BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>037231
MGSKEMSLVLLMMAVVVAAAATPSGIKSINVVGRIEDENEMSMPTEESRRHLNAGQDCIS
YDAMLANKVPCSLKGHSYYDCRNRTGSGPVNPYRRECSTSTNCERSTS

High Scoring Gene Products

Symbol, full name Information P value
RALFL4
ralf-like 4
protein from Arabidopsis thaliana 7.9e-14
RALFL19
ralf-like 19
protein from Arabidopsis thaliana 1.6e-13
RALFL31
ralf-like 31
protein from Arabidopsis thaliana 1.0e-11
RALFL22
ralf-like 22
protein from Arabidopsis thaliana 7.4e-11
RALFL24
ralf-like 24
protein from Arabidopsis thaliana 1.2e-10
RALFL33
ralf-like 33
protein from Arabidopsis thaliana 1.4e-09
RALF
Rapid alkalinization factor
protein from Nicotiana tabacum 1.8e-09
RALF23
rapid alkalinization factor 23
protein from Arabidopsis thaliana 1.8e-09
RALF1
rapid alkalinization factor 1
protein from Arabidopsis thaliana 8.7e-08
RALFL34
ralf-like 34
protein from Arabidopsis thaliana 3.8e-07

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  037231
        (108 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2032195 - symbol:RALFL4 "ralf-like 4" species:...   179  7.9e-14   1
TAIR|locus:504955964 - symbol:RALFL19 "ralf-like 19" spec...   176  1.6e-13   1
TAIR|locus:2129261 - symbol:RALFL31 "ralf-like 31" specie...   159  1.0e-11   1
TAIR|locus:2079787 - symbol:RALFL22 "ralf-like 22" specie...   151  7.4e-11   1
TAIR|locus:505006366 - symbol:RALFL24 "ralf-like 24" spec...   149  1.2e-10   1
TAIR|locus:2130724 - symbol:RALFL33 "ralf-like 33" specie...   139  1.4e-09   1
UNIPROTKB|Q945T0 - symbol:RALF "Rapid alkalinization fact...   138  1.8e-09   1
TAIR|locus:2089323 - symbol:RALF23 "rapid alkalinization ...   138  1.8e-09   1
TAIR|locus:2024730 - symbol:RALF1 "rapid alkalinization f...   122  8.7e-08   1
TAIR|locus:2155553 - symbol:RALFL34 "ralf-like 34" specie...   116  3.8e-07   1


>TAIR|locus:2032195 [details] [associations]
            symbol:RALFL4 "ralf-like 4" species:3702 "Arabidopsis
            thaliana" [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007267
            "cell-cell signaling" evidence=ISS] [GO:0048046 "apoplast"
            evidence=ISS] [GO:0009827 "plant-type cell wall modification"
            evidence=RCA] [GO:0009860 "pollen tube growth" evidence=RCA]
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0048046 GO:GO:0019722
            GO:GO:0005179 GO:GO:0007267 GO:GO:0004871 EMBL:AC021044
            InterPro:IPR008801 Pfam:PF05498 HOGENOM:HOG000237626
            ProtClustDB:CLSN2679386 EMBL:BT005747 EMBL:AK228573 IPI:IPI00519169
            PIR:H86408 RefSeq:NP_174148.1 UniGene:At.40920 STRING:Q9FZA0
            PRIDE:Q9FZA0 EnsemblPlants:AT1G28270.1 GeneID:839721
            KEGG:ath:AT1G28270 TAIR:At1g28270 eggNOG:NOG299234
            InParanoid:Q9FZA0 PhylomeDB:Q9FZA0 Genevestigator:Q9FZA0
            Uniprot:Q9FZA0
        Length = 110

 Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 39/84 (46%), Positives = 49/84 (58%)

Query:    22 TPSGIKSINVVGRIEDENEMSMPTEESRRHLNAGQDCISYDAMLANKVPCSLKGHSYYDC 81
             T S I     +G  +DE E  M +E +RR L  G+  I YDA+  N VPCS +G SYYDC
Sbjct:    28 TKSCINGQGCIGE-DDELESLMDSETNRRQLARGRRYIGYDALKKNNVPCSRRGRSYYDC 86

