BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037236
(953 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 1101 bits (2847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/925 (57%), Positives = 698/925 (75%), Gaps = 12/925 (1%)
Query: 30 HFLQEITTLCEESKSLNKALSLLQENLHNAD--------LKEATGVLLQACGHEKDIEIG 81
HFL+ I+ CE + L+K+ +QE + + + ++EA G+LLQA G KDIE+G
Sbjct: 45 HFLRRISNFCE-TGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMG 103
Query: 82 KRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 141
+++H+L+S ST+ ND ++ TR+ITMY++CG P DSR VFD+L+++NLFQWNA++S +++
Sbjct: 104 RKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSR 163
Query: 142 NELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVF 201
NELY +VL F+E++S T+L PD+FT+PCVIKAC G++DV G VHG+ K GL+ DVF
Sbjct: 164 NELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVF 223
Query: 202 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMM--G 259
V NAL++ YG FV + ++LF++MPERNLVSWNS+I S+NGFS ESF LL +MM
Sbjct: 224 VGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEEN 283
Query: 260 CEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFL 319
+ F+PDVAT+VTVLPVCA E + LG VHG AVKL L +EL++NNAL+DMY+KCG +
Sbjct: 284 GDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCI 343
Query: 320 SEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLT 379
+ AQ++F NNNKNVVSWNT++G FS GD GTFD+LR+M E++K +EVT+LN +
Sbjct: 344 TNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVP 403
Query: 380 SCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSS 439
C +S L SLKELH YSL+ F +ELVANAFV +YAKCGS A+ VFHG+ S+TV+S
Sbjct: 404 VCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNS 463
Query: 440 WNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVI 499
WNALI G+AQ+ D +LD LQM S L PD F++ SL+ AC+ LKSL GKE+HGF+I
Sbjct: 464 WNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFII 523
Query: 500 RNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIV 559
RN LE D F +S+LSLY+HC + + + LFD MEDKSLVSWNT+I GY QN P A+
Sbjct: 524 RNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALG 583
Query: 560 LFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYA 619
+FR+M G+Q C IS++ + ACS L +LRLG+E H YALK +L +DAF+ACS+IDMYA
Sbjct: 584 VFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYA 643
Query: 620 KCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVG 679
K G + QS +VF+ LK+K SWNA+I G+GIHG KEAI+LFE+M GH PD TF+G
Sbjct: 644 KNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLG 703
Query: 680 ILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLII-EMPE 738
+L ACNH+GL+ GL+Y QM+ +KP L+HYACV+DMLGRAG+LD A +++ EM E
Sbjct: 704 VLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSE 763
Query: 739 EADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDVRMM 798
EAD GIW SLL SCR + L+MGEKVA L ELEP+K ENYVL+SN+YAG KW+DVR +
Sbjct: 764 EADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKV 823
Query: 799 RQRMKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQISKIGYKPYT 858
RQRM E L+K+AGCSWIEL + SFVVG+ +EEI+ +W LE +ISK+GY+P T
Sbjct: 824 RQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDT 883
Query: 859 EAVLHELEEEEKVNILRGHSEKLAISFGLLKTTKDLTLRVCKNLRICVDCHNAAKLISKV 918
+V H+L EEEK+ LRGHSEKLA+++GL+KT++ T+RV KNLRICVDCHNAAKLISKV
Sbjct: 884 MSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKV 943
Query: 919 AEREIVIRDNKRFHHFRDGVCSCGD 943
EREIV+RDNKRFHHF++GVCSCGD
Sbjct: 944 MEREIVVRDNKRFHHFKNGVCSCGD 968
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 625 bits (1611), Expect = e-178, Method: Compositional matrix adjust.
Identities = 328/840 (39%), Positives = 514/840 (61%), Gaps = 30/840 (3%)
Query: 125 KTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFG 184
++R+ W L+ ++ L + + +V+++ +KPDN+ FP ++KA + D+ G
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIV-LGIKPDNYAFPALLKAVADLQDMELG 116
Query: 185 SGVHGMAAKMGL-IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSE 243
+H K G + V V+N L+ +Y KC + K+F+ + ERN VSWNS+I SS
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLI--SSL 174
Query: 244 NGFSCESFDLLIKMMGC--EEGFIPDVATVVTVLPVCAG----EGNVDLGILVHGLAVKL 297
F E +++ ++ C +E P T+V+V+ C+ EG + +G VH ++
Sbjct: 175 CSF--EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG-LMMGKQVHAYGLRK 231
Query: 298 GLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLL 357
G ++N LV MY K G L+ +++L +++V+WNT++ + + + L
Sbjct: 232 GELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYL 290
Query: 358 RKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHG-FDNDELVANAFVVAY 416
R+M + E ++P+E T+ +VL +CS L + KELH Y+L++G D + V +A V Y
Sbjct: 291 REMVL--EGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 348
Query: 417 AKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHS-DLEPDLFSI 475
C +S VF GM R + WNA+I GY+QN +AL F+ M S L + ++
Sbjct: 349 CNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTM 408
Query: 476 GSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMED 535
++ AC + R + IHGFV++ GL+ D F +L+ +Y K A +F +MED
Sbjct: 409 AGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMED 468
Query: 536 KSLVSWNTMIAGYSQNKLPVEAIVLFRRMFS-----------IGVQPCEISIVSILSACS 584
+ LV+WNTMI GY ++ +A++L +M + + ++P I++++IL +C+
Sbjct: 469 RDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCA 528
Query: 585 QLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNA 644
LSAL GKE H YA+K L D V +++DMYAKCGCL+ SR+VFD++ K+V +WN
Sbjct: 529 ALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNV 588
Query: 645 IIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLH 704
II +G+HG G+EAI+L M+ G KP+ TF+ + AC+H+G+V+ GL+ F M+ +
Sbjct: 589 IIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDY 648
Query: 705 AVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEAD-AGIWSSLLRSCRTYGALKMGEK 763
V+P +HYACVVD+LGRAG++ +A++L+ MP + + AG WSSLL + R + L++GE
Sbjct: 649 GVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEI 708
Query: 764 VAKTLLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGCSWIELGGNIH 823
A+ L++LEP+ A +YVL++NIY+ + WD +R+ MKE+G++KE GCSWIE G +H
Sbjct: 709 AAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVH 768
Query: 824 SFVVGDNMHPEWEEIRGMWGRLEEQISKIGYKPYTEAVLHELEEEEKVNILRGHSEKLAI 883
FV GD+ HP+ E++ G L E++ K GY P T VLH +EE+EK +L GHSEKLAI
Sbjct: 769 KFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAI 828
Query: 884 SFGLLKTTKDLTLRVCKNLRICVDCHNAAKLISKVAEREIVIRDNKRFHHFRDGVCSCGD 943
+FG+L T+ +RV KNLR+C DCH A K ISK+ +REI++RD +RFH F++G CSCGD
Sbjct: 829 AFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGD 888
Score = 244 bits (624), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 163/609 (26%), Positives = 291/609 (47%), Gaps = 27/609 (4%)
Query: 64 ATGVLLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 123
A LL+A +D+E+GK++H + + + L+ +Y CG +VFD
Sbjct: 99 AFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR 158
Query: 124 LKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIA---D 180
+ RN WN+L+S E + L F +L D ++P +FT V+ AC +
Sbjct: 159 ISERNQVSWNSLISSLCSFEKWEMALEAFRCML-DENVEPSSFTLVSVVTACSNLPMPEG 217
Query: 181 VSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 240
+ G VH + G + + F+ N L+AMYGK + L R+LV+WN+++
Sbjct: 218 LMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSS 276
Query: 241 SSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLG-L 299
+N E+ + L +M+ EG PD T+ +VLP C+ + G +H A+K G L
Sbjct: 277 LCQNEQLLEALEYLREMV--LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSL 334
Query: 300 TRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRK 359
V +ALVDMY C + + +FD ++ + WN +I +S L
Sbjct: 335 DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIG 394
Query: 360 MQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKC 419
M+ + + N T+ V+ +C + +HG+ ++ G D D V N + Y++
Sbjct: 395 ME-ESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 453
Query: 420 GSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQM-----------THSDL 468
G A +F M+ R + +WN +I GY + H AL +M + L
Sbjct: 454 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 513
Query: 469 EPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARV 528
+P+ ++ +++ +C L +L +GKEIH + I+N L D G +L+ +Y C +R
Sbjct: 514 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 573
Query: 529 LFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSA 588
+FD++ K++++WN +I Y + EAI L R M GV+P E++ +S+ +ACS
Sbjct: 574 VFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGM 633
Query: 589 LRLGKETHCYALK---AILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKD--KDVTSWN 643
+ G Y +K + + AC ++D+ + G ++++ ++ + + +W+
Sbjct: 634 VDEGLRIF-YVMKPDYGVEPSSDHYAC-VVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWS 691
Query: 644 AIIGGHGIH 652
+++G IH
Sbjct: 692 SLLGASRIH 700
Score = 211 bits (538), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 145/478 (30%), Positives = 237/478 (49%), Gaps = 26/478 (5%)
Query: 35 ITTLCEESK---SLNKALSLLQENLHNADLKEATGVLLQACGH---EKDIEIGKRVHELI 88
I++LC K +L +L EN+ + + ++ AC + + + +GK+VH
Sbjct: 171 ISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVS--VVTACSNLPMPEGLMMGKQVHAYG 228
Query: 89 SASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDV 148
+ N FIINT L+ MY G S+ + S R+L WN ++S +NE +
Sbjct: 229 LRKGEL-NSFIINT-LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEA 286
Query: 149 LSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMG-LIGDVFVSNALI 207
L E++ + ++PD FT V+ AC + + G +H A K G L + FV +AL+
Sbjct: 287 LEYLREMVLEG-VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALV 345
Query: 208 AMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEE--GFI 265
MY C V ++F+ M +R + WN++I G S+N E+ L I G EE G +
Sbjct: 346 DMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI---GMEESAGLL 402
Query: 266 PDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQIL 325
+ T+ V+P C G +HG VK GL R+ V N L+DMY++ G + A +
Sbjct: 403 ANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRI 462
Query: 326 FDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEE---------MKPNEVTVLN 376
F K ++++V+WNT+I + + LL KMQ E + +KPN +T++
Sbjct: 463 FGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMT 522
Query: 377 VLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRT 436
+L SC+ S L KE+H Y++++ D V +A V YAKCG + VF + +
Sbjct: 523 ILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKN 582
Query: 437 VSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEI 494
V +WN +I Y +G+ +A+D M ++P+ + S+ AC+H + G I
Sbjct: 583 VITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRI 640
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 582 bits (1500), Expect = e-165, Method: Compositional matrix adjust.
Identities = 325/904 (35%), Positives = 515/904 (56%), Gaps = 14/904 (1%)
Query: 45 LNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELISAS-TQFSNDFIINTR 103
L +A L + +N+ + EA +L+ CG + + G+++H I + F DF+ +
Sbjct: 64 LTEAFQRLDVSENNSPV-EAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAG-K 121
Query: 104 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKP 163
L+ MY CG D+ +VFD + R F WN ++ + N L+++ + E P
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNM--RVEGVP 179
Query: 164 DNFT-FPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 222
+ FP ++KAC + D+ GS +H + K+G F+ NAL++MY K + +L
Sbjct: 180 LGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRL 239
Query: 223 FEVMPER-NLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGE 281
F+ E+ + V WNSI+ S +G S E+ +L +M G P+ T+V+ L C G
Sbjct: 240 FDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMH--MTGPAPNSYTIVSALTACDGF 297
Query: 282 GNVDLGILVHGLAVKLGL-TRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTI 340
LG +H +K + EL V NAL+ MY +CG + +A+ + + NN +VV+WN++
Sbjct: 298 SYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSL 357
Query: 341 IGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRH 400
I + + M K +EV++ +++ + S LL+ ELH Y ++H
Sbjct: 358 IKGYVQNLMYKEALEFFSDMIAAGH--KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKH 415
Query: 401 GFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYF 460
G+D++ V N + Y+KC F M + + SW +I GYAQN H++AL+ F
Sbjct: 416 GWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF 475
Query: 461 LQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHC 520
+ +E D +GS++ A + LKS+ KEIH ++R GL D+ L+ +Y C
Sbjct: 476 RDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKC 534
Query: 521 EKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSIL 580
A +F+ ++ K +VSW +MI+ + N EA+ LFRRM G+ ++++ IL
Sbjct: 535 RNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCIL 594
Query: 581 SACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVT 640
SA + LSAL G+E HCY L+ + +A +++DMYA CG L+ ++ VFDR++ K +
Sbjct: 595 SAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLL 654
Query: 641 SWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQM 700
+ ++I +G+HG GK A+ELF+KM PD +F+ +L AC+HAGL++ G + M
Sbjct: 655 QYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIM 714
Query: 701 QKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYGALKM 760
+ + ++P EHY C+VDMLGRA + +AF+ + M E A +W +LL +CR++ ++
Sbjct: 715 EHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEI 774
Query: 761 GEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGCSWIELGG 820
GE A+ LLELEP N VLVSN++A +W+DV +R +MK G++K GCSWIE+ G
Sbjct: 775 GEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDG 834
Query: 821 NIHSFVVGDNMHPEWEEIRGMWGRLEEQISK-IGYKPYTEAVLHELEEEEKVNILRGHSE 879
+H F D HPE +EI + ++ + +GY T+ VLH ++E EKV +L GHSE
Sbjct: 835 KVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSE 894
Query: 880 KLAISFGLLKTTKDLTLRVCKNLRICVDCHNAAKLISKVAEREIVIRDNKRFHHFRDGVC 939
++AI++GLL+T LR+ KNLR+C DCH KL+SK+ R+IV+RD RFHHF G+C
Sbjct: 895 RIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLC 954
Query: 940 SCGD 943
SCGD
Sbjct: 955 SCGD 958
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 574 bits (1480), Expect = e-163, Method: Compositional matrix adjust.
Identities = 326/874 (37%), Positives = 502/874 (57%), Gaps = 29/874 (3%)
Query: 82 KRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL-KTRNLFQWNALVSGFT 140
+R+H L+ + S+DF + +LI YS P S VF + +N++ WN+++ F+
Sbjct: 24 RRIHALVISLGLDSSDFF-SGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFS 82
Query: 141 KNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDV 200
KN L+P+ L + +L ++++ PD +TFP VIKAC G+ D G V+ MG D+
Sbjct: 83 KNGLFPEALEFYGKL-RESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDL 141
Query: 201 FVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGC 260
FV NAL+ MY + + ++F+ MP R+LVSWNS+I G S +G+ E+ ++ ++
Sbjct: 142 FVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKN- 200
Query: 261 EEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLS 320
+PD TV +VLP V G +HG A+K G+ ++VNN LV MY K +
Sbjct: 201 -SWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPT 259
Query: 321 EAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEE----------EMKPN 370
+A+ +FD+ + ++ VS+NT+I CG K++M EE + KP+
Sbjct: 260 DARRVFDEMDVRDSVSYNTMI---------CGYL----KLEMVEESVRMFLENLDQFKPD 306
Query: 371 EVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFH 430
+TV +VL +C +L K ++ Y L+ GF + V N + YAKCG I+A +VF+
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 431 GMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHR 490
M+ + SWN++I GY Q+GD ++A+ F M + + D + LI T L L
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 491 GKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQ 550
GK +H I++G+ D +L+ +Y C + + +F M V+WNT+I+ +
Sbjct: 427 GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVR 486
Query: 551 NKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFV 610
+ + +M V P + + L C+ L+A RLGKE HC L+ ++ +
Sbjct: 487 FGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQI 546
Query: 611 ACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGH 670
++I+MY+KCGCLE S RVF+R+ +DV +W +I +G++G G++A+E F M G
Sbjct: 547 GNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGI 606
Query: 671 KPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAF 730
PD+ F+ I+ AC+H+GLV+ GL F +M+ + + P +EHYACVVD+L R+ K+ A
Sbjct: 607 VPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAE 666
Query: 731 KLIIEMPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSE 790
+ I MP + DA IW+S+LR+CRT G ++ E+V++ ++EL PD +L SN YA
Sbjct: 667 EFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALR 726
Query: 791 KWDDVRMMRQRMKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQIS 850
KWD V ++R+ +K++ + K G SWIE+G N+H F GD+ P+ E I L ++
Sbjct: 727 KWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMA 786
Query: 851 KIGYKPYTEAVLHEL-EEEEKVNILRGHSEKLAISFGLLKTTKDLTLRVCKNLRICVDCH 909
K GY P V L EEEEK ++ GHSE+LAI+FGLL T L+V KNLR+C DCH
Sbjct: 787 KEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCH 846
Query: 910 NAAKLISKVAEREIVIRDNKRFHHFRDGVCSCGD 943
KLISK+ REI++RD RFH F+DG CSC D
Sbjct: 847 EVTKLISKIVGREILVRDANRFHLFKDGTCSCKD 880
Score = 247 bits (630), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 178/627 (28%), Positives = 315/627 (50%), Gaps = 19/627 (3%)
Query: 169 PCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF-EVMP 227
P + +A ++++ +H + +GL F S LI Y + +F V P
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 228 ERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLG 287
+N+ WNSII S+NG E+ + K+ E PD T +V+ CAG + ++G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLR--ESKVSPDKYTFPSVIKACAGLFDAEMG 125
Query: 288 ILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMA 347
LV+ + +G +L V NALVDMY++ G L+ A+ +FD+ +++VSWN++I +S
Sbjct: 126 DLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH 185
Query: 348 GDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKE---LHGYSLRHGFDN 404
G ++ ++K + P+ TV +VL + LL +K+ LHG++L+ G ++
Sbjct: 186 GYYEEALEIYH--ELKNSWIVPDSFTVSSVLPAF---GNLLVVKQGQGLHGFALKSGVNS 240
Query: 405 DELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMT 464
+V N V Y K A VF MD R S+N +ICGY + +++ FL+
Sbjct: 241 VVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-N 299
Query: 465 HSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSS 524
+PDL ++ S++ AC HL+ L K I+ ++++ G +S L+ +Y C
Sbjct: 300 LDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMI 359
Query: 525 SARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACS 584
+AR +F+ ME K VSWN++I+GY Q+ +EA+ LF+ M + Q I+ + ++S +
Sbjct: 360 TARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVST 419
Query: 585 QLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNA 644
+L+ L+ GK H +K+ + D V+ ++IDMYAKCG + S ++F + D +WN
Sbjct: 420 RLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNT 479
Query: 645 IIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLH 704
+I G +++ +M PD TF+ L C G + + +
Sbjct: 480 VISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRF- 538
Query: 705 AVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYGALKMGEKV 764
+ +L+ +++M + G L+++ + + E D W+ ++ + YG GEK
Sbjct: 539 GYESELQIGNALIEMYSKCGCLENSSR-VFERMSRRDVVTWTGMIYA---YGMYGEGEKA 594
Query: 765 AKTLLELEPDK--AENYVLVSNIYAGS 789
+T ++E ++ V ++ IYA S
Sbjct: 595 LETFADMEKSGIVPDSVVFIAIIYACS 621
Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 184/340 (54%), Gaps = 9/340 (2%)
Query: 45 LNKALSLLQENLHN--ADLKEATGVLLQACGHEKDIEIGKRVHELISASTQFSNDFIINT 102
+ +++ + ENL DL + VL +ACGH +D+ + K ++ + F + +
Sbjct: 289 VEESVRMFLENLDQFKPDLLTVSSVL-RACGHLRDLSLAKYIYNYM-LKAGFVLESTVRN 346
Query: 103 RLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELK 162
LI +Y+ CG + +R VF+S++ ++ WN+++SG+ ++ + + +F +++ E +
Sbjct: 347 ILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLF-KMMMIMEEQ 405
Query: 163 PDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 222
D+ T+ +I +AD+ FG G+H K G+ D+ VSNALI MY KC V + +K+
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKI 465
Query: 223 FEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEG 282
F M + V+WN++I G + +M E +PD+AT + LP+CA
Sbjct: 466 FSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSE--VVPDMATFLVTLPMCASLA 523
Query: 283 NVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIG 342
LG +H ++ G EL + NAL++MY+KCG L + +F++ + ++VV+W +I
Sbjct: 524 AKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIY 583
Query: 343 AFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCS 382
A+ M G+ G L M++ + P+ V + ++ +CS
Sbjct: 584 AYGMYGE--GEKALETFADMEKSGIVPDSVVFIAIIYACS 621
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 568 bits (1463), Expect = e-160, Method: Compositional matrix adjust.
Identities = 307/877 (35%), Positives = 494/877 (56%), Gaps = 7/877 (0%)
Query: 68 LLQAC-GHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 126
+L+AC G ++ +++H I + + N LI +YS GF +RRVFD L+
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNP-LIDLYSRNGFVDLARRVFDGLRL 250
Query: 127 RNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSG 186
++ W A++SG +KNE + + +F ++ + P + F V+ AC I + G
Sbjct: 251 KDHSSWVAMISGLSKNECEAEAIRLFCDMYV-LGIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 187 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGF 246
+HG+ K+G D +V NAL+++Y + +F M +R+ V++N++I G S+ G+
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 369
Query: 247 SCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVN 306
++ +L +M +G PD T+ +++ C+ +G + G +H KLG +
Sbjct: 370 GEKAMELFKRMH--LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE 427
Query: 307 NALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEE 366
AL+++YAKC + A F + +NVV WN ++ A+ + D+ +F + R+MQ+ EE
Sbjct: 428 GALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQI--EE 485
Query: 367 MKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAE 426
+ PN+ T ++L +C +L +++H ++ F + V + + YAK G +A
Sbjct: 486 IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAW 545
Query: 427 NVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLK 486
++ + V SW +I GY Q KAL F QM + D + + + AC L+
Sbjct: 546 DILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQ 605
Query: 487 SLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIA 546
+L G++IH +G D +L++LY C K + + F++ E ++WN +++
Sbjct: 606 ALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVS 665
Query: 547 GYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTN 606
G+ Q+ EA+ +F RM G+ + S + A S+ + ++ GK+ H K +
Sbjct: 666 GFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDS 725
Query: 607 DAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKML 666
+ V ++I MYAKCG + + + F + K+ SWNAII + HG+G EA++ F++M+
Sbjct: 726 ETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMI 785
Query: 667 ALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKL 726
+P+ T VG+L AC+H GLV+ G+ YF M + + PK EHY CVVDML RAG L
Sbjct: 786 HSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLL 845
Query: 727 DDAFKLIIEMPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIY 786
A + I EMP + DA +W +LL +C + +++GE A LLELEP+ + YVL+SN+Y
Sbjct: 846 SRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY 905
Query: 787 AGSEKWDDVRMMRQRMKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEIRGMWGRLE 846
A S+KWD + RQ+MKE+G++KE G SWIE+ +IHSF VGD HP +EI + L
Sbjct: 906 AVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLT 965
Query: 847 EQISKIGYKPYTEAVLHELEEEEKVNILRGHSEKLAISFGLLKTTKDLTLRVCKNLRICV 906
++ S+IGY ++L+EL+ E+K I+ HSEKLAISFGLL + + V KNLR+C
Sbjct: 966 KRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCN 1025
Query: 907 DCHNAAKLISKVAEREIVIRDNKRFHHFRDGVCSCGD 943
DCH K +SKV+ REI++RD RFHHF G CSC D
Sbjct: 1026 DCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKD 1062
Score = 283 bits (723), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 182/697 (26%), Positives = 343/697 (49%), Gaps = 22/697 (3%)
Query: 68 LLQAC-GHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 126
LL+ C ++ G+++H I SN ++ +L Y G + +VFD +
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNG-CLSEKLFDFYLFKGDLYGAFKVFDEMPE 148
Query: 127 RNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKAC-GGIADVSFGS 185
R +F WN ++ L +V +FV ++S+ + P+ TF V++AC GG
Sbjct: 149 RTIFTWNKMIKELASRNLIGEVFGLFVRMVSEN-VTPNEGTFSGVLEACRGGSVAFDVVE 207
Query: 186 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENG 245
+H GL V N LI +Y + FV+ ++F+ + ++ SW ++I G S+N
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 267
Query: 246 FSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMV 305
E+ L M G +P +VL C ++++G +HGL +KLG + + V
Sbjct: 268 CEAEAIRLFCDMYVL--GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 325
Query: 306 NNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEE 365
NALV +Y G L A+ +F + ++ V++NT+I S G +L ++M + +
Sbjct: 326 CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHL--D 383
Query: 366 EMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISA 425
++P+ T+ +++ +CS L ++LH Y+ + GF ++ + A + YAKC +A
Sbjct: 384 GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA 443
Query: 426 ENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHL 485
+ F + V WN ++ Y D + F QM ++ P+ ++ S++ C L
Sbjct: 444 LDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL 503
Query: 486 KSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMI 545
L G++IH +I+ + +++ L+ +Y K +A + K +VSW TMI
Sbjct: 504 GDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMI 563
Query: 546 AGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILT 605
AGY+Q +A+ FR+M G++ E+ + + +SAC+ L AL+ G++ H A + +
Sbjct: 564 AGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFS 623
Query: 606 NDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKM 665
+D +++ +Y++CG +E+S F++ + D +WNA++ G G +EA+ +F +M
Sbjct: 624 SDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRM 683
Query: 666 LALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKL----EHYAC--VVDM 719
G + FTF + A + ++ G +++HAV K E C ++ M
Sbjct: 684 NREGIDNNNFTFGSAVKAASETANMKQG-------KQVHAVITKTGYDSETEVCNALISM 736
Query: 720 LGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYG 756
+ G + DA K +E+ + + W++++ + +G
Sbjct: 737 YAKCGSISDAEKQFLEVSTKNEVS-WNAIINAYSKHG 772
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 210/460 (45%), Gaps = 49/460 (10%)
Query: 353 TFDLLRKMQMKEEEMKPNEVTVLNVLTSC-SEKSELLSLKELHGYSLRHGFDNDELVANA 411
+F R ++ ++PN T+ +L C L ++LH L+ G D++ ++
Sbjct: 66 SFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEK 125
Query: 412 FVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPD 471
Y G A VF M RT+ +WN +I A + F++M ++ P+
Sbjct: 126 LFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPN 185
Query: 472 LFSIGSLILACTHLK-SLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLF 530
+ ++ AC + ++IH ++ GL + L+ LY AR +F
Sbjct: 186 EGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVF 245
Query: 531 DEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALR 590
D + K SW MI+G S+N+ EAI LF M+ +G+ P + S+LSAC ++ +L
Sbjct: 246 DGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLE 305
Query: 591 LGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHG 650
+G++ H LK ++D +V +++ +Y G L + +F + +D ++N +I G
Sbjct: 306 IGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLS 365
Query: 651 IHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPK- 709
GYG++A+ELF++M G +PD+ T +++AC+ G + G Q+LHA K
Sbjct: 366 QCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG-------QQLHAYTTKL 418
Query: 710 ------------LEHYACVVD---------------------MLGRAGKLDD---AFKLI 733
L YA D ML G LDD +F++
Sbjct: 419 GFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIF 478
Query: 734 IEMPEE---ADAGIWSSLLRSCRTYGALKMGEKVAKTLLE 770
+M E + + S+L++C G L++GE++ +++
Sbjct: 479 RQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 518
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 147/320 (45%), Gaps = 24/320 (7%)
Query: 468 LEPDLFSIGSLILACTHLK-SLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSA 526
+ P+ ++ L+ C SL G+++H +++ GL+ + L Y+ A
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 527 RVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQL 586
+FDEM ++++ +WN MI + L E LF RM S V P E + +L AC
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 199
Query: 587 S-ALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAI 645
S A + ++ H L L + V +ID+Y++ G ++ +RRVFD L+ KD +SW A+
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 259
Query: 646 IGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHA 705
I G + EAI LF M LG P + F +L AC +E G ++LH
Sbjct: 260 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG-------EQLHG 312
Query: 706 VKPKL----EHYAC--VVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYGALK 759
+ KL + Y C +V + G L A + M + DA +++L+ G
Sbjct: 313 LVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR-DAVTYNTLINGLSQCG--- 368
Query: 760 MGEKVAKTLLE-----LEPD 774
GEK + LEPD
Sbjct: 369 YGEKAMELFKRMHLDGLEPD 388
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 549 bits (1414), Expect = e-155, Method: Compositional matrix adjust.
Identities = 290/808 (35%), Positives = 476/808 (58%), Gaps = 11/808 (1%)
Query: 139 FTKNELYPDVLSIFVELLSDTELKPDN-FTFPC--VIKACGGIADVSFGSGVHGMAAKMG 195
F+ P+ S LS+ P N + P +++ C + ++ + + K G
Sbjct: 8 FSTVPQIPNPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKELR---QILPLVFKNG 64
Query: 196 LIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLI 255
L + F L++++ + V+E ++FE + + V +++++ G ++ ++ +
Sbjct: 65 LYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFV 124
Query: 256 KMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAK 315
+M + P V +L VC E + +G +HGL VK G + +L L +MYAK
Sbjct: 125 RMR--YDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAK 182
Query: 316 CGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVL 375
C ++EA+ +FD+ +++VSWNTI+ +S G ++++ M EE +KP+ +T++
Sbjct: 183 CRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMC--EENLKPSFITIV 240
Query: 376 NVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSR 435
+VL + S + KE+HGY++R GFD+ ++ A V YAKCGS +A +F GM R
Sbjct: 241 SVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLER 300
Query: 436 TVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIH 495
V SWN++I Y QN + +A+ F +M ++P S+ + AC L L RG+ IH
Sbjct: 301 NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH 360
Query: 496 GFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPV 555
+ GL+ + SL+S+Y C++ +A +F +++ ++LVSWN MI G++QN P+
Sbjct: 361 KLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPI 420
Query: 556 EAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSII 615
+A+ F +M S V+P + VS+++A ++LS K H +++ L + FV +++
Sbjct: 421 DALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALV 480
Query: 616 DMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTF 675
DMYAKCG + +R +FD + ++ VT+WNA+I G+G HG+GK A+ELFE+M KP+
Sbjct: 481 DMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGV 540
Query: 676 TFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIE 735
TF+ ++ AC+H+GLVE GLK F M++ ++++ ++HY +VD+LGRAG+L++A+ I++
Sbjct: 541 TFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQ 600
Query: 736 MPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDV 795
MP + ++ ++L +C+ + + EK A+ L EL PD +VL++NIY + W+ V
Sbjct: 601 MPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKV 660
Query: 796 RMMRQRMKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQISKIGYK 855
+R M +GL+K GCS +E+ +HSF G HP+ ++I +L I + GY
Sbjct: 661 GQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYV 720
Query: 856 PYTEAVLHELEEEEKVNILRGHSEKLAISFGLLKTTKDLTLRVCKNLRICVDCHNAAKLI 915
P T VL +E + K +L HSEKLAISFGLL TT T+ V KNLR+C DCHNA K I
Sbjct: 721 PDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYI 779
Query: 916 SKVAEREIVIRDNKRFHHFRDGVCSCGD 943
S V REIV+RD +RFHHF++G CSCGD
Sbjct: 780 SLVTGREIVVRDMQRFHHFKNGACSCGD 807
Score = 318 bits (814), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 198/626 (31%), Positives = 338/626 (53%), Gaps = 28/626 (4%)
Query: 51 LLQENLHNADLKE-ATGVLLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYS 109
L + N A++ E +LL+ C K++ +++ L+ + + F T+L++++
Sbjct: 25 LSERNYIPANVYEHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFF-QTKLVSLFC 80
Query: 110 LCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFP 169
G ++ RVF+ + ++ ++ ++ GF K L FV + D +++P + F
Sbjct: 81 RYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD-DVEPVVYNFT 139
Query: 170 CVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPER 229
++K CG A++ G +HG+ K G D+F L MY KC V E K+F+ MPER
Sbjct: 140 YLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER 199
Query: 230 NLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGIL 289
+LVSWN+I+ G S+NG + + +++ M CEE P T+V+VLP + + +G
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVKSM--CEENLKPSFITIVSVLPAVSALRLISVGKE 257
Query: 290 VHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGD 349
+HG A++ G + ++ ALVDMYAKCG L A+ LFD +NVVSWN++I A+ +
Sbjct: 258 IHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNEN 317
Query: 350 VCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVA 409
+ +KM +E +KP +V+V+ L +C++ +L + +H S+ G D + V
Sbjct: 318 PKEAMLIFQKML--DEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVV 375
Query: 410 NAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLE 469
N+ + Y KC +A ++F + SRT+ SWNA+I G+AQNG + AL+YF QM ++
Sbjct: 376 NSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVK 435
Query: 470 PDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVL 529
PD F+ S+I A L H K IHG V+R+ L+ + F +L+ +Y C AR++
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLI 495
Query: 530 FDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQ---- 585
FD M ++ + +WN MI GY + A+ LF M ++P ++ +S++SACS
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555
Query: 586 ---LSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKD-VTS 641
L + KE Y+++ L+ D + A ++D+ + G L ++ ++ K V
Sbjct: 556 EAGLKCFYMMKEN--YSIE--LSMDHYGA--MVDLLGRAGRLNEAWDFIMQMPVKPAVNV 609
Query: 642 WNAIIGGHGIH---GYGKEAIE-LFE 663
+ A++G IH + ++A E LFE
Sbjct: 610 YGAMLGACQIHKNVNFAEKAAERLFE 635
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 535 bits (1379), Expect = e-151, Method: Compositional matrix adjust.
Identities = 263/656 (40%), Positives = 404/656 (61%), Gaps = 5/656 (0%)
Query: 290 VHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGD 349
+H + LGL + L+ + G ++ A+ +FD + WN II +S
Sbjct: 40 IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNH 99
Query: 350 VCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVA 409
+ MQ+ + P+ T ++L +CS S L + +H R GFD D V
Sbjct: 100 FQDALLMYSNMQLAR--VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 410 NAFVVAYAKCGSEISAENVFHGMD--SRTVSSWNALICGYAQNGDHLKALDYFLQMTHSD 467
N + YAKC SA VF G+ RT+ SW A++ YAQNG+ ++AL+ F QM D
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 468 LEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSAR 527
++PD ++ S++ A T L+ L +G+ IH V++ GLE + ISL ++Y C + ++A+
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 528 VLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLS 587
+LFD+M+ +L+ WN MI+GY++N EAI +F M + V+P ISI S +SAC+Q+
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 588 ALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIG 647
+L + + Y ++ +D F++ ++IDM+AKCG +E +R VFDR D+DV W+A+I
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 648 GHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVK 707
G+G+HG +EAI L+ M G P+ TF+G+LMACNH+G+V G +F++M H +
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKIN 456
Query: 708 PKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYGALKMGEKVAKT 767
P+ +HYACV+D+LGRAG LD A+++I MP + +W +LL +C+ + +++GE A+
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516
Query: 768 LLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGCSWIELGGNIHSFVV 827
L ++P +YV +SN+YA + WD V +R RMKE+GL K+ GCSW+E+ G + +F V
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRV 576
Query: 828 GDNMHPEWEEIRGMWGRLEEQISKIGYKPYTEAVLHELEEEEKVNILRGHSEKLAISFGL 887
GD HP +EEI +E ++ + G+ +A LH+L +EE L HSE++AI++GL
Sbjct: 577 GDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGL 636
Query: 888 LKTTKDLTLRVCKNLRICVDCHNAAKLISKVAEREIVIRDNKRFHHFRDGVCSCGD 943
+ T + LR+ KNLR CV+CH A KLISK+ +REIV+RD RFHHF+DGVCSCGD
Sbjct: 637 ISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGD 692
Score = 225 bits (573), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/420 (30%), Positives = 226/420 (53%), Gaps = 13/420 (3%)
Query: 68 LLQACGHEKDIEIGKRVH-ELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 126
L+ + H+ + K++H L+ QFS F+I T+LI S G +R+VFD L
Sbjct: 27 LIDSATHKAQL---KQIHARLLVLGLQFSG-FLI-TKLIHASSSFGDITFARQVFDDLPR 81
Query: 127 RNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSG 186
+F WNA++ G+++N + D L ++ + + PD+FTFP ++KAC G++ + G
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNM-QLARVSPDSFTFPHLLKACSGLSHLQMGRF 140
Query: 187 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE--VMPERNLVSWNSIICGSSEN 244
VH ++G DVFV N LIA+Y KC + +FE +PER +VSW +I+ ++N
Sbjct: 141 VHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQN 200
Query: 245 GFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELM 304
G E+ ++ +M + PD +V+VL ++ G +H VK+GL E
Sbjct: 201 GEPMEALEIFSQMRKMD--VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 305 VNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKE 364
+ +L MYAKCG ++ A+ILFDK + N++ WN +I ++ G D+ +M K
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK- 317
Query: 365 EEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEIS 424
+++P+ +++ + +++C++ L + ++ Y R + +D +++A + +AKCGS
Sbjct: 318 -DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEG 376
Query: 425 AENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTH 484
A VF R V W+A+I GY +G +A+ + M + P+ + L++AC H
Sbjct: 377 ARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNH 436
Score = 193 bits (491), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 201/376 (53%), Gaps = 7/376 (1%)
Query: 376 NVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSR 435
+++ S + K++L K++H L G + + A + G A VF +
Sbjct: 26 SLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRP 82
Query: 436 TVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIH 495
+ WNA+I GY++N AL + M + + PD F+ L+ AC+ L L G+ +H
Sbjct: 83 QIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVH 142
Query: 496 GFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFD--EMEDKSLVSWNTMIAGYSQNKL 553
V R G + D F L++LY C + SAR +F+ + ++++VSW +++ Y+QN
Sbjct: 143 AQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202
Query: 554 PVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACS 613
P+EA+ +F +M + V+P +++VS+L+A + L L+ G+ H +K L + + S
Sbjct: 203 PMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 262
Query: 614 IIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPD 673
+ MYAKCG + ++ +FD++K ++ WNA+I G+ +GY +EAI++F +M+ +PD
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
Query: 674 TFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLI 733
T + + AC G +E + + + + + + ++DM + G ++ A +L+
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGR-SDYRDDVFISSALIDMFAKCGSVEGA-RLV 380
Query: 734 IEMPEEADAGIWSSLL 749
+ + D +WS+++
Sbjct: 381 FDRTLDRDVVVWSAMI 396
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 534 bits (1375), Expect = e-150, Method: Compositional matrix adjust.
Identities = 292/835 (34%), Positives = 478/835 (57%), Gaps = 18/835 (2%)
Query: 116 DSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKAC 175
++ +FD R+ + +L+ GF+++ + +F+ + ++ D F V+K
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNI-HRLGMEMDCSIFSSVLKVS 103
Query: 176 GGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 235
+ D FG +H K G + DV V +L+ Y K + ++ K+F+ M ERN+V+W
Sbjct: 104 ATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWT 163
Query: 236 SIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAV 295
++I G + N + E L ++M EG P+ T L V A EG G+ VH + V
Sbjct: 164 TLISGYARNSMNDEVLTLFMRMQN--EGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 221
Query: 296 KLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAG---DVCG 352
K GL + + V+N+L+++Y KCG + +A+ILFDK K+VV+WN++I ++ G + G
Sbjct: 222 KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 281
Query: 353 TFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAF 412
F M+ ++ +E + +V+ C+ EL ++LH +++GF D+ + A
Sbjct: 282 MF-----YSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTAL 336
Query: 413 VVAYAKCGSEISAENVFHGMDS-RTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPD 471
+VAY+KC + + A +F + V SW A+I G+ QN +A+D F +M + P+
Sbjct: 337 MVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPN 396
Query: 472 LFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFD 531
F+ ++ A + E+H V++ E S G +LL Y+ K A +F
Sbjct: 397 EFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS 452
Query: 532 EMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSA-LR 590
++DK +V+W+ M+AGY+Q AI +F + G++P E + SIL+ C+ +A +
Sbjct: 453 GIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMG 512
Query: 591 LGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHG 650
GK+ H +A+K+ L + V+ +++ MYAK G +E + VF R ++KD+ SWN++I G+
Sbjct: 513 QGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYA 572
Query: 651 IHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKL 710
HG +A+++F++M K D TF+G+ AC HAGLVE G KYF M + + P
Sbjct: 573 QHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTK 632
Query: 711 EHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLE 770
EH +C+VD+ RAG+L+ A K+I MP A + IW ++L +CR + ++G A+ ++
Sbjct: 633 EHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIA 692
Query: 771 LEPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGCSWIELGGNIHSFVVGDN 830
++P+ + YVL+SN+YA S W + +R+ M ER ++KE G SWIE+ +SF+ GD
Sbjct: 693 MKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDR 752
Query: 831 MHPEWEEIRGMWGRLEEQISKIGYKPYTEAVLHELEEEEKVNILRGHSEKLAISFGLLKT 890
HP ++I L ++ +GY+P T VL ++++E K +L HSE+LAI+FGL+ T
Sbjct: 753 SHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIAT 812
Query: 891 TKDLTLRVCKNLRICVDCHNAAKLISKVAEREIVIRDNKRFHHF-RDGVCSCGDI 944
K L + KNLR+C DCH KLI+K+ EREIV+RD+ RFHHF DGVCSCGD
Sbjct: 813 PKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDF 867
Score = 247 bits (631), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 165/593 (27%), Positives = 300/593 (50%), Gaps = 33/593 (5%)
Query: 94 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFV 153
F +D + T L+ Y D R+VFD +K RN+ W L+SG+ +N + +VL++F+
Sbjct: 124 FLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFM 183
Query: 154 ELLSDTELKPDNFTFPCVIKACGGIADVSFGS---GVHGMAAKMGLIGDVFVSNALIAMY 210
+ ++ +P++FTF A G +A+ G VH + K GL + VSN+LI +Y
Sbjct: 184 RMQNEGT-QPNSFTFAA---ALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLY 239
Query: 211 GKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIP-DVA 269
KC V + LF+ +++V+WNS+I G + NG E+ + M ++ +
Sbjct: 240 LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM---RLNYVRLSES 296
Query: 270 TVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKN 329
+ +V+ +CA + +H VK G + + AL+ Y+KC + +A LF +
Sbjct: 297 SFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI 356
Query: 330 N-NKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELL 388
NVVSW +I F DL +MK + ++PNE T +LT+ ++
Sbjct: 357 GCVGNVVSWTAMISGFLQNDGKEEAVDLFS--EMKRKGVRPNEFTYSVILTALP----VI 410
Query: 389 SLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYA 448
S E+H ++ ++ V A + AY K G A VF G+D + + +W+A++ GYA
Sbjct: 411 SPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYA 470
Query: 449 QNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLK-SLHRGKEIHGFVIRNGLEGDS 507
Q G+ A+ F ++T ++P+ F+ S++ C S+ +GK+ HGF I++ L+
Sbjct: 471 QTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSL 530
Query: 508 FTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSI 567
+LL++Y SA +F +K LVSWN+MI+GY+Q+ ++A+ +F+ M
Sbjct: 531 CVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR 590
Query: 568 GVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACS------IIDMYAKC 621
V+ ++ + + +AC+ + G++ I+ D +A + ++D+Y++
Sbjct: 591 KVKMDGVTFIGVFAACTHAGLVEEGEKYF-----DIMVRDCKIAPTKEHNSCMVDLYSRA 645
Query: 622 GCLEQSRRVFDRLKDK-DVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPD 673
G LE++ +V + + + T W I+ +H + EK++A+ KP+
Sbjct: 646 GQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAM--KPE 696
Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 129/257 (50%), Gaps = 10/257 (3%)
Query: 92 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSI 151
T + + T L+ Y G ++ +VF + +++ W+A+++G+ + + +
Sbjct: 422 TNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKM 481
Query: 152 FVELLSDTELKPDNFTFPCVIKACGGI-ADVSFGSGVHGMAAKMGLIGDVFVSNALIAMY 210
F E L+ +KP+ FTF ++ C A + G HG A K L + VS+AL+ MY
Sbjct: 482 FGE-LTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMY 540
Query: 211 GKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVAT 270
K +E ++F+ E++LVSWNS+I G +++G + ++ D+ +M + D T
Sbjct: 541 AKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMK--KRKVKMDGVT 598
Query: 271 VVTVLPVCAGEGNVDLGILVHGLAV---KLGLTRELMVNNALVDMYAKCGFLSEA-QILF 326
+ V C G V+ G + V K+ T+E N+ +VD+Y++ G L +A +++
Sbjct: 599 FIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEH--NSCMVDLYSRAGQLEKAMKVIE 656
Query: 327 DKNNNKNVVSWNTIIGA 343
+ N W TI+ A
Sbjct: 657 NMPNPAGSTIWRTILAA 673
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 70/148 (47%), Gaps = 3/148 (2%)
Query: 81 GKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 140
GK+ H + ++ + +++ L+TMY+ G + VF + ++L WN+++SG+
Sbjct: 514 GKQFHGF-AIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYA 572
Query: 141 KNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDV 200
++ L +F E + ++K D TF V AC V G + + I
Sbjct: 573 QHGQAMKALDVFKE-MKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPT 631
Query: 201 FVSNA-LIAMYGKCAFVEEMVKLFEVMP 227
N+ ++ +Y + +E+ +K+ E MP
Sbjct: 632 KEHNSCMVDLYSRAGQLEKAMKVIENMP 659
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 527 bits (1357), Expect = e-148, Method: Compositional matrix adjust.
