BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>037228
MCISELANSKASVDNEDEYNIRVVKTLYDALNSFDVKTVHRLLTSDLEWWFHGPPGHQHL
MHMLTGSSSSSEDKRCFTFVPLSTVAFGPTVIVEGHSKEHSVSWVHAWTVTDGIITQVRE
YFNTSVTVTRFGDPQLLSSPVAPVTVSSSCQSVWQSKLCDNNSVPGLVLAL

High Scoring Gene Products

Symbol, full name Information P value
SAG20
AT3G10985 		protein from Arabidopsis thaliana 5.5e-22
AT5G01740 protein from Arabidopsis thaliana 4.4e-20

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  037228
        (171 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:1006230220 - symbol:SAG20 "AT3G10985" species:...   256  5.5e-22   1
TAIR|locus:2181072 - symbol:AT5G01740 "AT5G01740" species...   238  4.4e-20   1


>TAIR|locus:1006230220 [details] [associations]
            symbol:SAG20 "AT3G10985" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0007568 "aging" evidence=IEP]
            [GO:0009620 "response to fungus" evidence=IEP] EMBL:CP002686
            GO:GO:0006950 GO:GO:0007568 GO:GO:0009620 EMBL:AY045972
            EMBL:AY091355 EMBL:AY088170 EMBL:BT000768 IPI:IPI00655426
            RefSeq:NP_974279.1 UniGene:At.20787 UniGene:At.71454
            ProteinModelPortal:Q94AK6 SMR:Q94AK6 IntAct:Q94AK6 STRING:Q94AK6
            EnsemblPlants:AT3G10985.1 GeneID:2745879 KEGG:ath:AT3G10985
            TAIR:At3g10985 eggNOG:NOG298554 HOGENOM:HOG000029924
            InParanoid:Q94AK6 OMA:REYSNTS PhylomeDB:Q94AK6
            ProtClustDB:CLSN2681308 Genevestigator:Q94AK6 InterPro:IPR009798
            InterPro:IPR016533 Pfam:PF07107 PIRSF:PIRSF007948 Uniprot:Q94AK6
        Length = 110

 Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
 Identities = 57/113 (50%), Positives = 68/113 (60%)

Query:    61 MHMLTGSSSSSEDKRCFTFVPLSTVAFGPTVIVEGHSKEHSVSWVHAWTVTDGIITQVRE 120
             M +LTG  S S     F FVPLS V+FG TVI EG     S+SW+HAWTV +GIITQVRE
Sbjct:     1 MRVLTGGVSPSSSS--FEFVPLSVVSFGSTVIAEGCDAATSISWIHAWTVANGIITQVRE 58

Query:   121 YFNTSVTVTRFGDPQLLXXXXXXXXXXXXCQSVWQSKLCDN--NSVPGLVLAL 171
             Y NTS+TVTR G+  +             C SVW+S+        VPGLVLA+
Sbjct:    59 YSNTSLTVTRIGNV-VAGRRSAEIAPPSHCSSVWESQFSGRAGKPVPGLVLAI 110


>TAIR|locus:2181072 [details] [associations]
            symbol:AT5G01740 "AT5G01740" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AL162351
            HOGENOM:HOG000029924 InterPro:IPR009798 Pfam:PF07107 EMBL:AY075604
            EMBL:BT014870 IPI:IPI00541380 PIR:T48195 RefSeq:NP_195794.1
            UniGene:At.33512 ProteinModelPortal:Q9LZX2 DNASU:831686
            EnsemblPlants:AT5G01740.1 GeneID:831686 KEGG:ath:AT5G01740
            TAIR:At5g01740 eggNOG:NOG315363 InParanoid:Q9LZX2 OMA:CVIAEGW
            PhylomeDB:Q9LZX2 ProtClustDB:CLSN2687137 Genevestigator:Q9LZX2
            Uniprot:Q9LZX2
        Length = 162

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 59/157 (37%), Positives = 79/157 (50%)

Query:    20 NIRVVKTLYDALNSFDVKTVHRLLTSDLEWWFHGPPGHQHLMHMLTGSSSSSEDKRCFTF 79
             N   ++ LY AL   D  TV +++ SD+EWWFHGP   QH+M +LTG          F F
Sbjct:    18 NQGTIELLYKALQQGDTSTVTKVVASDVEWWFHGPHDCQHMMRLLTGEPPRQVS---FRF 74

Query:    80 VPLSTVAFGP---TVIVEGHSKEHSVSWVHAWTVTDGIITQVREYFNTSVTVTRFGDPQL 136
              P S     P    VI EG      V WVH W + DG++T++REYFNT +TVT +     
Sbjct:    75 EPSSVQVVVPGHDCVIAEGWEGSR-VYWVHVWKLKDGVVTELREYFNTWLTVTDYS---- 129

Query:   137 LXXXXXXXXXXXXCQSVWQSKLCD--NNSVPGLVLAL 171
                          C +VW+S   D    S+P L+LA+
Sbjct:   130 ---LGAVGWDMGRC-TVWESVPRDLARGSLPSLLLAI 162


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.132   0.416    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      171       159   0.00091  106 3  11 22  0.50    31
                                                     30  0.43    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  179 KB (2103 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.70u 0.12s 15.82t   Elapsed:  00:00:01
  Total cpu time:  15.70u 0.12s 15.82t   Elapsed:  00:00:01
  Start:  Sat May 11 04:49:08 2013   End:  Sat May 11 04:49:09 2013

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