BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037219
(109 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225463946|ref|XP_002268010.1| PREDICTED: uncharacterized protein LOC100241002 [Vitis vinifera]
Length = 467
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/71 (49%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 40 VGFKFRVCCLKWLALAEHIVAYLGSHGVCSEEFDVGLQTNILPLKGHDIGQFLGLESMEK 99
+G L +ALA HI Y S G +EF VGL PL+GHDIGQF GL S E+
Sbjct: 397 MGSSLEAASLSGMALANHIADYFQSGGARPDEFAVGLHNEFHPLEGHDIGQFPGLGSKEQ 456
Query: 100 V-EAQAYQPAT 109
EAQAYQ +T
Sbjct: 457 TDEAQAYQLST 467
>gi|224130614|ref|XP_002328333.1| predicted protein [Populus trichocarpa]
gi|222838048|gb|EEE76413.1| predicted protein [Populus trichocarpa]
Length = 496
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/141 (37%), Positives = 60/141 (42%), Gaps = 49/141 (34%)
Query: 18 KENFPTATAEKVKTGLVY-VVMAVG---------FKFRV--------------------- 46
+EN PTATAEKVKTG++ V A+G F RV
Sbjct: 356 QENIPTATAEKVKTGMLEGVEAALGLPKDSLQQPFYSRVQLWGAALPTNTPGIPCIFDPH 415
Query: 47 ----CCLKWL-------------ALAEHIVAYLGSHGVCSEEFDVGLQTNILPLKGHDIG 89
C WL ALA HI YL S G EEF +GL L+GHDIG
Sbjct: 416 GRAGICGDWLLGSNLESAALSGMALANHIADYLRSGGARPEEFALGLNKEFQTLEGHDIG 475
Query: 90 QFLGLESMEKVEA-QAYQPAT 109
QF GLES QAYQ +T
Sbjct: 476 QFSGLESSTGASPIQAYQLST 496
>gi|296087896|emb|CBI35179.3| unnamed protein product [Vitis vinifera]
Length = 518
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 40 VGFKFRVCCLKWLALAEHIVAYLGSHGVCSEEFDVGLQTNILPLKGHDIGQFLGLESMEK 99
+G L +ALA HI Y S G +EF VGL PL+GHDIGQF GL S E+
Sbjct: 397 MGSSLEAASLSGMALANHIADYFQSGGARPDEFAVGLHNEFHPLEGHDIGQFPGLGSKEQ 456
Query: 100 V-EAQAYQ 106
EAQAYQ
Sbjct: 457 TDEAQAYQ 464
>gi|18396966|ref|NP_566235.1| FAD/NAD(P)-binding oxidoreductase domain-containing protein
[Arabidopsis thaliana]
gi|6175169|gb|AAF04895.1|AC011437_10 unknown protein [Arabidopsis thaliana]
gi|15215628|gb|AAK91359.1| AT3g04650/F7O18_13 [Arabidopsis thaliana]
gi|28416461|gb|AAO42761.1| At3g04650/F7O18_13 [Arabidopsis thaliana]
gi|332640593|gb|AEE74114.1| FAD/NAD(P)-binding oxidoreductase domain-containing protein
[Arabidopsis thaliana]
Length = 486
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 47/146 (32%), Positives = 62/146 (42%), Gaps = 49/146 (33%)
Query: 10 HGLELGAKKENFPTATAEKVKTGLVY-VVMAVGF-----------KFRV----------- 46
+G + +EN PT TAEKVK G++ V +A+G + ++
Sbjct: 339 YGKQNKVPQENIPTVTAEKVKAGMLQGVEIALGLPEGSLPKPVYTRLQLWGAALPKNTPA 398
Query: 47 ------------CCLKWL-------------ALAEHIVAYLGSHGVCSEEFDVGLQTNIL 81
C WL AL HI +L + EEF +GL +
Sbjct: 399 VPCIFDPQGRAGICGDWLLGSNLESAAISGAALGNHIAEFLQNGEANPEEFAIGLHDRLS 458