Identities = 320/945 (33%), Positives = 497/945 (52%), Gaps = 88/945 (9%)
Query: 77 DIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALV 136
D+ +GK H I + F+IN LI+MYS CG +RRVFD + R+L WN+++
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINN-LISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 137 SGFTKNE--LYPDVLSIFV--ELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAA 192
+ + ++ + ++ F+ +L + T ++K C V HG A
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYAC 172
Query: 193 KMGLIG-------------------------------DVFVSNALIAMYGKCAFVEEMVK 221
K+GL G DV + N ++ Y + F EE +
Sbjct: 173 KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 232
Query: 222 LFEVM------PERNLVSWNSIICGSSENGFSCESF----------DLLIKMMGCEEGFI 265
L P + + I G + +SF +++ + G E
Sbjct: 233 LSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLH 292
Query: 266 P--------------------DVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMV 305
D T + +L ++ LG VH +A+KLGL L V
Sbjct: 293 SGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTV 352
Query: 306 NNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAG----DVCGTFDLLRKMQ 361
+N+L++MY K A+ +FD + ++++SWN++I + G VC LLR
Sbjct: 353 SNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRC-- 410
Query: 362 MKEEEMKPNEVTVLNVLTSCSEKSELLSL-KELHGYSLRHGFDNDELVANAFVVAYAKCG 420
+KP++ T+ +VL + S E LSL K++H ++++ +D V+ A + AY++
Sbjct: 411 ----GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNR 466
Query: 421 SEISAENVF--HGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSL 478
AE +F H D + +WNA++ GY Q+ D K L F M D F++ ++
Sbjct: 467 CMKEAEILFERHNFD---LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATV 523
Query: 479 ILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSL 538
C L ++++GK++H + I++G + D + +L +Y+ C S+A+ FD +
Sbjct: 524 FKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD 583
Query: 539 VSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCY 598
V+W TMI+G +N A +F +M +GV P E +I ++ A S L+AL G++ H
Sbjct: 584 VAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHAN 643
Query: 599 ALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEA 658
ALK TND FV S++DMYAKCG ++ + +F R++ ++T+WNA++ G HG GKE
Sbjct: 644 ALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKET 703
Query: 659 IELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVD 718
++LF++M +LG KPD TF+G+L AC+H+GLV K+ M + +KP++EHY+C+ D
Sbjct: 704 LQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLAD 763
Query: 719 MLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAEN 778
LGRAG + A LI M EA A ++ +LL +CR G + G++VA LLELEP +
Sbjct: 764 ALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSA 823
Query: 779 YVLVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEI 838
YVL+SN+YA + KWD++++ R MK ++K+ G SWIE+ IH FVV D + + E I
Sbjct: 824 YVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELI 883
Query: 839 RGMWGRLEEQISKIGYKPYTEAVLHELEEEEKVNILRGHSEKLAISFGLLKTTKDLTLRV 898
+ I + GY P T+ L ++EEEEK L HSEKLA++FGLL T +RV
Sbjct: 884 YRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRV 943
Query: 899 CKNLRICVDCHNAAKLISKVAEREIVIRDNKRFHHFRDGVCSCGD 943
KNLR+C DCHNA K I+KV REIV+RD RFH F+DG+CSCGD
Sbjct: 944 IKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGD 988
Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 159/590 (26%), Positives = 281/590 (47%), Gaps = 65/590 (11%)
Query: 179 ADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 238
+D+ G H + F+ N LI+MY KC + ++F+ MP+R+LVSWNSI+
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 239 CGSSENGFSC------ESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHG 292
+++ C ++F LL +++ + + + T+ +L +C G V HG
Sbjct: 113 AAYAQSS-ECVVENIQQAF-LLFRILRQDVVYTSRM-TLSPMLKLCLHSGYVWASESFHG 169
Query: 293 LAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCG 352
A K+GL + V ALV++Y K G + E ++LF++ ++VV WN ++ A+ G
Sbjct: 170 YACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEE 229
Query: 353 TFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAF 412
DL + PNE+T L +L S G D+D +F
Sbjct: 230 AIDL--SSAFHSSGLNPNEIT-LRLLARIS------------------GDDSDAGQVKSF 268
Query: 413 VVAYAKCGSEISAENVFHGMDSRTVSS---WNALICGYAQNGDHLKALDYFLQMTHSDLE 469
+G D+ +VS N + Y +G + L F M SD+E
Sbjct: 269 A----------------NGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVE 312
Query: 470 PDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVL 529
D + ++ + SL G+++H ++ GL+ SL+++Y K AR +
Sbjct: 313 CDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTV 372
Query: 530 FDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLS-A 588
FD M ++ L+SWN++IAG +QN L VEA+ LF ++ G++P + ++ S+L A S L
Sbjct: 373 FDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEG 432
Query: 589 LRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGG 648
L L K+ H +A+K +D+FV+ ++ID Y++ C++++ +F+R + D+ +WNA++ G
Sbjct: 433 LSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAG 491
Query: 649 HGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKP 708
+ G + ++LF M G + D FT + C + G +++HA
Sbjct: 492 YTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQG-------KQVHAYAI 544
Query: 709 K------LEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSC 752
K L + ++DM + G + A +P D W++++ C
Sbjct: 545 KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA-WTTMISGC 593
Score = 183 bits (464), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 221/425 (52%), Gaps = 11/425 (2%)
Query: 63 EATGVLLQACGHEKD-IEIGKRVHELISASTQFSNDFIINTRLITMY-SLCGFPLDSRRV 120
+ T +L+ A + D + +G++VH ++ ++ LI MY L F +R V
Sbjct: 315 QVTFILMLATAVKVDSLALGQQVH-CMALKLGLDLMLTVSNSLINMYCKLRKFGF-ARTV 372
Query: 121 FDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIAD 180
FD++ R+L WN++++G +N L + + +F++LL LKPD +T V+KA + +
Sbjct: 373 FDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR-CGLKPDQYTMTSVLKAASSLPE 431
Query: 181 -VSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 239
+S VH A K+ + D FVS ALI Y + ++E LFE +LV+WN+++
Sbjct: 432 GLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMMA 490
Query: 240 GSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGL 299
G +++ ++ L M ++G D T+ TV C ++ G VH A+K G
Sbjct: 491 GYTQSHDGHKTLKLFALMH--KQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGY 548
Query: 300 TRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRK 359
+L V++ ++DMY KCG +S AQ FD + V+W T+I G+ F + +
Sbjct: 549 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQ 608
Query: 360 MQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKC 419
M++ + P+E T+ + + S + L +++H +L+ ND V + V YAKC
Sbjct: 609 MRLM--GVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKC 666
Query: 420 GSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLI 479
GS A +F ++ +++WNA++ G AQ+G+ + L F QM ++PD + ++
Sbjct: 667 GSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVL 726
Query: 480 LACTH 484
AC+H
Sbjct: 727 SACSH 731
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 195/400 (48%), Gaps = 19/400 (4%)
Query: 60 DLKEATGVLLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRR 119
D T VL A + + + K+VH S+ F+ +T LI YS ++
Sbjct: 415 DQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFV-STALIDAYSRNRCMKEAEI 473
Query: 120 VFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIA 179
+F+ +L WNA+++G+T++ L +F + E + D+FT V K CG +
Sbjct: 474 LFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE-RSDDFTLATVFKTCGFLF 531
Query: 180 DVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 239
++ G VH A K G D++VS+ ++ MY KC + F+ +P + V+W ++I
Sbjct: 532 AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMIS 591
Query: 240 GSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGL 299
G ENG +F + +M G +PD T+ T+ + ++ G +H A+KL
Sbjct: 592 GCIENGEEERAFHVFSQMRLM--GVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNC 649
Query: 300 TRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRK 359
T + V +LVDMYAKCG + +A LF + N+ +WN ++ + G+ T L +
Sbjct: 650 TNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFK- 708
Query: 360 MQMKEEEMKPNEVTVLNVLTSCSEKSELLS-----LKELHG-YSLRHGFDNDELVANAFV 413
QMK +KP++VT + VL++CS S L+S ++ +HG Y ++ ++ +A+A
Sbjct: 709 -QMKSLGIKPDKVTFIGVLSACSH-SGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADAL- 765
Query: 414 VAYAKCGSEISAENVFHGMD-SRTVSSWNALICGYAQNGD 452
+ G AEN+ M + S + L+ GD
Sbjct: 766 ---GRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGD 802
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 9/206 (4%)
Query: 376 NVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSR 435
N +TS S+L+ K H L + + + N + Y+KCGS A VF M R
Sbjct: 48 NAITS----SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDR 103
Query: 436 TVSSWNALICGYAQNGDHL-----KALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHR 490
+ SWN+++ YAQ+ + + +A F + + ++ ++ C H +
Sbjct: 104 DLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWA 163
Query: 491 GKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQ 550
+ HG+ + GL+GD F +L+++Y+ K +VLF+EM + +V WN M+ Y +
Sbjct: 164 SESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223
Query: 551 NKLPVEAIVLFRRMFSIGVQPCEISI 576
EAI L S G+ P EI++
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEITL 249
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 519 bits (1336), Expect = e-146, Method: Compositional matrix adjust.
Identities = 282/780 (36%), Positives = 441/780 (56%), Gaps = 7/780 (0%)
Query: 164 DNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 223
D T V++ C + G V G + D + + L MY C ++E ++F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 224 EVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGN 283
+ + + WN ++ +++G S L KMM G D T V + +
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS--SGVEMDSYTFSCVSKSFSSLRS 210
Query: 284 VDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGA 343
V G +HG +K G V N+LV Y K + A+ +FD+ ++V+SWN+II
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 344 FSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSL-KELHGYSLRHGF 402
+ G + +QM ++ + T+++V C++ S L+SL + +H ++ F
Sbjct: 271 YVSNGLAEKGLSVF--VQMLVSGIEIDLATIVSVFAGCAD-SRLISLGRAVHSIGVKACF 327
Query: 403 DNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQ 462
++ N + Y+KCG SA+ VF M R+V S+ ++I GYA+ G +A+ F +
Sbjct: 328 SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE 387
Query: 463 MTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEK 522
M + PD++++ +++ C + L GK +H ++ N L D F +L+ +Y C
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447
Query: 523 SSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFS-IGVQPCEISIVSILS 581
A ++F EM K ++SWNT+I GYS+N EA+ LF + P E ++ +L
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 507
Query: 582 ACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTS 641
AC+ LSA G+E H Y ++ +D VA S++DMYAKCG L + +FD + KD+ S
Sbjct: 508 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 567
Query: 642 WNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQ 701
W +I G+G+HG+GKEAI LF +M G + D +FV +L AC+H+GLV+ G ++F+ M+
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Query: 702 KLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYGALKMG 761
++P +EHYAC+VDML R G L A++ I MP DA IW +LL CR + +K+
Sbjct: 628 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLA 687
Query: 762 EKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGCSWIELGGN 821
EKVA+ + ELEP+ YVL++NIYA +EKW+ V+ +R+R+ +RGL+K GCSWIE+ G
Sbjct: 688 EKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGR 747
Query: 822 IHSFVVGDNMHPEWEEIRGMWGRLEEQISKIGYKPYTEAVLHELEEEEKVNILRGHSEKL 881
++ FV GD+ +PE E I ++ ++ + GY P T+ L + EE EK L GHSEKL
Sbjct: 748 VNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKL 807
Query: 882 AISFGLLKTTKDLTLRVCKNLRICVDCHNAAKLISKVAEREIVIRDNKRFHHFRDGVCSC 941
A++ G++ + +RV KNLR+C DCH AK +SK+ REIV+RD+ RFH F+DG CSC
Sbjct: 808 AMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSC 867
Score = 310 bits (793), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 224/701 (31%), Positives = 359/701 (51%), Gaps = 41/701 (5%)
Query: 1 NKHSLRSIFKAKSSLS-LSAKTNNASTEGLHFLQEITTLCEESKSLNKALSLL-QENLHN 58
N+ SLR++ S++ +A+T+ F ES +L A+ LL +
Sbjct: 40 NRASLRTVSDCVDSITTFDRSVTDANTQLRRFC--------ESGNLENAVKLLCVSGKWD 91
Query: 59 ADLKEATGVLLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSR 118
D + VL Q C K ++ GK V I + F D + ++L MY+ CG ++
Sbjct: 92 IDPRTLCSVL-QLCADSKSLKDGKEVDNFIRGNG-FVIDSNLGSKLSLMYTNCGDLKEAS 149
Query: 119 RVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGI 178
RVFD +K WN L++ K+ + + +F +++S + ++ D++TF CV K+ +
Sbjct: 150 RVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS-SGVEMDSYTFSCVSKSFSSL 208
Query: 179 ADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII 238
V G +HG K G V N+L+A Y K V+ K+F+ M ER+++SWNSII
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 268
Query: 239 CGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLG 298
G NG + + + ++M+ G D+AT+V+V CA + LG VH + VK
Sbjct: 269 NGYVSNGLAEKGLSVFVQML--VSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC 326
Query: 299 LTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFS---MAGDVCGTFD 355
+RE N L+DMY+KCG L A+ +F + ++++VVS+ ++I ++ +AG+ F+
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 356 LLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVA 415
+M+EE + P+ TV VL C+ L K +H + + D V+NA +
Sbjct: 387 -----EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDM 441
Query: 416 YAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYF-LQMTHSDLEPDLFS 474
YAKCGS AE VF M + + SWN +I GY++N +AL F L + PD +
Sbjct: 442 YAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERT 501
Query: 475 IGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEME 534
+ ++ AC L + +G+EIHG+++RNG D SL+ +Y C A +LFD++
Sbjct: 502 VACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA 561
Query: 535 DKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKE 594
K LVSW MIAGY + EAI LF +M G++ EIS VS+L ACS + G
Sbjct: 562 SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG-- 619
Query: 595 THCYALKAILTNDAFV-------ACSIIDMYAKCGCLEQSRRVFDRLK-DKDVTSWNAII 646
+ I+ ++ + AC I+DM A+ G L ++ R + + D T W A++
Sbjct: 620 ---WRFFNIMRHECKIEPTVEHYAC-IVDMLARTGDLIKAYRFIENMPIPPDATIWGALL 675
Query: 647 GGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHA 687
G IH K A ++ EK+ L +P+ + +LMA +A
Sbjct: 676 CGCRIHHDVKLAEKVAEKVFEL--EPENTGYY-VLMANIYA 713
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 509 bits (1310), Expect = e-143, Method: Compositional matrix adjust.
Identities = 289/812 (35%), Positives = 453/812 (55%), Gaps = 42/812 (5%)
Query: 169 PCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 228
P +K C I ++ H K GL DV L+A + E + EV
Sbjct: 36 PSSLKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN 92
Query: 229 R----NLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNV 284
+NS+I G + +G E+ L ++MM G PD T L CA
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMN--SGISPDKYTFPFGLSACAKSRAK 150
Query: 285 DLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAF 344
GI +HGL VK+G ++L V N+LV YA+CG L A+ +FD+ + +NVVSW ++I +
Sbjct: 151 GNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGY 210
Query: 345 SMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDN 404
+ DL +M +++EE+ PN VT++ V+++C++ +L + ++++ + G +
Sbjct: 211 ARRDFAKDAVDLFFRM-VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEV 269
Query: 405 DELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMT 464
++L+ +A V Y KC + A+ +F + + NA+ Y + G +AL F M
Sbjct: 270 NDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM 329
Query: 465 HSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSS 524
S + PD S+ S I +C+ L+++ GK HG+V+RNG E +L+ +YM C +
Sbjct: 330 DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQD 389
Query: 525 SARVLFDEMEDKSLVSWNTMIAGYSQN-----------KLPVEAIV-------------L 560
+A +FD M +K++V+WN+++AGY +N +P + IV L
Sbjct: 390 TAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSL 449
Query: 561 FRRMFSI--------GVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVAC 612
F + GV ++++SI SAC L AL L K + Y K + D +
Sbjct: 450 FEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGT 509
Query: 613 SIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKP 672
+++DM+++CG E + +F+ L ++DV++W A IG + G + AIELF+ M+ G KP
Sbjct: 510 TLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKP 569
Query: 673 DTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKL 732
D FVG L AC+H GLV+ G + F M KLH V P+ HY C+VD+LGRAG L++A +L
Sbjct: 570 DGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQL 629
Query: 733 IIEMPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKW 792
I +MP E + IW+SLL +CR G ++M A+ + L P++ +YVL+SN+YA + +W
Sbjct: 630 IEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRW 689
Query: 793 DDVRMMRQRMKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQISKI 852
+D+ +R MKE+GL+K G S I++ G H F GD HPE I M + ++ S +
Sbjct: 690 NDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHL 749
Query: 853 GYKPYTEAVLHELEEEEKVNILRGHSEKLAISFGLLKTTKDLTLRVCKNLRICVDCHNAA 912
G+ P VL +++E+EK+ +L HSEKLA+++GL+ + K T+R+ KNLR+C DCH+ A
Sbjct: 750 GHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFA 809
Query: 913 KLISKVAEREIVIRDNKRFHHFRDGVCSCGDI 944
K SKV REI++RDN RFH+ R G CSCGD
Sbjct: 810 KFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 251 bits (640), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 170/648 (26%), Positives = 306/648 (47%), Gaps = 81/648 (12%)
Query: 130 FQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHG 189
F +N+L+ G+ + L + + +F+ ++ ++ + PD +TFP + AC G +HG
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMM-NSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 190 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCE 249
+ KMG D+FV N+L+ Y +C ++ K+F+ M ERN+VSW S+ICG + F+ +
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 250 SFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNAL 309
+ DL +M+ EE P+ T+V V+ CA +++ G V+ G+ ++ +AL
Sbjct: 219 AVDLFFRMVRDEE-VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSAL 277
Query: 310 VDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAG---DVCGTFDLLRKMQMKEEE 366
VDMY KC + A+ LFD+ N+ N + + G + G F+L M +
Sbjct: 278 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNL-----MMDSG 332
Query: 367 MKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAE 426
++P+ +++L+ ++SCS+ +L K HGY LR+GF++ + + NA + Y KC + +A
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 427 NVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDL------------------ 468
+F M ++TV +WN+++ GY +NG+ A + F M ++
Sbjct: 393 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEE 452
Query: 469 --------------EPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLL 514
D ++ S+ AC HL +L K I+ ++ +NG++ D G +L+
Sbjct: 453 AIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLV 512
Query: 515 SLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEI 574
++ C SA +F+ + ++ + +W I + AI LF M G++P +
Sbjct: 513 DMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGV 572
Query: 575 SIVSILSACSQLSALRLGKETHCYALK--AILTNDAFVACSIIDMYAKCGCLEQSRRVFD 632
+ V L+ACS ++ GKE LK + D C ++D+ + G LE
Sbjct: 573 AFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGC-MVDLLGRAGLLE------- 624
Query: 633 RLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVEN 692
EA++L E M +P+ + +L AC G VE
Sbjct: 625 ------------------------EAVQLIEDM---PMEPNDVIWNSLLAACRVQGNVEM 657
Query: 693 GLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEA 740
++Q L + Y + ++ AG+ +D K+ + M E+
Sbjct: 658 AAYAAEKIQVL--APERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKG 703
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 216/457 (47%), Gaps = 35/457 (7%)
Query: 69 LQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 128
L AC + G ++H LI ++ D + L+ Y+ CG +R+VFD + RN
Sbjct: 141 LSACAKSRAKGNGIQIHGLI-VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERN 199
Query: 129 LFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVH 188
+ W +++ G+ + + D + +F ++ D E+ P++ T CVI AC + D+ G V+
Sbjct: 200 VVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY 259
Query: 189 GMAAKMGL-IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFS 247
G+ + D+ VS AL+ MY KC ++ +LF+ NL N++ G +
Sbjct: 260 AFIRNSGIEVNDLMVS-ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLT 318
Query: 248 CESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNN 307
E+ + MM + G PD ++++ + C+ N+ G HG ++ G + N
Sbjct: 319 REALGVFNLMM--DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN 376
Query: 308 ALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMK---- 363
AL+DMY KC A +FD+ +NK VV+WN+I+ + G+V ++ M K
Sbjct: 377 ALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS 436
Query: 364 --------------------------EEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYS 397
+E + + VT++++ ++C L K ++ Y
Sbjct: 437 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 398 LRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKAL 457
++G D + V +++CG SA ++F+ + +R VS+W A I A G+ +A+
Sbjct: 497 EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAI 556
Query: 458 DYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEI 494
+ F M L+PD + + AC+H + +GKEI
Sbjct: 557 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEI 593
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 500 bits (1287), Expect = e-140, Method: Compositional matrix adjust.
Identities = 280/822 (34%), Positives = 449/822 (54%), Gaps = 56/822 (6%)
Query: 169 PCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 228
P I C I+ V +H G++ + +++ LI+ Y + V L P
Sbjct: 32 PPFIHKCKTISQVKL---IHQKLLSFGIL-TLNLTSHLISTYISVGCLSHAVSLLRRFPP 87
Query: 229 RN--LVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDL 286
+ + WNS+I +NG C + L + + + PD T V C +V
Sbjct: 88 SDAGVYHWNSLIRSYGDNG--CANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRC 145
Query: 287 GILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSM 346
G H L++ G + V NALV MY++C LS+A+ +FD+ + +VVSWN+II +++
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAK 205
Query: 347 AGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDE 406
G ++ +M E +P+ +T++NVL C+ K+LH +++ +
Sbjct: 206 LGKPKVALEMFSRMT-NEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNM 264
Query: 407 LVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNAL----------------------- 443
V N V YAKCG A VF M + V SWNA+
Sbjct: 265 FVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEE 324
Query: 444 ------------ICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRG 491
I GYAQ G +AL QM S ++P+ ++ S++ C + +L G
Sbjct: 325 KIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHG 384
Query: 492 KEIHGFVIR-------NGLEGDSFTGISLLSLYMHCEKSSSARVLFDEM--EDKSLVSWN 542
KEIH + I+ NG ++ L+ +Y C+K +AR +FD + +++ +V+W
Sbjct: 385 KEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWT 444
Query: 543 TMIAGYSQNKLPVEAIVLFRRMFSIGVQ--PCEISIVSILSACSQLSALRLGKETHCYAL 600
MI GYSQ+ +A+ L MF Q P +I L AC+ L+ALR+GK+ H YAL
Sbjct: 445 VMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYAL 504
Query: 601 KAILTN-DAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAI 659
+ FV+ +IDMYAKCG + +R VFD + K+ +W +++ G+G+HGYG+EA+
Sbjct: 505 RNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEAL 564
Query: 660 ELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDM 719
+F++M +G K D T + +L AC+H+G+++ G++YF++M+ + V P EHYAC+VD+
Sbjct: 565 GIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDL 624
Query: 720 LGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAENY 779
LGRAG+L+ A +LI EMP E +W + L CR +G +++GE A+ + EL + +Y
Sbjct: 625 LGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSY 684
Query: 780 VLVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEIR 839
L+SN+YA + +W DV +R M+ +G++K GCSW+E +F VGD HP +EI
Sbjct: 685 TLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIY 744
Query: 840 GMWGRLEEQISKIGYKPYTEAVLHELEEEEKVNILRGHSEKLAISFGLLKTTKDLTLRVC 899
+ ++I IGY P T LH++++EEK ++L HSEKLA+++G+L T + +R+
Sbjct: 745 QVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRIT 804
Query: 900 KNLRICVDCHNAAKLISKVAEREIVIRDNKRFHHFRDGVCSC 941
KNLR+C DCH A +S++ + +I++RD+ RFHHF++G CSC
Sbjct: 805 KNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSC 846
Score = 283 bits (724), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 185/604 (30%), Positives = 295/604 (48%), Gaps = 52/604 (8%)
Query: 129 LFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVH 188
++ WN+L+ + N L +F L+ PDN+TFP V KACG I+ V G H
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLF-GLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAH 150
Query: 189 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSC 248
++ G I +VFV NAL+AMY +C + + K+F+ M ++VSWNSII ++ G
Sbjct: 151 ALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPK 210
Query: 249 ESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNA 308
+ ++ +M E G PD T+V VLP CA G LG +H AV + + + V N
Sbjct: 211 VALEMFSRMTN-EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNC 269
Query: 309 LVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEM- 367
LVDMYAKCG + EA +F + K+VVSWN ++ +S G L KMQ ++ +M
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
Query: 368 --------------------------------KPNEVTVLNVLTSCSEKSELLSLKELHG 395
KPNEVT+++VL+ C+ L+ KE+H
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389
Query: 396 YSLRHGFD-------NDELVANAFVVAYAKCGSEISAENVFHGMDS--RTVSSWNALICG 446
Y++++ D ++ +V N + YAKC +A +F + R V +W +I G
Sbjct: 390 YAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGG 449
Query: 447 YAQNGDHLKALDYFLQMTHSDLE--PDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLE 504
Y+Q+GD KAL+ +M D + P+ F+I ++AC L +L GK+IH + +RN
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN 509
Query: 505 GDS-FTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRR 563
F L+ +Y C S AR++FD M K+ V+W +++ GY + EA+ +F
Sbjct: 510 AVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDE 569
Query: 564 MFSIGVQPCEISIVSILSACSQLSALRLGKE--THCYALKAILTNDAFVACSIIDMYAKC 621
M IG + ++++ +L ACS + G E + + AC ++D+ +
Sbjct: 570 MRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYAC-LVDLLGRA 628
Query: 622 GCLEQSRRVFDRLK-DKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPD-TFTFVG 679
G L + R+ + + + W A + IHG + EK+ L D ++T +
Sbjct: 629 GRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLS 688
Query: 680 ILMA 683
L A
Sbjct: 689 NLYA 692
Score = 207 bits (526), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 135/469 (28%), Positives = 226/469 (48%), Gaps = 44/469 (9%)
Query: 68 LLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 127
+ +ACG + G+ H L S T F ++ + L+ MYS C D+R+VFD +
Sbjct: 133 VFKACGEISSVRCGESAHAL-SLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVW 191
Query: 128 NLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGV 187
++ WN+++ + K L +F + ++ +PDN T V+ C + S G +
Sbjct: 192 DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQL 251
Query: 188 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFS 247
H A +I ++FV N L+ MY KC ++E +F M +++VSWN+++ G S+ G
Sbjct: 252 HCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRF 311
Query: 248 CESFDLLIKM-----------------------MGCE----------EGFIPDVATVVTV 274
++ L KM +G E G P+ T+++V
Sbjct: 312 EDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISV 371
Query: 275 LPVCAGEGNVDLGILVHGLAVKL-------GLTRELMVNNALVDMYAKCGFLSEAQILFD 327
L CA G + G +H A+K G E MV N L+DMYAKC + A+ +FD
Sbjct: 372 LSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFD 431
Query: 328 K--NNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKS 385
++VV+W +IG +S GD +LL +M ++ + +PN T+ L +C+ +
Sbjct: 432 SLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLA 491
Query: 386 ELLSLKELHGYSLRHGFDNDEL-VANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALI 444
L K++H Y+LR+ + L V+N + YAKCGS A VF M ++ +W +L+
Sbjct: 492 ALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLM 551
Query: 445 CGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKE 493
GY +G +AL F +M + D ++ ++ AC+H + +G E
Sbjct: 552 TGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME 600
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 9/196 (4%)
Query: 46 NKALSLLQENLHNADLKEATGVL-----LQACGHEKDIEIGKRVHELISASTQFSNDFII 100
NKAL LL E + D + L AC + IGK++H + Q + +
Sbjct: 457 NKALELLSE-MFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 515
Query: 101 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTE 160
+ LI MY+ CG D+R VFD++ +N W +L++G+ + + L IF E +
Sbjct: 516 SNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDE-MRRIG 574
Query: 161 LKPDNFTFPCVIKACGGIADVSFG-SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 219
K D T V+ AC + G + M G+ L+ + G+ +
Sbjct: 575 FKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAA 634
Query: 220 VKLFEVMP-ERNLVSW 234
++L E MP E V W
Sbjct: 635 LRLIEEMPMEPPPVVW 650
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 500 bits (1287), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/806 (35%), Positives = 461/806 (57%), Gaps = 21/806 (2%)
Query: 153 VELLSDTELKP-DNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYG 211
++L++ ++P D+ TF ++K+C D G VH + + D + N+LI++Y
Sbjct: 49 LDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYS 108
Query: 212 KCAFVEEMVKLFEVMP---ERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDV 268
K + +FE M +R++VSW++++ NG ++ + ++ + E G +P+
Sbjct: 109 KSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFL--ELGLVPND 166
Query: 269 ATVVTVLPVCAGEGNVDLGILVHGLAVKLG-LTRELMVNNALVDMYAKC-GFLSEAQILF 326
V+ C+ V +G + G +K G ++ V +L+DM+ K A +F
Sbjct: 167 YCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVF 226
Query: 327 DKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSE 386
DK + NVV+W +I G M + E ++ T+ +V ++C+E
Sbjct: 227 DKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFE--SDKFTLSSVFSACAELEN 284
Query: 387 LLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAEN---VFHGMDSRTVSSWNAL 443
L K+LH +++R G +D V + V YAKC ++ S ++ VF M+ +V SW AL
Sbjct: 285 LSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342
Query: 444 ICGYAQNGD-HLKALDYFLQM-THSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRN 501
I GY +N + +A++ F +M T +EP+ F+ S AC +L GK++ G +
Sbjct: 343 ITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR 402
Query: 502 GLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLF 561
GL +S S++S+++ ++ A+ F+ + +K+LVS+NT + G +N +A L
Sbjct: 403 GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLL 462
Query: 562 RRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKC 621
+ + + S+LS + + ++R G++ H +K L+ + V ++I MY+KC
Sbjct: 463 SEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKC 522
Query: 622 GCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGIL 681
G ++ + RVF+ +++++V SW ++I G HG+ +E F +M+ G KP+ T+V IL
Sbjct: 523 GSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAIL 582
Query: 682 MACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEAD 741
AC+H GLV G ++F+ M + H +KPK+EHYAC+VD+L RAG L DAF+ I MP +AD
Sbjct: 583 SACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQAD 642
Query: 742 AGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQR 801
+W + L +CR + ++G+ A+ +LEL+P++ Y+ +SNIYA + KW++ MR++
Sbjct: 643 VLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRK 702
Query: 802 MKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQISKIGYKPYTEAV 861
MKER L KE GCSWIE+G IH F VGD HP +I RL +I + GY P T+ V
Sbjct: 703 MKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLV 762
Query: 862 LHEL----EEEEKVNILRGHSEKLAISFGLLKTTKDLTLRVCKNLRICVDCHNAAKLISK 917
LH+L +E EK +L HSEK+A++FGL+ T+K +RV KNLR+C DCHNA K IS
Sbjct: 763 LHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYIST 822
Query: 918 VAEREIVIRDNKRFHHFRDGVCSCGD 943
V+ REIV+RD RFHHF+DG CSC D
Sbjct: 823 VSGREIVLRDLNRFHHFKDGKCSCND 848
Score = 231 bits (589), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 170/653 (26%), Positives = 317/653 (48%), Gaps = 23/653 (3%)
Query: 68 LLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK-- 125
LL++C +D +GK VH + D ++ LI++YS G + VF++++
Sbjct: 68 LLKSCIRARDFRLGKLVHARL-IEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRF 126
Query: 126 -TRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFG 184
R++ W+A+++ + N D + +FVE L + L P+++ + VI+AC V G
Sbjct: 127 GKRDVVSWSAMMACYGNNGRELDAIKVFVEFL-ELGLVPNDYCYTAVIRACSNSDFVGVG 185
Query: 185 SGVHGMAAKMG-LIGDVFVSNALIAMY--GKCAFVEEMVKLFEVMPERNLVSWNSIICGS 241
G K G DV V +LI M+ G+ +F E K+F+ M E N+V+W +I
Sbjct: 186 RVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSF-ENAYKVFDKMSELNVVTWTLMITRC 244
Query: 242 SENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTR 301
+ GF E+ + M+ GF D T+ +V CA N+ LG +H A++ GL
Sbjct: 245 MQMGFPREAIRFFLDMV--LSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD 302
Query: 302 ELMVNNALVDMYAKC---GFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLR 358
+ V +LVDMYAKC G + + + +FD+ + +V+SW +I + ++ L
Sbjct: 303 D--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLF 360
Query: 359 KMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAK 418
+ + ++PN T + +C S+ K++ G + + G ++ VAN+ + + K
Sbjct: 361 SEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVK 420
Query: 419 CGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSL 478
A+ F + + + S+N + G +N + +A ++T +L F+ SL
Sbjct: 421 SDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASL 480
Query: 479 ILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSL 538
+ ++ S+ +G++IH V++ GL + +L+S+Y C +A +F+ ME++++
Sbjct: 481 LSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV 540
Query: 539 VSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKE--TH 596
+SW +MI G++++ + + F +M GV+P E++ V+ILSACS + + G
Sbjct: 541 ISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNS 600
Query: 597 CYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLK-DKDVTSWNAIIGGHGIHGYG 655
Y I AC ++D+ + G L + + + DV W +G +H
Sbjct: 601 MYEDHKIKPKMEHYAC-MVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNT 659
Query: 656 KEAIELFEKMLALG-HKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVK 707
+ K+L L ++P + + + AC AG E + +M++ + VK
Sbjct: 660 ELGKLAARKILELDPNEPAAYIQLSNIYAC--AGKWEESTEMRRKMKERNLVK 710
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 499 bits (1285), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/674 (38%), Positives = 394/674 (58%), Gaps = 44/674 (6%)
Query: 309 LVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAF---SMAGDVCGTFDLLRKMQMKEE 365
++ +Y L EA +LF + V++W ++I F S+ +F ++M+
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASF-----VEMRAS 99
Query: 366 EMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKC---GSE 422
P+ +VL SC+ +L + +HG+ +R G D D NA + YAK GS+
Sbjct: 100 GRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSK 159
Query: 423 ISAENVFHGMDSRT---------------------------------VSSWNALICGYAQ 449
IS NVF M RT V S+N +I GYAQ
Sbjct: 160 ISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQ 219
Query: 450 NGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFT 509
+G + AL +M +DL+PD F++ S++ + + +GKEIHG+VIR G++ D +
Sbjct: 220 SGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYI 279
Query: 510 GISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGV 569
G SL+ +Y + + +F + + +SWN+++AGY QN EA+ LFR+M + V
Sbjct: 280 GSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKV 339
Query: 570 QPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRR 629
+P ++ S++ AC+ L+ L LGK+ H Y L+ ++ F+A +++DMY+KCG ++ +R+
Sbjct: 340 KPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARK 399
Query: 630 VFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGL 689
+FDR+ D SW AII GH +HG+G EA+ LFE+M G KP+ FV +L AC+H GL
Sbjct: 400 IFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGL 459
Query: 690 VENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLL 749
V+ YF+ M K++ + +LEHYA V D+LGRAGKL++A+ I +M E +WS+LL
Sbjct: 460 VDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLL 519
Query: 750 RSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQK 809
SC + L++ EKVA+ + ++ + YVL+ N+YA + +W ++ +R RM+++GL+K
Sbjct: 520 SSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRK 579
Query: 810 EAGCSWIELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQISKIGYKPYTEAVLHELEEEE 869
+ CSWIE+ H FV GD HP ++I + EQ+ K GY T VLH+++EE
Sbjct: 580 KPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEH 639
Query: 870 KVNILRGHSEKLAISFGLLKTTKDLTLRVCKNLRICVDCHNAAKLISKVAEREIVIRDNK 929
K +L GHSE+LA++FG++ T T+RV KN+RIC DCH A K ISK+ EREI++RDN
Sbjct: 640 KRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNS 699
Query: 930 RFHHFRDGVCSCGD 943
RFHHF G CSCGD
Sbjct: 700 RFHHFNRGNCSCGD 713
Score = 209 bits (533), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 149/526 (28%), Positives = 257/526 (48%), Gaps = 56/526 (10%)
Query: 203 SNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSII-CGSSENGFSCESFDLLIKMMGCE 261
++ +I++Y + E + LF+ + +++W S+I C + ++ FS ++ ++M
Sbjct: 42 ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFS-KALASFVEMRA-- 98
Query: 262 EGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKC-GFLS 320
G PD +VL C ++ G VHG V+LG+ +L NAL++MYAK G S
Sbjct: 99 SGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGS 158
Query: 321 EAQI-----------------------------------LFDKNNNKNVVSWNTIIGAFS 345
+ + +F+ K+VVS+NTII ++
Sbjct: 159 KISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYA 218
Query: 346 MAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDND 405
+G ++R +M ++KP+ T+ +VL SE +++ KE+HGY +R G D+D
Sbjct: 219 QSGMYEDALRMVR--EMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSD 276
Query: 406 ELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTH 465
+ ++ V YAK +E VF + R SWN+L+ GY QNG + +AL F QM
Sbjct: 277 VYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVT 336
Query: 466 SDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSS 525
+ ++P + S+I AC HL +LH GK++HG+V+R G + F +L+ +Y C +
Sbjct: 337 AKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKA 396
Query: 526 ARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQ 585
AR +FD M VSW +I G++ + EA+ LF M GV+P +++ V++L+ACS
Sbjct: 397 ARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSH 456
Query: 586 LSAL-----RLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVT 640
+ + T Y L L + A VA D+ + G LE++ ++ +
Sbjct: 457 VGLVDEAWGYFNSMTKVYGLNQELEHYAAVA----DLLGRAGKLEEAYNFISKMCVEPTG 512
Query: 641 S-WNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACN 685
S W+ ++ +H + +EL EK+ D+ ++ CN
Sbjct: 513 SVWSTLLSSCSVH----KNLELAEKVAEKIFTVDSENMGAYVLMCN 554
Score = 201 bits (511), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 221/418 (52%), Gaps = 41/418 (9%)
Query: 104 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKP 163
+I++Y+ ++ +F +LK+ + W +++ FT L+ L+ FVE+ + P
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRC-P 103
Query: 164 DNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGK----------- 212
D+ FP V+K+C + D+ FG VHG ++G+ D++ NAL+ MY K
Sbjct: 104 DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVG 163
Query: 213 ----------------------CAF---VEEMVKLFEVMPERNLVSWNSIICGSSENGFS 247
C ++ + ++FEVMP +++VS+N+II G +++G
Sbjct: 164 NVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMY 223
Query: 248 CESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNN 307
++ +++ MG + PD T+ +VLP+ + +V G +HG ++ G+ ++ + +
Sbjct: 224 EDALR-MVREMGTTD-LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGS 281
Query: 308 ALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEM 367
+LVDMYAK + +++ +F + ++ +SWN+++ + G L R QM ++
Sbjct: 282 SLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFR--QMVTAKV 339
Query: 368 KPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAEN 427
KP V +V+ +C+ + L K+LHGY LR GF ++ +A+A V Y+KCG+ +A
Sbjct: 340 KPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARK 399
Query: 428 VFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHL 485
+F M+ SW A+I G+A +G +A+ F +M ++P+ + +++ AC+H+
Sbjct: 400 IFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHV 457
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 151/311 (48%), Gaps = 10/311 (3%)
Query: 41 ESKSLNKALSLLQENLHNADLKEATGVL---LQACGHEKDIEIGKRVHELISASTQFSND 97
+S AL +++E + DLK + L L D+ GK +H + +D
Sbjct: 219 QSGMYEDALRMVRE-MGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYV-IRKGIDSD 276
Query: 98 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLS 157
I + L+ MY+ DS RVF L R+ WN+LV+G+ +N Y + L +F ++++
Sbjct: 277 VYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVT 336
Query: 158 DTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVE 217
++KP F VI AC +A + G +HG + G ++F+++AL+ MY KC ++
Sbjct: 337 -AKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIK 395
Query: 218 EMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPV 277
K+F+ M + VSW +II G + +G E+ L +M +G P+ V VL
Sbjct: 396 AARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK--RQGVKPNQVAFVAVLTA 453
Query: 278 CAGEGNVDLGILVHGLAVKL-GLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVS 336
C+ G VD K+ GL +EL A+ D+ + G L EA K + S
Sbjct: 454 CSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGS 513
Query: 337 -WNTIIGAFSM 346
W+T++ + S+
Sbjct: 514 VWSTLLSSCSV 524
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 499 bits (1285), Expect = e-140, Method: Compositional matrix adjust.
