BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037230
(815 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SWB4|PARP3_SOYBN Poly [ADP-ribose] polymerase 3 OS=Glycine max GN=PARP3 PE=2 SV=1
Length = 815
Score = 1301 bits (3366), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/807 (75%), Positives = 695/807 (86%), Gaps = 3/807 (0%)
Query: 1 MKVHETRSHAHASSDEEKVMTRKQKAENKTQEATETPPKKTKQENNGNGGHANGKRSGDV 60
MKV ETRSH HA +EEKVMTRKQKAE+K E E PKK K E GH NGK V
Sbjct: 1 MKVQETRSHVHALGEEEKVMTRKQKAESKAHE-VEHSPKKAKVEKED--GHINGKSETGV 57
Query: 61 TAEFEEFCKSIEGQLSAEQMREILELNGQDSSGSDVAVVTKCLDMLFYGPLDKCPVCNGN 120
E++EFCK+ L EQMR+ILE NG DSSGSD+ + +C D+LFYG LDKC VCNG+
Sbjct: 58 AEEYDEFCKATTEHLPLEQMRDILEANGLDSSGSDLEITRRCQDLLFYGALDKCSVCNGS 117
Query: 121 LEFDGKRYSCKGMYSEWSTCTFRTKDPPRKQEPTKLPDSVLNSPISDLAKRYQDPSHRPR 180
LEFDG+RY C+G YSEW++CTF T++PPRKQEP KLPDSV NS SDL K+YQDPSHRP
Sbjct: 118 LEFDGRRYVCRGFYSEWASCTFSTRNPPRKQEPIKLPDSVQNSLASDLLKKYQDPSHRPH 177
Query: 181 RDVGAAVKPFTGMTISLMGRLSRTHQYWRTTIEKHGGKVAASPIGLTCLVASPAERERGG 240
RD+G A KPFTGM ISLMGRL+RTH YW+TTIEKHGGKVA S IG TCLVASPAERERGG
Sbjct: 178 RDLGLAEKPFTGMMISLMGRLTRTHHYWKTTIEKHGGKVANSIIGSTCLVASPAERERGG 237
Query: 241 SSKLVEAMERGTRVVSEAWLIDSIEKQEAQPLEAYDLVTDLAPDSKGIPWDKMDPSEEAI 300
+SKL EAMER VV EAWLIDSIEKQE QPLEAYDLV+DL+ D KGIPWDK DP EEAI
Sbjct: 238 TSKLAEAMERSIPVVREAWLIDSIEKQEPQPLEAYDLVSDLSVDGKGIPWDKQDPGEEAI 297
Query: 301 ESIAAELKLYGKRGVYKDTKLQEQGGKILEKDGILYNCAFSLCDQGRGMNLYCIVQLITV 360
ES++AELKLYGKRGVYKDTKLQEQGGKI E+DGILYNCAFS+CDQGRG+N YC++QLI V
Sbjct: 298 ESLSAELKLYGKRGVYKDTKLQEQGGKIFERDGILYNCAFSVCDQGRGLNDYCVMQLIVV 357
Query: 361 PDSNLHLYYKKGKVGDDPNAEERLEEWTGVDNAIKEFVRLFEEVTGNEFEPWEREKKFQK 420
P++ LHLY+KKG+VGDDPNAEERLEEW VD A+KEFVRLFEE+TGNEFEPWEREKKFQK
Sbjct: 358 PENRLHLYFKKGRVGDDPNAEERLEEWDNVDGALKEFVRLFEEITGNEFEPWEREKKFQK 417
Query: 421 KPLKFYPIDMDDGVEVRHGGLGMRQLGVAAAHSKLDPVVANFMKVLCSQEVYRYALMEMG 480
KPLKFYPIDMDDG+EVRHG LG+RQLG+AA H KL+P+VANFMKVLCSQE+Y+YALMEMG
Sbjct: 418 KPLKFYPIDMDDGIEVRHGALGLRQLGIAATHCKLEPLVANFMKVLCSQEIYKYALMEMG 477
Query: 481 LDAPDLPIGMLSNVHLNRCEEVLQQFIEAVKSTKETGQKAEAIWTDFSNRWFTLMHSLRP 540
D PDLPIGM++N+HL +CE+VL +FI+ VKS KETG KAEA+WTDFS RWFTLMHS RP
Sbjct: 478 YDCPDLPIGMVTNLHLKKCEDVLLEFIDKVKSLKETGPKAEAVWTDFSQRWFTLMHSTRP 537
Query: 541 FIFRDNQEIADHAASSFEAVRDITVASHLIGDMSGSTLDDPLSDCYEKLACSISALEKDS 600
F FRD QEIADHAA++ E VRDIT ASHLIGDM+GST+DDPLS+ Y+KL CSISAL+K S
Sbjct: 538 FNFRDYQEIADHAAAALEGVRDITQASHLIGDMTGSTIDDPLSETYKKLGCSISALDKSS 597
Query: 601 DDYKMIVNYLEKTYEPVKLGDIEYGVSVDNIFVIESNAQPSLDEIKKLPNKVLLWCGTRS 660
DDY+MIV YLEKTYEPVK+GDIEYGVSV+NIF +++ PS ++I KLPNKVLLWCG+RS
Sbjct: 598 DDYEMIVKYLEKTYEPVKVGDIEYGVSVENIFAVQTGGCPSYEDIIKLPNKVLLWCGSRS 657
Query: 661 SNLLRHLQKGFLPASCSLPVPGYMFGRAIVCSDAAAEAARYGFTAADRPEGFLVLAVASL 720
SNLLRHLQKGFLPA CSLP+PGYMFG+AIVCSDAAAEAARYGFTA DRPEGFLVLA+ASL
Sbjct: 658 SNLLRHLQKGFLPAICSLPIPGYMFGKAIVCSDAAAEAARYGFTAVDRPEGFLVLAIASL 717
Query: 721 GDQVTELKKPPEDTKSLEDKKLGVKGLGRKKTDESEHFFWNDDIKVPGGRLIPSEHKNSP 780
G+++TELK PPED SLE+KK+GVKG G+KKTDESEHF W DDIKVP G+L+ S+H++SP
Sbjct: 718 GNEITELKTPPEDASSLEEKKVGVKGPGKKKTDESEHFVWKDDIKVPCGKLVASDHQDSP 777
Query: 781 LEYNEYAVYDPKQTSIRFLVGVKFEER 807
LEYNEYAVYD K+ I +LVGVK+EE+
Sbjct: 778 LEYNEYAVYDKKRARISYLVGVKYEEK 804
>sp|Q1SGF1|PARP3_MEDTR Putative poly [ADP-ribose] polymerase 3 OS=Medicago truncatula
GN=PARP3 PE=3 SV=1
Length = 799
Score = 1260 bits (3260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/817 (73%), Positives = 693/817 (84%), Gaps = 20/817 (2%)
Query: 1 MKVHETRSH--AHASSDEEKVMTRKQKAENKTQEATETPPKKTKQENNGNGGHANGKRSG 58
MKV E+RSH HA +EEKVMTRKQKAE+K E E PKK K E+ NG H NGK +
Sbjct: 1 MKV-ESRSHNVHHAHGEEEKVMTRKQKAESKAHE-VEHSPKKAKVEDEKNG-HTNGKSAS 57
Query: 59 DVTAEFEEFCKSIEGQLSAEQMREILELNGQDSSGSDVAVVTKCLDMLFYGPLDKCPVCN 118
DV E++EFCK+ QLS EQM+EILE N DSSGSD+ + +C D+LF+G L+KC VCN
Sbjct: 58 DVVQEYDEFCKATNEQLSLEQMKEILEANDLDSSGSDLEITRRCQDLLFFGALEKCMVCN 117
Query: 119 GNLEFDGKRYSCKGMYSEWSTCTFRTKDPPRKQEPTKLPDSVLNSPISDLAKRYQDPSHR 178
GN+EFDG+RY C+G YSEWS+CTF T++PPRK EP KLPDSV NSP+SDL K+YQDPS R
Sbjct: 118 GNMEFDGRRYGCRGFYSEWSSCTFSTREPPRKDEPIKLPDSVQNSPVSDLLKKYQDPSKR 177
Query: 179 PRRDVGAAVKPFTGMTISLMGRLSRTHQYWRTTIEKHGGKVAASPIGLTCLVASPAERER 238
P+RD+G A+KPFTGM ISLMGRL+RTH + G +CLVASPAER+R
Sbjct: 178 PQRDLGLAIKPFTGMMISLMGRLNRTHLNFS---------------GASCLVASPAERDR 222
Query: 239 GGSSKLVEAMERGTRVVSEAWLIDSIEKQEAQPLEAYDLVTDLAPDSKGIPWDKMDPSEE 298
GG+SKL +AMERG VV EAWL DSIEKQE QPLE+YDLV+DL+ D KGIPWDK DP EE
Sbjct: 223 GGTSKLADAMERGIPVVREAWLTDSIEKQEPQPLESYDLVSDLSVDGKGIPWDKQDPGEE 282
Query: 299 AIESIAAELKLYGKRGVYKDTKLQEQGGKILEKDGILYNCAFSLCDQGRGMNLYCIVQLI 358
AIES++AELKLYGKRGVYKDTKL EQ GKI EKDGILYNCAFSLCDQGR +N YC++QLI
Sbjct: 283 AIESLSAELKLYGKRGVYKDTKLHEQDGKIFEKDGILYNCAFSLCDQGRKLNDYCVMQLI 342
Query: 359 TVPDSNLHLYYKKGKVGDDPNAEERLEEWTGVDNAIKEFVRLFEEVTGNEFEPWEREKKF 418
VP+++LHLY+KKG+VGDDP+AEERLEE VDNAIKEFVRLFEE+TGNEFE WEREKKF
Sbjct: 343 VVPENSLHLYFKKGRVGDDPSAEERLEECENVDNAIKEFVRLFEEITGNEFESWEREKKF 402
Query: 419 QKKPLKFYPIDMDDGVEVRHGGLGMRQLGVAAAHSKLDPVVANFMKVLCSQEVYRYALME 478
QKKPLKFYPIDMDDGVEVRHG LG+RQLG+AA H KL+P+VANFMKVLCSQE+Y+YALME
Sbjct: 403 QKKPLKFYPIDMDDGVEVRHGALGLRQLGIAATHCKLEPMVANFMKVLCSQEIYKYALME 462
Query: 479 MGLDAPDLPIGMLSNVHLNRCEEVLQQFIEAVKSTKETGQKAEAIWTDFSNRWFTLMHSL 538
MG D+PDLPIGM++N+HL RCEE+L +FIE VK+ KETG KA+AIW+DFS +WFTLMHS
Sbjct: 463 MGYDSPDLPIGMVTNLHLKRCEEILLEFIEKVKTLKETGPKADAIWSDFSQKWFTLMHST 522
Query: 539 RPFIFRDNQEIADHAASSFEAVRDITVASHLIGDMSGSTLDDPLSDCYEKLACSISALEK 598
RPFIFRD QEIADHAA++ E VRDIT+ASHLIGDMSGST+DDPLSD Y+KL CSI+ LEK
Sbjct: 523 RPFIFRDYQEIADHAAAALEGVRDITLASHLIGDMSGSTIDDPLSDTYKKLGCSITPLEK 582
Query: 599 DSDDYKMIVNYLEKTYEPVKLGDIEYGVSVDNIFVIESNAQPSLDEIKKLPNKVLLWCGT 658
+S+DY+MIV YLEKTYEPVK+GDIEYGVSV+NIF +ES+A PS +I K+PNKVLLWCG+
Sbjct: 583 NSNDYEMIVKYLEKTYEPVKVGDIEYGVSVENIFTVESSACPSYADIVKMPNKVLLWCGS 642
Query: 659 RSSNLLRHLQKGFLPASCSLPVPGYMFGRAIVCSDAAAEAARYGFTAADRPEGFLVLAVA 718
RSSNLLRHL KGFLPA CSLPVPGYMFG+AIVCSDAAAEAARYGFTA DRPEGFLVLA+A
Sbjct: 643 RSSNLLRHLHKGFLPAICSLPVPGYMFGKAIVCSDAAAEAARYGFTAVDRPEGFLVLAIA 702
Query: 719 SLGDQVTELKKPPEDTKSLEDKKLGVKGLGRKKTDESEHFFWNDDIKVPGGRLIPSEHKN 778
SLG+++TELK PPEDT SLE+KK+GVKGLG+KKTDESEHF W DDIKVP G +I SEH++
Sbjct: 703 SLGNEITELKSPPEDTTSLEEKKVGVKGLGKKKTDESEHFVWKDDIKVPCGSIIASEHED 762
Query: 779 SPLEYNEYAVYDPKQTSIRFLVGVKFEERGVEMEPAE 815
SPLEYNEYAVYDPKQ I +LVGVK+EE+ ++ AE
Sbjct: 763 SPLEYNEYAVYDPKQVRISYLVGVKYEEKDAVIDTAE 799
>sp|Q9FK91|PARP3_ARATH Poly [ADP-ribose] polymerase 3 OS=Arabidopsis thaliana GN=PARP3
PE=2 SV=2
Length = 814
Score = 1216 bits (3147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/812 (71%), Positives = 683/812 (84%), Gaps = 5/812 (0%)
Query: 1 MKVHETRSHAHASSDEEKVMTRKQKAENKTQEATETPPKKTKQENNGNGGHANGKRSGDV 60
MKVHETRSHAH S DE+K RK KAE K E +E KK K EN+ +G NG +GD
Sbjct: 1 MKVHETRSHAHMSGDEQKGNLRKHKAEGKLPE-SEQSQKKAKPEND-DGRSVNG--AGDA 56
Query: 61 TAEFEEFCKSIEGQLSAEQMREILELNGQDSSGSDVAVVTKCLDMLFYGPLDKCPVCNGN 120
+E+ EFCK++E LS +Q++E+LE+NGQD S + ++ +C D+LFYG L KCP+C G
Sbjct: 57 ASEYNEFCKAVEENLSIDQIKEVLEINGQDCSAPEETLLAQCQDLLFYGALAKCPLCGGT 116
Query: 121 LEFDG-KRYSCKGMYSEWSTCTFRTKDPPRKQEPTKLPDSVLNSPISDLAKRYQDPSHRP 179
L D KR+ C G SEW +C F TKDPPRK+EP K+PDSV+NS ISDL K++QDP RP
Sbjct: 117 LICDNEKRFVCGGEISEWCSCVFSTKDPPRKEEPVKIPDSVMNSAISDLIKKHQDPKSRP 176
Query: 180 RRDVGAAVKPFTGMTISLMGRLSRTHQYWRTTIEKHGGKVAASPIGLTCLVASPAERERG 239
+R++G+A KPF GM ISLMGRL+RTHQYW+ IE++GGKV+ + G+TCLV SPAERERG
Sbjct: 177 KRELGSADKPFVGMMISLMGRLTRTHQYWKKKIERNGGKVSNTVQGVTCLVVSPAERERG 236
Query: 240 GSSKLVEAMERGTRVVSEAWLIDSIEKQEAQPLEAYDLVTDLAPDSKGIPWDKMDPSEEA 299
G+SK+VEAME+G VVSEAWLIDS+EK EAQPLEAYD+V+DL+ + KGIPWDK DPSEEA
Sbjct: 237 GTSKMVEAMEQGLPVVSEAWLIDSVEKHEAQPLEAYDVVSDLSVEGKGIPWDKQDPSEEA 296
Query: 300 IESIAAELKLYGKRGVYKDTKLQEQGGKILEKDGILYNCAFSLCDQGRGMNLYCIVQLIT 359
IES +AELK+YGKRGVY DTKLQE+GGKI EKDG+LYNCAFS+CD G+G N YCI+QL+T
Sbjct: 297 IESFSAELKMYGKRGVYMDTKLQERGGKIFEKDGLLYNCAFSICDLGKGRNEYCIMQLVT 356
Query: 360 VPDSNLHLYYKKGKVGDDPNAEERLEEWTGVDNAIKEFVRLFEEVTGNEFEPWEREKKFQ 419
VPDSNL++Y+K+GKVGDDPNAEERLEEW + AIKEF RLFEE+ GNEFEPWEREKK Q
Sbjct: 357 VPDSNLNMYFKRGKVGDDPNAEERLEEWEDEEAAIKEFARLFEEIAGNEFEPWEREKKIQ 416
Query: 420 KKPLKFYPIDMDDGVEVRHGGLGMRQLGVAAAHSKLDPVVANFMKVLCSQEVYRYALMEM 479
KKP KF+PIDMDDG+EVR G LG+RQLG+A+AH KLD VANF+KVLC QE+Y YALME+
Sbjct: 417 KKPHKFFPIDMDDGIEVRSGALGLRQLGIASAHCKLDSFVANFIKVLCGQEIYNYALMEL 476
Query: 480 GLDAPDLPIGMLSNVHLNRCEEVLQQFIEAVKSTKETGQKAEAIWTDFSNRWFTLMHSLR 539
GLD PDLP+GML+++HL RCEEVL +F+E VK+TKETGQKAEA+W DFS+RWF+LMHS R
Sbjct: 477 GLDPPDLPMGMLTDIHLKRCEEVLLEFVEKVKTTKETGQKAEAMWADFSSRWFSLMHSTR 536
Query: 540 PFIFRDNQEIADHAASSFEAVRDITVASHLIGDMSGSTLDDPLSDCYEKLACSISALEKD 599
P D E+ADHAAS+FE VRDI AS LIGDM G TLDDPLSD Y+KL C IS ++K+
Sbjct: 537 PMRLHDVNELADHAASAFETVRDINTASRLIGDMRGDTLDDPLSDRYKKLGCKISVVDKE 596
Query: 600 SDDYKMIVNYLEKTYEPVKLGDIEYGVSVDNIFVIESNAQPSLDEIKKLPNKVLLWCGTR 659
S+DYKM+V YLE TYEPVK+ D+EYGVSV N+F +ES+A PSLD+IKKLPNKVLLWCG+R
Sbjct: 597 SEDYKMVVKYLETTYEPVKVSDVEYGVSVQNVFAVESDAIPSLDDIKKLPNKVLLWCGSR 656
Query: 660 SSNLLRHLQKGFLPASCSLPVPGYMFGRAIVCSDAAAEAARYGFTAADRPEGFLVLAVAS 719
SSNLLRH+ KGFLPA CSLPVPGYMFGRAIVCSDAAAEAARYGFTA DRPEGFLVLAVAS
Sbjct: 657 SSNLLRHIYKGFLPAVCSLPVPGYMFGRAIVCSDAAAEAARYGFTAVDRPEGFLVLAVAS 716
Query: 720 LGDQVTELKKPPEDTKSLEDKKLGVKGLGRKKTDESEHFFWNDDIKVPGGRLIPSEHKNS 779
LG++VTE PPEDTK+LEDKK+GVKGLGRKKT+ESEHF W DDIKVP GRL+PSEHK+S
Sbjct: 717 LGEEVTEFTSPPEDTKTLEDKKIGVKGLGRKKTEESEHFMWRDDIKVPCGRLVPSEHKDS 776
Query: 780 PLEYNEYAVYDPKQTSIRFLVGVKFEERGVEM 811
PLEYNEYAVYDPKQTSIRFLV VK+EE+G E+
Sbjct: 777 PLEYNEYAVYDPKQTSIRFLVEVKYEEKGTEI 808
>sp|Q0E0Q3|PARP3_ORYSJ Poly [ADP-ribose] polymerase 3 OS=Oryza sativa subsp. japonica
GN=PARP3 PE=2 SV=1
Length = 831
