Query 037237
Match_columns 1267
No_of_seqs 196 out of 450
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 17:16:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037237.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037237hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2y6e_A Ubiquitin carboxyl-term 100.0 5.8E-46 2E-50 425.6 22.9 292 943-1267 9-338 (367)
2 3nhe_A Ubiquitin carboxyl-term 100.0 3.9E-45 1.3E-49 412.1 22.5 286 943-1267 10-322 (348)
3 2gfo_A Ubiquitin carboxyl-term 100.0 1.9E-44 6.5E-49 419.3 18.8 283 943-1267 63-375 (396)
4 3i3t_A Ubiquitin carboxyl-term 100.0 3.1E-44 1.1E-48 405.7 19.5 286 943-1267 4-330 (355)
5 2ayn_A Ubiquitin carboxyl-term 100.0 9.9E-44 3.4E-48 410.9 21.5 285 939-1267 11-366 (404)
6 1nb8_A Ubiquitin carboxyl-term 100.0 1.7E-43 6E-48 404.8 21.3 261 943-1267 7-279 (353)
7 3mhs_A Ubiquitin carboxyl-term 100.0 4.2E-42 1.4E-46 407.2 18.5 284 943-1267 142-453 (476)
8 1vjv_A Ubiquitin carboxyl-term 100.0 6E-42 2.1E-46 398.9 18.1 265 939-1267 21-386 (415)
9 2f1z_A Ubiquitin carboxyl-term 100.0 6.2E-41 2.1E-45 402.6 21.4 261 943-1267 176-448 (522)
10 3ihp_A Ubiquitin carboxyl-term 100.0 3.6E-38 1.2E-42 397.6 19.8 207 943-1175 345-597 (854)
11 2vhf_A Ubiquitin carboxyl-term 99.8 1.5E-20 5E-25 214.6 12.7 98 941-1054 8-114 (374)
12 2c2l_A CHIP, carboxy terminus 97.6 6.3E-05 2.1E-09 82.4 6.0 101 51-165 6-106 (281)
13 4gco_A Protein STI-1; structur 97.3 0.0005 1.7E-08 66.3 8.0 99 52-164 16-114 (126)
14 2h6f_A Protein farnesyltransfe 97.3 0.00023 7.8E-09 82.4 6.2 100 52-164 100-199 (382)
15 1hxi_A PEX5, peroxisome target 97.1 0.0012 4E-08 63.2 8.8 99 52-164 20-118 (121)
16 2xcb_A PCRH, regulatory protei 97.0 0.004 1.4E-07 60.3 10.8 106 47-166 16-121 (142)
17 2vgx_A Chaperone SYCD; alterna 96.9 0.0038 1.3E-07 61.7 10.6 106 47-166 19-124 (148)
18 3gyz_A Chaperone protein IPGC; 96.7 0.0044 1.5E-07 62.4 9.2 101 47-160 34-134 (151)
19 3sz7_A HSC70 cochaperone (SGT) 96.7 0.0051 1.7E-07 60.6 9.1 105 47-165 9-113 (164)
20 2lni_A Stress-induced-phosphop 96.6 0.0057 1.9E-07 56.4 8.4 100 47-159 14-113 (133)
21 3upv_A Heat shock protein STI1 96.5 0.0053 1.8E-07 57.5 7.8 96 51-159 6-101 (126)
22 4ga2_A E3 SUMO-protein ligase 96.5 0.0024 8.2E-08 63.1 5.6 99 54-166 36-135 (150)
23 2dba_A Smooth muscle cell asso 96.4 0.019 6.6E-07 53.9 11.2 103 48-164 27-132 (148)
24 1elw_A TPR1-domain of HOP; HOP 96.4 0.016 5.4E-07 51.9 9.6 102 49-164 4-105 (118)
25 3urz_A Uncharacterized protein 96.3 0.0056 1.9E-07 63.4 7.1 104 49-166 4-123 (208)
26 3rkv_A Putative peptidylprolyl 96.1 0.013 4.6E-07 57.5 8.5 104 47-164 9-130 (162)
27 2xev_A YBGF; tetratricopeptide 96.1 0.015 5.3E-07 53.8 8.2 98 53-164 6-109 (129)
28 2ho1_A Type 4 fimbrial biogene 96.1 0.0094 3.2E-07 61.7 7.4 98 48-158 36-133 (252)
29 3q49_B STIP1 homology and U bo 95.9 0.017 5.7E-07 54.2 7.8 98 49-159 9-106 (137)
30 2pl2_A Hypothetical conserved 95.9 0.019 6.4E-07 59.8 8.6 100 53-166 9-119 (217)
31 3urz_A Uncharacterized protein 95.7 0.036 1.2E-06 57.2 9.8 80 53-140 58-137 (208)
32 2vyi_A SGTA protein; chaperone 95.6 0.033 1.1E-06 50.5 8.4 104 47-164 10-113 (131)
33 2pl2_A Hypothetical conserved 95.6 0.039 1.3E-06 57.4 9.6 103 53-160 43-148 (217)
34 1a17_A Serine/threonine protei 95.5 0.04 1.4E-06 52.8 9.0 103 48-164 12-114 (166)
35 2fbn_A 70 kDa peptidylprolyl i 95.5 0.042 1.4E-06 55.8 9.4 103 48-164 37-155 (198)
36 1na0_A Designed protein CTPR3; 95.4 0.048 1.6E-06 49.0 8.6 101 50-164 10-110 (125)
37 3vtx_A MAMA; tetratricopeptide 95.4 0.083 2.8E-06 52.3 10.8 106 53-165 9-141 (184)
38 2e2e_A Formate-dependent nitri 95.2 0.038 1.3E-06 54.7 7.8 101 52-165 47-149 (177)
39 4gcn_A Protein STI-1; structur 95.2 0.032 1.1E-06 53.4 6.9 98 54-159 13-112 (127)
40 4i17_A Hypothetical protein; T 94.9 0.06 2.1E-06 55.4 8.5 102 50-165 8-110 (228)
41 3qou_A Protein YBBN; thioredox 94.8 0.17 5.6E-06 55.2 12.3 106 52-164 120-252 (287)
42 2kck_A TPR repeat; tetratricop 94.8 0.056 1.9E-06 47.9 7.0 94 54-160 11-107 (112)
43 2yhc_A BAMD, UPF0169 lipoprote 94.7 0.15 5E-06 53.1 10.8 110 50-165 42-181 (225)
44 3k9i_A BH0479 protein; putativ 94.5 0.0086 2.9E-07 55.9 0.9 91 61-165 2-95 (117)
45 2r5s_A Uncharacterized protein 94.5 0.096 3.3E-06 52.2 8.6 101 53-159 10-137 (176)
46 2y4t_A DNAJ homolog subfamily 94.3 0.099 3.4E-06 58.8 9.0 104 47-164 24-127 (450)
47 2vq2_A PILW, putative fimbrial 94.2 0.15 5.1E-06 50.9 9.2 105 48-167 7-112 (225)
48 4ga2_A E3 SUMO-protein ligase 94.0 0.016 5.6E-07 57.0 1.7 93 60-166 8-100 (150)
49 2fo7_A Synthetic consensus TPR 93.9 0.11 3.6E-06 47.0 6.9 93 54-159 6-98 (136)
50 1xnf_A Lipoprotein NLPI; TPR, 93.9 0.14 4.8E-06 53.1 8.8 104 48-165 42-145 (275)
51 2h6f_A Protein farnesyltransfe 93.8 0.091 3.1E-06 60.7 7.7 100 53-166 135-235 (382)
52 3mp2_A Non-structural protein 93.8 0.08 2.7E-06 56.8 6.4 25 1237-1265 164-190 (211)
53 2q7f_A YRRB protein; TPR, prot 93.7 0.035 1.2E-06 56.7 3.5 97 50-159 24-120 (243)
54 1elr_A TPR2A-domain of HOP; HO 93.6 0.16 5.6E-06 46.0 7.7 96 51-159 6-108 (131)
55 4i17_A Hypothetical protein; T 93.6 0.13 4.6E-06 52.7 7.8 99 53-159 46-146 (228)
56 4gyw_A UDP-N-acetylglucosamine 93.6 0.19 6.6E-06 63.0 10.5 103 49-165 9-111 (723)
57 3vtx_A MAMA; tetratricopeptide 93.4 0.23 7.9E-06 49.0 8.8 103 54-163 44-173 (184)
58 3ieg_A DNAJ homolog subfamily 93.4 0.24 8.1E-06 53.1 9.5 98 49-159 3-100 (359)
59 3qky_A Outer membrane assembly 93.3 0.19 6.6E-06 52.9 8.6 109 49-166 15-132 (261)
60 3ieg_A DNAJ homolog subfamily 93.3 0.25 8.5E-06 52.9 9.5 98 53-164 124-221 (359)
61 3qky_A Outer membrane assembly 93.2 0.27 9.1E-06 51.8 9.5 108 49-165 52-182 (261)
62 1wao_1 Serine/threonine protei 93.2 0.099 3.4E-06 61.9 6.8 96 55-164 12-107 (477)
63 1p5q_A FKBP52, FK506-binding p 93.1 0.19 6.4E-06 56.4 8.6 101 50-164 148-263 (336)
64 3hym_B Cell division cycle pro 92.9 0.16 5.6E-06 53.9 7.4 101 53-159 26-154 (330)
65 3hym_B Cell division cycle pro 92.8 0.27 9.4E-06 52.2 9.0 44 112-159 77-120 (330)
66 4eqf_A PEX5-related protein; a 92.8 0.17 5.9E-06 55.5 7.6 100 51-164 67-166 (365)
67 4gyw_A UDP-N-acetylglucosamine 92.8 0.15 5.2E-06 63.9 8.0 99 53-165 47-145 (723)
68 1zu2_A Mitochondrial import re 92.7 0.32 1.1E-05 50.0 8.8 99 63-163 16-123 (158)
69 3as5_A MAMA; tetratricopeptide 92.5 0.3 1E-05 46.9 8.0 100 47-159 6-105 (186)
70 1fch_A Peroxisomal targeting s 92.5 0.27 9.3E-06 53.5 8.6 102 52-167 67-168 (368)
71 3cv0_A Peroxisome targeting si 92.5 0.3 1E-05 51.8 8.7 103 51-167 23-125 (327)
72 2fe8_A PP1AB, ORF1AB, replicas 92.4 0.15 5.1E-06 57.8 6.4 28 1236-1266 262-291 (315)
73 1kt0_A FKBP51, 51 kDa FK506-bi 92.4 0.26 8.8E-06 57.8 8.7 101 51-165 270-385 (457)
74 2q7f_A YRRB protein; TPR, prot 92.3 0.35 1.2E-05 49.2 8.6 100 54-159 96-222 (243)
75 1hh8_A P67PHOX, NCF-2, neutrop 92.3 0.33 1.1E-05 48.8 8.4 98 50-160 38-151 (213)
76 3as5_A MAMA; tetratricopeptide 92.2 0.61 2.1E-05 44.6 9.8 97 50-159 43-139 (186)
77 3u4t_A TPR repeat-containing p 92.1 0.5 1.7E-05 49.1 9.7 107 53-166 7-143 (272)
78 3mkr_A Coatomer subunit epsilo 92.0 0.28 9.7E-06 53.8 8.0 101 55-167 136-236 (291)
79 1w3b_A UDP-N-acetylglucosamine 91.8 0.26 9E-06 54.6 7.5 97 54-164 4-100 (388)
80 1ihg_A Cyclophilin 40; ppiase 91.7 0.22 7.4E-06 57.1 6.9 99 52-164 226-340 (370)
81 2l6j_A TPR repeat-containing p 91.7 0.53 1.8E-05 41.9 8.2 82 50-140 5-86 (111)
82 2yhc_A BAMD, UPF0169 lipoprote 91.7 0.52 1.8E-05 48.9 9.2 106 52-166 7-131 (225)
83 2pzi_A Probable serine/threoni 91.4 0.31 1.1E-05 60.2 8.3 97 57-167 399-503 (681)
84 3uq3_A Heat shock protein STI1 91.2 0.42 1.4E-05 48.7 7.8 97 50-159 140-236 (258)
85 1hh8_A P67PHOX, NCF-2, neutrop 90.8 0.38 1.3E-05 48.4 6.9 97 52-165 9-105 (213)
86 2pzi_A Probable serine/threoni 90.6 0.39 1.3E-05 59.3 8.0 108 50-164 434-567 (681)
87 1na3_A Designed protein CTPR2; 90.4 0.5 1.7E-05 40.6 6.4 81 50-138 10-90 (91)
88 2fo7_A Synthetic consensus TPR 90.4 0.6 2.1E-05 41.9 7.2 94 53-159 39-132 (136)
89 2gw1_A Mitochondrial precursor 90.3 0.79 2.7E-05 52.1 9.8 99 49-161 6-104 (514)
90 4abn_A Tetratricopeptide repea 90.3 0.66 2.3E-05 54.4 9.4 105 51-164 172-291 (474)
91 3uq3_A Heat shock protein STI1 90.3 0.39 1.3E-05 49.0 6.5 102 49-164 79-206 (258)
92 2vsy_A XCC0866; transferase, g 90.3 0.43 1.5E-05 56.8 7.9 101 51-165 25-125 (568)
93 2vq2_A PILW, putative fimbrial 90.2 0.52 1.8E-05 47.0 7.2 95 53-159 46-142 (225)
94 4eqf_A PEX5-related protein; a 90.0 0.44 1.5E-05 52.2 7.2 95 52-159 216-310 (365)
95 2e2e_A Formate-dependent nitri 90.0 0.1 3.5E-06 51.5 1.8 94 58-165 19-115 (177)
96 2ho1_A Type 4 fimbrial biogene 89.9 0.79 2.7E-05 47.1 8.6 44 53-96 109-154 (252)
97 2if4_A ATFKBP42; FKBP-like, al 89.7 0.26 8.9E-06 55.3 5.0 108 49-167 179-300 (338)
98 2r5s_A Uncharacterized protein 89.6 0.25 8.5E-06 49.2 4.3 41 114-159 29-69 (176)
99 2y4t_A DNAJ homolog subfamily 89.6 0.79 2.7E-05 51.5 8.9 99 52-164 146-244 (450)
100 1fch_A Peroxisomal targeting s 89.6 0.68 2.3E-05 50.3 8.2 96 51-159 219-314 (368)
101 4abn_A Tetratricopeptide repea 89.5 0.57 2E-05 55.0 8.0 104 51-164 104-212 (474)
102 4g1t_A Interferon-induced prot 89.5 0.81 2.8E-05 51.9 9.0 111 47-164 136-246 (472)
103 2hr2_A Hypothetical protein; a 89.1 0.44 1.5E-05 49.1 5.7 101 53-167 15-138 (159)
104 3cv0_A Peroxisome targeting si 89.1 0.76 2.6E-05 48.6 7.8 95 53-160 176-270 (327)
105 2kc7_A BFR218_protein; tetratr 89.0 0.64 2.2E-05 41.1 6.2 67 53-127 4-71 (99)
106 3nf1_A KLC 1, kinesin light ch 88.9 0.51 1.8E-05 49.6 6.3 100 47-159 25-140 (311)
107 3mkr_A Coatomer subunit epsilo 88.1 0.87 3E-05 49.8 7.7 93 61-167 178-271 (291)
108 1a17_A Serine/threonine protei 88.0 1.1 3.6E-05 42.7 7.4 101 52-163 50-150 (166)
109 3u4t_A TPR repeat-containing p 87.9 1.3 4.5E-05 45.9 8.6 100 51-164 76-175 (272)
110 1w3b_A UDP-N-acetylglucosamine 87.6 0.97 3.3E-05 50.0 7.8 91 56-159 244-334 (388)
111 3mjh_B Early endosome antigen 87.0 0.32 1.1E-05 37.8 2.4 27 330-356 6-32 (34)
112 2kat_A Uncharacterized protein 86.7 0.99 3.4E-05 41.3 6.1 80 67-159 3-82 (115)
113 3fp2_A TPR repeat-containing p 86.6 1.2 3.9E-05 51.3 7.9 49 111-165 330-378 (537)
114 3fp2_A TPR repeat-containing p 86.3 0.82 2.8E-05 52.5 6.5 97 49-159 25-121 (537)
115 2vsy_A XCC0866; transferase, g 85.5 1.5 5.2E-05 52.0 8.4 102 52-164 60-161 (568)
116 3gyz_A Chaperone protein IPGC; 85.4 0.25 8.6E-06 49.4 1.4 82 72-167 25-106 (151)
117 4g1t_A Interferon-induced prot 85.0 2.2 7.6E-05 48.3 9.2 102 54-160 252-364 (472)
118 1p5q_A FKBP52, FK506-binding p 84.9 2.6 9E-05 47.0 9.6 85 49-141 196-280 (336)
119 2lni_A Stress-induced-phosphop 84.5 1.7 5.6E-05 39.5 6.5 82 50-139 51-132 (133)
120 1wao_1 Serine/threonine protei 84.0 1.8 6.1E-05 51.1 8.1 91 51-154 42-134 (477)
121 2vyi_A SGTA protein; chaperone 83.8 2.6 8.8E-05 37.7 7.3 82 51-140 48-129 (131)
122 2gw1_A Mitochondrial precursor 83.7 0.97 3.3E-05 51.4 5.4 105 53-164 342-482 (514)
123 4a1s_A PINS, partner of inscut 82.6 2.2 7.4E-05 47.3 7.6 100 47-159 46-155 (411)
124 1xnf_A Lipoprotein NLPI; TPR, 82.4 3.7 0.00013 42.3 8.8 94 53-160 81-174 (275)
125 1na0_A Designed protein CTPR3; 80.8 2.9 0.0001 37.0 6.4 78 52-137 46-123 (125)
126 4gco_A Protein STI-1; structur 80.7 1.9 6.5E-05 41.0 5.4 74 51-132 49-122 (126)
127 1paa_A Yeast transcription fac 79.6 0.93 3.2E-05 31.4 2.1 27 330-356 3-29 (30)
128 3k9i_A BH0479 protein; putativ 79.6 2.4 8.2E-05 39.0 5.6 76 48-131 26-101 (117)
129 2elm_A Zinc finger protein 406 79.5 1 3.5E-05 33.5 2.5 28 329-356 9-36 (37)
130 2kvh_A Zinc finger and BTB dom 79.4 1 3.5E-05 30.7 2.3 21 330-350 4-24 (27)
131 2xpi_A Anaphase-promoting comp 79.4 3 0.0001 48.7 7.7 100 53-166 479-585 (597)
132 1dce_A Protein (RAB geranylger 79.1 4 0.00014 49.5 8.8 106 50-159 29-138 (567)
133 1kt0_A FKBP51, 51 kDa FK506-bi 78.2 5.2 0.00018 46.7 9.2 91 49-152 317-407 (457)
134 3rkv_A Putative peptidylprolyl 77.9 3.8 0.00013 39.7 6.8 84 49-140 63-147 (162)
135 2elu_A Zinc finger protein 406 77.8 1.1 3.7E-05 34.3 2.0 24 331-354 11-34 (37)
136 1ard_A Yeast transcription fac 77.3 1.3 4.6E-05 30.1 2.4 25 330-355 3-27 (29)
137 3sz7_A HSC70 cochaperone (SGT) 76.0 3.5 0.00012 40.0 5.9 68 51-126 47-114 (164)
138 2ond_A Cleavage stimulation fa 75.4 2.3 7.8E-05 46.2 4.8 42 113-159 191-232 (308)
139 2m0e_A Zinc finger and BTB dom 75.4 1.2 4.2E-05 30.2 1.8 25 330-355 3-27 (29)
140 2adr_A ADR1; transcription reg 75.2 1.4 4.9E-05 36.0 2.4 29 329-357 30-58 (60)
141 3bee_A Putative YFRE protein; 75.0 5.3 0.00018 36.7 6.4 78 79-167 2-79 (93)
142 2fbn_A 70 kDa peptidylprolyl i 74.9 7.1 0.00024 39.1 8.0 84 50-141 89-172 (198)
143 2if4_A ATFKBP42; FKBP-like, al 74.9 1.6 5.5E-05 48.8 3.5 100 53-165 234-333 (338)
144 2xev_A YBGF; tetratricopeptide 74.4 5.7 0.00019 36.2 6.6 77 50-134 40-119 (129)
145 2vgx_A Chaperone SYCD; alterna 74.4 4.8 0.00017 39.2 6.4 74 53-134 59-132 (148)
146 2xcb_A PCRH, regulatory protei 74.3 4.6 0.00016 38.4 6.1 79 53-139 56-134 (142)
147 1ihg_A Cyclophilin 40; ppiase 74.2 6.9 0.00023 44.6 8.6 80 53-140 277-356 (370)
148 1elw_A TPR1-domain of HOP; HOP 74.2 5.4 0.00019 34.9 6.2 75 51-133 40-114 (118)
149 1znf_A 31ST zinc finger from X 74.2 1.6 5.6E-05 29.3 2.1 22 330-351 2-23 (27)
150 2m0f_A Zinc finger and BTB dom 74.0 1.8 6E-05 29.4 2.3 24 330-354 3-26 (29)
151 2dba_A Smooth muscle cell asso 73.7 5.6 0.00019 36.8 6.4 78 49-134 65-142 (148)
152 3upv_A Heat shock protein STI1 73.5 4.5 0.00015 37.2 5.7 77 50-134 39-121 (126)