Query: 82 PLKGHDIGQFLGLESM-EKVEAQAYQ 106
PL GHDIGQF GL S+ EK EA AYQ
Sbjct: 459 PLAGHDIGQFPGLTSVGEKEEANAYQ 484
>gi|297828968|ref|XP_002882366.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
gi|297328206|gb|EFH58625.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/146 (31%), Positives = 62/146 (42%), Gaps = 49/146 (33%)
Query: 10 HGLELGAKKENFPTATAEKVKTGLVY-VVMAVGF-----------KFRV----------- 46
+G + +EN PT TAEKV+ G++ V +A+G + ++
Sbjct: 338 YGKQNKVPQENIPTVTAEKVRAGMLQGVEIALGLPEGSLPKPVYTRLQLWGAALPKNTPA 397
Query: 47 ------------CCLKWL-------------ALAEHIVAYLGSHGVCSEEFDVGLQTNIL 81
C WL AL HI +L + EEF +GL +
Sbjct: 398 VPCIFDPQGRAGICGDWLLGSNLESAALSGAALGNHIAEFLQNGEANPEEFAIGLHDRLS 457
Query: 82 PLKGHDIGQFLGLESM-EKVEAQAYQ 106
PL GHDIGQF GL S+ EK EA AYQ
Sbjct: 458 PLDGHDIGQFPGLTSVGEKEEANAYQ 483
>gi|115489414|ref|NP_001067194.1| Os12g0597400 [Oryza sativa Japonica Group]
gi|77556443|gb|ABA99239.1| expressed protein [Oryza sativa Japonica Group]
gi|113649701|dbj|BAF30213.1| Os12g0597400 [Oryza sativa Japonica Group]
gi|215701342|dbj|BAG92766.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 497
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 41 GFKFRVCCLKWLALAEHIVAYLGSHGVCSEEFDVGLQTNILPLKGHDIGQFLGLESMEKV 100
G L ++LA HI Y S G EEF +GL N+ ++GHDIGQF GLES +
Sbjct: 428 GSSIEAAVLSGMSLANHIADYFASSGEQPEEFAIGLHENLSQVEGHDIGQFPGLESQKPH 487
Query: 101 EAQA-YQPAT 109
A+A P+T
Sbjct: 488 VAEAQLTPST 497
>gi|125537277|gb|EAY83765.1| hypothetical protein OsI_38983 [Oryza sativa Indica Group]
Length = 497
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 41 GFKFRVCCLKWLALAEHIVAYLGSHGVCSEEFDVGLQTNILPLKGHDIGQFLGLESMEKV 100
G L ++LA HI Y S G EEF +GL N+ ++GHDIGQF GLES +
Sbjct: 428 GSSIEAAVLSGMSLANHIADYFASSGEQPEEFAIGLHENLSQVEGHDIGQFPGLESQKPH 487
Query: 101 EAQA-YQPAT 109
A+A P+T
Sbjct: 488 VAEAQLTPST 497
>gi|108862915|gb|ABG22072.1| expressed protein [Oryza sativa Japonica Group]
Length = 456
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 41 GFKFRVCCLKWLALAEHIVAYLGSHGVCSEEFDVGLQTNILPLKGHDIGQFLGLESMEKV 100
G L ++LA HI Y S G EEF +GL N+ ++GHDIGQF GLES +
Sbjct: 387 GSSIEAAVLSGMSLANHIADYFASSGEQPEEFAIGLHENLSQVEGHDIGQFPGLESQKPH 446
Query: 101 EAQA-YQPAT 109
A+A P+T
Sbjct: 447 VAEAQLTPST 456
>gi|222617407|gb|EEE53539.1| hypothetical protein OsJ_36748 [Oryza sativa Japonica Group]
Length = 481
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 41 GFKFRVCCLKWLALAEHIVAYLGSHGVCSEEFDVGLQTNILPLKGHDIGQFLGLESMEKV 100
G L ++LA HI Y S G EEF +GL N+ ++GHDIGQF GLES +
Sbjct: 412 GSSIEAAVLSGMSLANHIADYFASSGEQPEEFAIGLHENLSQVEGHDIGQFPGLESQKPH 471