Query:    82 RNRTGSGPVNPYRRECSTSTNCER 105
             + R  +   NPYRR CS  T+C R
Sbjct:    87 KKRRRN---NPYRRGCSAITHCYR 107


>TAIR|locus:504955964 [details] [associations]
            symbol:RALFL19 "ralf-like 19" species:3702 "Arabidopsis
            thaliana" [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007267
            "cell-cell signaling" evidence=ISS] [GO:0048046 "apoplast"
            evidence=ISS] EMBL:CP002685 GO:GO:0048046 GO:GO:0019722
            GO:GO:0005179 GO:GO:0007267 GO:GO:0004871 EMBL:U78721
            InterPro:IPR008801 Pfam:PF05498 HOGENOM:HOG000237626 EMBL:BT011714
            EMBL:AK220918 IPI:IPI00545015 RefSeq:NP_850219.1 UniGene:At.48547
            PRIDE:Q6NME6 EnsemblPlants:AT2G33775.1 GeneID:817944
            KEGG:ath:AT2G33775 TAIR:At2g33775 eggNOG:NOG288947
            InParanoid:Q6NME6 OMA:ANATWTL PhylomeDB:Q6NME6
            ProtClustDB:CLSN2679386 Genevestigator:Q6NME6 Uniprot:Q6NME6
        Length = 110

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 38/82 (46%), Positives = 50/82 (60%)

Query:    29 INVVGRIEDENEMS--MPTEESRRHLNAGQDCISYDAMLANKVPCSLKGHSYYDCRNRTG 86
             +N  G I ++ E+   M +E +RR L A +  ISY A+  N VPCS +G SYYDC+ R  
Sbjct:    32 VNGQGCIGEDGELDYLMDSETNRRQLAARRSYISYGALRKNNVPCSRRGRSYYDCKKRKR 91

Query:    87 SGPVNPYRRECSTSTNCERSTS 108
             +   NPYRR CS  T+C R TS
Sbjct:    92 A---NPYRRGCSVITHCYRQTS 110


>TAIR|locus:2129261 [details] [associations]
            symbol:RALFL31 "ralf-like 31" species:3702 "Arabidopsis
            thaliana" [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007267
            "cell-cell signaling" evidence=ISS] [GO:0048046 "apoplast"
            evidence=ISS] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0048046
            GO:GO:0019722 GO:GO:0005179 GO:GO:0007267 EMBL:Z97335 GO:GO:0004871
            EMBL:AL161537 InterPro:IPR008801 Pfam:PF05498 HOGENOM:HOG000237626
            ProtClustDB:CLSN2688711 EMBL:BT024552 EMBL:AY085773 IPI:IPI00519686
            IPI:IPI00545425 PIR:D71400 RefSeq:NP_567413.1 UniGene:At.20340
            EnsemblPlants:AT4G13950.1 GeneID:827029 KEGG:ath:AT4G13950
            TAIR:At4g13950 eggNOG:NOG277228 InParanoid:Q2HIM9 OMA:TITRCAR
            PhylomeDB:Q2HIM9 Genevestigator:Q2HIM9 Uniprot:Q2HIM9
        Length = 113

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 38/88 (43%), Positives = 49/88 (55%)

Query:    22 TPSG-IKSINVVGRIEDENEMSMPTEESRRHLNAGQDCISYDAMLANKVPCSLKGHSYYD 80
             +P+G I ++ +   I  E+E  MPTE SRR L A +  I Y+ +  + VPC   G SYYD
Sbjct:    26 SPNGEIDAMLIRNSIIGEDEDLMPTEISRRVLMAQKRYIGYETLRRDMVPCQKPGASYYD 85

Query:    81 CRNRTGSGPVNPYRRECSTSTNCERSTS 108
             CR    SG  N Y R C T T C R T+
Sbjct:    86 CR----SGQANSYSRGCDTITRCARDTN 109


