYSFRRGLDSQA---VRSLPVYRYTKAAKQRNE--DCVICLSDFEEGETVKV 155
Query: 193 LPLCCHAFHARCIDTWLESNLTCPLCRSPIIATETDV 229
+P C H FH C+DTWL S +TCPLCRS + ++ D+
Sbjct: 156 IPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLFSDKDL 192
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 7/129 (5%)
Query: 93 PSLIIIILILAITVFLSISLCLLLRHLNRRCLRHLSTVTTVSSADSRRVSSRRVSPDNPA 152
P +++ +L +F L + L L L T + + P+N
Sbjct: 22 PVTVVLTGVLLFVIFAGFFSLFLWQFL----LNRLFTTWNLQRTPYGDLIHVATPPENTG 77
Query: 153 FS--VMDSLPLFAFSSVSRRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLE 210
++ S P+F +SS ++++ G +CAICL +F D +RL+ +C H FH+ CID W E
Sbjct: 78 LDPFIIRSFPVFHYSSATKKNH-GTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFE 136
Query: 211 SNLTCPLCR 219
+ TCP+CR
Sbjct: 137 LHKTCPVCR 145
>sp|Q9LS99|ATL77_ARATH RING-H2 finger protein ATL77 OS=Arabidopsis thaliana GN=ATL77 PE=2
SV=1
Length = 220
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 7/162 (4%)
Query: 75 NNTQHSHHRSLSSMENLKPSLIIIILILAITVFLSISLCLLLRHLNRRCLRHLSTVTTVS 134
+N Q +H + NL ++++++ IL + S+ L ++R R R +S
Sbjct: 35 HNAQQAH---VPDKNNLSGNVLMLLSILLCGIICSLGLHYIIRCAFIRS-RSFMISDPIS 90
Query: 135 SADSRRVSSRRVSPDNPAFSVMDSLPLFAFSSVSRRSSSGGDCAICLFKFEPHDQLRLLP 194
+ R SS A + LP+ +S G +C ICL F +QLR+LP
Sbjct: 91 IPSTPRDSSVNKGIKKKALKM---LPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLP 147
Query: 195 LCCHAFHARCIDTWLESNLTCPLCRSPIIATETDVMKAIHAS 236
C H FH RCID WL ++TCP CR ++ T V+ A+
Sbjct: 148 KCNHGFHLRCIDKWLTQHMTCPKCRHCLVDTCQKVLSDCDAA 189
>sp|Q94BY6|ATL75_ARATH RING-H2 finger protein ATL75 OS=Arabidopsis thaliana GN=ATL75 PE=2
SV=1
Length = 226
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 9/165 (5%)
Query: 68 PYDLFTYNNTQHSHHRSLSSMENLKPSLIIIILILAITVFLSISLCLLLRHLNRRCLRHL 127
P+D +NTQ + + S + + +L +L+L + I CL L ++ R R
Sbjct: 32 PFD----HNTQRAFAVAPSPLITHENNLSGNVLMLLSVLICGIICCLGLHYIIRCAFRRT 87
Query: 128 ST--VTTVSSADSRRVSSRRVSPDNPAFSVMDSLPLFAFSSVSRRSSSGGDCAICLFKFE 185
S+ ++ + S S + A + P+ ++S G +C ICL F
Sbjct: 88 SSFMISEPIAGLSTPCGSSNKGINKKALRM---FPVVSYSPEMNLPGLGEECVICLSDFV 144
Query: 186 PHDQLRLLPLCCHAFHARCIDTWLESNLTCPLCRSPIIATETDVM 230
+Q+R+LP C H FH RCID WL+ +LTCP CR ++ T ++
Sbjct: 145 SGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRHCLVETCQKIL 189
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 176 DCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLESNLTCPLCRSPI 222
DC++CL +F + LRLLP C HAFH +CIDTWL+S+ CPLCR+ I
Sbjct: 156 DCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANI 202
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Query: 150 NPAFSVMDSLPLFAFSSVSRRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWL 209
NP S++ SLP+F FS+V+ + +C++CL +F+ ++ R++P C H FH CID W
Sbjct: 53 NP--SIIKSLPIFTFSAVT--ALFAMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWF 108
Query: 210 ESNLTCPLCRSPI 222
S+ +CPLCRS I
Sbjct: 109 HSHSSCPLCRSQI 121
>sp|Q4KLR8|ZNRF3_XENLA E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis GN=znrf3 PE=2
