BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037231
(108 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FZA0|RLF4_ARATH Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1
Length = 110
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 61/110 (55%), Gaps = 8/110 (7%)
Query: 1 MGSKEMSLVLLMMAVVVAA---AATPSGIKSINVVGRI--EDENEMSMPTEESRRHLNAG 55
MG K + + L++ +VA A P IN G I +DE E M +E +RR L G
Sbjct: 1 MGVKMLLIFGLLILAMVAKSVNATYPLTKSCINGQGCIGEDDELESLMDSETNRRQLARG 60
Query: 56 QDCISYDAMLANKVPCSLKGHSYYDCRNRTGSGPVNPYRRECSTSTNCER 105
+ I YDA+ N VPCS +G SYYDC+ R + NPYRR CS T+C R
Sbjct: 61 RRYIGYDALKKNNVPCSRRGRSYYDCKKRRRN---NPYRRGCSAITHCYR 107
>sp|Q6NME6|RLF19_ARATH Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1
Length = 110
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 57/97 (58%), Gaps = 6/97 (6%)
Query: 15 VVVAAAATPSGIKS-INVVGRIEDENEMS--MPTEESRRHLNAGQDCISYDAMLANKVPC 71
V +A AT + KS +N G I ++ E+ M +E +RR L A + ISY A+ N VPC
Sbjct: 17 VAESANATWTLTKSCVNGQGCIGEDGELDYLMDSETNRRQLAARRSYISYGALRKNNVPC 76
Query: 72 SLKGHSYYDCRNRTGSGPVNPYRRECSTSTNCERSTS 108
S +G SYYDC+ R NPYRR CS T+C R TS
Sbjct: 77 SRRGRSYYDCKKRK---RANPYRRGCSVITHCYRQTS 110
>sp|Q2HIM9|RLF31_ARATH Protein RALF-like 31 OS=Arabidopsis thaliana GN=RALFL31 PE=3 SV=1
Length = 113
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 6 MSLVLLMMAVVVAAAATPSG-IKSINVVGRIEDENEMSMPTEESRRHLNAGQDCISYDAM 64
+++ L+++ +P+G I ++ + I E+E MPTE SRR L A + I Y+ +
Sbjct: 10 FAILFLLISADAFPIPSPNGEIDAMLIRNSIIGEDEDLMPTEISRRVLMAQKRYIGYETL 69
Query: 65 LANKVPCSLKGHSYYDCRNRTGSGPVNPYRRECSTSTNCERSTS 108
+ VPC G SYYDCR SG N Y R C T T C R T+
Sbjct: 70 RRDMVPCQKPGASYYDCR----SGQANSYSRGCDTITRCARDTN 109
>sp|Q8L9P8|RLF33_ARATH Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1
Length = 116
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 38 ENEMSMPTEESRRHLNAGQDCISYDAMLANKVPCSLKGHSYYDCRNRTGSGPVNPYRREC 97
E E M +E +RR L A ISY A+ N VPCS +G SYY+CR NPY R C
Sbjct: 53 EEEFEMDSEINRRIL-ATTKYISYGALRRNTVPCSRRGASYYNCRR---GAQANPYSRGC 108
Query: 98 STSTNCER 105
S T C R
Sbjct: 109 SAITRCRR 116
>sp|Q9MA62|RLF22_ARATH Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1
Length = 119
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 43 MPTEESRRHLNAGQDCISYDAMLANKVPCSLKGHSYYDCRNRTGSGPVNPYRRECSTSTN 102
++ SRR L A + ISY AM N VPCS +G SYY+C+ NPY R CST T
Sbjct: 61 FDSDISRRIL-AQKKYISYGAMRRNSVPCSRRGASYYNCQR---GAQANPYSRGCSTITR 116
Query: 103 CER 105
C R
Sbjct: 117 CRR 119
>sp|Q9LUS7|RLF23_ARATH Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23
PE=1 SV=1
Length = 138
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 47 ESRRHLNAGQDCISYDAMLANKVPCSLKGHSYYDCRNRTGSGPVNPYRRECSTSTNCERS 106
E R + A + ISY A+ N +PCS +G SYY+CR NPY R CS T C RS