Identities = 273/752 (36%), Positives = 426/752 (56%), Gaps = 18/752 (2%)
Query: 197 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIK 256
I +V +S L+ +Y V F+ + R++ +WN +I G G S E
Sbjct: 83 IQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSL 142
Query: 257 MMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKC 316
M G PD T +VL C V G +H LA+K G ++ V +L+ +Y++
Sbjct: 143 FM-LSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRY 198
Query: 317 GFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDL---LRKMQMKEEEMKPNEVT 373
+ A+ILFD+ +++ SWN +I + +G+ L LR M + VT
Sbjct: 199 KAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM---------DSVT 249
Query: 374 VLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMD 433
V+++L++C+E + +H YS++HG +++ V+N + YA+ G + VF M
Sbjct: 250 VVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMY 309
Query: 434 SRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKE 493
R + SWN++I Y N L+A+ F +M S ++PD ++ SL + L + +
Sbjct: 310 VRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRS 369
Query: 494 IHGFVIRNGLEGDSFT-GISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNK 552
+ GF +R G + T G +++ +Y SAR +F+ + + ++SWNT+I+GY+QN
Sbjct: 370 VQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNG 429
Query: 553 LPVEAIVLFRRMFSIG-VQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVA 611
EAI ++ M G + + + VS+L ACSQ ALR G + H LK L D FV
Sbjct: 430 FASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVV 489
Query: 612 CSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHK 671
S+ DMY KCG LE + +F ++ + WN +I HG HG+G++A+ LF++ML G K
Sbjct: 490 TSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVK 549
Query: 672 PDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFK 731
PD TFV +L AC+H+GLV+ G F MQ + + P L+HY C+VDM GRAG+L+ A K
Sbjct: 550 PDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALK 609
Query: 732 LIIEMPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEK 791
I M + DA IW +LL +CR +G + +G+ ++ L E+EP+ +VL+SN+YA + K
Sbjct: 610 FIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGK 669
Query: 792 WDDVRMMRQRMKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQISK 851
W+ V +R +GL+K G S +E+ + F G+ HP +EE+ L+ ++
Sbjct: 670 WEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKM 729
Query: 852 IGYKPYTEAVLHELEEEEKVNILRGHSEKLAISFGLLKTTKDLTLRVCKNLRICVDCHNA 911
IGY P VL ++E++EK +IL HSE+LAI+F L+ T T+R+ KNLR+C DCH+
Sbjct: 730 IGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSV 789
Query: 912 AKLISKVAEREIVIRDNKRFHHFRDGVCSCGD 943
K ISK+ EREI++RD+ RFHHF++GVCSCGD
Sbjct: 790 TKFISKITEREIIVRDSNRFHHFKNGVCSCGD 821
Score = 294 bits (753), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 192/643 (29%), Positives = 341/643 (53%), Gaps = 29/643 (4%)
Query: 32 LQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELISAS 91
LQ I ++ E + AL +N + + + L + C +++ K +H + S
Sbjct: 24 LQSIGSVIREFSASANALQDCWKNGNESKEIDDVHTLFRYC---TNLQSAKCLHARLVVS 80
Query: 92 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSI 151
Q N I+ +L+ +Y G +R FD ++ R+++ WN ++SG+ + +V+
Sbjct: 81 KQIQN-VCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRC 139
Query: 152 FVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYG 211
F + + L PD TFP V+KAC + D G+ +H +A K G + DV+V+ +LI +Y
Sbjct: 140 FSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYS 196
Query: 212 KCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATV 271
+ V LF+ MP R++ SWN++I G ++G + E+ L + D TV
Sbjct: 197 RYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM------DSVTV 250
Query: 272 VTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNN 331
V++L C G+ + G+ +H ++K GL EL V+N L+D+YA+ G L + Q +FD+
Sbjct: 251 VSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYV 310
Query: 332 KNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLK 391
++++SWN+II A+ + L ++M++ ++P+ +T++++ + S+ ++ + +
Sbjct: 311 RDLISWNSIIKAYELNEQPLRAISLFQEMRL--SRIQPDCLTLISLASILSQLGDIRACR 368
Query: 392 ELHGYSLRHG-FDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQN 450
+ G++LR G F D + NA VV YAK G SA VF+ + + V SWN +I GYAQN
Sbjct: 369 SVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQN 428
Query: 451 GDHLKALD-YFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFT 509
G +A++ Y + ++ + + S++ AC+ +L +G ++HG +++NGL D F
Sbjct: 429 GFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV 488
Query: 510 GISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGV 569
SL +Y C + A LF ++ + V WNT+IA + + +A++LF+ M GV
Sbjct: 489 VTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGV 548
Query: 570 QPCEISIVSILSACSQLSALRLGKETHCYAL----KAILTNDAFVACSIIDMYAKCGCLE 625
+P I+ V++LSACS + G+ C+ + I + C ++DMY + G LE
Sbjct: 549 KPDHITFVTLLSACSHSGLVDEGQ--WCFEMMQTDYGITPSLKHYGC-MVDMYGRAGQLE 605
Query: 626 QSRRVFDRLK-DKDVTSWNAIIGGHGIHG---YGKEAIE-LFE 663
+ + + D + W A++ +HG GK A E LFE
Sbjct: 606 TALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFE 648
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 490 bits (1261), Expect = e-137, Method: Compositional matrix adjust.
Identities = 292/894 (32%), Positives = 490/894 (54%), Gaps = 24/894 (2%)
Query: 68 LLQACGHEKDIEI--GKRVHELISASTQFSNDFIINTRLITMYSLC----GFPLDSRRVF 121
+L+AC + I G+++H L+ ++ D +++ LI+MY C G+ L + F
Sbjct: 108 VLRACQEIGSVGILFGRQIHGLM-FKLSYAVDAVVSNVLISMYWKCIGSVGYALCA---F 163
Query: 122 DSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIA-- 179
++ +N WN+++S +++ IF + D +P +TF ++ +
Sbjct: 164 GDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS-RPTEYTFGSLVTTACSLTEP 222
Query: 180 DVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 239
DV + K GL+ D+FV + L++ + K + K+F M RN V+ N ++
Sbjct: 223 DVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMV 282
Query: 240 GSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLP--VCAGEGNVDLGILVHGLAVKL 297
G + E+ L + M + +++ P A E + G VHG +
Sbjct: 283 GLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITT 342
Query: 298 GLTRELM-VNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDL 356
GL ++ + N LV+MYAKCG +++A+ +F +K+ VSWN++I G C +
Sbjct: 343 GLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNG--CFIEAV 400
Query: 357 LRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAY 416
R M+ ++ P T+++ L+SC+ +++HG SL+ G D + V+NA + Y
Sbjct: 401 ERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLY 460
Query: 417 AKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHL-KALDYFLQMTHSDLEPDLFSI 475
A+ G +F M SWN++I A++ L +A+ FL + + + +
Sbjct: 461 AETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITF 520
Query: 476 GSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEM-E 534
S++ A + L GK+IHG ++N + ++ T +L++ Y C + +F M E
Sbjct: 521 SSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAE 580
Query: 535 DKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKE 594
+ V+WN+MI+GY N+L +A+ L M G + ++LSA + ++ L G E
Sbjct: 581 RRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGME 640
Query: 595 THCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGY 654
H +++A L +D V +++DMY+KCG L+ + R F+ + ++ SWN++I G+ HG
Sbjct: 641 VHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQ 700
Query: 655 GKEAIELFEKMLALGH-KPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHY 713
G+EA++LFE M G PD TFVG+L AC+HAGL+E G K+F M + + P++EH+
Sbjct: 701 GEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHF 760
Query: 714 ACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSC-RTYG-ALKMGEKVAKTLLEL 771
+C+ D+LGRAG+LD I +MP + + IW ++L +C R G ++G+K A+ L +L
Sbjct: 761 SCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQL 820
Query: 772 EPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGCSWIELGGNIHSFVVGDNM 831
EP+ A NYVL+ N+YA +W+D+ R++MK+ ++KEAG SW+ + +H FV GD
Sbjct: 821 EPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKS 880
Query: 832 HPEWEEIRGMWGRLEEQISKIGYKPYTEAVLHELEEEEKVNILRGHSEKLAISFGL-LKT 890
HP+ + I L ++ GY P T L++LE+E K IL HSEKLA++F L +
Sbjct: 881 HPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQR 940
Query: 891 TKDLTLRVCKNLRICVDCHNAAKLISKVAEREIVIRDNKRFHHFRDGVCSCGDI 944
+ L +R+ KNLR+C DCH+A K ISK+ R+I++RD+ RFHHF+DG CSC D
Sbjct: 941 SSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDF 994
Score = 241 bits (614), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 201/699 (28%), Positives = 336/699 (48%), Gaps = 32/699 (4%)
Query: 93 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIF 152
+ D + LI Y G + +R+VFD + RN W +VSG+++N + + L +F
Sbjct: 31 RLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEAL-VF 89
Query: 153 VELLSDTELKPDNFTFPCVIKACGGIADVS--FGSGVHGMAAKMGLIGDVFVSNALIAMY 210
+ + + + + F V++AC I V FG +HG+ K+ D VSN LI+MY
Sbjct: 90 LRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMY 149
Query: 211 GKC-AFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVA 269
KC V + F + +N VSWNSII S+ G +F + M +G P
Sbjct: 150 WKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQ--YDGSRPTEY 207
Query: 270 TVVTVLPVCAGEGNVDLGILVHGLAV--KLGLTRELMVNNALVDMYAKCGFLSEAQILFD 327
T +++ D+ +L + K GL +L V + LV +AK G LS A+ +F+
Sbjct: 208 TFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFN 267
Query: 328 KNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLT--SCSEKS 385
+ +N V+ N ++ L M + + V +L+ S +E+
Sbjct: 268 QMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEV 327
Query: 386 ELLSLKELHGYSLRHGF-DNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALI 444
L +E+HG+ + G D + N V YAKCGS A VF+ M + SWN++I
Sbjct: 328 GLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMI 387
Query: 445 CGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLE 504
G QNG ++A++ + M D+ P F++ S + +C LK G++IHG ++ G++
Sbjct: 388 TGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGID 447
Query: 505 GDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGY--SQNKLPVEAIVLFR 562
+ +L++LY + R +F M + VSWN++I S+ LP EA+V F
Sbjct: 448 LNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLP-EAVVCFL 506
Query: 563 RMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCG 622
G + I+ S+LSA S LS LGK+ H ALK + ++A ++I Y KCG
Sbjct: 507 NAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCG 566
Query: 623 CLEQSRRVFDRLKD-KDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGIL 681
++ ++F R+ + +D +WN++I G+ + +A++L ML G + D+F + +L
Sbjct: 567 EMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVL 626
Query: 682 MACNHAGLVENGLKYFSQMQKLHA--VKPKLEHYACV----VDMLGRAGKLDDAFKLIIE 735
A +E G+ ++HA V+ LE V VDM + G+LD A +
Sbjct: 627 SAFASVATLERGM-------EVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNT 679
Query: 736 MPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPD 774
MP ++ W+S++ +G GE+ K ++ D
Sbjct: 680 MPVR-NSYSWNSMISGYARHG---QGEEALKLFETMKLD 714
Score = 224 bits (572), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 181/578 (31%), Positives = 279/578 (48%), Gaps = 26/578 (4%)
Query: 188 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFS 247
H K L DV++ N LI Y + K+F+ MP RN VSW I+ G S NG
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 248 CESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDL--GILVHGLAVKLGLTRELMV 305
E+ L M+ +EG + V+VL C G+V + G +HGL KL + +V
Sbjct: 84 KEALVFLRDMV--KEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVV 141
Query: 306 NNALVDMYAKC-GFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKE 364
+N L+ MY KC G + A F KN VSWN+II +S AGD F + MQ
Sbjct: 142 SNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY-- 199
Query: 365 EEMKPNEVTVLN-VLTSCS-EKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSE 422
+ +P E T + V T+CS + ++ L+++ + G D V + V A+AK GS
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 423 ISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHS-DLEPDLFSIGSLILA 481
A VF+ M++R + N L+ G + +A F+ M D+ P+ + I
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFP 319
Query: 482 CTHLK---SLHRGKEIHGFVIRNGLEGDSFTGI--SLLSLYMHCEKSSSARVLFDEMEDK 536
L L +G+E+HG VI GL D GI L+++Y C + AR +F M DK
Sbjct: 320 EYSLAEEVGLKKGREVHGHVITTGLV-DFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK 378
Query: 537 SLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETH 596
VSWN+MI G QN +EA+ ++ M + P +++S LS+C+ L +LG++ H
Sbjct: 379 DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIH 438
Query: 597 CYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYG- 655
+LK + + V+ +++ +YA+ G L + R++F + + D SWN+IIG
Sbjct: 439 GESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSL 498
Query: 656 KEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYAC 715
EA+ F G K + TF +L A + E G Q+ L A+K + A
Sbjct: 499 PEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG----KQIHGL-ALKNNIADEAT 553
Query: 716 VVDML----GRAGKLDDAFKLIIEMPEEADAGIWSSLL 749
+ L G+ G++D K+ M E D W+S++
Sbjct: 554 TENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI 591
Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 151/310 (48%), Gaps = 27/310 (8%)
Query: 489 HRG--KEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIA 546
HRG + H + +N L+ D + +L++ Y+ S SAR +FDEM ++ VSW +++
Sbjct: 16 HRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVS 75
Query: 547 GYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRL--GKETHCYALKAIL 604
GYS+N EA+V R M G+ + + VS+L AC ++ ++ + G++ H K
Sbjct: 76 GYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSY 135
Query: 605 TNDAFVACSIIDMYAKC-GCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFE 663
DA V+ +I MY KC G + + F ++ K+ SWN+II + G + A +F
Sbjct: 136 AVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFS 195
Query: 664 KMLALGHKPDTFTFVGIL-MACNHAGLVENGLKYFSQMQ---KLHAVKPKLEHYACVVDM 719
M G +P +TF ++ AC+ L E ++ Q+ + + L + +V
Sbjct: 196 SMQYDGSRPTEYTFGSLVTTACS---LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSA 252
Query: 720 LGRAGKLDDAFKLIIEMPEEADA----GIWSSLLRSCRTYGALKMGEKVAKTLLELEP-- 773
++G L A K+ +M E +A G+ L+R K GE+ K +++
Sbjct: 253 FAKSGSLSYARKVFNQM-ETRNAVTLNGLMVGLVRQ-------KWGEEATKLFMDMNSMI 304
Query: 774 -DKAENYVLV 782
E+YV++
Sbjct: 305 DVSPESYVIL 314
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 483 bits (1242), Expect = e-135, Method: Compositional matrix adjust.
Identities = 269/789 (34%), Positives = 441/789 (55%), Gaps = 8/789 (1%)
Query: 156 LSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMA-AKMGLIGDVFVSNALIAMYGKCA 214
+ + + D F +++ C GS V+ +A + M +G V + NA +AM+ +
Sbjct: 85 MQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLG-VELGNAFLAMFVRFG 143
Query: 215 FVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTV 274
+ + +F M ERNL SWN ++ G ++ G+ E+ L +M+ G PDV T V
Sbjct: 144 NLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG-GVKPDVYTFPCV 202
Query: 275 LPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNV 334
L C G ++ G VH V+ G ++ V NAL+ MY KCG + A++LFD+ +++
Sbjct: 203 LRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDI 262
Query: 335 VSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELH 394
+SWN +I + G +L M+ + P+ +T+ +V+++C + +++H
Sbjct: 263 ISWNAMISGYFENGMCHEGLELF--FAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIH 320
Query: 395 GYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHL 454
Y + GF D V N+ Y GS AE +F M+ + + SW +I GY N
Sbjct: 321 AYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPD 380
Query: 455 KALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLL 514
KA+D + M ++PD ++ +++ AC L L G E+H I+ L +L+
Sbjct: 381 KAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLI 440
Query: 515 SLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEI 574
++Y C+ A +F + K+++SW ++IAG N EA++ R+M + +QP I
Sbjct: 441 NMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAI 499
Query: 575 SIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRL 634
++ + L+AC+++ AL GKE H + L+ + D F+ +++DMY +CG + + F+
Sbjct: 500 TLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ 559
Query: 635 KDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGL 694
K KDVTSWN ++ G+ G G +ELF++M+ +PD TF+ +L C+ + +V GL
Sbjct: 560 K-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGL 618
Query: 695 KYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRT 754
YFS+M+ + V P L+HYACVVD+LGRAG+L +A K I +MP D +W +LL +CR
Sbjct: 619 MYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRI 677
Query: 755 YGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGCS 814
+ + +GE A+ + EL+ Y+L+ N+YA KW +V +R+ MKE GL +AGCS
Sbjct: 678 HHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCS 737
Query: 815 WIELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQISKIGYKPYTEAVLHELEEEEKVNIL 874
W+E+ G +H+F+ D HP+ +EI + E++S++G +E+ + E + I
Sbjct: 738 WVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIF 797
Query: 875 RGHSEKLAISFGLLKTTKDLTLRVCKNLRICVDCHNAAKLISKVAEREIVIRDNKRFHHF 934
GHSE+ AI+FGL+ T + + V KNL +C +CH+ K ISK REI +RD + FHHF
Sbjct: 798 CGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHF 857
Query: 935 RDGVCSCGD 943
+DG CSCGD
Sbjct: 858 KDGECSCGD 866
Score = 299 bits (765), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 192/626 (30%), Positives = 321/626 (51%), Gaps = 19/626 (3%)
Query: 34 EITTLCEESKSLNKALSLLQ--ENLHNADLKEATGVLLQACGHEKDIEIGKRVHELISAS 91
++ LC K L +A+ LL + L A ++ L++ C ++ E G +V+ I+ S
Sbjct: 65 QLHGLCANGK-LEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYS-IALS 122
Query: 92 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSI 151
+ S + + M+ G +D+ VF + RNLF WN LV G+ K + + + +
Sbjct: 123 SMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCL 182
Query: 152 FVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYG 211
+ +L +KPD +TFPCV++ CGGI D++ G VH + G D+ V NALI MY
Sbjct: 183 YHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYV 242
Query: 212 KCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATV 271
KC V+ LF+ MP R+++SWN++I G ENG E +L M G PD+ T+
Sbjct: 243 KCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVD--PDLMTL 300
Query: 272 VTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNN 331
+V+ C G+ LG +H + G ++ V N+L MY G EA+ LF +
Sbjct: 301 TSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER 360
Query: 332 KNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLK 391
K++VSW T+I + D R M ++ +KP+E+TV VL++C+ +L +
Sbjct: 361 KDIVSWTTMISGYEYNFLPDKAIDTYR--MMDQDSVKPDEITVAAVLSACATLGDLDTGV 418
Query: 392 ELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNG 451
ELH +++ + +VAN + Y+KC A ++FH + + V SW ++I G N
Sbjct: 419 ELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNN 478
Query: 452 DHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGI 511
+AL + QM + L+P+ ++ + + AC + +L GKEIH V+R G+ D F
Sbjct: 479 RCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPN 537
Query: 512 SLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQP 571
+LL +Y+ C + ++A F+ + K + SWN ++ GYS+ + LF RM V+P
Sbjct: 538 ALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRP 596
Query: 572 CEISIVSILSACSQLSALRLG----KETHCYALKAILTNDAFVACSIIDMYAKCGCLEQS 627
EI+ +S+L CS+ +R G + Y + N AC ++D+ + G L+++
Sbjct: 597 DEITFISLLCGCSKSQMVRQGLMYFSKMEDY---GVTPNLKHYAC-VVDLLGRAGELQEA 652
Query: 628 RRVFDRLK-DKDVTSWNAIIGGHGIH 652
+ ++ D W A++ IH
Sbjct: 653 HKFIQKMPVTPDPAVWGALLNACRIH 678
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 480 bits (1235), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/678 (36%), Positives = 390/678 (57%), Gaps = 4/678 (0%)
Query: 266 PDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQIL 325
P+ +T + +G + G ++HG AV G EL++ + +V MY K + +A+ +
Sbjct: 117 PNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKV 176
Query: 326 FDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKS 385
FD+ K+ + WNT+I + + + R + + E + + T+L++L + +E
Sbjct: 177 FDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL-INESCTRLDTTTLLDILPAVAELQ 235
Query: 386 ELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALIC 445
EL ++H + + G + + V F+ Y+KCG +F + ++NA+I
Sbjct: 236 ELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIH 295
Query: 446 GYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEG 505
GY NG+ +L F ++ S ++ SL+ HL ++ IHG+ +++
Sbjct: 296 GYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSNFLS 352
Query: 506 DSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMF 565
+ +L ++Y + SAR LFDE +KSL SWN MI+GY+QN L +AI LFR M
Sbjct: 353 HASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ 412
Query: 566 SIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLE 625
P ++I ILSAC+QL AL LGK H + +V+ ++I MYAKCG +
Sbjct: 413 KSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIA 472
Query: 626 QSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACN 685
++RR+FD + K+ +WN +I G+G+HG G+EA+ +F +ML G P TF+ +L AC+
Sbjct: 473 EARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACS 532
Query: 686 HAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIW 745
HAGLV+ G + F+ M + +P ++HYAC+VD+LGRAG L A + I M E + +W
Sbjct: 533 HAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVW 592
Query: 746 SSLLRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKER 805
+LL +CR + + V++ L EL+PD +VL+SNI++ + +RQ K+R
Sbjct: 593 ETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKR 652
Query: 806 GLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQISKIGYKPYTEAVLHEL 865
L K G + IE+G H F GD HP+ +EI +LE ++ + GY+P TE LH++
Sbjct: 653 KLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDV 712
Query: 866 EEEEKVNILRGHSEKLAISFGLLKTTKDLTLRVCKNLRICVDCHNAAKLISKVAEREIVI 925
EEEE+ +++ HSE+LAI+FGL+ T +R+ KNLR+C+DCH KLISK+ ER IV+
Sbjct: 713 EEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVV 772
Query: 926 RDNKRFHHFRDGVCSCGD 943
RD RFHHF+DGVCSCGD
Sbjct: 773 RDANRFHHFKDGVCSCGD 790
Score = 262 bits (670), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 164/590 (27%), Positives = 289/590 (48%), Gaps = 18/590 (3%)
Query: 94 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFV 153
F ND + T+L S G +R +F S++ ++F +N L+ GF+ NE LS+F
Sbjct: 48 FRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFA 107
Query: 154 ELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 213
L T+LKP++ T+ I A G D G +HG A G ++ + + ++ MY K
Sbjct: 108 HLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKF 167
Query: 214 AFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVT 273
VE+ K+F+ MPE++ + WN++I G +N ES + ++ E D T++
Sbjct: 168 WRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLIN-ESCTRLDTTTLLD 226
Query: 274 VLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKN 333
+LP A + LG+ +H LA K G V + +Y+KCG + LF + +
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPD 286
Query: 334 VVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKEL 393
+V++N +I ++ G+ + L +++ + ++ + + L ++ L+ + +
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVS-----GHLMLIYAI 341
Query: 394 HGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDH 453
HGY L+ F + V+ A Y+K SA +F +++ SWNA+I GY QNG
Sbjct: 342 HGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLT 401
Query: 454 LKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISL 513
A+ F +M S+ P+ +I ++ AC L +L GK +H V E + +L
Sbjct: 402 EDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTAL 461
Query: 514 LSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCE 573
+ +Y C + AR LFD M K+ V+WNTMI+GY + EA+ +F M + G+ P
Sbjct: 462 IGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTP 521
Query: 574 ISIVSILSACSQLSALRLGKE-----THCYALKAILTNDAFVACSIIDMYAKCGCLEQSR 628
++ + +L ACS ++ G E H Y + + + AC ++D+ + G L+++
Sbjct: 522 VTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKH---YAC-MVDILGRAGHLQRAL 577
Query: 629 RVFDRLKDKDVTS-WNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTF 677
+ + + + +S W ++G IH A + EK+ L PD +
Sbjct: 578 QFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFEL--DPDNVGY 625
Score = 159 bits (403), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 171/338 (50%), Gaps = 12/338 (3%)
Query: 68 LLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 127
+L A +++ +G ++H L + + +S+D+++ T I++YS CG +F +
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVL-TGFISLYSKCGKIKMGSALFREFRKP 285
Query: 128 NLFQWNALVSGFTKNELYPDVLSIFVEL-LSDTELKPDNFTFPCVIKACGGIADVSFGSG 186
++ +NA++ G+T N LS+F EL LS L+ T ++ G + +
Sbjct: 286 DIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSS--TLVSLVPVSGHLMLI---YA 340
Query: 187 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGF 246
+HG K + VS AL +Y K +E KLF+ PE++L SWN++I G ++NG
Sbjct: 341 IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGL 400
Query: 247 SCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVN 306
+ ++ L +M E F P+ T+ +L CA G + LG VH L + V+
Sbjct: 401 TEDAISLFREMQKSE--FSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVS 458
Query: 307 NALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEE 366
AL+ MYAKCG ++EA+ LFD KN V+WNT+I + + G ++ +M
Sbjct: 459 TALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIF--YEMLNSG 516
Query: 367 MKPNEVTVLNVLTSCSEKSELLSLKELHGYSL-RHGFD 403
+ P VT L VL +CS + E+ + R+GF+
Sbjct: 517 ITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFE 554
Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 3/160 (1%)
Query: 68 LLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 127
+L AC + +GK VH+L+ ST F + ++T LI MY+ CG ++RR+FD + +
Sbjct: 426 ILSACAQLGALSLGKWVHDLVR-STDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK 484
Query: 128 NLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGV 187
N WN ++SG+ + + L+IF E+L ++ + P TF CV+ AC V G +
Sbjct: 485 NEVTWNTMISGYGLHGQGQEALNIFYEML-NSGITPTPVTFLCVLYACSHAGLVKEGDEI 543
Query: 188 -HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM 226
+ M + G V ++ + G+ ++ ++ E M
Sbjct: 544 FNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAM 583
Score = 33.9 bits (76), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 42/226 (18%), Positives = 96/226 (42%), Gaps = 17/226 (7%)
Query: 594 ETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHG 653
+TH + ND + + + G + +R +F ++ DV +N ++ G ++
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 654 YGKEAIELFEKML-ALGHKPDTFTFVGILMAC-----NHAGLVENGLKYFSQMQKLHAVK 707
++ +F + + KP++ T+ + A + AG V +G +
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHG------QAVVDGCD 151
Query: 708 PKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYGALKMGEKVAKT 767
+L + +V M + +++DA K+ MPE+ D +W++++ R +V +
Sbjct: 152 SELLLGSNIVKMYFKFWRVEDARKVFDRMPEK-DTILWNTMISGYRKNEMYVESIQVFRD 210
Query: 768 LLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGC 813
L+ + + L+ + A +E ++ +R M+ L + GC
Sbjct: 211 LINESCTRLDTTTLLDILPAVAE----LQELRLGMQIHSLATKTGC 252
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 479 bits (1234), Expect = e-134, Method: Compositional matrix adjust.
Identities = 259/688 (37%), Positives = 408/688 (59%), Gaps = 11/688 (1%)
Query: 265 IPDV-ATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQ 323
IP+ +V++L VC +G D G VH +K G L+ +N L+DMY KC A
Sbjct: 2 IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61
Query: 324 ILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSE 383
+FD +NVVSW+ ++ + GD+ G+ L +M + + PNE T L +C
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFS--EMGRQGIYPNEFTFSTNLKACGL 119
Query: 384 KSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNAL 443
+ L ++HG+ L+ GF+ V N+ V Y+KCG AE VF + R++ SWNA+
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 179
Query: 444 ICGYAQNGDHLKALDYFLQMTHSDLE--PDLFSIGSLILACTHLKSLHRGKEIHGFVIRN 501
I G+ G KALD F M ++++ PD F++ SL+ AC+ ++ GK+IHGF++R+
Sbjct: 180 IAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS 239
Query: 502 GLEGDSFTGI--SLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIV 559
G S I SL+ LY+ C SAR FD++++K+++SW+++I GY+Q VEA+
Sbjct: 240 GFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMG 299
Query: 560 LFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYA 619
LF+R+ + Q ++ SI+ + + LR GK+ A+K + V S++DMY
Sbjct: 300 LFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYL 359
Query: 620 KCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVG 679
KCG ++++ + F ++ KDV SW +I G+G HG GK+++ +F +ML +PD ++
Sbjct: 360 KCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLA 419
Query: 680 ILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEE 739
+L AC+H+G+++ G + FS++ + H +KP++EHYACVVD+LGRAG+L +A LI MP +
Sbjct: 420 VLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIK 479
Query: 740 ADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDVRMMR 799
+ GIW +LL CR +G +++G++V K LL ++ NYV++SN+Y + W++ R
Sbjct: 480 PNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNAR 539
Query: 800 QRMKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQI-SKIGYKPYT 858
+ +GL+KEAG SW+E+ +H F G++ HP I+ E ++ ++GY
Sbjct: 540 ELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGL 599
Query: 859 EAVLHELEEEEKVNILRGHSEKLAISFGLLK---TTKDLTLRVCKNLRICVDCHNAAKLI 915
+ LH++++E K LR HSEKLAI L K T+RV KNLR+CVDCH K +
Sbjct: 600 KHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGL 659
Query: 916 SKVAEREIVIRDNKRFHHFRDGVCSCGD 943
SK+ + V+RD RFH F DG CSCGD
Sbjct: 660 SKITKIAYVVRDAVRFHSFEDGCCSCGD 687
Score = 237 bits (605), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 146/492 (29%), Positives = 259/492 (52%), Gaps = 16/492 (3%)
Query: 171 VIKACG--GIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 228
+++ C G++D G VH K G ++ SN LI MY KC K+F+ MPE
Sbjct: 12 ILRVCTRKGLSDQ--GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE 69
Query: 229 RNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGI 288
RN+VSW++++ G NG S L +M +G P+ T T L C ++ G+
Sbjct: 70 RNVVSWSALMSGHVLNGDLKGSLSLFSEM--GRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 289 LVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAG 348
+HG +K+G + V N+LVDMY+KCG ++EA+ +F + +++++SWN +I F AG
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 349 DVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGF--DNDE 406
D MQ + +P+E T+ ++L +CS + + K++HG+ +R GF +
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 407 LVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHS 466
+ + V Y KCG SA F + +T+ SW++LI GYAQ G+ ++A+ F ++
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 307
Query: 467 DLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIR--NGLEGDSFTGISLLSLYMHCEKSS 524
+ + D F++ S+I L +GK++ ++ +GLE S++ +Y+ C
Sbjct: 308 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLN--SVVDMYLKCGLVD 365
Query: 525 SARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACS 584
A F EM+ K ++SW +I GY ++ L +++ +F M ++P E+ +++LSACS
Sbjct: 366 EAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACS 425
Query: 585 QLSALRLGKETHCYALK--AILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDK-DVTS 641
++ G+E L+ I AC ++D+ + G L++++ + D + K +V
Sbjct: 426 HSGMIKEGEELFSKLLETHGIKPRVEHYAC-VVDLLGRAGRLKEAKHLIDTMPIKPNVGI 484
Query: 642 WNAIIGGHGIHG 653
W ++ +HG
Sbjct: 485 WQTLLSLCRVHG 496
Score = 205 bits (522), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 239/483 (49%), Gaps = 8/483 (1%)
Query: 68 LLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 127
+L+ C + + G +VH + S N I + LI MY C PL + +VFDS+ R
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLN-LITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 128 NLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGV 187
N+ W+AL+SG N LS+F E+ + P+ FTF +KACG + + G +
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEM-GRQGIYPNEFTFSTNLKACGLLNALEKGLQI 129
Query: 188 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFS 247
HG K+G V V N+L+ MY KC + E K+F + +R+L+SWN++I G G+
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYG 189
Query: 248 CESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGL--TRELMV 305
++ D M PD T+ ++L C+ G + G +HG V+ G +
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249
Query: 306 NNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEE 365
+LVD+Y KCG+L A+ FD+ K ++SW+++I ++ G+ L +++Q E
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ--EL 307
Query: 366 EMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISA 425
+ + + +++ ++ + L K++ +++ + V N+ V Y KCG A
Sbjct: 308 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEA 367
Query: 426 ENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHL 485
E F M + V SW +I GY ++G K++ F +M ++EPD +++ AC+H
Sbjct: 368 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 427
Query: 486 KSLHRGKEIHGFVIR-NGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVS-WNT 543
+ G+E+ ++ +G++ ++ L + A+ L D M K V W T
Sbjct: 428 GMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQT 487
Query: 544 MIA 546
+++
Sbjct: 488 LLS 490
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 144/312 (46%), Gaps = 6/312 (1%)
Query: 42 SKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHE-LISASTQFSNDFII 100
SK+L+ + + N+ + LL+AC I GK++H L+ + + I
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249
Query: 101 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTE 160
L+ +Y CG+ +R+ FD +K + + W++L+ G+ + + + + +F + L +
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLF-KRLQELN 308
Query: 161 LKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 220
+ D+F +I A + G + +A K+ + V N+++ MY KC V+E
Sbjct: 309 SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAE 368
Query: 221 KLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAG 280
K F M ++++SW +I G ++G +S + +M+ PD + VL C+
Sbjct: 369 KCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEML--RHNIEPDEVCYLAVLSACSH 426
Query: 281 EGNVDLG-ILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNK-NVVSWN 338
G + G L L G+ + +VD+ + G L EA+ L D K NV W
Sbjct: 427 SGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQ 486
Query: 339 TIIGAFSMAGDV 350
T++ + GD+
Sbjct: 487 TLLSLCRVHGDI 498
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 477 bits (1228), Expect = e-133, Method: Compositional matrix adjust.
Identities = 268/818 (32%), Positives = 444/818 (54%), Gaps = 33/818 (4%)
Query: 78 IEIGKRVHELISASTQFS----NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWN 133
+++ + +SAS F D + ++I YS + F+ + R++ WN
Sbjct: 90 LQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWN 149
Query: 134 ALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAK 193
+++SG+ +N + +FV++ + ++ D TF ++K C + D S G +HG+ +
Sbjct: 150 SMLSGYLQNGESLKSIEVFVDMGREG-IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVR 208
Query: 194 MGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDL 253
+G DV ++AL+ MY K E +++F+ +PE+N VSW++II G +N +
Sbjct: 209 VGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKF 268
Query: 254 LIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMY 313
+M G + +VL CA + LG +H A+K + +V A +DMY
Sbjct: 269 FKEMQKVNAGVSQSI--YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMY 326
Query: 314 AKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVT 373
AKC + +AQILFD + N N S+N +I +S + G LL ++ + +E++
Sbjct: 327 AKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ--EEHGFKALLLFHRLMSSGLGFDEIS 384
Query: 374 VLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMD 433
+ V +C+ L +++G +++ D VANA + Y KC + A VF M
Sbjct: 385 LSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR 444
Query: 434 SRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKE 493
R SWNA+I + QNG + L F+ M S +EPD F+ GS++ ACT SL G E
Sbjct: 445 RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGME 503
Query: 494 IHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVL----------------FDEMEDKS 537
IH ++++G+ +S G SL+ +Y C A + ++M +K
Sbjct: 504 IHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKR 563
Query: 538 L----VSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGK 593
L VSWN++I+GY + +A +LF RM +G+ P + + ++L C+ L++ LGK
Sbjct: 564 LQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGK 623
Query: 594 ETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHG 653
+ H +K L +D ++ +++DMY+KCG L SR +F++ +D +WNA+I G+ HG
Sbjct: 624 QIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHG 683
Query: 654 YGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHY 713
G+EAI+LFE+M+ KP+ TF+ IL AC H GL++ GL+YF M++ + + P+L HY
Sbjct: 684 KGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHY 743
Query: 714 ACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTY-GALKMGEKVAKTLLELE 772
+ +VD+LG++GK+ A +LI EMP EAD IW +LL C + +++ E+ LL L+
Sbjct: 744 SNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLD 803
Query: 773 PDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGCSWIELGGNIHSFVVGDNMH 832
P + Y L+SN+YA + W+ V +R+ M+ L+KE GCSW+EL +H F+VGD H
Sbjct: 804 PQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAH 863
Query: 833 PEWEEIRGMWGRLEEQISKIGYKPYTEAVLHELEEEEK 870
P WEEI G + ++ + V E+EEE++
Sbjct: 864 PRWEEIYEELGLIYSEMKPFDDSSFVRGV--EVEEEDQ 899
Score = 220 bits (561), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 167/607 (27%), Positives = 277/607 (45%), Gaps = 53/607 (8%)
Query: 264 FIPDVATVVT-----VLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGF 318
F+ V +V T V CA +G ++LG H + G V N L+ +Y
Sbjct: 39 FLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRD 98
Query: 319 LSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKE-------------- 364
A ++FDK ++VVSWN +I +S + D+ M +++
Sbjct: 99 FVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQN 158
Query: 365 -EEMKPNEV--------------TVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVA 409
E +K EV T +L CS + ++HG +R G D D + A
Sbjct: 159 GESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAA 218
Query: 410 NAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLE 469
+A + YAK + + VF G+ + SW+A+I G QN AL +F +M +
Sbjct: 219 SALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAG 278
Query: 470 PDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVL 529
S++ +C L L G ++H +++ D + L +Y C+ A++L
Sbjct: 279 VSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQIL 338
Query: 530 FDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSAL 589
FD E+ + S+N MI GYSQ + +A++LF R+ S G+ EIS+ + AC+ + L
Sbjct: 339 FDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGL 398
Query: 590 RLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGH 649
G + + A+K+ L+ D VA + IDMY KC L ++ RVFD ++ +D SWNAII H
Sbjct: 399 SEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAH 458
Query: 650 GIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPK 709
+G G E + LF ML +PD FTF IL AC G + G++ S + K +
Sbjct: 459 EQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVK-SGMASN 516
Query: 710 LEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLL 769
++DM + G +++A K I S + G ++ EK+ L
Sbjct: 517 SSVGCSLIDMYSKCGMIEEAEK------------IHSRFFQRANVSGTMEELEKMHNKRL 564
Query: 770 ELEPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGL--QKEAGCSWIELGGNIHSFVV 827
+ + ++ + + Y E+ +D +M+ RM E G+ K + ++ N+ S +
Sbjct: 565 Q---EMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGL 621
Query: 828 GDNMHPE 834
G +H +
Sbjct: 622 GKQIHAQ 628
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 474 bits (1221), Expect = e-132, Method: Compositional matrix adjust.
Identities = 249/744 (33%), Positives = 409/744 (54%), Gaps = 5/744 (0%)
Query: 203 SNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEE 262
+N +I+ + K V LF+ MP+R +V+W ++ + N E+F L +M
Sbjct: 82 TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSS 141
Query: 263 GFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRE--LMVNNALVDMYAKCGFLS 320
+PD T T+LP C + VH AVKLG L V+N L+ Y + L
Sbjct: 142 CTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLD 201
Query: 321 EAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTS 380
A +LF++ K+ V++NT+I + G + L ++M++ +P++ T VL +
Sbjct: 202 LACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLF--LKMRQSGHQPSDFTFSGVLKA 259
Query: 381 CSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSW 440
+ ++LH S+ GF D V N + Y+K + +F M S+
Sbjct: 260 VVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSY 319
Query: 441 NALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIR 500
N +I Y+Q + +L +F +M + F +++ +L SL G+++H +
Sbjct: 320 NVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALL 379
Query: 501 NGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVL 560
+ G SL+ +Y CE A ++F + ++ VSW +I+GY Q L + L
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKL 439
Query: 561 FRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAK 620
F +M ++ + + ++L A + ++L LGK+ H + +++ + F ++DMYAK
Sbjct: 440 FTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAK 499
Query: 621 CGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGI 680
CG ++ + +VF+ + D++ SWNA+I H +G G+ AI F KM+ G +PD+ + +G+
Sbjct: 500 CGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGV 559
Query: 681 LMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEA 740
L AC+H G VE G +YF M ++ + PK +HYAC++D+LGR G+ +A KL+ EMP E
Sbjct: 560 LTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEP 619
Query: 741 DAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDK-AENYVLVSNIYAGSEKWDDVRMMR 799
D +WSS+L +CR + + E+ A+ L +E + A YV +SNIYA + +W+ VR ++
Sbjct: 620 DEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVK 679
Query: 800 QRMKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQISKIGYKPYTE 859
+ M+ERG++K SW+E+ IH F D HP +EI L +I + GYKP T
Sbjct: 680 KAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTS 739
Query: 860 AVLHELEEEEKVNILRGHSEKLAISFGLLKTTKDLTLRVCKNLRICVDCHNAAKLISKVA 919
+V+ +++E+ K+ L+ HSE+LA++F L+ T + + V KNLR C DCH A KLISK+
Sbjct: 740 SVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIV 799
Query: 920 EREIVIRDNKRFHHFRDGVCSCGD 943
+REI +RD RFHHF +GVCSCGD
Sbjct: 800 KREITVRDTSRFHHFSEGVCSCGD 823
Score = 250 bits (638), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 161/570 (28%), Positives = 276/570 (48%), Gaps = 11/570 (1%)
Query: 117 SRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELK-PDNFTFPCVIKAC 175
+R +FD++ R + W L+ + +N + + +F ++ + PD+ TF ++ C
Sbjct: 98 ARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGC 157
Query: 176 GGIADVSFGSGVHGMAAKMGLIGDVF--VSNALIAMYGKCAFVEEMVKLFEVMPERNLVS 233
+ VH A K+G + F VSN L+ Y + ++ LFE +PE++ V+
Sbjct: 158 NDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVT 217
Query: 234 WNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGL 293
+N++I G ++G ES L +KM + G P T VL G + LG +H L
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMR--QSGHQPSDFTFSGVLKAVVGLHDFALGQQLHAL 275
Query: 294 AVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGT 353
+V G +R+ V N ++D Y+K + E ++LFD+ + VS+N +I ++S A +
Sbjct: 276 SVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEAS 335
Query: 354 FDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFV 413
R+MQ + + +L+ + S L ++LH +L D+ V N+ V
Sbjct: 336 LHFFREMQCMGFDRR--NFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLV 393
Query: 414 VAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLF 473
YAKC AE +F + RT SW ALI GY Q G H L F +M S+L D
Sbjct: 394 DMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQS 453
Query: 474 SIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEM 533
+ +++ A SL GK++H F+IR+G + F+G L+ +Y C A +F+EM
Sbjct: 454 TFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEM 513
Query: 534 EDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGK 593
D++ VSWN +I+ ++ N AI F +M G+QP +SI+ +L+ACS + G
Sbjct: 514 PDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGT 573
Query: 594 E--THCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLK-DKDVTSWNAIIGGHG 650
E + I AC ++D+ + G ++ ++ D + + D W++++
Sbjct: 574 EYFQAMSPIYGITPKKKHYAC-MLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACR 632
Query: 651 IHGYGKEAIELFEKMLALGHKPDTFTFVGI 680
IH A EK+ ++ D +V +
Sbjct: 633 IHKNQSLAERAAEKLFSMEKLRDAAAYVSM 662
Score = 189 bits (481), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 133/497 (26%), Positives = 234/497 (47%), Gaps = 53/497 (10%)
Query: 295 VKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTF 354
+K G + +N +V+ + G +S A+ ++D+ +KN VS NT+I GDV
Sbjct: 40 IKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSAR 99
Query: 355 DLLRKMQMK------------------EEEMK-------------PNEVTVLNVLTSCSE 383
DL M + +E K P+ VT +L C++
Sbjct: 100 DLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCND 159
Query: 384 KSELLSLKELHGYSLRHGFDNDEL--VANAFVVAYAKCGSEISAENVFHGMDSRTVSSWN 441
++ ++H ++++ GFD + V+N + +Y + A +F + + ++N
Sbjct: 160 AVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFN 219
Query: 442 ALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRN 501
LI GY ++G + +++ FL+M S +P F+ ++ A L G+++H +
Sbjct: 220 TLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTT 279
Query: 502 GLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLF 561
G D+ G +L Y ++ R+LFDEM + VS+N +I+ YSQ ++ F
Sbjct: 280 GFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFF 339
Query: 562 RRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKC 621
R M +G ++LS + LS+L++G++ HC AL A + V S++DMYAKC
Sbjct: 340 REMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKC 399
Query: 622 GCLEQSRRVFDRLKDKDVTSWNAIIGGH---GIHGYGKEAIELFEKMLALGHKPDTFTFV 678
E++ +F L + SW A+I G+ G+HG G ++LF KM + D TF
Sbjct: 400 EMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG---LKLFTKMRGSNLRADQSTFA 456
Query: 679 GILMACNHAGLVENGLKYFSQMQKLHAV---KPKLEHY---ACVVDMLGRAGKLDDAFKL 732
+L A + G ++LHA LE+ + +VDM + G + DA ++
Sbjct: 457 TVLKASASFASLLLG-------KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQV 509
Query: 733 IIEMPEEADAGIWSSLL 749
EMP+ +A W++L+
Sbjct: 510 FEEMPDR-NAVSWNALI 525
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 168/344 (48%), Gaps = 14/344 (4%)
Query: 42 SKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELISASTQFSNDFIIN 101
++S++ L + Q +D +GVL G D +G+++H L S +T FS D +
Sbjct: 232 TESIHLFLKMRQSGHQPSDFT-FSGVLKAVVGLH-DFALGQQLHAL-SVTTGFSRDASVG 288
Query: 102 TRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTEL 161
+++ YS L++R +FD + + +N ++S +++ + Y L F E+
Sbjct: 289 NQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQC-MGF 347
Query: 162 KPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVK 221
NF F ++ ++ + G +H A + V N+L+ MY KC EE
Sbjct: 348 DRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAEL 407
Query: 222 LFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGE 281
+F+ +P+R VSW ++I G + G L KM G D +T TVL A
Sbjct: 408 IFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG--SNLRADQSTFATVLKASASF 465
Query: 282 GNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTII 341
++ LG +H ++ G + + LVDMYAKCG + +A +F++ ++N VSWN +I
Sbjct: 466 ASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALI 525
Query: 342 GAFSMAGD---VCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCS 382
A + GD G F +M E ++P+ V++L VLT+CS
Sbjct: 526 SAHADNGDGEAAIGAF-----AKMIESGLQPDSVSILGVLTACS 564
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 181/427 (42%), Gaps = 40/427 (9%)
Query: 359 KMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAK 418
K+ E++ + L L S + L + + ++ GFD D +N V +
Sbjct: 2 KLYCNSNEVRSRTLATLRQLRQPSPAT-FLDTRRVDARIIKTGFDTDTCRSNFIVEDLLR 60
Query: 419 CGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQM--------------- 463
G +A V+ M + S N +I G+ + GD A D F M
Sbjct: 61 RGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWY 120
Query: 464 ---THSDLE---------------PDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEG 505
+H D PD + +L+ C + ++H F ++ G +
Sbjct: 121 ARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDT 180
Query: 506 DSFTGISLLSLYMHCE--KSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRR 563
+ F +S + L +CE + A VLF+E+ +K V++NT+I GY ++ L E+I LF +
Sbjct: 181 NPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLK 240
Query: 564 MFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGC 623
M G QP + + +L A L LG++ H ++ + DA V I+D Y+K
Sbjct: 241 MRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDR 300
Query: 624 LEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMA 683
+ ++R +FD + + D S+N +I + + ++ F +M +G F F +L
Sbjct: 301 VLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSI 360
Query: 684 CNHAGLVENGLKYFSQMQKLHAVKPKLEHYA-CVVDMLGRAGKLDDAFKLIIEMPEEADA 742
+ ++ G + Q L A + H +VDM + ++A + +P+
Sbjct: 361 AANLSSLQMGRQL--HCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTV 418
Query: 743 GIWSSLL 749
W++L+
Sbjct: 419 S-WTALI 424
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 143/280 (51%), Gaps = 6/280 (2%)
Query: 66 GVLLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 125
+L + +++G+++H +T S + N+ L+ MY+ C ++ +F SL
Sbjct: 355 ATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNS-LVDMYAKCEMFEEAELIFKSLP 413
Query: 126 TRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGS 185
R W AL+SG+ + L+ L +F ++ + L+ D TF V+KA A + G
Sbjct: 414 QRTTVSWTALISGYVQKGLHGAGLKLFTKM-RGSNLRADQSTFATVLKASASFASLLLGK 472
Query: 186 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENG 245
+H + G + +VF + L+ MY KC +++ V++FE MP+RN VSWN++I ++NG
Sbjct: 473 QLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNG 532
Query: 246 FSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGI-LVHGLAVKLGLTRELM 304
+ KM+ E G PD +++ VL C+ G V+ G ++ G+T +
Sbjct: 533 DGEAAIGAFAKMI--ESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKK 590
Query: 305 VNNALVDMYAKCGFLSEAQILFDKNN-NKNVVSWNTIIGA 343
++D+ + G +EA+ L D+ + + W++++ A
Sbjct: 591 HYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 474 bits (1220), Expect = e-132, Method: Compositional matrix adjust.