Query: 101 EAQA-YQPAT 109
A+A P+T
Sbjct: 472 VAEAQLTPST 481
>gi|147823103|emb|CAN66330.1| hypothetical protein VITISV_000598 [Vitis vinifera]
Length = 2691
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 57 HIVAYLGSHGVCSEEFDVGLQTNILPLKGHDIGQFLGLESMEKV-EAQAYQPAT 109
I Y S G +EF VGL PL+GHDIGQF GL S E++ EAQAYQ +T
Sbjct: 2638 QIADYFQSGGARPDEFAVGLHKEFHPLEGHDIGQFPGLGSKEQMDEAQAYQLST 2691
>gi|148908141|gb|ABR17186.1| unknown [Picea sitchensis]
Length = 175
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%)
Query: 40 VGFKFRVCCLKWLALAEHIVAYLGSHGVCSEEFDVGLQTNILPLKGHDIGQFLGLESMEK 99
+G L +ALA I Y S G +EF +GL P+ GHDIGQF G E ++K
Sbjct: 105 LGSSLEAAALSGMALAHQIADYCASGGSNPDEFGMGLHKEFTPIGGHDIGQFPGSELLKK 164
Query: 100 VEAQAYQPA 108
++ + +PA
Sbjct: 165 QDSVSSEPA 173
>gi|449483109|ref|XP_004156495.1| PREDICTED: uncharacterized protein LOC101226129 [Cucumis sativus]
Length = 536
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 48/141 (34%)
Query: 10 HGLELGAKKENFPTATAEKVKTGLVY-VVMAVG---------FKFRV------------- 46
+G + +EN PT+TAEKVK ++ V A+G F RV
Sbjct: 352 YGKQNKVPQENIPTSTAEKVKKNMLEGVEAALGLSKGSLPKPFYTRVQLWGAALPTNSPG 411
Query: 47 ------------CCLKWL-------------ALAEHIVAYLGSHGVCSEEFDVGLQTNIL 81
C WL AL HI Y S SEEF VGL
Sbjct: 412 IPCIFDPHGRAGICGDWLLGSNIESAALSGIALGNHIADYFRSGSEHSEEFAVGLHKEFQ 471
Query: 82 PLKGHDIGQFLGLESMEKVEA 102
P++GHDIGQF GL + ++ E+
Sbjct: 472 PIQGHDIGQFPGLGTEKQAES 492
>gi|449443231|ref|XP_004139383.1| PREDICTED: uncharacterized protein LOC101219713 [Cucumis sativus]
Length = 545
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 48/141 (34%)
Query: 10 HGLELGAKKENFPTATAEKVKTGLVY-VVMAVG---------FKFRV------------- 46
+G + +EN PT+TAEKVK ++ V A+G F RV
Sbjct: 352 YGKQNKVPQENIPTSTAEKVKKNMLEGVEAALGLSKGSLPKPFYTRVQLWGAALPTNSPG 411
Query: 47 ------------CCLKWL-------------ALAEHIVAYLGSHGVCSEEFDVGLQTNIL 81
C WL AL HI Y S SEEF VGL
Sbjct: 412 IPCIFDPHGRAGICGDWLLGSNIESAALSGIALGNHIADYFRSGSEHSEEFAVGLHKEFQ 471
Query: 82 PLKGHDIGQFLGLESMEKVEA 102
P++GHDIGQF GL + ++ E+
Sbjct: 472 PIQGHDIGQFPGLGTEKQAES 492
>gi|242086110|ref|XP_002443480.1| hypothetical protein SORBIDRAFT_08g020230 [Sorghum bicolor]
gi|241944173|gb|EES17318.1| hypothetical protein SORBIDRAFT_08g020230 [Sorghum bicolor]
Length = 507
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 36/64 (56%)
Query: 41 GFKFRVCCLKWLALAEHIVAYLGSHGVCSEEFDVGLQTNILPLKGHDIGQFLGLESMEKV 100
G L ++LA HI Y S+G EEF +GL ++ ++GHDIGQF GL+S
Sbjct: 438 GSSIEAAVLSGMSLANHIADYFVSNGDRPEEFAIGLHEDLNAVEGHDIGQFPGLDSQTPQ 497
Query: 101 EAQA 104
A+A
Sbjct: 498 VAEA 501
>gi|357116570|ref|XP_003560053.1| PREDICTED: uncharacterized protein LOC100824134 [Brachypodium