Score = 993 bits (2568), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/832 (59%), Positives = 628/832 (75%), Gaps = 21/832 (2%)
Query: 3 VHETRSHAHASSDEE-KVMTRKQKAENKTQEATETPPKKTK-----QENNGNGGHANGKR 56
VHETRS A+S EE K +KQK E+K QE + P K K +E++G + K+
Sbjct: 2 VHETRSRTLAASQEEGKAAPKKQKTESKEQEGGQQAPSKNKKTADNEEHDGEQEPSKNKK 61
Query: 57 --------SGDVTA--EFEEFCKSIEGQLSAEQMREILELNGQDSSGSDVAVVTKCLDML 106
+G TA EF EFCK+I L+ E MR+IL+ N QD+SGS+ AVV +C D++
Sbjct: 62 LKAEESDLNGKATAVKEFSEFCKAIREHLTIEDMRKILQGNEQDASGSEDAVVPRCEDVM 121
Query: 107 FYGPLDKCPVCNGNLEFDGKRYSCKGMYSEWSTCTFRTKDPPRKQEPTKLPDSVLNSPIS 166
FYGPLDKCPVC G LE G +Y+C G +SEW+ C+F T +P R+ P K+PD V N +
Sbjct: 122 FYGPLDKCPVCGGQLECKGLKYNCTGTHSEWACCSFSTNNPSRRGGPIKVPDDVKNDFVR 181
Query: 167 DLAKRYQDPSHRPRRDVGAAVKPFTGMTISLMGRLSRTHQYWRTTIEKHGGKVAASPIGL 226
K+ Q+ + P+R++ F+GM I+L GR+SR+H Y++ I KHGGKV S IG+
Sbjct: 182 KWLKQ-QEGNKYPKRNLDDE-GIFSGMMIALSGRMSRSHGYFKEQIMKHGGKVNNSVIGV 239
Query: 227 TCLVASPAERERGGSSKLVEAMERGTRVVSEAWLIDSIEKQEAQPLEAYDLVTDLAPDSK 286
TC+VASPAER +GGS EA+ERGT VVSE W+IDS++K+E QPL AYD+ +D+ P+ +
Sbjct: 240 TCVVASPAERHQGGSGGFAEALERGTPVVSENWIIDSVQKKEKQPLAAYDIASDVVPEGR 299
Query: 287 GIPWDKMDPSEEAIESIAAELKLYGKRGVYKDTKLQEQGGKILEKDGILYNCAFSLCDQG 346
G+P +DP+EEAIE++AAELKL GKR V+KD+KL++ GG I EKDGI+YNCAFS+CD G
Sbjct: 300 GLPLGNLDPTEEAIETLAAELKLAGKRAVHKDSKLEKDGGHIYEKDGIIYNCAFSVCDLG 359
Query: 347 RGMNLYCIVQLITVPDSNLHLYYKKGKVGDDPNAEERLEEW-TGVDNAIKEFVRLFEEVT 405
+N CI+QLI VP+++LHLYYKKG +G D AEER+E++ + ++AIKEFVRLFEEVT
Sbjct: 360 GDINQLCIMQLIMVPENHLHLYYKKGPIGHDQMAEERVEDFGSRFNDAIKEFVRLFEEVT 419
Query: 406 GNEFEPWEREKKFQKKPLKFYPIDMDDGVEVRHGGLGMRQLGVAAAHSKLDPVVANFMKV 465
GNEFEPWEREKKF+KK +K YP+DMDDGV+VRHGG+ +RQLG AAAH KLDP V MK
Sbjct: 420 GNEFEPWEREKKFKKKCMKMYPLDMDDGVDVRHGGVALRQLGAAAAHCKLDPSVTFIMKQ 479
Query: 466 LCSQEVYRYALMEMGLDAPDLPIGMLSNVHLNRCEEVLQQFIEAVKSTKETGQKAEAIWT 525
LCSQE+YRYAL EMG D PDLPIGML+++HL R EE L ++ + V+S E+G A+A W
Sbjct: 480 LCSQEIYRYALTEMGHDVPDLPIGMLTDLHLKRGEETLLEWKQDVESAPESGPAADAFWM 539
Query: 526 DFSNRWFTLMHSLRPFIFRDNQEIADHAASSFEAVRDITVASHLIGDMSGSTLDDPLSDC 585
+ SN+WFTL + RP+ + ++IAD+ AS E VRDI VAS LIGD+ GSTLDDPLS C
Sbjct: 540 EISNKWFTLFPTTRPYTMKGYEQIADNVASGLETVRDINVASRLIGDVFGSTLDDPLSQC 599
Query: 586 YEKLACSISALEKDSDDYKMIVNYLEKTYEPVKLGDIEYGVSVDNIFVIESNAQPSLDEI 645
Y+KL CSI+ + +DS+DYKMI+ YLEKTYEPVK+GD+ Y +V+ I+ +ES+A PS DEI
Sbjct: 600 YKKLGCSINRVVEDSEDYKMILKYLEKTYEPVKVGDVVYSATVERIYAVESSALPSYDEI 659
Query: 646 KKLPNKVLLWCGTRSSNLLRHLQKGFLPASCSLPVPGYMFGRAIVCSDAAAEAARYGFTA 705
KKLPNKVLLWCGTRSSNLLRHL+ GF+PA C +PVPGYMFG+AIVCSDAAAEAA YGFTA
Sbjct: 660 KKLPNKVLLWCGTRSSNLLRHLRDGFVPAVCHIPVPGYMFGKAIVCSDAAAEAALYGFTA 719
Query: 706 ADRPEGFLVLAVASLGDQVTELKKPP--EDTKSLEDKKLGVKGLGRKKTDESEHFFWNDD 763
DRPEG+LVLAVASLG ++ E+ P ED K +E+KK+GVKG+GRK TD SEHF W D
Sbjct: 720 VDRPEGYLVLAVASLGKEIQEITGTPGSEDVKRMEEKKMGVKGVGRKTTDPSEHFTWRDG 779
Query: 764 IKVPGGRLIPSEHKNSPLEYNEYAVYDPKQTSIRFLVGVKFEERGVEMEPAE 815
+ VP G+L+PS +K+ PLEYNEYAVYDPKQ SI FLVGVK+EE+ +E+ P E
Sbjct: 780 VTVPCGKLVPSTNKDGPLEYNEYAVYDPKQVSIAFLVGVKYEEQNMEVVPDE 831
>sp|Q9ZP54|PARP1_ARATH Poly [ADP-ribose] polymerase 1 OS=Arabidopsis thaliana GN=PARP1
PE=1 SV=2
Length = 983
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 248/775 (32%), Positives = 392/775 (50%), Gaps = 73/775 (9%)
Query: 61 TAEFEEFCKSIEGQLSAEQMREILELNGQDSSGSDVAVVTKCLDMLFYGPLDKCPVCNGN 120
T E + ++ +++ ++RE+LE+N Q + GS++ + KC D + +GPL CP+C+G+
Sbjct: 253 TKELWDLKDDLKKYVTSAELREMLEVNEQSTRGSELDLRDKCADGMMFGPLALCPMCSGH 312
Query: 121 LEFDGKRYSCKGMYSEWSTCTFRTKDPPRKQEPTKLPDSVLN--------SPISDLAKRY 172
L F G Y C G SEWS C+ T DP R + K+PD N S S KR
Sbjct: 313 LSFSGGLYRCHGYISEWSKCSHSTLDPDRIKGKWKIPDETENQFLLKWNKSQKSVKPKRI 372
Query: 173 QDPSHRPRRDVGAAVKPFT---------GMTISLMGRLSRTHQYWRTTIEKHGGKVAAS- 222
P G K T + +S+ G ++ Q W+ IE+ G + A+
Sbjct: 373 LRPVLSGETSQGQGSKDATDSSRSERLADLKVSIAGN-TKERQPWKKRIEEAGAEFHANV 431
Query: 223 PIGLTCLVASPAERERGGSSKLVEAMERGTRVVSEAWLIDSIEKQEAQPLEAYDLVTDLA 282
G +CLV R + M+ +V E +L+D +KQ P + Y +
Sbjct: 432 KKGTSCLVVCGLTDIRDAEMRKARRMK--VAIVREDYLVDCFKKQRKLPFDKYKI----- 484
Query: 283 PDSKGIPWDKMDPSEEAIESIAAELKLYGKRGVYKDTKLQEQGGKILEKDGILYNCAFSL 342
E+ ES+ +K+ G+ V++ + LQE ILE +YN S+
Sbjct: 485 --------------EDTSESLVT-VKVKGRSAVHEASGLQEH-CHILEDGNSIYNTTLSM 528
Query: 343 CDQGRGMNLYCIVQLITV-PDSNLHLYYKKGKVGDDPNAEERLEEWTGVDNAIKEFVRLF 401
D G+N Y I+Q+I S+ +++ K G+VG++ ++EE + D A+ EF RLF
Sbjct: 529 SDLSTGINSYYILQIIQEDKGSDCYVFRKWGRVGNEKIGGNKVEEMSKSD-AVHEFKRLF 587
Query: 402 EEVTGNEFEPWEREKKFQKKPLKFYPIDMDDGVEVRHGGLGMRQLGVAAAHSKLDPVVAN 461
E TGN +E WE++ FQK+P KF P+D+D GV + Q S L P +
Sbjct: 588 LEKTGNTWESWEQKTNFQKQPGKFLPLDIDYGVNKQVAKKEPFQ-----TSSNLAPSLIE 642
Query: 462 FMKVLCSQEVYRYALMEMGLDAPDLPIGMLSNVHLNRCEEVLQQFIEAVKSTKETGQKAE 521
MK+L E YR A+ME ++ ++P+G LS ++ + E L + + + E
Sbjct: 643 LMKMLFDVETYRSAMMEFEINMSEMPLGKLSKHNIQKGFEALTEIQRLLTESDPQPTMKE 702
Query: 522 AIWTDFSNRWFTLMHSLRPFIFRDNQEIADHAASSFEAVRDITVASHLIGDMSGSTLDDP 581
++ D SNR+FT++ S+ P I RD + EA++DI +AS ++G ST +
Sbjct: 703 SLLVDASNRFFTMIPSIHPHIIRDEDDFKS-KVKMLEALQDIEIASRIVGFDVDST--ES 759
Query: 582 LSDCYEKLACSISALEKDSDDYKMIVNYLEKTYEPVKLGDIEYGVSVDNIFVIESNAQPS 641
L D Y+KL C IS L DS+DY++I YL T+ P E+ + ++ +F +E +
Sbjct: 760 LDDKYKKLHCDISPLPHDSEDYRLIEKYLNTTHAPT---HTEWSLELEEVFALEREGE-- 814
Query: 642 LDEI----KKLPNKVLLWCGTRSSNLLRHLQKGFLPASCSLPVPGYMFGRAIVCSDAAAE 697
D+ +KL NK+LLW G+R +N + L +G A P GYMFG+ I +D ++
Sbjct: 815 FDKYAPHREKLGNKMLLWHGSRLTNFVGILNQGLRIAPPEAPATGYMFGKGIYFADLVSK 874
Query: 698 AARYGFTAADRPEGFLVLAVASLGD--QVTELK---KPPEDTKSLEDKKLGVKGLGRKKT 752
+A+Y +T P G ++L+ +LG+ ++T+ K KPP S KGLG+K
Sbjct: 875 SAQYCYTCKKNPVGLMLLSEVALGEIHELTKAKYMDKPPRGKHS-------TKGLGKKVP 927
Query: 753 DESEHFFWNDDIKVPGGRLIPSEHKNSPLEYNEYAVYDPKQTSIRFLVGVKFEER 807
+SE W D+ VP G+ + S+ K S L YNEY VYD Q ++FL+ V+F+ +
Sbjct: 928 QDSEFAKWRGDVTVPCGKPVSSKVKASELMYNEYIVYDTAQVKLQFLLKVRFKHK 982
>sp|Q7EYV7|PARP1_ORYSJ Poly [ADP-ribose] polymerase 1 OS=Oryza sativa subsp. japonica
GN=PARP1 PE=2 SV=1
Length = 977
Score = 356 bits (914), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 231/763 (30%), Positives = 397/763 (52%), Gaps = 65/763 (8%)
Query: 71 IEGQLSAEQMREILELNGQDSSGSDVAVVTKCLDMLFYGPLDKCPVCNGNLEFDGKRYSC 130
++ +S ++R +LE NGQD+SG + ++ +C D + +G L CPVC+ L + G +Y C
Sbjct: 253 LKKHVSTAELRNMLEANGQDTSGPERHLLDRCADGMLFGALGTCPVCSSFLYYHGGQYHC 312
Query: 131 KGMYSEWSTCTFRTKDPPRKQEPTKLPDSVLNSPISDLAKRYQD-------PSHRPRRDV 183
G SEWS CT+ T +P R ++ K+PD + N ++ K + P P + +
Sbjct: 313 SGYVSEWSKCTYSTTEPVRSKKKWKIPDEMDNGYLTKWFKSQKAKKPERVLPPMSPEKSL 372
Query: 184 GAAVKP--------FTGMTISLMGRLSRTHQYWRTTIEKHGGKVAASPI-GLTCLV-ASP 233
+ + + +S++G+ W+ ++ G A+ +CLV S
Sbjct: 373 CQSTQQNRSFLSEGLDKLRVSIVGQSKDVVDGWKQKLKDAGANFNATVTKDSSCLVLCSE 432
Query: 234 AERERGGSSKLVEAMERGTRVVSEAWLIDSIEKQEAQPLEAYDLVTDLAPDSKGIPWDKM 293
E E ++++ +A ++ E +L + I K P + Y K+
Sbjct: 433 LESE---NAEVKKARRLKIPILREGYLGECIRKNRVLPFDLY----------------KV 473
Query: 294 DPSEEAIESIAAELKLYGKRGVYKDTKLQEQGGKILEKDGILYNCAFSLCDQGRGMNLYC 353
+ + E+ + +K+ G+ V++ + LQ+ G ILE +YN ++ D RG+N Y
Sbjct: 474 EAALESSKGGTMTVKVKGRSAVHESSGLQDT-GHILEDGKSIYNTTLNMSDLTRGVNSYY 532
Query: 354 IVQLITVPD-SNLHLYYKKGKVGDDPNAEERLEEWTGVDNAIKEFVRLFEEVTGNEFEPW 412
I+Q+I + S+ +++ K G+VG++ +LEE + + +AI+EF RLF E TGN +E W
Sbjct: 533 ILQVIEEDNGSDCYVFRKWGRVGNEKIGGTKLEEMSKI-HAIQEFRRLFLEKTGNPWEAW 591
Query: 413 EREKKFQKKPLKFYPIDMDDGVEVRHGGLGMRQLGVAAAHSKLDPVVANFMKVLCSQEVY 472
E++ FQK+P KFYP+D+D GV G ++ + S L P + M +L + E Y
Sbjct: 592 EQKTNFQKQPGKFYPLDIDYGVRQ-----GPKRKDIDKMKSSLPPQLLELMNMLFNIETY 646
Query: 473 RYALMEMGLDAPDLPIGMLSNVHLNRCEEVLQQFIEAVKSTKETGQKA-EAIWTDFSNRW 531
R A++E ++ ++P+G LS ++ + E L + + +T E++ SNR+
Sbjct: 647 RAAMLEFKINMSEMPLGKLSKENIQKGFEALTEIQNLLGNTNNQELAVRESLIVAASNRF 706
Query: 532 FTLMHSLRPFIFRDNQEIADHAASSFEAVRDITVASHLIGDMSGSTLDDPLSDCYEKLAC 591
FTL+ S+ P I +D ++ EA++DI +AS L+G S + D+ L D Y+KL C
Sbjct: 707 FTLIPSIHPHIIQDEDDLM-VKVKMLEALQDIEIASKLVGFDSDN--DESLDDKYKKLRC 763
Query: 592 SISALEKDSDDYKMIVNYLEKTYEPVKLGDIEYGVSVDNIFVIESNAQPSLDEIKK--LP 649
+I+ L D +DYK++ YL T+ P E+ + ++ +F ++ + + S K L
Sbjct: 764 AITPLPHDCEDYKLVEKYLLNTHAPTHK---EWSLELEEVFSLDRDGEFSKYSRYKNNLH 820
Query: 650 NKVLLWCGTRSSNLLRHLQKGFLPASCSLPVPGYMFGRAIVCSDAAAEAARYGFTAADRP 709
NK+LLW G+R +N + L +G A PV GYMFG+ + +D +++A+Y + P
Sbjct: 821 NKMLLWHGSRLTNYVGILSQGLRIAPPEAPVTGYMFGKGLYFADLVSKSAQYCYVDRKNP 880
Query: 710 EGFLVLAVASLGD-----QVTELKKPPEDTKSLEDKKLGVKGLGRKKTDESEHFFWNDDI 764
G ++L+ +LGD + T + KPP S KGLG+ ESE W DD+
Sbjct: 881 VGLMLLSEVALGDMYELKKATSMDKPPRGKHS-------TKGLGKTVPLESEFAKWRDDV 933
Query: 765 KVPGGRLIPSEHKNSPLEYNEYAVYDPKQTSIRFLVGVKFEER 807
VP G+ +P+ K S L YNEY VY+ Q +++L+ V+F +
Sbjct: 934 VVPCGKPVPASIKTSELMYNEYIVYNTSQVKMQYLLKVRFHHK 976
>sp|Q9ZSV1|PARP1_MAIZE Poly [ADP-ribose] polymerase 1 OS=Zea mays GN=PARP1 PE=2 SV=1
Length = 980
Score = 340 bits (871), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 224/764 (29%), Positives = 390/764 (51%), Gaps = 67/764 (8%)
Query: 71 IEGQLSAEQMREILELNGQDSSGSDVAVVTKCLDMLFYGPLDKCPVCNGNLEFDGKRYSC 130
++ +SA ++R++LE NGQD+SG + ++ +C D + +G L CPVC + + +Y C
Sbjct: 256 LKTHVSAAELRDMLEANGQDTSGPERHLLDRCADGMLFGALGPCPVCANGMYYYNGQYQC 315
Query: 131 KGMYSEWSTCTFRTKDPPRKQEPTKLPDSVLNSPISDLAK--RYQDP------------- 175
G SEWS CT+ +P R ++ ++P N + K + + P
Sbjct: 316 SGNVSEWSKCTYSATEPVRVKKKWQIPHGTKNDYLMKWFKSQKVKKPERVLPPMSPEKSG 375
Query: 176 SHRPRRDVGAAVKPFTGMTISLMGRLSRTHQYWRTTIEKHGGKVAASPI-GLTCLVASPA 234
S +R + K + S++G+ W ++ G A + + CL+A
Sbjct: 376 SKATQRTSLLSSKGLDKLRFSVVGQSKEAANEWIEKLKLAGANFYARVVKDIDCLIACGE 435
Query: 235 ERERGGSSKLVEAMERGTRVVSEAWLIDSIEKQEAQPLEAYDLVTDLAPDSKGIPWDKMD 294
++++ +A +V E ++ + ++K + P + Y K++
Sbjct: 436 LDNE--NAEVRKARRLKIPIVREGYIGECVKKNKMLPFDLY----------------KLE 477