Identities = 267/820 (32%), Positives = 455/820 (55%), Gaps = 16/820 (1%)
Query: 67 VLLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 126
+LLQAC + + GK+VH + ++ S D + R++ MY++CG D ++F L
Sbjct: 40 LLLQACSNPNLLRQGKQVHAFLIVNS-ISGDSYTDERILGMYAMCGSFSDCGKMFYRLDL 98
Query: 127 R--NLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFG 184
R ++ WN+++S F +N L L+ + ++L + PD TFPC++KAC + +
Sbjct: 99 RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLC-FGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 185 SGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSEN 244
+ + +G+ + FV+++LI Y + ++ KLF+ + +++ V WN ++ N
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVML-----N 212
Query: 245 GFS-CESFDLLIKMMGCE--EGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTR 301
G++ C + D +IK + P+ T VL VCA + +DLG+ +HGL V G+
Sbjct: 213 GYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDF 272
Query: 302 ELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQ 361
E + N+L+ MY+KCG +A LF + + V+WN +I + +G + + +
Sbjct: 273 EGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFF--YE 330
Query: 362 MKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGS 421
M + P+ +T ++L S S+ L K++H Y +RH D + +A + AY KC
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG 390
Query: 422 EISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILA 481
A+N+F +S V + A+I GY NG ++ +L+ F + + P+ ++ S++
Sbjct: 391 VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPV 450
Query: 482 CTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSW 541
L +L G+E+HGF+I+ G + G +++ +Y C + + A +F+ + + +VSW
Sbjct: 451 IGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSW 510
Query: 542 NTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALK 601
N+MI +Q+ P AI +FR+M G+ +SI + LSAC+ L + GK H + +K
Sbjct: 511 NSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK 570
Query: 602 AILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIEL 661
L +D + ++IDMYAKCG L+ + VF +K+K++ SWN+II G HG K+++ L
Sbjct: 571 HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCL 630
Query: 662 FEKML-ALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDML 720
F +M+ G +PD TF+ I+ +C H G V+ G+++F M + + ++P+ EHYACVVD+
Sbjct: 631 FHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLF 690
Query: 721 GRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAENYV 780
GRAG+L +A++ + MP DAG+W +LL +CR + +++ E + L++L+P + YV
Sbjct: 691 GRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYV 750
Query: 781 LVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEIRG 840
L+SN +A + +W+ V +R MKER +QK G SWIE+ H FV GD HPE I
Sbjct: 751 LISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYS 810
Query: 841 MWGRLEEQISKIGYKPYTEAVLHELEEEEKVNILRGHSEK 880
+ L ++ GY P LH E KV + EK
Sbjct: 811 LLNSLLGELRLEGYIPQPYLPLHP-ESSRKVYPVSRFIEK 849
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust.
Identities = 271/750 (36%), Positives = 405/750 (54%), Gaps = 95/750 (12%)
Query: 289 LVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAG 348
LVH +K GL + + N L+++Y+K G+ A+ LFD+ + SWNT++ A+S G
Sbjct: 35 LVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRG 94
Query: 349 DV---CGTFDLLRKMQ--------------------------MKEEEMKPNEVTVLNVLT 379
D+ C FD L + M +E ++P + T+ NVL
Sbjct: 95 DMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLA 154
Query: 380 SCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSS 439
S + + + K++H + ++ G + V+N+ + YAKCG + A+ VF M R +SS
Sbjct: 155 SVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISS 214
Query: 440 WNALIC-------------------------------GYAQNGDHLKALDYFLQMTH-SD 467
WNA+I G+ Q G L+ALD F +M S
Sbjct: 215 WNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSL 274
Query: 468 LEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSAR 527
L PD F++ S++ AC +L+ L GK+IH ++ G + +L+S+Y C +AR
Sbjct: 275 LSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETAR 334
Query: 528 VLFDE---------------------------------MEDKSLVSWNTMIAGYSQNKLP 554
L ++ ++D+ +V+W MI GY Q+
Sbjct: 335 RLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSY 394
Query: 555 VEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSI 614
EAI LFR M G +P ++ ++LS S L++L GK+ H A+K+ V+ ++
Sbjct: 395 GEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNAL 454
Query: 615 IDMYAKCGCLEQSRRVFDRLK-DKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPD 673
I MYAK G + + R FD ++ ++D SW ++I HG+ +EA+ELFE ML G +PD
Sbjct: 455 ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPD 514
Query: 674 TFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLI 733
T+VG+ AC HAGLV G +YF M+ + + P L HYAC+VD+ GRAG L +A + I
Sbjct: 515 HITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFI 574
Query: 734 IEMPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWD 793
+MP E D W SLL +CR + + +G+ A+ LL LEP+ + Y ++N+Y+ KW+
Sbjct: 575 EKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWE 634
Query: 794 DVRMMRQRMKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQISKIG 853
+ +R+ MK+ ++KE G SWIE+ +H F V D HPE EI ++ ++I K+G
Sbjct: 635 EAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMG 694
Query: 854 YKPYTEAVLHELEEEEKVNILRGHSEKLAISFGLLKTTKDLTLRVCKNLRICVDCHNAAK 913
Y P T +VLH+LEEE K ILR HSEKLAI+FGL+ T TLR+ KNLR+C DCH A K
Sbjct: 695 YVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIK 754
Query: 914 LISKVAEREIVIRDNKRFHHFRDGVCSCGD 943
ISK+ REI++RD RFHHF+DG CSC D
Sbjct: 755 FISKLVGREIIVRDTTRFHHFKDGFCSCRD 784
Score = 199 bits (507), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 142/563 (25%), Positives = 259/563 (46%), Gaps = 99/563 (17%)
Query: 187 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENG- 245
VH K GL+ V++ N L+ +Y K + KLF+ MP R SWN+++ S+ G
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 246 --FSCESFDLL------------------------IKMMG--CEEGFIPDVATVVTVLPV 277
+CE FD L I++MG +EG P T+ VL
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 278 CAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDK--------- 328
A ++ G VH VKLGL + V+N+L++MYAKCG A+ +FD+
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 329 ----------------------NNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEE 366
+++V+WN++I F+ G D+ KM +++
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKM-LRDSL 274
Query: 367 MKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEIS-- 424
+ P+ T+ +VL++C+ +L K++H + + GFD +V NA + Y++CG +
Sbjct: 275 LSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETAR 334
Query: 425 -------------------------------AENVFHGMDSRTVSSWNALICGYAQNGDH 453
A+N+F + R V +W A+I GY Q+G +
Sbjct: 335 RLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSY 394
Query: 454 LKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISL 513
+A++ F M P+ +++ +++ + L SL GK+IHG +++G +L
Sbjct: 395 GEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNAL 454
Query: 514 LSLYMHCEKSSSARVLFDEME-DKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPC 572
+++Y +SA FD + ++ VSW +MI +Q+ EA+ LF M G++P
Sbjct: 455 ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPD 514
Query: 573 EISIVSILSACSQLSALRLGKETH--CYALKAILTNDAFVACSIIDMYAKCGCLEQSRRV 630
I+ V + SAC+ + G++ + I+ + AC ++D++ + G L++++
Sbjct: 515 HITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYAC-MVDLFGRAGLLQEAQEF 573
Query: 631 FDRLK-DKDVTSWNAIIGGHGIH 652
+++ + DV +W +++ +H
Sbjct: 574 IEKMPIEPDVVTWGSLLSACRVH 596
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 165/695 (23%), Positives = 281/695 (40%), Gaps = 163/695 (23%)
Query: 98 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVEL-- 155
+++N L+ +YS G+ L +R++FD + R F WN ++S ++K F +L
Sbjct: 50 YLMNN-LMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQ 108
Query: 156 ----------------------------LSDTELKPDNFTFPCVIKACGGIADVSFGSGV 187
+ ++P FT V+ + + G V
Sbjct: 109 RDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKV 168
Query: 188 HGMAAKMGLIGDVFVSNALIAMYGKCA------FV------------EEMVKL------- 222
H K+GL G+V VSN+L+ MY KC FV M+ L
Sbjct: 169 HSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQM 228
Query: 223 ------FEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLP 276
FE M ER++V+WNS+I G ++ G+ + D+ KM+ + PD T+ +VL
Sbjct: 229 DLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR-DSLLSPDRFTLASVLS 287
Query: 277 VCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILF---------- 326
CA + +G +H V G +V NAL+ MY++CG + A+ L
Sbjct: 288 ACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKI 347
Query: 327 --------------DKNNNKN---------VVSWNTIIGAFSMAGDVCGTFDLLRKMQMK 363
D N KN VV+W +I + G +L R M
Sbjct: 348 EGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGG 407
Query: 364 EEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEI 423
+ +PN T+ +L+ S + L K++HG +++ G V+NA + YAK G+
Sbjct: 408 GQ--RPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNIT 465
Query: 424 SAENVFHGMD-SRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILAC 482
SA F + R SW ++I AQ+G +AL+ F M L PD + + AC
Sbjct: 466 SASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 525
Query: 483 THLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMED-----KS 537
TH +++G++ FD M+D +
Sbjct: 526 THAGLVNQGRQ-----------------------------------YFDMMKDVDKIIPT 550
Query: 538 LVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHC 597
L + M+ + + L EA +M ++P ++ S+LSAC + LGK
Sbjct: 551 LSHYACMVDLFGRAGLLQEAQEFIEKM---PIEPDVVTWGSLLSACRVHKNIDLGK-VAA 606
Query: 598 YALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVT-----SWNAIIGGHGIH 652
L + ++ ++ ++Y+ CG E++ ++ +KD V SW + H +H
Sbjct: 607 ERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEV--KHKVH 664
Query: 653 GYGKE-------------AIELFEKMLALGHKPDT 674
+G E ++++++ +G+ PDT
Sbjct: 665 VFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDT 699
Score = 136 bits (342), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 129/534 (24%), Positives = 228/534 (42%), Gaps = 106/534 (19%)
Query: 68 LLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 127
+L + + +E GK+VH I + ++ L+ MY+ CG P+ ++ VFD + R
Sbjct: 152 VLASVAATRCMETGKKVHSFI-VKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVR 210
Query: 128 NLFQWNA-------------------------------LVSGFTKNELYPDVLSIFVELL 156
++ WNA ++SGF + L IF ++L
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Query: 157 SDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 216
D+ L PD FT V+ AC + + G +H G V NALI+MY +C V
Sbjct: 271 RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGV 330
Query: 217 EEMVKLFE---------------------------------VMPERNLVSWNSIICGSSE 243
E +L E + +R++V+W ++I G +
Sbjct: 331 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ 390
Query: 244 NGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTREL 303
+G E+ +L M+G G P+ T+ +L V + ++ G +HG AVK G +
Sbjct: 391 HGSYGEAINLFRSMVGG--GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSV 448
Query: 304 MVNNALVDMYAKCGFLSEAQILFDKNN-NKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQM 362
V+NAL+ MYAK G ++ A FD ++ VSW ++I A + G +L M M
Sbjct: 449 SVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLM 508
Query: 363 KEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSE 422
E ++P+ +T + V ++C+ + L++ + ++ D D+++
Sbjct: 509 --EGLRPDHITYVGVFSACTH-AGLVNQGRQYFDMMK---DVDKIIP------------- 549
Query: 423 ISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILAC 482
T+S + ++ + + G +A ++ +M +EPD+ + GSL+ AC
Sbjct: 550 -------------TLSHYACMVDLFGRAGLLQEAQEFIEKMP---IEPDVVTWGSLLSAC 593
Query: 483 THLKSLHRGKEIHGFVIRNGLEGDSFTGISLLS-LYMHCEKSSSARVLFDEMED 535
K++ GK ++ LE ++ S L+ LY C K A + M+D
Sbjct: 594 RVHKNIDLGKVAAERLLL--LEPENSGAYSALANLYSACGKWEEAAKIRKSMKD 645
Score = 116 bits (290), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 163/337 (48%), Gaps = 41/337 (12%)
Query: 43 KSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELISASTQFSNDFIINT 102
++L+ +L+++L + D + +L AC + + + IGK++H I +T F I+
Sbjct: 261 RALDIFSKMLRDSLLSPD-RFTLASVLSACANLEKLCIGKQIHSHI-VTTGFDISGIVLN 318
Query: 103 RLITMYSLCGFPLDSRR---------------------------------VFDSLKTRNL 129
LI+MYS CG +RR +F SLK R++
Sbjct: 319 ALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDV 378
Query: 130 FQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHG 189
W A++ G+ ++ Y + +++F ++ + +P+++T ++ +A +S G +HG
Sbjct: 379 VAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ-RPNSYTLAAMLSVASSLASLSHGKQIHG 437
Query: 190 MAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGSSENGFSC 248
A K G I V VSNALI MY K + + F+++ ER+ VSW S+I +++G +
Sbjct: 438 SAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Query: 249 ESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNA 308
E+ +L M+ EG PD T V V C G V+ G + + + + A
Sbjct: 498 EALELFETML--MEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYA 555
Query: 309 -LVDMYAKCGFLSEAQILFDKNN-NKNVVSWNTIIGA 343
+VD++ + G L EAQ +K +VV+W +++ A
Sbjct: 556 CMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/140 (18%), Positives = 63/140 (45%), Gaps = 12/140 (8%)
Query: 571 PCEISIVSILSACSQLSALRLGKE--------THCYALKAILTNDAFVACSIIDMYAKCG 622
P +S+ ++L C+ L + K HC +K+ L ++ +++++Y+K G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 623 CLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILM 682
+R++FD + + SWN ++ + G E F+++ + D+ ++ +++
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQL----PQRDSVSWTTMIV 119
Query: 683 ACNHAGLVENGLKYFSQMQK 702
+ G ++ M K
Sbjct: 120 GYKNIGQYHKAIRVMGDMVK 139
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 468 bits (1204), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/629 (40%), Positives = 379/629 (60%), Gaps = 12/629 (1%)
Query: 325 LFDKNNNK-NVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSE 383
LF++ +K +V SWN++I + +GD LL M++ + P + + +CS
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEA--LLAFSSMRKLSLYPTRSSFPCAIKACSS 88
Query: 384 KSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNAL 443
++ S K+ H + G+ +D V++A +V Y+ CG A VF + R + SW ++
Sbjct: 89 LFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSM 148
Query: 444 ICGYAQNGDHLKALDYF--LQMTHSDLEPDLF--SIG--SLILACTHLKSLHRGKEIHGF 497
I GY NG+ L A+ F L + +D + +F S+G S+I AC+ + + + IH F
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
Query: 498 VIRNGLEGDSFTGISLLSLYMHCEKS--SSARVLFDEMEDKSLVSWNTMIAGYSQNKLPV 555
VI+ G + G +LL Y + + AR +FD++ DK VS+N++++ Y+Q+ +
Sbjct: 209 VIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSN 268
Query: 556 EAIVLFRRMFSIGVQPCE-ISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSI 614
EA +FRR+ V I++ ++L A S ALR+GK H ++ L +D V SI
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSI 328
Query: 615 IDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDT 674
IDMY KCG +E +R+ FDR+K+K+V SW A+I G+G+HG+ +A+ELF M+ G +P+
Sbjct: 329 IDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNY 388
Query: 675 FTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLII 734
TFV +L AC+HAGL G ++F+ M+ V+P LEHY C+VD+LGRAG L A+ LI
Sbjct: 389 ITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQ 448
Query: 735 EMPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDD 794
M + D+ IWSSLL +CR + +++ E L EL+ Y+L+S+IYA + +W D
Sbjct: 449 RMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKD 508
Query: 795 VRMMRQRMKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQISKIGY 854
V +R MK RGL K G S +EL G +H F++GD HP+ E+I L ++ + GY
Sbjct: 509 VERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGY 568
Query: 855 KPYTEAVLHELEEEEKVNILRGHSEKLAISFGLLKTTKDLTLRVCKNLRICVDCHNAAKL 914
T +V H+++EEEK LR HSEKLAI+FG++ T T+ V KNLR+C DCHN KL
Sbjct: 569 VSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKL 628
Query: 915 ISKVAEREIVIRDNKRFHHFRDGVCSCGD 943
ISK+ +RE V+RD KRFHHF+DG CSCGD
Sbjct: 629 ISKIVDREFVVRDAKRFHHFKDGGCSCGD 657
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 200/384 (52%), Gaps = 13/384 (3%)
Query: 128 NLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGV 187
++F WN++++ ++ + L F + L P +FPC IKAC + D+ G
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSM-RKLSLYPTRSSFPCAIKACSSLFDIFSGKQT 98
Query: 188 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFS 247
H A G D+FVS+ALI MY C +E+ K+F+ +P+RN+VSW S+I G NG +
Sbjct: 99 HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNA 158
Query: 248 CESF----DLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTREL 303
++ DLL+ ++ D +V+V+ C+ L +H +K G R +
Sbjct: 159 LDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGV 218
Query: 304 MVNNALVDMYAKC--GFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQ 361
V N L+D YAK G ++ A+ +FD+ +K+ VS+N+I+ ++ +G F++ R++
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL- 277
Query: 362 MKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGS 421
+K + + N +T+ VL + S L K +H +R G ++D +V + + Y KCG
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGR 337
Query: 422 EISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILA 481
+A F M ++ V SW A+I GY +G KAL+ F M S + P+ + S++ A
Sbjct: 338 VETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAA 397
Query: 482 CTHLKSLHRGKEIHGFVIRNGLEG 505
C+H G + G+ N ++G
Sbjct: 398 CSHA-----GLHVEGWRWFNAMKG 416
Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 166/321 (51%), Gaps = 11/321 (3%)
Query: 69 LQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 128
++AC DI GK+ H+ + + +D +++ LI MYS CG D+R+VFD + RN
Sbjct: 83 IKACSSLFDIFSGKQTHQQ-AFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRN 141
Query: 129 LFQWNALVSGFTKNELYPDVLSIFVELL-----SDTELKPDNFTFPCVIKACGGIADVSF 183
+ W +++ G+ N D +S+F +LL D + D+ VI AC +
Sbjct: 142 IVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGL 201
Query: 184 GSGVHGMAAKMGLIGDVFVSNALIAMYGKC--AFVEEMVKLFEVMPERNLVSWNSIICGS 241
+H K G V V N L+ Y K V K+F+ + +++ VS+NSI+
Sbjct: 202 TESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVY 261
Query: 242 SENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTR 301
+++G S E+F++ +++ + + T+ TVL + G + +G +H +++GL
Sbjct: 262 AQSGMSNEAFEVFRRLVK-NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED 320
Query: 302 ELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQ 361
+++V +++DMY KCG + A+ FD+ NKNV SW +I + M G +L
Sbjct: 321 DVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFP--A 378
Query: 362 MKEEEMKPNEVTVLNVLTSCS 382
M + ++PN +T ++VL +CS
Sbjct: 379 MIDSGVRPNYITFVSVLAACS 399
Score = 96.7 bits (239), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 103/192 (53%), Gaps = 13/192 (6%)
Query: 514 LSLYMHCEKSSSAR---VLFDEMEDKSLV-SWNTMIAGYSQNKLPVEAIVLFRRMFSIGV 569
+S +H E+ + + LF+ DK+ V SWN++IA +++ EA++ F M + +
Sbjct: 13 VSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSL 72
Query: 570 QPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRR 629
P S + ACS L + GK+TH A +D FV+ ++I MY+ CG LE +R+
Sbjct: 73 YPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARK 132
Query: 630 VFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTF------VGILMA 683
VFD + +++ SW ++I G+ ++G +A+ LF+ +L + D F V ++ A
Sbjct: 133 VFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISA 192
Query: 684 CNHA---GLVEN 692
C+ GL E+
Sbjct: 193 CSRVPAKGLTES 204
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 115/229 (50%), Gaps = 4/229 (1%)
Query: 117 SRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACG 176
+R++FD + ++ +N+++S + ++ + + +F L+ + + + T V+ A
Sbjct: 239 ARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVS 298
Query: 177 GIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 236
+ G +H +MGL DV V ++I MY KC VE K F+ M +N+ SW +
Sbjct: 299 HSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTA 358
Query: 237 IICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEG-NVDLGILVHGLAV 295
+I G +G + ++ +L M+ + G P+ T V+VL C+ G +V+ + +
Sbjct: 359 MIAGYGMHGHAAKALELFPAMI--DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKG 416
Query: 296 KLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNK-NVVSWNTIIGA 343
+ G+ L +VD+ + GFL +A L + K + + W++++ A
Sbjct: 417 RFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 468 bits (1204), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/600 (39%), Positives = 360/600 (60%), Gaps = 6/600 (1%)
Query: 350 VCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVA 409
+C L + +++ +E P++ T ++ C +S L +H + L +G D D +A
Sbjct: 56 LCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLA 115
Query: 410 NAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLE 469
+ Y+ GS A VF RT+ WNAL G + L + +M +E
Sbjct: 116 TKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVE 175
Query: 470 PDLFSIGSLILACT----HLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSS 525
D F+ ++ AC + L +GKEIH + R G + +L+ +Y
Sbjct: 176 SDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDY 235
Query: 526 ARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMF--SIGVQPCEISIVSILSAC 583
A +F M +++VSW+ MIA Y++N EA+ FR M + P +++VS+L AC
Sbjct: 236 ASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQAC 295
Query: 584 SQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWN 643
+ L+AL GK H Y L+ L + V +++ MY +CG LE +RVFDR+ D+DV SWN
Sbjct: 296 ASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWN 355
Query: 644 AIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKL 703
++I +G+HGYGK+AI++FE+MLA G P TFV +L AC+H GLVE G + F M +
Sbjct: 356 SLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRD 415
Query: 704 HAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYGALKMGEK 763
H +KP++EHYAC+VD+LGRA +LD+A K++ +M E +W SLL SCR +G +++ E+
Sbjct: 416 HGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAER 475
Query: 764 VAKTLLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGCSWIELGGNIH 823
++ L LEP A NYVL+++IYA ++ WD+V+ +++ ++ RGLQK G W+E+ ++
Sbjct: 476 ASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMY 535
Query: 824 SFVVGDNMHPEWEEIRGMWGRLEEQISKIGYKPYTEAVLHELEEEEKVNILRGHSEKLAI 883
SFV D +P E+I +L E + + GY P T+ VL+ELE EEK I+ GHSEKLA+
Sbjct: 536 SFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLAL 595
Query: 884 SFGLLKTTKDLTLRVCKNLRICVDCHNAAKLISKVAEREIVIRDNKRFHHFRDGVCSCGD 943
+FGL+ T+K +R+ KNLR+C DCH K ISK E+EI++RD RFH F++GVCSCGD
Sbjct: 596 AFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGD 655
Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 186/356 (52%), Gaps = 11/356 (3%)
Query: 33 QEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELISAST 92
Q I +LC+E K L +A+ +L + ++ ++ +L+ CGH + RVH I +
Sbjct: 51 QLIQSLCKEGK-LKQAIRVLSQE--SSPSQQTYELLILCCGHRSSLSDALRVHRHILDNG 107
Query: 93 QFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIF 152
+ F+ T+LI MYS G +R+VFD + R ++ WNAL T +VL ++
Sbjct: 108 SDQDPFLA-TKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 153 VELLSDTELKPDNFTFPCVIKACGG----IADVSFGSGVHGMAAKMGLIGDVFVSNALIA 208
+ ++ ++ D FT+ V+KAC + + G +H + G V++ L+
Sbjct: 167 WK-MNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 209 MYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDV 268
MY + V+ +F MP RN+VSW+++I ++NG + E+ +MM + P+
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 269 ATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDK 328
T+V+VL CA ++ G L+HG ++ GL L V +ALV MY +CG L Q +FD+
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDR 345
Query: 329 NNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEK 384
++++VVSWN++I ++ + G + +M P VT ++VL +CS +
Sbjct: 346 MHDRDVVSWNSLISSYGVHGYGKKAIQIFE--EMLANGASPTPVTFVSVLGACSHE 399
Score = 150 bits (378), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 158/341 (46%), Gaps = 10/341 (2%)
Query: 160 ELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 219
E P T+ +I CG + +S VH G D F++ LI MY V+
Sbjct: 72 ESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYA 131
Query: 220 VKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKM--MGCEEGFIPDVATVVTVLPV 277
K+F+ +R + WN++ + G E L KM +G E D T VL
Sbjct: 132 RKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVES----DRFTYTYVLKA 187
Query: 278 C-AGEGNVD---LGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKN 333
C A E V+ G +H + G + + + LVDMYA+ G + A +F +N
Sbjct: 188 CVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRN 247
Query: 334 VVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKEL 393
VVSW+ +I ++ G R+M + ++ PN VT+++VL +C+ + L K +
Sbjct: 248 VVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLI 307
Query: 394 HGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDH 453
HGY LR G D+ V +A V Y +CG + VF M R V SWN+LI Y +G
Sbjct: 308 HGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYG 367
Query: 454 LKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEI 494
KA+ F +M + P + S++ AC+H + GK +
Sbjct: 368 KKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRL 408
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 158/316 (50%), Gaps = 6/316 (1%)
Query: 81 GKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFT 140
GK +H ++ S+ +I+ T L+ MY+ G + VF + RN+ W+A+++ +
Sbjct: 201 GKEIHAHLTRRGYSSHVYIMTT-LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYA 259
Query: 141 KNELYPDVLSIFVELLSDT-ELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGD 199
KN + L F E++ +T + P++ T V++AC +A + G +HG + GL
Sbjct: 260 KNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSI 319
Query: 200 VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMG 259
+ V +AL+ MYG+C +E ++F+ M +R++VSWNS+I +G+ ++ + +M+
Sbjct: 320 LPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLA 379
Query: 260 CEEGFIPDVATVVTVLPVCAGEGNVDLGI-LVHGLAVKLGLTRELMVNNALVDMYAKCGF 318
G P T V+VL C+ EG V+ G L + G+ ++ +VD+ +
Sbjct: 380 --NGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANR 437
Query: 319 LSE-AQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNV 377
L E A+++ D W +++G+ + G+V R++ E + N V + ++
Sbjct: 438 LDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADI 497
Query: 378 LTSCSEKSELLSLKEL 393
E+ +K+L
Sbjct: 498 YAEAQMWDEVKRVKKL 513
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 4/173 (2%)
Query: 68 LLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 127
+LQAC +E GK +H I + + + L+TMY CG +RVFD + R
Sbjct: 291 VLQACASLAALEQGKLIHGYI-LRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDR 349
Query: 128 NLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGV 187
++ WN+L+S + + + IF E+L++ P TF V+ AC V G +
Sbjct: 350 DVVSWNSLISSYGVHGYGKKAIQIFEEMLANGA-SPTPVTFVSVLGACSHEGLVEEGKRL 408
Query: 188 -HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVM-PERNLVSWNSII 238
M G+ + ++ + G+ ++E K+ + M E W S++
Sbjct: 409 FETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLL 461
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 465 bits (1196), Expect = e-130, Method: Compositional matrix adjust.
Identities = 268/794 (33%), Positives = 431/794 (54%), Gaps = 11/794 (1%)
Query: 153 VELLSDTELKP--DNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMY 210
++L S + P D+ + +++ C D +H K G D+F +N L+ Y
Sbjct: 35 LDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAY 94
Query: 211 GKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVAT 270
K F ++ + LF+ MPERN VS+ ++ G++C+ L + EG +
Sbjct: 95 VKAGFDKDALNLFDEMPERNNVSFVTL-----AQGYACQDPIGLYSRLH-REGHELNPHV 148
Query: 271 VVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNN 330
+ L + ++ +H VKLG V AL++ Y+ CG + A+ +F+
Sbjct: 149 FTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGIL 208
Query: 331 NKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSL 390
K++V W I+ + G + LL M+M PN T L +
Sbjct: 209 CKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAG--FMPNNYTFDTALKASIGLGAFDFA 266
Query: 391 KELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQN 450
K +HG L+ + D V + Y + G A VF+ M V W+ +I + QN
Sbjct: 267 KGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQN 326
Query: 451 GDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTG 510
G +A+D F++M + + P+ F++ S++ C K G+++HG V++ G + D +
Sbjct: 327 GFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVS 386
Query: 511 ISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQ 570
+L+ +Y CEK +A LF E+ K+ VSWNT+I GY +A +FR V
Sbjct: 387 NALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVS 446
Query: 571 PCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRV 630
E++ S L AC+ L+++ LG + H A+K V+ S+IDMYAKCG ++ ++ V
Sbjct: 447 VTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSV 506
Query: 631 FDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLV 690
F+ ++ DV SWNA+I G+ HG G++A+ + + M KP+ TF+G+L C++AGL+
Sbjct: 507 FNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLI 566
Query: 691 ENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLR 750
+ G + F M + H ++P LEHY C+V +LGR+G+LD A KLI +P E IW ++L
Sbjct: 567 DQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLS 626
Query: 751 SCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQKE 810
+ + + A+ +L++ P YVLVSN+YAG+++W +V +R+ MKE G++KE
Sbjct: 627 ASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKE 686
Query: 811 AGCSWIELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQISKIGYKPYTEAVLHELEEEEK 870
G SWIE G++H F VG + HP+ + I GM L + ++ GY P AVL ++++EEK
Sbjct: 687 PGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEK 746
Query: 871 VNILRGHSEKLAISFGLLKTTKDLT-LRVCKNLRICVDCHNAAKLISKVAEREIVIRDNK 929
L HSE+LA+++GL++ + + KNLRIC DCH+A K+IS + +R++VIRD
Sbjct: 747 DKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMN 806
Query: 930 RFHHFRDGVCSCGD 943
RFHHF GVCSCGD
Sbjct: 807 RFHHFHAGVCSCGD 820
Score = 207 bits (526), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 185/742 (24%), Positives = 325/742 (43%), Gaps = 53/742 (7%)
Query: 64 ATGVLLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 123
A G +L+ C + D K +H I + F N L+ Y GF D+ +FD
Sbjct: 51 AYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNI-LLNAYVKAGFDKDALNLFDE 109
Query: 124 LKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDT-ELKPDNFTFPCVIKACGGIADVS 182
+ RN + L G+ D + ++ L + EL P FT +K +
Sbjct: 110 MPERNNVSFVTLAQGYACQ----DPIGLYSRLHREGHELNPHVFT--SFLKLFVSLDKAE 163
Query: 183 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSS 242
+H K+G + FV ALI Y C V+ +FE + +++V W I+
Sbjct: 164 ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 243 ENGFSCESFDLLIKMMGCEE--GFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLT 300
ENG+ F+ +K++ C GF+P+ T T L G G D VHG +K
Sbjct: 224 ENGY----FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYV 279
Query: 301 RELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKM 360
+ V L+ +Y + G +S+A +F++ +VV W+ +I F G DL +
Sbjct: 280 LDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLF--I 337
Query: 361 QMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCG 420
+M+E + PNE T+ ++L C+ ++LHG ++ GFD D V+NA + YAKC
Sbjct: 338 RMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCE 397
Query: 421 SEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLIL 480
+A +F + S+ SWN +I GY G+ KA F + + + + S +
Sbjct: 398 KMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALG 457
Query: 481 ACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVS 540
AC L S+ G ++HG I+ SL+ +Y C A+ +F+EME + S
Sbjct: 458 ACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVAS 517
Query: 541 WNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYAL 600
WN +I+GYS + L +A+ + M +P ++ + +LS CS + G+E C+
Sbjct: 518 WNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQE--CF-- 573
Query: 601 KAILTNDAFVAC-----SIIDMYAKCGCLEQSRRVFDRLK-DKDVTSWNAIIGGHGIHGY 654
++++ + C ++ + + G L+++ ++ + + + V W A++
Sbjct: 574 ESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNN 633
Query: 655 GKEAIELFEKMLALGHKPD-TFTFVGILMA-----CNHAGLV----------ENGLKYFS 698
+ A E++L + K + T+ V + A N A + E GL +
Sbjct: 634 EEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIE 693
Query: 699 QMQKLHAVK------PKLEHYACVVDMLG----RAGKLDDAFKLIIEM-PEEADAGIWSS 747
+H P ++ +++ L RAG + D ++++M EE D +W
Sbjct: 694 HQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVH 753
Query: 748 LLRSCRTYGALKMGEKVAKTLL 769
R YG ++M + L+
Sbjct: 754 SERLALAYGLVRMPSSRNRILI 775
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 464 bits (1194), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/671 (36%), Positives = 380/671 (56%), Gaps = 37/671 (5%)
Query: 307 NALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEE 366
N L+ Y+K G +SE + F+K +++ V+WN +I +S++G V M M++
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM-MRDFS 134
Query: 367 MKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAE 426
VT++ +L S + K++HG ++ GF++ LV + + YA G A+
Sbjct: 135 ANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAK 194
Query: 427 NVFHGMDSRTVS------------------------------SWNALICGYAQNGDHLKA 456
VF+G+D R SW A+I G AQNG +A
Sbjct: 195 KVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEA 254
Query: 457 LDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSL 516
++ F +M L+ D + GS++ AC L +++ GK+IH +IR + + G +L+ +
Sbjct: 255 IECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDM 314
Query: 517 YMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISI 576
Y C+ A+ +FD M+ K++VSW M+ GY Q EA+ +F M G+ P ++
Sbjct: 315 YCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 577 VSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKD 636
+SAC+ +S+L G + H A+ + L + V+ S++ +Y KCG ++ S R+F+ +
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV 434
Query: 637 KDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKY 696
+D SW A++ + G E I+LF+KM+ G KPD T G++ AC+ AGLVE G +Y
Sbjct: 435 RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRY 494
Query: 697 FSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYG 756
F M + + P + HY+C++D+ R+G+L++A + I MP DA W++LL +CR G
Sbjct: 495 FKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Query: 757 ALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGCSWI 816
L++G+ A++L+EL+P Y L+S+IYA KWD V +R+ M+E+ ++KE G SWI
Sbjct: 555 NLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWI 614
Query: 817 ELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQISKI---GYKPYTEAVLHELEEEEKVNI 873
+ G +HSF D P ++I + +LEE +KI GYKP T V H++EE KV +
Sbjct: 615 KWKGKLHSFSADDESSPYLDQI---YAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKM 671
Query: 874 LRGHSEKLAISFGLLKTTKDLTLRVCKNLRICVDCHNAAKLISKVAEREIVIRDNKRFHH 933
L HSE+LAI+FGL+ +RV KNLR+CVDCHNA K IS V REI++RD RFH
Sbjct: 672 LNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHR 731
Query: 934 FRDGVCSCGDI 944
F+DG CSCGD
Sbjct: 732 FKDGTCSCGDF 742
Score = 214 bits (545), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 141/519 (27%), Positives = 245/519 (47%), Gaps = 45/519 (8%)
Query: 163 PDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKL 222
P+ F + ++ A + ++ V + L F N L+ Y K + EM
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVFDRIPQPNL----FSWNNLLLAYSKAGLISEMEST 94
Query: 223 FEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEG 282
FE +P+R+ V+WN +I G S +G + MM + V T++T+L + + G
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRV-TLMTMLKLSSSNG 153
Query: 283 NVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIG 342
+V LG +HG +KLG L+V + L+ MYA G +S+A+ +F +++N V +N+++G
Sbjct: 154 HVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMG 213
Query: 343 AFSMAGDVCGTFDLLRKMQ----------------------------MKEEEMKPNEVTV 374
G + L R M+ MK + +K ++
Sbjct: 214 GLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPF 273
Query: 375 LNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDS 434
+VL +C + K++H +R F + V +A + Y KC A+ VF M
Sbjct: 274 GSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ 333
Query: 435 RTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEI 494
+ V SW A++ GY Q G +A+ FL M S ++PD +++G I AC ++ SL G +
Sbjct: 334 KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF 393
Query: 495 HGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLP 554
HG I +GL SL++LY C + LF+EM + VSW M++ Y+Q
Sbjct: 394 HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRA 453
Query: 555 VEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSI 614
VE I LF +M G++P +++ ++SACS+ + G+ ++T++ + SI
Sbjct: 454 VETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYF-----KLMTSEYGIVPSI 508
Query: 615 ------IDMYAKCGCLEQSRRVFDRLK-DKDVTSWNAII 646
ID++++ G LE++ R + + D W ++
Sbjct: 509 GHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLL 547
Score = 173 bits (439), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 120/504 (23%), Positives = 213/504 (42%), Gaps = 73/504 (14%)
Query: 52 LQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLC 111
+ N ++ +K+ G+ G K +H I + + F+ N ++ Y+L
Sbjct: 1 MASNYYSVQIKQCIGL-----GARNQSRYVKMIHGNIIRALPYPETFLYNN-IVHAYALM 54
Query: 112 GFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVEL---------------- 155
+RRVFD + NLF WN L+ ++K L ++ S F +L
Sbjct: 55 KSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYS 114
Query: 156 ---------------LSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDV 200
+ D T ++K VS G +HG K+G +
Sbjct: 115 LSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYL 174
Query: 201 FVSNALIAMYGK-------------------------------CAFVEEMVKLFEVMPER 229
V + L+ MY C +E+ ++LF M E+
Sbjct: 175 LVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EK 233
Query: 230 NLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGIL 289
+ VSW ++I G ++NG + E+ + +M +G D +VLP C G G ++ G
Sbjct: 234 DSVSWAAMIKGLAQNGLAKEAIECFREMK--VQGLKMDQYPFGSVLPACGGLGAINEGKQ 291
Query: 290 VHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGD 349
+H ++ + V +AL+DMY KC L A+ +FD+ KNVVSW ++ + G
Sbjct: 292 IHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGR 351
Query: 350 VCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVA 409
+ + M+ + P+ T+ +++C+ S L + HG ++ G + V+
Sbjct: 352 AEEAVKIF--LDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVS 409
Query: 410 NAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLE 469
N+ V Y KCG + +F+ M+ R SW A++ YAQ G ++ + F +M L+
Sbjct: 410 NSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLK 469
Query: 470 PDLFSIGSLILACTHLKSLHRGKE 493
PD ++ +I AC+ + +G+
Sbjct: 470 PDGVTLTGVISACSRAGLVEKGQR 493
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 147/287 (51%), Gaps = 6/287 (2%)
Query: 66 GVLLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 125
G +L ACG I GK++H I T F + + + LI MY C ++ VFD +K
Sbjct: 274 GSVLPACGGLGAINEGKQIHACI-IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 332
Query: 126 TRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGS 185
+N+ W A+V G+ + + + IF+++ + + PD++T I AC ++ + GS
Sbjct: 333 QKNVVSWTAMVVGYGQTGRAEEAVKIFLDM-QRSGIDPDHYTLGQAISACANVSSLEEGS 391
Query: 186 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENG 245
HG A GLI V VSN+L+ +YGKC +++ +LF M R+ VSW +++ ++ G
Sbjct: 392 QFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFG 451
Query: 246 FSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAV-KLGLTRELM 304
+ E+ L KM+ + G PD T+ V+ C+ G V+ G L + G+ +
Sbjct: 452 RAVETIQLFDKMV--QHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIG 509
Query: 305 VNNALVDMYAKCGFLSEAQILFDKNN-NKNVVSWNTIIGAFSMAGDV 350
+ ++D++++ G L EA + + + W T++ A G++
Sbjct: 510 HYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNL 556
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 143/351 (40%), Gaps = 83/351 (23%)
Query: 492 KEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQ- 550
K IHG +IR ++F +++ Y + S+ AR +FD + +L SWN ++ YS+
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 551 ----------NKLP-----------------------VEAIVLFRRMFSIGVQPCEISIV 577
KLP V+A R FS + ++++
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANL--TRVTLM 143
Query: 578 SILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKD- 636
++L S + LGK+ H +K + V ++ MYA GC+ +++VF L D
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR 203
Query: 637 -----------------------------KDVTSWNAIIGGHGIHGYGKEAIELFEKMLA 667
KD SW A+I G +G KEAIE F +M
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKV 263
Query: 668 LGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHA--VKPKLEHY----ACVVDMLG 721
G K D + F +L AC G + G +++HA ++ + + + ++DM
Sbjct: 264 QGLKMDQYPFGSVLPACGGLGAINEG-------KQIHACIIRTNFQDHIYVGSALIDMYC 316
Query: 722 RAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELE 772
+ L A K + + ++ + W++++ YG E+ K L+++
Sbjct: 317 KCKCLHYA-KTVFDRMKQKNVVSWTAMVVG---YGQTGRAEEAVKIFLDMQ 363
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 590 RLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGH 649
R K H ++A+ + F+ +I+ YA +RRVFDR+ ++ SWN ++ +
Sbjct: 23 RYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAY 82
Query: 650 GIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQK 702
G E FEK+ D T+ ++ + +GLV +K ++ M +
Sbjct: 83 SKAGLISEMESTFEKL----PDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMR 131
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 458 bits (1179), Expect = e-128, Method: Compositional matrix adjust.