>TAIR|locus:2079787 [details] [associations]
            symbol:RALFL22 "ralf-like 22" species:3702 "Arabidopsis
            thaliana" [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007267
            "cell-cell signaling" evidence=ISS] [GO:0048046 "apoplast"
            evidence=ISS] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0006598
            "polyamine catabolic process" evidence=RCA] [GO:0009698
            "phenylpropanoid metabolic process" evidence=RCA] [GO:0042398
            "cellular modified amino acid biosynthetic process" evidence=RCA]
            [GO:0048767 "root hair elongation" evidence=RCA] GO:GO:0009506
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0048046 GO:GO:0019722
            GO:GO:0005179 GO:GO:0007267 GO:GO:0004871 EMBL:AC009606
            InterPro:IPR008801 Pfam:PF05498 HOGENOM:HOG000237626 EMBL:BT002767
            EMBL:BT024562 EMBL:AY088700 IPI:IPI00534711 RefSeq:NP_566253.1
            UniGene:At.43157 PRIDE:Q9MA62 EnsemblPlants:AT3G05490.1
            GeneID:819714 KEGG:ath:AT3G05490 TAIR:At3g05490 eggNOG:NOG296454
            InParanoid:Q9MA62 OMA:EEMEFDS PhylomeDB:Q9MA62
            ProtClustDB:CLSN2917098 Genevestigator:Q9MA62 Uniprot:Q9MA62
        Length = 119

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 35/71 (49%), Positives = 43/71 (60%)

Query:    35 IEDENEMSMPTEESRRHLNAGQDCISYDAMLANKVPCSLKGHSYYDCRNRTGSGPVNPYR 94
             I +E EM   ++ SRR L A +  ISY AM  N VPCS +G SYY+C+   G+   NPY 
Sbjct:    53 IAEEEEMEFDSDISRRIL-AQKKYISYGAMRRNSVPCSRRGASYYNCQR--GA-QANPYS 108

Query:    95 RECSTSTNCER 105
             R CST T C R
Sbjct:   109 RGCSTITRCRR 119


>TAIR|locus:505006366 [details] [associations]
            symbol:RALFL24 "ralf-like 24" species:3702 "Arabidopsis
            thaliana" [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007267
            "cell-cell signaling" evidence=ISS] [GO:0048046 "apoplast"
            evidence=ISS] EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0048046
            GO:GO:0019722 GO:GO:0005179 GO:GO:0007267 EMBL:AP000377
            GO:GO:0004871 InterPro:IPR008801 Pfam:PF05498 HOGENOM:HOG000237626
            EMBL:BX825164 IPI:IPI00533279 RefSeq:NP_566740.1 UniGene:At.37645
            PRIDE:Q9LK37 EnsemblPlants:AT3G23805.1 GeneID:821963
            KEGG:ath:AT3G23805 TAIR:At3g23805 eggNOG:NOG250947
            InParanoid:Q9LK37 OMA:SVITRCA PhylomeDB:Q9LK37
            ProtClustDB:CLSN2688711 Genevestigator:Q9LK37 Uniprot:Q9LK37
        Length = 118

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 34/78 (43%), Positives = 43/78 (55%)

Query:    31 VVGRIEDENEMSMPTEESRRHLNAGQDCISYDAMLANKVPCSLKGHSYYDCRNRTGSGPV 90
             V+G  E+E E  MP+E SRR +   +  ISY+ +  + VPC   G SYY CR    SG  
Sbjct:    43 VIG--EEEGEEMMPSEISRRVMMMRKQYISYETLRRDMVPCQKPGASYYACR----SGQA 96

Query:    91 NPYRRECSTSTNCERSTS 108
             N Y R CS  T C R T+
Sbjct:    97 NAYNRGCSVITRCARDTN 114


>TAIR|locus:2130724 [details] [associations]
            symbol:RALFL33 "ralf-like 33" species:3702 "Arabidopsis
            thaliana" [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007267
            "cell-cell signaling" evidence=ISS] [GO:0048046 "apoplast"
            evidence=ISS] [GO:0009505 "plant-type cell wall" evidence=IDA]
            [GO:0009506 "plasmodesma" evidence=IDA] GO:GO:0009506 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0048046 GO:GO:0019722 GO:GO:0005179
            GO:GO:0007267 GO:GO:0004871 GO:GO:0009505 EMBL:Z97339 EMBL:AL117321
            InterPro:IPR008801 Pfam:PF05498 HOGENOM:HOG000237626 EMBL:BT025592
            EMBL:AK226956 EMBL:AY088306 IPI:IPI00526605 RefSeq:NP_567476.1
            UniGene:At.19870 EnsemblPlants:AT4G15800.1 GeneID:827260
            KEGG:ath:AT4G15800 TAIR:At4g15800 eggNOG:NOG273542
            InParanoid:Q8L9P8 OMA:KCNGTIA PhylomeDB:Q8L9P8 ProtClustDB:PLN03222
            Genevestigator:Q8L9P8 Uniprot:Q8L9P8
        Length = 116