Query: 295 PSEEAIESIAAELKLYGKRGVYKDTKLQEQGGKILEKDGILYNCAFSLCDQGRGMNLYCI 354
+ E+ + +K+ G+ V++ + LQ+ ILE +YN ++ D G+N Y +
Sbjct: 478 NALESSKGSTVTVKVKGRSAVHESSGLQDT-AHILEDGKSIYNATLNMSDLALGVNSYYV 536
Query: 355 VQLITVPD-SNLHLYYKKGKVGDDPNAEERLEEWTGVDNAIKEFVRLFEEVTGNEFEPWE 413
+Q+I D S +++ K G+VG + ++LEE + + AIKEF RLF E TGN +E WE
Sbjct: 537 LQIIEQDDGSECYVFRKWGRVGSEKIGGQKLEEMSKTE-AIKEFKRLFLEKTGNSWEAWE 595
Query: 414 REKKFQKKPLKFYPIDMDDGVEVRHGGLGMRQLGVAAAHSKLDPVVANFMKVLCSQEVYR 473
+ F+K+P +FYP+D+D GV+ ++ ++ S L P + MK+L + E YR
Sbjct: 596 CKTNFRKQPGRFYPLDVDYGVKK-----APKRKDISEMKSSLAPQLLELMKMLFNVETYR 650
Query: 474 YALMEMGLDAPDLPIGMLSNVHLNRCEEVLQQFIEAVKSTKETGQKA-EAIWTDFSNRWF 532
A+ME ++ ++P+G LS ++ + E L + +K T + E++ SNR+F
Sbjct: 651 AAMMEFEINMSEMPLGKLSKENIEKGFEALTEIQNLLKDTADQALAVRESLIVAASNRFF 710
Query: 533 TLMHSLRPFIFRDNQEIADHAASSFEAVRDITVASHLIGDMSGSTLDDPLSDCYEKLACS 592
TL+ S+ P I RD ++ A EA++DI +AS ++G S S Y KL C
Sbjct: 711 TLIPSIHPHIIRDEDDLMIK-AKMLEALQDIEIASKIVGFDSDSDESLDDK--YMKLHCD 767
Query: 593 ISALEKDSDDYKMIVNYLEKTYEPVKLGDIEYGVSVDNIFVIESNAQPSLDEIKK----L 648
I+ L DS+DYK+I YL T+ P ++ + ++ +F ++ + + L++ + L
Sbjct: 768 ITPLAHDSEDYKLIEQYLLNTHAPT---HKDWSLELEEVFSLDRDGE--LNKYSRYKNNL 822
Query: 649 PNKVLLWCGTRSSNLLRHLQKGFLPASCSLPVPGYMFGRAIVCSDAAAEAARYGFTAADR 708
NK+LLW G+R +N + L +G A PV GYMFG+ + +D +++A+Y + +
Sbjct: 823 HNKMLLWHGSRLTNFVGILSQGLRIAPPEAPVTGYMFGKGLYFADLVSKSAQYCYVDRNN 882
Query: 709 PEGFLVLAVASLGD-----QVTELKKPPEDTKSLEDKKLGVKGLGRKKTDESEHFFWNDD 763
P G ++L+ +LGD + T + KPP S KGLG+ ESE W DD
Sbjct: 883 PVGLMLLSEVALGDMYELKKATSMDKPPRGKHS-------TKGLGKTVPLESEFVKWRDD 935
Query: 764 IKVPGGRLIPSEHKNSPLEYNEYAVYDPKQTSIRFLVGVKFEER 807
+ VP G+ +PS ++S L YNEY VY+ Q ++FL+ V+F +
Sbjct: 936 VVVPCGKPVPSSIRSSELMYNEYIVYNTSQVKMQFLLKVRFHHK 979
>sp|P09874|PARP1_HUMAN Poly [ADP-ribose] polymerase 1 OS=Homo sapiens GN=PARP1 PE=1 SV=4
Length = 1014
Score = 264 bits (674), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 220/775 (28%), Positives = 356/775 (45%), Gaps = 70/775 (9%)
Query: 76 SAEQMREILELNGQDSSGSDVAVVTKCLDMLFYGPLDKCPVCNGNLEFDGKRYSCKGMYS 135
S ++E+L N Q + A++ + D + +G L C C+G L F Y C G +
Sbjct: 257 STNDLKELLIFNKQQVPSGESAILDRVADGMVFGALLPCEECSGQLVFKSDAYYCTGDVT 316
Query: 136 EWSTCTFRTKDPPRKQEPTKLPDSVLN-SPISDLAKRYQDPSHRPRRDVGAAV------- 187
W+ C +T+ P RK+ T P S + L + QD P A
Sbjct: 317 AWTKCMVKTQTPNRKEWVT--PKEFREISYLKKLKVKKQDRIFPPETSASVAATPPPSTA 374
Query: 188 -------------KPFTGMTISLMGRLSRTHQYWRTTIEKHGGKVAASPIGLTCLVASPA 234
KP + M I +G+LSR + IEK GGK+ + + +++
Sbjct: 375 SAPAAVNSSASADKPLSNMKILTLGKLSRNKDEVKAMIEKLGGKLTGTANKASLCISTKK 434
Query: 235 ERERGGSSKLVEAMERGTRVVSEAWLID-SIEKQEAQPLEAYDLVTDLAPDSKGIPWDKM 293
E E+ + K+ E E RVVSE +L D S + Q L +++ + K P + +
Sbjct: 435 EVEKM-NKKMEEVKEANIRVVSEDFLQDVSASTKSLQELFLAHILSPWGAEVKAEPVEVV 493
Query: 294 DP----------------SEEAIESIAAELKLYGKRG--VYKDTKLQEQGGKILEKDGIL 335
P EE I +KL K G V D+ L E +LEK G +
Sbjct: 494 APRGKSGAALSKKSKGQVKEEGINKSEKRMKLTLKGGAAVDPDSGL-EHSAHVLEKGGKV 552
Query: 336 YNCAFSLCDQGRGMNLYCIVQLITVPDSNLHLYYKK-GKVGDDPNAEERLEEWTGVDNAI 394
++ L D +G N Y +QL+ N + ++ G+VG + +LE+ ++AI
Sbjct: 553 FSATLGLVDIVKGTNSYYKLQLLEDDKENRYWIFRSWGRVGTVIGSN-KLEQMPSKEDAI 611
Query: 395 KEFVRLFEEVTGNEFEPWEREKKFQKKPLKFYPIDMDDGVEVRHGGLGMRQLGV-AAAHS 453
+ F++L+EE TGN + K F K P KFYP+++D G + +++L V S
Sbjct: 612 EHFMKLYEEKTGNAW----HSKNFTKYPKKFYPLEIDYGQDEE----AVKKLTVNPGTKS 663
Query: 454 KLDPVVANFMKVLCSQEVYRYALMEMGLDAPDLPIGMLSNVHLNRCEEVLQQFIEAVKST 513
KL V + +K++ E + A++E +D +P+G LS + +L + +AV
Sbjct: 664 KLPKPVQDLIKMIFDVESMKKAMVEYEIDLQKMPLGKLSKRQIQAAYSILSEVQQAVSQG 723
Query: 514 KETGQKAEAIWTDFSNRWFTLM---HSLRPFIFRDNQEIADHAASSFEAVRDITVASHLI 570
Q D SNR++TL+ ++ +N + + + DI VA L+
Sbjct: 724 SSDSQ-----ILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAKVEMLDNLLDIEVAYSLL 778
Query: 571 GDMSGSTLDDPLSDCYEKLACSISALEKDSDDYKMIVNYLEKTYEPVKLGDIEYGVSVDN 630
S + DP+ YEKL I +++DS++ ++I Y++ T+ Y + V +
Sbjct: 779 RGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEIIRKYVKNTHATTHNA---YDLEVID 835
Query: 631 IFVIESNAQ-PSLDEIKKLPNKVLLWCGTRSSNLLRHLQKGFLPASCSLPVPGYMFGRAI 689
IF IE + K+L N+ LLW G+R++N L +G A PV GYMFG+ I
Sbjct: 836 IFKIEREGECQRYKPFKQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGI 895
Query: 690 VCSDAAAEAARYGFTAADRPEGFLVLAVASLGDQVTELKKPPEDTKSLEDKKLGVKGLGR 749
+D +++A Y T+ P G ++L +LG+ + ELK +K L K VKGLG+
Sbjct: 896 YFADMVSKSANYCHTSQGDPIGLILLGEVALGN-MYELKHASHISK-LPKGKHSVKGLGK 953
Query: 750 KKTDESEHFFWNDDIKVPGGRLIPSEHKNSPLEYNEYAVYDPKQTSIRFLVGVKF 804
D S + D + VP G I S ++ L YNEY VYD Q ++++L+ +KF
Sbjct: 954 TTPDPSANISL-DGVDVPLGTGISSGVNDTSLLYNEYIVYDIAQVNLKYLLKLKF 1007
>sp|Q9R152|PARP1_CRIGR Poly [ADP-ribose] polymerase 1 OS=Cricetulus griseus GN=PARP1 PE=2
SV=3
Length = 1013
Score = 261 bits (667), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 219/773 (28%), Positives = 357/773 (46%), Gaps = 67/773 (8%)
Query: 76 SAEQMREILELNGQDSSGSDVAVVTKCLDMLFYGPLDKCPVCNGNLEFDGKRYSCKGMYS 135
S ++E+L N Q + A++ + D + +G L C C+G L F Y C G +
Sbjct: 257 STSDLKELLIFNQQQVPSGESAILDRVADGMAFGALLPCKECSGQLVFKSDAYYCTGDVT 316
Query: 136 EWSTCTFRTKDPPRKQEPTKLPDSVLN-SPISDLAKRYQD-----------PSHRPRRDV 183
W+ C +T+ P RK+ T P S + L + QD P H P
Sbjct: 317 AWTKCMVKTQTPSRKEWVT--PKEFREISYLKKLKVKKQDRIFPPETSAPAPPHLPPSVT 374
Query: 184 GA---------AVKPFTGMTISLMGRLSRTHQYWRTTIEKHGGKVAASPIGLTCLVASPA 234
A A KP + M I +G+LS++ + TIEK GGK+ S + +++
Sbjct: 375 SAPTAVNSSCPADKPLSNMKILTLGKLSQSKDEAKATIEKLGGKLTGSANNASLCISTKK 434
Query: 235 ERERGGSSKLVEAMERGTRVVSEAWLID-SIEKQEAQPLEAYDLVTDLAPDSKGIPWDKM 293
E E+ G K+ E RVV E +L D + + Q L + ++ + K P +
Sbjct: 435 EVEKMGK-KMEEVQAANVRVVCEDFLQDVAASTKSLQELLSAHSLSSWGAEVKVEPVEVA 493
Query: 294 DPSEEAIESIAAELKLYGKRGVYKD---TKLQEQGG-------------KILEKDGILYN 337
P ++ LY + GV K KL +GG +LEK G +++
Sbjct: 494 APKGKSAAPSKKSKGLYKEEGVNKSEKRMKLTLKGGAAVDPDSGLEHSAHVLEKGGKVFS 553
Query: 338 CAFSLCDQGRGMNLYCIVQLITV-PDSNLHLYYKKGKVGDDPNAEERLEEWTGVDNAIKE 396
L D +G N Y +QL+ +S ++ G+VG + +LE+ ++A++
Sbjct: 554 ATLGLVDIVKGTNSYYKLQLLEDDKESRYWIFRSWGRVGTVIGSN-KLEQMPSKEDAVEH 612
Query: 397 FVRLFEEVTGNEFEPWEREKKFQKKPLKFYPIDMDDGVEVRHGGLGMRQLGVA-AAHSKL 455
F++L+EE TGN + K F K P KFYP+++D G + +++L V SKL
Sbjct: 613 FMKLYEEKTGNAW----HSKNFTKYPKKFYPLEIDYGQDEE----AVKKLTVKPGTKSKL 664
Query: 456 DPVVANFMKVLCSQEVYRYALMEMGLDAPDLPIGMLSNVHLNRCEEVLQQFIEAVKSTKE 515
V + ++ E + AL+E +D +P+G LS + +L + +AV
Sbjct: 665 PKAVQELVGMIFDVESMKKALVEYEIDLQKMPLGKLSKRQIQAAYSILSEVQQAVSQGSS 724
Query: 516 TGQKAEAIWTDFSNRWFTLM---HSLRPFIFRDNQEIADHAASSFEAVRDITVASHLIGD 572
Q D SNR++TL+ ++ +N + + + DI VA L+
Sbjct: 725 DSQ-----ILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAKVEMLDNLLDIEVAYSLLRG 779
Query: 573 MSGSTLDDPLSDCYEKLACSISALEKDSDDYKMIVNYLEKTYEPVKLGDIEYGVSVDNIF 632
S + DP+ YEKL I +++DS++ ++I Y++ T+ Y + V +IF
Sbjct: 780 GSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEVIRKYVKNTHATTHNA---YDLEVMDIF 836
Query: 633 VIESNAQPS-LDEIKKLPNKVLLWCGTRSSNLLRHLQKGFLPASCSLPVPGYMFGRAIVC 691
IE + K+L N+ LLW G+R++N L +G A PV GYMFG+ I
Sbjct: 837 KIEREGESQRYKPFKQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYF 896
Query: 692 SDAAAEAARYGFTAADRPEGFLVLAVASLGDQVTELKKPPEDTKSLEDKKLGVKGLGRKK 751
+D +++A Y T+ P G ++L +LG+ + ELK +K L K VKGLG+
Sbjct: 897 ADMVSKSANYCHTSQGDPIGLILLGEVALGN-MYELKHASHISK-LPKGKHSVKGLGKTT 954
Query: 752 TDESEHFFWNDDIKVPGGRLIPSEHKNSPLEYNEYAVYDPKQTSIRFLVGVKF 804
D S + ++VP G IPS ++ L YNEY VYD Q ++++L+ +KF
Sbjct: 955 PDPSASITL-EGVEVPLGTGIPSGVNDTCLLYNEYIVYDIAQVNLKYLLKLKF 1006
>sp|P18493|PARP1_BOVIN Poly [ADP-ribose] polymerase 1 OS=Bos taurus GN=PARP1 PE=2 SV=2
Length = 1016
Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 221/774 (28%), Positives = 360/774 (46%), Gaps = 69/774 (8%)
Query: 76 SAEQMREILELNGQDSSGSDVAVVTKCLDMLFYGPLDKCPVCNGNLEFDGKRYSCKGMYS 135
S ++E+L N Q+ + A++ + D + +G L C C+G L F G Y C G +
Sbjct: 260 STNDLKELLIFNKQEVPSGESAILDRVADGMVFGALLPCEECSGQLVFKGDAYYCTGDVT 319
Query: 136 EWSTCTFRTKDPPRKQEPTKLPDSVLN-SPISDLAKRYQDPSHRPRRDV----------- 183
W+ C +T+ P RK+ T P S L + QD P
Sbjct: 320 AWTKCMVKTQTPNRKEWVT--PKEFREISYFKKLKIKKQDRIFPPESSTPVGAAAPPSAA 377
Query: 184 --------GAAVKPFTGMTISLMGRLSRTHQYWRTTIEKHGGKVAASPIGLTCLVASPAE 235
G KP + M I +G+LS+ + TIEK GGK+ + + +++ E
Sbjct: 378 SAPAAVHSGPPDKPLSNMKILTLGKLSQNKDEVKATIEKLGGKLTGTANKASLCISTKKE 437
Query: 236 RERGGSSKLVEAMERGTRVVSEAWLID-SIEKQEAQPLEAYDLVTDLAPDSKGIPWDKMD 294
++ + K+ E E RVVSE +L D S + Q L + L++ + K P + +
Sbjct: 438 VDKL-NKKMEEVKEANIRVVSEDFLQDISASTKSLQELLSTHLLSPWGAEVKVEPVEAVG 496
Query: 295 PS----------------EEAIESIAAELKLYGKRG--VYKDTKLQEQGGKILEKDGILY 336
P EE +KL K G V D+ L E +LEK G ++
Sbjct: 497 PKGKSGAAPSKKSKGPVKEEGTNKSEKRMKLTLKGGAAVDPDSGL-EHNAHVLEKGGKVF 555
Query: 337 NCAFSLCDQGRGMNLYCIVQLITV-PDSNLHLYYKKGKVGDDPNAEERLEEWTGVDNAIK 395
+ L D +G N Y +QL+ +S ++ G+VG + +LE+ ++AI+
Sbjct: 556 SATLGLVDIVKGTNSYYKLQLLEDDKESRYWIFRSWGRVGTVIGSN-KLEQMPSKEDAIE 614
Query: 396 EFVRLFEEVTGNEFEPWEREKKFQKKPLKFYPIDMDDGVEVRHGGLGMRQLGV-AAAHSK 454
F++L+EE TGN + K F K P KFYP+++D G + +++L V SK
Sbjct: 615 HFMKLYEEKTGNAW----HSKNFTKHPKKFYPLEIDYGQDEE----AVKKLTVNPGTKSK 666
Query: 455 LDPVVANFMKVLCSQEVYRYALMEMGLDAPDLPIGMLSNVHLNRCEEVLQQFIEAVKSTK 514
L V N +K++ E + A++E +D +P+G LS + +L + +A+
Sbjct: 667 LPKPVQNLIKMIFDVESMKKAMVEYEIDLQKMPLGKLSKRQIQAAYSILSEVQQAL---- 722
Query: 515 ETGQKAEAIWTDFSNRWFTLM---HSLRPFIFRDNQEIADHAASSFEAVRDITVASHLIG 571
+ +++ D SNR++TL+ ++ +N + + DI VA L+
Sbjct: 723 -SQGSSDSHILDLSNRFYTLIPHDFGMKKPPLLNNANSVQAKVEMLDNLLDIEVAYSLLR 781
Query: 572 DMSGSTLDDPLSDCYEKLACSISALEKDSDDYKMIVNYLEKTYEPVKLGDIEYGVSVDNI 631
S + DP+ YEKL I ++KDS++ ++I Y++ T+ Y + V +I
Sbjct: 782 GGSDDSSKDPIDVNYEKLKTDIKVVDKDSEEAEIIRKYVKNTHATTHNA---YDLEVVDI 838