Identities = 249/694 (35%), Positives = 394/694 (56%), Gaps = 44/694 (6%)
Query: 289 LVHGLAVKLGLTRELMVNNALVDMYAKCGF------LSEAQILFDKNNNKNVVSWNTIIG 342
++H +K+GL N AL + C L A +F N++ WNT+
Sbjct: 51 IIHAQMIKIGLHN---TNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFR 107
Query: 343 AFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGF 402
+++ D L + M + PN T VL SC++ +++HG+ L+ G
Sbjct: 108 GHALSSDPVSALKLY--VCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGC 165
Query: 403 DNDELV-------------------------------ANAFVVAYAKCGSEISAENVFHG 431
D D V A + YA G +A+ +F
Sbjct: 166 DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDE 225
Query: 432 MDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRG 491
+ + V SWNA+I GYA+ G++ +AL+ F M +++ PD ++ +++ AC S+ G
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285
Query: 492 KEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQN 551
+++H ++ +G + +L+ LY C + +A LF+ + K ++SWNT+I GY+
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345
Query: 552 KLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAI--LTNDAF 609
L EA++LF+ M G P +++++SIL AC+ L A+ +G+ H Y K + +TN +
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 405
Query: 610 VACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALG 669
+ S+IDMYAKCG +E + +VF+ + K ++SWNA+I G +HG + +LF +M +G
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465
Query: 670 HKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDA 729
+PD TFVG+L AC+H+G+++ G F M + + + PKLEHY C++D+LG +G +A
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 525
Query: 730 FKLIIEMPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGS 789
++I M E D IW SLL++C+ +G +++GE A+ L+++EP+ +YVL+SNIYA +
Sbjct: 526 EEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASA 585
Query: 790 EKWDDVRMMRQRMKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQI 849
+W++V R + ++G++K GCS IE+ +H F++GD HP EI GM +E +
Sbjct: 586 GRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLL 645
Query: 850 SKIGYKPYTEAVLHELEEEEKVNILRGHSEKLAISFGLLKTTKDLTLRVCKNLRICVDCH 909
K G+ P T VL E+EEE K LR HSEKLAI+FGL+ T L + KNLR+C +CH
Sbjct: 646 EKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCH 705
Query: 910 NAAKLISKVAEREIVIRDNKRFHHFRDGVCSCGD 943
A KLISK+ +REI+ RD RFHHFRDGVCSC D
Sbjct: 706 EATKLISKIYKREIIARDRTRFHHFRDGVCSCND 739
Score = 199 bits (506), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 148/513 (28%), Positives = 252/513 (49%), Gaps = 56/513 (10%)
Query: 15 LSLSAKTNNASTEGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGH 74
LS S T +S+ HFL + +S + +LSLL HN ++ ++ H
Sbjct: 3 LSCSPLTVPSSSYPFHFLPSSSDPPYDSIRNHPSLSLL----HNCKTLQSLRII-----H 53
Query: 75 EKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNA 134
+ I+IG +H +T ++ +I +++ + G P + VF +++ NL WN
Sbjct: 54 AQMIKIG--LH-----NTNYALSKLIEFCILSPH-FEGLPY-AISVFKTIQEPNLLIWNT 104
Query: 135 LVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKM 194
+ G + L ++V ++S L P+++TFP V+K+C G +HG K+
Sbjct: 105 MFRGHALSSDPVSALKLYVCMIS-LGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKL 163
Query: 195 GLIGDVFVSNALIAM-------------------------------YGKCAFVEEMVKLF 223
G D++V +LI+M Y ++E KLF
Sbjct: 164 GCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLF 223
Query: 224 EVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGN 283
+ +P +++VSWN++I G +E G E+ +L MM + PD +T+VTV+ CA G+
Sbjct: 224 DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM--KTNVRPDESTMVTVVSACAQSGS 281
Query: 284 VDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGA 343
++LG VH G L + NAL+D+Y+KCG L A LF++ K+V+SWNT+IG
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341
Query: 344 FSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRH--G 401
++ L ++M E PN+VT+L++L +C+ + + +H Y + G
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGE--TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKG 399
Query: 402 FDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFL 461
N + + + YAKCG +A VF+ + +++SSWNA+I G+A +G + D F
Sbjct: 400 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFS 459
Query: 462 QMTHSDLEPDLFSIGSLILACTHLKSLHRGKEI 494
+M ++PD + L+ AC+H L G+ I
Sbjct: 460 RMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 215/444 (48%), Gaps = 40/444 (9%)
Query: 187 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM---VKLFEVMPERNLVSWNSIICGSSE 243
+H K+GL + + LI E + + +F+ + E NL+ WN++ G +
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 244 NGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTREL 303
+ + L + M+ G +P+ T VL CA G +HG +KLG +L
Sbjct: 112 SSDPVSALKLYVCMISL--GLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 169
Query: 304 MVNNALVDMY-------------------------------AKCGFLSEAQILFDKNNNK 332
V+ +L+ MY A G++ AQ LFD+ K
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229
Query: 333 NVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKE 392
+VVSWN +I ++ G+ +L + M + ++P+E T++ V+++C++ + ++
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMM--KTNVRPDESTMVTVVSACAQSGSIELGRQ 287
Query: 393 LHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGD 452
+H + HGF ++ + NA + Y+KCG +A +F + + V SWN LI GY
Sbjct: 288 VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNL 347
Query: 453 HLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIR--NGLEGDSFTG 510
+ +AL F +M S P+ ++ S++ AC HL ++ G+ IH ++ + G+ S
Sbjct: 348 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 407
Query: 511 ISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQ 570
SL+ +Y C +A +F+ + KSL SWN MI G++ + + LF RM IG+Q
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 467
Query: 571 PCEISIVSILSACSQLSALRLGKE 594
P +I+ V +LSACS L LG+
Sbjct: 468 PDDITFVGLLSACSHSGMLDLGRH 491
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 148/307 (48%), Gaps = 39/307 (12%)
Query: 477 SLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLS---LYMHCEKSSSARVLFDEM 533
SL+ C L+SL + IH +I+ GL ++ L+ L H E A +F +
Sbjct: 38 SLLHNCKTLQSL---RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 94
Query: 534 EDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGK 593
++ +L+ WNTM G++ + PV A+ L+ M S+G+ P + +L +C++ A + G+
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154
Query: 594 ETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDR-------------------- 633
+ H + LK D +V S+I MY + G LE + +VFD+
Sbjct: 155 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 214
Query: 634 -----------LKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILM 682
+ KDV SWNA+I G+ G KEA+ELF+ M+ +PD T V ++
Sbjct: 215 YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVS 274
Query: 683 ACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADA 742
AC +G +E G + + H L+ ++D+ + G+L+ A L +P + D
Sbjct: 275 ACAQSGSIELGRQVHLWIDD-HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-DV 332
Query: 743 GIWSSLL 749
W++L+
Sbjct: 333 ISWNTLI 339
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 457 bits (1177), Expect = e-127, Method: Compositional matrix adjust.
Identities = 273/832 (32%), Positives = 452/832 (54%), Gaps = 53/832 (6%)
Query: 25 STEGLHFLQEITTLCEESKSLNKALSLLQE-NLHNADL-KEATGVLLQACGHEKDIEIGK 82
S + +++LC+ + + +ALSL+ E + N + E G +LQ C +E+D+ GK
Sbjct: 32 SPSSTSYFHRVSSLCKNGE-IKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGK 90
Query: 83 RVHELISASTQF-SNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTK 141
++H I + F + + I T+L+ Y+ C + +F L+ RN+F W A++ +
Sbjct: 91 QIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCR 150
Query: 142 NELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVF 201
L L FVE+L + E+ PDNF P V KACG + FG GVHG K GL VF
Sbjct: 151 IGLCEGALMGFVEML-ENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVF 209
Query: 202 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCE 261
V+++L MYGKC +++ K+F+ +P+RN V+WN+++ G +NG + E+ L M +
Sbjct: 210 VASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMR--K 267
Query: 262 EGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSE 321
+G P TV T L A G V+ G H +A+ G+ + ++ +L++ Y K G +
Sbjct: 268 QGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEY 327
Query: 322 AQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSC 381
A+++FD+ K+VV+WN II + G V + + M++ E++K + VT+ ++++
Sbjct: 328 AEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRL--EKLKYDCVTLATLMSAA 385
Query: 382 SEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWN 441
+ L KE+ Y +RH F++D ++A+ + YAKCGS + A+ VF + + WN
Sbjct: 386 ARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWN 445
Query: 442 ALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRN 501
L+ YA++G +AL F M + P++ + +IL+ ++RN
Sbjct: 446 TLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILS----------------LLRN 489
Query: 502 GLEGDSFTGISLLSLYMHCEKSSSARVLFDEMED----KSLVSWNTMIAGYSQNKLPVEA 557
G + A+ +F +M+ +L+SW TM+ G QN EA
Sbjct: 490 G-------------------QVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEA 530
Query: 558 IVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVA--CSII 615
I+ R+M G++P SI LSAC+ L++L +G+ H Y ++ L + + V+ S++
Sbjct: 531 ILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRN-LQHSSLVSIETSLV 589
Query: 616 DMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTF 675
DMYAKCG + ++ +VF ++ NA+I + ++G KEAI L+ + +G KPD
Sbjct: 590 DMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNI 649
Query: 676 TFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIE 735
T +L ACNHAG + ++ F+ + ++KP LEHY +VD+L AG+ + A +LI E
Sbjct: 650 TITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEE 709
Query: 736 MPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDV 795
MP + DA + SL+ SC ++ + +++ LLE EP+ + NYV +SN YA WD+V
Sbjct: 710 MPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEV 769
Query: 796 RMMRQRMKERGLQKEAGCSWIELGG--NIHSFVVGDNMHPEWEEIRGMWGRL 845
MR+ MK +GL+K+ GCSWI++ G +H FV D H EI+ M L
Sbjct: 770 VKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALL 821
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust.
Identities = 248/739 (33%), Positives = 411/739 (55%), Gaps = 10/739 (1%)
Query: 115 LDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKA 174
L + V ++KT L N ++ K+ Y + L F ++ K T+ +I A
Sbjct: 19 LATSSVVSTIKTEELM--NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICA 76
Query: 175 CGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSW 234
C ++ G +H D ++N +++MYGKC + + ++F+ MPERNLVS+
Sbjct: 77 CSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSY 136
Query: 235 NSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLA 294
S+I G S+NG E+ L +KM+ +E +PD +++ CA +V LG +H
Sbjct: 137 TSVITGYSQNGQGAEAIRLYLKML--QEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQV 194
Query: 295 VKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTF 354
+KL + L+ NAL+ MY + +S+A +F K+++SW++II FS G
Sbjct: 195 IKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEAL 254
Query: 355 DLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVV 414
L++M + PNE + L +CS ++HG ++ + + +
Sbjct: 255 SHLKEM-LSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCD 313
Query: 415 AYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFS 474
YA+CG SA VF ++ +SWN +I G A NG +A+ F QM S PD S
Sbjct: 314 MYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAIS 373
Query: 475 IGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEME 534
+ SL+ A T +L +G +IH ++I+ G D SLL++Y C LF++
Sbjct: 374 LRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFR 433
Query: 535 DKS-LVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGK 593
+ + VSWNT++ Q++ PVE + LF+ M +P I++ ++L C ++S+L+LG
Sbjct: 434 NNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGS 493
Query: 594 ETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHG 653
+ HCY+LK L + F+ +IDMYAKCG L Q+RR+FD + ++DV SW+ +I G+ G
Sbjct: 494 QVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSG 553
Query: 654 YGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHY 713
+G+EA+ LF++M + G +P+ TFVG+L AC+H GLVE GLK ++ MQ H + P EH
Sbjct: 554 FGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHC 613
Query: 714 ACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEP 773
+CVVD+L RAG+L++A + I EM E D +W +LL +C+T G + + +K A+ +L+++P
Sbjct: 614 SCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDP 673
Query: 774 DKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGCSWIELGGNIHSFVVGDNMHP 833
+ +VL+ +++A S W++ ++R MK+ ++K G SWIE+ IH F D HP
Sbjct: 674 FNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHP 733
Query: 834 EWEEI----RGMWGRLEEQ 848
E ++I +W ++ ++
Sbjct: 734 ERDDIYTVLHNIWSQMLDE 752
Score = 306 bits (784), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 198/696 (28%), Positives = 345/696 (49%), Gaps = 26/696 (3%)
Query: 68 LLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 127
L+ AC + + G+++H+ I ++ D I+N +++MY CG D+R VFD + R
Sbjct: 73 LICACSSSRSLAQGRKIHDHI-LNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 131
Query: 128 NLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGV 187
NL + ++++G+++N + + +++++L + +L PD F F +IKAC +DV G +
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQE-DLVPDQFAFGSIIKACASSSDVGLGKQL 190
Query: 188 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFS 247
H K+ + NALIAMY + + + ++F +P ++L+SW+SII G S+ GF
Sbjct: 191 HAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFE 250
Query: 248 CESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNN 307
E+ L +M+ F P+ + L C+ D G +HGL +K L +
Sbjct: 251 FEALSHLKEMLSFGV-FHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGC 309
Query: 308 ALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEM 367
+L DMYA+CGFL+ A+ +FD+ + SWN II + G + QM+
Sbjct: 310 SLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFS--QMRSSGF 367
Query: 368 KPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAEN 427
P+ +++ ++L + ++ L ++H Y ++ GF D V N+ + Y C N
Sbjct: 368 IPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFN 427
Query: 428 VFHGMDSRTVS-SWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLK 486
+F + S SWN ++ Q+ ++ L F M S+ EPD ++G+L+ C +
Sbjct: 428 LFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEIS 487
Query: 487 SLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIA 546
SL G ++H + ++ GL + F L+ +Y C AR +FD M+++ +VSW+T+I
Sbjct: 488 SLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIV 547
Query: 547 GYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTN 606
GY+Q+ EA++LF+ M S G++P ++ V +L+ACS + + G + + +
Sbjct: 548 GYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGIS 607
Query: 607 DAFVACS-IIDMYAKCGCLEQSRRVFDRLK-DKDVTSWNAIIGGHGIHGYGKEAIELFEK 664
CS ++D+ A+ G L ++ R D +K + DV W ++ G A + E
Sbjct: 608 PTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAEN 667
Query: 665 MLALGHKPDTFTFVGILMACN-HA--GLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLG 721
+L K D F ++ C+ HA G EN S M+K K + + + D
Sbjct: 668 IL----KIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIED--- 720
Query: 722 RAGKLDDAFKLIIEMPEEADA-----GIWSSLLRSC 752
K+ F I PE D IWS +L C
Sbjct: 721 ---KIHIFFAEDIFHPERDDIYTVLHNIWSQMLDEC 753
Score = 233 bits (593), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 148/502 (29%), Positives = 252/502 (50%), Gaps = 10/502 (1%)
Query: 49 LSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMY 108
L +LQE+L A G +++AC D+ +GK++H + + S+ I LI MY
Sbjct: 157 LKMLQEDLVPDQF--AFGSIIKACASSSDVGLGKQLHAQV-IKLESSSHLIAQNALIAMY 213
Query: 109 SLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTF 168
D+ RVF + ++L W+++++GF++ + LS E+LS P+ + F
Sbjct: 214 VRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIF 273
Query: 169 PCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPE 228
+KAC + +GS +HG+ K L G+ +L MY +C F+ ++F+ +
Sbjct: 274 GSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIER 333
Query: 229 RNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGI 288
+ SWN II G + NG++ E+ + +M GFIPD ++ ++L + G+
Sbjct: 334 PDTASWNVIIAGLANNGYADEAVSVFSQMRS--SGFIPDAISLRSLLCAQTKPMALSQGM 391
Query: 289 LVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILF-DKNNNKNVVSWNTIIGAFSMA 347
+H +K G +L V N+L+ MY C L LF D NN + VSWNTI+ A
Sbjct: 392 QIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Query: 348 GDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDEL 407
L + M + E E P+ +T+ N+L C E S L ++H YSL+ G ++
Sbjct: 452 EQPVEMLRLFKLMLVSECE--PDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQF 509
Query: 408 VANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSD 467
+ N + YAKCGS A +F MD+R V SW+ LI GYAQ+G +AL F +M +
Sbjct: 510 IKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAG 569
Query: 468 LEPDLFSIGSLILACTHLKSLHRGKEIHGFV-IRNGLEGDSFTGISLLSLYMHCEKSSSA 526
+EP+ + ++ AC+H+ + G +++ + +G+ ++ L + + A
Sbjct: 570 IEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEA 629
Query: 527 RVLFDEME-DKSLVSWNTMIAG 547
DEM+ + +V W T+++
Sbjct: 630 ERFIDEMKLEPDVVVWKTLLSA 651
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 456 bits (1174), Expect = e-127, Method: Compositional matrix adjust.
Identities = 251/690 (36%), Positives = 383/690 (55%), Gaps = 36/690 (5%)
Query: 290 VHGLAVKLGLTRELMVNNALVDMYAKCGF--LSEAQILFDKNNNKNVVSWNTIIGAFSMA 347
HG ++ G + + L M A F L A+ +FD+ N +WNT+I A++
Sbjct: 49 THGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASG 108
Query: 348 GDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDEL 407
D + M + E + PN+ T ++ + +E S L + LHG +++ +D
Sbjct: 109 PDPVLSIWAFLDM-VSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVF 167
Query: 408 VANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSD 467
VAN+ + Y CG SA VF + + V SWN++I G+ Q G KAL+ F +M D
Sbjct: 168 VANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESED 227
Query: 468 LEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSAR 527
++ ++ ++ AC +++L G+++ ++ N + + ++L +Y C A+
Sbjct: 228 VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAK 287
Query: 528 VLFDEMEDKSLVSWNTMIAGYS-------------------------------QNKLPVE 556
LFD ME+K V+W TM+ GY+ QN P E
Sbjct: 288 RLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNE 347
Query: 557 AIVLFRRM-FSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSII 615
A+++F + ++ +I++VS LSAC+Q+ AL LG+ H Y K + + V ++I
Sbjct: 348 ALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALI 407
Query: 616 DMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTF 675
MY+KCG LE+SR VF+ ++ +DV W+A+IGG +HG G EA+++F KM KP+
Sbjct: 408 HMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGV 467
Query: 676 TFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIE 735
TF + AC+H GLV+ F QM+ + + P+ +HYAC+VD+LGR+G L+ A K I
Sbjct: 468 TFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEA 527
Query: 736 MPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDV 795
MP +W +LL +C+ + L + E LLELEP +VL+SNIYA KW++V
Sbjct: 528 MPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENV 587
Query: 796 RMMRQRMKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQISKIGYK 855
+R+ M+ GL+KE GCS IE+ G IH F+ GDN HP E++ G + E++ GY+
Sbjct: 588 SELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYE 647
Query: 856 PYTEAVLHELEEEE-KVNILRGHSEKLAISFGLLKTTKDLTLRVCKNLRICVDCHNAAKL 914
P VL +EEEE K L HSEKLAI +GL+ T +RV KNLR+C DCH+ AKL
Sbjct: 648 PEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKL 707
Query: 915 ISKVAEREIVIRDNKRFHHFRDGVCSCGDI 944
IS++ +REI++RD RFHHFR+G CSC D
Sbjct: 708 ISQLYDREIIVRDRYRFHHFRNGQCSCNDF 737
Score = 207 bits (528), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 128/438 (29%), Positives = 228/438 (52%), Gaps = 41/438 (9%)
Query: 82 KRVHELISASTQFSNDFIINTRLITMYSLCGFPL--DSRRVFDSLKTRNLFQWNALVSGF 139
K+ H + + FS+ + ++L M +L F +R+VFD + N F WN L+ +
Sbjct: 47 KQTHGHMIRTGTFSDPYSA-SKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAY 105
Query: 140 TKNELYPD-VLSI--FVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGL 196
PD VLSI F++++S+++ P+ +TFP +IKA ++ +S G +HGMA K +
Sbjct: 106 ASG---PDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAV 162
Query: 197 IGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIK 256
DVFV+N+LI Y C ++ K+F + E+++VSWNS+I G + G ++ +L K
Sbjct: 163 GSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKK 222
Query: 257 MMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKC 316
M E T+V VL CA N++ G V + + L + NA++DMY KC
Sbjct: 223 MES--EDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKC 280
Query: 317 GFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMK------------- 363
G + +A+ LFD K+ V+W T++ ++++ D ++L M K
Sbjct: 281 GSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYE 340
Query: 364 -----------------EEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDE 406
++ MK N++T+++ L++C++ L + +H Y +HG +
Sbjct: 341 QNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNF 400
Query: 407 LVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHS 466
V +A + Y+KCG + VF+ ++ R V W+A+I G A +G +A+D F +M +
Sbjct: 401 HVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEA 460
Query: 467 DLEPDLFSIGSLILACTH 484
+++P+ + ++ AC+H
Sbjct: 461 NVKPNGVTFTNVFCACSH 478
Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 197/405 (48%), Gaps = 37/405 (9%)
Query: 387 LLSLKELHGYSLRHGFDNDELVANAF--VVAYAKCGSEISAENVFHGMDSRTVSSWNALI 444
L LK+ HG+ +R G +D A+ + A + S A VF + +WN LI
Sbjct: 43 LRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLI 102
Query: 445 CGYAQNGDHLKALDYFLQM-THSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGL 503
YA D + ++ FL M + S P+ ++ LI A + SL G+ +HG +++ +
Sbjct: 103 RAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAV 162
Query: 504 EGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRR 563
D F SL+ Y C SA +F +++K +VSWN+MI G+ Q P +A+ LF++
Sbjct: 163 GSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKK 222
Query: 564 MFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGC 623
M S V+ +++V +LSAC+++ L G++ Y + + + +A +++DMY KCG
Sbjct: 223 MESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGS 282
Query: 624 LEQSRRVFDRLKD-------------------------------KDVTSWNAIIGGHGIH 652
+E ++R+FD +++ KD+ +WNA+I + +
Sbjct: 283 IEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQN 342
Query: 653 GYGKEAIELFEKM-LALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLE 711
G EA+ +F ++ L K + T V L AC G +E G S ++K H ++
Sbjct: 343 GKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK-HGIRMNFH 401
Query: 712 HYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYG 756
+ ++ M + G L+ + + + E+ D +WS+++ +G
Sbjct: 402 VTSALIHMYSKCGDLEKS-REVFNSVEKRDVFVWSAMIGGLAMHG 445
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 148/276 (53%), Gaps = 8/276 (2%)
Query: 477 SLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSS--SARVLFDEME 534
SLI C L+ L K+ HG +IR G D ++ L ++ +S AR +FDE+
Sbjct: 35 SLIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIP 91
Query: 535 DKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIG-VQPCEISIVSILSACSQLSALRLGK 593
+ +WNT+I Y+ PV +I F M S P + + ++ A +++S+L LG+
Sbjct: 92 KPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQ 151
Query: 594 ETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHG 653
H A+K+ + +D FVA S+I Y CG L+ + +VF +K+KDV SWN++I G G
Sbjct: 152 SLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG 211
Query: 654 YGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHY 713
+A+ELF+KM + K T VG+L AC +E G + S +++ + V L
Sbjct: 212 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEE-NRVNVNLTLA 270
Query: 714 ACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLL 749
++DM + G ++DA +L M EE D W+++L
Sbjct: 271 NAMLDMYTKCGSIEDAKRLFDAM-EEKDNVTWTTML 305
Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 98/193 (50%), Gaps = 8/193 (4%)
Query: 40 EESKSLNKALSLLQE-NLH-NADLKEATGV-LLQACGHEKDIEIGKRVHELISASTQFSN 96
E++ N+AL + E L N L + T V L AC +E+G+ +H I N
Sbjct: 340 EQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMN 399
Query: 97 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELL 156
F + + LI MYS CG SR VF+S++ R++F W+A++ G + + + +F ++
Sbjct: 400 -FHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM- 457
Query: 157 SDTELKPDNFTFPCVIKACG--GIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 214
+ +KP+ TF V AC G+ D + S H M + G++ + ++ + G+
Sbjct: 458 QEANVKPNGVTFTNVFCACSHTGLVDEA-ESLFHQMESNYGIVPEEKHYACIVDVLGRSG 516
Query: 215 FVEEMVKLFEVMP 227
++E+ VK E MP
Sbjct: 517 YLEKAVKFIEAMP 529
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 454 bits (1168), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/537 (41%), Positives = 335/537 (62%), Gaps = 5/537 (0%)
Query: 407 LVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHS 466
+ N + Y K A +F M R V SW +I Y++ H KAL+ + M
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 467 DLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSA 526
++ P++++ S++ +C + + + +H +I+ GLE D F +L+ ++ + A
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213
Query: 527 RVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQL 586
+FDEM + WN++I G++QN A+ LF+RM G + ++ S+L AC+ L
Sbjct: 214 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 587 SALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAII 646
+ L LG + H + +K D + +++DMY KCG LE + RVF+++K++DV +W+ +I
Sbjct: 274 ALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMI 331
Query: 647 GGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAV 706
G +GY +EA++LFE+M + G KP+ T VG+L AC+HAGL+E+G YF M+KL+ +
Sbjct: 332 SGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGI 391
Query: 707 KPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYGALKMGEKVAK 766
P EHY C++D+LG+AGKLDDA KL+ EM E DA W +LL +CR + + E AK
Sbjct: 392 DPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAK 451
Query: 767 TLLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGCSWIELGGNIHSFV 826
++ L+P+ A Y L+SNIYA S+KWD V +R RM++RG++KE GCSWIE+ IH+F+
Sbjct: 452 KVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFI 511
Query: 827 VGDNMHPEWEEIRGMWGRLEEQISKIGYKPYTEAVLHELEEEEKVNILRGHSEKLAISFG 886
+GDN HP+ E+ +L +++ IGY P T VL +LE E+ + LR HSEKLA++FG
Sbjct: 512 IGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFG 571
Query: 887 LLKTTKDLTLRVCKNLRICVDCHNAAKLISKVAEREIVIRDNKRFHHFRDGVCSCGD 943
L+ + +R+ KNLRIC DCH KL SK+ R IVIRD R+HHF+DG CSCGD
Sbjct: 572 LMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGD 628
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 202/388 (52%), Gaps = 21/388 (5%)
Query: 17 LSAKTNNASTEGLHFLQEITTLCEES--KSLNKALSLLQENLHNADLKEATGVLLQACGH 74
++ + + +ST+ L E T LC + KA+ LQ + AD L++ C
Sbjct: 15 VTLRCSYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWAD-SATYSELIKCCIS 73
Query: 75 EKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNA 134
+ + G + + + F++N LI MY D+ ++FD + RN+ W
Sbjct: 74 NRAVHEGNLICRHLYFNGHRPMMFLVNV-LINMYVKFNLLNDAHQLFDQMPQRNVISWTT 132
Query: 135 LVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKM 194
++S ++K +++ L + V +L D ++P+ +T+ V+++C G++DV +H K
Sbjct: 133 MISAYSKCKIHQKALELLVLMLRDN-VRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKE 188
Query: 195 GLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLL 254
GL DVFV +ALI ++ K E+ + +F+ M + + WNSII G ++N S + +L
Sbjct: 189 GLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELF 248
Query: 255 IKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYA 314
+M GFI + AT+ +VL C G ++LG+ H VK ++L++NNALVDMY
Sbjct: 249 KRMK--RAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYC 304
Query: 315 KCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTV 374
KCG L +A +F++ ++V++W+T+I + G L + MK KPN +T+
Sbjct: 305 KCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFER--MKSSGTKPNYITI 362
Query: 375 LNVLTSCSEKSEL-------LSLKELHG 395
+ VL +CS L S+K+L+G
Sbjct: 363 VGVLFACSHAGLLEDGWYYFRSMKKLYG 390
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 194/397 (48%), Gaps = 27/397 (6%)
Query: 161 LKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 220
L D+ T+ +IK C V G+ + G +F+ N LI MY K + +
Sbjct: 57 LWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAH 116
Query: 221 KLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAG 280
+LF+ MP+RN++SW ++I S+ ++ +LL+ M+ + P+V T +VL C G
Sbjct: 117 QLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLML--RDNVRPNVYTYSSVLRSCNG 174
Query: 281 EGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTI 340
+V + +H +K GL ++ V +AL+D++AK G +A +FD+ + + WN+I
Sbjct: 175 MSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 231
Query: 341 IGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRH 400
IG F+ +L ++M K + T+ +VL +C+ L+L EL + H
Sbjct: 232 IGGFAQNSRSDVALELFKRM--KRAGFIAEQATLTSVLRACTG----LALLELGMQAHVH 285
Query: 401 --GFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALD 458
+D D ++ NA V Y KCGS A VF+ M R V +W+ +I G AQNG +AL
Sbjct: 286 IVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALK 345
Query: 459 YFLQMTHSDLEPDLFSIGSLILACTHLKSLHRG-------KEIHGFVIRNGLEGDSFTGI 511
F +M S +P+ +I ++ AC+H L G K+++G G
Sbjct: 346 LFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYG------ 399
Query: 512 SLLSLYMHCEKSSSARVLFDEME-DKSLVSWNTMIAG 547
++ L K A L +EME + V+W T++
Sbjct: 400 CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 179/373 (47%), Gaps = 31/373 (8%)
Query: 454 LKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISL 513
+KA+D + L D + LI C +++H G I + NG F L
Sbjct: 46 MKAMD---SLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVL 102
Query: 514 LSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCE 573
+++Y+ + A LFD+M ++++SW TMI+ YS+ K+ +A+ L M V+P
Sbjct: 103 INMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNV 162
Query: 574 ISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDR 633
+ S+L +C+ +S +R+ HC +K L +D FV ++ID++AK G E + VFD
Sbjct: 163 YTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 634 LKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENG 693
+ D WN+IIGG + A+ELF++M G + T +L AC L+E G
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279
Query: 694 LKYFSQMQKLHAVK--PKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRS 751
++ +H VK L +VDM + G L+DA ++ +M +E D WS+++
Sbjct: 280 MQ-----AHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQM-KERDVITWSTMISG 333
Query: 752 CRTYG----ALKMGEKVAKTLLELEPDKAENYVLVSNI-----YAG--SEKWDDVRMMRQ 800
G ALK+ E++ + NY+ + + +AG + W R M++
Sbjct: 334 LAQNGYSQEALKLFERMKSS------GTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKK 387
Query: 801 RMKERGLQKEAGC 813
+++ GC
Sbjct: 388 LYGIDPVREHYGC 400
Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 130/252 (51%), Gaps = 7/252 (2%)
Query: 94 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFV 153
+D + + LI +++ G P D+ VFD + T + WN+++ GF +N L +F
Sbjct: 190 LESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELF- 248
Query: 154 ELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 213
+ + + T V++AC G+A + G H K D+ ++NAL+ MY KC
Sbjct: 249 KRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKC 306
Query: 214 AFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVT 273
+E+ +++F M ER++++W+++I G ++NG+S E+ L +M G P+ T+V
Sbjct: 307 GSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKS--SGTKPNYITIVG 364
Query: 274 VLPVCAGEGNVDLGILVHGLAVKL-GLTRELMVNNALVDMYAKCGFLSEA-QILFDKNNN 331
VL C+ G ++ G KL G+ ++D+ K G L +A ++L +
Sbjct: 365 VLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECE 424
Query: 332 KNVVSWNTIIGA 343
+ V+W T++GA
Sbjct: 425 PDAVTWRTLLGA 436
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 6/173 (3%)
Query: 68 LLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 127
+L+AC +E+G + H I ++ D I+N L+ MY CG D+ RVF+ +K R
Sbjct: 266 VLRACTGLALLELGMQAHVHI---VKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER 322
Query: 128 NLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGV 187
++ W+ ++SG +N + L +F E + + KP+ T V+ AC + G
Sbjct: 323 DVITWSTMISGLAQNGYSQEALKLF-ERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYY 381
Query: 188 HGMAAKMGLIGDVFVS-NALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSII 238
K+ I V +I + GK +++ VKL M E + V+W +++
Sbjct: 382 FRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 452 bits (1163), Expect = e-126, Method: Compositional matrix adjust.