153 3ro2_A PINS homolog, G-protein 73.5 7.3 0.00025 40.6 7.9 95 53-160 9-113 (338)
154 2m0d_A Zinc finger and BTB dom 73.1 1.9 6.5E-05 29.4 2.3 24 330-354 4-27 (30)
155 1rik_A E6APC1 peptide; E6-bind 72.8 2 6.9E-05 29.3 2.4 25 330-355 3-27 (29)
156 1srk_A Zinc finger protein ZFP 72.6 2.4 8.2E-05 30.6 2.8 27 329-356 7-33 (35)
157 3ma5_A Tetratricopeptide repea 72.2 2.9 9.9E-05 37.8 3.9 68 79-159 3-70 (100)
158 2kvg_A Zinc finger and BTB dom 72.1 1.7 5.9E-05 29.7 1.8 21 330-350 4-24 (27)
159 2xpi_A Anaphase-promoting comp 71.9 11 0.00036 44.1 9.6 96 56-165 380-475 (597)
160 2kvf_A Zinc finger and BTB dom 71.7 2 6.8E-05 29.2 2.1 21 330-350 4-24 (28)
161 1klr_A Zinc finger Y-chromosom 71.6 2.1 7.3E-05 29.2 2.2 23 330-352 3-25 (30)
162 1p7a_A BF3, BKLF, kruppel-like 71.0 2.4 8.1E-05 31.0 2.5 25 330-355 12-36 (37)
163 2elr_A Zinc finger protein 406 70.2 2.2 7.5E-05 30.9 2.1 25 329-354 9-33 (36)
164 2lvu_A Zinc finger and BTB dom 72.9 0.91 3.1E-05 30.6 0.0 22 330-351 3-24 (26)
165 2d9h_A Zinc finger protein 692 69.8 3.2 0.00011 35.8 3.5 29 329-357 38-66 (78)
166 3edt_B KLC 2, kinesin light ch 69.7 6.3 0.00022 40.3 6.3 100 47-159 83-198 (283)
167 2els_A Zinc finger protein 406 69.6 2.4 8.1E-05 30.9 2.2 25 329-354 9-33 (36)
168 2elx_A Zinc finger protein 406 69.5 2.6 8.8E-05 30.2 2.4 26 329-355 7-32 (35)
169 3dra_A Protein farnesyltransfe 69.4 12 0.00042 41.8 9.0 103 50-159 33-139 (306)
170 3u64_A Protein TP_0956; tetrat 68.2 11 0.00037 42.6 8.1 87 65-159 179-269 (301)
171 2ct1_A Transcriptional repress 67.7 3 0.0001 36.0 2.8 26 330-355 16-41 (77)
172 4gcn_A Protein STI-1; structur 67.2 5.1 0.00017 37.9 4.6 65 82-159 7-71 (127)
173 1rim_A E6APC2 peptide; E6-bind 67.0 2.8 9.4E-05 30.4 2.1 26 330-356 3-28 (33)
174 2elt_A Zinc finger protein 406 66.9 3 0.0001 30.2 2.3 26 329-355 9-34 (36)
175 3iuf_A Zinc finger protein UBI 66.8 2.9 9.9E-05 33.2 2.3 30 330-359 8-37 (48)
176 3uk3_C Zinc finger protein 217 66.7 2.9 9.8E-05 33.6 2.4 24 330-353 33-56 (57)
177 2drp_A Protein (tramtrack DNA- 66.2 3 0.0001 34.7 2.5 25 329-353 40-64 (66)
178 2c2l_A CHIP, carboxy terminus 66.0 5.4 0.00018 43.1 5.1 47 51-97 40-86 (281)
179 2emy_A Zinc finger protein 268 65.6 3.4 0.00012 31.9 2.5 27 329-356 12-38 (46)
180 3ma5_A Tetratricopeptide repea 65.3 4 0.00014 36.8 3.3 65 52-124 10-74 (100)
181 2eps_A POZ-, at HOOK-, and zin 65.3 3.4 0.00012 33.4 2.6 29 328-356 11-39 (54)
182 2epx_A Zinc finger protein 28 65.2 3.2 0.00011 32.0 2.3 28 329-356 12-39 (47)
183 2elq_A Zinc finger protein 406 65.2 3.4 0.00012 30.0 2.3 25 329-354 9-33 (36)
184 2elo_A Zinc finger protein 406 65.2 2.8 9.6E-05 30.6 1.9 26 329-355 9-34 (37)
185 2yte_A Zinc finger protein 473 64.8 3.6 0.00012 30.9 2.4 26 330-356 11-36 (42)
186 3sf4_A G-protein-signaling mod 64.8 16 0.00053 39.8 8.5 97 50-159 10-116 (406)
187 2em3_A Zinc finger protein 28 64.7 3.7 0.00013 31.7 2.5 28 328-356 11-38 (46)
188 3ro3_A PINS homolog, G-protein 64.6 7 0.00024 36.0 4.9 101 47-160 7-119 (164)
189 3dss_A Geranylgeranyl transfer 64.6 17 0.00059 41.3 9.0 108 48-159 28-139 (331)
190 2emx_A Zinc finger protein 268 64.4 3.7 0.00013 31.3 2.5 27 329-356 10-36 (44)
191 2ep1_A Zinc finger protein 484 64.4 3.4 0.00012 31.8 2.3 27 329-356 12-38 (46)
192 2ond_A Cleavage stimulation fa 64.4 12 0.0004 40.6 7.4 87 61-160 69-164 (308)
193 3qou_A Protein YBBN; thioredox 64.2 6.8 0.00023 42.4 5.4 102 52-159 154-284 (287)
194 2ooe_A Cleavage stimulation fa 63.9 5.4 0.00018 46.8 4.9 107 53-166 325-460 (530)
195 2eof_A Zinc finger protein 268 63.9 4 0.00014 31.0 2.6 27 329-356 12-38 (44)
196 2drp_A Protein (tramtrack DNA- 63.8 4 0.00014 33.9 2.8 26 329-354 10-35 (66)
197 3q49_B STIP1 homology and U bo 63.8 9.2 0.00032 35.1 5.6 65 51-123 45-109 (137)
198 2yt9_A Zinc finger-containing 63.6 3.4 0.00012 36.7 2.5 27 330-356 66-92 (95)
199 2emi_A Zinc finger protein 484 63.6 4.1 0.00014 31.4 2.6 26 330-356 13-38 (46)
200 3nf1_A KLC 1, kinesin light ch 63.5 15 0.0005 38.3 7.7 103 47-159 151-307 (311)
201 2eop_A Zinc finger protein 268 63.4 3.5 0.00012 31.7 2.2 27 329-356 12-38 (46)
202 2ept_A Zinc finger protein 32; 63.3 3.6 0.00012 30.9 2.2 25 330-355 11-35 (41)
203 2ct1_A Transcriptional repress 63.0 3.8 0.00013 35.3 2.6 28 330-357 46-73 (77)
204 2yto_A Zinc finger protein 484 62.8 4.2 0.00014 31.5 2.5 27 329-356 12-38 (46)
205 2ema_A Zinc finger protein 347 62.7 4.2 0.00014 31.3 2.5 27 329-356 12-38 (46)
206 1x5w_A Zinc finger protein 64, 62.5 4.6 0.00016 34.1 3.0 28 330-357 38-65 (70)
207 2kc7_A BFR218_protein; tetratr 62.4 9.4 0.00032 33.4 5.1 48 111-164 20-68 (99)
208 2e72_A POGO transposable eleme 62.3 3.7 0.00013 34.2 2.1 23 330-352 13-35 (49)
209 2elp_A Zinc finger protein 406 62.2 3.7 0.00013 30.0 2.0 25 329-354 9-34 (37)
210 3ly7_A Transcriptional activat 61.9 39 0.0013 39.2 11.4 103 52-160 199-307 (372)
211 2epc_A Zinc finger protein 32; 61.9 4.1 0.00014 30.6 2.3 26 329-355 11-36 (42)
212 2ene_A Zinc finger protein 347 61.8 4.1 0.00014 31.4 2.3 27 329-356 12-38 (46)
213 2eoo_A ZFP-95, zinc finger pro 61.7 4.2 0.00014 31.4 2.4 26 330-356 13-38 (46)
214 2em5_A ZFP-95, zinc finger pro 61.7 4.1 0.00014 31.5 2.3 26 330-356 13-38 (46)
215 2ely_A Zinc finger protein 224 61.5 3.7 0.00013 31.7 2.0 27 329-356 12-38 (46)
216 2ytq_A Zinc finger protein 268 61.2 4.2 0.00014 31.4 2.3 26 330-356 13-38 (46)
217 2epw_A Zinc finger protein 268 61.2 4.2 0.00014 31.3 2.3 28 328-356 11-38 (46)
218 2el5_A Zinc finger protein 268 61.1 4.2 0.00014 30.6 2.2 27 329-356 10-36 (42)
219 1qqe_A Vesicular transport pro 61.0 8 0.00027 41.7 5.2 97 52-160 80-188 (292)
220 2emg_A Zinc finger protein 484 60.9 3.7 0.00013 31.6 1.9 27 329-356 12-38 (46)
221 2l6j_A TPR repeat-containing p 60.8 9.6 0.00033 33.5 4.9 48 111-164 24-71 (111)
222 2em9_A Zinc finger protein 224 60.8 4.9 0.00017 30.9 2.6 27 328-355 11-37 (46)
223 2elv_A Zinc finger protein 406 60.5 4.2 0.00014 29.5 2.1 25 329-354 9-33 (36)
224 2emj_A Zinc finger protein 28 60.2 4.5 0.00015 31.3 2.3 27 329-356 12-38 (46)
225 2emm_A ZFP-95, zinc finger pro 60.0 5 0.00017 30.8 2.5 27 329-356 12-38 (46)
226 2ytb_A Zinc finger protein 32; 60.0 3.6 0.00012 30.9 1.6 26 329-355 11-36 (42)
227 2lvr_A Zinc finger and BTB dom 64.3 1.9 6.4E-05 29.6 0.0 22 330-351 4-25 (30)
228 2eoz_A Zinc finger protein 473 59.8 4.1 0.00014 31.5 2.0 27 329-356 12-38 (46)
229 2en6_A Zinc finger protein 268 59.7 4.6 0.00016 31.1 2.3 27 329-356 12-38 (46)
230 2yts_A Zinc finger protein 484 59.7 4.5 0.00015 31.1 2.2 27 329-356 12-38 (46)
231 2eq2_A Zinc finger protein 347 59.7 4.6 0.00016 31.1 2.2 26 330-356 13-38 (46)
232 2enf_A Zinc finger protein 347 59.6 4.1 0.00014 31.4 2.0 27 329-356 12-38 (46)
233 2em7_A Zinc finger protein 224 59.5 5.4 0.00019 30.7 2.7 26 329-355 12-37 (46)
234 1hxi_A PEX5, peroxisome target 59.5 13 0.00045 34.7 5.9 65 53-125 55-119 (121)
235 2en2_A B-cell lymphoma 6 prote 59.5 4.4 0.00015 30.5 2.1 27 329-356 11-37 (42)
236 2ysp_A Zinc finger protein 224 59.2 4.4 0.00015 31.2 2.0 26 329-355 12-37 (46)
237 2en9_A Zinc finger protein 28 59.1 4.6 0.00016 31.2 2.1 25 330-355 13-37 (46)
238 2eq0_A Zinc finger protein 347 58.9 4.9 0.00017 31.0 2.3 27 329-356 12-38 (46)
239 2em0_A Zinc finger protein 224 58.9 5.1 0.00018 30.8 2.4 27 329-356 12-38 (46)
240 2emf_A Zinc finger protein 484 58.8 4.8 0.00016 31.1 2.2 26 329-355 12-37 (46)
241 2eor_A Zinc finger protein 224 58.8 4.8 0.00016 30.9 2.2 27 329-356 12-38 (46)
242 1njq_A Superman protein; zinc- 58.7 5 0.00017 29.8 2.2 25 330-355 7-31 (39)
243 2ytf_A Zinc finger protein 268 58.7 4.9 0.00017 30.9 2.3 27 329-356 12-38 (46)
244 2eme_A Zinc finger protein 473 58.7 5.9 0.0002 30.4 2.7 27 329-356 12-38 (46)
245 2eow_A Zinc finger protein 347 58.6 4.9 0.00017 30.9 2.2 27 329-356 12-38 (46)
246 2ytt_A Zinc finger protein 473 58.5 3.7 0.00013 31.7 1.5 25 330-355 13-37 (46)
247 2yrj_A Zinc finger protein 473 58.4 4.6 0.00016 31.0 2.1 26 329-355 12-37 (46)
248 2ep3_A Zinc finger protein 484 58.4 4.6 0.00016 31.1 2.1 27 329-356 12-38 (46)
249 2eou_A Zinc finger protein 473 58.3 4.6 0.00016 30.9 2.0 26 329-355 12-37 (44)
250 2lvt_A Zinc finger and BTB dom 62.8 2.1 7.2E-05 29.4 0.0 24 330-354 3-26 (29)
251 2el6_A Zinc finger protein 268 58.0 5.9 0.0002 30.5 2.6 25 330-355 13-37 (46)
252 2ep2_A Zinc finger protein 484 58.0 5.1 0.00018 30.8 2.3 27 329-356 12-38 (46)
253 2eml_A Zinc finger protein 28 58.0 5 0.00017 30.9 2.2 27 329-356 12-38 (46)
254 2lv2_A Insulinoma-associated p 57.9 4.9 0.00017 36.8 2.4 28 329-356 56-83 (85)
255 2epv_A Zinc finger protein 268 57.8 7 0.00024 29.9 3.0 27 329-356 12-38 (44)
256 2eov_A Zinc finger protein 484 57.7 5.1 0.00017 30.8 2.2 26 330-356 13-38 (46)
257 2ytj_A Zinc finger protein 484 57.7 5.2 0.00018 30.8 2.3 27 329-356 12-38 (46)
258 2ytp_A Zinc finger protein 484 57.7 4.8 0.00016 31.1 2.1 27 329-356 12-38 (46)
259 2adr_A ADR1; transcription reg 57.6 5.4 0.00018 32.4 2.5 25 330-355 3-27 (60)
260 2yti_A Zinc finger protein 347 57.4 4.1 0.00014 31.4 1.6 27 329-356 12-38 (46)
261 2eon_A ZFP-95, zinc finger pro 57.4 4.5 0.00015 31.3 1.8 27 329-356 12-38 (46)
262 2yth_A Zinc finger protein 224 57.3 5 0.00017 31.0 2.1 27 329-356 12-38 (46)
263 2emh_A Zinc finger protein 484 57.2 5.3 0.00018 30.8 2.2 27 329-356 12-38 (46)
264 1bbo_A Human enhancer-binding 57.2 5.3 0.00018 32.0 2.3 25 329-353 29-53 (57)
265 2yrm_A B-cell lymphoma 6 prote 57.2 5.3 0.00018 30.5 2.2 25 330-355 11-35 (43)
266 2yu5_A Zinc finger protein 473 57.2 5 0.00017 30.6 2.0 25 330-355 13-37 (44)
267 2em2_A Zinc finger protein 28 57.1 5.4 0.00019 30.8 2.3 26 330-356 13-38 (46)
268 2eos_A B-cell lymphoma 6 prote 57.0 4.6 0.00016 30.5 1.8 25 330-355 12-36 (42)
269 2en7_A Zinc finger protein 268 56.7 4.6 0.00016 30.6 1.8 27 329-356 12-38 (44)
270 2eoq_A Zinc finger protein 224 56.7 5.8 0.0002 30.5 2.4 27 329-356 12-38 (46)
271 2eoj_A Zinc finger protein 268 56.5 4.4 0.00015 30.8 1.6 26 329-355 12-37 (44)
272 2em6_A Zinc finger protein 224 56.3 5.2 0.00018 30.9 2.1 27 329-356 12-38 (46)
273 2dlq_A GLI-kruppel family memb 56.3 5.4 0.00019 37.0 2.5 27 330-356 95-121 (124)
274 2eom_A ZFP-95, zinc finger pro 56.2 5.3 0.00018 30.9 2.1 26 330-356 13-38 (46)
275 3ro3_A PINS homolog, G-protein 55.9 18 0.00062 33.1 6.1 99 49-160 49-159 (164)
276 2emk_A Zinc finger protein 28 55.9 5.8 0.0002 30.6 2.3 26 330-356 13-38 (46)
277 1x5w_A Zinc finger protein 64, 55.8 6.3 0.00021 33.3 2.6 28 328-356 8-35 (70)
278 1bbo_A Human enhancer-binding 55.7 6.1 0.00021 31.7 2.4 25 330-355 2-26 (57)
279 2enh_A Zinc finger protein 28 55.6 5 0.00017 31.0 1.8 26 329-355 12-37 (46)
280 2en3_A ZFP-95, zinc finger pro 55.6 5.4 0.00019 30.7 2.0 26 330-356 13-38 (46)
281 2epu_A Zinc finger protein 32; 55.6 5 0.00017 30.8 1.8 26 329-355 12-37 (45)
282 3uk3_C Zinc finger protein 217 55.5 5.6 0.00019 31.9 2.2 25 330-355 5-29 (57)
283 2ytk_A Zinc finger protein 347 55.5 6 0.00021 30.4 2.3 27 329-356 12-38 (46)
284 2eq1_A Zinc finger protein 347 55.4 5 0.00017 30.9 1.8 26 330-356 13-38 (46)
285 2ytn_A Zinc finger protein 347 55.4 5.5 0.00019 30.6 2.1 27 329-356 12-38 (46)
286 2emb_A Zinc finger protein 473 55.3 5.9 0.0002 30.2 2.2 26 329-355 12-37 (44)
287 2emz_A ZFP-95, zinc finger pro 55.2 5.6 0.00019 30.7 2.1 26 330-356 13-38 (46)
288 3ulq_A Response regulator aspa 55.2 9.4 0.00032 42.3 4.7 98 55-160 109-214 (383)
289 2em4_A Zinc finger protein 28 55.2 6.1 0.00021 30.5 2.3 26 330-356 13-38 (46)
290 2kat_A Uncharacterized protein 55.1 19 0.00065 32.5 6.0 66 52-125 22-87 (115)
291 2emp_A Zinc finger protein 347 54.9 6.3 0.00022 30.3 2.3 27 329-356 12-38 (46)
292 2epz_A Zinc finger protein 28 54.9 5.4 0.00019 30.7 1.9 25 330-355 13-37 (46)
293 2eq3_A Zinc finger protein 347 54.8 4.8 0.00016 30.9 1.6 26 329-355 12-37 (46)
294 2em8_A Zinc finger protein 224 54.6 6.3 0.00022 30.4 2.3 25 330-355 13-37 (46)
295 1fv5_A First zinc finger of U- 54.6 5.3 0.00018 30.9 1.8 20 330-349 9-28 (36)
296 2eq4_A Zinc finger protein 224 54.5 6 0.00021 30.3 2.1 26 330-356 13-38 (46)
297 2eox_A Zinc finger protein 473 54.5 4.4 0.00015 30.9 1.3 26 329-355 12-37 (44)
298 2ep0_A Zinc finger protein 28 54.4 5.9 0.0002 30.5 2.1 27 329-356 12-38 (46)
299 2ytm_A Zinc finger protein 28 54.3 5.6 0.00019 30.8 1.9 27 329-356 12-38 (46)
300 3edt_B KLC 2, kinesin light ch 54.2 31 0.0011 35.0 8.2 51 47-97 125-183 (283)
301 2ytd_A Zinc finger protein 473 54.0 6.5 0.00022 30.2 2.3 28 328-356 11-38 (46)
302 2enc_A Zinc finger protein 224 53.9 6.6 0.00023 30.2 2.3 27 329-356 12-38 (46)
303 1zfd_A SWI5; DNA binding motif 53.8 7.2 0.00024 27.3 2.3 24 330-354 4-29 (32)
304 2elz_A Zinc finger protein 224 53.6 6.3 0.00022 30.4 2.1 25 330-355 13-37 (46)
305 2en1_A Zinc finger protein 224 53.6 5.9 0.0002 30.5 1.9 27 329-356 12-38 (46)
306 1dce_A Protein (RAB geranylger 53.6 21 0.00071 43.3 7.6 96 64-167 124-228 (567)
307 3u3w_A Transcriptional activat 53.5 16 0.00056 39.0 6.1 29 132-160 236-267 (293)
308 2en8_A Zinc finger protein 224 53.5 6.1 0.00021 30.3 2.0 27 329-356 12-38 (46)
309 2ytr_A Zinc finger protein 347 53.5 5.1 0.00018 30.7 1.6 26 330-356 13-38 (46)
310 2eoh_A Zinc finger protein 28 53.2 6.4 0.00022 30.4 2.1 25 330-355 13-37 (46)
311 1yui_A GAGA-factor; complex (D 53.1 6.6 0.00022 31.6 2.2 27 328-355 23-49 (54)
312 2yso_A ZFP-95, zinc finger pro 52.9 6.8 0.00023 30.1 2.2 25 330-355 13-37 (46)
313 2kck_A TPR repeat; tetratricop 52.9 11 0.00039 32.5 4.0 67 80-159 3-69 (112)