Sbjct: 82 EINRRILATRRYISYGALRRNTIPCSRRGASYYNCRR---GAQANPYSRGCSAITRCRRS 138
>sp|Q9LK37|RLF24_ARATH Protein RALF-like 24 OS=Arabidopsis thaliana GN=RALFL24 PE=3 SV=1
Length = 118
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 44 PTEESRRHLNAGQDCISYDAMLANKVPCSLKGHSYYDCRNRTGSGPVNPYRRECSTSTNC 103
P+E SRR + + ISY+ + + VPC G SYY CR SG N Y R CS T C
Sbjct: 54 PSEISRRVMMMRKQYISYETLRRDMVPCQKPGASYYACR----SGQANAYNRGCSVITRC 109
Query: 104 ERST 107
R T
Sbjct: 110 ARDT 113
>sp|Q945T0|RALF_TOBAC Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1
Length = 115
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 46 EESRRHLNAGQDCISYDAMLANKVPCSLKGHSYYDCRNRTGSGPVNPYRRECSTSTNCE 104
ES R + A + ISY A+ N VPCS +G SYY+C+ NPY R CS T C
Sbjct: 59 SESNRRILATKKYISYGALQKNSVPCSRRGASYYNCKP---GAQANPYSRGCSAITRCR 114
>sp|Q9SRY3|RLF1_ARATH Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1
Length = 120
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 40 EMSMPTEESRRHLNAGQDCISYDAMLANKVPCSLKGHSYYDCRNRTGSGPVNPYRRECST 99
E M +E +RR L A ISY ++ N VPCS +G SYY+C+N NPY R CS
Sbjct: 59 EEEMDSEINRRIL-ATTKYISYQSLKRNSVPCSRRGASYYNCQN---GAQANPYSRGCSK 114
Query: 100 STNC 103
C
Sbjct: 115 IARC 118
>sp|Q9FHA6|RLF34_ARATH Protein RALF-like 34 OS=Arabidopsis thaliana GN=RALFL34 PE=2 SV=1
Length = 129
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 59 ISYDAMLANKVPCSLK-GHSYYDCRNRTGSGPVNPYRRECSTSTNCER 105
ISY A+ AN+VPC + G SYY GPV+PY R CS+ T C R
Sbjct: 82 ISYGALSANRVPCPPRSGRSYYTHNCFRARGPVHPYSRGCSSITRCRR 129
>sp|A8MQP2|RLF29_ARATH Protein RALF-like 29 OS=Arabidopsis thaliana GN=RALFL29 PE=3 SV=1
Length = 90
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Query: 81 CRNRTGSGPVNPYRRECSTSTNCERSTS 108
C RT P NPYRR C+T+ C RSTS
Sbjct: 50 CYKRT---PANPYRRPCTTANRCRRSTS 74
>sp|Q9SIU6|RLF14_ARATH Protein RALF-like 14 OS=Arabidopsis thaliana GN=RALFL14 PE=3 SV=1
Length = 101
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 20/109 (18%)
Query: 10 LLMMAVVVAAAATPSGIKSINVV----------GRIEDENEMSMPTEESRRHLNAGQDCI 59
LL+ AV+++ P + S + G ++ M + + S R + I
Sbjct: 3 LLIFAVIISVVLFPVLVSSRTIKCDQLSGKCINGEEKEIMNMRLGLDVSSRRILQASRYI 62
Query: 60 SYDAMLANKVPCSLKGHSYYDCRNRTGSGPVNPYRRECSTSTNCERSTS 108
SY+A+ N +P + +G D R+ NPYRR C ++C R T+
Sbjct: 63 SYEALKKN-LPDNRRGEP--DQRD-------NPYRRSCDVHSHCYRFTN 101
>sp|O49320|RLF18_ARATH Protein RALF-like 18 OS=Arabidopsis thaliana GN=RALFL18 PE=3 SV=1
Length = 103
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 9 VLLMMAVVVAAAATPSGIKSINVV--------GRIEDENEMSMPTEESRRHLNAGQDCIS 60
+L++ ++++AA P+ + V G E+ +MS + S R L A + I
Sbjct: 7 LLIIAVMIISAALLPALVVGSRPVKCDNCMDGGEKEEIMKMSSGVDVSHRILQAKR-FID 65
Query: 61 YDAMLANKVPCSLKGHSYYDCRNRTGSGPVNPYRRECSTSTNCERSTS 108
Y+A+ N +P G P N YRR CS +T C R T+