Identities = 254/745 (34%), Positives = 414/745 (55%), Gaps = 9/745 (1%)
Query: 97 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELL 156
D + +I Y G D+R +F + + ++ WN ++SG K + F +
Sbjct: 260 DHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNM- 318
Query: 157 SDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 216
+ +K T V+ A G +A++ G VH A K+GL +++V ++L++MY KC +
Sbjct: 319 RKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKM 378
Query: 217 EEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLP 276
E K+FE + E+N V WN++I G + NG S + +L + M G+ D T ++L
Sbjct: 379 EAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK--SSGYNIDDFTFTSLLS 436
Query: 277 VCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVS 336
CA ++++G H + +K L + L V NALVDMYAKCG L +A+ +F++ +++ V+
Sbjct: 437 TCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVT 496
Query: 337 WNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGY 396
WNTIIG++ + FDL ++M + + + + + L +C+ L K++H
Sbjct: 497 WNTIIGSYVQDENESEAFDLFKRMNLCG--IVSDGACLASTLKACTHVHGLYQGKQVHCL 554
Query: 397 SLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKA 456
S++ G D D ++ + Y+KCG A VF + +V S NALI GY+QN +A
Sbjct: 555 SVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EA 613
Query: 457 LDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDS-FTGISLLS 515
+ F +M + P + +++ AC +SL G + HG + + G + + GISLL
Sbjct: 614 VVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLG 673
Query: 516 LYMHCEKSSSARVLFDEMED-KSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEI 574
+YM+ + A LF E+ KS+V W M++G+SQN EA+ ++ M GV P +
Sbjct: 674 MYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQA 733
Query: 575 SIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRL 634
+ V++L CS LS+LR G+ H D + ++IDMYAKCG ++ S +VFD +
Sbjct: 734 TFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM 793
Query: 635 KDK-DVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENG 693
+ + +V SWN++I G+ +GY ++A+++F+ M PD TF+G+L AC+HAG V +G
Sbjct: 794 RRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDG 853
Query: 694 LKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCR 753
K F M + ++ +++H AC+VD+LGR G L +A I + DA +WSSLL +CR
Sbjct: 854 RKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACR 913
Query: 754 TYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGC 813
+G GE A+ L+ELEP + YVL+SNIYA W+ +R+ M++RG++K G
Sbjct: 914 IHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGY 973
Query: 814 SWIELGGNIHSFVVGDNMHPEWEEI 838
SWI++ H F GD H E +I
Sbjct: 974 SWIDVEQRTHIFAAGDKSHSEIGKI 998
Score = 283 bits (724), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 199/754 (26%), Positives = 352/754 (46%), Gaps = 61/754 (8%)
Query: 32 LQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELISAS 91
L +++ + K L +SL + + K ++L C E ++E G+++H +
Sbjct: 132 LSMYSSIGKPGKVLRSFVSLFENQIFPN--KFTFSIVLSTCARETNVEFGRQIHCSMIKM 189
Query: 92 TQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSI 151
N + L+ MY+ C D+RRVF+ + N W L SG+ K L + + +
Sbjct: 190 GLERNSY-CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLV 248
Query: 152 FVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYG 211
F E + D +PD+ F VI Y
Sbjct: 249 F-ERMRDEGHRPDHLAFVTVINT-----------------------------------YI 272
Query: 212 KCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATV 271
+ +++ LF M ++V+WN +I G + G + + M + +T+
Sbjct: 273 RLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMR--KSSVKSTRSTL 330
Query: 272 VTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNN 331
+VL N+DLG++VH A+KLGL + V ++LV MY+KC + A +F+
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE 390
Query: 332 KNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLK 391
KN V WN +I ++ G+ +L M MK ++ T ++L++C+ +L
Sbjct: 391 KNDVFWNAMIRGYAHNGESHKVMELF--MDMKSSGYNIDDFTFTSLLSTCAASHDLEMGS 448
Query: 392 ELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNG 451
+ H ++ + V NA V YAKCG+ A +F M R +WN +I Y Q+
Sbjct: 449 QFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDE 508
Query: 452 DHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGI 511
+ +A D F +M + D + S + ACTH+ L++GK++H ++ GL+ D TG
Sbjct: 509 NESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGS 568
Query: 512 SLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQP 571
SL+ +Y C AR +F + + S+VS N +IAGYSQN L EA+VLF+ M + GV P
Sbjct: 569 SLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNP 627
Query: 572 CEISIVSILSACSQLSALRLGKETHCYALKAILTNDA-FVACSIIDMYAKCGCLEQSRRV 630
EI+ +I+ AC + +L LG + H K +++ ++ S++ MY + ++ +
Sbjct: 628 SEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACAL 687
Query: 631 FDRLKD-KDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGL 689
F L K + W ++ GH +G+ +EA++ +++M G PD TFV +L C+
Sbjct: 688 FSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSS 747
Query: 690 VENGLKYFSQMQKLHAVKPKLEH------YACVVDMLGRAGKLDDAFKLIIEMPEEADAG 743
+ G + +H++ L H ++DM + G + + ++ EM ++
Sbjct: 748 LREG-------RAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVV 800
Query: 744 IWSSLLRSCRTYGALKMGEKVAKTLLE--LEPDK 775
W+SL+ G + K+ ++ + + PD+
Sbjct: 801 SWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDE 834
Score = 274 bits (701), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 178/625 (28%), Positives = 302/625 (48%), Gaps = 43/625 (6%)
Query: 78 IEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 137
+ IGK VH S ++ + ++ +Y+ C + + FD L+ +++ WN+++S
Sbjct: 76 LRIGKAVHSK-SLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLS 133
Query: 138 GFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLI 197
++ VL FV L + ++ P+ FTF V+ C +V FG +H KMGL
Sbjct: 134 MYSSIGKPGKVLRSFVSLF-ENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 198 GDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKM 257
+ + AL+ MY KC + + ++FE + + N V W + G + G E+ + +M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 258 MGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCG 317
+EG PD VTV ++ Y + G
Sbjct: 253 R--DEGHRPDHLAFVTV-----------------------------------INTYIRLG 275
Query: 318 FLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNV 377
L +A++LF + ++ +VV+WN +I G C T + M++ +K T+ +V
Sbjct: 276 KLKDARLLFGEMSSPDVVAWNVMISGHGKRG--CETVAIEYFFNMRKSSVKSTRSTLGSV 333
Query: 378 LTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTV 437
L++ + L +H +++ G ++ V ++ V Y+KC +A VF ++ +
Sbjct: 334 LSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND 393
Query: 438 SSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGF 497
WNA+I GYA NG+ K ++ F+ M S D F+ SL+ C L G + H
Sbjct: 394 VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSI 453
Query: 498 VIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEA 557
+I+ L + F G +L+ +Y C AR +F+ M D+ V+WNT+I Y Q++ EA
Sbjct: 454 IIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEA 513
Query: 558 IVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDM 617
LF+RM G+ + S L AC+ + L GK+ HC ++K L D S+IDM
Sbjct: 514 FDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDM 573
Query: 618 YAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTF 677
Y+KCG ++ +R+VF L + V S NA+I G+ + +EA+ LF++ML G P TF
Sbjct: 574 YSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITF 632
Query: 678 VGILMACNHAGLVENGLKYFSQMQK 702
I+ AC+ + G ++ Q+ K
Sbjct: 633 ATIVEACHKPESLTLGTQFHGQITK 657
Score = 245 bits (626), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 163/564 (28%), Positives = 271/564 (48%), Gaps = 59/564 (10%)
Query: 184 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSE 243
G VH + +G+ + + NA++ +Y KCA V K F+ + E+++ +WNS++ S
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSS 137
Query: 244 NGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTREL 303
G + + + E P+ T VL CA E NV+ G +H +K+GL R
Sbjct: 138 IGKPGKVLRSFVSLF--ENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNS 195
Query: 304 MVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAG---DVCGTFDLLRKM 360
ALVDMYAKC +S+A+ +F+ + N V W + + AG + F+
Sbjct: 196 YCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFE----- 250
Query: 361 QMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCG 420
+M++E +P+ + + V+ + Y + G
Sbjct: 251 RMRDEGHRPDHLAFVTVINT-----------------------------------YIRLG 275
Query: 421 SEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLIL 480
A +F M S V +WN +I G+ + G A++YF M S ++ ++GS++
Sbjct: 276 KLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
Query: 481 ACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVS 540
A + +L G +H I+ GL + + G SL+S+Y CEK +A +F+ +E+K+ V
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF 395
Query: 541 WNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYAL 600
WN MI GY+ N + + LF M S G + + S+LS C+ L +G + H +
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 601 KAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIE 660
K L + FV +++DMYAKCG LE +R++F+R+ D+D +WN IIG + EA +
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFD 515
Query: 661 LFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPK------LEHYA 714
LF++M G D L AC H +GL Q +++H + K L +
Sbjct: 516 LFKRMNLCGIVSDGACLASTLKACTHV----HGLY---QGKQVHCLSVKCGLDRDLHTGS 568
Query: 715 CVVDMLGRAGKLDDAFKLIIEMPE 738
++DM + G + DA K+ +PE
Sbjct: 569 SLIDMYSKCGIIKDARKVFSSLPE 592
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 173/325 (53%), Gaps = 16/325 (4%)
Query: 69 LQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 128
L+AC H + GK+VH +S D + LI MYS CG D+R+VF SL +
Sbjct: 536 LKACTHVHGLYQGKQVH-CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWS 594
Query: 129 LFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVH 188
+ NAL++G+++N L V+ +F E+L+ + P TF +++AC ++ G+ H
Sbjct: 595 VVSMNALIAGYSQNNLEEAVV-LFQEMLT-RGVNPSEITFATIVEACHKPESLTLGTQFH 652
Query: 189 GMAAKMGLIGD-VFVSNALIAMYGKCAFVEEMVKLF-EVMPERNLVSWNSIICGSSENGF 246
G K G + ++ +L+ MY + E LF E+ +++V W ++ G S+NGF
Sbjct: 653 GQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGF 712
Query: 247 SCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVN 306
E+ +M +G +PD AT VTVL VC+ ++ G +H L L + + +
Sbjct: 713 YEEALKFYKEMR--HDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTS 770
Query: 307 NALVDMYAKCGFLSEAQILFDKNNNK-NVVSWNTIIGAFSMAG---DVCGTFDLLRKMQM 362
N L+DMYAKCG + + +FD+ + NVVSWN++I ++ G D FD M
Sbjct: 771 NTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFD-----SM 825
Query: 363 KEEEMKPNEVTVLNVLTSCSEKSEL 387
++ + P+E+T L VLT+CS ++
Sbjct: 826 RQSHIMPDEITFLGVLTACSHAGKV 850
Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 171/360 (47%), Gaps = 38/360 (10%)
Query: 391 KELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQN 450
K +H SL G D++ + NA V YAKC AE F ++ + V++WN+++ Y+
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSI 138
Query: 451 GDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTG 510
G K L F+ + + + P+ F+ ++ C ++ G++IH +I+ GLE +S+ G
Sbjct: 139 GKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCG 198
Query: 511 ISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQ 570
+L+ +Y C++ S AR +F+ + D + V W + +GY + LP EA+++F RM G +
Sbjct: 199 GALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHR 258
Query: 571 PCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRV 630
P ++ V ++I+ Y + G L+ +R +
Sbjct: 259 PDHLAFV-----------------------------------TVINTYIRLGKLKDARLL 283
Query: 631 FDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLV 690
F + DV +WN +I GHG G AIE F M K T +L A +
Sbjct: 284 FGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANL 343
Query: 691 ENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLR 750
+ GL ++ KL + + + +V M + K++ A K + E EE + W++++R
Sbjct: 344 DLGLVVHAEAIKL-GLASNIYVGSSLVSMYSKCEKMEAAAK-VFEALEEKNDVFWNAMIR 401
Score = 119 bits (299), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 146/306 (47%), Gaps = 17/306 (5%)
Query: 487 SLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIA 546
+L GK +H + G++ + G +++ LY C + S A FD +E K + +WN+M++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLS 133
Query: 547 GYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTN 606
YS P + + F +F + P + + +LS C++ + + G++ HC +K L
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 607 DAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKML 666
+++ +++DMYAKC + +RRVF+ + D + W + G+ G +EA+ +FE+M
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 667 ALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKL 726
GH+PD FV ++ G +++ F +M P + + ++ G+ G
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRGCE 308
Query: 727 DDAFKLIIEMPEEADAGIWSSL---LRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVS 783
A + M + + S+L L + L +G V ++L L S
Sbjct: 309 TVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG--------LAS 360
Query: 784 NIYAGS 789
NIY GS
Sbjct: 361 NIYVGS 366
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 253/765 (33%), Positives = 414/765 (54%), Gaps = 18/765 (2%)
Query: 97 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELL 156
D ++ LI +YS G + +R+VF+ + RNL W+ +VS + +Y + L +F+E
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137
Query: 157 SDTELKPDNFTFPCVIKACGGIADVSFGSG------VHGMAAKMGLIGDVFVSNALIAMY 210
+ P+ + I+AC G+ G G + K G DV+V LI Y
Sbjct: 138 RTRKDSPNEYILSSFIQACSGLD----GRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFY 193
Query: 211 GKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVAT 270
K ++ +F+ +PE++ V+W ++I G + G S S L ++M E+ +PD
Sbjct: 194 LKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM--EDNVVPDGYI 251
Query: 271 VVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNN 330
+ TVL C+ ++ G +H ++ GL + + N L+D Y KCG + A LF+
Sbjct: 252 LSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP 311
Query: 331 NKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSL 390
NKN++SW T++ + +L M + +KP+ ++LTSC+ L
Sbjct: 312 NKNIISWTTLLSGYKQNALHKEAMELF--TSMSKFGLKPDMYACSSILTSCASLHALGFG 369
Query: 391 KELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQN 450
++H Y+++ ND V N+ + YAKC A VF + V +NA+I GY++
Sbjct: 370 TQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRL 429
Query: 451 GDHLK---ALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDS 507
G + AL+ F M + P L + SL+ A L SL K+IHG + + GL D
Sbjct: 430 GTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDI 489
Query: 508 FTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSI 567
F G +L+ +Y +C +R++FDEM+ K LV WN+M AGY Q EA+ LF +
Sbjct: 490 FAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLS 549
Query: 568 GVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQS 627
+P E + ++++A L++++LG+E HC LK L + ++ +++DMYAKCG E +
Sbjct: 550 RERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDA 609
Query: 628 RRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHA 687
+ FD +DV WN++I + HG GK+A+++ EKM++ G +P+ TFVG+L AC+HA
Sbjct: 610 HKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHA 669
Query: 688 GLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSS 747
GLVE+GLK F M + ++P+ EHY C+V +LGRAG+L+ A +LI +MP + A +W S
Sbjct: 670 GLVEDGLKQFELMLRF-GIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRS 728
Query: 748 LLRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGL 807
LL C G +++ E A+ + +P + ++ ++SNIYA W + + +R+RMK G+
Sbjct: 729 LLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGV 788
Query: 808 QKEAGCSWIELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQISKI 852
KE G SWI + +H F+ D H + +I + L QI +
Sbjct: 789 VKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIRGV 833
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 260/743 (34%), Positives = 396/743 (53%), Gaps = 65/743 (8%)
Query: 204 NALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSEN---GFSCESFDLLIKMMGC 260
N +I+ Y + E KLF+ MPER+LVSWN +I G N G + E F+++ +
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPER--- 155
Query: 261 EEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLS 320
DV + T+L A G VD V + + + NAL+ Y + +
Sbjct: 156 ------DVCSWNTMLSGYAQNGCVDDARSVFDRMPE----KNDVSWNALLSAYVQNSKME 205
Query: 321 EAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTS 380
EA +LF N +VSWN ++G F + M +++ V+ ++T
Sbjct: 206 EACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDV------VSWNTIITG 259
Query: 381 CSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSW 440
++ ++ ++L S D A V Y + A +F M R SW
Sbjct: 260 YAQSGKIDEARQLFDESPVQ----DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSW 315
Query: 441 NALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIR 500
NA++ GY Q G+ + ++ +LF + + C ++ + +
Sbjct: 316 NAMLAGYVQ-GERM------------EMAKELFDV----MPCRNVSTWN----------- 347
Query: 501 NGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVL 560
++++ Y C K S A+ LFD+M + VSW MIAGYSQ+ EA+ L
Sbjct: 348 -----------TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRL 396
Query: 561 FRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAK 620
F +M G + S S LS C+ + AL LGK+ H +K FV +++ MY K
Sbjct: 397 FVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCK 456
Query: 621 CGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGI 680
CG +E++ +F + KD+ SWN +I G+ HG+G+ A+ FE M G KPD T V +
Sbjct: 457 CGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAV 516
Query: 681 LMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEA 740
L AC+H GLV+ G +YF M + + V P +HYAC+VD+LGRAG L+DA L+ MP E
Sbjct: 517 LSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEP 576
Query: 741 DAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQ 800
DA IW +LL + R +G ++ E A + +EP+ + YVL+SN+YA S +W DV +R
Sbjct: 577 DAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRV 636
Query: 801 RMKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQISKIGYKPYTEA 860
RM+++G++K G SWIE+ H+F VGD HPE +EI L+ ++ K GY T
Sbjct: 637 RMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSV 696
Query: 861 VLHELEEEEKVNILRGHSEKLAISFGLLKTTKDLTLRVCKNLRICVDCHNAAKLISKVAE 920
VLH++EEEEK ++R HSE+LA+++G+++ + +RV KNLR+C DCHNA K ++++
Sbjct: 697 VLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITG 756
Query: 921 REIVIRDNKRFHHFRDGVCSCGD 943
R I++RDN RFHHF+DG CSCGD
Sbjct: 757 RLIILRDNNRFHHFKDGSCSCGD 779
Score = 190 bits (483), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 144/561 (25%), Positives = 248/561 (44%), Gaps = 76/561 (13%)
Query: 117 SRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACG 176
+R++FD + R+L WN ++ G+ +N +F E+ P+
Sbjct: 114 ARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF-------EIMPER----------- 155
Query: 177 GIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 236
DV N +++ Y + V++ +F+ MPE+N VSWN+
Sbjct: 156 ----------------------DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNA 193
Query: 237 IICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVK 296
++ +N E +L K V C G V +V
Sbjct: 194 LLSAYVQNS-KMEEACMLFK----------SRENWALVSWNCLLGGFVKKKKIVEARQFF 242
Query: 297 LGLT-RELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFD 355
+ R+++ N ++ YA+ G + EA+ LFD++ ++V +W ++ + V +
Sbjct: 243 DSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARE 302
Query: 356 LLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFD----NDELVANA 411
L KM + NEV+ +L + + KEL FD + N
Sbjct: 303 LFDKMPER------NEVSWNAMLAGYVQGERMEMAKEL--------FDVMPCRNVSTWNT 348
Query: 412 FVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPD 471
+ YA+CG A+N+F M R SW A+I GY+Q+G +AL F+QM +
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLN 408
Query: 472 LFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFD 531
S S + C + +L GK++HG +++ G E F G +LL +Y C A LF
Sbjct: 409 RSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFK 468
Query: 532 EMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRL 591
EM K +VSWNTMIAGYS++ A+ F M G++P + ++V++LSACS +
Sbjct: 469 EMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDK 528
Query: 592 GKETHCYALK---AILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLK-DKDVTSWNAIIG 647
G++ + Y + ++ N AC ++D+ + G LE + + + + D W ++G
Sbjct: 529 GRQ-YFYTMTQDYGVMPNSQHYAC-MVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLG 586
Query: 648 GHGIHGYGKEAIELFEKMLAL 668
+HG + A +K+ A+
Sbjct: 587 ASRVHGNTELAETAADKIFAM 607
Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 194/413 (46%), Gaps = 67/413 (16%)
Query: 104 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVE-----LLSD 158
+++ Y+ G D+R VFD + +N WNAL+S + +N + +F L+S
Sbjct: 163 MLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSW 222
Query: 159 TELKPDNFTFPCVIKA-----CGGIAD-VSFGSGVHGMAAKMGL-----------IGDVF 201
L +++A + D VS+ + + G A + + DVF
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282
Query: 202 VSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCE 261
A+++ Y + VEE +LF+ MPERN VSWN+++ G + G E L +M C
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQ-GERMEMAKELFDVMPC- 340
Query: 262 EGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSE 321
R + N ++ YA+CG +SE
Sbjct: 341 ---------------------------------------RNVSTWNTMITGYAQCGKISE 361
Query: 322 AQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRK-MQMKEEEMKPNEVTVLNVLTS 380
A+ LFDK ++ VSW +I +S +G +F+ LR +QM+ E + N + + L++
Sbjct: 362 AKNLFDKMPKRDPVSWAAMIAGYSQSGH---SFEALRLFVQMEREGGRLNRSSFSSALST 418
Query: 381 CSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSW 440
C++ L K+LHG ++ G++ V NA ++ Y KCGS A ++F M + + SW
Sbjct: 419 CADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSW 478
Query: 441 NALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKE 493
N +I GY+++G AL +F M L+PD ++ +++ AC+H + +G++
Sbjct: 479 NTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 146/286 (51%), Gaps = 13/286 (4%)
Query: 97 DFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELL 156
D + +IT Y+ G ++R++FD +++F W A+VSG+ +N + + +F ++
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP 308
Query: 157 SDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV 216
E+ + V +A F M + +V N +I Y +C +
Sbjct: 309 ERNEVSWNAMLAGYVQGERMEMAKELFDV----MPCR-----NVSTWNTMITGYAQCGKI 359
Query: 217 EEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLP 276
E LF+ MP+R+ VSW ++I G S++G S E+ L ++M EG + ++ + L
Sbjct: 360 SEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME--REGGRLNRSSFSSALS 417
Query: 277 VCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVS 336
CA ++LG +HG VK G V NAL+ MY KCG + EA LF + K++VS
Sbjct: 418 TCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVS 477
Query: 337 WNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCS 382
WNT+I +S G G L MK E +KP++ T++ VL++CS
Sbjct: 478 WNTMIAGYSRHG--FGEVALRFFESMKREGLKPDDATMVAVLSACS 521
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 124/250 (49%), Gaps = 7/250 (2%)
Query: 104 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKP 163
+IT Y+ CG +++ +FD + R+ W A+++G++++ + L +FV++ + +
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG-RL 407
Query: 164 DNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 223
+ +F + C + + G +HG K G FV NAL+ MY KC +EE LF
Sbjct: 408 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 467
Query: 224 EVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGN 283
+ M +++VSWN++I G S +GF + M EG PD AT+V VL C+ G
Sbjct: 468 KEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMK--REGLKPDDATMVAVLSACSHTGL 525
Query: 284 VDLG-ILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNN--NKNVVSWNTI 340
VD G + + G+ +VD+ + G L +A L KN + W T+
Sbjct: 526 VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLM-KNMPFEPDAAIWGTL 584
Query: 341 IGAFSMAGDV 350
+GA + G+
Sbjct: 585 LGASRVHGNT 594
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 173/393 (44%), Gaps = 41/393 (10%)
Query: 403 DNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQ 462
D+D N + +Y + G A VF M + S+N +I GY +NG+ A F +
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 463 MTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEK 522
M E DL S +I ++L + +E+ + E D + ++LS Y
Sbjct: 121 MP----ERDLVSWNVMIKGYVRNRNLGKARELFEIMP----ERDVCSWNTMLSGYAQNGC 172
Query: 523 SSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSA 582
AR +FD M +K+ VSWN +++ Y QN EA +LF+ + + + +
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKK 232
Query: 583 CSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSW 642
+ A + ++ D +II YA+ G ++++R++FD +DV +W
Sbjct: 233 KKIVEARQF--------FDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTW 284
Query: 643 NAIIGGHGIHGYGKEAIELFEKM--------------LALGHKPDTFTFVGILMACNHAG 688
A++ G+ + +EA ELF+KM G + + + +M C +
Sbjct: 285 TAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS 344
Query: 689 LVENGLKYFSQMQKLHAVK------PKLE--HYACVVDMLGRAGKLDDAFKLIIEMPEEA 740
+ ++Q K+ K PK + +A ++ ++G +A +L ++M E
Sbjct: 345 TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG 404
Query: 741 ---DAGIWSSLLRSCRTYGALKMGEKVAKTLLE 770
+ +SS L +C AL++G+++ L++
Sbjct: 405 GRLNRSSFSSALSTCADVVALELGKQLHGRLVK 437
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 84/179 (46%), Gaps = 4/179 (2%)
Query: 69 LQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 128
L C +E+GK++H + + F+ N L+ MY CG ++ +F + ++
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNA-LLLMYCKCGSIEEANDLFKEMAGKD 474
Query: 129 LFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSG-V 187
+ WN +++G++++ + +V F E + LKPD+ T V+ AC V G
Sbjct: 475 IVSWNTMIAGYSRHG-FGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYF 533
Query: 188 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP-ERNLVSWNSIICGSSENG 245
+ M G++ + ++ + G+ +E+ L + MP E + W +++ S +G
Sbjct: 534 YTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHG 592
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/622 (37%), Positives = 359/622 (57%), Gaps = 2/622 (0%)
Query: 322 AQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSC 381
+ +LF N+ +N++I F T DL + +++ + + T VL +C
Sbjct: 64 SYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLF--LSIRKHGLYLHGFTFPLVLKAC 121
Query: 382 SEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWN 441
+ S +LH ++ GF++D + + Y+ G A +F + R+V +W
Sbjct: 122 TRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWT 181
Query: 442 ALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRN 501
AL GY +G H +A+D F +M ++PD + I ++ AC H+ L G+ I ++
Sbjct: 182 ALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEM 241
Query: 502 GLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLF 561
++ +SF +L++LY C K AR +FD M +K +V+W+TMI GY+ N P E I LF
Sbjct: 242 EMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELF 301
Query: 562 RRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKC 621
+M ++P + SIV LS+C+ L AL LG+ + + F+A ++IDMYAKC
Sbjct: 302 LQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKC 361
Query: 622 GCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGIL 681
G + + VF +K+KD+ NA I G +G+ K + +F + LG PD TF+G+L
Sbjct: 362 GAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLL 421
Query: 682 MACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEAD 741
C HAGL+++GL++F+ + ++A+K +EHY C+VD+ GRAG LDDA++LI +MP +
Sbjct: 422 CGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPN 481
Query: 742 AGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQR 801
A +W +LL CR ++ E V K L+ LEP A NYV +SNIY+ +WD+ +R
Sbjct: 482 AIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDM 541
Query: 802 MKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQISKIGYKPYTEAV 861
M ++G++K G SWIEL G +H F+ D HP ++I L ++ +G+ P TE V
Sbjct: 542 MNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFV 601
Query: 862 LHELEEEEKVNILRGHSEKLAISFGLLKTTKDLTLRVCKNLRICVDCHNAAKLISKVAER 921
++EEEEK +L HSEKLA++ GL+ T +RV KNLR+C DCH KLISK+ R
Sbjct: 602 FFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRR 661
Query: 922 EIVIRDNKRFHHFRDGVCSCGD 943
EIV+RDN RFH F +G CSC D
Sbjct: 662 EIVVRDNNRFHCFTNGSCSCND 683
Score = 179 bits (455), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 192/377 (50%), Gaps = 9/377 (2%)
Query: 117 SRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACG 176
S +F + N+F +N+L++GF N L+ + L +F+ + L FTFP V+KAC
Sbjct: 64 SYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSI-RKHGLYLHGFTFPLVLKACT 122
Query: 177 GIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNS 236
+ G +H + K G DV +L+++Y + + KLF+ +P+R++V+W +
Sbjct: 123 RASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTA 182
Query: 237 IICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVK 296
+ G + +G E+ DL KM+ E G PD +V VL C G++D G + +
Sbjct: 183 LFSGYTTSGRHREAIDLFKKMV--EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEE 240
Query: 297 LGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDL 356
+ + + V LV++YAKCG + +A+ +FD K++V+W+T+I ++ +L
Sbjct: 241 MEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIEL 300
Query: 357 LRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSL--RHGFDNDELVANAFVV 414
+QM +E +KP++ +++ L+SC+ L L E G SL RH F + +ANA +
Sbjct: 301 F--LQMLQENLKPDQFSIVGFLSSCASLGA-LDLGEW-GISLIDRHEFLTNLFMANALID 356
Query: 415 AYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFS 474
YAKCG+ VF M + + NA I G A+NG + F Q + PD +
Sbjct: 357 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGST 416
Query: 475 IGSLILACTHLKSLHRG 491
L+ C H + G
Sbjct: 417 FLGLLCGCVHAGLIQDG 433
Score = 147 bits (370), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 166/315 (52%), Gaps = 6/315 (1%)
Query: 67 VLLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 126
++L+AC ++G +H L+ F++D T L+++YS G D+ ++FD +
Sbjct: 116 LVLKACTRASSRKLGIDLHSLV-VKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPD 174
Query: 127 RNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSG 186
R++ W AL SG+T + + + + +F +++ + +KPD++ V+ AC + D+ G
Sbjct: 175 RSVVTWTALFSGYTTSGRHREAIDLFKKMV-EMGVKPDSYFIVQVLSACVHVGDLDSGEW 233
Query: 187 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGF 246
+ +M + + FV L+ +Y KC +E+ +F+ M E+++V+W+++I G + N F
Sbjct: 234 IVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSF 293
Query: 247 SCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVN 306
E +L ++M+ +E PD ++V L CA G +DLG L + L +
Sbjct: 294 PKEGIELFLQML--QENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMA 351
Query: 307 NALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEE 366
NAL+DMYAKCG ++ +F + K++V N I + G V +F + Q ++
Sbjct: 352 NALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFG--QTEKLG 409
Query: 367 MKPNEVTVLNVLTSC 381
+ P+ T L +L C
Sbjct: 410 ISPDGSTFLGLLCGC 424
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 163/309 (52%), Gaps = 19/309 (6%)
Query: 475 IGSLI-LACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEM 533
I +LI +ACT ++ K+IH +I + L D+F LL + ++ + +LF
Sbjct: 16 IKTLISVACT----VNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHT 71
Query: 534 EDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGK 593
+ ++ +N++I G+ N L E + LF + G+ + +L AC++ S+ +LG
Sbjct: 72 QFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGI 131
Query: 594 ETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHG 653
+ H +K +D S++ +Y+ G L + ++FD + D+ V +W A+ G+ G
Sbjct: 132 DLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSG 191
Query: 654 YGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENG---LKYFS--QMQKLHAVKP 708
+EAI+LF+KM+ +G KPD++ V +L AC H G +++G +KY +MQK V+
Sbjct: 192 RHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRT 251
Query: 709 KLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYGALKMGEKVAKTL 768
L V++ + GK++ A + M E+ D WS++++ + K G ++ +
Sbjct: 252 TL------VNLYAKCGKMEKARSVFDSMVEK-DIVTWSTMIQGYASNSFPKEGIELFLQM 304
Query: 769 LE--LEPDK 775
L+ L+PD+
Sbjct: 305 LQENLKPDQ 313
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 167/343 (48%), Gaps = 19/343 (5%)
Query: 68 LLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 127
+L AC H D++ G+ + + + N F+ T L+ +Y+ CG +R VFDS+ +
Sbjct: 218 VLSACVHVGDLDSGEWIVKYMEEMEMQKNSFV-RTTLVNLYAKCGKMEKARSVFDSMVEK 276
Query: 128 NLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGV 187
++ W+ ++ G+ N + + +F+++L + LKPD F+ + +C + + G
Sbjct: 277 DIVTWSTMIQGYASNSFPKEGIELFLQMLQEN-LKPDQFSIVGFLSSCASLGALDLGEWG 335
Query: 188 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFS 247
+ + + ++F++NALI MY KC + ++F+ M E+++V N+ I G ++NG
Sbjct: 336 ISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHV 395
Query: 248 CESFDLLIKMMGCEE--GFIPDVATVVTVLPVCAGEGNVDLGI-LVHGLAVKLGLTRELM 304
SF + G E G PD +T + +L C G + G+ + ++ L R +
Sbjct: 396 KLSF----AVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVE 451
Query: 305 VNNALVDMYAKCGFLSEA-QILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMK 363
+VD++ + G L +A +++ D N + W ++ + D +L+++
Sbjct: 452 HYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIAL 511
Query: 364 EEEMKPNEVTVLNVLT------SCSEKSELLS---LKELHGYS 397
E N V + N+ + +E ++++ +K++ GYS
Sbjct: 512 EPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYS 554
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/567 (39%), Positives = 344/567 (60%), Gaps = 48/567 (8%)
Query: 425 AENVFHGMDSRTVSSWNALICGYAQNGDH--LKALDYFLQMTHSD-LEPDLFSIGSLILA 481
A +F+ M R SWN +I G++++ + L A+ F +M + +EP+ F+ S++ A
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 482 CTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHC---------------EKS--- 523
C + GK+IHG ++ G GD F +L+ +Y+ C EK
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
Query: 524 ---------------------------SSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVE 556
+AR+LFD+M +S+VSWNTMI+GYS N +
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 557 AIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIID 616
A+ +FR M ++P +++VS+L A S+L +L LG+ H YA + + D + ++ID
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 317
Query: 617 MYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFT 676
MY+KCG +E++ VF+RL ++V +W+A+I G IHG +AI+ F KM G +P
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 677 FVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEM 736
++ +L AC+H GLVE G +YFSQM + ++P++EHY C+VD+LGR+G LD+A + I+ M
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 737 PEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDVR 796
P + D IW +LL +CR G ++MG++VA L+++ P + YV +SN+YA W +V
Sbjct: 438 PIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVS 497
Query: 797 MMRQRMKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQISKIGYKP 856
MR RMKE+ ++K+ GCS I++ G +H FVV D+ HP+ +EI M + +++ GY+P
Sbjct: 498 EMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRP 557
Query: 857 YTEAVLHELEEEEKVNILRGHSEKLAISFGLLKTTKDLTLRVCKNLRICVDCHNAAKLIS 916
T VL LEEE+K N+L HSEK+A +FGL+ T+ +R+ KNLRIC DCH++ KLIS
Sbjct: 558 ITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLIS 617
Query: 917 KVAEREIVIRDNKRFHHFRDGVCSCGD 943
KV +R+I +RD KRFHHF+DG CSC D
Sbjct: 618 KVYKRKITVRDRKRFHHFQDGSCSCMD 644
Score = 164 bits (414), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 171/314 (54%), Gaps = 53/314 (16%)
Query: 117 SRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSI--FVELLSDTELKPDNFTFPCVIKA 174
+ ++F+ + RN F WN ++ GF++++ +++I F E++SD ++P+ FTFP V+KA
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 175 CGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFV-------------EEMV- 220
C + G +HG+A K G GD FV + L+ MY C F+ ++MV
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
Query: 221 -------------------------------KLFEVMPERNLVSWNSIICGSSENGFSCE 249
LF+ M +R++VSWN++I G S NGF +
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 250 SFDLLIKMMGCEEGFI-PDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNA 308
+ ++ +M ++G I P+ T+V+VLP + G+++LG +H A G+ + ++ +A
Sbjct: 258 AVEVFREM---KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 314
Query: 309 LVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMK 368
L+DMY+KCG + +A +F++ +NV++W+ +I F++ G D K M++ ++
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCK--MRQAGVR 372
Query: 369 PNEVTVLNVLTSCS 382
P++V +N+LT+CS
Sbjct: 373 PSDVAYINLLTACS 386
Score = 146 bits (369), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 131/523 (25%), Positives = 231/523 (44%), Gaps = 92/523 (17%)
Query: 168 FPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF----VEEMVKLF 223
FP I C I D+S +H + K G + D + ++ ++ K+F
Sbjct: 27 FP-QINNCRTIRDLS---QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIF 82
Query: 224 EVMPERNLVSWNSIICGSSENG--FSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGE 281
MP+RN SWN+II G SE+ + + L +MM +E P+ T +VL CA
Sbjct: 83 NQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMS-DEFVEPNRFTFPSVLKACAKT 141
Query: 282 GNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILF--------------- 326
G + G +HGLA+K G + V + LV MY CGF+ +A++LF
Sbjct: 142 GKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDR 201
Query: 327 ------------------------------DKNNNKNVVSWNTIIGAFSMAGDVCGTFDL 356
DK ++VVSWNT+I +S+ G ++
Sbjct: 202 RKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEV 261
Query: 357 LRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAY 416
R +MK+ +++PN VT+++VL + S L + LH Y+ G D+++ +A + Y
Sbjct: 262 FR--EMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMY 319
Query: 417 AKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIG 476
+KCG A +VF + V +W+A+I G+A +G A+D F +M + + P +
Sbjct: 320 SKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYI 379
Query: 477 SLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDK 536
+L+ AC+ HG ++ G + S V D +E +
Sbjct: 380 NLLTACS-----------HGGLVEEG------------------RRYFSQMVSVDGLEPR 410
Query: 537 SLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETH 596
+ + M+ ++ L EA + ++ ++P ++ ++L AC + +GK
Sbjct: 411 -IEHYGCMVDLLGRSGLLDEAEEF---ILNMPIKPDDVIWKALLGACRMQGNVEMGKRV- 465
Query: 597 CYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDV 639
L ++ +D+ ++ +MYA G + + R+K+KD+
Sbjct: 466 ANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDI 508
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 192/418 (45%), Gaps = 56/418 (13%)
Query: 290 VHGLAVKLGLTRELMVNNALVDMYAKCGF----LSEAQILFDKNNNKNVVSWNTIIGAFS 345
+H + +K G R+ + ++ A L A +F++ +N SWNTII FS
Sbjct: 42 IHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFS 101
Query: 346 MAGD--VCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFD 403
+ + L +M M +E ++PN T +VL +C++ ++ K++HG +L++GF
Sbjct: 102 ESDEDKALIAITLFYEM-MSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFG 160
Query: 404 NDELVANAFVVAYAKCG----------------------------SEI------------ 423
DE V + V Y CG EI
Sbjct: 161 GDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMR 220
Query: 424 -----SAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSL 478
+A +F M R+V SWN +I GY+ NG A++ F +M D+ P+ ++ S+
Sbjct: 221 LGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSV 280
Query: 479 ILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSL 538
+ A + L SL G+ +H + +G+ D G +L+ +Y C A +F+ + +++
Sbjct: 281 LPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENV 340
Query: 539 VSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKE--TH 596
++W+ MI G++ + +AI F +M GV+P +++ +++L+ACS + G+ +
Sbjct: 341 ITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQ 400
Query: 597 CYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDK-DVTSWNAIIGGHGIHG 653
++ + C ++D+ + G L+++ + K D W A++G + G
Sbjct: 401 MVSVDGLEPRIEHYGC-MVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457
Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 148/330 (44%), Gaps = 51/330 (15%)
Query: 68 LLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSR--------- 118
+L+AC I+ GK++H L + F D + + L+ MY +CGF D+R
Sbjct: 134 VLKACAKTGKIQEGKQIHGL-ALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIE 192
Query: 119 ------------------------------------RVFDSLKTRNLFQWNALVSGFTKN 142
+FD ++ R++ WN ++SG++ N
Sbjct: 193 KDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLN 252
Query: 143 ELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFV 202
+ D + +F E + +++P+ T V+ A + + G +H A G+ D +
Sbjct: 253 GFFKDAVEVFRE-MKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVL 311
Query: 203 SNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEE 262
+ALI MY KC +E+ + +FE +P N+++W+++I G + +G + ++ D KM +
Sbjct: 312 GSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMR--QA 369
Query: 263 GFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKL-GLTRELMVNNALVDMYAKCGFLSE 321
G P + +L C+ G V+ G V + GL + +VD+ + G L E
Sbjct: 370 GVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDE 429
Query: 322 A-QILFDKNNNKNVVSWNTIIGAFSMAGDV 350
A + + + + V W ++GA M G+V
Sbjct: 430 AEEFILNMPIKPDDVIWKALLGACRMQGNV 459
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 145/327 (44%), Gaps = 57/327 (17%)
Query: 482 CTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSL----YMHCEKSSSARVLFDEMEDKS 537
C ++ L +IH I++G D+ +L +H A +F++M ++
Sbjct: 33 CRTIRDL---SQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89
Query: 538 LVSWNTMIAGYSQN--KLPVEAIVLFRRMFSIG-VQPCEISIVSILSACSQLSALRLGKE 594
SWNT+I G+S++ + AI LF M S V+P + S+L AC++ ++ GK+
Sbjct: 90 CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 595 THCYALKAILTNDAFVACSIIDMYAKCGCLEQ---------------------------- 626
H ALK D FV +++ MY CG ++
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209
Query: 627 -----------------SRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALG 669
+R +FD+++ + V SWN +I G+ ++G+ K+A+E+F +M
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 670 HKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDA 729
+P+ T V +L A + G +E G ++ + ++ + ++DM + G ++ A
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKA 328
Query: 730 FKLIIEMPEEADAGIWSSLLRSCRTYG 756
+ +P E + WS+++ +G
Sbjct: 329 IHVFERLPRE-NVITWSAMINGFAIHG 354
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 447 bits (1150), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/568 (38%), Positives = 338/568 (59%), Gaps = 1/568 (0%)
Query: 376 NVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSR 435
+L C+ L+ + +H + L+ F +D ++ N + YAKCGS A VF M R
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 436 TVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIH 495
+W LI GY+Q+ AL +F QM P+ F++ S+I A + G ++H
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 496 GFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPV 555
GF ++ G + + G +LL LY A+++FD +E ++ VSWN +IAG+++
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 556 EAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSII 615
+A+ LF+ M G +P S S+ ACS L GK H Y +K+ AF +++
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLL 304
Query: 616 DMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTF 675
DMYAK G + +R++FDRL +DV SWN+++ + HG+GKEA+ FE+M +G +P+
Sbjct: 305 DMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEI 364
Query: 676 TFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIE 735
+F+ +L AC+H+GL++ G Y+ M+K + P+ HY VVD+LGRAG L+ A + I E
Sbjct: 365 SFLSVLTACSHSGLLDEGWHYYELMKK-DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEE 423
Query: 736 MPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDV 795
MP E A IW +LL +CR + ++G A+ + EL+PD +V++ NIYA +W+D
Sbjct: 424 MPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDA 483
Query: 796 RMMRQRMKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQISKIGYK 855
+R++MKE G++KE CSW+E+ IH FV D HP+ EEI W + +I ++GY
Sbjct: 484 ARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYV 543
Query: 856 PYTEAVLHELEEEEKVNILRGHSEKLAISFGLLKTTKDLTLRVCKNLRICVDCHNAAKLI 915
P T V+ ++++E+ L+ HSEK+A++F LL T T+ + KN+R+C DCH A KL
Sbjct: 544 PDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLA 603
Query: 916 SKVAEREIVIRDNKRFHHFRDGVCSCGD 943
SKV REI++RD RFHHF+DG CSC D
Sbjct: 604 SKVVGREIIVRDTNRFHHFKDGNCSCKD 631
Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/416 (29%), Positives = 213/416 (51%), Gaps = 6/416 (1%)
Query: 241 SSENGFSCESFDLLIKMMG--CEEGFIP-DVATVVTVLPVCAGEGNVDLGILVHGLAVKL 297
S + S DLL++ E +IP D T+L C + G +VH ++
Sbjct: 30 SEDESLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQS 89
Query: 298 GLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLL 357
++++ N L++MYAKCG L EA+ +F+K ++ V+W T+I +S C LL
Sbjct: 90 IFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDA--LL 147
Query: 358 RKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYA 417
QM PNE T+ +V+ + + + +LHG+ ++ GFD++ V +A + Y
Sbjct: 148 FFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYT 207
Query: 418 KCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGS 477
+ G A+ VF ++SR SWNALI G+A+ KAL+ F M P FS S
Sbjct: 208 RYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYAS 267
Query: 478 LILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKS 537