314 2qfc_A PLCR protein; TPR, HTH, 52.8 86 0.0029 33.3 11.7 101 53-159 79-184 (293)
315 2el4_A Zinc finger protein 268 52.7 6.9 0.00023 30.0 2.2 28 328-356 11-38 (46)
316 1zu2_A Mitochondrial import re 52.7 15 0.00051 37.7 5.3 54 111-165 22-80 (158)
317 2eoy_A Zinc finger protein 473 52.6 6 0.0002 30.5 1.8 26 329-355 12-37 (46)
318 2eoe_A Zinc finger protein 347 52.6 5.6 0.00019 30.5 1.7 28 328-356 11-38 (46)
319 2ytg_A ZFP-95, zinc finger pro 51.8 5.5 0.00019 30.7 1.5 27 329-356 12-38 (46)
320 1sp2_A SP1F2; zinc finger, tra 51.6 7.1 0.00024 27.2 1.9 24 330-354 3-28 (31)
321 2yu8_A Zinc finger protein 347 51.3 6.6 0.00023 30.2 1.9 27 329-356 12-38 (46)
322 2ab3_A ZNF29; zinc finger prot 51.1 7.5 0.00026 26.2 2.0 22 330-351 3-26 (29)
323 2epr_A POZ-, at HOOK-, and zin 51.0 6.7 0.00023 30.7 1.9 27 328-355 11-37 (48)
324 4gzn_C ZFP-57, zinc finger pro 50.7 8.3 0.00029 32.9 2.6 27 328-355 31-57 (60)
325 3dss_A Geranylgeranyl transfer 50.2 24 0.00082 40.2 7.0 134 64-210 125-267 (331)
326 3n71_A Histone lysine methyltr 49.9 32 0.0011 41.1 8.3 105 49-160 309-423 (490)
327 3q7a_A Farnesyltransferase alp 49.4 50 0.0017 37.9 9.5 87 62-159 67-154 (349)
328 1zw8_A Zinc-responsive transcr 49.4 7.5 0.00026 33.7 2.1 24 334-357 8-31 (64)
329 1qqe_A Vesicular transport pro 49.1 51 0.0017 35.3 9.2 102 54-159 163-269 (292)
330 1x6h_A Transcriptional repress 48.7 11 0.00036 32.7 3.0 26 330-355 16-41 (86)
331 3sf4_A G-protein-signaling mod 48.7 22 0.00077 38.5 6.3 98 50-160 228-337 (406)
332 2epq_A POZ-, at HOOK-, and zin 48.6 7.4 0.00025 29.8 1.8 27 329-356 10-36 (45)
333 4f3v_A ESX-1 secretion system 48.2 20 0.0007 39.9 5.9 102 47-166 102-205 (282)
334 1elr_A TPR2A-domain of HOP; HO 47.9 34 0.0012 30.2 6.4 78 51-137 40-124 (131)
335 3ro2_A PINS homolog, G-protein 47.5 26 0.00089 36.4 6.3 97 51-160 225-333 (338)
336 2dmi_A Teashirt homolog 3; zin 46.3 12 0.00041 34.5 3.1 29 329-357 80-108 (115)
337 3gw4_A Uncharacterized protein 46.2 39 0.0013 32.9 7.1 98 49-159 26-136 (203)
338 2yhe_A SEC-alkyl sulfatase; hy 51.6 4.4 0.00015 50.5 0.0 72 41-120 457-528 (668)
339 2epp_A POZ-, at HOOK-, and zin 45.0 15 0.0005 32.2 3.3 26 330-356 14-39 (66)
340 1x6e_A Zinc finger protein 24; 44.7 11 0.00037 32.0 2.4 26 329-355 42-67 (72)
341 2kfq_A FP1; protein, de novo p 43.7 2.3 7.9E-05 30.5 -1.8 25 330-355 3-27 (32)
342 3q15_A PSP28, response regulat 43.7 18 0.00062 40.0 4.7 99 54-160 106-212 (378)
343 2d9h_A Zinc finger protein 692 43.6 12 0.00039 32.2 2.4 27 328-355 6-32 (78)
344 2ej4_A Zinc finger protein ZIC 43.6 11 0.00038 33.4 2.4 25 332-356 28-52 (95)
345 2lce_A B-cell lymphoma 6 prote 43.3 11 0.00038 32.0 2.3 27 329-356 45-71 (74)
346 1x6e_A Zinc finger protein 24; 43.0 13 0.00045 31.4 2.7 27 328-355 13-39 (72)
347 1f2i_G Fusion of N-terminal 17 42.5 11 0.00037 31.8 2.1 21 330-350 50-70 (73)
348 2gqj_A Zinc finger protein KIA 42.4 9.9 0.00034 34.6 1.9 26 330-355 55-80 (98)
349 2ifu_A Gamma-SNAP; membrane fu 42.1 40 0.0014 36.4 7.0 95 61-159 88-184 (307)
350 2eln_A Zinc finger protein 406 41.7 14 0.00048 28.6 2.3 24 330-354 10-35 (38)
351 3gw4_A Uncharacterized protein 41.7 68 0.0023 31.1 8.0 105 47-160 64-177 (203)
352 4gzn_C ZFP-57, zinc finger pro 41.7 13 0.00044 31.7 2.3 26 330-356 5-30 (60)
353 1llm_C Chimera of ZIF23-GCN4; 41.7 12 0.00043 32.9 2.4 25 330-355 4-28 (88)
354 2kmk_A Zinc finger protein GFI 41.3 13 0.00043 31.8 2.3 23 329-351 57-79 (82)
355 1llm_C Chimera of ZIF23-GCN4; 41.3 13 0.00044 32.8 2.4 25 330-354 32-56 (88)
356 4f3v_A ESX-1 secretion system 40.9 46 0.0016 37.1 7.3 98 47-158 5-130 (282)
357 1nzn_A CGI-135 protein, fissio 40.7 32 0.0011 34.1 5.3 52 47-98 70-123 (126)
358 2kmk_A Zinc finger protein GFI 40.7 14 0.00047 31.6 2.4 24 330-354 2-25 (82)
359 2dmd_A Zinc finger protein 64, 40.3 14 0.00049 32.6 2.6 29 328-357 63-91 (96)
360 2lce_A B-cell lymphoma 6 prote 40.1 14 0.00046 31.5 2.3 27 328-355 16-42 (74)
361 1va1_A Transcription factor SP 40.1 15 0.00053 26.8 2.3 26 329-355 8-35 (37)
362 2lv2_A Insulinoma-associated p 39.8 13 0.00043 34.0 2.1 26 329-355 28-53 (85)
363 2csh_A Zinc finger protein 297 39.7 14 0.00048 33.7 2.5 28 328-355 64-91 (110)
364 1ouv_A Conserved hypothetical 39.6 69 0.0023 33.2 8.1 101 51-160 8-108 (273)
365 1x6h_A Transcriptional repress 39.4 16 0.00056 31.4 2.8 27 329-355 47-73 (86)
366 1wjp_A Zinc finger protein 295 39.2 12 0.0004 34.3 1.8 27 330-356 70-96 (107)
367 2cfu_A SDSA1; SDS-hydrolase, l 39.1 31 0.0011 42.7 6.2 69 42-115 446-514 (658)
368 4a1s_A PINS, partner of inscut 38.8 26 0.0009 38.5 5.0 100 50-159 224-332 (411)
369 2ooe_A Cleavage stimulation fa 38.8 60 0.002 37.8 8.3 70 60-138 23-92 (530)
370 1na3_A Designed protein CTPR2; 38.5 44 0.0015 28.0 5.3 45 52-96 46-90 (91)
371 3dra_A Protein farnesyltransfe 38.2 49 0.0017 37.0 7.1 87 65-163 202-291 (306)
372 3q15_A PSP28, response regulat 37.4 1E+02 0.0034 34.0 9.4 102 48-162 181-293 (378)
373 1a1h_A QGSR zinc finger peptid 37.0 17 0.0006 31.6 2.6 26 329-355 62-87 (90)
374 1bhi_A CRE-BP1, ATF-2; CRE bin 36.9 18 0.00061 26.3 2.2 25 330-355 7-33 (38)
375 2yt9_A Zinc finger-containing 36.9 17 0.00057 32.1 2.4 26 328-353 34-59 (95)
376 2cot_A Zinc finger protein 435 36.8 16 0.00056 31.2 2.3 28 328-356 45-72 (77)
377 2djr_A Zinc finger BED domain- 36.6 11 0.00038 34.3 1.2 33 329-361 28-67 (76)
378 2qfc_A PLCR protein; TPR, HTH, 36.4 86 0.003 33.3 8.5 92 59-160 125-226 (293)
379 2wbs_A Krueppel-like factor 4; 35.9 16 0.00056 31.7 2.2 22 329-350 65-86 (89)
380 2ctd_A Zinc finger protein 512 35.9 18 0.00061 33.2 2.5 26 330-355 63-88 (96)
381 2dmd_A Zinc finger protein 64, 35.7 16 0.00054 32.3 2.1 23 329-351 8-30 (96)
382 2gqj_A Zinc finger protein KIA 35.5 15 0.00053 33.3 2.0 26 328-353 23-49 (98)
383 2ebt_A Krueppel-like factor 5; 35.3 17 0.00058 32.3 2.2 22 329-350 75-96 (100)
384 2jvx_A NF-kappa-B essential mo 35.1 22 0.00075 26.6 2.3 22 330-351 4-25 (28)
385 3e4b_A ALGK; tetratricopeptide 34.8 32 0.0011 39.9 5.0 100 53-162 7-106 (452)
386 2ej4_A Zinc finger protein ZIC 34.0 16 0.00053 32.4 1.7 26 330-356 63-88 (95)
387 1wir_A Protein arginine N-meth 34.0 17 0.00058 35.9 2.1 28 330-357 16-43 (121)
388 2ee8_A Protein ODD-skipped-rel 33.5 21 0.00073 32.2 2.6 29 328-357 72-100 (106)
389 1a1h_A QGSR zinc finger peptid 33.1 21 0.00072 31.0 2.4 26 329-355 34-59 (90)
390 3i2d_A E3 SUMO-protein ligase 32.5 6.4 0.00022 45.6 -1.4 48 327-388 286-337 (371)
391 2wbt_A B-129; zinc finger; 2.7 32.3 23 0.00078 33.3 2.7 24 330-353 101-124 (129)
392 3mv2_B Coatomer subunit epsilo 32.0 62 0.0021 36.6 6.5 99 49-159 136-240 (310)
393 2cot_A Zinc finger protein 435 31.7 20 0.00068 30.7 2.0 27 328-355 17-43 (77)
394 1hz4_A MALT regulatory protein 31.7 1.1E+02 0.0039 33.1 8.6 98 50-160 94-204 (373)
395 2dlq_A GLI-kruppel family memb 31.1 23 0.00077 32.7 2.4 27 328-355 65-91 (124)
396 2rpc_A Zinc finger protein ZIC 31.1 22 0.00076 34.4 2.4 28 330-357 26-53 (155)
397 3u3w_A Transcriptional activat 30.6 93 0.0032 33.0 7.5 31 52-82 78-108 (293)
398 2gli_A Protein (five-finger GL 30.5 24 0.00081 34.1 2.5 25 332-356 6-30 (155)
399 2lt7_A Transcriptional regulat 30.4 22 0.00076 34.7 2.3 27 329-355 78-104 (133)
400 2ee8_A Protein ODD-skipped-rel 29.3 25 0.00085 31.7 2.3 27 328-355 16-42 (106)
401 3bee_A Putative YFRE protein; 29.3 1.6E+02 0.0053 26.7 7.7 75 44-128 3-80 (93)
402 2dlk_A Novel protein; ZF-C2H2 29.2 31 0.0011 29.2 2.8 27 330-356 8-36 (79)
403 2csh_A Zinc finger protein 297 28.8 22 0.00075 32.4 1.8 26 329-355 37-62 (110)
404 2ctd_A Zinc finger protein 512 28.7 26 0.00087 32.2 2.3 24 329-353 34-58 (96)
405 1hz4_A MALT regulatory protein 28.4 87 0.003 34.0 6.9 97 53-162 57-167 (373)
406 3ulq_A Response regulator aspa 28.3 1.1E+02 0.0036 33.7 7.6 98 50-160 185-294 (383)
407 4ekf_A Adenain; alpha and beta 28.1 44 0.0015 35.3 4.1 29 1234-1262 40-71 (204)
408 2czr_A TBP-interacting protein 28.0 22 0.00076 37.2 1.8 32 326-359 151-182 (226)
409 2dmi_A Teashirt homolog 3; zin 27.5 27 0.00094 32.0 2.3 24 328-351 18-41 (115)
410 2ifu_A Gamma-SNAP; membrane fu 27.2 77 0.0026 34.1 6.2 101 53-164 120-227 (307)
411 3sp4_A Aprataxin-like protein; 27.1 19 0.00065 38.5 1.2 32 330-361 170-202 (204)
412 1wjp_A Zinc finger protein 295 26.8 29 0.001 31.5 2.3 26 329-356 42-67 (107)
413 2jp9_A Wilms tumor 1; DNA bind 26.6 30 0.001 31.6 2.4 26 329-355 66-91 (119)
414 2ghf_A ZHX1, zinc fingers and 26.5 31 0.0011 32.5 2.4 28 328-355 17-44 (102)
415 3qwp_A SET and MYND domain-con 26.5 1.7E+02 0.0057 34.1 9.2 97 56-160 294-401 (429)
416 1ncs_A Peptide M30F, transcrip 24.7 23 0.0008 27.5 1.1 25 330-355 19-45 (47)
417 2epa_A Krueppel-like factor 10 24.5 36 0.0012 28.5 2.3 27 328-355 16-44 (72)
418 2ent_A Krueppel-like factor 15 23.6 37 0.0013 25.9 2.0 25 330-355 13-39 (48)
419 2ghf_A ZHX1, zinc fingers and 23.5 32 0.0011 32.3 1.9 28 329-356 50-77 (102)
420 1x6f_A Zinc finger protein 462 23.5 37 0.0013 30.9 2.3 26 329-355 25-50 (88)
421 1f2i_G Fusion of N-terminal 17 23.2 40 0.0014 28.2 2.3 27 328-355 18-46 (73)
422 3o48_A Mitochondria fission 1 23.0 88 0.003 31.4 5.0 50 49-98 76-127 (134)
423 1ubd_C Protein (YY1 zinc finge 22.8 38 0.0013 31.3 2.3 26 329-355 34-59 (124)
424 3ga8_A HTH-type transcriptiona 22.8 36 0.0012 30.5 2.0 20 328-347 35-54 (78)
425 2j7j_A Transcription factor II 22.7 39 0.0013 28.7 2.2 23 330-352 59-84 (85)
426 1y8m_A FIS1; mitochondria, unk 21.7 1.1E+02 0.0037 31.1 5.4 49 50-98 76-126 (144)
427 3k1s_A PTS system, cellobiose- 21.6 3.1E+02 0.01 26.5 8.3 84 50-150 23-106 (109)
428 3q7a_A Farnesyltransferase alp 21.5 1.5E+02 0.0051 34.0 7.3 94 64-164 104-200 (349)
429 2eod_A TNF receptor-associated 21.5 39 0.0013 28.0 1.9 23 328-351 9-31 (66)
430 2j7j_A Transcription factor II 21.1 47 0.0016 28.2 2.4 25 330-355 32-58 (85)
431 3qww_A SET and MYND domain-con 21.1 1.7E+02 0.0057 34.3 7.8 98 56-160 305-412 (433)
432 2wbt_A B-129; zinc finger; 2.7 21.0 42 0.0014 31.5 2.2 24 329-353 74-97 (129)
433 2lt7_A Transcriptional regulat 20.4 46 0.0016 32.4 2.4 27 328-355 21-47 (133)
434 3mv2_B Coatomer subunit epsilo 20.1 1E+02 0.0034 34.9 5.4 90 54-159 74-165 (310)
435 3pwf_A Rubrerythrin; non heme 20.0 82 0.0028 32.5 4.3 30 311-340 117-149 (170)
No 1
>2y6e_A Ubiquitin carboxyl-terminal hydrolase 4; HET: CME; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.8e-46 Score=425.63 Aligned_cols=292 Identities=15% Similarity=0.203 Sum_probs=219.6
Q ss_pred hhccCCCCCCcchHHHHHHHhhCcHHHHHHHhccCccccCCCC-----CCcHHHHHHHHHHHHhcccCCCCccccccchH
Q 037237 943 YWRQFENGTTDSFVNMIVKSLWHLREFREEFMRRRQTIHNHIG-----DPCIVCALYDMFAALSTACEDNQVEVPSAPSS 1017 (1267)
Q Consensus 943 ~gL~N~~GgNTCFLNSILQcL~H~p~fRe~fLs~~~~~h~~~~-----~~CV~CAL~~LFsal~~ss~~~~~e~~vsPs~ 1017 (1267)
.||.|. |||||||||||||+|+|+||++|+...+..+.... ..++.++|+.+|..++.+. .. ++.|..
T Consensus 9 ~GL~Nl--GNTCYmNSvLQ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L~~~l~~~~----~~-~i~P~~ 81 (367)
T 2y6e_A 9 CGLGNL--GNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGR----DA-HVAPRM 81 (367)
T ss_dssp CEECCC--SSCHHHHHHHHHHHTCHHHHHHHHTTCGGGGCCSSCTTSCTTHHHHHHHHHHHHHTSSS----CS-EECCHH
T ss_pred cCCccC--CcchHHHHHHHHHHCCHHHHHHHHcCchhhhccccCCCCcchHHHHHHHHHHHHHHcCC----CC-CcCHHH
Confidence 799997 99999999999999999999999986433222221 2389999999999998543 22 799999
Q ss_pred HHHHHHhcccchHHHhhhhccchHHHHHHHHHHHhhhccCCC--CCcCCcccc--------cCCCCCC--CCCchheeee
Q 037237 1018 LRVALTTYSYDKNICKQAKMNDSSELLQAILESLHESFDTVN--CDFQSQDEY--------EGSLDCS--SAGCFVHIIF 1085 (1267)
Q Consensus 1018 Lr~aLs~i~~ds~~F~~g~QqDAhEfL~~LLd~LH~s~~~~~--~~~es~e~~--------~~s~~~~--~~~CIIHqLF 1085 (1267)
|+.++....+ .|..+.||||||||.+||+.||..+.... +..+..+.. ...|... ...++|+++|
T Consensus 82 ~~~~l~~~~~---~f~~~~QqDA~Efl~~LLd~L~~~l~~~~~~~~~~~~~~~g~~~~~~a~~~w~~~~~~~~s~i~~~F 158 (367)
T 2y6e_A 82 FKTQVGRFAP---QFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTF 158 (367)
T ss_dssp HHHHHHHHCG---GGCSSSCCCHHHHHHHHHHHHHHHTCSCSSCCCCCCCCCCSCCHHHHHHHHHHHHHHHCCSHHHHHH
T ss_pred HHHHHHHhhh---hcCCCCCCCHHHHHHHHHHHHHHHHHhhccCCccccccccCCchhHHHHHHHHHHHHhcCCcccccc
Confidence 9999999877 89999999999999999999999986532 111100000 0011110 1368999999
Q ss_pred eeEeEeEEecCCCCCcccc-cccccceeeccchhcccccc--------CCCCCcHHHHHHHhc------cCCcccCCcCC
Q 037237 1086 GMDHYEKVNCVKCSAKFGY-RKYTSLFLTLNAYNLRNMKK--------TPRGSSFDVLLKQLV------LNGLLNCGACG 1150 (1267)
Q Consensus 1086 Gg~LrSqV~C~~Cg~~S~t-~pf~~l~l~I~as~l~~~k~--------~~~~~SF~~lLk~~~------~~~~~~C~~Cg 1150 (1267)
+|.++++++|..||++|.+ +||.++.++|+....+.... .....+++++|+.+. .++.|.|++|+
T Consensus 159 ~G~l~s~~~C~~C~~~s~~~e~f~~LsL~ip~~~~~~~~~~~~~~~~~~~~~~sL~~~L~~f~~~E~l~~~~~~~C~~C~ 238 (367)
T 2y6e_A 159 HGLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEGPMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCK 238 (367)
T ss_dssp CEEEEEEEECTTTCCEEEEEEEESSEEEECCC-------------------CEEHHHHHHHHTSCEECCC-CCEEETTTT
T ss_pred CcEEeeeEEeCCCCCEeeeEccCeeEEeeCCCCcCCcceeeeeccccccCCCCCHHHHHHHhcccccCCCCCCccCCCCC
Confidence 9999999999999999987 79999999887643221100 012358999998864 34579999999
Q ss_pred Cccc--eehccccCCcEEEEEeeccccchhhhhhhcccccceeeecccCCCCcchhhhhhhhcccc-cccCCcccCCC-C
Q 037237 1151 QINY--IHHTLWRLPHVFTIGMLRVCNTIEIEVIFGYSWLEFAVIGWQRDCESSEDVLSTLSALSA-ELDISNLFEGY-P 1226 (1267)
Q Consensus 1151 k~~~--kq~tI~rlP~VLtIhLKRFeh~~~~~~~f~~~~~~~~v~~w~~~~~s~~dIs~tl~~~~~-~LDLs~ly~g~-d 1226 (1267)
+.+. ++..|.++|+||+||||||. |......+. .+.+.||. .|||+++.... .