SV=1
Length = 784
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 44/82 (53%), Gaps = 11/82 (13%)
Query: 152 AFSVMDSLPLFAFSSVSRRSSSGG----------DCAICLFKFEPHDQLRLLPLCCHAFH 201
A M++ A VSR S GG DCAICL K+ ++LR++P C H FH
Sbjct: 167 ALEKMETRKFKAKGKVSREGSCGGLDTLSSSSISDCAICLEKYIDGEELRVIP-CTHRFH 225
Query: 202 ARCIDTWLESNLTCPLCRSPII 223
RC+D WL N TCP CR II
Sbjct: 226 KRCVDPWLLQNHTCPHCRHNII 247
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 156 MDSLPLFAFSSVSRRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLESNLTC 215
+ SLP+ F S + G +C+ICL + D+ RLLP C H+FH CID W +S+ TC
Sbjct: 108 LSSLPIVFFRQDSCKD--GLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTC 165
Query: 216 PLCRSPIIATE 226
P+CR+ ++ E
Sbjct: 166 PICRNTVLGPE 176
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 155 VMDSLPLFAFSSVSRRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLESNLT 214
V+ SLP F + +G +CA+CL E D R+LP C H FH C+DTWL + T
Sbjct: 80 VIASLPTFVVGI--KNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQST 137
Query: 215 CPLCRS 220
CP+CR+
Sbjct: 138 CPVCRT 143
>sp|Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41
PE=1 SV=1
Length = 236
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 150 NPAFSVMDSLPLFAFSSVSRRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWL 209
NP +V+ SLP F + ++S +CA+CL + D+ R LP C H FH C+DTWL
Sbjct: 83 NP--TVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWL 140
Query: 210 ESNLTCPLCRSPI 222
+ TCP+CR+ +
Sbjct: 141 TTCSTCPVCRTEV 153
>sp|Q6NQG7|ATL78_ARATH RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2
SV=1
Length = 219
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 19/172 (11%)
Query: 100 LILAITVFLSISLCLL-LRHLNRRCLRHLSTVTTVSSADSRRVSSRRVSPDNPAFSVMDS 158
+++ ++V L +C L L + R LR + V + + D+ V R++ + S
Sbjct: 56 VVMVLSVLLCALVCSLGLNSIIRCALRCSNLVPSEAGGDNYPV---RLTNTGVKRKALKS 112
Query: 159 LPLFAFSSVSRRSSSGGDCAICLFKFEPHDQLRLLPLCCHAFHARCIDTWLESNLTCPLC 218
++S+ +CAICL +F ++++LLP C H FH RCID WL S+ +CP C
Sbjct: 113 FQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTC 172
Query: 219 RSPIIATETDVMKAIHASSGGGS----DSFRLEIGSISRRQAGNEPPGEPQR 266
R +I T + SS + DS L+I P EP+R
Sbjct: 173 RHCLIQTCEKIADCSQTSSLNSTQPPQDSIILQIA-----------PLEPER 213
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.132 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,460,309
Number of Sequences: 539616
Number of extensions: 5290390
Number of successful extensions: 15361
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 299
Number of HSP's successfully gapped in prelim test: 144
Number of HSP's that attempted gapping in prelim test: 14841
Number of HSP's gapped (non-prelim): 519
length of query: 379
length of database: 191,569,459
effective HSP length: 119
effective length of query: 260
effective length of database: 127,355,155
effective search space: 33112340300
effective search space used: 33112340300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)