Sbjct: 66 YEALKKN-LPAKPDGKP---------DKPDNKYRRGCSAATGCYRFTN 103
>sp|Q8K157|GALM_MOUSE Aldose 1-epimerase OS=Mus musculus GN=Galm PE=2 SV=1
Length = 342
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 52 LNAGQDCISYDAMLANKVPCSLKGHSYYDCRNRTGSGPVNPYRRECSTSTN 102
L+ G+ I+Y A + P +L HSY+ N G G N Y E + + +
Sbjct: 152 LDGGELVINYRAQASQTTPVNLTNHSYF---NLAGQGSPNIYDHEVTIAAD 199
>sp|Q11PQ4|SYE_CYTH3 Glutamate--tRNA ligase OS=Cytophaga hutchinsonii (strain ATCC 33406
/ NCIMB 9469) GN=gltX PE=3 SV=1
Length = 517
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Query: 18 AAAATPSGIKSINVVGRIEDENEMSMPTEESRRHLNAGQDCI 59
A A+PS N+V R++ N +++P +E +R L+AG + +
Sbjct: 128 AKVASPS----YNMVTRMQMNNSLTLPEDEVKRRLDAGDEYV 165
>sp|Q5R8U1|GALM_PONAB Aldose 1-epimerase OS=Pongo abelii GN=GALM PE=2 SV=1
Length = 342
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 6/72 (8%)
Query: 34 RIEDENEMSMPTEES---RRHLNAGQDCISYDAMLANKVPCSLKGHSYYDCRNRTGSGPV 90
RI + E P E L+ G+ ++Y A + P +L HSY+ N G G
Sbjct: 131 RISPDGEEGYPGELKVWVTYTLDGGELVVNYRAQASQATPVNLTNHSYF---NLAGQGSP 187
Query: 91 NPYRRECSTSTN 102
N Y E + +
Sbjct: 188 NIYDHEVTIEAD 199
>sp|Q9GKX6|GALM_PIG Aldose 1-epimerase OS=Sus scrofa GN=GALM PE=2 SV=1
Length = 342
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 52 LNAGQDCISYDAMLANKVPCSLKGHSYYDCRNRTGSGPVNPYRRECSTSTN 102
L+ G+ ++Y A + P +L HSY+ N G G N Y E + +
Sbjct: 152 LDGGELVVNYRAQASQTTPVNLTNHSYF---NLAGQGSPNIYDHEVTIEAD 199
>sp|Q5EA79|GALM_BOVIN Aldose 1-epimerase OS=Bos taurus GN=GALM PE=2 SV=1
Length = 342
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 52 LNAGQDCISYDAMLANKVPCSLKGHSYYDCRNRTGSGPVNPYRRECSTSTN 102
L+ G+ ++Y A + P +L HSY+ N G G N Y E + +
Sbjct: 152 LDGGELVVNYRAQASQTTPVNLTNHSYF---NLAGQGSPNIYDHEVTIEAD 199
>sp|Q09572|SRD55_CAEEL Serpentine receptor class delta-55 OS=Caenorhabditis elegans
GN=srd-55 PE=3 SV=2
Length = 334
Score = 29.3 bits (64), Expect = 7.7, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 1 MGSKEMSLVLLMMAVVVAAAATPSGIKSINVVGRIEDENEMSMPTEESRRHLNAGQDCIS 60
+ S + +L L++ + A SG + V+ I D MS+ T+E + L G C +
Sbjct: 186 IASFQFTLATLLLVIGAYAIPAISGFLTSRVIHLINDNRGMSLKTKEQSKTLAYGLACQT 245
Query: 61 Y 61
+
Sbjct: 246 F 246
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.126 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,689,518
Number of Sequences: 539616
Number of extensions: 1308111
Number of successful extensions: 1999
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1975
Number of HSP's gapped (non-prelim): 23
length of query: 108
length of database: 191,569,459
effective HSP length: 76
effective length of query: 32
effective length of database: 150,558,643
effective search space: 4817876576
effective search space used: 4817876576
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)