Query: 632 FVIESNAQPS-LDEIKKLPNKVLLWCGTRSSNLLRHLQKGFLPASCSLPVPGYMFGRAIV 690
F IE + K+L N+ LLW G+R++N L +G A PV GYMFG+ I
Sbjct: 839 FKIEREGESQRYKPFKQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIY 898
Query: 691 CSDAAAEAARYGFTAADRPEGFLVLAVASLGDQVTELKKPPEDTKSLEDKKLGVKGLGRK 750
+D +++A Y T+ P G ++L A+LG+ + ELK +K L K VKGLG+
Sbjct: 899 FADMVSKSANYCHTSQGDPIGLILLGEAALGN-MYELKHARHISK-LPKGKHSVKGLGKT 956
Query: 751 KTDESEHFFWNDDIKVPGGRLIPSEHKNSPLEYNEYAVYDPKQTSIRFLVGVKF 804
D S D ++VP G I S ++ L YNEY VYD Q +++L+ +KF
Sbjct: 957 TPDPSASIT-VDGVEVPLGTGISSGVNDTCLLYNEYIVYDIAQVHLKYLLKLKF 1009
>sp|P27008|PARP1_RAT Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus GN=Parp1 PE=1
SV=4
Length = 1014
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 216/774 (27%), Positives = 358/774 (46%), Gaps = 69/774 (8%)
Query: 76 SAEQMREILELNGQDSSGSDVAVVTKCLDMLFYGPLDKCPVCNGNLEFDGKRYSCKGMYS 135
S ++E+L N Q + A++ + D + +G L C C+G L F Y C G +
Sbjct: 258 STNDLKELLIFNQQQVPSGESAILDRVADGMAFGALLPCKECSGQLVFKSDAYYCTGDVT 317
Query: 136 EWSTCTFRTKDPPRKQEPTKLPDSVLN-SPISDLAKRYQD-------------------- 174
W+ C +T++P RK+ T P S + L + QD
Sbjct: 318 AWTKCMVKTQNPSRKEWVT--PKEFREISYLKKLKIKKQDRLFPPESSAPAPPAPPVSIT 375
Query: 175 PSHRPRRDVGAAVKPFTGMTISLMGRLSRTHQYWRTTIEKHGGKVAASPIGLTCLVASPA 234
+ A KP + M I +G+LS+ + IEK GGK+ S + +++
Sbjct: 376 SAPTAVNSSAPADKPLSNMKILTLGKLSQNKDEAKAMIEKLGGKLTGSANKASLCISTKK 435
Query: 235 ERERGGSSKLVEAMERGTRVVSEAWLIDSI-------EKQEAQPLEAYDLVTDLAPDSKG 287
E E+ S K+ E RVV E +L D E A L ++ + P
Sbjct: 436 EVEKM-SKKMEEVKAANVRVVCEDFLQDVSASAKSLQELLSAHSLSSWGAEVKVEPGEVV 494
Query: 288 IPWDK-MDPSEEAIESIAAE----------LKLYGKRGVYKDTKLQEQGGKILEKDGILY 336
+P K PS+++ ++ E L L G V D+ L E +LEK G ++
Sbjct: 495 VPKGKSAAPSKKSKGAVKEEGVNKSEKRMKLTLKGGAAVDPDSGL-EHSAHVLEKGGKVF 553
Query: 337 NCAFSLCDQGRGMNLYCIVQLI-TVPDSNLHLYYKKGKVGDDPNAEERLEEWTGVDNAIK 395
+ L D +G N Y +QL+ + +S ++ G+VG + +LE+ ++A++
Sbjct: 554 SATLGLVDIVKGTNSYYKLQLLESDKESRYWIFRSWGRVGTVIGSN-KLEQMPSKEDAVE 612
Query: 396 EFVRLFEEVTGNEFEPWEREKKFQKKPLKFYPIDMDDGVEVRHGGLGMRQLGVA-AAHSK 454
F++L+EE TGN + K F K P KFYP+++D G + +++L V SK
Sbjct: 613 HFMKLYEEKTGNAW----HSKNFTKYPKKFYPLEIDYGQDEE----AVKKLAVKPGTKSK 664
Query: 455 LDPVVANFMKVLCSQEVYRYALMEMGLDAPDLPIGMLSNVHLNRCEEVLQQFIEAVKSTK 514
L V + ++ E + AL+E +D +P+G LS + +L + +AV
Sbjct: 665 LPKPVQELVGMIFDVESMKKALVEYEIDLQKMPLGKLSRRQIQAAYSILSEVQQAV---- 720
Query: 515 ETGQKAEAIWTDFSNRWFTLM---HSLRPFIFRDNQEIADHAASSFEAVRDITVASHLIG 571
+ +E+ D SNR++TL+ ++ +N + + + DI VA L+
Sbjct: 721 -SQGSSESQILDLSNRFYTLIPHDFGMKKPPLLNNTDSVQAKVEMLDNLLDIEVAYSLLR 779
Query: 572 DMSGSTLDDPLSDCYEKLACSISALEKDSDDYKMIVNYLEKTYEPVKLGDIEYGVSVDNI 631
S + DP+ YEKL I +++DS++ ++I Y++ T+ Y + V +I
Sbjct: 780 GGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEVIRKYVKNTHATTHNA---YDLEVIDI 836
Query: 632 FVIESNAQPS-LDEIKKLPNKVLLWCGTRSSNLLRHLQKGFLPASCSLPVPGYMFGRAIV 690
F IE + ++L N+ LLW G+R++N L +G A PV GYMFG+ I
Sbjct: 837 FKIEREGESQRYKPFRQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIY 896
Query: 691 CSDAAAEAARYGFTAADRPEGFLVLAVASLGDQVTELKKPPEDTKSLEDKKLGVKGLGRK 750
+D +++A Y T+ P G ++L +LG+ + ELK +K L K VKGLG+
Sbjct: 897 FADMVSKSANYCHTSQGDPIGLILLGEVALGN-MYELKHASHISK-LPKGKHSVKGLGKT 954
Query: 751 KTDESEHFFWNDDIKVPGGRLIPSEHKNSPLEYNEYAVYDPKQTSIRFLVGVKF 804
D S D ++VP G IPS ++ L YNEY VYD Q ++++L+ +KF
Sbjct: 955 APDPSASITL-DGVEVPLGTGIPSGVNDTCLLYNEYIVYDIAQVNLKYLLKLKF 1007
>sp|P31669|PARP1_XENLA Poly [ADP-ribose] polymerase 1 (Fragment) OS=Xenopus laevis
GN=parp1 PE=2 SV=1
Length = 998
Score = 253 bits (646), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 223/784 (28%), Positives = 355/784 (45%), Gaps = 77/784 (9%)
Query: 76 SAEQMREILELNGQDSSGSDVAVVTKCLDMLFYGPLDKCPVCNGNLEFDGKRYSCKGMYS 135
S ++E+L N Q + +V + D + +G L C C+G F G Y C G S
Sbjct: 243 STNDLKELLIANKQQVPSGETNIVDRVSDGMAFGALLPCEECSGQFVFKGDAYYCTGDLS 302
Query: 136 EWSTCTFRTKDPPRKQEPT--------------------KLPDSVLNSPISDLAKRYQDP 175
W+ C +T+ P RK T P +PIS A P
Sbjct: 303 AWTKCVAKTQTPNRKDWVTPKEFHEIPYLKKFKFKRHDRAFPPCAAPTPISPPAAPEPKP 362
Query: 176 SHRPRRDVGAAVKPFTGMTISLMGRLSRTHQYWRTTIEKHGGKVAASPIGLTCLVASPAE 235
+ G KP T + L+G+LS+ +T IE GGKVA S +++ E
Sbjct: 363 TVEETFPEG---KPLTNTKVLLIGKLSKNKDEVKTLIEGLGGKVAGSAHKANLCISTNKE 419
Query: 236 RERGGSSKLVEAMERGTRVVSEAWLIDSIEKQEAQPLEAYDLVTDLAPDSKG--IPWDKM 293
++ S K+ E RVVS+ +L + + Q +L++ S G I + +
Sbjct: 420 VKKM-SKKMEEVKAANVRVVSDDFLKEVESGKSVQ-----ELLSQFGISSWGAEIKQEAV 473
Query: 294 DPSEEAIESIAAELKLYGK----RGVYKD---TKLQEQGG-------------KILEKDG 333
P+E+ S K GK +G K KL +GG +LE G
Sbjct: 474 QPTEKQPSSGPVAGKSSGKVKEEKGSNKSEKKMKLTVKGGAAIDPDSELEDSCHVLETGG 533
Query: 334 ILYNCAFSLCDQGRGMNLYCIVQLITVP-DSNLHLYYKKGKVGDDPNAEERLEEWTGVDN 392
+++ L D RG N Y +QLI DS ++ G+VG ++ +LEE + ++
Sbjct: 534 KIFSATLGLVDITRGTNSYYKLQLIEHDRDSRYWVFRSWGRVGTVIGSK-KLEEMSSKED 592
Query: 393 AIKEFVRLFEEVTGNEFEPWEREKKFQKKPLKFYPIDMDDGVEVRHGGLGMRQLGVAAA- 451
AI+ F+ L+++ TGN + F K P KFYP+++D G E +++L V A
Sbjct: 593 AIEHFLNLYQDKTGNAW----HSPNFTKYPKKFYPLEIDYGQEEDV----VKKLSVGAGT 644
Query: 452 HSKLDPVVANFMKVLCSQEVYRYALMEMGLDAPDLPIGMLSNVHLNRCEEVLQQFIEAVK 511
SKL V +K++ E + A++E +D +P+G LS + +L Q +AV
Sbjct: 645 KSKLAKPVQELIKLIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSILSQVQQAVS 704
Query: 512 STKETGQKAEAIWTDFSNRWFTLM---HSLRPFIFRDNQEIADHAASSFEAVRDITVASH 568
+ +EA D SN+++TL+ ++ +N E + + DI VA
Sbjct: 705 ESL-----SEARLLDLSNQFYTLIPHDFGMKKPPLLNNLEYIQAKVQMLDNLLDIEVAYS 759
Query: 569 LIGDMSGSTLDDPLSDCYEKLACSISALEKDSDDYKMIVNYLEKTYEPVKLGDIEYGVSV 628
L+ + DP+ YEK+ I + KDS++ ++I +Y++ T+ Y + V
Sbjct: 760 LLRGGADDGEKDPIDVKYEKIKTDIKVVAKDSEESRIICDYVKNTHADTHNA---YDLEV 816
Query: 629 DNIFVIESNAQ-PSLDEIKKLPNKVLLWCGTRSSNLLRHLQKGFLPASCSLPVPGYMFGR 687
IF I+ + K+L N+ LLW G+R++N L +G A PV GYMFG+
Sbjct: 817 LEIFKIDREGEYQRYKPFKQLHNRQLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGK 876
Query: 688 AIVCSDAAAEAARYGFTAADRPEGFLVLAVASLGDQVTELKKPPEDTKSLEDKKLGVKGL 747
I +D +++A Y P G ++L +LG+ + ELK + TK L K VKGL
Sbjct: 877 GIYFADMVSKSANYCHAMPGSPIGLILLGEVALGN-MHELKAASQITK-LPKGKHSVKGL 934
Query: 748 GRKKTDESEHFFWNDDIKVPGGRLIPSEHKNSPLEYNEYAVYDPKQTSIRFLVGVKFEER 807
GR D S D + VP G+ + ++ L YNEY VYD Q ++++L+ +KF +
Sbjct: 935 GRTAPDPSATVQL-DGVDVPLGKGTSANISDTSLLYNEYIVYDIAQVNLKYLLKLKFNYK 993
Query: 808 GVEM 811
G M
Sbjct: 994 GGMM 997
>sp|P11103|PARP1_MOUSE Poly [ADP-ribose] polymerase 1 OS=Mus musculus GN=Parp1 PE=1 SV=3
Length = 1013
Score = 252 bits (643), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 214/774 (27%), Positives = 357/774 (46%), Gaps = 69/774 (8%)
Query: 76 SAEQMREILELNGQDSSGSDVAVVTKCLDMLFYGPLDKCPVCNGNLEFDGKRYSCKGMYS 135
S ++E+L N Q + A++ + D + +G L C C+G L F Y C G +
Sbjct: 257 STNDLKELLIFNQQQVPSGESAILDRVADGMAFGALLPCKECSGQLVFKSDAYYCTGDVT 316
Query: 136 EWSTCTFRTKDPPRKQEPTKLPDSVLN-SPISDLAKRYQDPSHRPRRDVGAAV------- 187
W+ C +T++P RK+ T P S + L + QD P V
Sbjct: 317 AWTKCMVKTQNPSRKEWVT--PKEFREISYLKKLKVKKQDRIFPPESSAPITVHWPLSVT 374
Query: 188 -------------KPFTGMTISLMGRLSRTHQYWRTTIEKHGGKVAASPIGLTCLVASPA 234
KP + M I +G+LS+ + IEK GGK+ S + ++
Sbjct: 375 SAPTAVNSSAPADKPLSNMKILTLGKLSQNKDEAKAVIEKLGGKLTGSANKASLCISIKK 434
Query: 235 ERERGGSSKLVEAMERGTRVVSEAWLID-SIEKQEAQPLEAYDLVTDLAPDSKGIPWDKM 293
E E+ + K+ E E RVVSE +L D S + Q L + ++ + K P + +
Sbjct: 435 EVEKM-NKKMEEVKEANIRVVSEDFLQDVSASTKSLQDLLSAHSLSPWGAEVKAEPGEVV 493
Query: 294 DP---------------SEEAIESIAAELKLYGKRG--VYKDTKLQEQGGKILEKDGILY 336
P EE + +KL K G V D+ L E +LEK G ++
Sbjct: 494 APRGKSAAPSKKSKGCFKEEGVNKSEKRMKLTLKGGAAVDPDSGL-EHSAHVLEKGGKVF 552
Query: 337 NCAFSLCDQGRGMNLYCIVQLITV-PDSNLHLYYKKGKVGDDPNAEERLEEWTGVDNAIK 395
+ L D +G N Y +QL+ +S ++ G++G + +LE+ + A++
Sbjct: 553 SATLGLVDIVKGTNSYYKLQLLEDDKESRYWIFRSWGRLGTVIGSN-KLEQMPSKEEAVE 611
Query: 396 EFVRLFEEVTGNEFEPWEREKKFQKKPLKFYPIDMDDGVEVRHGGLGMRQLGVA-AAHSK 454
+F++L+EE TGN + K F K P KFYP+++D G + +++L V SK
Sbjct: 612 QFMKLYEEKTGNAW----HSKNFTKYPKKFYPLEIDYGQDEE----AVKKLTVKPGTKSK 663
Query: 455 LDPVVANFMKVLCSQEVYRYALMEMGLDAPDLPIGMLSNVHLNRCEEVLQQFIEAVKSTK 514
L V + ++ + + AL+E +D +P+G LS + +L + + V
Sbjct: 664 LPKPVQELVGMIFDVDSMKKALVEYEIDLQKMPLGKLSRRQIQAAYSILSEVQQPV---- 719
Query: 515 ETGQKAEAIWTDFSNRWFTLM---HSLRPFIFRDNQEIADHAASSFEAVRDITVASHLIG 571
+ +E+ D SNR++TL+ ++ +N + + + DI VA L+
Sbjct: 720 -SQGSSESQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAKVEMLDNLLDIEVAYSLLR 778
Query: 572 DMSGSTLDDPLSDCYEKLACSISALEKDSDDYKMIVNYLEKTYEPVKLGDIEYGVSVDNI 631
S + DP+ YEKL I +++DS++ ++I Y++ T+ Y + V +I
Sbjct: 779 GGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEVIRKYVKNTHATTHNA---YDLEVIDI 835
Query: 632 FVIESNAQPS-LDEIKKLPNKVLLWCGTRSSNLLRHLQKGFLPASCSLPVPGYMFGRAIV 690
F IE + ++L N+ LLW G+R++N L +G A PV GYMFG+ I
Sbjct: 836 FKIEREGESQRYKPFRQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIY 895
Query: 691 CSDAAAEAARYGFTAADRPEGFLVLAVASLGDQVTELKKPPEDTKSLEDKKLGVKGLGRK 750
+D +++A Y T+ P G ++L +LG+ + ELK +K L K VKGLG+
Sbjct: 896 FADMVSKSANYCHTSQGDPIGLIMLGEVALGN-MYELKHASHISK-LPKGKHSVKGLGKT 953
Query: 751 KTDESEHFFWNDDIKVPGGRLIPSEHKNSPLEYNEYAVYDPKQTSIRFLVGVKF 804
D S + ++VP G IPS ++ L YNEY VYD Q ++++L+ +KF
Sbjct: 954 TPDPSASITL-EGVEVPLGTGIPSGVNDTALLYNEYIVYDIAQVNLKYLLKLKF 1006
>sp|P26446|PARP1_CHICK Poly [ADP-ribose] polymerase 1 OS=Gallus gallus GN=PARP1 PE=1 SV=2
Length = 1011
Score = 243 bits (619), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 217/784 (27%), Positives = 357/784 (45%), Gaps = 90/784 (11%)
Query: 76 SAEQMREILELNGQDSSGSDVAVVTKCLDMLFYGPLDKCPVCNGNLEFDGKRYSCKGMYS 135
S ++E+L N Q+ + A++ + D + +G L C C G F Y C G +
Sbjct: 256 STNDLKELLIANKQEVPSGENAILDRVADGMAFGALLPCEECKGQFVFKSDAYYCSGDIT 315
Query: 136 EWSTCTFRTKDPPRKQEPTKLPDSVLNSP-ISDLAKRYQDPSHRPRRDVGAAV------- 187
W+ C +T+ P RK +P P + + QD P A V