T Consensus 239 ~~~~a~K~~~i~~lP~vL~i~LkRF~--------------------~~~~~~~K~---~~~v~fp~~~Ldl~~~~~~~~~ 295 (367)
T 2y6e_A 239 KHQQATKKFDLWSLPKILVVHLKRFS--------------------YNRYWRDKL---DTVVEFPIRGLNMSEFVCNLSA 295 (367)
T ss_dssp EEECCEEEEEEEECCSEEEEEEECEE--------------------ECSSCEEEC---CCCEECCSSCEECGGGBSCSSS
T ss_pred CCceEEEEEEEecCCcEEEEEEeCee--------------------ecCccceec---CceEEecCCcCChhhhccCCCC
Confidence 8764 67889999999999999996 211111122 23467886 69999977543 3
Q ss_pred CCCeEEEEEEEEEec--CCCcEEEEEEecCCCcEEEecCCCCC
Q 037237 1227 PDNIYFLASMVCVSS--DRQRYIIFVYNHMLEKYVQSDGATDE 1267 (1267)
Q Consensus 1227 ~~~~Y~L~aVVcH~G--~gGHYicfvr~~~~g~W~~fDDs~V~ 1267 (1267)
....|+|+|||+|.| ++|||+||+|+..+|+||.|||+.|+
T Consensus 296 ~~~~Y~L~avv~H~G~~~~GHY~a~~~~~~~~~W~~fnD~~V~ 338 (367)
T 2y6e_A 296 RPYVYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVS 338 (367)
T ss_dssp CCCEEEEEEEEEEECSSSSCEEEEEEECTTTCCEEEEETTEEE
T ss_pred CCceEEEEEEeecCCCCCCCeeeEEEEcCCCCeEEEECCCCce
Confidence 467999999999999 89999999997668999999999884
No 2
>3nhe_A Ubiquitin carboxyl-terminal hydrolase 2; cysteine protease, substrate ENZY complex, hydrolase-protein binding complex; HET: CME; 1.26A {Homo sapiens} SCOP: d.3.1.9 PDB: 2hd5_A 3v6c_A 3v6e_A 2ibi_A
Probab=100.00 E-value=3.9e-45 Score=412.05 Aligned_cols=286 Identities=14% Similarity=0.192 Sum_probs=221.3
Q ss_pred hhccCCCCCCcchHHHHHHHhhCcHHHHHHHhccCccccCC---CCCCcHHHHHHHHHHHHhcccCCCCccccccchHHH
Q 037237 943 YWRQFENGTTDSFVNMIVKSLWHLREFREEFMRRRQTIHNH---IGDPCIVCALYDMFAALSTACEDNQVEVPSAPSSLR 1019 (1267)
Q Consensus 943 ~gL~N~~GgNTCFLNSILQcL~H~p~fRe~fLs~~~~~h~~---~~~~CV~CAL~~LFsal~~ss~~~~~e~~vsPs~Lr 1019 (1267)
.||.|. |||||||||||||+|+|+||+++++..+..... ....|+.|+|..+|..+..... .. .+.|..|+
T Consensus 10 ~GL~N~--GNtCY~NsvLQ~L~~~~~~r~~~l~~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~---~~-~~~p~~~~ 83 (348)
T 3nhe_A 10 AGLRNL--GNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWTSSP---ND-VVSPSEFK 83 (348)
T ss_dssp CEECCC--SSCHHHHHHHHHHHTCHHHHHHHHTTGGGGTSCSSCCTTHHHHHHHHHHHHHHTTCCT---TC-EECCHHHH
T ss_pred CCCCcC--CccHHHHHHHHHHhcCHHHHHHHhcchhhHhhccCCCcccHHHHHHHHHHHHHHcCCC---CC-ccCHHHHH
Confidence 799996 899999999999999999999999854332222 2345999999999999984322 23 79999999
Q ss_pred HHHHhcccchHHHhhhhccchHHHHHHHHHHHhhhccCCCCCcCC-ccc---------ccCCCC--CCCCCchheeeeee
Q 037237 1020 VALTTYSYDKNICKQAKMNDSSELLQAILESLHESFDTVNCDFQS-QDE---------YEGSLD--CSSAGCFVHIIFGM 1087 (1267)
Q Consensus 1020 ~aLs~i~~ds~~F~~g~QqDAhEfL~~LLd~LH~s~~~~~~~~es-~e~---------~~~s~~--~~~~~CIIHqLFGg 1087 (1267)
.++....+ .|..+.||||||||.+||+.||..+......... ... ....|. .....|+|+++|+|
T Consensus 84 ~~l~~~~~---~f~~~~QqDa~Efl~~lLd~L~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~i~~~F~g 160 (348)
T 3nhe_A 84 TQIQRYAP---RFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVG 160 (348)
T ss_dssp HHHHHHSG---GGSSSCCBCHHHHHHHHHHHHHHHHCSCSSCCCCCCCCCTTSCHHHHHHHHHHHHHTTCCCHHHHHHCE
T ss_pred HHHHHhhh---hhCCCCccCHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCchHHHHHHHHHHHhhcCCccccccce
Confidence 99999887 8988999999999999999999998653211000 000 000111 01346899999999
Q ss_pred EeEeEEecCCCCCcccc-cccccceeeccchhccccccCCCCCcHHHHHHHhc------cCCcccCCcCCCccc--eehc
Q 037237 1088 DHYEKVNCVKCSAKFGY-RKYTSLFLTLNAYNLRNMKKTPRGSSFDVLLKQLV------LNGLLNCGACGQINY--IHHT 1158 (1267)
Q Consensus 1088 ~LrSqV~C~~Cg~~S~t-~pf~~l~l~I~as~l~~~k~~~~~~SF~~lLk~~~------~~~~~~C~~Cgk~~~--kq~t 1158 (1267)
.++++++|..||++|.+ +||.++.++|+... .+..++.++|+.+. .+++|.|++|++.+. ++..
T Consensus 161 ~~~~~~~C~~C~~~s~~~e~f~~LsL~i~~~~-------~~~~sl~~~L~~~~~~e~l~~~~~~~C~~C~~~~~~~k~~~ 233 (348)
T 3nhe_A 161 QLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRG-------YPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFS 233 (348)
T ss_dssp EEEEEEEETTTCCEEEEEEEESSEEECCCSSC-------SSCEEHHHHHHHHHSCEEECGGGCCEETTTTEECCEEEEEE
T ss_pred EEEEEEEcCCCCCEeeeeccceEEeeeCCCcc-------cCCCCHHHHHHHhcCceEecCCCceECCCCCCcccEEEEEE
Confidence 99999999999999988 78988888776421 12258999998763 345799999998765 6778
Q ss_pred cccCCcEEEEEeeccccchhhhhhhcccccceeeecccCCCCcchhhhhhhhccc-ccccCCcccCCCCCCCeEEEEEEE
Q 037237 1159 LWRLPHVFTIGMLRVCNTIEIEVIFGYSWLEFAVIGWQRDCESSEDVLSTLSALS-AELDISNLFEGYPPDNIYFLASMV 1237 (1267)
Q Consensus 1159 I~rlP~VLtIhLKRFeh~~~~~~~f~~~~~~~~v~~w~~~~~s~~dIs~tl~~~~-~~LDLs~ly~g~d~~~~Y~L~aVV 1237 (1267)
|.++|+||+||||||.. ......+. .+.+.|| ..|||+++.........|+|+|||
T Consensus 234 i~~lP~vL~i~lkRf~~--------------------~~~~~~K~---~~~v~fp~~~ldl~~~~~~~~~~~~Y~L~avv 290 (348)
T 3nhe_A 234 IQRFPKILVLHLKRFSE--------------------SRIRTSKL---TTFVNFPLRDLDLREFASENTNHAVYNLYAVS 290 (348)
T ss_dssp EEECCSEEEEEECCBCC--------------------CSSCCCBC---CCCEECCSSCEECGGGBCTTCCCCEEEEEEEE
T ss_pred eecCCceEEEEEEcccc--------------------cCCceeec---CcceeccCCcCCHhhhcCCCCCCCcEEEEEEE
Confidence 99999999999999972 22111122 2335788 469999988665667899999999
Q ss_pred EEec--CCCcEEEEEEecCCCcEEEecCCCCC
Q 037237 1238 CVSS--DRQRYIIFVYNHMLEKYVQSDGATDE 1267 (1267)
Q Consensus 1238 cH~G--~gGHYicfvr~~~~g~W~~fDDs~V~ 1267 (1267)
+|.| ++|||+||+|++.+|+||.|||+.|+
T Consensus 291 ~H~G~~~~GHY~~~~~~~~~~~W~~~nD~~V~ 322 (348)
T 3nhe_A 291 NHSGTTMGGHYTAYCRSPGTGEWHTFNDSSVT 322 (348)
T ss_dssp EEEECSSCEEEEEEEECTTTCCEEEEETTEEE
T ss_pred EccCCCCCcccEEEEccCCCCcEEEEeCCCce
Confidence 9999 89999999997668999999999884
No 3
>2gfo_A Ubiquitin carboxyl-terminal hydrolase 8; protease, thiol protease, UBL conjugation pathway deubiquitinating enzyme, DUB, zinc ribbon; 2.00A {Homo sapiens} SCOP: d.3.1.9 PDB: 3n3k_A
Probab=100.00 E-value=1.9e-44 Score=419.26 Aligned_cols=283 Identities=17% Similarity=0.228 Sum_probs=217.5
Q ss_pred hhccCCCCCCcchHHHHHHHhhCcHHHHHHHhccCccccCCC-----CCCcHHHHHHHHHHHHhcccCCCCccccccchH
Q 037237 943 YWRQFENGTTDSFVNMIVKSLWHLREFREEFMRRRQTIHNHI-----GDPCIVCALYDMFAALSTACEDNQVEVPSAPSS 1017 (1267)
Q Consensus 943 ~gL~N~~GgNTCFLNSILQcL~H~p~fRe~fLs~~~~~h~~~-----~~~CV~CAL~~LFsal~~ss~~~~~e~~vsPs~ 1017 (1267)
.||.|. |||||||||||||+|+|+||++|+...+..+... ...++.+++..+|.+++.+. .. .+.|..
T Consensus 63 ~GL~Nl--GNTCYmNSvLQ~L~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~----~~-~i~P~~ 135 (396)
T 2gfo_A 63 TGLRNL--GNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKALWTGQ----YR-YISPKD 135 (396)
T ss_dssp CEECCS--SSCHHHHHHHHHHHTCHHHHHHHHTTTHHHHCCTTCTTSCTTHHHHHHHHHHHHHHHSC----EE-EECCHH
T ss_pred cccccc--CCchhHhHHHHHhhCCHHHHHHHHcCcchhhhcccCCCCcccHHHHHHHHHHHHHHcCC----Cc-eECHHH
Confidence 799997 9999999999999999999999997543212111 12478899999999988653 22 799999
Q ss_pred HHHHHHhcccchHHHhhhhccchHHHHHHHHHHHhhhccCCC--CCcCCccc--------ccCCCCCC--CCCchheeee
Q 037237 1018 LRVALTTYSYDKNICKQAKMNDSSELLQAILESLHESFDTVN--CDFQSQDE--------YEGSLDCS--SAGCFVHIIF 1085 (1267)
Q Consensus 1018 Lr~aLs~i~~ds~~F~~g~QqDAhEfL~~LLd~LH~s~~~~~--~~~es~e~--------~~~s~~~~--~~~CIIHqLF 1085 (1267)
|+.++..+.+ .|..+.||||||||.+|||.||..+.... ...+.... ....|... ...++|+++|
T Consensus 136 f~~~l~~~~~---~f~~~~QqDA~EFl~~LLd~L~~el~~~~~~~~~~~~~~~~~~~~~~a~~~w~~~~~~~~s~I~~lF 212 (396)
T 2gfo_A 136 FKITIGKIND---QFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALF 212 (396)
T ss_dssp HHHHHHHHCG---GGSSSSCCCHHHHHHHHHHHHHHHHCCCCC---------TTSCHHHHHHHHHHHHHHHCCSHHHHHH
T ss_pred HHHHHHHhch---hhcCCCCCChHHHHHHHHHHHHHHHhhhccccccccccccccchhhHHHHHHHHhhhccCCccchhh
Confidence 9999999877 89999999999999999999999986532 00000000 00012111 1468999999
Q ss_pred eeEeEeEEecCCCCCcccc-cccccceeeccchhccccccCCCCCcHHHHHHHhc------cCCcccCCcCCCccc--ee
Q 037237 1086 GMDHYEKVNCVKCSAKFGY-RKYTSLFLTLNAYNLRNMKKTPRGSSFDVLLKQLV------LNGLLNCGACGQINY--IH 1156 (1267)
Q Consensus 1086 Gg~LrSqV~C~~Cg~~S~t-~pf~~l~l~I~as~l~~~k~~~~~~SF~~lLk~~~------~~~~~~C~~Cgk~~~--kq 1156 (1267)
+|.++++++|..|+++|.+ +||.++.++|+... ..+++++|+.+. .+++|.|++|++.+. ++
T Consensus 213 ~G~l~s~i~C~~C~~~s~~~e~f~~LsL~ip~~~---------~~sL~~~L~~f~~~E~l~~~n~~~C~~C~~~~~a~k~ 283 (396)
T 2gfo_A 213 QGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTS---------KCTLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKK 283 (396)
T ss_dssp CEEEEEEEEETTTCCEEEEEEEESSEEECCSCSS---------EEEHHHHHHHHTSCEEECSTTCEEETTTTEEECEEEE
T ss_pred CcEEEEEEEeCCCCceecccccceeeeecccccc---------cCCHHHHHHHhCCcccccCCcccccCCcccccceEEE
Confidence 9999999999999999988 79988888876521 147899998764 346799999998764 67
Q ss_pred hccccCCcEEEEEeeccccchhhhhhhcccccceeeecccCCCCcchhhhhhhhcccc-cccCCcccCCC-CCCCeEEEE
Q 037237 1157 HTLWRLPHVFTIGMLRVCNTIEIEVIFGYSWLEFAVIGWQRDCESSEDVLSTLSALSA-ELDISNLFEGY-PPDNIYFLA 1234 (1267)
Q Consensus 1157 ~tI~rlP~VLtIhLKRFeh~~~~~~~f~~~~~~~~v~~w~~~~~s~~dIs~tl~~~~~-~LDLs~ly~g~-d~~~~Y~L~ 1234 (1267)
..|.++|+||+||||||. |.+....+. .+.+.||. .|||+++..+. .....|+|+
T Consensus 284 ~~i~~lP~vLiihLkRF~--------------------~~~~~~~K~---~~~v~fp~~~Ldl~~~~~~~~~~~~~Y~L~ 340 (396)
T 2gfo_A 284 IEIWKLPPVLLVHLKRFS--------------------YDGRWKQKL---QTSVDFPLENLDLSQYVIGPKNNLKKYNLF 340 (396)
T ss_dssp EEEEECCSEEEEEECCEE--------------------ECSSSEEEC---CCEEECCSSCBCCGGGBCSCCSSCCCBEEE
T ss_pred EEEecCCcEEEEEeccee--------------------ccCccceec---CceEecchhhccccccccCCCCCCceEEEE
Confidence 889999999999999996 221111111 23367885 69999977653 345789999
Q ss_pred EEEEEec--CCCcEEEEEEecCCCcEEEecCCCCC
Q 037237 1235 SMVCVSS--DRQRYIIFVYNHMLEKYVQSDGATDE 1267 (1267)
Q Consensus 1235 aVVcH~G--~gGHYicfvr~~~~g~W~~fDDs~V~ 1267 (1267)
|||+|+| ++|||+||+|+..+++||.|||+.|+
T Consensus 341 avv~H~G~~~~GHY~a~v~~~~~~~W~~fnD~~V~ 375 (396)
T 2gfo_A 341 SVSNHYGGLDGGHYTAYCKNAARQRWFKFDDHEVS 375 (396)
T ss_dssp EEEEEESCTTTCEEEEEEEETTTTEEEEEETTEEE
T ss_pred EEEEecCCCCCCceEEEEcCCCCCCEEEEeCCCeE
Confidence 9999999 89999999998667999999999884
No 4
>3i3t_A Ubiquitin carboxyl-terminal hydrolase 21; hydrolase, structural genomics consortium, SGC, activator, alternative splicing, chromatin regulator, nucleus, polymorphism, protease; 2.59A {Homo sapiens} SCOP: d.3.1.0 PDB: 2y5b_A 3mtn_A
Probab=100.00 E-value=3.1e-44 Score=405.69 Aligned_cols=286 Identities=14% Similarity=0.152 Sum_probs=211.7
Q ss_pred hhccCCCCCCcchHHHHHHHhhCcHHHHHHHhccCccccCC--CCCCcHHHHHHHHHHHHhcccCCCCccccccchHHHH
Q 037237 943 YWRQFENGTTDSFVNMIVKSLWHLREFREEFMRRRQTIHNH--IGDPCIVCALYDMFAALSTACEDNQVEVPSAPSSLRV 1020 (1267)
Q Consensus 943 ~gL~N~~GgNTCFLNSILQcL~H~p~fRe~fLs~~~~~h~~--~~~~CV~CAL~~LFsal~~ss~~~~~e~~vsPs~Lr~ 1020 (1267)
.||.|. |||||||||||||+|+|+||++|++........ ....|+.++|..+|..++.... .. ++.|..|+.
T Consensus 4 ~GL~N~--GNtCY~NSvLQ~L~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~---~~-~v~p~~~~~ 77 (355)
T 3i3t_A 4 VGLRNL--GNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWHPDS---CE-AVNPTRFRA 77 (355)
T ss_dssp CCBCCC--SSTHHHHHHHHHHHTCHHHHHHHHHTTHHHHC------CHHHHHHHHHHHHTSSCSS---CC-CBCCHHHHH
T ss_pred cCcEEC--CcchHHHHHHHHHhCCHHHHHHHHhchHHHhcCCCCchhHHHHHHHHHHHHHhcCCC---CC-cccHHHHHH
Confidence 689997 999999999999999999999999753221111 1234899999999999986432 23 799999999
Q ss_pred HHHhcccchHHHhhhhccchHHHHHHHHHHHhhhccCCCCCcCCcc-c-------c-----------------cCCCCC-
Q 037237 1021 ALTTYSYDKNICKQAKMNDSSELLQAILESLHESFDTVNCDFQSQD-E-------Y-----------------EGSLDC- 1074 (1267)
Q Consensus 1021 aLs~i~~ds~~F~~g~QqDAhEfL~~LLd~LH~s~~~~~~~~es~e-~-------~-----------------~~s~~~- 1074 (1267)
+|....+ .|..+.||||||||.+||+.||..+........... + . ...|..