distachyon]
Length = 477
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 41 GFKFRVCCLKWLALAEHIVAYLGSHGVCSEEFDVGLQTNILPLKGHDIGQFLGLESMEKV 100
G L ++L +H+ Y S G EEF +GL ++ ++GHDIGQF GL+S +K
Sbjct: 407 GSSIEAAVLSGISLGDHVADYFASCGERPEEFAIGLDDSLNRVEGHDIGQFPGLDSSQKP 466
Query: 101 E-AQAYQPAT 109
+ A+A AT
Sbjct: 467 QVAEAQLTAT 476
>gi|326493132|dbj|BAJ85027.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 469
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 41 GFKFRVCCLKWLALAEHIVAYLGSHGVCSEEFDVGLQTNILPLKGHDIGQFLGLESMEKV 100
G L ++L +H+ Y S G EEF +GL ++ ++GHDIGQF GL+S +
Sbjct: 400 GSSIEAAVLSGMSLGDHVADYFASGGERPEEFAIGLDDSLNRVEGHDIGQFPGLDSQKPQ 459
Query: 101 EAQ 103
A+
Sbjct: 460 VAE 462
>gi|168008463|ref|XP_001756926.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691797|gb|EDQ78157.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 439
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%)
Query: 40 VGFKFRVCCLKWLALAEHIVAYLGSHGVCSEEFDVGLQTNILPLKGHDIGQFLGLESMEK 99
+G L +ALAEHI + + EEF +GLQ ++G DIGQF G +E
Sbjct: 369 LGSSLEAAALSGMALAEHIADFRDRGELNPEEFSIGLQKGFSNVEGQDIGQFPGSTGLET 428
Query: 100 VEAQ 103
+Q
Sbjct: 429 KMSQ 432
>gi|194699268|gb|ACF83718.1| unknown [Zea mays]
Length = 310
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 40 VGFKFRVCCLKWLALAEHIVAYLGSHGVCSEEFDVGLQTNILPLKGHDIGQFLGLESMEK 99
G L ++LA HI Y S EEF +G+ ++ ++GHDIGQF GL++
Sbjct: 240 TGSSIEAAVLSGMSLANHIADYFVSTQDRPEEFAIGVHDDLNAVEGHDIGQFPGLDTQTP 299
Query: 100 VEAQA 104
A+A
Sbjct: 300 QVAEA 304
>gi|226530158|ref|NP_001140386.1| uncharacterized protein LOC100272440 [Zea mays]
gi|223973745|gb|ACN31060.1| unknown [Zea mays]
Length = 505
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 41 GFKFRVCCLKWLALAEHIVAYLGSHGVCSEEFDVGLQTNILPLKGHDIGQFLGLESMEKV 100
G L ++LA HI Y S EEF +G+ ++ ++GHDIGQF GL++
Sbjct: 436 GSSIEAAVLSGMSLANHIADYFVSTQDRPEEFAIGVHDDLNAVEGHDIGQFPGLDTQTPQ 495
Query: 101 EAQA 104
A+A
Sbjct: 496 VAEA 499
>gi|255580905|ref|XP_002531271.1| conserved hypothetical protein [Ricinus communis]
gi|223529104|gb|EEF31084.1| conserved hypothetical protein [Ricinus communis]
Length = 467
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 40 VGFKFRVCCLKWLALAEHIVAYLGSHGVCSEEFDVGLQTNILPLKG-HDIGQFLGLESME 98
+G L +ALA HI Y+ S G EEF +GL + L+G HDIGQF S
Sbjct: 401 LGSNLESAALSGMALANHIGDYIESGGAGGEEFGMGLHADFHTLEGHHDIGQF----SDF 456
Query: 99 KVEAQAYQPAT 109
+EA Y AT
Sbjct: 457 ILEAHPYHLAT 467
>gi|297203819|ref|ZP_06921216.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197711872|gb|EDY55906.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length = 232