Sbjct: 316 AWTKCVAKTQTPNRKD--WVIPKEFREIPYLKKFKCKKQDRIFPPE---AATVNSAPPPP 370
Query: 188 --------------KPFTGMTISLMGRLSRTHQYWRTTIEKHGGKVAASPIGLTCLVASP 233
KP T M I +G+LS+ + + +E+ GGK+ + T +++
Sbjct: 371 ASAPLTETVTAPQDKPLTNMKILTLGKLSKNKEEVKNIVEELGGKMTTTANKATLCISTQ 430
Query: 234 AERERGGSSKLVEAMERGTRVVSEAWLIDSIEKQEA-QPLEAYDLVTDLAPDSKGIPWD- 291
E E+ S K+ E + RVVSE +L D + Q L + ++ PW
Sbjct: 431 KEVEK-MSKKMEEVKDAKVRVVSEEFLKDVKSSNKGFQELLSLHAIS---------PWGA 480
Query: 292 --KMDPSEEAIE---SIAAELKLYGK-------RGVYKDTKLQEQGG------------- 326
K + E A++ S A +K GK K KL +GG
Sbjct: 481 EVKTEHQEVAVDGKCSKPANMKSAGKVKEEQGPSKSEKKMKLTVKGGAAVDPDSGLEDSA 540
Query: 327 KILEKDGILYNCAFSLCDQGRGMNLYCIVQLITVP-DSNLHLYYKKGKVGDDPNAEERLE 385
+ EK G +++ L D +G N Y +QL+ +S ++ G+VG + +LE
Sbjct: 541 HVFEKGGKIFSATLGLVDIVKGTNSYYKLQLLEDDRESRYWVFRSWGRVGTVIGS-NKLE 599
Query: 386 EWTGVDNAIKEFVRLFEEVTGNEFEPWEREKKFQKKPLKFYPIDMDDGVEVRHGGLGMRQ 445
+ ++A++ F+ L+EE TGN + K F K P KFYP+++D G + +R+
Sbjct: 600 QMPSKEDAVEHFLNLYEEKTGNSW----HSKNFTKYPKKFYPLEIDYGQDEE----AVRK 651
Query: 446 LGVAAA-HSKLDPVVANFMKVLCSQEVYRYALMEMGLDAPDLPIGMLSNVHLNRCEEVLQ 504
L V+A SKL + + +K++ E + A++E +D +P+G LS + +L
Sbjct: 652 LTVSAGTKSKLAKPIQDLIKMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSILN 711
Query: 505 QFIEAVKSTKETGQKAEAIWTDFSNRWFTLM---HSLRPFIFRDNQEIADHAASSFEAVR 561
+ +AV + G +++ + D SNR++TL+ ++ N E + +
Sbjct: 712 EVQQAV---SDGGSESQIL--DLSNRFYTLIPHDFGMKKPPLLSNLEYIQAKVQMLDNLL 766
Query: 562 DITVASHLIGDMSGSTLDDPLSDCYEKLACSISALEKDSDDYKMIVNYLEKTYEPVKLGD 621
DI VA L+ + DP+ YEKL I ++KDS++ K+I Y++ T+
Sbjct: 767 DIEVAYSLLRGGNEDGDKDPIDINYEKLRTDIKVVDKDSEEAKIIKQYVKNTHAATHNA- 825
Query: 622 IEYGVSVDNIFVIESNAQPS-LDEIKKLPNKVLLWCGTRSSNLLRHLQKGFLPASCSLPV 680
Y + V IF IE + K+L N+ LLW G+R++N L +G A PV
Sbjct: 826 --YDLKVVEIFRIEREGESQRYKPFKQLHNRQLLWHGSRTTNFAGILSQGLRIAPPEAPV 883
Query: 681 PGYMFGRAIVCSDAAAEAARYGFTAADRPEGFLVLAVASLGDQVTELKKPPEDTKSLEDK 740
GYMFG+ I +D +++A Y T+ P G ++L +LG+ + ELK TK L
Sbjct: 884 TGYMFGKGIYFADMVSKSANYCHTSQADPIGLILLGEVALGN-MYELKNASHITK-LPKG 941
Query: 741 KLGVKGLGRKKTDESEHFFWNDDIKVPGGRLIPSEHKNSPLEYNEYAVYDPKQTSIRFLV 800
K VKGLG+ D + D ++VP G I + ++ L YNEY VYD Q ++++L+
Sbjct: 942 KHSVKGLGKTAPDPTATTTL-DGVEVPLGNGISTGINDTCLLYNEYIVYDVAQVNLKYLL 1000
Query: 801 GVKF 804
+KF
Sbjct: 1001 KLKF 1004
>sp|Q11208|PARP_SARPE Poly [ADP-ribose] polymerase OS=Sarcophaga peregrina PE=1 SV=1
Length = 996
Score = 205 bits (521), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 203/784 (25%), Positives = 353/784 (45%), Gaps = 75/784 (9%)
Query: 66 EFCKSIEGQLSAEQMREILELNGQDS-SGSDVAVVTKCLDMLFYGPLDKCPVCNG-NLEF 123
+F I+ ++S + M +LE N + G ++ + D+L +G L C C G L F
Sbjct: 242 KFRDEIKNEMSKDDMVALLEANNMEPVKGDSEKLLDQVADLLTFGALLPCTDCKGRQLLF 301
Query: 124 DGKRYSCKGMYSEWSTCTFRTKDPPRKQEPTKLPDSVLNSPISDLAK-------RYQDPS 176
Y C G +EW+ CT K+P RK K+P + + D+ K RY PS
Sbjct: 302 HKSGYLCNGDLTEWTKCTKLLKEPERKS--CKIPGYLKYKFLKDVRKNPEVRAIRYIPPS 359
Query: 177 HRP-RRDV---------GAAVK----PFTGMTISLMGRLSRTHQYWRTTIEKHGGKVAAS 222
+++ G VK P + I+L+ R + I K GG V+
Sbjct: 360 TSTILKNISLKKGDELDGPKVKRERPPLYNIEIALIAPKER-EGIVKDRISKLGGTVSTK 418
Query: 223 PIGLTCLVASPAERERGGSSKLVEAMERGTRVVSEAWLIDSIEKQEAQPLEAYDLVTDLA 282
T +V S E SS++ +A G V+ E +L +++E+ A A + ++ ++
Sbjct: 419 ITEKTTVVLSTPEEVERMSSRMKKAKTLGLHVIPEDYL-EAVEQNGAG---AINYISSMS 474
Query: 283 PDSKGI-PWDKMDPSEEA--------IESIAAELKLYGKRG--VYKDTKLQEQGGKILEK 331
G P ++ E +S+ + L K G V D+ L++ + +
Sbjct: 475 LCDWGTDPATRITQEESKSSKSKSIYTKSVPKSMTLKIKDGLAVDPDSGLEDVAHVYVSR 534
Query: 332 DGILYNCAFSLCDQGRGMNLYCIVQLITVPDSNLHLYYKK-GKVGDDPNAEERLEEWTGV 390
+ YN + D + N + +QL+ N ++ G++G +L+ ++ +
Sbjct: 535 NKEKYNVVLGITDIQKNKNSFYKLQLLESDMKNRFWVFRSWGRIGTTIGGN-KLDNFSNL 593
Query: 391 DNAIKEFVRLFEEVTGNEFEPWEREKKFQKKPLKFYPIDMDDGVEVRHGGLGMRQLGVAA 450
+AI +F L+ E +GN FE E F K + YPID+D + + + ++A
Sbjct: 594 VDAIVQFKELYLEKSGNHFENREN---FVKVAGRMYPIDIDYAEDSK--------IDLSA 642
Query: 451 AH---SKLDPVVANFMKVLCSQEVYRYALMEMGLDAPDLPIGMLSNVHLNRCEEVLQQFI 507
H SKL V + +K++ + + +ME LD +P+G LS + +VL +
Sbjct: 643 EHDIKSKLPLSVQDIIKLMFDVDSMKRTMMEFDLDMEKMPLGKLSQKQIQSAYKVLTEIY 702
Query: 508 EAVKSTKETGQKAEAIWTDFSNRWFTLM-HSLR----PFIFRDNQEIADHAASSFEAVRD 562
E ++ G A + D +NR++TL+ H+ P + D E + +++ +
Sbjct: 703 ELIQ-----GGGTNAKFIDATNRFYTLIPHNFGTQSPPLL--DTTEQVEQLRQMLDSLIE 755
Query: 563 ITVASHLIGDMSGSTLDDPLSDCYEKLACSISALEKDSDDYKMIVNYLEKTY-EPVKLGD 621
I A L+ +P+ YE+L + L+K+S++Y ++ Y++ T+ E KL D
Sbjct: 756 IECAYSLLQTEDSKADINPIDKHYEQLKTKLEPLDKNSEEYILLQKYVKNTHAETHKLYD 815
Query: 622 IEYGVSVDNIFVIESNAQPSLDEIKKLPNKVLLWCGTRSSNLLRHLQKGFLPASCSLPVP 681
+E VD V KKL N+ LLW G+R +N L G A PV
Sbjct: 816 LEV---VDIFKVARQGEARRYKPFKKLHNRRLLWHGSRLTNFAGILSHGLKIAPPEAPVT 872
Query: 682 GYMFGRAIVCSDAAAEAARYGFTAADRPEGFLVLAVASLGDQVTELKKPPEDTKSLEDKK 741
GYMFG+ I +D +++A Y T+ G ++L+ +LGD + E TK L + K
Sbjct: 873 GYMFGKGIYFADMVSKSANYCCTSHHNSTGLMLLSEVALGDMM-ECTAAKYVTK-LPNDK 930
Query: 742 LGVKGLGRKKTDESEHFFWNDDIKVPGGRLIPSEHKNSPLEYNEYAVYDPKQTSIRFLVG 801
G GR + SE D +++P G+ I ++ S L YNE+ +YD Q +I++++
Sbjct: 931 HSCFGRGRTMPNPSESIIREDGVEIPLGKPITNDSLKSSLLYNEFIIYDIAQVNIQYMLR 990
Query: 802 VKFE 805
+ F+
Sbjct: 991 MNFK 994
>sp|P35875|PARP_DROME Poly [ADP-ribose] polymerase OS=Drosophila melanogaster GN=Parp
PE=2 SV=1
Length = 994
Score = 197 bits (500), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 192/822 (23%), Positives = 354/822 (43%), Gaps = 75/822 (9%)
Query: 29 KTQEATETPPKKTKQENNGNGGHANGKRSGDVTAEFEEFCKSIEGQLSAEQMREILELNG 88
K++E +T K + + G +R D + F I+ ++ + + +L+ N
Sbjct: 200 KSEELPDTKRAKMELSDTNEEGEKK-QRLKDQNDAYFRFRDDIKNKMKKKDIDILLKFNN 258
Query: 89 QD-SSGSDVAVVTKCLDMLFYGPLDKCPVCNG-NLEFDGKRYSCKGMYSEWSTCTFRTKD 146
Q +G + + D+L +G ++ C CN + Y C G +SEW+ C K+
Sbjct: 259 QQPVTGDTEKLFDQTADLLTFGAIESCSECNSCQFIVNKSGYICNGNHSEWTKCNKLLKE 318
Query: 147 PPRK---------------QEPTKLPDSVL--NSPIS------DLAKRYQDPSHRPRRDV 183
P R ++P + + N P + L K ++ R +
Sbjct: 319 PTRSACIVPKELKALYNFLNTVKEIPSTRIFNNFPPNKSTFSRSLLKTNKNNDVLVRPTI 378
Query: 184 GAAVKPFTGMTISLMGRLSRTHQYWRTTIEKHGGKVAASPIGLTCLVASPAERERGGSSK 243
P + S++G L H+ R IE GGK T + S + S++
Sbjct: 379 PRISPPLYNLKFSIIG-LKNQHKELRKRIENLGGKFEVKISENTIAIISTELEIQKKSTR 437
Query: 244 LVEAMERGTRVVSEAWLIDSIEKQEAQPLEAYDLVTDLAPDSKGIPWDKMDPSE--EAIE 301
+ A E G +V I+ ++ EA A + S G P E +++
Sbjct: 438 MKFAEELGIHIVP----IEFLDFVEADTEGAIKYINSTCICSWGTDPKSRIPKETTKSLN 493
Query: 302 S---------IAAELKLYGKRGVYKDTKLQEQGGKILEKDGILYNCAFSLCDQGRGMNLY 352
S ++ K+ V D+ L++ ++ + Y+ L D R N Y
Sbjct: 494 SNSIYTKSMPVSRTFKVKDGLAVDPDSGLEDIAHVYVDSNN-KYSVVLGLTDIQRNKNSY 552
Query: 353 CIVQLITVPDSNLHLYYKK-GKVGDDPNAEERLEEWTGVDNAIKEFVRLFEEVTGNEFEP 411
VQL+ + ++ G++G + +LEE+ ++A + F ++ + TGNE+E
Sbjct: 553 YKVQLLKADKKEKYWIFRSWGRIGTNI-GNSKLEEFDTSESAKRNFKEIYADKTGNEYE- 610
Query: 412 WEREKKFQKKPLKFYPIDM---DDGVEVRHGGLGMRQLGVAAAHSKLDPVVANFMKVLCS 468
+ F K+ + YPI++ DD V+H SKL+ V N +K++
Sbjct: 611 --QRDNFVKRTGRMYPIEIQYDDDQKLVKHESHFFT--------SKLEISVQNLIKLIFD 660
Query: 469 QEVYRYALMEMGLDAPDLPIGMLSNVHLNRCEEVLQQFIEAVKSTKETGQKAEAIWTDFS 528
+ LME +D +P+G LS + V+++ ++ T + +A +
Sbjct: 661 IDSMNKTLMEFHIDMDKMPLGKLSAHQIQSAYRVVKEIYNVLECGSNTAKLIDA-----T 715
Query: 529 NRWFTLM-HSL---RPFIFRDNQEIADHAASSFEAVRDITVASHLIGDMSGSTLDDPLSD 584
NR++TL+ H+ P + +Q+I D +++ +I VA +I S +PL +
Sbjct: 716 NRFYTLIPHNFGVQLPTLIETHQQIED-LRQMLDSLAEIEVAYSIIKSEDVSDACNPLDN 774
Query: 585 CYEKLACSISALEKDSDDYKMIVNYLEKTYEPVKLGDIEYGVSVDNIFVIESNAQPS-LD 643
Y ++ + AL+K+S+++ ++ Y++ T+ Y + + ++F + +
Sbjct: 775 HYAQIKTQLVALDKNSEEFSILSQYVKNTHASTHKS---YDLKIVDVFKVSRQGEARRFK 831
Query: 644 EIKKLPNKVLLWCGTRSSNLLRHLQKGFLPASCSLPVPGYMFGRAIVCSDAAAEAARYGF 703
KKL N+ LLW G+R +N + L G A P GYMFG+ I +D +++A Y
Sbjct: 832 PFKKLHNRKLLWHGSRLTNFVGILSHGLRIAPPEAPPTGYMFGKGIYFADMVSKSANYCC 891
Query: 704 TAADRPEGFLVLAVASLGDQVTELKKPPEDTKSLEDKKLGVKGLGRKKTDESEHFFWNDD 763
T+ G ++L+ +LGD + + L + K G GR D ++ + +D
Sbjct: 892 TSQQNSTGLMLLSEVALGDMME--CTSAKYINKLSNNKHSCFGRGRTMPDPTKSYIRSDG 949
Query: 764 IKVPGGRLIPSEHKNSPLEYNEYAVYDPKQTSIRFLVGVKFE 805
+++P G I EH S L YNEY VYD Q +I++L ++F+
Sbjct: 950 VEIPYGETITDEHLKSSLLYNEYIVYDVAQVNIQYLFRMEFK 991
>sp|O50017|PARP2_MAIZE Poly [ADP-ribose] polymerase 2 OS=Zea mays GN=PARP2 PE=2 SV=1
Length = 653
Score = 166 bits (420), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 225/482 (46%), Gaps = 34/482 (7%)
Query: 335 LYNCAFSLCDQGRGMNLYCIVQLI-TVPDSNLHLYYKKGKVGDDPNAEERLEEWTGV-DN 392
+Y+ + + G N + I+Q++ + + +Y + G+VG +++L + D
Sbjct: 189 IYDATLNQTNVGDNNNKFYIIQVLESDAGGSFMVYNRWGRVG--VRGQDKLHGPSPTRDQ 246
Query: 393 AIKEFVRLFEEVTGNEFEPWEREKKFQKKPLKFYPIDMDDG---VEVRHGGLGMRQLGVA 449
AI EF F T N W K F+ K+ ++MD G E+ G + +
Sbjct: 247 AIYEFEGKFHNKTNNH---WSDRKNFKCYAKKYTWLEMDYGETEKEIEKGSITDQ----- 298
Query: 450 AAHSKLDPVVANFMKVLCSQEVYRYALMEMGLDAPDLPIGMLSNVHLNRCEEVLQQFIEA 509
+KL+ +A F+ ++C+ + + ++E+G +A LP+G L + + VL++ +
Sbjct: 299 IKETKLETRIAQFISLICNISMMKQRMVEIGYNAEKLPLGKLRKATILKGYHVLKRISDV 358
Query: 510 VKSTKE------TGQKAEAIWTDFSNRWFTLMHSLRPFIFRDNQEIADHAASSFEAVRDI 563
+ TG+ I DF R +R FI Q++ EA+ +I
Sbjct: 359 ISKADRRHLEQLTGEFYTVIPHDFGFR------KMREFIIDTPQKLK-AKLEMVEALGEI 411
Query: 564 TVASHLIGDMSGSTLDDPLSDCYEKLACSISALEKDSDDYKMIVNYLEKTYEPVKLGDIE 623
+A+ L+ D S S DDPL Y++L C + LE DSD+Y MI +YL T+ G
Sbjct: 412 EIATKLLEDDS-SDQDDPLYARYKQLHCDFTPLEADSDEYSMIKSYLRNTHGKTHSG--- 467
Query: 624 YGVSVDNIFVIESNAQPS-LDEIKKLPNKVLLWCGTRSSNLLRHLQKGFLPASCSLPVPG 682
Y V + IF + + + + N++LLW G+R SN L +G A PV G
Sbjct: 468 YTVDIVQIFKVSRHGETERFQKFASTRNRMLLWHGSRLSNWAGILSQGLRIAPPEAPVTG 527
Query: 683 YMFGRAIVCSDAAAEAARYGFTAADRPEGFLVLAVASLGDQVTELKKPPEDTKSLEDKKL 742
YMFG+ + +D +++A Y + + G L+L +LGD + EL D +L KL
Sbjct: 528 YMFGKGVYFADMFSKSANYCYASEACRSGVLLLCEVALGD-MNELLNADYDANNLPKGKL 586
Query: 743 GVKGLGRKKTDESEHFFWNDDIKVPGGRLIPSEHKNSPLEYNEYAVYDPKQTSIRFLVGV 802