T Consensus 78 ~l~~~~~---~f~~~~QqDA~Efl~~LLd~L~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (355)
T 3i3t_A 78 VFQKYVP---SFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRY 154 (355)
T ss_dssp HHHHHCG---GGCSSCCCBHHHHHHHHHHHHHHHHCCC----------------------------CCHHHHHHHHHHHH
T ss_pred HHHHhCh---hhCCCCccCHHHHHHHHHHHHHHHHhhhccCCCcccccCcccCccccccccccCCCCCHHHHHHHHHHHh
Confidence 9999887 899999999999999999999999865320000000 0 0 000100
Q ss_pred -CCCCchheeeeeeEeEeEEecCCCCCcccc-cccccceeeccchhccccccCCCCCcHHHHHHHhc------cCCcccC
Q 037237 1075 -SSAGCFVHIIFGMDHYEKVNCVKCSAKFGY-RKYTSLFLTLNAYNLRNMKKTPRGSSFDVLLKQLV------LNGLLNC 1146 (1267)
Q Consensus 1075 -~~~~CIIHqLFGg~LrSqV~C~~Cg~~S~t-~pf~~l~l~I~as~l~~~k~~~~~~SF~~lLk~~~------~~~~~~C 1146 (1267)
....++|+++|+|.++++++|..|++.|.+ ++|.++.++|+..... .+..++.++|+.+. .+++|.|
T Consensus 155 ~~~~~s~i~~~F~g~~~~~~~C~~C~~~s~~~e~f~~lsl~i~~~~~~-----~~~~sl~~~L~~~~~~e~l~~~n~~~C 229 (355)
T 3i3t_A 155 LEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFA-----GGKVSLRDCFNLFTKEEELESENAPVC 229 (355)
T ss_dssp HHHCCSHHHHHHCEEEEEEEEETTTCCEEEEEEEESSEEECCCC------------CBHHHHHHHHHCCEEECGGGCCCC
T ss_pred hhccCCcccccccEEEEeeEEeCCCCCCceeeccceeecccCCccccc-----cCccCHHHHHHHhCCccccCCCCCeeC
Confidence 013578999999999999999999999987 7888888887653211 12358999998864 3456999
Q ss_pred CcCCCccc--eehccccCCcEEEEEeeccccchhhhhhhcccccceeeecccCCCCcchhhhhhhhcccc-cccCCcccC
Q 037237 1147 GACGQINY--IHHTLWRLPHVFTIGMLRVCNTIEIEVIFGYSWLEFAVIGWQRDCESSEDVLSTLSALSA-ELDISNLFE 1223 (1267)
Q Consensus 1147 ~~Cgk~~~--kq~tI~rlP~VLtIhLKRFeh~~~~~~~f~~~~~~~~v~~w~~~~~s~~dIs~tl~~~~~-~LDLs~ly~ 1223 (1267)
++|++.+. ++..|.++|+||+||||||+. ......+. .+.+.||. .|||+++..
T Consensus 230 ~~C~~~~~a~k~~~i~~lP~vL~i~lkRF~~--------------------~~~~~~K~---~~~v~fp~~~l~l~~~~~ 286 (355)
T 3i3t_A 230 DRCRQKTRSTKKLTVQRFPRILVLHLNRFSA--------------------SRGSIKKS---SVGVDFPLQRLSLGDFAS 286 (355)
T ss_dssp SSSCCCCCEEEEEEEEECCSEEEEEECCEEC--------------------CSSCCEEC---CCCCBCCSSCEECGGGBC
T ss_pred CCCCCccceEEEEEcccCChheEEEhhheec--------------------CCCCceEC---CcceeCCccccCchhhcc
Confidence 99998865 678899999999999999972 22111122 23357884 599998776
Q ss_pred CCCCCCeEEEEEEEEEec--CCCcEEEEEEecCCCcEEEecCCCCC
Q 037237 1224 GYPPDNIYFLASMVCVSS--DRQRYIIFVYNHMLEKYVQSDGATDE 1267 (1267)
Q Consensus 1224 g~d~~~~Y~L~aVVcH~G--~gGHYicfvr~~~~g~W~~fDDs~V~ 1267 (1267)
.......|+|+|||+|.| ++|||+||+|. .++||.|||+.|+
T Consensus 287 ~~~~~~~Y~L~avv~H~G~~~~GHY~~~~~~--~~~W~~~nD~~V~ 330 (355)
T 3i3t_A 287 DKAGSPVYQLYALCNHSGSVHYGHYTALCRC--QTGWHVYNDSRVS 330 (355)
T ss_dssp ----CCEEEEEEEEEEEEETTEEEEEEEEEE--TTEEEEEETTEEE
T ss_pred CCCCCcceEEEEEEEecCCCCCCeEEEEEEc--CCeEEEEcCCCcE
Confidence 545567999999999998 88999999994 5789999999884
No 5
>2ayn_A Ubiquitin carboxyl-terminal hydrolase 14; deubiquitinating enzymes, DUB, USP14, proteasome, enzyme mechanism; 3.20A {Homo sapiens} SCOP: d.3.1.9 PDB: 2ayo_A
Probab=100.00 E-value=9.9e-44 Score=410.91 Aligned_cols=285 Identities=14% Similarity=0.150 Sum_probs=211.9
Q ss_pred hhhhhhccCCCCCCcchHHHHHHHhhCcHHHHHHHhccCccc-cCCC--CCCcHHHHHHHHHHHHhcccCCCCccccccc
Q 037237 939 AYLEYWRQFENGTTDSFVNMIVKSLWHLREFREEFMRRRQTI-HNHI--GDPCIVCALYDMFAALSTACEDNQVEVPSAP 1015 (1267)
Q Consensus 939 ~~l~~gL~N~~GgNTCFLNSILQcL~H~p~fRe~fLs~~~~~-h~~~--~~~CV~CAL~~LFsal~~ss~~~~~e~~vsP 1015 (1267)
.....||.|. |||||||||||||+|+|+||++|++..... ..+. ...|++|+|+.+|..+..+. . ++.|
T Consensus 11 ~~~~~GL~Nl--GNTCYmNSvLQ~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lf~~l~~~~-----~-~v~P 82 (404)
T 2ayn_A 11 MELPCGLTNL--GNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTS-----S-SIPP 82 (404)
T ss_dssp CCCCCEECCC--SSCHHHHHHHHHHHTCHHHHHHHHTCCCCC------CHHHHHHHHHHHHHHHHHHHC-----S-EECC
T ss_pred cCCCCCcccC--CcccHHHHHHHHHHcCHHHHHHHHhcccccccCCCCCcccHHHHHHHHHHHHHhcCC-----C-cCCh
Confidence 3456999997 899999999999999999999999854221 1111 13499999999999998642 2 7999
Q ss_pred hHHHHHHHhcccchHHHh------hhhccchHHHHHHHHHHHhhhccCCCCCcCCcc-cccCCCCCC--CCCchheeeee
Q 037237 1016 SSLRVALTTYSYDKNICK------QAKMNDSSELLQAILESLHESFDTVNCDFQSQD-EYEGSLDCS--SAGCFVHIIFG 1086 (1267)
Q Consensus 1016 s~Lr~aLs~i~~ds~~F~------~g~QqDAhEfL~~LLd~LH~s~~~~~~~~es~e-~~~~s~~~~--~~~CIIHqLFG 1086 (1267)
..|..+|+...+ .|. .+.||||||||.+||+.||..+....... ..+ .....|... ...|+|+++|+
T Consensus 83 ~~~~~~l~~~~~---~f~~~~~~~~~~QqDA~Efl~~lLd~L~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~s~i~~~F~ 158 (404)
T 2ayn_A 83 IILLQFLHMAFP---QFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDS-VKETDSSSASAATPSKKKSLIDQFFG 158 (404)
T ss_dssp HHHHHHHHHHCG---GGGCBCTTSCBCCCCHHHHHHHHHHHHHTTSCCCCCC-------------------CCHHHHHTC
T ss_pred HHHHHHHHHhCc---hhhccccCCCccccCHHHHHHHHHHHHHHHhccccCCc-ccccchhhhhhhhccccCchhhhhcc
Confidence 999999999877 776 47899999999999999999886532000 000 001112211 35689999999
Q ss_pred eEeEeEEecCCCCCcc--cc-cccccceeeccchhccccccCCCCCcHHHHHHHhc-cCCcccCCcCCCccc--eehccc
Q 037237 1087 MDHYEKVNCVKCSAKF--GY-RKYTSLFLTLNAYNLRNMKKTPRGSSFDVLLKQLV-LNGLLNCGACGQINY--IHHTLW 1160 (1267)
Q Consensus 1087 g~LrSqV~C~~Cg~~S--~t-~pf~~l~l~I~as~l~~~k~~~~~~SF~~lLk~~~-~~~~~~C~~Cgk~~~--kq~tI~ 1160 (1267)
|.++++++|..||+.| .+ +||.++.++|+.. ..++.++|+.+. ..-.+.|+.|++.+. ++..|.
T Consensus 159 G~l~s~i~C~~C~~~s~s~~~e~f~~Lsl~i~~~----------~~~l~~~L~~~~~e~l~~~c~~c~~~~~~~k~~~i~ 228 (404)
T 2ayn_A 159 VEFETTMKCTESEEEEVTKGKENQLQLSCFINQE----------VKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKIS 228 (404)
T ss_dssp EEEEEEEEESSSCCCCCBCCEEEESSEEEECSSS----------CCBHHHHHHHTTEECCCCEETTTTEECCEEEEEEEE
T ss_pred EEEEEEEEecCCCCccCceeeccCceEEeecCCC----------cccHHHHHHHhcccceeecchhhCCccceeeeeeHh
Confidence 9999999999999996 34 7898888877642 147888887753 233588999998754 678899
Q ss_pred cCCcEEEEEeeccccchhhhhhhcccccceeeecccCCCCcchhhhhhhhcccccccCCcccCC----------------
Q 037237 1161 RLPHVFTIGMLRVCNTIEIEVIFGYSWLEFAVIGWQRDCESSEDVLSTLSALSAELDISNLFEG---------------- 1224 (1267)
Q Consensus 1161 rlP~VLtIhLKRFeh~~~~~~~f~~~~~~~~v~~w~~~~~s~~dIs~tl~~~~~~LDLs~ly~g---------------- 1224 (1267)
++|+||+||||||... .|.+ ...+. .+.+.||..|||+++...
T Consensus 229 ~lP~vL~i~LkRF~~~-----------------~~~~-~~~Ki---~~~v~fP~~Ldl~~~~~~~~~~~~~~~~~~~~~~ 287 (404)
T 2ayn_A 229 RLPAYLTIQMVRFFYK-----------------EKES-VNAKV---LKDVKFPLMLDMYELCTPELQEKMVSFRSKFKDL 287 (404)
T ss_dssp ECCSSEEEEEECBCCC-----------------CSSS-SCCBC---CCCCBCCSEEECGGGBCHHHHHHTTTTTGGGTCT
T ss_pred hCCCceEEEEEEEEEe-----------------cccC-ceecc---CceeccCceeEHhHhcChhhhhhcchhhhHHhhh
Confidence 9999999999999621 0111 11122 233678999999986631
Q ss_pred ----------------------------------CCCCCeEEEEEEEEEec---CCCcEEEEEEecCCCcEEEecCCCCC
Q 037237 1225 ----------------------------------YPPDNIYFLASMVCVSS---DRQRYIIFVYNHMLEKYVQSDGATDE 1267 (1267)
Q Consensus 1225 ----------------------------------~d~~~~Y~L~aVVcH~G---~gGHYicfvr~~~~g~W~~fDDs~V~ 1267 (1267)
......|+|+|||+|.| ++|||+||+|+. +++||.|||+.|+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Y~L~avv~H~G~s~~~GHY~a~v~~~-~~~W~~fnD~~V~ 366 (404)
T 2ayn_A 288 EDKKVNQQPNTSDKKSSPQKEVKYEPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKRK-QDEWIKFDDDKVS 366 (404)
T ss_dssp TC----------------------CCCCCSCTTTTCCCSEEEEEEEEEEESSSTTSSEEEEEEEEE-TTEEEEEBTTBCC
T ss_pred hcccchhhhhhccccccccccccccccccccccCcCCCceEEEEEEEEecCCCCCCCCeEEEEECC-CCeEEEeecccce
Confidence 11247899999999999 789999999963 8999999999985
No 6
>1nb8_A Ubiquitin carboxyl-terminal hydrolase 7; UBP, deubiquitination, hausp, P53 binding; 2.30A {Homo sapiens} SCOP: d.3.1.9 PDB: 1nbf_A
Probab=100.00 E-value=1.7e-43 Score=404.78 Aligned_cols=261 Identities=12% Similarity=0.173 Sum_probs=205.6
Q ss_pred hhccCCCCCCcchHHHHHHHhhCcHHHHHHHhccCccccCCCCCCcHHHHHHHHHHHHhcccCCCCccccccchHHHHHH
Q 037237 943 YWRQFENGTTDSFVNMIVKSLWHLREFREEFMRRRQTIHNHIGDPCIVCALYDMFAALSTACEDNQVEVPSAPSSLRVAL 1022 (1267)
Q Consensus 943 ~gL~N~~GgNTCFLNSILQcL~H~p~fRe~fLs~~~~~h~~~~~~CV~CAL~~LFsal~~ss~~~~~e~~vsPs~Lr~aL 1022 (1267)
.||.|. |||||||||||||+|+|+||++|+.... .......|+.|+|+.+|..+..+. . ++.|..|..++
T Consensus 7 ~GL~Nl--GnTCYmNSvLQ~L~~~~~~r~~~~~~~~--~~~~~~~~~~~~l~~lf~~l~~~~-----~-~~~~~~l~~~~ 76 (353)
T 1nb8_A 7 VGLKNQ--GATCYMNSLLQTLFFTNQLRKAVYMMPT--EGDDSSKSVPLALQRVFYELQHSD-----K-PVGTKKLTKSF 76 (353)
T ss_dssp CCBCCC--STTTTHHHHHHHHHTCHHHHHHHHTSCC--TTSCTTTCHHHHHHHHHHHHHHCS-----S-CBCCHHHHHHH
T ss_pred CCcccC--chhhHHHHHHHHHHCCHHHHHHHHhCCC--CCCcccccHHHHHHHHHHHHhhcC-----C-CCCCHHHHhhc
Confidence 799996 8999999999999999999999986431 112234599999999999998643 2 68899888777
Q ss_pred HhcccchHHHhhhhccchHHHHHHHHHHHhhhccCCCCCcCCcccccCCCCCCCCCchheeeeeeEeEeEEecCCCCCcc
Q 037237 1023 TTYSYDKNICKQAKMNDSSELLQAILESLHESFDTVNCDFQSQDEYEGSLDCSSAGCFVHIIFGMDHYEKVNCVKCSAKF 1102 (1267)
Q Consensus 1023 s~i~~ds~~F~~g~QqDAhEfL~~LLd~LH~s~~~~~~~~es~e~~~~s~~~~~~~CIIHqLFGg~LrSqV~C~~Cg~~S 1102 (1267)
.. + .|..+.||||||||.+||+.||..+... ...++|+++|+|.+.++++|..|++.|
T Consensus 77 ~~--~---~~~~~~QqDA~EFl~~LLd~L~~~~~~~-----------------~~~s~i~~~F~g~~~~~i~C~~C~~~s 134 (353)
T 1nb8_A 77 GW--E---TLDSFMQHDVQELCRVLLDNVENKMKGT-----------------CVEGTIPKLFRGKMVSYIQCKEVDYRS 134 (353)
T ss_dssp TC--C---BTTTTTTSCHHHHHHHHHHHHHHHTTTS-----------------TTTTHHHHHHCEEEEEEEEESSSCCEE
T ss_pred CC--C---CCCcccchhHHHHHHHHHHHHHHHhcCC-----------------CccchhhhhceeEEEEEEEeccCCCee
Confidence 42 3 5778899999999999999999976431 135799999999999999999999999
Q ss_pred cc-cccccceeeccchhccccccCCCCCcHHHHHHHhc------cCCcccCCcCCCccc-eehccccCCcEEEEEeeccc
Q 037237 1103 GY-RKYTSLFLTLNAYNLRNMKKTPRGSSFDVLLKQLV------LNGLLNCGACGQINY-IHHTLWRLPHVFTIGMLRVC 1174 (1267)
Q Consensus 1103 ~t-~pf~~l~l~I~as~l~~~k~~~~~~SF~~lLk~~~------~~~~~~C~~Cgk~~~-kq~tI~rlP~VLtIhLKRFe 1174 (1267)
.+ +||.++.++|+. ..++.++|+.+. .+++|.|+.|+.... ++..|.++|+||+||||||.