L AC+ L +GK +H ++I++G + +F G +LL +Y AR +FD + +
Sbjct: 268 LFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRD 327
Query: 538 LVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHC 597
+VSWN+++ Y+Q+ EA+ F M +G++P EIS +S+L+ACS L G +
Sbjct: 328 VVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYE 387
Query: 598 YALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTS-WNAIIGGHGIH 652
K + +A+ +++D+ + G L ++ R + + + + W A++ +H
Sbjct: 388 LMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
Score = 173 bits (439), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 134/538 (24%), Positives = 237/538 (44%), Gaps = 61/538 (11%)
Query: 156 LSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 215
L + + D + ++K C + G VH + D+ + N L+ MY KC
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 216 VEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVL 275
+EE K+FE MP+R+ V+W ++I G S++ C++ +M+ G+ P+ T+ +V+
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML--RFGYSPNEFTLSSVI 168
Query: 276 PVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVV 335
A E G +HG VK G + V +AL+D+Y + G + +AQ++FD ++N V
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228
Query: 336 SWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHG 395
SWN +I + +L + M + +P+ + ++ +CS L K +H
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGML--RDGFRPSHFSYASLFGACSSTGFLEQGKWVHA 286
Query: 396 YSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLK 455
Y ++ G N + YAK GS A +F + R V SWN+L+ YAQ+G +
Sbjct: 287 YMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKE 346
Query: 456 ALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLS 515
A+ +F +M + P+ S S++ AC+H L G + + ++G+ +++ ++++
Sbjct: 347 AVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVD 406
Query: 516 LYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEIS 575
L + A +EM P+E P
Sbjct: 407 LLGRAGDLNRALRFIEEM--------------------PIE--------------PTAAI 432
Query: 576 IVSILSACSQLSALRLGKETHCYALKAIL---TNDAFVACSIIDMYAKCGCLEQSRRVFD 632
++L+AC LG YA + + +D + ++YA G + RV
Sbjct: 433 WKALLNACRMHKNTELG----AYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRK 488
Query: 633 RLKDKDVT-----SW----NAI---IGGHGIHGYGKEAIELFEKMLA----LGHKPDT 674
++K+ V SW NAI + H +E +E++LA LG+ PDT
Sbjct: 489 KMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDT 546
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 168/316 (53%), Gaps = 6/316 (1%)
Query: 67 VLLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKT 126
LL+ C K + G+ VH I S F +D ++ L+ MY+ CG ++R+VF+ +
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSI-FRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 127 RNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSG 186
R+ W L+SG+++++ D L F ++L P+ FT VIKA G
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLR-FGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 187 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGF 246
+HG K G +V V +AL+ +Y + +++ +F+ + RN VSWN++I G +
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 247 SCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVN 306
+ ++ +L M+ +GF P + ++ C+ G ++ G VH +K G
Sbjct: 243 TEKALELFQGML--RDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG 300
Query: 307 NALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEE 366
N L+DMYAK G + +A+ +FD+ ++VVSWN+++ A++ G G + +M+
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHG--FGKEAVWWFEEMRRVG 358
Query: 367 MKPNEVTVLNVLTSCS 382
++PNE++ L+VLT+CS
Sbjct: 359 IRPNEISFLSVLTACS 374
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 162/306 (52%), Gaps = 11/306 (3%)
Query: 458 DYFLQMTHSDLE-----PDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGIS 512
D L+ + +DLE D +L+ CT K L +G+ +H ++++ D G +
Sbjct: 41 DLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNT 100
Query: 513 LLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPC 572
LL++Y C AR +F++M + V+W T+I+GYSQ+ P +A++ F +M G P
Sbjct: 101 LLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPN 160
Query: 573 EISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFD 632
E ++ S++ A + G + H + +K ++ V +++D+Y + G ++ ++ VFD
Sbjct: 161 EFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFD 220
Query: 633 RLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVEN 692
L+ ++ SWNA+I GH ++A+ELF+ ML G +P F++ + AC+ G +E
Sbjct: 221 ALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQ 280
Query: 693 GLKYFSQMQKLHAVKPKLEHYA--CVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLR 750
G + M K KL +A ++DM ++G + DA K+ + + D W+SLL
Sbjct: 281 GKWVHAYMIK---SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR-DVVSWNSLLT 336
Query: 751 SCRTYG 756
+ +G
Sbjct: 337 AYAQHG 342
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 137/289 (47%), Gaps = 6/289 (2%)
Query: 94 FSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFV 153
F ++ + + L+ +Y+ G D++ VFD+L++RN WNAL++G + L +F
Sbjct: 192 FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQ 251
Query: 154 ELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKC 213
+L D +P +F++ + AC + G VH K G F N L+ MY K
Sbjct: 252 GMLRDG-FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKS 310
Query: 214 AFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVT 273
+ + K+F+ + +R++VSWNS++ +++GF E+ +M G P+ + ++
Sbjct: 311 GSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV--GIRPNEISFLS 368
Query: 274 VLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEA-QILFDKNNNK 332
VL C+ G +D G + L K G+ E +VD+ + G L+ A + + +
Sbjct: 369 VLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEP 428
Query: 333 NVVSWNTIIGAFSMAGDV-CGTFDLLRKMQMKEEEMKPNEVTVLNVLTS 380
W ++ A M + G + ++ ++ P+ V + N+ S
Sbjct: 429 TAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPH-VILYNIYAS 476
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/650 (37%), Positives = 364/650 (56%), Gaps = 60/650 (9%)
Query: 309 LVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAF----------SMAGDVCGTFDLLR 358
L+ YA ++ A+ +FD+ +NV+ N +I ++ + G +CG
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGC----- 134
Query: 359 KMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAK 418
++P+ T VL +CS ++ +++HG + + G + V N V Y K
Sbjct: 135 -------NVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGK 187
Query: 419 CGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSL 478
CG A V M R V SWN+L+ GYAQN AL+ +M + D ++ SL
Sbjct: 188 CGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASL 247
Query: 479 ILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSL 538
+ A ++ + E + +F +M KSL
Sbjct: 248 LPAVSNTTT---------------------------------ENVMYVKDMFFKMGKKSL 274
Query: 539 VSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCY 598
VSWN MI Y +N +PVEA+ L+ RM + G +P +SI S+L AC SAL LGK+ H Y
Sbjct: 275 VSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY 334
Query: 599 ALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEA 658
+ L + + ++IDMYAKCGCLE++R VF+ +K +DV SW A+I +G G G +A
Sbjct: 335 IERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDA 394
Query: 659 IELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVD 718
+ LF K+ G PD+ FV L AC+HAGL+E G F M + + P+LEH AC+VD
Sbjct: 395 VALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVD 454
Query: 719 MLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAEN 778
+LGRAGK+ +A++ I +M E + +W +LL +CR + +G A L +L P+++
Sbjct: 455 LLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGY 514
Query: 779 YVLVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEI 838
YVL+SNIYA + +W++V +R MK +GL+K G S +E+ IH+F+VGD HP+ +EI
Sbjct: 515 YVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEI 574
Query: 839 RGMWGRLEEQISKIGYKPYTEAVLHELEEEEKVNILRGHSEKLAISFGLLKTTKDL---- 894
L +++ ++GY P +E+ LH++EEE+K L HSEKLAI F L+ T ++
Sbjct: 575 YRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSN 634
Query: 895 -TLRVCKNLRICVDCHNAAKLISKVAEREIVIRDNKRFHHFRDGVCSCGD 943
T+R+ KNLRIC DCH AAKLIS++ REI+IRD RFH FR GVCSCGD
Sbjct: 635 NTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGD 684
Score = 190 bits (483), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 219/468 (46%), Gaps = 49/468 (10%)
Query: 29 LHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELI 88
LH L +S+ ++ +L L+ L +E +L Q DI + VH I
Sbjct: 8 LHLLHFPKFRKFQSRKVSSSLPKLE--LDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRI 65
Query: 89 SASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDV 148
N + +L+ Y+ +R+VFD + RN+ N ++ + N Y +
Sbjct: 66 ILEDLRCNSSL-GVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEG 124
Query: 149 LSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIA 208
+ +F + ++PD++TFPCV+KAC + G +HG A K+GL +FV N L++
Sbjct: 125 VKVF-GTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVS 183
Query: 209 MYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEE----GF 264
MYGKC F+ E + + M R++VSWNS++ G ++N + FD +++ C E
Sbjct: 184 MYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQN----QRFDDALEV--CREMESVKI 237
Query: 265 IPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQI 324
D T+ ++LP AV T +M + DM+ K G
Sbjct: 238 SHDAGTMASLLP-----------------AVSNTTTENVMY---VKDMFFKMG------- 270
Query: 325 LFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEK 384
K++VSWN +IG + +L +M+ + +P+ V++ +VL +C +
Sbjct: 271 ------KKSLVSWNVMIGVYMKNAMPVEAVELYSRME--ADGFEPDAVSITSVLPACGDT 322
Query: 385 SELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALI 444
S L K++HGY R + L+ NA + YAKCG A +VF M SR V SW A+I
Sbjct: 323 SALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMI 382
Query: 445 CGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGK 492
Y +G A+ F ++ S L PD + + + AC+H L G+
Sbjct: 383 SAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGR 430
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 216/452 (47%), Gaps = 45/452 (9%)
Query: 206 LIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFI 265
L+ Y V K+F+ +PERN++ N +I NGF E + M GC
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGC--NVR 137
Query: 266 PDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQIL 325
PD T VL C+ G + +G +HG A K+GL+ L V N LV MY KCGFLSEA+++
Sbjct: 138 PDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLV 197
Query: 326 FDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKS 385
D+ + ++VVSWN+++ ++ ++ R+M+
Sbjct: 198 LDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME------------------------ 233
Query: 386 ELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALIC 445
S++ D + + V+ + + +++F M +++ SWN +I
Sbjct: 234 -----------SVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIG 282
Query: 446 GYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEG 505
Y +N ++A++ + +M EPD SI S++ AC +L GK+IHG++ R L
Sbjct: 283 VYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP 342
Query: 506 DSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMF 565
+ +L+ +Y C AR +F+ M+ + +VSW MI+ Y + +A+ LF ++
Sbjct: 343 NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ 402
Query: 566 SIGVQPCEISIVSILSACSQLSALRLGKETHCYALKA----ILTNDAFVACSIIDMYAKC 621
G+ P I+ V+ L+ACS L G+ C+ L I +AC ++D+ +
Sbjct: 403 DSGLVPDSIAFVTTLAACSHAGLLEEGRS--CFKLMTDHYKITPRLEHLAC-MVDLLGRA 459
Query: 622 GCLEQSRR-VFDRLKDKDVTSWNAIIGGHGIH 652
G ++++ R + D + + W A++G +H
Sbjct: 460 GKVKEAYRFIQDMSMEPNERVWGALLGACRVH 491
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 149/307 (48%), Gaps = 9/307 (2%)
Query: 461 LQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHC 520
L++ + +F +G ++ +++L + +H +I L +S G+ L+ Y
Sbjct: 31 LELDQKSPQETVFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASL 87
Query: 521 EKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSIL 580
+ +SAR +FDE+ +++++ N MI Y N E + +F M V+P + +L
Sbjct: 88 KDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVL 147
Query: 581 SACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVT 640
ACS + +G++ H A K L++ FV ++ MY KCG L ++R V D + +DV
Sbjct: 148 KACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVV 207
Query: 641 SWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQM 700
SWN+++ G+ + +A+E+ +M ++ D T +L A ++ EN +
Sbjct: 208 SWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT-TTENVMYVKDMF 266
Query: 701 QKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPE---EADAGIWSSLLRSCRTYGA 757
K+ K L + ++ + + +A +L M E DA +S+L +C A
Sbjct: 267 FKMG--KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 758 LKMGEKV 764
L +G+K+
Sbjct: 325 LSLGKKI 331
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 445 bits (1145), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/570 (40%), Positives = 357/570 (62%), Gaps = 15/570 (2%)
Query: 385 SELLSLKELHGYSLRHG--FDNDELVANA--FVVAYAKCGSEISAENVFHGMDSR-TVSS 439
S + L+++H +S+RHG + EL + ++V+ A VF ++ V
Sbjct: 28 SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87
Query: 440 WNALICGYAQNGDHLKALDYFLQMTHSDL-EPDLFSIGSLILACTHLKSLHRGKEIHGFV 498
WN LI GYA+ G+ + A + +M S L EPD + LI A T + + G+ IH V
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 499 IRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAI 558
IR+G + SLL LY +C +SA +FD+M +K LV+WN++I G+++N P EA+
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 559 VLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMY 618
L+ M S G++P +IVS+LSAC+++ AL LGK H Y +K LT + + ++D+Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 619 AKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLAL-GHKPDTFTF 677
A+CG +E+++ +FD + DK+ SW ++I G ++G+GKEAIELF+ M + G P TF
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327
Query: 678 VGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMP 737
VGIL AC+H G+V+ G +YF +M++ + ++P++EH+ C+VD+L RAG++ A++ I MP
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387
Query: 738 EEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDVRM 797
+ + IW +LL +C +G + E +L+LEP+ + +YVL+SN+YA ++W DV+
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447
Query: 798 MRQRMKERGLQKEAGCSWIELGGNIHSFVVGDNMHPE----WEEIRGMWGRLEEQISKIG 853
+R++M G++K G S +E+G +H F++GD HP+ + +++ M GRL + G
Sbjct: 448 IRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSE----G 503
Query: 854 YKPYTEAVLHELEEEEKVNILRGHSEKLAISFGLLKTTKDLTLRVCKNLRICVDCHNAAK 913
Y P V ++EEEEK N + HSEK+AI+F L+ T + + V KNLR+C DCH A K
Sbjct: 504 YVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIK 563
Query: 914 LISKVAEREIVIRDNKRFHHFRDGVCSCGD 943
L+SKV REIV+RD RFHHF++G CSC D
Sbjct: 564 LVSKVYNREIVVRDRSRFHHFKNGSCSCQD 593
Score = 176 bits (447), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 154/267 (57%), Gaps = 4/267 (1%)
Query: 117 SRRVFDSL-KTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKAC 175
+ +VF + K N+F WN L+ G+ + S++ E+ ++PD T+P +IKA
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 176 GGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWN 235
+ADV G +H + + G ++V N+L+ +Y C V K+F+ MPE++LV+WN
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 236 SIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAV 295
S+I G +ENG E+ L +M +G PD T+V++L CA G + LG VH +
Sbjct: 192 SVINGFAENGKPEEALALYTEMNS--KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 249
Query: 296 KLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFD 355
K+GLTR L +N L+D+YA+CG + EA+ LFD+ +KN VSW ++I ++ G +
Sbjct: 250 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 309
Query: 356 LLRKMQMKEEEMKPNEVTVLNVLTSCS 382
L + M+ E + P E+T + +L +CS
Sbjct: 310 LFKYME-STEGLLPCEITFVGILYACS 335
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 183/346 (52%), Gaps = 19/346 (5%)
Query: 319 LSEAQILFDKNNNK-NVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNV 377
+S A +F K NV WNT+I ++ G+ F L R+M++ ++P+ T +
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRV-SGLVEPDTHTYPFL 127
Query: 378 LTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTV 437
+ + + +++ + +H +R GF + V N+ + YA CG SA VF M + +
Sbjct: 128 IKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDL 187
Query: 438 SSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGF 497
+WN++I G+A+NG +AL + +M ++PD F+I SL+ AC + +L GK +H +
Sbjct: 188 VAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVY 247
Query: 498 VIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEA 557
+I+ GL + + LL LY C + A+ LFDEM DK+ VSW ++I G + N EA
Sbjct: 248 MIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEA 307
Query: 558 IVLFRRMFSI-GVQPCEISIVSILSACSQLSALRLGKE-----THCYALKAILTNDAFVA 611
I LF+ M S G+ PCEI+ V IL ACS ++ G E Y ++ + +
Sbjct: 308 IELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEH---FG 364
Query: 612 CSIIDMYAKCGCLEQSRRVFDRLK----DKDVTSWNAIIGGHGIHG 653
C ++D+ A+ G Q ++ ++ +K +V W ++G +HG
Sbjct: 365 C-MVDLLARAG---QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 160/305 (52%), Gaps = 9/305 (2%)
Query: 68 LLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 127
L++A D+ +G+ +H ++ S F + + L+ +Y+ CG + +VFD + +
Sbjct: 127 LIKAVTTMADVRLGETIHSVVIRSG-FGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK 185
Query: 128 NLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGV 187
+L WN++++GF +N + L+++ E+ S +KPD FT ++ AC I ++ G V
Sbjct: 186 DLVAWNSVINGFAENGKPEEALALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLGKRV 244
Query: 188 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFS 247
H K+GL ++ SN L+ +Y +C VEE LF+ M ++N VSW S+I G + NGF
Sbjct: 245 HVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFG 304
Query: 248 CESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGI-LVHGLAVKLGLTRELMVN 306
E+ +L K M EG +P T V +L C+ G V G + + + +
Sbjct: 305 KEAIELF-KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF 363
Query: 307 NALVDMYAKCGFLSEA-QILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEE 365
+VD+ A+ G + +A + + NVV W T++GA ++ GD DL +++
Sbjct: 364 GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDS----DLAEFARIQIL 419
Query: 366 EMKPN 370
+++PN
Sbjct: 420 QLEPN 424
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 252/787 (32%), Positives = 417/787 (52%), Gaps = 84/787 (10%)
Query: 81 GKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNA------ 134
GK +H I S+ ++ N RL+ +Y CG +R+VFD + R+++ WNA
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCN-RLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 135 -------------------------LVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFP 169
++S + L ++ ++ D L P FT
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFL-PSRFTLA 142
Query: 170 CVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM-VKLFEVMPE 228
V+ AC + D FG HG+A K GL ++FV NAL++MY KC F+ + V++FE + +
Sbjct: 143 SVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ 202
Query: 229 RNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVD--- 285
N VS+ ++I G + E+ + M CE+G D + +L + A D
Sbjct: 203 PNEVSYTAVIGGLARENKVLEAVQMFRLM--CEKGVQVDSVCLSNILSISAPREGCDSLS 260
Query: 286 ------LGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNT 339
LG +H LA++LG +L +NN+L+++YAK ++ A+++F + NVVSWN
Sbjct: 261 EIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNI 320
Query: 340 IIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLR 399
+I F + + L +M ++ +PNEVT ++VL +C
Sbjct: 321 MIVGFGQEYRSDKSVEFLTRM--RDSGFQPNEVTCISVLGAC------------------ 360
Query: 400 HGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDY 459
+ G + +F + +VS+WNA++ GY+ + +A+
Sbjct: 361 -----------------FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISN 403
Query: 460 FLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMH 519
F QM +L+PD ++ ++ +C L+ L GK+IHG VIR + +S L+++Y
Sbjct: 404 FRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSE 463
Query: 520 CEKSSSARVLFDE-MEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQ-PCEISIV 577
CEK + +FD+ + + + WN+MI+G+ N L +A++LFRRM V P E S
Sbjct: 464 CEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFA 523
Query: 578 SILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDK 637
++LS+CS+L +L G++ H +K+ +D+FV ++ DMY KCG ++ +R+ FD + K
Sbjct: 524 TVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRK 583
Query: 638 DVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYF 697
+ WN +I G+G +G G EA+ L+ KM++ G KPD TFV +L AC+H+GLVE GL+
Sbjct: 584 NTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEIL 643
Query: 698 SQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYGA 757
S MQ++H ++P+L+HY C+VD LGRAG+L+DA KL P ++ + +W LL SCR +G
Sbjct: 644 SSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGD 703
Query: 758 LKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGCSWIE 817
+ + +VA+ L+ L+P + YVL+SN Y+ +WDD ++ M + + K G SW
Sbjct: 704 VSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTT 763
Query: 818 LGGNIHS 824
G ++ S
Sbjct: 764 YGNDLDS 770
Score = 216 bits (551), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 159/616 (25%), Positives = 287/616 (46%), Gaps = 57/616 (9%)
Query: 68 LLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLD-SRRVFDSLKT 126
+L AC D G R H ++ T + + L++MY+ CGF +D RVF+SL
Sbjct: 144 VLSACSKVLDGVFGMRCHG-VAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ 202
Query: 127 RNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVI------KACGGIAD 180
N + A++ G + + + +F L+ + ++ D+ ++ + C +++
Sbjct: 203 PNEVSYTAVIGGLARENKVLEAVQMF-RLMCEKGVQVDSVCLSNILSISAPREGCDSLSE 261
Query: 181 V---SFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSI 237
+ G +H +A ++G GD+ ++N+L+ +Y K + +F MPE N+VSWN +
Sbjct: 262 IYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIM 321
Query: 238 ICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKL 297
I G + S +S + L +M + GF P+ T ++VL C G+V+ G
Sbjct: 322 IVGFGQEYRSDKSVEFLTRMR--DSGFQPNEVTCISVLGACFRSGDVETG---------- 369
Query: 298 GLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLL 357
+ +F +V +WN ++ +S
Sbjct: 370 -------------------------RRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNF 404
Query: 358 RKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYA 417
R+MQ + +KP++ T+ +L+SC+ L K++HG +R + + + + Y+
Sbjct: 405 RQMQF--QNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYS 462
Query: 418 KCGSEISAENVFHG-MDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSD-LEPDLFSI 475
+C +E +F ++ ++ WN++I G+ N KAL F +M + L P+ S
Sbjct: 463 ECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSF 522
Query: 476 GSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMED 535
+++ +C+ L SL G++ HG V+++G DSF +L +Y C + SAR FD +
Sbjct: 523 ATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLR 582
Query: 536 KSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKE- 594
K+ V WN MI GY N EA+ L+R+M S G +P I+ VS+L+ACS + G E
Sbjct: 583 KNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEI 642
Query: 595 -THCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTS-WNAIIGGHGIH 652
+ + I C I+D + G LE + ++ + K + W ++ +H
Sbjct: 643 LSSMQRIHGIEPELDHYIC-IVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVH 701
Query: 653 GYGKEAIELFEKMLAL 668
G A + EK++ L
Sbjct: 702 GDVSLARRVAEKLMRL 717
Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 193/437 (44%), Gaps = 49/437 (11%)
Query: 388 LSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGY 447
LS K +HG+ +R G +D + N + Y +CG A VF M R V SWNA +
Sbjct: 23 LSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFR 82
Query: 448 AQNGDHLKALDYFLQMTHSDLE-------------------------------PDLFSIG 476
+ GD +A + F M D+ P F++
Sbjct: 83 CKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLA 142
Query: 477 SLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARV-LFDEMED 535
S++ AC+ + G HG ++ GL+ + F G +LLS+Y C V +F+ +
Sbjct: 143 SVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ 202
Query: 536 KSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILS------ACSQLSAL 589
+ VS+ +I G ++ +EA+ +FR M GVQ + + +ILS C LS +
Sbjct: 203 PNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEI 262
Query: 590 ---RLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAII 646
LGK+ HC AL+ D + S++++YAK + + +F + + +V SWN +I
Sbjct: 263 YGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMI 322
Query: 647 GGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAV 706
G G +++E +M G +P+ T + +L AC +G VE G + FS +
Sbjct: 323 VGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP----- 377
Query: 707 KPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEE---ADAGIWSSLLRSCRTYGALKMGEK 763
+P + + ++ ++A +M + D S +L SC L+ G++
Sbjct: 378 QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQ 437
Query: 764 VAKTLLELEPDKAENYV 780
+ ++ E K + V
Sbjct: 438 IHGVVIRTEISKNSHIV 454
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 153/322 (47%), Gaps = 10/322 (3%)
Query: 62 KEATGVLLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVF 121
K V+L +C + +E GK++H ++ T+ S + I + LI +YS C S +F
Sbjct: 416 KTTLSVILSSCARLRFLEGGKQIHGVV-IRTEISKNSHIVSGLIAVYSECEKMEISECIF 474
Query: 122 DS-LKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIAD 180
D + ++ WN+++SGF N L L +F + L P+ +F V+ +C +
Sbjct: 475 DDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCS 534
Query: 181 VSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICG 240
+ G HG+ K G + D FV AL MY KC ++ + F+ + +N V WN +I G
Sbjct: 535 LLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHG 594
Query: 241 SSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKL-GL 299
NG E+ L KM+ G PD T V+VL C+ G V+ G+ + ++ G+
Sbjct: 595 YGHNGRGDEAVGLYRKMI--SSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGI 652
Query: 300 TRELMVNNALVDMYAKCGFLSEAQILFDKNNNK-NVVSWNTIIGAFSMAGDVCGTFDLLR 358
EL +VD + G L +A+ L + K + V W ++ + + GDV L R
Sbjct: 653 EPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDV----SLAR 708
Query: 359 KMQMKEEEMKPNEVTVLNVLTS 380
++ K + P +L++
Sbjct: 709 RVAEKLMRLDPQSSAAYVLLSN 730
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/569 (38%), Positives = 339/569 (59%), Gaps = 2/569 (0%)
Query: 377 VLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRT 436
+L +C +K L + +H + ++ + + ++ Y KC A V M +
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 437 VSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHG 496
V SW A+I Y+Q G +AL F +M SD +P+ F+ +++ +C L GK+IHG
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177
Query: 497 FVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVE 556
+++ + F G SLL +Y + AR +F+ + ++ +VS +IAGY+Q L E
Sbjct: 178 LIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 237
Query: 557 AIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIID 616
A+ +F R+ S G+ P ++ S+L+A S L+ L GK+ HC+ L+ L A + S+ID
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 297
Query: 617 MYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGH-KPDTF 675
MY+KCG L +RR+FD + ++ SWNA++ G+ HG G+E +ELF M KPD
Sbjct: 298 MYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAV 357
Query: 676 TFVGILMACNHAGLVENGLKYFSQM-QKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLII 734
T + +L C+H + + GL F M + KP EHY C+VDMLGRAG++D+AF+ I
Sbjct: 358 TLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIK 417
Query: 735 EMPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDD 794
MP + AG+ SLL +CR + ++ +GE V + L+E+EP+ A NYV++SN+YA + +W D
Sbjct: 418 RMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWAD 477
Query: 795 VRMMRQRMKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQISKIGY 854
V +R M ++ + KE G SWI+ +H F D HP EE+ + ++ + GY
Sbjct: 478 VNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGY 537
Query: 855 KPYTEAVLHELEEEEKVNILRGHSEKLAISFGLLKTTKDLTLRVCKNLRICVDCHNAAKL 914
P VL++++EE+K +L GHSEKLA++FGL+ T + + +RV KNLRICVDCHN AK+
Sbjct: 538 VPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKI 597
Query: 915 ISKVAEREIVIRDNKRFHHFRDGVCSCGD 943
SKV ERE+ +RD RFH DG+CSCGD
Sbjct: 598 FSKVFEREVSLRDKNRFHQIVDGICSCGD 626
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 174/315 (55%), Gaps = 5/315 (1%)
Query: 68 LLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 127
LL AC ++ + G+RVH + T++ + TRL+ Y C D+R+V D + +
Sbjct: 58 LLNACLDKRALRDGQRVHAHM-IKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 128 NLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGV 187
N+ W A++S +++ + L++F E++ ++ KP+ FTF V+ +C + + G +
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMR-SDGKPNEFTFATVLTSCIRASGLGLGKQI 175
Query: 188 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFS 247
HG+ K +FV ++L+ MY K ++E ++FE +PER++VS +II G ++ G
Sbjct: 176 HGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLD 235
Query: 248 CESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNN 307
E+ ++ ++ EG P+ T ++L +G +D G H ++ L ++ N
Sbjct: 236 EEALEMFHRLH--SEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN 293
Query: 308 ALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEM 367
+L+DMY+KCG LS A+ LFD + +SWN ++ +S G +L R M+ E+ +
Sbjct: 294 SLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMR-DEKRV 352
Query: 368 KPNEVTVLNVLTSCS 382
KP+ VT+L VL+ CS
Sbjct: 353 KPDAVTLLAVLSGCS 367
Score = 164 bits (414), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 165/334 (49%), Gaps = 7/334 (2%)
Query: 253 LLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDM 312
L + M+G E GF +L C + + G VH +K + L+
Sbjct: 41 LEMAMLGPEMGF----HGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIF 96
Query: 313 YAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEV 372
Y KC L +A+ + D+ KNVVSW +I +S G + +M + KPNE
Sbjct: 97 YGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVF--AEMMRSDGKPNEF 154
Query: 373 TVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGM 432
T VLTSC S L K++HG ++ +D+ V ++ + YAK G A +F +
Sbjct: 155 TFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECL 214
Query: 433 DSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGK 492
R V S A+I GYAQ G +AL+ F ++ + P+ + SL+ A + L L GK
Sbjct: 215 PERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGK 274
Query: 493 EIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNK 552
+ H V+R L + SL+ +Y C S AR LFD M +++ +SWN M+ GYS++
Sbjct: 275 QAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHG 334
Query: 553 LPVEAIVLFRRMFS-IGVQPCEISIVSILSACSQ 585
L E + LFR M V+P ++++++LS CS
Sbjct: 335 LGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSH 368
Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 163/318 (51%), Gaps = 5/318 (1%)
Query: 168 FPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMP 227
+ ++ AC + G VH K + ++ L+ YGKC +E+ K+ + MP
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 228 ERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLG 287
E+N+VSW ++I S+ G S E+ + +MM + P+ T TVL C + LG
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK--PNEFTFATVLTSCIRASGLGLG 172
Query: 288 ILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMA 347
+HGL VK + V ++L+DMYAK G + EA+ +F+ ++VVS II ++
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL 232
Query: 348 GDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDEL 407
G ++ ++ E M PN VT ++LT+ S + L K+ H + LR +
Sbjct: 233 GLDEEALEMFHRLH--SEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAV 290
Query: 408 VANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYF-LQMTHS 466
+ N+ + Y+KCG+ A +F M RT SWNA++ GY+++G + L+ F L
Sbjct: 291 LQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEK 350
Query: 467 DLEPDLFSIGSLILACTH 484
++PD ++ +++ C+H
Sbjct: 351 RVKPDAVTLLAVLSGCSH 368
Score = 153 bits (386), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 156/301 (51%), Gaps = 10/301 (3%)
Query: 460 FLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMH 519
L+M E +L+ AC ++L G+ +H +I+ ++ LL Y
Sbjct: 40 LLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGK 99
Query: 520 CEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSI 579
C+ AR + DEM +K++VSW MI+ YSQ EA+ +F M +P E + ++
Sbjct: 100 CDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATV 159
Query: 580 LSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDV 639
L++C + S L LGK+ H +K + FV S++DMYAK G ++++R +F+ L ++DV
Sbjct: 160 LTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDV 219
Query: 640 TSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQ 699
S AII G+ G +EA+E+F ++ + G P+ T+ +L A + L+++G +
Sbjct: 220 VSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHG-----K 274
Query: 700 MQKLHAVKPKLEHYAC----VVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTY 755
H ++ +L YA ++DM + G L A +L MPE A W+++L +
Sbjct: 275 QAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERT-AISWNAMLVGYSKH 333
Query: 756 G 756
G
Sbjct: 334 G 334
Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 157/331 (47%), Gaps = 6/331 (1%)
Query: 66 GVLLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLK 125
+L +C + +GK++H LI + + + + L+ MY+ G ++R +F+ L
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLI-VKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
Query: 126 TRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGS 185
R++ A+++G+ + L + L +F L S+ + P+ T+ ++ A G+A + G
Sbjct: 216 ERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEG-MSPNYVTYASLLTALSGLALLDHGK 274
Query: 186 GVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENG 245
H + L + N+LI MY KC + +LF+ MPER +SWN+++ G S++G
Sbjct: 275 QAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHG 334
Query: 246 FSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHG--LAVKLGLTREL 303
E +L ++M E+ PD T++ VL C+ D G+ + +A + G
Sbjct: 335 LGREVLELF-RLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGT 393
Query: 304 MVNNALVDMYAKCGFLSEAQILFDKNNNKNVVS-WNTIIGAFSMAGDVCGTFDLLRKMQM 362
+VDM + G + EA + +K +++GA + V + R++
Sbjct: 394 EHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIE 453
Query: 363 KEEEMKPNEVTVLNVLTSCSEKSELLSLKEL 393
E E N V + N+ S +++ +++ +
Sbjct: 454 IEPENAGNYVILSNLYASAGRWADVNNVRAM 484
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/588 (39%), Positives = 345/588 (58%), Gaps = 8/588 (1%)
Query: 364 EEEMKP--------NEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVA 415
+EE+ P N V +L C+ ++ K HG +R + D + N + A
Sbjct: 46 QEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINA 105
Query: 416 YAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSI 475
Y+KCG A VF GM R++ SWN +I Y +N +ALD FL+M + + F+I
Sbjct: 106 YSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTI 165
Query: 476 GSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMED 535
S++ AC K++H ++ ++ + + G +LL LY C A +F+ M+D
Sbjct: 166 SSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQD 225
Query: 536 KSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKET 595
KS V+W++M+AGY QNK EA++L+RR + ++ + ++ S++ ACS L+AL GK+
Sbjct: 226 KSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQM 285
Query: 596 HCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYG 655
H K+ ++ FVA S +DMYAKCG L +S +F +++K++ WN II G H
Sbjct: 286 HAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARP 345
Query: 656 KEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYAC 715
KE + LFEKM G P+ TF +L C H GLVE G ++F M+ + + P + HY+C
Sbjct: 346 KEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSC 405
Query: 716 VVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDK 775
+VD+LGRAG L +A++LI +P + A IW SLL SCR Y L++ E A+ L ELEP+
Sbjct: 406 MVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPEN 465
Query: 776 AENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEW 835
A N+VL+SNIYA +++W+++ R+ +++ ++K G SWI++ +H+F VG++ HP
Sbjct: 466 AGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRI 525
Query: 836 EEIRGMWGRLEEQISKIGYKPYTEAVLHELEEEEKVNILRGHSEKLAISFGLLKTTKDLT 895
EI L + K GYKP E LH++E +K +L HSEKLA+ FGL+ +
Sbjct: 526 REICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSP 585
Query: 896 LRVCKNLRICVDCHNAAKLISKVAEREIVIRDNKRFHHFRDGVCSCGD 943
+R+ KNLRICVDCH K S R I++RD RFHHF DG CSCGD
Sbjct: 586 VRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGD 633
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 203/381 (53%), Gaps = 12/381 (3%)
Query: 274 VLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKN 333
+L +CA G V HG +++ L ++ + N L++ Y+KCGF+ A+ +FD ++
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 334 VVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKEL 393
+VSWNT+IG ++ D+ ++M+ E K +E T+ +VL++C + L K+L
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIF--LEMRNEGFKFSEFTISSVLSACGVNCDALECKKL 184
Query: 394 HGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDH 453
H S++ D + V A + YAKCG A VF M ++ +W++++ GY QN ++
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNY 244
Query: 454 LKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISL 513
+AL + + LE + F++ S+I AC++L +L GK++H + ++G + F S
Sbjct: 245 EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSA 304
Query: 514 LSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCE 573
+ +Y C + ++F E+++K+L WNT+I+G++++ P E ++LF +M G+ P E
Sbjct: 305 VDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNE 364
Query: 574 ISIVSILSACSQLSALRLGKE-----THCYALKAILTNDAFVACSIIDMYAKCGCLEQSR 628
++ S+LS C + G+ Y L N +C ++D+ + G L ++
Sbjct: 365 VTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSP---NVVHYSC-MVDILGRAGLLSEAY 420
Query: 629 RVFDRLK-DKDVTSWNAIIGG 648
+ + D + W +++
Sbjct: 421 ELIKSIPFDPTASIWGSLLAS 441
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 166/322 (51%), Gaps = 4/322 (1%)
Query: 171 VIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERN 230
+++ C V HG ++ L GDV + N LI Y KC FVE ++F+ M ER+
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 231 LVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILV 290
LVSWN++I + N E+ D+ ++M EGF T+ +VL C + +
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRN--EGFKFSEFTISSVLSACGVNCDALECKKL 184
Query: 291 HGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDV 350
H L+VK + L V AL+D+YAKCG + +A +F+ +K+ V+W++++ + +
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNY 244
Query: 351 CGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVAN 410
L R+ Q ++ N+ T+ +V+ +CS + L+ K++H + GF ++ VA+
Sbjct: 245 EEALLLYRRAQ--RMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVAS 302
Query: 411 AFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEP 470
+ V YAKCGS + +F + + + WN +I G+A++ + + F +M + P
Sbjct: 303 SAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHP 362
Query: 471 DLFSIGSLILACTHLKSLHRGK 492
+ + SL+ C H + G+
Sbjct: 363 NEVTFSSLLSVCGHTGLVEEGR 384
Score = 152 bits (385), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 159/314 (50%), Gaps = 6/314 (1%)
Query: 68 LLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 127
+LQ C + K H I D + LI YS CGF +R+VFD + R
Sbjct: 67 ILQLCARNGAVMEAKACHGKI-IRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLER 125
Query: 128 NLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGV 187
+L WN ++ +T+N + + L IF+E+ ++ K FT V+ ACG D +
Sbjct: 126 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEG-FKFSEFTISSVLSACGVNCDALECKKL 184
Query: 188 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFS 247
H ++ K + +++V AL+ +Y KC +++ V++FE M +++ V+W+S++ G +N
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNY 244
Query: 248 CESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNN 307
E+ LL+ + T+ +V+ C+ + G +H + K G + V +
Sbjct: 245 EEA--LLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVAS 302
Query: 308 ALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEM 367
+ VDMYAKCG L E+ I+F + KN+ WNTII F+ L KMQ ++ M
Sbjct: 303 SAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQ--QDGM 360
Query: 368 KPNEVTVLNVLTSC 381
PNEVT ++L+ C
Sbjct: 361 HPNEVTFSSLLSVC 374
Score = 120 bits (300), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 147/283 (51%), Gaps = 7/283 (2%)
Query: 41 ESKSLNKALSLLQENLHNADLKEATGVLLQACGHEKDIEIGKRVHELISASTQFSNDFII 100
ES++L+ L + E ++ ++ +L ACG D K++H +S T + +
Sbjct: 143 ESEALDIFLEMRNEGFKFSEFTISS--VLSACGVNCDALECKKLH-CLSVKTCIDLNLYV 199
Query: 101 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTE 160
T L+ +Y+ CG D+ +VF+S++ ++ W+++V+G+ +N+ Y + L ++
Sbjct: 200 GTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLY-RRAQRMS 258
Query: 161 LKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV 220
L+ + FT VI AC +A + G +H + K G +VFV+++ + MY KC + E
Sbjct: 259 LEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESY 318
Query: 221 KLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAG 280
+F + E+NL WN+II G +++ E L KM ++G P+ T ++L VC
Sbjct: 319 IIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQ--QDGMHPNEVTFSSLLSVCGH 376
Query: 281 EGNVDLGILVHGLA-VKLGLTRELMVNNALVDMYAKCGFLSEA 322
G V+ G L GL+ ++ + +VD+ + G LSEA
Sbjct: 377 TGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 419
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/661 (34%), Positives = 375/661 (56%), Gaps = 5/661 (0%)
Query: 286 LGILVHGLAVK-LGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAF 344
LG +VH VK L + N L++MY+K A+++ +NVVSW ++I
Sbjct: 24 LGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGL 83
Query: 345 SMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDN 404
+ G + L+ +M+ E + PN+ T + + ++ K++H +++ G
Sbjct: 84 AQNGHF--STALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRIL 141
Query: 405 DELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMT 464
D V + Y K A +F + R + +WNA I +G +A++ F++
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201
Query: 465 HSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSS 524
D P+ + + + AC+ L+ G ++HG V+R+G + D L+ Y C++
Sbjct: 202 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 261
Query: 525 SARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACS 584
S+ ++F EM K+ VSW +++A Y QN +A VL+ R V+ + I S+LSAC+
Sbjct: 262 SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACA 321
Query: 585 QLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNA 644
++ L LG+ H +A+KA + FV +++DMY KCGC+E S + FD + +K++ + N+
Sbjct: 322 GMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNS 381
Query: 645 IIGGHGIHGYGKEAIELFEKML--ALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQK 702
+IGG+ G A+ LFE+M G P+ TFV +L AC+ AG VENG+K F M+
Sbjct: 382 LIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRS 441
Query: 703 LHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYGALKMGE 762
+ ++P EHY+C+VDMLGRAG ++ A++ I +MP + +W +L +CR +G ++G
Sbjct: 442 TYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501
Query: 763 KVAKTLLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGCSWIELGGNI 822
A+ L +L+P + N+VL+SN +A + +W + +R+ +K G++K AG SWI + +
Sbjct: 502 LAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQV 561
Query: 823 HSFVVGDNMHPEWEEIRGMWGRLEEQISKIGYKPYTEAVLHELEEEEKVNILRGHSEKLA 882
H+F D H +EI+ +L ++ GYKP + L++LEEEEK + HSEKLA
Sbjct: 562 HAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLA 621
Query: 883 ISFGLLKTTKDLTLRVCKNLRICVDCHNAAKLISKVAEREIVIRDNKRFHHFRDGVCSCG 942
++FGLL + +R+ KNLRIC DCH+ K +S +REI++RDN RFH F+DG+CSC
Sbjct: 622 LAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCK 681
Query: 943 D 943
D
Sbjct: 682 D 682
Score = 191 bits (484), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 213/435 (48%), Gaps = 9/435 (2%)
Query: 63 EATGVLLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFD 122
+A G+LL+ + +G+ VH I + + LI MYS P +R V
Sbjct: 7 DALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLR 66
Query: 123 SLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVS 182
RN+ W +L+SG +N + L F E+ + + P++FTFPC KA +
Sbjct: 67 LTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREG-VVPNDFTFPCAFKAVASLRLPV 125
Query: 183 FGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSS 242
G +H +A K G I DVFV + MY K ++ KLF+ +PERNL +WN+ I S
Sbjct: 126 TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSV 185
Query: 243 ENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRE 302
+G E+ + I+ + P+ T L C+ +++LG+ +HGL ++ G +
Sbjct: 186 TDGRPREAIEAFIEFRRIDGH--PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTD 243
Query: 303 LMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAG-DVCGTFDLLRKMQ 361
+ V N L+D Y KC + ++I+F + KN VSW +++ A+ D + LR
Sbjct: 244 VSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRS-- 301
Query: 362 MKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGS 421
+++ ++ ++ + +VL++C+ + L + +H ++++ + V +A V Y KCG
Sbjct: 302 -RKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGC 360
Query: 422 EISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDL--EPDLFSIGSLI 479
+E F M + + + N+LI GYA G AL F +M P+ + SL+
Sbjct: 361 IEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLL 420
Query: 480 LACTHLKSLHRGKEI 494
AC+ ++ G +I
Sbjct: 421 SACSRAGAVENGMKI 435
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 442 bits (1137), Expect = e-123, Method: Compositional matrix adjust.