KG+G+ + E +D + VP G K L YNEY VY+ Q +R+++ V
Sbjct: 587 RSKGVGQTAPNMVESKVADDGVVVPLGEPKQEPSKRGGLLYNEYIVYNVDQIRMRYVLHV 646
Query: 803 KF 804
F
Sbjct: 647 NF 648
>sp|Q11207|PARP2_ARATH Poly [ADP-ribose] polymerase 2 OS=Arabidopsis thaliana GN=PARP2
PE=2 SV=1
Length = 637
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 227/490 (46%), Gaps = 30/490 (6%)
Query: 328 ILEKDGILYNCAFSLCDQGRGMNLYCIVQLITVPDSNLHLYYKK-GKVGDDPNAEERLE- 385
+L++ +Y+ + + N + ++Q++ ++ Y + G+VG + +L+
Sbjct: 161 VLQRGDDVYDAILNQTNVRDNNNKFFVLQVLESDSKKTYMVYTRWGRVG--VKGQSKLDG 218
Query: 386 EWTGVDNAIKEFVRLFEEVTGNEFEPWEREKKFQKKPLKFYPIDMDDGVEVR----HGGL 441
+ D AI+ F F + T N W K+F P + ++MD G E + +
Sbjct: 219 PYDSWDRAIEIFTNKFNDKTKNY---WSDRKEFIPHPKSYTWLEMDYGKEENDSPVNNDI 275
Query: 442 GMRQLGVAAAHSKLDPVVANFMKVLCSQEVYRYALMEMGLDAPDLPIGMLSNVHLNRCEE 501
V SKLD VA F+ ++C+ + +ME+G +A LP+G +S +++ E
Sbjct: 276 PSSSSEVKPEQSKLDTRVAKFISLICNVSMMAQHMMEIGYNANKLPLGKISKSTISKGYE 335
Query: 502 VLQQFIEAVKSTKET------GQKAEAIWTDFSNRWFTLMHSLRPFIFRDNQEIADHAAS 555
VL++ E + T G+ I DF + F+ Q++
Sbjct: 336 VLKRISEVIDRYDRTRLEELSGEFYTVIPHDFG------FKKMSQFVIDTPQKLK-QKIE 388
Query: 556 SFEAVRDITVASHLIGDMSGSTLDDPLSDCYEKLACSISALEKDSDDYKMIVNYLEKTYE 615
EA+ +I +A+ L+ G DDPL Y++L C ++ + DS+++ M+ NY+E T+
Sbjct: 389 MVEALGEIELATKLLSVDPGLQ-DDPLYYHYQQLNCGLTPVGNDSEEFSMVANYMENTHA 447
Query: 616 PVKLGDIEYGVSVDNIFVIESNAQPS-LDEIKKLPNKVLLWCGTRSSNLLRHLQKGFLPA 674
G Y V + +F + + N++LLW G+R +N L +G A
Sbjct: 448 KTHSG---YTVEIAQLFRASRAVEADRFQQFSSSKNRMLLWHGSRLTNWAGILSQGLRIA 504
Query: 675 SCSLPVPGYMFGRAIVCSDAAAEAARYGFTAADRPEGFLVLAVASLGDQVTELKKPPEDT 734
PV GYMFG+ + +D +++A Y + +G L+L +LGD + EL +
Sbjct: 505 PPEAPVTGYMFGKGVYFADMFSKSANYCYANTGANDGVLLLCEVALGD-MNELLYSDYNA 563
Query: 735 KSLEDKKLGVKGLGRKKTDESEHFFWNDDIKVPGGRLIPSEHKNSPLEYNEYAVYDPKQT 794
+L KL KG+G+ + SE D + VP G+ + L YNEY VY+ +Q
Sbjct: 564 DNLPPGKLSTKGVGKTAPNPSEAQTLEDGVVVPLGKPVERSCSKGMLLYNEYIVYNVEQI 623
Query: 795 SIRFLVGVKF 804
+R+++ VKF
Sbjct: 624 KMRYVIQVKF 633
>sp|Q5Z8Q9|PRP2A_ORYSJ Poly [ADP-ribose] polymerase 2-A OS=Oryza sativa subsp. japonica
GN=PARP2-A PE=3 SV=2
Length = 660
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 227/481 (47%), Gaps = 30/481 (6%)
Query: 335 LYNCAFSLCDQGRGMNLYCIVQ-LITVPDSNLHLYYKKGKVGDDPNAEERLE-EWTGVDN 392
+Y+ + + G N + I+Q L + + +Y + G+VG +++L ++ +
Sbjct: 194 IYDATMNQTNVGDNNNKFYIIQALESDAGGSFMVYNRWGRVG--ARGQDKLHGPFSSREQ 251
Query: 393 AIKEFVRLFEEVTGNEFEPWEREKKFQKKPLKFYPIDMDDGVEVRHGGLGMRQLGVAAAH 452
AI EF F T N W K F+ K+ ++MD G R +
Sbjct: 252 AIYEFEGKFHGKTNNH---WSDRKSFECYARKYTWLEMDYGEADRETNKKVSPSTDQIKE 308
Query: 453 SKLDPVVANFMKVLCSQEVYRYALMEMGLDAPDLPIGMLSNVHLNRCEEVLQQFIEAVKS 512
+KL+ +A+F+ ++C+ + + ++E+G ++ LP+G LS + + +VL++ +
Sbjct: 309 TKLETRIASFISLICNISMMKQQMVEIGYNSDKLPLGKLSKSTIFKGYDVLKRISNVISR 368
Query: 513 TKE------TGQKAEAIWTDFSNRWFTLMHSLRPFIFRDNQEIADHAASSFEAVRDITVA 566
TG+ I DF +R FI Q++ EA+ +I +A
Sbjct: 369 ADRRQLEQLTGEFYTVIPHDFG------FKKMREFIIDTPQKLK-AKLEMVEALGEIEIA 421
Query: 567 SHLIGDMSGSTLDDPLSDCYEKLACSISALEKDSDDYKMIVNYLEKTYEPVKLGDIEYGV 626
+ L+ D S + DDPL Y++L+C + LE S++Y MI YL T+ G
Sbjct: 422 TKLLEDDS-TDQDDPLYARYKQLSCDFTPLEVGSEEYSMIKTYLANTH-----GKTHTSY 475
Query: 627 SVDNIFVIESNAQPSLDEIKKLP---NKVLLWCGTRSSNLLRHLQKGFLPASCSLPVPGY 683
+VD + + + + ++ +K N++LLW G+R +N L +G A PV GY
Sbjct: 476 TVDVVQIFKVSRHGEMERFQKFATAGNRMLLWHGSRLTNWAGILSQGLRIAPPEAPVTGY 535
Query: 684 MFGRAIVCSDAAAEAARYGFTAADRPEGFLVLAVASLGDQVTELKKPPEDTKSLEDKKLG 743
MFG+ + +D +++A Y + + G L+L +LG ++ EL D +L KL
Sbjct: 536 MFGKGVYFADMFSKSANYCYASEACRSGVLLLCEVALG-EMNELLNADYDANNLPKGKLS 594
Query: 744 VKGLGRKKTDESEHFFWNDDIKVPGGRLIPSEHKNSPLEYNEYAVYDPKQTSIRFLVGVK 803
KG+G+ + + +E +D + VP G+ K L YNE+ VY+ Q +R+++ V
Sbjct: 595 TKGVGQTEPNTAESKITDDGVVVPLGKPKAEPSKRGSLLYNEFIVYNVDQIRMRYVLHVS 654
Query: 804 F 804
F
Sbjct: 655 F 655
>sp|O88554|PARP2_MOUSE Poly [ADP-ribose] polymerase 2 OS=Mus musculus GN=Parp2 PE=1 SV=3
Length = 559
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 222/467 (47%), Gaps = 34/467 (7%)
Query: 350 NLYCIVQLITV-PDSNLHLYYKKGKVGDDPNAEERLEEWTGVDNAIKE-FVRLFEEVTGN 407
N Y ++QL+ N ++ + G+VG + L +G N KE F + F + T N
Sbjct: 109 NKYYLIQLLEDDAQRNFSVWMRWGRVGK--TGQHSLVTCSGDLNKAKEIFQKKFLDKTKN 166
Query: 408 EFEPWEREKKFQKKPLKFYPIDMDDGVEVRHGGLGMRQLGVAAAHSKLDPVVANFMKVLC 467
WE + F+K P K+ + MD + ++ S+LD V +K++C
Sbjct: 167 N---WEDRENFEKVPGKYDMLQMDYAASTQDES-KTKEEETLKPESQLDLRVQELLKLIC 222
Query: 468 SQEVYRYALMEMGLDAPDLPIGMLSNVHLNRCEEVLQQFIEAVKSTKETGQKAEAIWTDF 527
+ + ++EM D P+G L+ + + L++ + +++ GQ A+ +
Sbjct: 223 NVQTMEEMMIEMKYDTKRAPLGKLTVAQIKAGYQSLKKIEDCIRA----GQHGRAL-VEA 277
Query: 528 SNRWFTLM-HSLR---PFIFRDNQEIADHAASSFEAVRDITVASHLIGDMSGSTLDDPLS 583
N ++T + H P + R +E++D EA+ DI +A L+ L+ PL
Sbjct: 278 CNEFYTRIPHDFGLSIPPVIRTEKELSD-KVKLLEALGDIEIALKLVKS-ERQGLEHPLD 335
Query: 584 DCYEKLACSISALEKDSDDYKMIVNYLEKTYEPVKLGDIEYGVSVDNIFVIESNAQPSLD 643
Y L C++ L+ +S+++K+I YL+ T+ P +Y +++ ++F +E +
Sbjct: 336 QHYRNLHCALRPLDHESNEFKVISQYLQSTHAPTH---KDYTMTLLDVFEVEKEGEKEAF 392
Query: 644 EIKKLPNKVLLWCGTRSSNLLRHLQKGFLPASCSLPVPGYMFGRAIVCSDAAAEAARYGF 703
+ LPN++LLW G+R SN + L G A P+ GYMFG+ I +D ++++A Y F
Sbjct: 393 R-EDLPNRMLLWHGSRLSNWVGILSHGLRVAPPEAPITGYMFGKGIYFADMSSKSANYCF 451
Query: 704 TAADRPEGFLVLAVASLGDQVTELKKPPEDTKSLEDKKLGVKGLGRKKTDESEHFFWNDD 763
+ + G L+L+ +LG Q EL + + L K KG+G K HF +
Sbjct: 452 ASRLKNTGLLLLSEVALG-QCNELLEANPKAQGLLRGKHSTKGMG-KMAPSPAHFITLNG 509
Query: 764 IKVP------GGRLIPSEHKNSPLEYNEYAVYDPKQTSIRFLVGVKF 804
VP G L P + L YNE+ VY P Q +R+L+ ++F
Sbjct: 510 STVPLGPASDTGILNPEGYT---LNYNEFIVYSPNQVRMRYLLKIQF 553
>sp|Q9UGN5|PARP2_HUMAN Poly [ADP-ribose] polymerase 2 OS=Homo sapiens GN=PARP2 PE=1 SV=2
Length = 583
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 131/470 (27%), Positives = 227/470 (48%), Gaps = 36/470 (7%)
Query: 350 NLYCIVQLITV-PDSNLHLYYKKGKVGDDPNAEERLEEWTGVDNAIKE-FVRLFEEVTGN 407
N Y ++QL+ N ++ + G+VG + L +G N KE F + F + T N
Sbjct: 129 NKYYLIQLLEDDAQRNFSVWMRWGRVGK--MGQHSLVACSGNLNKAKEIFQKKFLDKTKN 186
Query: 408 EFEPWEREKKFQKKPLKFYPIDMDDGVEVRHGGLGMRQLGVAAA---HSKLDPVVANFMK 464
WE +KF+K P K+ + MD + ++ + + S+LD V +K
Sbjct: 187 N---WEDREKFEKVPGKYDMLQMDYATNTQDEEETKKEESLKSPLKPESQLDLRVQELIK 243
Query: 465 VLCSQEVYRYALMEMGLDAPDLPIGMLSNVHLNRCEEVLQQFIEAVKSTKETGQKAEAIW 524
++C+ + +MEM + P+G L+ + + L++ + +++ GQ A+
Sbjct: 244 LICNVQAMEEMMMEMKYNTKKAPLGKLTVAQIKAGYQSLKKIEDCIRA----GQHGRAL- 298
Query: 525 TDFSNRWFTLM---HSLR-PFIFRDNQEIADHAASSFEAVRDITVASHLIGDMSGSTLDD 580
+ N ++T + LR P + R +E+++ EA+ DI +A L+ S +
Sbjct: 299 MEACNEFYTRIPHDFGLRTPPLIRTQKELSE-KIQLLEALGDIEIAIKLVKTELQSP-EH 356
Query: 581 PLSDCYEKLACSISALEKDSDDYKMIVNYLEKTYEPVKLGDIEYGVSVDNIFVIESNAQP 640
PL Y L C++ L+ +S ++K+I YL+ T+ P +Y +++ ++F +E + +
Sbjct: 357 PLDQHYRNLHCALRPLDHESYEFKVISQYLQSTHAPT---HSDYTMTLLDLFEVEKDGEK 413
Query: 641 SLDEIKKLPNKVLLWCGTRSSNLLRHLQKGFLPASCSLPVPGYMFGRAIVCSDAAAEAAR 700
+ L N++LLW G+R SN + L G A P+ GYMFG+ I +D ++++A
Sbjct: 414 EAFR-EDLHNRMLLWHGSRMSNWVGILSHGLRIAPPEAPITGYMFGKGIYFADMSSKSAN 472
Query: 701 YGFTAADRPEGFLVLAVASLGDQVTELKKPPEDTKSLEDKKLGVKGLGRKKTDESEHFFW 760
Y F + + G L+L+ +LG Q EL + + L K KGLG K S HF
Sbjct: 473 YCFASRLKNTGLLLLSEVALG-QCNELLEANPKAEGLLQGKHSTKGLG-KMAPSSAHFVT 530
Query: 761 NDDIKVP------GGRLIPSEHKNSPLEYNEYAVYDPKQTSIRFLVGVKF 804
+ VP G L P + L YNEY VY+P Q +R+L+ V+F
Sbjct: 531 LNGSTVPLGPASDTGILNPDGYT---LNYNEYIVYNPNQVRMRYLLKVQF 577
>sp|Q0JMY1|PRP2B_ORYSJ Poly [ADP-ribose] polymerase 2-B OS=Oryza sativa subsp. japonica
GN=PARP2-B PE=3 SV=2
Length = 605
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 209/469 (44%), Gaps = 39/469 (8%)
Query: 360 VPDSNLHLYYKKGKVGDDPNAEERLEEWTGVDNAIKEFVRLFEEVTGNEFEPWEREKKFQ 419
+PD N+ Y +VGD+ + G +N ++ E G F + R +
Sbjct: 146 IPD-NIKTAYHVLQVGDEIYDATMNQTNVGGNNNKFYIIQALESDAGGNFMVYSRWGRVG 204
Query: 420 KKPL-------------KFYPIDMDDGVEVRHGGLGMRQLGVAAAHSKLDPVVANFMKVL 466
+ + K+ ++MD G + + +KL+ A+F+ ++
Sbjct: 205 TRDIHWSYRKGSHCYAHKYTWLEMDYGEADKETNKKTSSITNQLEETKLETRTASFISLI 264
Query: 467 CSQEVYRYALMEMGLDAPDLPIGMLSNVHLNRCEEVLQQFIEAVKST--------KETGQ 518
C + + ++E+G +A LP+G LS + + +VL++ + + TG+
Sbjct: 265 CDISMMKQQMVEIGYNADKLPLGKLSKSTILKGYDVLKRISNVISGADTDRTQLEQLTGE 324
Query: 519 KAEAIWTDFSNRWFTLMHSLRPFIFRDNQEIADHAASSFEAVRDITVASHLIGDMSGSTL 578
I DF + + FI Q++ EA+ +I +A L+ D S S
Sbjct: 325 FYSVIPHDFGFK------KMSEFIIDTPQKLK-AKLEMVEALSEIEIAIKLLEDDS-SDQ 376
Query: 579 DDPLSDCYEKLACSISALEKDSDDYKMIVNYLEKTYEPVKLGDIEYGVSVDNIFVIESNA 638
D PL Y++ C + LE DS++Y MI YL T+ G G +VD + + + +
Sbjct: 377 DHPLYARYKQFCCDFTPLEVDSEEYSMIKTYLTNTH-----GKTHTGYTVDIVQIFKVSR 431
Query: 639 QPSLDEIKKLP---NKVLLWCGTRSSNLLRHLQKGFLPASCSLPVPGYMFGRAIVCSDAA 695
++ +K N++LLW G+R +N L +G A P+ G+MFG+ + +D
Sbjct: 432 LGEMERFQKFASAGNRMLLWHGSRLTNWAGILSQGLRIAPPEAPISGFMFGKGVYFADMF 491
Query: 696 AEAARYGFTAADRPEGFLVLAVASLGDQVTELKKPPEDTKSLEDKKLGVKGLGRKKTDES 755
+++A Y + G ++L +LG ++ EL +L + KL KG+G+ + + +
Sbjct: 492 SKSANYCCASEACKSGVMLLCEVALG-EMNELLYGDFGADNLPNGKLSTKGVGQTEPNIA 550
Query: 756 EHFFWNDDIKVPGGRLIPSEHKNSPLEYNEYAVYDPKQTSIRFLVGVKF 804
E +D + +P G+ + L YNEY VY+ Q +R+++ V F
Sbjct: 551 ESKITDDGMVIPLGKPEKVPSRRGSLMYNEYIVYNVDQIRMRYILNVNF 599
>sp|Q9N4H4|PME1_CAEEL Poly(ADP-ribose) polymerase pme-1 OS=Caenorhabditis elegans
GN=pme-1 PE=2 SV=1
Length = 945
Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 177/747 (23%), Positives = 295/747 (39%), Gaps = 123/747 (16%)
Query: 83 ILELNGQD-SSGSD--VAVVTKCLDMLFYGPLDKCPVC-NGNLEFDG--KRYSCKGMYSE 136
IL N QD G D V+ + +D +G C C NG + ++ + Y C G +E
Sbjct: 295 ILRENEQDIPEGHDPTAQVIERLVDNALFGCPIICQTCSNGKIVYNSSCRTYVCTGYATE 354
Query: 137 WSTCTFRTKDPPRKQEPTKLPDSVLNSPISDLAKRYQDPSHRPRRDVGAAVKPFTGMTIS 196
+S CT+ +K+ P + P V SHR
Sbjct: 355 YSKCTYESKN------PIRTPFEV---------------SHR------------------ 375