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 4 HPRKRHHGL---ELGAKKENFPTATAEKVKTGLVYVVMAVGFKFRVCCLKWLALAEHIVA 60
PR R + +L AK + FP A EKV+T L+ +A+ K + +AEH V
Sbjct: 23 RPRPRRGAMSETDLHAKFQQFPDAVREKVETALLDAKIALKVKAAEVLVDKGEMAEHAVT 82
Query: 61 YLGSHGVCSEEFDVGLQTNILPLK 84
G G S E V T ILPLK
Sbjct: 83 TAGRIGAKSGE--VSELTTILPLK 104
>gi|363814350|ref|NP_001242814.1| uncharacterized protein LOC100797419 [Glycine max]
gi|255638193|gb|ACU19410.1| unknown [Glycine max]
Length = 117
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 24/50 (48%)
Query: 40 VGFKFRVCCLKWLALAEHIVAYLGSHGVCSEEFDVGLQTNILPLKGHDIG 89
+G L +ALA HI Y S G EF VGL PL+GH IG
Sbjct: 68 LGSNIEAAVLSGIALANHIADYSQSPGTDPGEFAVGLNHEFQPLEGHGIG 117
>gi|302804250|ref|XP_002983877.1| hypothetical protein SELMODRAFT_119146 [Selaginella moellendorffii]
gi|300148229|gb|EFJ14889.1| hypothetical protein SELMODRAFT_119146 [Selaginella moellendorffii]
Length = 434
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 52 LALAEHIVAYLGSHGVCSEEFDVGLQTNILPLKGHDIGQFLG 93
+ALA H+ Y+ E+F +GL + L+ HDIG+F G
Sbjct: 373 MALAHHVNGYVEDSRASLEKFSIGLDMPLSALESHDIGEFPG 414
>gi|302754734|ref|XP_002960791.1| hypothetical protein SELMODRAFT_73844 [Selaginella moellendorffii]
gi|300171730|gb|EFJ38330.1| hypothetical protein SELMODRAFT_73844 [Selaginella moellendorffii]
Length = 434
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 52 LALAEHIVAYLGSHGVCSEEFDVGLQTNILPLKGHDIGQFLG 93
+ALA H+ Y+ E+F +GL + L+ HDIG+F G
Sbjct: 373 MALAHHVNGYVEDSRASLEKFSIGLDMPLSGLESHDIGEFPG 414
>gi|359425945|ref|ZP_09217035.1| putative branched-chain amino acid ABC transporter permease
protein [Gordonia amarae NBRC 15530]
gi|358238804|dbj|GAB06617.1| putative branched-chain amino acid ABC transporter permease
protein [Gordonia amarae NBRC 15530]
Length = 347
Score = 34.3 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 11 GLELGAKKENFPTATAEKVKTGLVYVVMAVGFKFRVCCLKWLALAEHIVAYLGSHG 66
G +LGA K+ F T T + + G +Y ++AVG+ L+ + A V LG G
Sbjct: 18 GFDLGALKDGFWTLTIQGLAYGSIYALVAVGYTLVYGVLRLINFAHSEVFMLGMFG 73
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,704,498,967
Number of Sequences: 23463169
Number of extensions: 58893688
Number of successful extensions: 98800
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 98757
Number of HSP's gapped (non-prelim): 44
length of query: 109
length of database: 8,064,228,071
effective HSP length: 77
effective length of query: 32
effective length of database: 6,257,564,058
effective search space: 200242049856
effective search space used: 200242049856
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)