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 33/68 (48%), Positives = 39/68 (57%)

Query:    38 ENEMSMPTEESRRHLNAGQDCISYDAMLANKVPCSLKGHSYYDCRNRTGSGPVNPYRREC 97
             E E  M +E +RR L A    ISY A+  N VPCS +G SYY+CR   G+   NPY R C
Sbjct:    53 EEEFEMDSEINRRIL-ATTKYISYGALRRNTVPCSRRGASYYNCRR--GA-QANPYSRGC 108

Query:    98 STSTNCER 105
             S  T C R
Sbjct:   109 SAITRCRR 116


>UNIPROTKB|Q945T0 [details] [associations]
            symbol:RALF "Rapid alkalinization factor" species:4097
            "Nicotiana tabacum" [GO:0004871 "signal transducer activity"
            evidence=IDA] [GO:0005179 "hormone activity" evidence=IDA]
            [GO:0019722 "calcium-mediated signaling" evidence=IDA]
            GO:GO:0005576 GO:GO:0019722 GO:GO:0005179 GO:GO:0004871
            EMBL:AF407278 InterPro:IPR008801 Pfam:PF05498 Uniprot:Q945T0
        Length = 115

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 31/69 (44%), Positives = 41/69 (59%)

Query:    35 IEDENEMSMPTEESRRHLNAGQDCISYDAMLANKVPCSLKGHSYYDCRNRTGSGPVNPYR 94
             I +E E  + +E +RR L A +  ISY A+  N VPCS +G SYY+C+   G+   NPY 
Sbjct:    49 IAEEEEFELDSESNRRIL-ATKKYISYGALQKNSVPCSRRGASYYNCK--PGA-QANPYS 104

Query:    95 RECSTSTNC 103
             R CS  T C
Sbjct:   105 RGCSAITRC 113


>TAIR|locus:2089323 [details] [associations]
            symbol:RALF23 "rapid alkalinization factor 23"
            species:3702 "Arabidopsis thaliana" [GO:0005576 "extracellular
            region" evidence=ISM] [GO:0004871 "signal transducer activity"
            evidence=TAS] [GO:0007267 "cell-cell signaling" evidence=ISS]
            [GO:0048046 "apoplast" evidence=ISS] [GO:0009741 "response to
            brassinosteroid stimulus" evidence=IEP] [GO:0045926 "negative
            regulation of growth" evidence=IMP] [GO:0030003 "cellular cation
            homeostasis" evidence=RCA] [GO:0070838 "divalent metal ion
            transport" evidence=RCA] GO:GO:0009742 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0048046 GO:GO:0019722 GO:GO:0005179
            GO:GO:0007267 GO:GO:0004871 GO:GO:0045926 EMBL:AB022217
            GO:GO:0009741 InterPro:IPR008801 Pfam:PF05498 HOGENOM:HOG000237626
            EMBL:AY048301 EMBL:AY072630 EMBL:AY084588 IPI:IPI00517151
            RefSeq:NP_566555.1 UniGene:At.24650 STRING:Q9LUS7 PRIDE:Q9LUS7
            EnsemblPlants:AT3G16570.1 GeneID:820907 KEGG:ath:AT3G16570
            TAIR:At3g16570 eggNOG:NOG298130 InParanoid:Q9LUS7 OMA:PPFETEC
            PhylomeDB:Q9LUS7 ProtClustDB:PLN03221 Genevestigator:Q9LUS7
            Uniprot:Q9LUS7
        Length = 138

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 32/67 (47%), Positives = 40/67 (59%)

Query:    40 EMSMPTEESRRHLNAGQDCISYDAMLANKVPCSLKGHSYYDCRNRTGSGPVNPYRRECST 99
             E  M +E +RR L A +  ISY A+  N +PCS +G SYY+CR   G+   NPY R CS 
Sbjct:    76 EFEMDSEINRRIL-ATRRYISYGALRRNTIPCSRRGASYYNCRR--GA-QANPYSRGCSA 131