Query: 197 LMGRLSRTHQYWRTTIEKHGGKVAASPIGLTCLVASPAERERGGSSKLVEAMERGTRVVS 256
L+ H+ + ++ +V + +GG+ RG + +
Sbjct: 376 ----LTEKHKLQDIVFNQMSERLYIGEEDGESVVKIDKRKSKGGT--------RGEQFIY 423
Query: 257 EAWLIDSIEKQEAQPLEAYDLV-TDLAPDSKGIPWDKMDPSEEAIESIAAELKLYGKRGV 315
A DS P++ DL T+ KG D A+ L + V
Sbjct: 424 AAEAFDSTNNV---PIKVGDLTSTNTHIIKKGTVVD-------------AKFALADRCHV 467
Query: 316 YKDTKLQEQGGKILEKDGILYNCAFSLCDQGRGMNLYCIVQLITVPD-SNLHLYYKKGKV 374
+K+ E DG LY S D + N Y +QL+ N +++ G+V
Sbjct: 468 FKN-----------EIDGSLYQATLSFTDLTQNKNSYYKIQLLKDDQRENYYVFRSWGRV 516
Query: 375 GDDPNAEERLEEWTGVDNAIKEFVRLFEEVTGNEFEPWEREKKFQKKPLKFYPIDMDDGV 434
G + + E ++ + AI +F +F E T N+ W K F+K P F ++ D
Sbjct: 517 GTEVGGNKH-ESYSNSNEAILKFQDVFHEKTKND---WIYRKHFRKMPGMFSYVETDYSE 572
Query: 435 EVRHGGLGMRQLGVAAAHSKLDPVVANFMKVLCSQEVYRYALMEMGLDAPDLPIGMLSNV 494
+ + + VV + V E + AL +D +P+G LS+
Sbjct: 573 FAQITDTEITPGSKTLLPKSVKEVVMSIFDV----ENMKSALKSFEMDVNKMPLGRLSHN 628
Query: 495 HLNRCEEVLQQFIEAVKSTKETGQKAEAIWTDFSNRWFTLM-HSLRPFIFR-----DNQE 548
+N EVL + + + DFSN+++T++ H+ F R D+
Sbjct: 629 QINLAFEVLNDISDLLVKLPIDASRI----LDFSNKFYTIIPHN---FGMRVPEPIDSFH 681
Query: 549 IADHAASSFEAVRDITVASHLI--GDMSGSTL--DDPLSDCYEKLACSISALEKDSDDYK 604
+ A+ DI A I GD+ ST DP+ Y+KL C + L++ DD+
Sbjct: 682 KIKEKNNMLNALLDIKFAYDQISGGDVPASTSLGIDPVDINYQKLKCIMEPLQQGCDDWN 741
Query: 605 MIVNYLEKTYEPVKLGDIEYGVSVDNIFVIESNAQPSLDEIKK-LPNKVLLWCGTRSSNL 663
MI YL+ T+ + + V+ I +++ N + K+ + N+ LLW G+ N
Sbjct: 742 MIHQYLKNTHGAT------HDLKVELIDILKLNRDNESSKFKRHIGNRRLLWHGSGKMNF 795
Query: 664 LRHLQKGFLPASCSLPVPGYMFGRAIVCSDAAAEAARYGFTAADRPEGFLVLAVASLGDQ 723
L +G A PV GYMFG+ + +D +++ Y A + E +L+L +LG+
Sbjct: 796 AGILGQGLRIAPPEAPVSGYMFGKGVYFADMFSKSFFYC-RANAKEEAYLLLCDVALGNV 854
Query: 724 VTELKKPPEDTKSLEDKKLGVKGLGRKKTDESEHFFWNDDIKVPGG----RLIPSEHKNS 779
+ ++L V+GLGR+ E + D +P G +L + +
Sbjct: 855 QQLMASKNVSRQTLPAGFQSVQGLGRQCPREIGSYNHPDGYTIPLGLTYMQLQGKQDVDY 914
Query: 780 PLEYNEYAVYDPKQTSIRFLVGVKFEE 806
L YNE+ VYD Q +++LV VK
Sbjct: 915 HLLYNEFIVYDVDQIQLKYLVRVKMHH 941
>sp|Q9Y6F1|PARP3_HUMAN Poly [ADP-ribose] polymerase 3 OS=Homo sapiens GN=PARP3 PE=1 SV=3
Length = 533
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 124/538 (23%), Positives = 223/538 (41%), Gaps = 55/538 (10%)
Query: 291 DKMDPSEEAIESIAAELKLYGKRGVYKDTKLQEQGGKILEKDGILYNCAFSLCDQGRGMN 350
D + EA+++I AE ++ V L G + +D YNC + + N
Sbjct: 27 DPFRSTAEALKAIPAEKRIIR---VDPTCPLSSNPGTQVYED---YNCTLNQTNIENNNN 80
Query: 351 LYCIVQLITVPDSNLHLYYKKGKVGDDPNAEERLEEWTGVDNAIKEFVRLFEEVTGNEFE 410
+ I+QL+ + + G+VG+ + ++ +T +++A K+F + F E T N
Sbjct: 81 KFYIIQLLQDSNRFFTCWNHWGRVGE--VGQSKINHFTRLEDAKKDFEKKFREKTKNN-- 136
Query: 411 PWEREKKFQKKPLKFYPIDMDDGVEVRHGGLGM-----RQLGVAAAHSKLDPVVANFMKV 465
W F P K+ I++ E + + + R + LDP +
Sbjct: 137 -WAERDHFVSHPGKYTLIEVQAEDEAQEAVVKVDRGPVRTVTKRVQPCSLDPATQKLITN 195
Query: 466 LCSQEVYRYALMEMGLDAPDLPIGMLSNVHLNRCEEVLQQFIEAVKSTKETGQKAEAIWT 525
+ S+E+++ + M LD +P+G LS + R E L+ EA+K + GQ E
Sbjct: 196 IFSKEMFKNTMALMDLDVKKMPLGKLSKQQIARGFEALEALEEALKGPTDGGQSLE---- 251
Query: 526 DFSNRWFTLM-----HSLRPFIFRDNQEIADHAASSFEAVRDITVASHLIG----DMSGS 576
+ S+ ++T++ HS P I ++ E+ + DI +A L + +
Sbjct: 252 ELSSHFYTVIPHNFGHSQPPPI--NSPELLQAKKDMLLVLADIELAQALQAVSEQEKTVE 309
Query: 577 TLDDPLSDCYEKLACSISALEKDSDDYKMIVNYLEKTYEPVKLGDIEYGVSVDNIF-VIE 635
+ PL Y+ L C + L+ + +YK+I YLE+T G ++ +I+ V +
Sbjct: 310 EVPHPLDRDYQLLKCQLQLLDSGAPEYKVIQTYLEQT------GSNHRCPTLQHIWKVNQ 363
Query: 636 SNAQPSLDEIKKLPNKVLLWCGTRSSNLLRHLQKGFLPASCSLPVPGYMFGRAIVCSDAA 695
+ KL N+ LLW GT + + L G +P G G+ I +
Sbjct: 364 EGEEDRFQAHSKLGNRKLLWHGTNMAVVAAILTSGLR----IMPHSGGRVGKGIYFASEN 419
Query: 696 AEAARY--GFTAADRPEGFLVLAVASLGDQV------TELKKPPEDTKSLEDKKLGVKGL 747
+++A Y G G++ L +LG + LK PP S+ +
Sbjct: 420 SKSAGYVIGMKCGAHHVGYMFLGEVALGREHHINTDNPSLKSPPPGFDSV----IARGHT 475
Query: 748 GRKKTDESEHFFWNDDIKVPGGRLIP-SEHKNSPLEYNEYAVYDPKQTSIRFLVGVKF 804
T ++E + VP G+ +P E +S +EY +Y Q +R+L+ V
Sbjct: 476 EPDPTQDTELELDGQQVVVPQGQPVPCPEFSSSTFSQSEYLIYQESQCRLRYLLEVHL 533
>sp|Q08824|PARP1_ONCMA Poly [ADP-ribose] polymerase 1 (Fragment) OS=Oncorhynchus masou
GN=parp1 PE=2 SV=2
Length = 135
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 4/127 (3%)
Query: 562 DITVASHLIGDMSGSTLDDPLSDCYEKLACSISALEKDSDDYKMIVNYLEKTYEPVKLGD 621
DI VA L+ + DP+ YEKL I ++K + + ++I+ Y++ T+
Sbjct: 12 DIEVAYSLLKGGAEDNKKDPIDINYEKLKTKIEVVDKTTKEAEIILQYVKNTHAATH--- 68
Query: 622 IEYGVSVDNIF-VIESNAQPSLDEIKKLPNKVLLWCGTRSSNLLRHLQKGFLPASCSLPV 680
Y + V+ IF ++ + LPN+ LLW G+R++N L +G A PV
Sbjct: 69 NTYTLVVEEIFKIVREGEYQKYRPFQDLPNRQLLWHGSRATNYAGILSQGLRIAPPEAPV 128
Query: 681 PGYMFGR 687
GYMFG+
Sbjct: 129 TGYMFGK 135
>sp|Q9TXQ1|PME5_CAEEL Poly(ADP-ribose) polymerase pme-5 OS=Caenorhabditis elegans GN=pme-5
PE=2 SV=1
Length = 2276
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 104/493 (21%), Positives = 203/493 (41%), Gaps = 63/493 (12%)
Query: 346 GR-GMNLYCIVQLITVPDSNLHLYYKK-GKVGDDPNAEERLEEWTGVDNAIKEFVRLFEE 403
GR G + + +Q+I D+ L + + G++G E + + ++ A KEF +F+
Sbjct: 1812 GRCGFHNFYRMQIIKRRDAELFILFTNWGRIGSGM-GEFQTTPFNSLELAAKEFKSIFKS 1870
Query: 404 VTGNEFEPWEREKKFQKKPLKFYPIDMDDGVEVRHGGLGMRQLGVAAAHSKLDPVVANFM 463
+GNE+ P F+ P K+ ++ D L +L +++ DP+
Sbjct: 1871 KSGNEWAPLA---NFRDMPKKYRLVETDSTPT----SLAEIEL-TWKKNTEKDPIRRMIA 1922
Query: 464 KVLCSQEVYRYALMEMGLDAPDLPIGMLSNVHLNRCEEVL----------QQFIEAVKST 513
+ ++ + YA P G + ++ + + VL +Q +EA
Sbjct: 1923 DISDAKTLKTYASQVQMYGGSSQPFGRFTKENIEKAKLVLDKLEKNANRIKQMVEAQTGV 1982
Query: 514 KETGQKAEAIWT-DFSNRWFTLM----HSLRPFIFRDN-QEIADHAASSFEAVRDITVAS 567
E+ I T + S +++L+ + DN +EIA H A ++I A+
Sbjct: 1983 VESNLLDAYITTSELSGDYYSLIPSGEYEFSNLTRLDNVEEIARHRAR-LNRCQEIETAT 2041
Query: 568 HLIGDMSGSTLDDPLSDCYEKLACSISALEKDSDDYKMIVNYLEKTYEPVKLGDIEYGVS 627
L+ D + + C DSD + ++ ++ + K ++ +
Sbjct: 2042 RLLCAAEFRQDLDRVDYIRSAIQCEYRLETPDSDISQRLLQWIHNSGG--KQAKVKMILE 2099
Query: 628 VDNIFVIESNAQPSLDEIKKLPNKVLLWCGTRSSNLLRHLQKGFL---PASCSLPVPGYM 684
+ + E +P +++ N+ LW GT+++NL+ L+ GFL P++C G +
Sbjct: 2100 ISPMLSTEK-FEPFVND----DNQKFLWHGTKATNLMSILKNGFLIDPPSACK---NGNL 2151
Query: 685 FGRAIVCSDAAAEAARYGFTAADRPEGFLVLAVASLGDQVTELKKPP-----EDTKSLED 739
FG I +D+ ++ Y +A LV A LG +V L P + + S E
Sbjct: 2152 FGSGIYLADSFEKSTHYCQPSAGGINYMLVCQTA-LG-KVRTLDTIPYHYMNQSSSSAEK 2209
Query: 740 KKLGVKGLGRKKTDESEHFFWNDDIKVPGGRLIP---------SEHKNSPLEYNEYAVYD 790
+ + +G + S ND + +P L+P S + L+++EY V +
Sbjct: 2210 YEDTLHYIGDRFPAGS---LTNDGVGMP---LLPLRKRDPIQGSNYGFGTLDFSEYIVRN 2263
Query: 791 PKQTSIRFLVGVK 803
P + +++V K
Sbjct: 2264 PNRVLPKYIVMYK 2276
>sp|Q09525|PME2_CAEEL Poly(ADP-ribose) polymerase pme-2 OS=Caenorhabditis elegans
GN=pme-2 PE=2 SV=1
Length = 538
Score = 41.6 bits (96), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 160/408 (39%), Gaps = 100/408 (24%)
Query: 462 FMKVLCSQEVYRYALMEMGLD-APDLPIGMLSNVHLNRCEEVLQQFIEAV------KSTK 514
MK +C ++V+ L ++ + A PI LS L E+L + E++ +ST+
Sbjct: 158 LMKCICDEDVHLGLLKQLKFNEAFGRPIDCLSLAQLTTGYEILSKIEESIGGKSARRSTR 217
Query: 515 ETGQKAEAIWTDFS--------NRWFTLM-HSLRPFIFRDNQEIADHAASSFE-----AV 560
+ A+ + S N++++L+ HS F F +I HA E A+
Sbjct: 218 GRPRVADRVLAVKSDGPSLHDINKYYSLIPHS---FGFCVPPKIDSHAKIQAERELLDAL 274
Query: 561 RDITVASHLIGDMSGS-TLDDPLSDCYEKLACSISALEKDSDDYKMIVNYLEKTYEPV-- 617
+ AS + D+ + + D YE+L C +LE E +
Sbjct: 275 KGSIEASLELKDLKKTASSKDIYQRLYERLPC-----------------HLEPVSEEIAG 317
Query: 618 KLGDIE--------YGVSVDNIFVI-ESNAQPSLD--EIKKLP----------------- 649
K+GD Y +S+ + F + + N P+ E++++P
Sbjct: 318 KIGDCLAMRGPTHCYKLSLIDAFELKDPNEIPTEAPVEVQEVPKKRGRKSTKTAAPTVPP 377
Query: 650 --NKVLLWCGTRSSNLLRHLQKGFLPASCSLPVP---GYMFGRAIVCSDAAAEAARYGFT 704
K LLW GTR +N+ L G PV G MFG + ++ ++A Y
Sbjct: 378 PTTKRLLWHGTRVTNVFSILMNGL-----QFPVGDRCGLMFGNGVYFANVPTKSANYCCP 432
Query: 705 AADRPEGFLVLAVASLGDQVTELKKPPEDTKSLEDKKLGVKGLGRKKTDESEHFFWNDDI 764
A + L+ V + V + D K + KK V G+ D +
Sbjct: 433 EASKRVFMLLCEVETANPLVLYESEIDADEKMEKAKKTSVYAAGKHTP--------RDTV 484
Query: 765 KVPGGRLIPSEHKN-------SPLEYNEYAVYDPKQTSIRFLVGVKFE 805
++ G IP+ N + L Y+EY +++ + I+++V VK +
Sbjct: 485 EING---IPAFKSNLETIEEETRLLYDEYVMFNKEHFKIKYVVEVKVD 529
>sp|B8ICE5|DNLJ_METNO DNA ligase OS=Methylobacterium nodulans (strain ORS2060 / LMG
21967) GN=ligA PE=3 SV=1
Length = 829
Score = 41.6 bits (96), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 185 AAVKPFTGMTISLMGRLSR-THQYWRTTIEKHGGKVAASPIGLTCLV-ASPAERERGGSS 242
AA F+G T+ G L R T + T E+ G KV+ S T LV A P G S
Sbjct: 750 AAAAVFSGQTVVFTGSLERMTRSEAKATAERLGAKVSGSVSAKTDLVVAGP-----GAGS 804
Query: 243 KLVEAMERGTRVVSEA-WL 260
KL +A + G RV+SEA WL
Sbjct: 805 KLKDAEKHGVRVISEAEWL 823
>sp|B0UQ51|DNLJ_METS4 DNA ligase OS=Methylobacterium sp. (strain 4-46) GN=ligA PE=3 SV=1
Length = 827
Score = 38.5 bits (88), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 190 FTGMTISLMGRLSR-THQYWRTTIEKHGGKVAASPIGLTCLV-ASPAERERGGSSKLVEA 247
F+G T+ G L R T + T E+ G KV+ S T LV A P G +KL +A
Sbjct: 753 FSGRTVVFTGSLERMTRSEAKATAERLGAKVSGSVSAKTDLVVAGP-----GAGTKLKDA 807
Query: 248 MERGTRVVSEA-WL 260
+ G RV+SEA WL
Sbjct: 808 EKHGVRVISEAEWL 821
>sp|A0RPY7|DNLJ_CAMFF DNA ligase OS=Campylobacter fetus subsp. fetus (strain 82-40)
GN=ligA PE=3 SV=1
Length = 645
Score = 38.1 bits (87), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 190 FTGMTISLMGRLSRTHQYWRTTIEKHGGKVAASPIGLTCLVASPAERERGGSSKLVEAME 249
F+G T+ + G LSR+ ++ +E +G KV++S T V E SKL +A E
Sbjct: 575 FSGKTVVITGTLSRSRDEFKAELESYGAKVSSSVSKKTDFVLYGNE----AGSKLEKANE 630
Query: 250 RGTRVVSEA 258
G R + E+
Sbjct: 631 LGVRAIDES 639
>sp|A2RJS9|DAPB_LACLM 4-hydroxy-tetrahydrodipicolinate reductase OS=Lactococcus lactis
subsp. cremoris (strain MG1363) GN=dapB PE=3 SV=1
Length = 260
Score = 37.7 bits (86), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 18/98 (18%)