Identities = 254/704 (36%), Positives = 402/704 (57%), Gaps = 44/704 (6%)
Query: 280 GEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQI--------------- 324
E ++ G +H L VK + ++N V++Y+KCG LS A+
Sbjct: 20 AERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNV 79
Query: 325 ----------------LFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMK 368
LFD+ + VS+NT+I ++ A + L ++M+ E+
Sbjct: 80 IVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEV- 138
Query: 369 PNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENV 428
+ T+ ++ +C ++ +L+ K+LH +S+ GFD+ V NAFV Y+K G A +V
Sbjct: 139 -DGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSV 195
Query: 429 FHGMDS-RTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKS 487
F+GMD R SWN++I Y Q+ + KAL + +M + D+F++ S++ A T L
Sbjct: 196 FYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDH 255
Query: 488 LHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHC---EKSSSARVLFDEMEDKSLVSWNTM 544
L G++ HG +I+ G +S G L+ Y C + + +F E+ LV WNTM
Sbjct: 256 LIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTM 315
Query: 545 IAGYSQNK-LPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKA- 602
I+GYS N+ L EA+ FR+M IG +P + S V + SACS LS+ K+ H A+K+
Sbjct: 316 ISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSH 375
Query: 603 ILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELF 662
I +N V ++I +Y K G L+ +R VFDR+ + + S+N +I G+ HG+G EA+ L+
Sbjct: 376 IPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLY 435
Query: 663 EKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGR 722
++ML G P+ TFV +L AC H G V+ G +YF+ M++ ++P+ EHY+C++D+LGR
Sbjct: 436 QRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGR 495
Query: 723 AGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAENYVLV 782
AGKL++A + I MP + + W++LL +CR + + + E+ A L+ ++P A YV++
Sbjct: 496 AGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVML 555
Query: 783 SNIYAGSEKWDDVRMMRQRMKERGLQKEAGCSWIELGGNIHSFVVGDNMHPEWEEIRGMW 842
+N+YA + KW+++ +R+ M+ + ++K+ GCSWIE+ H FV D HP E+
Sbjct: 556 ANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYL 615
Query: 843 GRLEEQISKIGY---KPYTEAVLHELEEEEKVNILRGHSEKLAISFGLLKTTKDLTLRVC 899
+ +++ K+GY K + E E ++ L HSEKLA++FGL+ T L V
Sbjct: 616 EEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVV 675
Query: 900 KNLRICVDCHNAAKLISKVAEREIVIRDNKRFHHFRDGVCSCGD 943
KNLRIC DCHNA K +S VA REI++RDN RFH F+DG CSCGD
Sbjct: 676 KNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGD 719
Score = 147 bits (371), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 215/455 (47%), Gaps = 43/455 (9%)
Query: 75 EKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNA 134
E+D+ GK +H L S S+ ++ N + +YS CG +R F S + N+F +N
Sbjct: 21 ERDLFTGKSLHALYVKSIVASSTYLSN-HFVNLYSKCGRLSYARAAFYSTEEPNVFSYNV 79
Query: 135 LVSGFTKN-------ELY-----PDVLS------------------IFVELLSDTELKPD 164
+V + K+ +L+ PD +S + + + + D
Sbjct: 80 IVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVD 139
Query: 165 NFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFE 224
FT +I AC D+ +H + G V+NA + Y K + E V +F
Sbjct: 140 GFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFY 197
Query: 225 VMPE-RNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGN 283
M E R+ VSWNS+I ++ ++ L +M+ +GF D+ T+ +VL +
Sbjct: 198 GMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIF--KGFKIDMFTLASVLNALTSLDH 255
Query: 284 VDLGILVHGLAVKLGLTRELMVNNALVDMYAKCG---FLSEAQILFDKNNNKNVVSWNTI 340
+ G HG +K G + V + L+D Y+KCG + +++ +F + + ++V WNT+
Sbjct: 256 LIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTM 315
Query: 341 IGAFSMAGDVCGTFDLLRKM-QMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLR 399
I +SM ++ + + ++ QM+ +P++ + + V ++CS S K++HG +++
Sbjct: 316 ISGYSMNEEL--SEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIK 373
Query: 400 HGFDNDEL-VANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALD 458
++ + V NA + Y K G+ A VF M S+N +I GYAQ+G +AL
Sbjct: 374 SHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALL 433
Query: 459 YFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKE 493
+ +M S + P+ + +++ AC H + G+E
Sbjct: 434 LYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQE 468
Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 180/400 (45%), Gaps = 43/400 (10%)
Query: 377 VLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRT 436
+L S +E+ +L + K LH ++ + ++N FV Y+KCG A F+ +
Sbjct: 15 LLKSVAER-DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN 73
Query: 437 V-------------------------------SSWNALICGYAQNGDHLKALDYFLQMTH 465
V S+N LI GYA + A+ F +M
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRK 133
Query: 466 SDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSS 525
E D F++ LI AC L K++H F + G + S + ++ Y
Sbjct: 134 LGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLRE 191
Query: 526 ARVLF---DEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSA 582
A +F DE+ D+ VSWN+MI Y Q+K +A+ L++ M G + ++ S+L+A
Sbjct: 192 AVSVFYGMDELRDE--VSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249
Query: 583 CSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKC-GC--LEQSRRVFDRLKDKDV 639
+ L L G++ H +KA ++ V +ID Y+KC GC + S +VF + D+
Sbjct: 250 LTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDL 309
Query: 640 TSWNAIIGGHGIH-GYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFS 698
WN +I G+ ++ +EA++ F +M +GH+PD +FV + AC++ +
Sbjct: 310 VVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHG 369
Query: 699 QMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPE 738
K H ++ ++ + ++G L DA + MPE
Sbjct: 370 LAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPE 409
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 158/321 (49%), Gaps = 14/321 (4%)
Query: 68 LLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSL-KT 126
L+ AC +++ K++H S S F + +N +T YS G ++ VF + +
Sbjct: 146 LIAACCDR--VDLIKQLH-CFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDEL 202
Query: 127 RNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSG 186
R+ WN+++ + +++ L+++ E++ K D FT V+ A + + G
Sbjct: 203 RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKG-FKIDMFTLASVLNALTSLDHLIGGRQ 261
Query: 187 VHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMV---KLFEVMPERNLVSWNSIICGSSE 243
HG K G + V + LI Y KC + M K+F+ + +LV WN++I G S
Sbjct: 262 FHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSM 321
Query: 244 NG-FSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGL-TR 301
N S E+ +M G PD + V V C+ + +HGLA+K + +
Sbjct: 322 NEELSEEAVKSFRQMQRI--GHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSN 379
Query: 302 ELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQ 361
+ VNNAL+ +Y K G L +A+ +FD+ N VS+N +I ++ G GT LL +
Sbjct: 380 RISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGH--GTEALLLYQR 437
Query: 362 MKEEEMKPNEVTVLNVLTSCS 382
M + + PN++T + VL++C+
Sbjct: 438 MLDSGIAPNKITFVAVLSACA 458
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 140/271 (51%), Gaps = 13/271 (4%)
Query: 81 GKRVH-ELISASTQFSNDFIINTRLITMYSLCGF---PLDSRRVFDSLKTRNLFQWNALV 136
G++ H +LI A F + + + LI YS CG DS +VF + + +L WN ++
Sbjct: 259 GRQFHGKLIKAG--FHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMI 316
Query: 137 SGFTKNE-LYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMG 195
SG++ NE L + + F ++ +PD+ +F CV AC ++ S +HG+A K
Sbjct: 317 SGYSMNEELSEEAVKSFRQM-QRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSH 375
Query: 196 LIGD-VFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLL 254
+ + + V+NALI++Y K +++ +F+ MPE N VS+N +I G +++G E+ L
Sbjct: 376 IPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLY 435
Query: 255 IKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGI-LVHGLAVKLGLTRELMVNNALVDMY 313
+M+ + G P+ T V VL CA G VD G + + + E + ++D+
Sbjct: 436 QRML--DSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLL 493
Query: 314 AKCGFLSEAQILFDKNNNK-NVVSWNTIIGA 343
+ G L EA+ D K V+W ++GA
Sbjct: 494 GRAGKLEEAERFIDAMPYKPGSVAWAALLGA 524
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 114/240 (47%), Gaps = 38/240 (15%)
Query: 478 LILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARV--------- 528
L+L + L GK +H +++ + ++ ++LY C + S AR
Sbjct: 14 LLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN 73
Query: 529 ----------------------LFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFS 566
LFDE+ VS+NT+I+GY+ + A+VLF+RM
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRK 133
Query: 567 IGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQ 626
+G + ++ +++AC + L K+ HC+++ + + V + + Y+K G L +
Sbjct: 134 LGFEVDGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLRE 191
Query: 627 SRRVF---DRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMA 683
+ VF D L+D+ SWN++I +G H G +A+ L+++M+ G K D FT +L A
Sbjct: 192 AVSVFYGMDELRDE--VSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 441 bits (1135), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/723 (33%), Positives = 379/723 (52%), Gaps = 72/723 (9%)
Query: 291 HGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDV 350
H +K G + ++ L+ Y+ ++A ++ + + S++++I A + A
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 351 CGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVAN 410
+ + +M + P+ + N+ C+E S K++H S G D D V
Sbjct: 98 TQSIGVFSRM--FSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 411 AFVVAYAKCGSEISAENVFHGMDSRTVS-------------------------------- 438
+ Y +CG A VF M + V
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 439 ---SWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIH 495
SWN ++ G+ ++G H +A+ F ++ H PD ++ S++ + + L+ G+ IH
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 496 GFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEME--------------------D 535
G+VI+ GL D +++ +Y LF++ E D
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 536 KSL---------------VSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSIL 580
K+L VSW ++IAG +QN +EA+ LFR M GV+P ++I S+L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 581 SACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVT 640
AC ++AL G+ TH +A++ L ++ V ++IDMYAKCG + S+ VF+ + K++
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455
Query: 641 SWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQM 700
WN+++ G +HG KE + +FE ++ KPD +F +L AC GL + G KYF M
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 701 QKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYGALKM 760
+ + +KP+LEHY+C+V++LGRAGKL +A+ LI EMP E D+ +W +LL SCR + +
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575
Query: 761 GEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGCSWIELGG 820
E A+ L LEP+ YVL+SNIYA W +V +R +M+ GL+K GCSWI++
Sbjct: 576 AEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635
Query: 821 NIHSFVVGDNMHPEWEEIRGMWGRLEEQISKIGYKPYTEAVLHELEEEEKVNILRGHSEK 880
+++ + GD HP+ ++I + +++ K G++P + LH++EE+E+ +L GHSEK
Sbjct: 636 RVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEK 695
Query: 881 LAISFGLLKTTKDLTLRVCKNLRICVDCHNAAKLISKVAEREIVIRDNKRFHHFRDGVCS 940
LA+ FGLL T L+V KNLRIC DCH K IS A REI IRD RFHHF+DG+CS
Sbjct: 696 LAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICS 755
Query: 941 CGD 943
CGD
Sbjct: 756 CGD 758
Score = 169 bits (429), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 207/458 (45%), Gaps = 77/458 (16%)
Query: 96 NDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVEL 155
ND I+ +LI YS D+ V S+ ++ +++L+ TK +L+ + +F +
Sbjct: 48 NDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRM 107
Query: 156 LSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAF 215
S L PD+ P + K C ++ G +H ++ GL D FV ++ MY +C
Sbjct: 108 FSHG-LIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGR 166
Query: 216 VEEMVKLFEVMPER-----------------------------------NLVSWNSIICG 240
+ + K+F+ M ++ N+VSWN I+ G
Sbjct: 167 MGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSG 226
Query: 241 SSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLT 300
+ +G+ E+ + K+ GF PD TV +VLP +++G L+HG +K GL
Sbjct: 227 FNRSGYHKEAVVMFQKIH--HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLL 284
Query: 301 RELMVNNALVDMYAKCGFLSEAQILF---------------------------------- 326
++ V +A++DMY K G + LF
Sbjct: 285 KDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELF 344
Query: 327 -DKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKS 385
++ NVVSW +II + G +L R+MQ+ +KPN VT+ ++L +C +
Sbjct: 345 KEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG--VKPNHVTIPSMLPACGNIA 402
Query: 386 ELLSLKELHGYSLR-HGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALI 444
L + HG+++R H DN V +A + YAKCG ++ VF+ M ++ + WN+L+
Sbjct: 403 ALGHGRSTHGFAVRVHLLDNVH-VGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLM 461
Query: 445 CGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILAC 482
G++ +G + + F + + L+PD S SL+ AC
Sbjct: 462 NGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSAC 499
Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 131/536 (24%), Positives = 244/536 (45%), Gaps = 86/536 (16%)
Query: 188 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFS 247
H K G D ++S LIA Y + + + +P+ + S++S+I ++
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 248 CESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNN 307
+S + +M G IPD + + VCA +G +H ++ GL + V
Sbjct: 98 TQSIGVFSRMF--SHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 308 ALVDMYAKCGFLSEAQILFDKNNNK----------------------------------- 332
++ MY +CG + +A+ +FD+ ++K
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 333 NVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKE 392
N+VSWN I+ F+ +G + +K+ P++VTV +VL S + SE+L++
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIH--HLGFCPDQVTVSSVLPSVGD-SEMLNMGR 272
Query: 393 L-HGYSLRHGFDNDELVANAFVVAYAKCGSE---ISAENVFHGMD-----------SR-- 435
L HGY ++ G D+ V +A + Y K G IS N F M+ SR
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 436 -------------------TVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIG 476
V SW ++I G AQNG ++AL+ F +M + ++P+ +I
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 477 SLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDK 536
S++ AC ++ +L G+ HGF +R L + G +L+ +Y C + + ++++F+ M K
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 537 SLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKE-- 594
+LV WN+++ G+S + E + +F + ++P IS S+LSAC Q+ G +
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 595 ---THCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLK-DKDVTSWNAII 646
+ Y +K L + +C ++++ + G L+++ + + + D W A++
Sbjct: 513 KMMSEEYGIKPRLEH---YSC-MVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 177/389 (45%), Gaps = 82/389 (21%)
Query: 68 LLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 127
L + C ++GK++H +S + D + + MY CG D+R+VFD + +
Sbjct: 122 LFKVCAELSAFKVGKQIH-CVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK 180
Query: 128 -----------------------------------NLFQWNALVSGFTKNELYPDVLSIF 152
N+ WN ++SGF ++ + + + +F
Sbjct: 181 DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMF 240
Query: 153 VELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGK 212
+ + PD T V+ + G ++ G +HG K GL+ D V +A+I MYGK
Sbjct: 241 -QKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGK 299
Query: 213 C-------------------------------AFVEEMVKLFEVMPER----NLVSWNSI 237
V++ +++FE+ E+ N+VSW SI
Sbjct: 300 SGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSI 359
Query: 238 ICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKL 297
I G ++NG E+ +L +M G P+ T+ ++LP C + G HG AV++
Sbjct: 360 IAGCAQNGKDIEALELFREMQ--VAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRV 417
Query: 298 GLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAG---DVCGTF 354
L + V +AL+DMYAKCG ++ +QI+F+ KN+V WN+++ FSM G +V F
Sbjct: 418 HLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIF 477
Query: 355 DLLRKMQMKEEEMKPNEVTVLNVLTSCSE 383
+ L + + +KP+ ++ ++L++C +
Sbjct: 478 ESLMRTR-----LKPDFISFTSLLSACGQ 501
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/484 (22%), Positives = 210/484 (43%), Gaps = 77/484 (15%)
Query: 392 ELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNG 451
+ H L+ G ND ++ + +Y+ A+ V + T+ S+++LI +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 452 DHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGI 511
+++ F +M L PD + +L C L + GK+IH +GL+ D+F
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 512 SLLSLYMHCEKSSSARVLFDEMEDK----------------------------------- 536
S+ +YM C + AR +FD M DK
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 537 SLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETH 596
++VSWN +++G++++ EA+V+F+++ +G P ++++ S+L + L +G+ H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 597 CYALKAILTNDAFVACSIIDMYAKC-------------------------------GCLE 625
Y +K L D V ++IDMY K G ++
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 626 QSRRVFDRLKDK----DVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGIL 681
++ +F+ K++ +V SW +II G +G EA+ELF +M G KP+ T +L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 682 MACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEAD 741
AC + + +G ++H + + + ++DM + G+++ + +++ M +
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLD-NVHVGSALIDMYAKCGRINLS-QIVFNMMPTKN 453
Query: 742 AGIWSSLLRSCRTYGALKMGEKVAKTLL--ELEPDKAENYVLVS---NIYAGSEKWDDVR 796
W+SL+ +G K + ++L+ L+PD L+S + E W +
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 513
Query: 797 MMRQ 800
MM +
Sbjct: 514 MMSE 517
Score = 123 bits (309), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 160/338 (47%), Gaps = 47/338 (13%)
Query: 490 RGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYS 549
+ + H ++++G + D + L++ Y + + A ++ + D ++ S++++I +
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 550 QNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAF 609
+ KL ++I +F RMFS G+ P + ++ C++LSA ++GK+ HC + + L DAF
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 610 VACSIIDMYAKCGCLEQSRRVFDRLKDKDV------------------------------ 639
V S+ MY +CG + +R+VFDR+ DKDV
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 640 -----TSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGL 694
SWN I+ G GY KEA+ +F+K+ LG PD T +L + + ++ G
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 695 KYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRT 754
+ K +K K + ++DM G++G + L + E +AG+ ++ +
Sbjct: 273 LIHGYVIKQGLLKDKCV-ISAMIDMYGKSGHVYGIISLFNQF-EMMEAGVCNAYITGLSR 330
Query: 755 YG----ALKMGEKVAKTLLELEPDKAENYVLVSNIYAG 788
G AL+M E + +EL N V ++I AG
Sbjct: 331 NGLVDKALEMFELFKEQTMEL------NVVSWTSIIAG 362
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 100/196 (51%), Gaps = 4/196 (2%)
Query: 128 NLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGV 187
N+ W ++++G +N + L +F E+ +KP++ T P ++ ACG IA + G
Sbjct: 352 NVVSWTSIIAGCAQNGKDIEALELFREM-QVAGVKPNHVTIPSMLPACGNIAALGHGRST 410
Query: 188 HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFS 247
HG A ++ L+ +V V +ALI MY KC + +F +MP +NLV WNS++ G S +G +
Sbjct: 411 HGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKA 470
Query: 248 CESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGI-LVHGLAVKLGLTRELMVN 306
E + +M PD + ++L C G D G ++ + G+ L
Sbjct: 471 KEVMSIFESLM--RTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY 528
Query: 307 NALVDMYAKCGFLSEA 322
+ +V++ + G L EA
Sbjct: 529 SCMVNLLGRAGKLQEA 544
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 247/845 (29%), Positives = 456/845 (53%), Gaps = 30/845 (3%)
Query: 104 LITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKP 163
L+++Y ++R++FD + R +F W ++S FTK++ + LS+F E+++ + P
Sbjct: 64 LLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMA-SGTHP 122
Query: 164 DNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLF 223
+ FTF V+++C G+ D+S+G VHG K G G+ V ++L +Y KC +E +LF
Sbjct: 123 NEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELF 182
Query: 224 EVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGN 283
+ + +SW +I E+ +M+ + G P+ T V +L + G
Sbjct: 183 SSLQNADTISWTMMISSLVGARKWREALQFYSEMV--KAGVPPNEFTFVKLLGASSFLG- 239
Query: 284 VDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGA 343
++ G +H + G+ +++ +LVD Y++ + +A + + + ++V W +++
Sbjct: 240 LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSG 299
Query: 344 FSM---AGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRH 400
F A + GTF ++M+ ++PN T +L+ CS L K++H +++
Sbjct: 300 FVRNLRAKEAVGTF-----LEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKV 354
Query: 401 GFDNDELVANAFVVAYAKC-GSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDY 459
GF++ V NA V Y KC SE+ A VF M S V SW LI G +G
Sbjct: 355 GFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGL 414
Query: 460 FLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMH 519
++M ++EP++ ++ ++ AC+ L+ + R EIH +++R ++G+ G SL+ Y
Sbjct: 415 LMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYAS 474
Query: 520 CEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSI 579
K A + M+ + +++ +++ +++ A+ + M+ G++ ++S+
Sbjct: 475 SRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGF 534
Query: 580 LSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDV 639
+SA + L AL GK HCY++K+ + A V S++DMY+KCG LE +++VF+ + DV
Sbjct: 535 ISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDV 594
Query: 640 TSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQ 699
SWN ++ G +G+ A+ FE+M +PD+ TF+ +L AC++ L + GL+YF
Sbjct: 595 VSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQV 654
Query: 700 MQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYGALK 759
M+K++ ++P++EHY +V +LGRAG+L++A ++ M + +A I+ +LLR+CR G L
Sbjct: 655 MKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLS 714
Query: 760 MGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGCSWIELG 819
+GE +A L L P Y+L++++Y S K + + R M E+ L K+ G S +E+
Sbjct: 715 LGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQ 774
Query: 820 GNIHSFVVGDNMHPEWEEIRGMWGRLE---EQISKIGYKPYTEAVLHELEEEEKVNILRG 876
G +HSFV D ++ G++ +E E+I + G PY E +
Sbjct: 775 GKVHSFVSEDVTRV--DKTNGIYAEIESIKEEIKRFG-SPY--------RGNENASF--- 820
Query: 877 HSEKLAISFGLLKTTKDLTLRVCKNLRICVDCHNAAKLISKVAEREIVIRDNKRFHHFRD 936
HS K A+ +G + + + + V KN +C DCH +++++ +++I +RD + H F++
Sbjct: 821 HSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKN 880
Query: 937 GVCSC 941
G CSC
Sbjct: 881 GECSC 885
Score = 200 bits (508), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 177/688 (25%), Positives = 308/688 (44%), Gaps = 70/688 (10%)
Query: 184 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSE 243
G +H K GL+ ++ + N L+++Y K + KLF+ M R + +W +I ++
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 244 NGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTREL 303
+ + L +MM G P+ T +V+ CAG ++ G VHG +K G
Sbjct: 102 SQEFASALSLFEEMMA--SGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNS 159
Query: 304 MVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMK 363
+V ++L D+Y+KCG EA LF N + +SW +I + + G +Q
Sbjct: 160 VVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISS------LVGARKWREALQFY 213
Query: 364 EEEMK----PNEVTVLNVLTSCSEKSELLSL---KELHGYSLRHGFDNDELVANAFVVAY 416
E +K PNE T + +L + S L L K +H + G + ++ + V Y
Sbjct: 214 SEMVKAGVPPNEFTFVKLLGA----SSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFY 269
Query: 417 AKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIG 476
++ A V + + V W +++ G+ +N +A+ FL+M L+P+ F+
Sbjct: 270 SQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYS 329
Query: 477 SLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSS-SARVLFDEMED 535
+++ C+ ++SL GK+IH I+ G E + G +L+ +YM C S A +F M
Sbjct: 330 AILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVS 389
Query: 536 KSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKET 595
++VSW T+I G + + L M V+P +++ +L ACS+L +R E
Sbjct: 390 PNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEI 449
Query: 596 HCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYG 655
H Y L+ + + V S++D YA ++ + V +K +D ++ +++ G
Sbjct: 450 HAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKH 509
Query: 656 KEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLH--AVKPKLEHY 713
+ A+ + M G + D + G + A + G +E G + LH +VK
Sbjct: 510 EMALSVINYMYGDGIRMDQLSLPGFISASANLGALETG-------KHLHCYSVKSGFSGA 562
Query: 714 ACV----VDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLRSCRTYG----ALKMGEKVA 765
A V VDM + G L+DA K+ E+ D W+ L+ + G AL E++
Sbjct: 563 ASVLNSLVDMYSKCGSLEDAKKVFEEIA-TPDVVSWNGLVSGLASNGFISSALSAFEEM- 620
Query: 766 KTLLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQKEAGCSWIELGGNIHSF 825
+ E EPD +L+S G R+ + GL+ + ++ I+
Sbjct: 621 -RMKETEPDSVTFLILLSACSNG------------RLTDLGLE------YFQVMKKIY-- 659
Query: 826 VVGDNMHPEWEE------IRGMWGRLEE 847
N+ P+ E I G GRLEE
Sbjct: 660 ----NIEPQVEHYVHLVGILGRAGRLEE 683
Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/494 (25%), Positives = 235/494 (47%), Gaps = 7/494 (1%)
Query: 272 VTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNN 331
+ +L C + +G+ +H +K GL L + N L+ +Y K + A+ LFD+ ++
Sbjct: 28 IRILSFCESNSS-RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSH 86
Query: 332 KNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLK 391
+ V +W +I AF+ + + L +M PNE T +V+ SC+ ++
Sbjct: 87 RTVFAWTVMISAFTKSQEFASALSLFEEMMASGTH--PNEFTFSSVVRSCAGLRDISYGG 144
Query: 392 ELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNG 451
+HG ++ GF+ + +V ++ Y+KCG A +F + + SW +I
Sbjct: 145 RVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGAR 204
Query: 452 DHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFTGI 511
+AL ++ +M + + P+ F+ L+ A + L L GK IH +I G+ +
Sbjct: 205 KWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLNVVLKT 263
Query: 512 SLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGVQP 571
SL+ Y K A + + ++ + W ++++G+ +N EA+ F M S+G+QP
Sbjct: 264 SLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQP 323
Query: 572 CEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLE-QSRRV 630
+ +ILS CS + +L GK+ H +K + V +++DMY KC E ++ RV
Sbjct: 324 NNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRV 383
Query: 631 FDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLV 690
F + +V SW +I G HG+ ++ L +M+ +P+ T G+L AC+ V
Sbjct: 384 FGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHV 443
Query: 691 ENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLLR 750
L+ + + + H V ++ +VD + K+D A+ +I M + D ++SL+
Sbjct: 444 RRVLEIHAYLLRRH-VDGEMVVGNSLVDAYASSRKVDYAWNVIRSM-KRRDNITYTSLVT 501
Query: 751 SCRTYGALKMGEKV 764
G +M V
Sbjct: 502 RFNELGKHEMALSV 515
Score = 179 bits (455), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 209/408 (51%), Gaps = 7/408 (1%)
Query: 78 IEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVS 137
+E GK +H I + ++ T L+ YS D+ RV +S +++F W ++VS
Sbjct: 240 LEFGKTIHSNIIVR-GIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVS 298
Query: 138 GFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLI 197
GF +N + + F+E+ S L+P+NFT+ ++ C + + FG +H K+G
Sbjct: 299 GFVRNLRAKEAVGTFLEMRS-LGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFE 357
Query: 198 GDVFVSNALIAMYGKCAFVE-EMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIK 256
V NAL+ MY KC+ E E ++F M N+VSW ++I G ++GF + F LL++
Sbjct: 358 DSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLME 417
Query: 257 MMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKC 316
M+ E P+V T+ VL C+ +V + +H ++ + E++V N+LVD YA
Sbjct: 418 MVKRE--VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASS 475
Query: 317 GFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLN 376
+ A + ++ +++ +++ F+ G ++ M + ++ +++++
Sbjct: 476 RKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVIN--YMYGDGIRMDQLSLPG 533
Query: 377 VLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRT 436
+++ + L + K LH YS++ GF V N+ V Y+KCGS A+ VF + +
Sbjct: 534 FISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPD 593
Query: 437 VSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTH 484
V SWN L+ G A NG AL F +M + EPD + L+ AC++
Sbjct: 594 VVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSN 641
Score = 157 bits (396), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 213/481 (44%), Gaps = 47/481 (9%)
Query: 363 KEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSE 422
+ E+ + + + +L+ C S + L +H ++ G + + N + Y K
Sbjct: 16 RTNELGNLQKSCIRILSFCESNSSRIGL-HIHCPVIKFGLLENLDLCNNLLSLYLKTDGI 74
Query: 423 ISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILAC 482
+A +F M RTV +W +I + ++ + AL F +M S P+ F+ S++ +C
Sbjct: 75 WNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSC 134
Query: 483 THLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWN 542
L+ + G +HG VI+ G EG+S G SL LY C + A LF +++ +SW
Sbjct: 135 AGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWT 194
Query: 543 TMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKA 602
MI+ + EA+ + M GV P E + V +L A S L L GK H +
Sbjct: 195 MMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVR 253
Query: 603 ILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELF 662
+ + + S++D Y++ +E + RV + ++DV W +++ G + KEA+ F
Sbjct: 254 GIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTF 313
Query: 663 EKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKL------------------- 703
+M +LG +P+ FT+ IL C+ ++ G + SQ K+
Sbjct: 314 LEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKC 373
Query: 704 ------------HAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPE---EADAGIWSSL 748
V P + + ++ L G + D F L++EM + E + S +
Sbjct: 374 SASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGV 433
Query: 749 LRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSN----IYAGSEK----WDDVRMMRQ 800
LR+C ++ ++ LL D ++V N YA S K W+ +R M++
Sbjct: 434 LRACSKLRHVRRVLEIHAYLLRRHVDGE---MVVGNSLVDAYASSRKVDYAWNVIRSMKR 490
Query: 801 R 801
R
Sbjct: 491 R 491
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 68 LLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTR 127
+ A + +E GK +H S + FS + L+ MYS CG D+++VF+ + T
Sbjct: 534 FISASANLGALETGKHLH-CYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATP 592
Query: 128 NLFQWNALVSGFTKNELYPDVLSIFVEL-LSDTELKPDNFTFPCVIKAC 175
++ WN LVSG N LS F E+ + +TE PD+ TF ++ AC
Sbjct: 593 DVVSWNGLVSGLASNGFISSALSAFEEMRMKETE--PDSVTFLILLSAC 639
>sp|Q9LUL5|PP229_ARATH Pentatricopeptide repeat-containing protein At3g14330
OS=Arabidopsis thaliana GN=PCMP-H57 PE=2 SV=2
Length = 710
Score = 437 bits (1123), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/555 (41%), Positives = 335/555 (60%), Gaps = 8/555 (1%)
Query: 393 LHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGM-DSRTVSS--WNALICGYAQ 449
L+ SLRH N +L++ + ++ C A +F + DS ++ W A+ GY++
Sbjct: 158 LNNPSLRH---NPKLLSK-LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSR 213
Query: 450 NGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEIHGFVIRNGLEGDSFT 509
NG AL ++ M S +EP FSI + AC LK L G+ IH +++ + D
Sbjct: 214 NGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVV 273
Query: 510 GISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGV 569
LL LYM AR +FD M ++++V+WN++I+ S+ E LFR+M +
Sbjct: 274 YNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMI 333
Query: 570 QPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRR 629
++ +IL ACS+++AL GKE H LK+ D + S++DMY KCG +E SRR
Sbjct: 334 GFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRR 393
Query: 630 VFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGL 689
VFD + KD+ SWN ++ + I+G +E I LFE M+ G PD TFV +L C+ GL
Sbjct: 394 VFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGL 453
Query: 690 VENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLL 749
E GL F +M+ V P LEHYAC+VD+LGRAGK+ +A K+I MP + A IW SLL
Sbjct: 454 TEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLL 513
Query: 750 RSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQK 809
SCR +G + +GE AK L LEP NYV+VSNIYA ++ WD+V +R+ MK+RG++K
Sbjct: 514 NSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKK 573
Query: 810 EAGCSWIELGGNIHSFVVGDNMH-PEWEEIRGMWGRLEEQISKIGYKPYTEAVLHELEEE 868
EAGCSW+++ I FV G +E + +W L+E I K GY P T VLH+++EE
Sbjct: 574 EAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEE 633
Query: 869 EKVNILRGHSEKLAISFGLLKTTKDLTLRVCKNLRICVDCHNAAKLISKVAEREIVIRDN 928
K N + GHSE+LA ++ L+ T + + +R+ KNLR+C DCH+ K++S+V R IV+RD
Sbjct: 634 TKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDT 693
Query: 929 KRFHHFRDGVCSCGD 943
KRFHHF DG+CSC D
Sbjct: 694 KRFHHFVDGICSCKD 708
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 184/349 (52%), Gaps = 11/349 (3%)
Query: 41 ESKSLNKALSLLQENLHNADL---KEATGVLLQACGHEKDIEIGKRVHELISASTQFSND 97
+S L++A++L++ + + EA LL AC K + G ++ LI + ++
Sbjct: 107 KSTKLDEAVTLIENSSSSPSNLSTPEAYTDLLHACISAKSLHHGIKICSLILNNPSLRHN 166
Query: 98 FIINTRLITMYSLCGFPLDSRRVFDSLKTRNLFQ---WNALVSGFTKNELYPDVLSIFVE 154
+ ++LIT++S+C +R++FD + +L W A+ G+++N D L ++V+
Sbjct: 167 PKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVD 226
Query: 155 LLSDTELKPDNFTFPCVIKACGGIADVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCA 214
+L + ++P NF+ +KAC + D+ G G+H K D V N L+ +Y +
Sbjct: 227 MLC-SFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESG 285
Query: 215 FVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTV 274
++ K+F+ M ERN+V+WNS+I S+ E F+L KM GF AT+ T+
Sbjct: 286 LFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGF--SWATLTTI 343
Query: 275 LPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNV 334
LP C+ + G +H +K ++ + N+L+DMY KCG + ++ +FD K++
Sbjct: 344 LPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDL 403
Query: 335 VSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSE 383
SWN ++ +++ G++ +L M E + P+ +T + +L+ CS+
Sbjct: 404 ASWNIMLNCYAINGNIEEVINLFE--WMIESGVAPDGITFVALLSGCSD 450
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 145/282 (51%), Gaps = 9/282 (3%)
Query: 206 LIAMYGKCAFVEEMVKLFEVMPERNLVS---WNSIICGSSENGFSCESFDLLIKMMGCEE 262
LI ++ C ++ K+F+ + + +L++ W ++ G S NG ++ + + M+ C
Sbjct: 173 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDML-C-- 229
Query: 263 GFI-PDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSE 321
FI P ++ L C ++ +G +H VK + +V N L+ +Y + G +
Sbjct: 230 SFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDD 289
Query: 322 AQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSC 381
A+ +FD + +NVV+WN++I S V F+L RKMQ EE + + T+ +L +C
Sbjct: 290 ARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ--EEMIGFSWATLTTILPAC 347
Query: 382 SEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWN 441
S + LL+ KE+H L+ D + N+ + Y KCG + VF M ++ ++SWN
Sbjct: 348 SRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWN 407
Query: 442 ALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACT 483
++ YA NG+ + ++ F M S + PD + +L+ C+
Sbjct: 408 IMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCS 449
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 185/420 (44%), Gaps = 47/420 (11%)
Query: 64 ATGVLLQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDS 123
+ V L+AC KD+ +G+ +H I + + + N L+ +Y G D+R+VFD
Sbjct: 238 SISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNV-LLKLYMESGLFDDARKVFDG 296
Query: 124 LKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSF 183
+ RN+ WN+L+S +K ++ ++F ++ + + T ++ AC +A +
Sbjct: 297 MSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEM-IGFSWATLTTILPACSRVAALLT 355
Query: 184 GSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSE 243
G +H K DV + N+L+ MYGKC VE ++F+VM ++L SWN ++ +
Sbjct: 356 GKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAI 415
Query: 244 NGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTREL 303
NG E +L M+ E G PD T V +L C+ D G+ +GL++ + E
Sbjct: 416 NGNIEEVINLFEWMI--ESGVAPDGITFVALLSGCS-----DTGLTEYGLSLFERMKTEF 468
Query: 304 MVNNA------LVDMYAKCGFLSEAQILFDKNNNKNVVS-WNTIIGAFSMAGDVCGTFDL 356
V+ A LVD+ + G + EA + + K S W +++ + + G+V
Sbjct: 469 RVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIA 528
Query: 357 LRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELH---------------------- 394
+++ + E N V V N+ + ++E+
Sbjct: 529 AKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQI 588
Query: 395 -----GYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQ 449
GY R+ D + V A K G + V H +D T ++W +CG+++
Sbjct: 589 FVAGGGYEFRNS-DEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANW---VCGHSE 644
Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 138/284 (48%), Gaps = 8/284 (2%)
Query: 470 PDLFSIGSLILACTHLKSLHRGKEIHGFVIRN-GLEGDSFTGISLLSLYMHCEKSSSARV 528
P+ ++ L+ AC KSLH G +I ++ N L + L++L+ C + AR
Sbjct: 131 PEAYT--DLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARK 188
Query: 529 LFDEMEDKSLVS---WNTMIAGYSQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQ 585
+FD++ D SL++ W M GYS+N P +A++++ M ++P SI L AC
Sbjct: 189 IFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVD 248
Query: 586 LSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAI 645
L LR+G+ H +K D V ++ +Y + G + +R+VFD + +++V +WN++
Sbjct: 249 LKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSL 308
Query: 646 IGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHA 705
I E LF KM T IL AC+ + G + +Q+ K
Sbjct: 309 ISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKE 368
Query: 706 VKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLL 749
KP + ++DM G+ G+++ + + + ++ D W+ +L
Sbjct: 369 -KPDVPLLNSLMDMYGKCGEVEYS-RRVFDVMLTKDLASWNIML 410
>sp|Q9FXH1|PPR52_ARATH Pentatricopeptide repeat-containing protein At1g19720
OS=Arabidopsis thaliana GN=DYW7 PE=2 SV=1
Length = 894
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 286/944 (30%), Positives = 481/944 (50%), Gaps = 97/944 (10%)
Query: 12 KSSLSLSAK--TNNASTEGLHFLQEITTLCEESKSLNKALSLLQENLHNADLKEATGV-L 68
K +LS + K N E +L +L E K+L+ SL Q+ + +K +T + L
Sbjct: 34 KKNLSFTKKKEPNIIPDEQFDYLCRNGSLLEAEKALD---SLFQQG---SKVKRSTYLKL 87
Query: 69 LQACGHEKDIEIGKRVHELISASTQFSNDFIINTRLITMYSLCGFPLDSRRVFDSLKTRN 128
L++C I +G+ +H T+ D + T+L++MY+ CG D+R+VFDS++ RN
Sbjct: 88 LESCIDSGSIHLGRILHARFGLFTE--PDVFVETKLLSMYAKCGCIADARKVFDSMRERN 145
Query: 129 LFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIADVSFGSGVH 188
LF W+A++ +++ + +V +F ++ D L PD+F FP +++ C DV G +H
Sbjct: 146 LFTWSAMIGAYSRENRWREVAKLFRLMMKDGVL-PDDFLFPKILQGCANCGDVEAGKVIH 204
Query: 189 GMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSC 248
+ K+G+ + VSN+++A+Y KC ++ K F M ER++++WNS++ +NG
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHE 264
Query: 249 ESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNA 308
E+ +L+ +M +EG P G V IL+ G +L +A
Sbjct: 265 EAVELVKEME--KEGISP---------------GLVTWNILIGGY-------NQLGKCDA 300
Query: 309 LVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMK 368
+D+ K + I D V +W +I G D+ RKM + +
Sbjct: 301 AMDLMQK---METFGITAD------VFTWTAMISGLIHNGMRYQALDMFRKMFLA--GVV 349
Query: 369 PNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENV 428
PN VT+++ +++CS + E+H +++ GF +D LV N+ V Y+KCG A V
Sbjct: 350 PNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKV 409
Query: 429 FHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSL 488
F + ++ V +WN++I GY Q G KA + F +M ++L P++ + ++
Sbjct: 410 FDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTM---------- 459
Query: 489 HRGKEIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGY 548
I G+ I+NG EG++ + L+ EK + ++ +WN +IAGY
Sbjct: 460 -----ISGY-IKNGDEGEA------MDLFQRMEKDGKVQ--------RNTATWNLIIAGY 499
Query: 549 SQNKLPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDA 608
QN EA+ LFR+M P ++I+S+L AC+ L ++ +E H L+ L
Sbjct: 500 IQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIH 559
Query: 609 FVACSIIDMYAKCGCLEQSRRVFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLAL 668
V ++ D YAK G +E SR +F ++ KD+ +WN++IGG+ +HG A+ LF +M
Sbjct: 560 AVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQ 619
Query: 669 GHKPDTFTFVGILMACNHAGLVENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDD 728
G P+ T I++A G V+ G K F + + + P LEH + +V + GRA +L++
Sbjct: 620 GITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEE 679
Query: 729 AFKLIIEMPEEADAGIWSSLLRSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAG 788
A + I EM +++ IW S L CR +G + M A+ L LEP+ +VS IYA
Sbjct: 680 ALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYAL 739
Query: 789 SEKWDDVRMMRQRMKERGLQKEAGCSWIELGGNIHSFVVGDN-------MHPEWEEIRGM 841
K + ++ L+K G SWIE+ IH+F GD ++P E++ +
Sbjct: 740 GAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSRL 799
Query: 842 WGRLEEQISKIGYKPYTEAVLHELEEEEKVNILRGHSEKLAISFGLLKTT--KDLTLRVC 899
R ++ ++ +EEE + HSEK A++FGL+ ++ T+R+
Sbjct: 800 DNRSDQYNGELW-----------IEEEGREETCGIHSEKFAMAFGLISSSGASKTTIRIL 848
Query: 900 KNLRICVDCHNAAKLISKVAEREIVIRDNKRFHHFRDGVCSCGD 943
KNLR+C DCH+ AK +SK +I++ D + HHF++G CSC D
Sbjct: 849 KNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKD 892
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/615 (37%), Positives = 351/615 (57%), Gaps = 44/615 (7%)
Query: 367 MKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFDNDELVANAFVVAYAKCGSEIS-- 424
++ N ++ L CS++ EL K++H L+ G D F+ + C S S
Sbjct: 10 LEHNLYETMSCLQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFL---SFCISSTSSD 63
Query: 425 ----AENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLIL 480
A+ VF G D WN +I G++ + + ++L + +M S + ++ SL+
Sbjct: 64 FLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLK 123
Query: 481 ACTHLKSLHRGKEIHGFVIRNGLEGDSFTGISLLSLY----------------------- 517
AC++L + +IH + + G E D + SL++ Y
Sbjct: 124 ACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVS 183
Query: 518 --------MHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNKLPVEAIVLFRRMFSIGV 569
+ K A LF +M +K+ +SW TMI+GY Q + EA+ LF M + V
Sbjct: 184 WNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDV 243
Query: 570 QPCEISIVSILSACSQLSALRLGKETHCYALKAILTNDAFVACSIIDMYAKCGCLEQSRR 629
+P +S+ + LSAC+QL AL GK H Y K + D+ + C +IDMYAKCG +E++
Sbjct: 244 EPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALE 303
Query: 630 VFDRLKDKDVTSWNAIIGGHGIHGYGKEAIELFEKMLALGHKPDTFTFVGILMACNHAGL 689
VF +K K V +W A+I G+ HG+G+EAI F +M +G KP+ TF +L AC++ GL
Sbjct: 304 VFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGL 363
Query: 690 VENGLKYFSQMQKLHAVKPKLEHYACVVDMLGRAGKLDDAFKLIIEMPEEADAGIWSSLL 749
VE G F M++ + +KP +EHY C+VD+LGRAG LD+A + I EMP + +A IW +LL
Sbjct: 364 VEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 423
Query: 750 RSCRTYGALKMGEKVAKTLLELEPDKAENYVLVSNIYAGSEKWDDVRMMRQRMKERGLQK 809
++CR + +++GE++ + L+ ++P YV +NI+A +KWD R+ MKE+G+ K
Sbjct: 424 KACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAK 483
Query: 810 EAGCSWIELGGNIHSFVVGDNMHPEWEEIRGMWGRLEEQISKIGYKPYTEAVLHEL-EEE 868
GCS I L G H F+ GD HPE E+I+ W + ++ + GY P E +L +L +++
Sbjct: 484 VPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDD 543
Query: 869 EKVNILRGHSEKLAISFGLLKTTKDLTLRVCKNLRICVDCHNAAKLISKVAEREIVIRDN 928
E+ I+ HSEKLAI++GL+KT +R+ KNLR+C DCH KLISK+ +R+IV+RD
Sbjct: 544 EREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDR 603
Query: 929 KRFHHFRDGVCSCGD 943
RFHHFRDG CSCGD
Sbjct: 604 TRFHHFRDGKCSCGD 618
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 189/422 (44%), Gaps = 52/422 (12%)
Query: 290 VHGLAVKLGLTRELMVNNALVDMYAKC------GFLSEAQILFDKNNNKNVVSWNTIIGA 343
+H +K GL ++ + A+ + C FL AQI+FD + + WN +I
Sbjct: 33 IHARMLKTGLMQD---SYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRG 89
Query: 344 FSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCSEKSELLSLKELHGYSLRHGFD 403
FS + + + L ++M N T ++L +CS S ++H + G++
Sbjct: 90 FSCSDEPERSLLLYQRMLCSSAPH--NAYTFPSLLKACSNLSAFEETTQIHAQITKLGYE 147
Query: 404 NDELVANAFVVAYA-------------------------------KCGSEISAENVFHGM 432
ND N+ + +YA K G A +F M
Sbjct: 148 NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM 207
Query: 433 DSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGK 492
+ SW +I GY Q + +AL F +M +SD+EPD S+ + + AC L +L +GK
Sbjct: 208 AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 267
Query: 493 EIHGFVIRNGLEGDSFTGISLLSLYMHCEKSSSARVLFDEMEDKSLVSWNTMIAGYSQNK 552
IH ++ + + DS G L+ +Y C + A +F ++ KS+ +W +I+GY+ +
Sbjct: 268 WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG 327
Query: 553 LPVEAIVLFRRMFSIGVQPCEISIVSILSACSQLSALRLGK-----ETHCYALKAILTND 607
EAI F M +G++P I+ ++L+ACS + GK Y LK + +
Sbjct: 328 HGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEH- 386
Query: 608 AFVACSIIDMYAKCGCLEQSRRVFDRLKDK-DVTSWNAIIGGHGIHGYGKEAIELFEKML 666
C I+D+ + G L++++R + K + W A++ IH + E+ E ++
Sbjct: 387 --YGC-IVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILI 443
Query: 667 AL 668
A+
Sbjct: 444 AI 445
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 157/349 (44%), Gaps = 45/349 (12%)
Query: 69 LQACGHEKDIEIGKRVHELISASTQFSNDFIINTRL---ITMYSLCGFPLDSRRVFDSLK 125
LQ C ++++ K++H + + + + I L I+ S P ++ VFD
Sbjct: 21 LQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPY-AQIVFDGFD 76
Query: 126 TRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDN-FTFPCVIKACGGIADVSFG 184
+ F WN ++ GF+ ++ L ++ +L + P N +TFP ++KAC ++
Sbjct: 77 RPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSS--APHNAYTFPSLLKACSNLSAFEET 134
Query: 185 SGVHGMAAKMGLIGDVFVSNALIAMYG-------------------------------KC 213
+ +H K+G DV+ N+LI Y K
Sbjct: 135 TQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKA 194
Query: 214 AFVEEMVKLFEVMPERNLVSWNSIICGSSENGFSCESFDLLIKMMGCEEGFIPDVATVVT 273
++ + LF M E+N +SW ++I G + + E+ L +M + PD ++
Sbjct: 195 GKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSD--VEPDNVSLAN 252
Query: 274 VLPVCAGEGNVDLGILVHGLAVKLGLTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKN 333
L CA G ++ G +H K + + ++ L+DMYAKCG + EA +F K+
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS 312
Query: 334 VVSWNTIIGAFSMAGDVCGTFDLLRKMQMKEEEMKPNEVTVLNVLTSCS 382
V +W +I ++ G G + + M+M++ +KPN +T VLT+CS
Sbjct: 313 VQAWTALISGYAYHGH--GREAISKFMEMQKMGIKPNVITFTAVLTACS 359
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 150/345 (43%), Gaps = 44/345 (12%)
Query: 187 VHGMAAKMGLIGDVFVSNALIAM---YGKCAFVEEMVKLFEVMPERNLVSWNSIICGSSE 243
+H K GL+ D + ++ F+ +F+ + WN +I
Sbjct: 33 IHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMI----- 87
Query: 244 NGFSC----ESFDLLIKMMGCEEGFIPDVA-TVVTVLPVCAGEGNVDLGILVHGLAVKLG 298
GFSC E LL + M C P A T ++L C+ + +H KLG
Sbjct: 88 RGFSCSDEPERSLLLYQRMLCSSA--PHNAYTFPSLLKACSNLSAFEETTQIHAQITKLG 145
Query: 299 LTRELMVNNALVDMYAKCGFLSEAQILFDKNNNKNVVSWNTIIGAFSMAGDVCGTFDLLR 358
++ N+L++ YA G A +LFD+ + VSWN++I + AG + L R
Sbjct: 146 YENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFR 205
Query: 359 KM-----------------------------QMKEEEMKPNEVTVLNVLTSCSEKSELLS 389
KM +M+ +++P+ V++ N L++C++ L
Sbjct: 206 KMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQ 265
Query: 390 LKELHGYSLRHGFDNDELVANAFVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQ 449
K +H Y + D ++ + YAKCG A VF + ++V +W ALI GYA
Sbjct: 266 GKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAY 325
Query: 450 NGDHLKALDYFLQMTHSDLEPDLFSIGSLILACTHLKSLHRGKEI 494
+G +A+ F++M ++P++ + +++ AC++ + GK I
Sbjct: 326 HGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 370
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 112/226 (49%), Gaps = 5/226 (2%)
Query: 120 VFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTELKPDNFTFPCVIKACGGIA 179
+F + +N W ++SG+ + ++ + L +F E+ +++++PDN + + AC +
Sbjct: 203 LFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEM-QNSDVEPDNVSLANALSACAQLG 261
Query: 180 DVSFGSGVHGMAAKMGLIGDVFVSNALIAMYGKCAFVEEMVKLFEVMPERNLVSWNSIIC 239
+ G +H K + D + LI MY KC +EE +++F+ + ++++ +W ++I
Sbjct: 262 ALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALIS 321
Query: 240 GSSENGFSCESFDLLIKMMGCEEGFIPDVATVVTVLPVCAGEGNVDLGILV-HGLAVKLG 298
G + +G E+ ++M + G P+V T VL C+ G V+ G L+ + +
Sbjct: 322 GYAYHGHGREAISKFMEMQ--KMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYN 379
Query: 299 LTRELMVNNALVDMYAKCGFLSEAQILFDKNNNK-NVVSWNTIIGA 343
L + +VD+ + G L EA+ + K N V W ++ A
Sbjct: 380 LKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 45 LNK-ALSLLQENLHNADLKEATGVL---LQACGHEKDIEIGKRVHELISASTQFSNDFII 100
+NK AL L E + N+D++ L L AC +E GK +H ++ T+ D ++
Sbjct: 227 MNKEALQLFHE-MQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLN-KTRIRMDSVL 284
Query: 101 NTRLITMYSLCGFPLDSRRVFDSLKTRNLFQWNALVSGFTKNELYPDVLSIFVELLSDTE 160
LI MY+ CG ++ VF ++K +++ W AL+SG+ + + +S F+E +
Sbjct: 285 GCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFME-MQKMG 343
Query: 161 LKPDNFTFPCVIKACGGIADVSFGSGV-HGMAAKMGLIGDVFVSNALIAMYGKCAFVEEM 219
+KP+ TF V+ AC V G + + M L + ++ + G+ ++E
Sbjct: 344 IKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEA 403
Query: 220 VKLFEVMP-ERNLVSWNSII 238
+ + MP + N V W +++
Sbjct: 404 KRFIQEMPLKPNAVIWGALL 423
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 344,411,836
Number of Sequences: 539616
Number of extensions: 14418669
Number of successful extensions: 45566
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 345
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 35867
Number of HSP's gapped (non-prelim): 2586
length of query: 953
length of database: 191,569,459
effective HSP length: 127
effective length of query: 826
effective length of database: 123,038,227
effective search space: 101629575502
effective search space used: 101629575502
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)