T Consensus 135 ~~~e~f~~LsL~i~~-----------~~~l~~~L~~~~~~E~l~~~~~~~C~~c~~~~a~k~~~i~~lP~vL~i~LkRF~ 203 (353)
T 1nb8_A 135 DRREDYYDIQLSIKG-----------KKNIFESFVDYVAVEQLDGDNKYDAGEHGLQEAEKGVKFLTLPPVLHLQLMRFM 203 (353)
T ss_dssp EEEEEESCEEECCTT-----------CSBHHHHHHHHTCCEEECTTTCEECGGGCEECEEEEEEESCCCSEEEEEECCCC
T ss_pred ceeeeeEEEEEEECC-----------CcchHHHHHHhhCccccCCCccccCCcCccEeeEEEEEhhcCCCceEEEEecEE
Confidence 87 788888877653 146778877643 346799999986544 67889999999999999996
Q ss_pred cchhhhhhhcccccceeeecccCCCCcchhhhhhhhcccccccCCcccCCCC--CCCeEEEEEEEEEec--CCCcEEEEE
Q 037237 1175 NTIEIEVIFGYSWLEFAVIGWQRDCESSEDVLSTLSALSAELDISNLFEGYP--PDNIYFLASMVCVSS--DRQRYIIFV 1250 (1267)
Q Consensus 1175 h~~~~~~~f~~~~~~~~v~~w~~~~~s~~dIs~tl~~~~~~LDLs~ly~g~d--~~~~Y~L~aVVcH~G--~gGHYicfv 1250 (1267)
.. ...|... +. .+.+.||..|||++++...+ .+..|+|+|||+|.| ++|||+||+
T Consensus 204 ~~---------------~~~~~~~---K~---~~~v~fp~~Ldl~~~~~~~~~~~~~~Y~L~avv~H~G~~~~GHY~a~v 262 (353)
T 1nb8_A 204 YD---------------PQTDQNI---KI---NDRFEFPEQLPLDEFLQKTDPKDPANYILHAVLVHSGDNHGGHYVVYL 262 (353)
T ss_dssp -----------------------C---CC---CCCCBCCSEEECGGGBSSCCTTSCCEEEEEEEEEEESSTTCCCEEEEE
T ss_pred Ee---------------cccCceE---ec---CcEEECCCeeehhhhhcccCCCCCceEEEEEEEEEeCCCCCcEEEEEE
Confidence 21 1112111 11 23367999999999876543 357999999999999 889999999
Q ss_pred EecCCCcEEEecCCCCC
Q 037237 1251 YNHMLEKYVQSDGATDE 1267 (1267)
Q Consensus 1251 r~~~~g~W~~fDDs~V~ 1267 (1267)
|+..+|+||.|||+.|+
T Consensus 263 ~~~~~~~W~~fnD~~V~ 279 (353)
T 1nb8_A 263 NPKGDGKWCKFDDDVVS 279 (353)
T ss_dssp CTTSSSCCEEEETTEEE
T ss_pred ecCCCCCEEEEECcceE
Confidence 97668999999999884
No 7
>3mhs_A Ubiquitin carboxyl-terminal hydrolase 8; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3mhh_A 4fjc_A 4fk5_A 4fip_A 3m99_A
Probab=100.00 E-value=4.2e-42 Score=407.16 Aligned_cols=284 Identities=17% Similarity=0.226 Sum_probs=211.6
Q ss_pred hhccCCCCCCcchHHHHHHHhhCcHHHHHHHhccCccccCC--CCCCcHHHHHHHHHHHHhcccCC-----CCccccccc
Q 037237 943 YWRQFENGTTDSFVNMIVKSLWHLREFREEFMRRRQTIHNH--IGDPCIVCALYDMFAALSTACED-----NQVEVPSAP 1015 (1267)
Q Consensus 943 ~gL~N~~GgNTCFLNSILQcL~H~p~fRe~fLs~~~~~h~~--~~~~CV~CAL~~LFsal~~ss~~-----~~~e~~vsP 1015 (1267)
.||.|. |||||||||||||+|+|+||++|+...+..... ....|+.|+|..+|..+...... ... ..+.|
T Consensus 142 ~GL~Nl--GNTCYmNSvLQ~L~~~p~fr~~~l~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~~~~~~~~~-~~~~~ 218 (476)
T 3mhs_A 142 SGLINM--GSTCFMSSILQCLIHNPYFIRHSMSQIHSNNCKVRSPDKCFSCALDKIVHELYGALNTKQASSSST-STNRQ 218 (476)
T ss_dssp CCCCCS--SSTHHHHHHHHHHHTCHHHHHHHHTTHHHHHCSSCCTTTCHHHHHHHHHHHHHSCCCC---------CCCSC
T ss_pred CCCCcC--CccHHHHHHHHHHhCCHHHHHHHHhcchhhhccCCCcccchHHHHHHHHHHHhhcccccccccccc-cccCc
Confidence 799997 999999999999999999999999754322211 22459999999999998864321 011 14667
Q ss_pred hHHHHHHHhcccchHHHhhhhccchHHHHHHHHHHHhhhccCCCCCcCCcccccCCCCCCCCCchheeeeeeEeEeEEec
Q 037237 1016 SSLRVALTTYSYDKNICKQAKMNDSSELLQAILESLHESFDTVNCDFQSQDEYEGSLDCSSAGCFVHIIFGMDHYEKVNC 1095 (1267)
Q Consensus 1016 s~Lr~aLs~i~~ds~~F~~g~QqDAhEfL~~LLd~LH~s~~~~~~~~es~e~~~~s~~~~~~~CIIHqLFGg~LrSqV~C 1095 (1267)
..+...|..++.....|.++.||||||||.+||+.||+.+........ + ........+.|+|+++|+|.++++++|
T Consensus 219 ~~~~~~l~~~~~~~~~f~~~~QqDA~EFl~~LLd~L~~~~~~~~~~~~--~--~~~~~~~~~~s~i~~~F~G~l~~~~~C 294 (476)
T 3mhs_A 219 TGFIYLLTCAWKINQNLAGYSQQDAHEFWQFIINQIHQSYVLDLPNAK--E--VSRANNKQCECIVHTVFEGSLESSIVC 294 (476)
T ss_dssp HHHHHHHHHHHHHCGGGSSSSCEEHHHHHHHHHHHHHHHHHHHCCC-----------CCCSCCSHHHHHSCEEEEEEEEC
T ss_pred chHHHHHHHHHHhccccCCCCCcCHHHHHHHHHHHHHHHHhhcccccc--c--ccccccccCCCcceeecceEEEEEEEE
Confidence 777776664433334899999999999999999999998754221000 0 001122346799999999999999999
Q ss_pred CCCCCcccc--cccccceeeccchhccccccCCCCCcHHHHHHHhcc-----CCcccCCcCCCccc--eehccccCCcEE
Q 037237 1096 VKCSAKFGY--RKYTSLFLTLNAYNLRNMKKTPRGSSFDVLLKQLVL-----NGLLNCGACGQINY--IHHTLWRLPHVF 1166 (1267)
Q Consensus 1096 ~~Cg~~S~t--~pf~~l~l~I~as~l~~~k~~~~~~SF~~lLk~~~~-----~~~~~C~~Cgk~~~--kq~tI~rlP~VL 1166 (1267)
..|+++|.+ +||.++.++|+. ..+|.++|+.+.. ++.|.|++|++.+. ++..|.++|+||
T Consensus 295 ~~C~~~s~~~~e~f~~LsL~i~~-----------~~sl~~~L~~~~~~E~l~~~~~~C~~C~~~~~a~k~~~i~~lP~vL 363 (476)
T 3mhs_A 295 PGCQNNSKTTIDPFLDLSLDIKD-----------KKKLYECLDSFHKKEQLKDFNYHCGECNSTQDAIKQLGIHKLPSVL 363 (476)
T ss_dssp TTTCCCCEEEEEEESCEEECCTT-----------CCBHHHHHHHHHCCEECSSCCCEETTTTEECCCEEEEEEEEBCSEE
T ss_pred CCCCCeeCCcccchhhhccchhh-----------hhHHHHHHHHhcChhhccCCCCcCCccCCcccEEEEEEcccCCcce
Confidence 999999854 789888877653 2589999987642 34599999998754 678899999999
Q ss_pred EEEeeccccchhhhhhhcccccceeeecccCCCCcchhhhhhhhcccccccCCcccCCC----------CCCCeEEEEEE
Q 037237 1167 TIGMLRVCNTIEIEVIFGYSWLEFAVIGWQRDCESSEDVLSTLSALSAELDISNLFEGY----------PPDNIYFLASM 1236 (1267)
Q Consensus 1167 tIhLKRFeh~~~~~~~f~~~~~~~~v~~w~~~~~s~~dIs~tl~~~~~~LDLs~ly~g~----------d~~~~Y~L~aV 1236 (1267)
+||||||++. ..|.. .+. .+.+.||..|||+++.... .+...|+|+||
T Consensus 364 ~i~LkRF~~~----------------~~~~~---~K~---~~~V~fP~~Ldl~~~~~~~~~~~~~~~~~~~~~~Y~L~av 421 (476)
T 3mhs_A 364 VLQLKRFEHL----------------LNGSN---RKL---DDFIEFPTYLNMKNYCSTKEKDKHSENGKVPDIIYELIGI 421 (476)
T ss_dssp EEEECCEEEC----------------TTSCE---EEC---CCCCBCCSEEECGGGBSCCBCCC--CCCBCCCEEEEEEEE
T ss_pred EEEeeecccc----------------CCCCe---EEC---CEEEcCCCeeechhhcCcccccccccccCCCCCcEEEEEE
Confidence 9999999721 01211 121 3446799999999977432 13468999999
Q ss_pred EEEec--CCCcEEEEEEecCCCcEEEecCCCCC
Q 037237 1237 VCVSS--DRQRYIIFVYNHMLEKYVQSDGATDE 1267 (1267)
Q Consensus 1237 VcH~G--~gGHYicfvr~~~~g~W~~fDDs~V~ 1267 (1267)
|+|.| ++|||+||+|.. +|+||.|||+.|+
T Consensus 422 v~H~G~~~~GHY~a~vr~~-~~~W~~fnD~~V~ 453 (476)
T 3mhs_A 422 VSHKGTVNEGHYIAFCKIS-GGQWFKFNDSMVS 453 (476)
T ss_dssp EEEEECSSSEEEEEEEECT-TSCEEEEETTEEE
T ss_pred EEeCCCCCCCceEEEEECC-CCcEEEEeCCceE
Confidence 99999 899999999953 7999999999884
No 8
>1vjv_A Ubiquitin carboxyl-terminal hydrolase 6; YFR010W, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE; 1.74A {Saccharomyces cerevisiae} SCOP: d.3.1.9
Probab=100.00 E-value=6e-42 Score=398.86 Aligned_cols=265 Identities=14% Similarity=0.153 Sum_probs=200.8
Q ss_pred hhhhhhccCCCCCCcchHHHHHHHhhCcHHHHHHHhccCccccCCCC--------CCcHHHHHHHHHHHHhcccCCCCcc
Q 037237 939 AYLEYWRQFENGTTDSFVNMIVKSLWHLREFREEFMRRRQTIHNHIG--------DPCIVCALYDMFAALSTACEDNQVE 1010 (1267)
Q Consensus 939 ~~l~~gL~N~~GgNTCFLNSILQcL~H~p~fRe~fLs~~~~~h~~~~--------~~CV~CAL~~LFsal~~ss~~~~~e 1010 (1267)
.....||.|. |||||||||||||+|+|+||++|+...... .+.. ..|++|+|+.+|..+..+. ..
T Consensus 21 ~~~~~GL~Nl--GNTCYmNSvLQ~L~~~p~fr~~ll~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lf~~l~~~~----~~ 93 (415)
T 1vjv_A 21 AQLPVGFKNM--GNTCYLNATLQALYRVNDLRDMILNYNPSQ-GVSNSGAQDEEIHKQIVIEMKRCFENLQNKS----FK 93 (415)
T ss_dssp CCCCCEECCC--SSCHHHHHHHHHHHHSHHHHHHHHTCCGGG-CCSCTTSTTHHHHHHHHHHHHHHHHHHHCC-----CC
T ss_pred CCCCCCCEeC--CcccHHHHHHHHHHcCHHHHHHHHhccccc-ccCCcccccccchhHHHHHHHHHHHHHhcCC----CC
Confidence 3456999997 999999999999999999999999854221 1111 2399999999999998643 22
Q ss_pred ccccchHHHHHHHhcccchHHHh-------hhhccchHHHHHHHHHHHhhhccCCCCCcCCcccccCCCCCCCCCchhee
Q 037237 1011 VPSAPSSLRVALTTYSYDKNICK-------QAKMNDSSELLQAILESLHESFDTVNCDFQSQDEYEGSLDCSSAGCFVHI 1083 (1267)
Q Consensus 1011 ~~vsPs~Lr~aLs~i~~ds~~F~-------~g~QqDAhEfL~~LLd~LH~s~~~~~~~~es~e~~~~s~~~~~~~CIIHq 1083 (1267)
++.|..|..+|+...+ .|. .+.||||||||.+||+.||..+. .++|++
T Consensus 94 -~v~p~~~~~~l~~~~~---~f~~~~~~~~~~~QqDa~Efl~~lLd~L~~~~~---------------------~~~i~~ 148 (415)
T 1vjv_A 94 -SVLPVVLLNTLRKCYP---QFAERDSQGGFYKQQDAEELFTQLFHSMSIVFG---------------------DKFSED 148 (415)
T ss_dssp -EECCHHHHHHHHHHCG---GGGCBC----CBCCCCHHHHHHHHHHHHHHHHT---------------------HHHHTT
T ss_pred -ccCHHHHHHHHHHhCc---hhhccccCCCCccccCHHHHHHHHHHHHHHHhc---------------------cchHHH
Confidence 7999999999999887 787 68899999999999999999653 168999
Q ss_pred eeeeEeEeEEecCCCCCccc--c-cccccceeeccchhccccccCCCCCcHHHHHHHhc-cCCcccCCcCCCccc--eeh
Q 037237 1084 IFGMDHYEKVNCVKCSAKFG--Y-RKYTSLFLTLNAYNLRNMKKTPRGSSFDVLLKQLV-LNGLLNCGACGQINY--IHH 1157 (1267)
Q Consensus 1084 LFGg~LrSqV~C~~Cg~~S~--t-~pf~~l~l~I~as~l~~~k~~~~~~SF~~lLk~~~-~~~~~~C~~Cgk~~~--kq~ 1157 (1267)
+|+ .+.++++|..|++.|. + ++|.++.++|+.. ..++.++|+.+. ....+.|+.|++.+. ++.
T Consensus 149 ~F~-~~~~~~~C~~C~~~s~s~~~e~f~~Lsl~i~~~----------~~~l~~~L~~~~~e~i~~~c~~c~~~~~a~k~~ 217 (415)
T 1vjv_A 149 FRI-QFKTTIKDTANDNDITVKENESDSKLQCHISGT----------TNFMRNGLLEGLNEKIEKRSDLTGANSIYSVEK 217 (415)
T ss_dssp TCE-EEEEEEEETTEEEEEEEECCCEESCEEECCCTT----------CCBHHHHHHHHHEEC---------CCCCEEEEE
T ss_pred HHH-hheEEEEECCCCCCccccccccceeeeeccccc----------cchHHHHHHHHhhhhhhhcccccCCcccEEEEE
Confidence 999 9999999999999972 3 7888888777642 147888887643 333588999988764 678
Q ss_pred ccccCCcEEEEEeeccccchhhhhhhcccccceeeecccCCCCcchhhhhhhhcccccccCCcccCC-------------
Q 037237 1158 TLWRLPHVFTIGMLRVCNTIEIEVIFGYSWLEFAVIGWQRDCESSEDVLSTLSALSAELDISNLFEG------------- 1224 (1267)
Q Consensus 1158 tI~rlP~VLtIhLKRFeh~~~~~~~f~~~~~~~~v~~w~~~~~s~~dIs~tl~~~~~~LDLs~ly~g------------- 1224 (1267)
.|.++|+||+||||||.. ........+ + .+.+.||..|||+++...
T Consensus 218 ~i~~lP~vL~i~LkRF~~------------------~~~~~~~~K--i-~~~V~FP~~Ldl~~~~~~~~~~~~~~~r~~~ 276 (415)
T 1vjv_A 218 KISRLPKFLTVQYVRFFW------------------KRSTNKKSK--I-LRKVVFPFQLDVADMLTPEYAAEKVKVRDEL 276 (415)
T ss_dssp EEEECBSEEEEEECCEEE------------------ETTTTEEEE--C-CCCCBCCSEEECGGGBCHHHHHHHHHHHHHH
T ss_pred EcccCCCeeEEEEEEEEE------------------eCCCCcchh--h-cCccCCCcEeEhHHhcChhhhhhhhhhHHHH
Confidence 899999999999999962 111111112 1 233678999999986531
Q ss_pred ---------------------------------------------------------------CCCCCeEEEEEEEEEec
Q 037237 1225 ---------------------------------------------------------------YPPDNIYFLASMVCVSS 1241 (1267)
Q Consensus 1225 ---------------------------------------------------------------~d~~~~Y~L~aVVcH~G 1241 (1267)
......|+|+|||+|.|
T Consensus 277 ~~~~~~~~e~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~L~aVv~H~G 356 (415)
T 1vjv_A 277 RKVEKEKNEKEREIKRRKFDPSSSENVMTPREQYETQVALNESEKDQWLEEYKKHFPPNLEKGENPSCVYNLIGVITHQG 356 (415)
T ss_dssp HHHHHHHHHC----------------CCCHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCTTBCSSSEEEEEEEEEEES
T ss_pred HHHhhhhhhhhhhhhhccccccccccccccchhhhhchhhHHhhhhhhhhhcccccccccccccCCCceEEEEEEEEecC
Confidence 01247899999999999
Q ss_pred ---CCCcEEEEEEe-cCCCcEEEecCCCCC
Q 037237 1242 ---DRQRYIIFVYN-HMLEKYVQSDGATDE 1267 (1267)
Q Consensus 1242 ---~gGHYicfvr~-~~~g~W~~fDDs~V~ 1267 (1267)
++|||+||+|+ ..+++||.|||+.|+
T Consensus 357 ~s~~~GHY~a~vr~~~~~~~W~~fnD~~V~ 386 (415)
T 1vjv_A 357 ANSESGHYQAFIRDELDENKWYKFNDDKVS 386 (415)
T ss_dssp SSTTSSEEEEEEECSSCTTCEEEEETTEEE
T ss_pred CCCCCCCEEEEEeCCCCCCcEEEeECCcCe
Confidence 78999999996 458999999999884
No 9
>2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens}
Probab=100.00 E-value=6.2e-41 Score=402.63 Aligned_cols=261 Identities=12% Similarity=0.204 Sum_probs=204.9
Q ss_pred hhccCCCCCCcchHHHHHHHhhCcHHHHHHHhccCccccCCCCCCcHHHHHHHHHHHHhcccCCCCccccccchHHHHHH
Q 037237 943 YWRQFENGTTDSFVNMIVKSLWHLREFREEFMRRRQTIHNHIGDPCIVCALYDMFAALSTACEDNQVEVPSAPSSLRVAL 1022 (1267)
Q Consensus 943 ~gL~N~~GgNTCFLNSILQcL~H~p~fRe~fLs~~~~~h~~~~~~CV~CAL~~LFsal~~ss~~~~~e~~vsPs~Lr~aL 1022 (1267)
.||.|. ||||||||+||||+|+|+||++++.... .......|+.|+|+.+|..+..+. . ++.|..|..+|
T Consensus 176 ~GL~Nl--GnTCYmNSvLQ~L~~~~~fr~~~~~~~~--~~~~~~~~~~~~l~~lf~~l~~~~-----~-~~~~~~l~~~~ 245 (522)
T 2f1z_A 176 VGLKNQ--GATCYMNSLLQTLFFTNQLRKAVYMMPT--EGDDSSKSVPLALQRVFYELQHSD-----K-PVGTKKLTKSF 245 (522)
T ss_dssp CCBCCC----CTTHHHHHHHHHTCHHHHHHHHTCCC--CSSCTTTCHHHHHHHHHHHHHHCS-----S-CBCCTTHHHHT
T ss_pred cceecC--cccHHHHHHHHHHhccHHHHHHHhhccc--cCCcccchHHHHHHHHHHHHhcCC-----C-ccCcHHHHhhc
Confidence 799996 9999999999999999999999976421 112234589999999999998643 2 68888887766
Q ss_pred HhcccchHHHhhhhccchHHHHHHHHHHHhhhccCCCCCcCCcccccCCCCCCCCCchheeeeeeEeEeEEecCCCCCcc
Q 037237 1023 TTYSYDKNICKQAKMNDSSELLQAILESLHESFDTVNCDFQSQDEYEGSLDCSSAGCFVHIIFGMDHYEKVNCVKCSAKF 1102 (1267)
Q Consensus 1023 s~i~~ds~~F~~g~QqDAhEfL~~LLd~LH~s~~~~~~~~es~e~~~~s~~~~~~~CIIHqLFGg~LrSqV~C~~Cg~~S 1102 (1267)
.. + .|..+.||||||||.+||+.||..+... ...++|+++|+|.++++++|..|++.|
T Consensus 246 ~~--~---~~~~~~QqDa~Efl~~LLd~L~~~l~~~-----------------~~~s~i~~lF~G~~~s~i~C~~C~~~s 303 (522)
T 2f1z_A 246 GW--E---TLDSFMQHDVQELCRVLLDNVENKMKGT-----------------CVEGTIPKLFRGKMVSYIQCKEVDYRS 303 (522)
T ss_dssp CC--C---TTTSSTTSCHHHHHHHHHHHHHHHHTTS-----------------TTTTHHHHHHCEEEEEEECCSSSCCCC
T ss_pred CC--c---cCCCcccccHHHHHHHHHHHHHhhccCC-----------------ccccchhhheeEEEEEEEEcCCCCcee
Confidence 32 3 5778899999999999999999976531 125799999999999999999999999
Q ss_pred cc-cccccceeeccchhccccccCCCCCcHHHHHHHhc------cCCcccCCcCCCccc-eehccccCCcEEEEEeeccc
Q 037237 1103 GY-RKYTSLFLTLNAYNLRNMKKTPRGSSFDVLLKQLV------LNGLLNCGACGQINY-IHHTLWRLPHVFTIGMLRVC 1174 (1267)
Q Consensus 1103 ~t-~pf~~l~l~I~as~l~~~k~~~~~~SF~~lLk~~~------~~~~~~C~~Cgk~~~-kq~tI~rlP~VLtIhLKRFe 1174 (1267)
.+ ++|.++.++|+. ..++.++|+.+. .+++|.|+.|+.... ++..|.++|+||+||||||+
T Consensus 304 ~~~e~f~~LsL~i~~-----------~~~l~~~L~~~~~~E~l~~~n~~~C~~c~~~~a~k~~~i~~lP~vL~i~LkRF~ 372 (522)
T 2f1z_A 304 DRREDYYDIQLSIKG-----------KKNIFESFVDYVAVEQLDGDNKYDAGEHGLQEAEKGVKFLTLPPVLHLQLMRFM 372 (522)
T ss_dssp CEEEEESCEEECCTT-----------CCBHHHHHHHHTCEEEECTTSCBCCGGGCSBCEEEEEEESCCCSEEEEEECCEE
T ss_pred eeeeeeEEEEEEeCC-----------cccchHHHHHhhceeecCCcceeecCcCCccceEEEEEeecCCceEEEEEEeEE
Confidence 87 788888877653 146788887643 356899999986654 67889999999999999996
Q ss_pred cchhhhhhhcccccceeeecccCCCCcchhhhhhhhcccccccCCcccCCCC--CCCeEEEEEEEEEec--CCCcEEEEE
Q 037237 1175 NTIEIEVIFGYSWLEFAVIGWQRDCESSEDVLSTLSALSAELDISNLFEGYP--PDNIYFLASMVCVSS--DRQRYIIFV 1250 (1267)
Q Consensus 1175 h~~~~~~~f~~~~~~~~v~~w~~~~~s~~dIs~tl~~~~~~LDLs~ly~g~d--~~~~Y~L~aVVcH~G--~gGHYicfv 1250 (1267)
|.........+ .+.+.||..|||+++....+ .+..|+|+|||+|.| ++|||+||+
T Consensus 373 --------------------~~~~~~~~~Ki-~~~v~fp~~Ldl~~~~~~~~~~~~~~Y~L~avv~H~G~~~~GHY~a~v 431 (522)
T 2f1z_A 373 --------------------YDPQTDQNIKI-NDRFEFPEQLPLDEFLQKTDPKDPANYILHAVLVHSGDNHGGHYVVYL 431 (522)
T ss_dssp --------------------ECSSSSCEEEC-CCCCBCCSEEECGGGBSSCCTTSCCEEEEEEEEEEECSSSCSEEEEEE
T ss_pred --------------------EcccCCcceEc-CcEEeCCCeecchhhhccccCCCCcEEEEEEEEEecccCCCceEEEEE
Confidence 22111111112 23467999999999876543 357999999999999 899999999
Q ss_pred EecCCCcEEEecCCCCC
Q 037237 1251 YNHMLEKYVQSDGATDE 1267 (1267)
Q Consensus 1251 r~~~~g~W~~fDDs~V~ 1267 (1267)
|+..+|+||.|||+.|+
T Consensus 432 ~~~~~~~W~~fnD~~V~ 448 (522)
T 2f1z_A 432 NPKGDGKWCKFDDDVVS 448 (522)
T ss_dssp CTTSSSCCEEEETTEEE
T ss_pred ecCCCCCEEEEECceeE
Confidence 97668999999999884
No 10
>3ihp_A Ubiquitin carboxyl-terminal hydrolase 5; hydrolase, protease, thiol protease, UBL conjugation pathway, metal-binding, zinc-finger,structural genomics; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.6e-38 Score=397.64 Aligned_cols=207 Identities=11% Similarity=0.076 Sum_probs=162.9
Q ss_pred hhccCCCCCCcchHHHHHHHhhCcHHHHHHHhccCccc---cCCCCCCcHHHHHHHHHHHHhcccCC-------------
Q 037237 943 YWRQFENGTTDSFVNMIVKSLWHLREFREEFMRRRQTI---HNHIGDPCIVCALYDMFAALSTACED------------- 1006 (1267)
Q Consensus 943 ~gL~N~~GgNTCFLNSILQcL~H~p~fRe~fLs~~~~~---h~~~~~~CV~CAL~~LFsal~~ss~~------------- 1006 (1267)
.||.|. |||||||||||||.|+|+||++|+...+.. .......|+.|+|+.+|..+......