Query: 453 SKLDPVVANFMKVLCSQEVYRYALMEMGLDAPDLPIGMLSNVHLNRCEEVLQQFIEAVKS 512
+K+ VVA F + S V +M L+AP+ + L L R EEV + F V +
Sbjct: 4 NKIKVVVAGFRGKMGSTAV------QMILNAPNFELVAL----LGRKEEVSEAFDVPVFN 53
Query: 513 TKETGQKAEA-IWTD-------FSNRWFTLMHSLRPFI 542
KE + EA +W D + N +F L H LRP +
Sbjct: 54 RKEELENIEADVWLDLTAPEVAYENTYFALEHGLRPVV 91
>sp|A7H8A2|DNLJ_ANADF DNA ligase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=ligA PE=3
SV=1
Length = 699
Score = 37.7 bits (86), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 178 RPRRDVGAAVKPFTGMTISLMGRLSR-THQYWRTTIEKHGGKVAASPIGLTCLVASPAER 236
RP + A PF G T+ L G L+ + + IE+ GGKV+ S T LV + AE
Sbjct: 614 RPAPETVDAGGPFAGKTVVLTGGLAALSRDDAKAEIERRGGKVSGSVSRKTDLVVAGAE- 672
Query: 237 ERGGSSKLVEAMERGTRVVSEAWLIDSIEK 266
SKL +A G RVV E + +E+
Sbjct: 673 ---AGSKLEKAQALGVRVVGEEEFLRMLEE 699
>sp|Q2INT9|DNLJ_ANADE DNA ligase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=ligA
PE=3 SV=1
Length = 687
Score = 37.7 bits (86), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 178 RPRRDVGAAVKPFTGMTISLMGRLS-RTHQYWRTTIEKHGGKVAASPIGLTCLVASPAER 236
RP +V A PF G T+ L G LS + + +E+ GGKV+ S T LV + E
Sbjct: 602 RPEPEVVEARGPFAGKTVVLTGGLSAMSRDDAKAEVERRGGKVSGSVSRKTDLVVAGEE- 660
Query: 237 ERGGSSKLVEAMERGTRVVSE 257
SKL +A G RVV E
Sbjct: 661 ---AGSKLEKARSLGVRVVGE 678
>sp|Q12AD4|DNLJ_POLSJ DNA ligase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=ligA
PE=3 SV=1
Length = 706
Score = 37.4 bits (85), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 186 AVKPFTGMTISLMGRL-SRTHQYWRTTIEKHGGKVAASPIGLTCLVASPAERERGGSSKL 244
A KP +G T + G L + + + +E GGKVA S T V + E SKL
Sbjct: 625 APKPLSGKTFVITGTLPTLSRDEAKDKVEAAGGKVAGSVSKKTDYVVAGTE----AGSKL 680
Query: 245 VEAMERGTRVVSEAWLIDSIEKQEAQ 270
V+A E G V+ EA L+ + EA+
Sbjct: 681 VKAQELGIAVIDEAALMRLLASAEAE 706
>sp|Q5JTW2|CEP78_HUMAN Centrosomal protein of 78 kDa OS=Homo sapiens GN=CEP78 PE=1 SV=1
Length = 689
Score = 37.4 bits (85), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 56 RSGDVTAEFEEFCKSIEGQLSAEQMREILELNGQDSSGSDVAVVTKCLD---MLFYGPLD 112
R DVT + CK+++G LS + + LELNG D+ ++ K L+ L + L
Sbjct: 100 RYKDVTFQL---CKALKGCLSISSVLKNLELNGLILRERDLTILAKGLNKSASLVHLSLA 156
Query: 113 KCPVCNGNLEFDGKRYSCKGMYS 135
CP+ +G LE C+G+ S
Sbjct: 157 NCPIGDGGLEI-----ICQGIKS 174
>sp|B1IBQ3|DNLJ_STRPI DNA ligase OS=Streptococcus pneumoniae (strain Hungary19A-6)
GN=ligA PE=3 SV=1
Length = 652
Score = 37.4 bits (85), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 190 FTGMTISLMGRLSRTHQY-WRTTIEKHGGKVAASPIGLTCLVASPAERERGGSSKLVEAM 248
+G+T+ L G+L R + ++ +E G KV S T LV A+ SKL +A
Sbjct: 582 LSGLTVVLTGKLERLKRSEAKSKLESLGAKVTGSVSKKTDLVVVGAD----AGSKLQKAQ 637
Query: 249 ERGTRVVSEAWL 260
E G +V EAWL
Sbjct: 638 ELGIQVRDEAWL 649
>sp|C1C7B1|DNLJ_STRP7 DNA ligase OS=Streptococcus pneumoniae (strain 70585) GN=ligA PE=3
SV=1
Length = 652
Score = 37.0 bits (84), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 190 FTGMTISLMGRLSRTHQY-WRTTIEKHGGKVAASPIGLTCLVASPAERERGGSSKLVEAM 248
+G+T+ L G+L R + ++ +E G KV S T LV A+ SKL +A
Sbjct: 582 LSGLTVVLTGKLERLKRSEAKSKLESLGAKVTGSVSKKTDLVVVGAD----AGSKLQKAQ 637
Query: 249 ERGTRVVSEAWL 260
E G +V EAWL
Sbjct: 638 ELGIQVRDEAWL 649
>sp|B2UL69|DNLJ_AKKM8 DNA ligase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=ligA
PE=3 SV=1
Length = 794
Score = 37.0 bits (84), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 190 FTGMTISLMGRLSRTHQYWRTTIEKHGGK-VAASPIGLTCLVASPAERERGGSSKLVEAM 248
+G T + G LS Y+ I HGGK A +CL+A GG SK +A+
Sbjct: 722 LSGKTFVITGTLSHPRDYFEQLIASHGGKATGAISKSTSCLLAG-----NGGGSKRDKAL 776
Query: 249 ERGTRVVSE 257
+ G V+SE
Sbjct: 777 KLGVPVISE 785
>sp|C1CRL7|DNLJ_STRZT DNA ligase OS=Streptococcus pneumoniae (strain Taiwan19F-14)
GN=ligA PE=3 SV=1
Length = 652
Score = 37.0 bits (84), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 190 FTGMTISLMGRLSRTHQY-WRTTIEKHGGKVAASPIGLTCLVASPAERERGGSSKLVEAM 248
+G+T+ L G+L R + ++ +E G KV S T LV A+ SKL +A
Sbjct: 582 LSGLTVVLTGKLERLKRSEAKSKLESLGAKVTGSVSKKTDLVVVGAD----AGSKLQKAQ 637
Query: 249 ERGTRVVSEAWL 260
E G +V EAWL
Sbjct: 638 ELGIQVRDEAWL 649
>sp|Q8DPS9|DNLJ_STRR6 DNA ligase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
GN=ligA PE=3 SV=1
Length = 652
Score = 37.0 bits (84), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 190 FTGMTISLMGRLSRTHQY-WRTTIEKHGGKVAASPIGLTCLVASPAERERGGSSKLVEAM 248
+G+T+ L G+L R + ++ +E G KV S T LV A+ SKL +A
Sbjct: 582 LSGLTVVLTGKLERLKRSEAKSKLESLGAKVTGSVSKKTDLVVVGAD----AGSKLQKAQ 637
Query: 249 ERGTRVVSEAWL 260
E G +V EAWL
Sbjct: 638 ELGIQVRDEAWL 649
>sp|B5E4M9|DNLJ_STRP4 DNA ligase OS=Streptococcus pneumoniae serotype 19F (strain G54)
GN=ligA PE=3 SV=1
Length = 652
Score = 37.0 bits (84), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 190 FTGMTISLMGRLSRTHQY-WRTTIEKHGGKVAASPIGLTCLVASPAERERGGSSKLVEAM 248
+G+T+ L G+L R + ++ +E G KV S T LV A+ SKL +A
Sbjct: 582 LSGLTVVLTGKLERLKRSEAKSKLESLGAKVTGSVSKKTDLVVVGAD----AGSKLQKAQ 637
Query: 249 ERGTRVVSEAWL 260
E G +V EAWL
Sbjct: 638 ELGIQVRDEAWL 649
>sp|Q04KH2|DNLJ_STRP2 DNA ligase OS=Streptococcus pneumoniae serotype 2 (strain D39 /
NCTC 7466) GN=ligA PE=3 SV=1
Length = 652
Score = 37.0 bits (84), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 190 FTGMTISLMGRLSRTHQY-WRTTIEKHGGKVAASPIGLTCLVASPAERERGGSSKLVEAM 248
+G+T+ L G+L R + ++ +E G KV S T LV A+ SKL +A
Sbjct: 582 LSGLTVVLTGKLERLKRSEAKSKLESLGAKVTGSVSKKTDLVVVGAD----AGSKLQKAQ 637
Query: 249 ERGTRVVSEAWL 260
E G +V EAWL
Sbjct: 638 ELGIQVRDEAWL 649
>sp|A4W1W6|DNLJ_STRS2 DNA ligase OS=Streptococcus suis (strain 98HAH33) GN=ligA PE=3 SV=1
Length = 652
Score = 37.0 bits (84), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 190 FTGMTISLMGRLSRTHQY-WRTTIEKHGGKVAASPIGLTCLVASPAERERGGSSKLVEAM 248
+GMT+ L G+L R + + +E G VA S T LV + + SKL +A
Sbjct: 582 LSGMTVVLTGKLERMKRNEAKAKLEALGANVAGSVSKKTNLVVAGTD----AGSKLTKAQ 637
Query: 249 ERGTRVVSEAWL 260
E G + EAWL
Sbjct: 638 ELGIEIKDEAWL 649
>sp|C1CKI0|DNLJ_STRZP DNA ligase OS=Streptococcus pneumoniae (strain P1031) GN=ligA PE=1
SV=1
Length = 652
Score = 37.0 bits (84), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 190 FTGMTISLMGRLSRTHQY-WRTTIEKHGGKVAASPIGLTCLVASPAERERGGSSKLVEAM 248
+G+T+ L G+L R + ++ +E G KV S T LV A+ SKL +A
Sbjct: 582 LSGLTVVLTGKLERLKRSEAKSKLESLGAKVTGSVSKKTDLVVVGAD----AGSKLQKAQ 637
Query: 249 ERGTRVVSEAWL 260
E G +V EAWL
Sbjct: 638 ELGIQVRDEAWL 649
>sp|Q97QT2|DNLJ_STRPN DNA ligase OS=Streptococcus pneumoniae serotype 4 (strain ATCC
BAA-334 / TIGR4) GN=ligA PE=3 SV=1
Length = 652
Score = 37.0 bits (84), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 190 FTGMTISLMGRLSRTHQY-WRTTIEKHGGKVAASPIGLTCLVASPAERERGGSSKLVEAM 248
+G+T+ L G+L R + ++ +E G KV S T LV A+ SKL +A
Sbjct: 582 LSGLTVVLTGKLERLKRSEAKSKLESLGAKVTGSISKKTDLVVVGAD----AGSKLQKAQ 637
Query: 249 ERGTRVVSEAWL 260
E G +V EAWL
Sbjct: 638 ELGIQVRDEAWL 649
>sp|C1CEA4|DNLJ_STRZJ DNA ligase OS=Streptococcus pneumoniae (strain JJA) GN=ligA PE=3
SV=1
Length = 652
Score = 37.0 bits (84), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 190 FTGMTISLMGRLSRTHQY-WRTTIEKHGGKVAASPIGLTCLVASPAERERGGSSKLVEAM 248
+G+T+ L G+L R + ++ +E G KV S T LV A+ SKL +A
Sbjct: 582 LSGLTVVLTGKLERLKRSEAKSKLESLGAKVTGSISKKTDLVVVGAD----AGSKLQKAQ 637
Query: 249 ERGTRVVSEAWL 260
E G +V EAWL
Sbjct: 638 ELGIQVRDEAWL 649
>sp|B8ZPV9|DNLJ_STRPJ DNA ligase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain
23F-1) GN=ligA PE=3 SV=1
Length = 652
Score = 37.0 bits (84), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 190 FTGMTISLMGRLSRTHQY-WRTTIEKHGGKVAASPIGLTCLVASPAERERGGSSKLVEAM 248
+G+T+ L G+L R + ++ +E G KV S T LV A+ SKL +A
Sbjct: 582 LSGLTVVLTGKLERLKRSEAKSKLESLGAKVTGSISKKTDLVVVGAD----AGSKLQKAQ 637
Query: 249 ERGTRVVSEAWL 260
E G +V EAWL
Sbjct: 638 ELGIQVRDEAWL 649
>sp|B2IPZ1|DNLJ_STRPS DNA ligase OS=Streptococcus pneumoniae (strain CGSP14) GN=ligA PE=3
SV=1
Length = 652
Score = 37.0 bits (84), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 190 FTGMTISLMGRLSRTHQY-WRTTIEKHGGKVAASPIGLTCLVASPAERERGGSSKLVEAM 248
+G+T+ L G+L R + ++ +E G KV S T LV A+ SKL +A
Sbjct: 582 LSGLTVVLTGKLERLKRSEAKSKLESLGAKVTGSISKKTDLVVVGAD----AGSKLQKAQ 637
Query: 249 ERGTRVVSEAWL 260
E G +V EAWL
Sbjct: 638 ELGIQVRDEAWL 649
>sp|B1M575|DNLJ_METRJ DNA ligase OS=Methylobacterium radiotolerans (strain ATCC 27329 /
DSM 1819 / JCM 2831) GN=ligA PE=3 SV=1
Length = 810
Score = 37.0 bits (84), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 185 AAVKPFTGMTISLMGRLSR-THQYWRTTIEKHGGKVAASPIGLTCLV-ASPAERERGGSS 242
AA F G T+ G L + T + E+ G KV+ S T LV A P G S
Sbjct: 731 AAASTFAGKTVVFTGALEKMTRNEAKAVAERLGAKVSGSVSAKTDLVVAGP-----GAGS 785
Query: 243 KLVEAMERGTRVVSE-AWL 260
KL +A + G RVVSE WL
Sbjct: 786 KLKDAQKHGVRVVSEDDWL 804
>sp|A5IY71|DNLJ_MYCAP DNA ligase OS=Mycoplasma agalactiae (strain PG2) GN=ligA PE=3 SV=1
Length = 654
Score = 36.6 bits (83), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 190 FTGMTISLMGRLSRTHQYWRTTIEKHGGKVAASPIGLTCLVASPAERERGGSSKLVEAME 249
+G T + G LS ++ IE+H G V+++ T + + ++ SKL +A +
Sbjct: 582 LSGYTFVITGVLSEPRSHFVKLIEEHSGNVSSAISSKTSYLLAGSD----AGSKLEKAYK 637
Query: 250 RGTRVVSEAWLIDSIEK 266
GT+V++E D I++
Sbjct: 638 TGTKVINEEQFYDLIKQ 654
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 323,091,531
Number of Sequences: 539616
Number of extensions: 14597610
Number of successful extensions: 30858
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 30673
Number of HSP's gapped (non-prelim): 118
length of query: 815
length of database: 191,569,459
effective HSP length: 126
effective length of query: 689
effective length of database: 123,577,843
effective search space: 85145133827
effective search space used: 85145133827
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 66 (30.0 bits)