Query:   100 STNCERS 106
              T C RS
Sbjct:   132 ITRCRRS 138


>TAIR|locus:2024730 [details] [associations]
            symbol:RALF1 "rapid alkalinization factor 1" species:3702
            "Arabidopsis thaliana" [GO:0005576 "extracellular region"
            evidence=ISM] [GO:0004871 "signal transducer activity"
            evidence=TAS] [GO:0007267 "cell-cell signaling" evidence=ISS]
            [GO:0048046 "apoplast" evidence=ISS] [GO:0019722 "calcium-mediated
            signaling" evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0048046 GO:GO:0019722 GO:GO:0005179 GO:GO:0007267
            GO:GO:0004871 EMBL:AC009525 InterPro:IPR008801 Pfam:PF05498
            HOGENOM:HOG000237626 EMBL:BT010174 IPI:IPI00548392 PIR:D86159
            RefSeq:NP_171789.1 UniGene:At.42574 PRIDE:Q9SRY3
            EnsemblPlants:AT1G02900.1 GeneID:839389 KEGG:ath:AT1G02900
            TAIR:At1g02900 eggNOG:NOG265823 InParanoid:Q9SRY3 OMA:SIAECIG
            PhylomeDB:Q9SRY3 ProtClustDB:CLSN2912735 Genevestigator:Q9SRY3
            Uniprot:Q9SRY3
        Length = 120

 Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
 Identities = 29/64 (45%), Positives = 37/64 (57%)

Query:    40 EMSMPTEESRRHLNAGQDCISYDAMLANKVPCSLKGHSYYDCRNRTGSGPVNPYRRECST 99
             E  M +E +RR L A    ISY ++  N VPCS +G SYY+C+N  G+   NPY R CS 
Sbjct:    59 EEEMDSEINRRIL-ATTKYISYQSLKRNSVPCSRRGASYYNCQN--GA-QANPYSRGCSK 114

Query:   100 STNC 103
                C
Sbjct:   115 IARC 118


>TAIR|locus:2155553 [details] [associations]
            symbol:RALFL34 "ralf-like 34" species:3702 "Arabidopsis
            thaliana" [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007267
            "cell-cell signaling" evidence=ISS] [GO:0048046 "apoplast"
            evidence=ISS] [GO:0006949 "syncytium formation" evidence=RCA]
            EMBL:CP002688 GO:GO:0048046 GO:GO:0019722 GO:GO:0005179
            GO:GO:0007267 GO:GO:0004871 EMBL:AB020742 InterPro:IPR008801
            Pfam:PF05498 HOGENOM:HOG000237626 EMBL:AF370212 EMBL:AY133871
            EMBL:AY088253 IPI:IPI00524375 RefSeq:NP_201508.1 UniGene:At.9600
            STRING:Q9FHA6 PRIDE:Q9FHA6 EnsemblPlants:AT5G67070.1 GeneID:836842
            KEGG:ath:AT5G67070 TAIR:At5g67070 eggNOG:NOG243154
            InParanoid:Q9FHA6 OMA:CSSITRC PhylomeDB:Q9FHA6
            ProtClustDB:CLSN2716057 Genevestigator:Q9FHA6 Uniprot:Q9FHA6
        Length = 129

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 24/48 (50%), Positives = 29/48 (60%)

Query:    59 ISYDAMLANKVPCSLK-GHSYYDCRNRTGSGPVNPYRRECSTSTNCER 105
             ISY A+ AN+VPC  + G SYY        GPV+PY R CS+ T C R
Sbjct:    82 ISYGALSANRVPCPPRSGRSYYTHNCFRARGPVHPYSRGCSSITRCRR 129


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.311   0.126   0.372    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      108        94   0.00091  102 3  11 23  0.43    30
                                                     29  0.42    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  519 (55 KB)
  Total size of DFA:  113 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.07u 0.12s 10.19t   Elapsed:  00:00:00
  Total cpu time:  10.07u 0.12s 10.19t   Elapsed:  00:00:00
  Start:  Sat May 11 04:58:12 2013   End:  Sat May 11 04:58:12 2013

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