T Consensus 345 ~GL~Nl--GNTCYmNSvLQ~L~~~p~fr~~ll~~~~~~~~~~~~~~~~~l~~~l~~L~~~L~s~~~s~~~~~~~~~~~~~ 422 (854)
T 3ihp_A 345 TGIRNL--GNSCYLNSVVQVLFSIPDFQRKYVDKLEKIFQNAPTDPTQDFSTQVAKLGHGLLSGEYSKPVPESGDGERVP 422 (854)
T ss_dssp CCBCCC--SSCHHHHHHHHHHTTSHHHHHHHTTTHHHHHHHCCSCGGGCHHHHHHHHHHHHHSCC---------------
T ss_pred cceEec--CCceehhHHHHHHhCcHHHHHHHHhhhhhhhccccCCccccHHHHHHHHHHHHhcccccccccccccccccc
Confidence 799997 999999999999999999999998643210 11122349999999999998753211
Q ss_pred ---CCccccccchHHHHHHHhcccchHHHhhhhccchHHHHHHHHHHHhhhccCCCCCcCCcccccCCCCCCCCCchhee
Q 037237 1007 ---NQVEVPSAPSSLRVALTTYSYDKNICKQAKMNDSSELLQAILESLHESFDTVNCDFQSQDEYEGSLDCSSAGCFVHI 1083 (1267)
Q Consensus 1007 ---~~~e~~vsPs~Lr~aLs~i~~ds~~F~~g~QqDAhEfL~~LLd~LH~s~~~~~~~~es~e~~~~s~~~~~~~CIIHq 1083 (1267)
... .++.|..|+.++....+ .|..+.||||||||.+||+.||..+.. ..+|++
T Consensus 423 ~~~~~~-~~isP~~f~~~l~~~~~---~F~~~~QQDA~EFl~~LLd~L~~el~~--------------------~s~i~~ 478 (854)
T 3ihp_A 423 EQKEVQ-DGIAPRMFKALIGKGHP---EFSTNRQQDAQEFFLHLINMVERNCRS--------------------SENPNE 478 (854)
T ss_dssp -------CCBCCHHHHHHHTTTCT---TTTSSSCCBHHHHHHHHHHHHHHTCTT--------------------SCCGGG
T ss_pred ccccCC-CccChHHHHHHHhhhcc---ccccccccCHHHHHHHHHHHHHHHhcc--------------------cCCchh
Confidence 122 27999999999999877 899999999999999999999996632 347899
Q ss_pred eeeeEeEeEEecCCCCCcccc-cccccceeeccchhcccc----------------ccC-----CCCCcHHHHHHHhccC
Q 037237 1084 IFGMDHYEKVNCVKCSAKFGY-RKYTSLFLTLNAYNLRNM----------------KKT-----PRGSSFDVLLKQLVLN 1141 (1267)
Q Consensus 1084 LFGg~LrSqV~C~~Cg~~S~t-~pf~~l~l~I~as~l~~~----------------k~~-----~~~~SF~~lLk~~~~~ 1141 (1267)
+|+|.++++++|..|+++|.+ ++|.++.++|+.....+. ... .+..+|.++|+.+...
T Consensus 479 lF~G~l~s~i~C~~C~~vs~t~e~F~~LsL~Ip~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~sL~dcL~~f~~~ 558 (854)
T 3ihp_A 479 VFRFLVEEKIKCLATEKVKYTQRVDYIMQLPVPMDAALNKEELLEYEEKKRQAEEEKMALPELVRAQVPFSSCLEAYGAP 558 (854)
T ss_dssp GTCEEEEEEEEETTTTEEEEEEEEESEEEECCCGGGCTTHHHHHHHHHHHHHHHHTTCCCCCCCCEECCHHHHHHHHHSC
T ss_pred hcCceEEEEEEecCCCCEeEEeeeceEEEeeCCccccccccchhhhcccccccccccccccccccCCCCHHHHHHHhcCc
Confidence 999999999999999999987 799999998886432110 000 1125899999987532
Q ss_pred ---CcccCCcCCCccc--eehccccCCcEEEEEeecccc
Q 037237 1142 ---GLLNCGACGQINY--IHHTLWRLPHVFTIGMLRVCN 1175 (1267)
Q Consensus 1142 ---~~~~C~~Cgk~~~--kq~tI~rlP~VLtIhLKRFeh 1175 (1267)
+.|.|++|++++. ++..|.++|+||+||||||..
T Consensus 559 E~Le~y~C~~C~~k~~a~K~~~i~~lP~vLiihLkRF~~ 597 (854)
T 3ihp_A 559 EQVDDFWSTALQAKSVAVKTTRFASFPDYLVIQIKKFTF 597 (854)
T ss_dssp EEEEEEEETTTTEEEEEEEEEEESSCCSEEEEEECCEEE
T ss_pred eEeeeeeccccCCcceeeEEEEeeeCCceEEEEeehhee
Confidence 2499999998864 678899999999999999974
No 11
>2vhf_A Ubiquitin carboxyl-terminal hydrolase CYLD; cytokine signalling, linkage specificity, deubiquitinating enzyme, Lys63- linked, anti-oncogene; 2.8A {Homo sapiens}
Probab=99.83 E-value=1.5e-20 Score=214.58 Aligned_cols=98 Identities=9% Similarity=0.049 Sum_probs=80.7
Q ss_pred hhhhccCCCCCCcchHHHHHHHhhCcHHHHHHHhccCccccCCCCCC---cHHHHH-HHHHHHHhcccCCCCccccccch
Q 037237 941 LEYWRQFENGTTDSFVNMIVKSLWHLREFREEFMRRRQTIHNHIGDP---CIVCAL-YDMFAALSTACEDNQVEVPSAPS 1016 (1267)
Q Consensus 941 l~~gL~N~~GgNTCFLNSILQcL~H~p~fRe~fLs~~~~~h~~~~~~---CV~CAL-~~LFsal~~ss~~~~~e~~vsPs 1016 (1267)
.++||+|. ||||||||+||||..+|.+++.++.... .... .+ -+..+| +++|..|.. . ++.|.
T Consensus 8 ~p~GLqNl--gNTCYLNSTLq~Lfsipel~d~Ll~~~~--~~~~-~~~~~~l~~~L~r~i~~~Lrk--~------~~~P~ 74 (374)
T 2vhf_A 8 KKKGIQGH--YNSCYLDSTLFCLFAFSSVLDTVLLRPK--EKND-VEYYSETQELLRTEIVNPLRI--Y------GYVCA 74 (374)
T ss_dssp ESCEECCC--SSCHHHHHHHHHHHSSBGGGHHHHHCCC--CTTS-CTTHHHHHHHHHHTTHHHHHH--T------SEECH
T ss_pred CCccccCC--CcCcHHHHHHHHHHhchHHHHHHHhCCC--CCCc-chhHHHHHHHHHHHHHHHHhh--c------CCCcH
Confidence 46899996 9999999999999999999999997532 2222 22 488899 899999985 1 69999
Q ss_pred HHHHHHHhcccchHHHhh-----hhccchHHHHHHHHHHHhhh
Q 037237 1017 SLRVALTTYSYDKNICKQ-----AKMNDSSELLQAILESLHES 1054 (1267)
Q Consensus 1017 ~Lr~aLs~i~~ds~~F~~-----g~QqDAhEfL~~LLd~LH~s 1054 (1267)
.+...|+..+| +|.. +.||||+|||..||..|++.
T Consensus 75 ~~l~~LR~~~p---Qfae~~G~~~~QQDaEE~~t~Ll~~L~~~ 114 (374)
T 2vhf_A 75 TKIMKLRKILE---KVEAASGFTSEEKDPEEFLNILFHHILRV 114 (374)
T ss_dssp HHHHHHHHHHH---HHC--------CCCHHHHHHHHHTTTTCC
T ss_pred HHHHHHHHHhH---HHhcccCCCccccCHHHHHHHHHHHHhhc
Confidence 99999999998 7732 46999999999999999886
No 12
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=97.55 E-value=6.3e-05 Score=82.40 Aligned_cols=101 Identities=11% Similarity=0.065 Sum_probs=82.7
Q ss_pred HHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHH
Q 037237 51 NEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFL 130 (1267)
Q Consensus 51 ~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f 130 (1267)
.-...|..+++.|++.+|++..+.++..+|+.+.++...|.++.++. +. +-- +..+++|+.+.|+....-..
T Consensus 6 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~----~~-~~A---~~~~~~al~~~p~~~~~~~~ 77 (281)
T 2c2l_A 6 ELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQ----QP-EQA---LADCRRALELDGQSVKAHFF 77 (281)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHTTSCTTCHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhc----CH-HHH---HHHHHHHHHhCCCCHHHHHH
Confidence 34567888999999999999999999999999999999998888764 22 111 44567799999999998888
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCc
Q 037237 131 HAALLYKLAEINDKEWDVVIEACERMLKIGDPYDT 165 (1267)
Q Consensus 131 ~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp 165 (1267)
.|.+++.+++ |++|+....+|+.+ +|.++
T Consensus 78 lg~~~~~~g~-----~~~A~~~~~~al~l-~p~~~ 106 (281)
T 2c2l_A 78 LGQCQLEMES-----YDEAIANLQRAYSL-AKEQR 106 (281)
T ss_dssp HHHHHHHTTC-----HHHHHHHHHHHHHH-HHHTT
T ss_pred HHHHHHHcCC-----HHHHHHHHHHHHHh-Cccch
Confidence 8999888775 89999999999987 35443
No 13
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=97.28 E-value=0.0005 Score=66.31 Aligned_cols=99 Identities=21% Similarity=0.281 Sum_probs=84.1
Q ss_pred HHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHH
Q 037237 52 EGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLH 131 (1267)
Q Consensus 52 e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~ 131 (1267)
.-+++..+|+.|++.+|++..+..+...|..+.++.--|.+++++..-- .. +..+.+|+.+.|+....-...
T Consensus 16 ~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~-~A-------~~~~~~al~~~p~~~~a~~~l 87 (126)
T 4gco_A 16 EKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQ-RA-------LDDCDTCIRLDSKFIKGYIRK 87 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-HH-------HHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHH-HH-------HHHHHHHHHhhhhhhHHHHHH
Confidence 3467888999999999999999999999999999999999998775221 11 566788999999999988889
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 132 AALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 132 A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
|..++.+++ |++|+...++||.+ +|.+
T Consensus 88 g~~~~~~~~-----~~~A~~~~~~al~l-~P~~ 114 (126)
T 4gco_A 88 AACLVAMRE-----WSKAQRAYEDALQV-DPSN 114 (126)
T ss_dssp HHHHHHTTC-----HHHHHHHHHHHHHH-CTTC
T ss_pred HHHHHHCCC-----HHHHHHHHHHHHHH-CcCC
Confidence 999988886 89999999999998 4654
No 14
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.26 E-value=0.00023 Score=82.44 Aligned_cols=100 Identities=11% Similarity=0.112 Sum_probs=81.7
Q ss_pred HHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHH
Q 037237 52 EGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLH 131 (1267)
Q Consensus 52 e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~ 131 (1267)
-..++.-....|++.+|++..+.++..+|+.+.++...|.++..+.+..+.. +..+++|+.+.|++...-+..
T Consensus 100 ~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eA-------l~~~~~al~l~P~~~~a~~~~ 172 (382)
T 2h6f_A 100 YDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEE-------MNYITAIIEEQPKNYQVWHHR 172 (382)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHH-------HHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHH-------HHHHHHHHHHCCCCHHHHHHH
Confidence 3445556677899999999999999999999999999999998875322222 666788999999999988889
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 132 AALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 132 A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
+.++..+++ |++|+.-+++||.+ +|.+
T Consensus 173 g~~~~~~g~-----~~eAl~~~~kal~l-dP~~ 199 (382)
T 2h6f_A 173 RVLVEWLRD-----PSQELEFIADILNQ-DAKN 199 (382)
T ss_dssp HHHHHHHTC-----CTTHHHHHHHHHHH-CTTC
T ss_pred HHHHHHccC-----HHHHHHHHHHHHHh-CccC
Confidence 999888875 68999999999988 4554
No 15
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=97.14 E-value=0.0012 Score=63.17 Aligned_cols=99 Identities=9% Similarity=-0.018 Sum_probs=80.8
Q ss_pred HHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHH
Q 037237 52 EGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLH 131 (1267)
Q Consensus 52 e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~ 131 (1267)
..+.|..+++.|++.+|+..++..+..+|+++.+++.-|.++..+..- +.. +..+++|+.+.|+....-...
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~-~~A-------~~~~~~al~l~P~~~~~~~~l 91 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKD-GLA-------IIALNHARMLDPKDIAVHAAL 91 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCH-HHH-------HHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCH-HHH-------HHHHHHHHHhCCCCHHHHHHH
Confidence 467888999999999999999999999999999999999998876421 111 556788999999999988888
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 132 AALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 132 A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
|.+++.+|+ |++|+...++++.+ +|.+
T Consensus 92 a~~~~~~g~-----~~~A~~~~~~al~~-~P~~ 118 (121)
T 1hxi_A 92 AVSHTNEHN-----ANAALASLRAWLLS-QPQY 118 (121)
T ss_dssp HHHHHHHHH-----HHHHHHHHHHHHC------
T ss_pred HHHHHHcCC-----HHHHHHHHHHHHHh-CcCC
Confidence 998888876 79999999999987 4543
No 16
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=96.96 E-value=0.004 Score=60.26 Aligned_cols=106 Identities=10% Similarity=0.003 Sum_probs=86.7
Q ss_pred hhHHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhh
Q 037237 47 PEINNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVE 126 (1267)
Q Consensus 47 ~~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~ 126 (1267)
.....-...|...++.|++.+|++..+.++..+|..+.++..-|.++..+. +. +-- +..+.+|+.+.|++..
T Consensus 16 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g----~~-~~A---~~~~~~al~~~p~~~~ 87 (142)
T 2xcb_A 16 DTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLG----LY-EQA---LQSYSYGALMDINEPR 87 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCTH
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHh----hH-HHH---HHHHHHHHhcCCCCcH
Confidence 345556678999999999999999999999999999999999999887654 21 111 5557789999999999
Q ss_pred hHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCcc
Q 037237 127 LSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYDTL 166 (1267)
Q Consensus 127 ~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp~ 166 (1267)
.....|..++.+|+ |++|+...++++.+ +|.+|.
T Consensus 88 ~~~~lg~~~~~~g~-----~~~A~~~~~~al~~-~p~~~~ 121 (142)
T 2xcb_A 88 FPFHAAECHLQLGD-----LDGAESGFYSARAL-AAAQPA 121 (142)
T ss_dssp HHHHHHHHHHHTTC-----HHHHHHHHHHHHHH-HHTCGG
T ss_pred HHHHHHHHHHHcCC-----HHHHHHHHHHHHHh-CCCCcc
Confidence 98899999998886 79999999999988 355443
No 17
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=96.94 E-value=0.0038 Score=61.71 Aligned_cols=106 Identities=8% Similarity=-0.022 Sum_probs=87.2
Q ss_pred hhHHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhh
Q 037237 47 PEINNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVE 126 (1267)
Q Consensus 47 ~~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~ 126 (1267)
..+..-...|..+++.|++.+|+...+.++...|..+.++..-|.++..+..- +.. +..+++|+.+.|++..
T Consensus 19 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~-~~A-------~~~~~~al~l~p~~~~ 90 (148)
T 2vgx_A 19 DTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQY-DLA-------IHSYSYGAVMDIXEPR 90 (148)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH-HHH-------HHHHHHHHHHSTTCTH
T ss_pred hhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhH-HHH-------HHHHHHHHhcCCCCch
Confidence 45556677899999999999999999999999999999999999988776422 111 5667889999999999
Q ss_pred hHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCcc
Q 037237 127 LSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYDTL 166 (1267)
Q Consensus 127 ~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp~ 166 (1267)
.-...|..++.+|+ |++|+...++++.+ +|.+|.
T Consensus 91 ~~~~lg~~~~~~g~-----~~~A~~~~~~al~~-~p~~~~ 124 (148)
T 2vgx_A 91 FPFHAAECLLQXGE-----LAEAESGLFLAQEL-IANXPE 124 (148)
T ss_dssp HHHHHHHHHHHTTC-----HHHHHHHHHHHHHH-HTTCGG
T ss_pred HHHHHHHHHHHcCC-----HHHHHHHHHHHHHH-CcCCCc
Confidence 88889999998886 79999999999988 354443
No 18
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=96.71 E-value=0.0044 Score=62.35 Aligned_cols=101 Identities=12% Similarity=-0.085 Sum_probs=87.0
Q ss_pred hhHHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhh
Q 037237 47 PEINNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVE 126 (1267)
Q Consensus 47 ~~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~ 126 (1267)
..+..-...|..+++.|++.+|++..+.++..+|+.+.++..-|.++..+.+- +.. +..+++|+.+.|++..
T Consensus 34 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~-~~A-------i~~~~~al~l~P~~~~ 105 (151)
T 3gyz_A 34 DMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQF-QQA-------ADLYAVAFALGKNDYT 105 (151)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH-HHH-------HHHHHHHHHHSSSCCH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccH-HHH-------HHHHHHHHhhCCCCcH
Confidence 44556678889999999999999999999999999999999999998876522 122 6778899999999999
Q ss_pred hHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccC
Q 037237 127 LSFLHAALLYKLAEINDKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 127 ~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~ 160 (1267)
.-...|..++.+|+ |++|+...++|+.+.
T Consensus 106 ~~~~lg~~~~~lg~-----~~eA~~~~~~al~l~ 134 (151)
T 3gyz_A 106 PVFHTGQCQLRLKA-----PLKAKECFELVIQHS 134 (151)
T ss_dssp HHHHHHHHHHHTTC-----HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCC-----HHHHHHHHHHHHHhC
Confidence 98899999999886 799999999999984
No 19
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=96.67 E-value=0.0051 Score=60.63 Aligned_cols=105 Identities=15% Similarity=0.123 Sum_probs=87.1
Q ss_pred hhHHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhh
Q 037237 47 PEINNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVE 126 (1267)
Q Consensus 47 ~~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~ 126 (1267)
.....-...|..+++.|++.+|++..+..+..+|..+.++...|.+++.+..- +.. +..+.+|+.+.|+...
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~-~~A-------~~~~~~al~~~p~~~~ 80 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQH-EKA-------AEDAELATVVDPKYSK 80 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCH-HHH-------HHHHHHHHHHCTTCHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCH-HHH-------HHHHHHHHHhCCCCHH
Confidence 45566778899999999999999999999999999999999999998876421 111 5556779999999998
Q ss_pred hHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCc
Q 037237 127 LSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYDT 165 (1267)
Q Consensus 127 ~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp 165 (1267)
.-...|.+++.+++ |++|+...+++|.+ +|.++
T Consensus 81 ~~~~lg~~~~~~g~-----~~~A~~~~~~al~~-~p~~~ 113 (164)
T 3sz7_A 81 AWSRLGLARFDMAD-----YKGAKEAYEKGIEA-EGNGG 113 (164)
T ss_dssp HHHHHHHHHHHTTC-----HHHHHHHHHHHHHH-HSSSC
T ss_pred HHHHHHHHHHHccC-----HHHHHHHHHHHHHh-CCCch
Confidence 88888999888875 79999999999998 45543
No 20
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=96.59 E-value=0.0057 Score=56.39 Aligned_cols=100 Identities=16% Similarity=0.166 Sum_probs=79.3
Q ss_pred hhHHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhh
Q 037237 47 PEINNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVE 126 (1267)
Q Consensus 47 ~~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~ 126 (1267)
....+-...|..+++.|++.+|++.++.++...|..+.++...|.++..+. +. +-- +..+.+|+.+.|+...
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~----~~-~~A---~~~~~~a~~~~~~~~~ 85 (133)
T 2lni_A 14 DLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLL----EF-QLA---LKDCEECIQLEPTFIK 85 (133)
T ss_dssp CHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTT----CH-HHH---HHHHHHHHHHCTTCHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhc----cH-HHH---HHHHHHHHHhCCCchH
Confidence 456677788999999999999999999999888888877777777765432 22 111 3445678899999988
Q ss_pred hHHHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 127 LSFLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 127 ~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
.-...|.+++.+++ |++|+.-.++++.+
T Consensus 86 ~~~~la~~~~~~~~-----~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 86 GYTRKAAALEAMKD-----YTKAMDVYQKALDL 113 (133)
T ss_dssp HHHHHHHHHHHTTC-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh-----HHHHHHHHHHHHHh
Confidence 88888888888775 79999999999987
No 21
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=96.53 E-value=0.0053 Score=57.48 Aligned_cols=96 Identities=16% Similarity=0.144 Sum_probs=81.3
Q ss_pred HHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHH
Q 037237 51 NEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFL 130 (1267)
Q Consensus 51 ~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f 130 (1267)
.-.++|..+++.|++.+|+...+..+...|..+.++...|.+++++..- +.. +..+.+|+.+.|+....-..
T Consensus 6 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~-~~A-------~~~~~~al~~~p~~~~~~~~ 77 (126)
T 3upv_A 6 EARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSF-PEA-------IADCNKAIEKDPNFVRAYIR 77 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH-HHH-------HHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCH-HHH-------HHHHHHHHHhCCCcHHHHHH
Confidence 3456788899999999999999999999999999999999998876421 111 55577899999999988888
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 131 HAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 131 ~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
.|.+++.+++ |++|+...++++.+
T Consensus 78 lg~~~~~~~~-----~~~A~~~~~~al~~ 101 (126)
T 3upv_A 78 KATAQIAVKE-----YASALETLDAARTK 101 (126)
T ss_dssp HHHHHHHTTC-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhC-----HHHHHHHHHHHHHh
Confidence 9999888875 79999999999998
No 22
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=96.52 E-value=0.0024 Score=63.08 Aligned_cols=99 Identities=19% Similarity=0.126 Sum_probs=78.6
Q ss_pred HHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHH
Q 037237 54 LRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAA 133 (1267)
Q Consensus 54 ~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~ 133 (1267)
.-|.-+++.|++.+|++..+..+..+|+.+.+|..-|.++..+. +. +-- +..+++|+.+.|++...-...|.
T Consensus 36 ~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~----~~-~~A---~~~~~~al~~~p~~~~~~~~la~ 107 (150)
T 4ga2_A 36 YFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEE----NT-DKA---VECYRRSVELNPTQKDLVLKIAE 107 (150)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC----ch-HHH---HHHHHHHHHhCCCCHHHHHHHHH
Confidence 44666789999999999999999999999999999999998764 22 111 55577899999999998888899
Q ss_pred HHHHHHhhhchhHHHHHHH-HHHHhccCCCCCcc
Q 037237 134 LLYKLAEINDKEWDVVIEA-CERMLKIGDPYDTL 166 (1267)
Q Consensus 134 lL~~la~~~~~~Y~~a~~e-c~RaL~i~~P~dp~ 166 (1267)
+++.+++ |++++.. .++|+.+ +|.+|.
T Consensus 108 ~~~~~~~-----~~~aa~~~~~~al~l-~P~~~~ 135 (150)
T 4ga2_A 108 LLCKNDV-----TDGRAKYWVERAAKL-FPGSPA 135 (150)
T ss_dssp HHHHHCS-----SSSHHHHHHHHHHHH-STTCHH
T ss_pred HHHHcCC-----hHHHHHHHHHHHHHh-CcCCHH
Confidence 9888876 4555555 5888888 566543
No 23
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.43 E-value=0.019 Score=53.92 Aligned_cols=103 Identities=20% Similarity=0.227 Sum_probs=79.5
Q ss_pred hHHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCC---chhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCch
Q 037237 48 EINNEGLRALSAFQSGDSKKALEMIKESISSHQDS---PHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNL 124 (1267)
Q Consensus 48 ~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s---~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s 124 (1267)
.+..-...|..++..|++.+|++..++++...|+. +.++...|.+++.+. +. +-- +..+.+++.+.|+.
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~----~~-~~A---~~~~~~~~~~~~~~ 98 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLE----DY-DKA---ETEASKAIEKDGGD 98 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHc----cH-HHH---HHHHHHHHhhCccC
Confidence 34556678999999999999999999999888876 666776777665543 22 111 44466788999999
Q ss_pred hhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 125 VELSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 125 ~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
...-...|.+++.+++ |++|+...++++.+ +|.+
T Consensus 99 ~~~~~~~a~~~~~~~~-----~~~A~~~~~~al~~-~p~~ 132 (148)
T 2dba_A 99 VKALYRRSQALEKLGR-----LDQAVLDLQRCVSL-EPKN 132 (148)
T ss_dssp HHHHHHHHHHHHHHTC-----HHHHHHHHHHHHHH-CSSC
T ss_pred HHHHHHHHHHHHHcCC-----HHHHHHHHHHHHHc-CCCc
Confidence 8888888998888775 79999999999988 4544
No 24
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=96.37 E-value=0.016 Score=51.87 Aligned_cols=102 Identities=17% Similarity=0.096 Sum_probs=81.7
Q ss_pred HHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhH
Q 037237 49 INNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELS 128 (1267)
Q Consensus 49 i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a 128 (1267)
+..-...|..++..|++.+|++..+..+...|..+.++...|.++..+. +. +.- +..+.+++.+.|+....-
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~----~~-~~A---~~~~~~~~~~~~~~~~~~ 75 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKG----DY-QKA---YEDGCKTVDLKPDWGKGY 75 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT----CH-HHH---HHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhc----cH-HHH---HHHHHHHHHhCcccHHHH
Confidence 3455677888999999999999999999999999999988898887653 22 111 444667899999998888
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 129 FLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 129 ~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
...|..++.+++ |++|+...++++.+ +|.+
T Consensus 76 ~~~a~~~~~~~~-----~~~A~~~~~~~~~~-~~~~ 105 (118)
T 1elw_A 76 SRKAAALEFLNR-----FEEAKRTYEEGLKH-EANN 105 (118)
T ss_dssp HHHHHHHHHTTC-----HHHHHHHHHHHHTT-CTTC
T ss_pred HHHHHHHHHHhh-----HHHHHHHHHHHHHc-CCCC
Confidence 888888888775 79999999999987 3544
No 25
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=96.30 E-value=0.0056 Score=63.42 Aligned_cols=104 Identities=13% Similarity=0.132 Sum_probs=83.6
Q ss_pred HHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhh----------------hhHHHHHHHHHhCCCcchhhhhhh
Q 037237 49 INNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCL----------------EAFIHHSLAEKAGKGTDTQLEHLT 112 (1267)
Q Consensus 49 i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~----------------qg~v~~~lA~~~~~~~~~k~~~l~ 112 (1267)
+..-..+|..+++.|++.+|+...+.++..+|+.+.+++. -|.++.++. +. +-- +.
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g----~~-~~A---~~ 75 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNR----NY-DKA---YL 75 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTT----CH-HHH---HH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCC----CH-HHH---HH
Confidence 3445678999999999999999999999999988888877 666665543 21 111 55
Q ss_pred hhhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCcc
Q 037237 113 TAASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYDTL 166 (1267)
Q Consensus 113 ~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp~ 166 (1267)
.+.+|+.+.|++...-...|.+++.+|+ |++|+.-.+++|.+ +|.++.
T Consensus 76 ~~~~al~~~p~~~~~~~~lg~~~~~~g~-----~~~A~~~~~~al~~-~P~~~~ 123 (208)
T 3urz_A 76 FYKELLQKAPNNVDCLEACAEMQVCRGQ-----EKDALRMYEKILQL-EADNLA 123 (208)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHTC-----HHHHHHHHHHHHHH-CTTCHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHcCC-----HHHHHHHHHHHHHc-CCCCHH
Confidence 5678999999999998899999998886 79999999999998 566543
No 26
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=96.13 E-value=0.013 Score=57.49 Aligned_cols=104 Identities=13% Similarity=0.082 Sum_probs=80.5
Q ss_pred hhHHHHHHHHHhHhhcCCHHHHHHHHHHHHhh------------------CCCCchhhhhhhHHHHHHHHHhCCCcchhh
Q 037237 47 PEINNEGLRALSAFQSGDSKKALEMIKESISS------------------HQDSPHLHCLEAFIHHSLAEKAGKGTDTQL 108 (1267)
Q Consensus 47 ~~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~------------------h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~ 108 (1267)
..+..-.+++..+|+.|++.+|++..+..+.. .|..+.+|.--|.+++++. +. +--
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~----~~-~~A- 82 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIG----DL-HEA- 82 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHT----CH-HHH-
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC----cH-HHH-
Confidence 44556678889999999999999999999976 4445566666676666554 21 111
Q ss_pred hhhhhhhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 109 EHLTTAASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 109 ~~l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
+..+.+|+.+.|+....-...|..++.+++ |++|+...++||.+ +|.+
T Consensus 83 --~~~~~~al~~~p~~~~a~~~~g~~~~~~g~-----~~~A~~~~~~al~l-~p~~ 130 (162)
T 3rkv_A 83 --EETSSEVLKREETNEKALFRRAKARIAAWK-----LDEAEEDLKLLLRN-HPAA 130 (162)
T ss_dssp --HHHHHHHHHHSTTCHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHH-CGGG
T ss_pred --HHHHHHHHhcCCcchHHHHHHHHHHHHHhc-----HHHHHHHHHHHHhc-CCCC
Confidence 555778999999999988889999998886 89999999999999 4544
No 27
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=96.07 E-value=0.015 Score=53.82 Aligned_cols=98 Identities=9% Similarity=-0.029 Sum_probs=75.9
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCc---hhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCch---hh
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSP---HLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNL---VE 126 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~---~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s---~~ 126 (1267)
...|...++.|++.+|++.++.++..+|+++ .++..-|.+++.+. +. +-- +..+.+++..+|++ ..
T Consensus 6 ~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~----~~-~~A---~~~~~~~~~~~p~~~~~~~ 77 (129)
T 2xev_A 6 YNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATR----NF-QLA---EAQFRDLVSRYPTHDKAAG 77 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTSTTHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhc----cH-HHH---HHHHHHHHHHCCCCcccHH
Confidence 4678899999999999999999999999887 57888888877653 22 111 44466789999999 55
Q ss_pred hHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 127 LSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 127 ~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
.-...|.+++.+|+ |++|+...++++.. .|.+
T Consensus 78 ~~~~la~~~~~~g~-----~~~A~~~~~~~~~~-~p~~ 109 (129)
T 2xev_A 78 GLLKLGLSQYGEGK-----NTEAQQTLQQVATQ-YPGS 109 (129)
T ss_dssp HHHHHHHHHHHTTC-----HHHHHHHHHHHHHH-STTS
T ss_pred HHHHHHHHHHHcCC-----HHHHHHHHHHHHHH-CCCC
Confidence 56677888777765 79999999999887 3554
No 28
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=96.06 E-value=0.0094 Score=61.73 Aligned_cols=98 Identities=10% Similarity=0.068 Sum_probs=79.3
Q ss_pred hHHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhh
Q 037237 48 EINNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVEL 127 (1267)
Q Consensus 48 ~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~ 127 (1267)
.+..-...|..++..|++.+|++.++.++...|..+.++...|.++.... +. +-- +..+.+|+.+.|+....
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~----~~-~~A---~~~~~~a~~~~~~~~~~ 107 (252)
T 2ho1_A 36 ARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEM----EP-KLA---DEEYRKALASDSRNARV 107 (252)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcC----CH-HHH---HHHHHHHHHHCcCcHHH
Confidence 36677788889999999999999999999999988888888888887643 32 211 34456688899998888
Q ss_pred HHHHHHHHHHHHhhhchhHHHHHHHHHHHhc
Q 037237 128 SFLHAALLYKLAEINDKEWDVVIEACERMLK 158 (1267)
Q Consensus 128 a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~ 158 (1267)
....|.+++.+++ |++|+.-.++++.
T Consensus 108 ~~~la~~~~~~g~-----~~~A~~~~~~~~~ 133 (252)
T 2ho1_A 108 LNNYGGFLYEQKR-----YEEAYQRLLEASQ 133 (252)
T ss_dssp HHHHHHHHHHTTC-----HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhH-----HHHHHHHHHHHHh
Confidence 7788888877664 8999999999988
No 29
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=95.94 E-value=0.017 Score=54.20 Aligned_cols=98 Identities=11% Similarity=0.077 Sum_probs=81.3
Q ss_pred HHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhH
Q 037237 49 INNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELS 128 (1267)
Q Consensus 49 i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a 128 (1267)
...-...|..++..|++.+|+...+.++..+|..+.++..-|.+++.+. +. +-- +..+.+|+.+.|+....-
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~----~~-~~A---~~~~~~al~~~p~~~~~~ 80 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQ----QP-EQA---LADCRRALELDGQSVKAH 80 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhc----CH-HHH---HHHHHHHHHhCchhHHHH
Confidence 3445678888999999999999999999999999999999999888754 22 111 445677999999999888
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 129 FLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 129 ~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
...|.+++.+++ |++|+...++++.+
T Consensus 81 ~~l~~~~~~~~~-----~~~A~~~~~~a~~~ 106 (137)
T 3q49_B 81 FFLGQCQLEMES-----YDEAIANLQRAYSL 106 (137)
T ss_dssp HHHHHHHHHTTC-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-----HHHHHHHHHHHHHH
Confidence 888998888775 79999999999988
No 30
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=95.85 E-value=0.019 Score=59.82 Aligned_cols=100 Identities=12% Similarity=0.139 Sum_probs=83.5
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHH
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHA 132 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A 132 (1267)
...+...++.|++.+|+..++..+...|+.+.++..-|.++..+..-- .. +..+++|+.+.|+....-...|
T Consensus 9 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~-~A-------~~~~~~al~~~P~~~~a~~~lg 80 (217)
T 2pl2_A 9 LRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVN-PA-------LENGKTLVARTPRYLGGYMVLS 80 (217)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHH-HH-------HHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH-HH-------HHHHHHHHHhCCCcHHHHHHHH
Confidence 466788899999999999999999999999999999999988764221 11 5557789999999999888899
Q ss_pred HHHHHH-----------HhhhchhHHHHHHHHHHHhccCCCCCcc
Q 037237 133 ALLYKL-----------AEINDKEWDVVIEACERMLKIGDPYDTL 166 (1267)
Q Consensus 133 ~lL~~l-----------a~~~~~~Y~~a~~ec~RaL~i~~P~dp~ 166 (1267)
.++..+ |+ |++|+...++|+.+ +|.++.
T Consensus 81 ~~~~~~~~~~~~~~~~~g~-----~~~A~~~~~~al~~-~P~~~~ 119 (217)
T 2pl2_A 81 EAYVALYRQAEDRERGKGY-----LEQALSVLKDAERV-NPRYAP 119 (217)
T ss_dssp HHHHHHHHTCSSHHHHHHH-----HHHHHHHHHHHHHH-CTTCHH
T ss_pred HHHHHhhhhhhhhcccccC-----HHHHHHHHHHHHHh-CcccHH
Confidence 998888 54 89999999999998 576543
No 31
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=95.66 E-value=0.036 Score=57.24 Aligned_cols=80 Identities=14% Similarity=0.042 Sum_probs=63.3
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHH
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHA 132 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A 132 (1267)
...|.-.++.|++.+|+...+..+..+|+.+.++..-|.++..+..-- .. +..+++|+.+.|+....-...+
T Consensus 58 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~-~A-------~~~~~~al~~~P~~~~a~~~lg 129 (208)
T 3urz_A 58 TELALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEK-DA-------LRMYEKILQLEADNLAANIFLG 129 (208)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHH-HH-------HHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHH-HH-------HHHHHHHHHcCCCCHHHHHHHH
Confidence 447888899999999999999999999999999999999988765221 11 4556778888998887777777
Q ss_pred HHHHHHHh
Q 037237 133 ALLYKLAE 140 (1267)
Q Consensus 133 ~lL~~la~ 140 (1267)
.++|..|.
T Consensus 130 ~~~~~~~~ 137 (208)
T 3urz_A 130 NYYYLTAE 137 (208)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhH
Confidence 77766653
No 32
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=95.64 E-value=0.033 Score=50.51 Aligned_cols=104 Identities=13% Similarity=0.099 Sum_probs=81.5
Q ss_pred hhHHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhh
Q 037237 47 PEINNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVE 126 (1267)
Q Consensus 47 ~~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~ 126 (1267)
..+..-...|..++..|++.+|++.++..+..+|..+.++..-|.++..+. +. +.- +..+.+++.+.|+...
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~----~~-~~A---~~~~~~~~~~~~~~~~ 81 (131)
T 2vyi_A 10 AEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLG----NY-AGA---VQDCERAICIDPAYSK 81 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHH
T ss_pred hhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhh----ch-HHH---HHHHHHHHhcCccCHH
Confidence 455666778889999999999999999999999988888888888876643 22 111 4445668889999988
Q ss_pred hHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 127 LSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 127 ~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
.-...|.+++.+++ |++|+.-.++++.+ +|.+
T Consensus 82 ~~~~~~~~~~~~~~-----~~~A~~~~~~~~~~-~p~~ 113 (131)
T 2vyi_A 82 AYGRMGLALSSLNK-----HVEAVAYYKKALEL-DPDN 113 (131)
T ss_dssp HHHHHHHHHHHTTC-----HHHHHHHHHHHHHH-STTC
T ss_pred HHHHHHHHHHHhCC-----HHHHHHHHHHHHhc-Cccc
Confidence 77788888777664 89999999999988 3543
No 33
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=95.56 E-value=0.039 Score=57.36 Aligned_cols=103 Identities=16% Similarity=0.010 Sum_probs=83.5
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhh---hhhhhhhhccCCchhhhHH
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEH---LTTAASAVGRFPNLVELSF 129 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~---l~~~~~Av~l~p~s~~~a~ 129 (1267)
...|.-.++.|++.+|+..++..+...|+.+.++..-|.++..+....++....+-.| +..+++|+.+.|++...-.
T Consensus 43 ~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~ 122 (217)
T 2pl2_A 43 YWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHL 122 (217)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHH
Confidence 4566777889999999999999999999999999999999998843322210011122 6667889999999999888
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHHHhccC
Q 037237 130 LHAALLYKLAEINDKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 130 f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~ 160 (1267)
..|.+++.+|+ |++|+...++|+.+.
T Consensus 123 ~lg~~~~~~g~-----~~~A~~~~~~al~~~ 148 (217)
T 2pl2_A 123 QRGLVYALLGE-----RDKAEASLKQALALE 148 (217)
T ss_dssp HHHHHHHHTTC-----HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCC-----hHHHHHHHHHHHhcc
Confidence 99999888876 799999999999996
No 34
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=95.54 E-value=0.04 Score=52.76 Aligned_cols=103 Identities=15% Similarity=0.139 Sum_probs=82.0
Q ss_pred hHHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhh
Q 037237 48 EINNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVEL 127 (1267)
Q Consensus 48 ~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~ 127 (1267)
....-...|..++..|++.+|++..+.++..+|..+.++...|.++..+. +. +-- +..+.+|+.+.|+....
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~----~~-~~A---~~~~~~a~~~~~~~~~~ 83 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTE----CY-GYA---LGDATRAIELDKKYIKG 83 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcC----CH-HHH---HHHHHHHHHhCcccHHH
Confidence 44555677888999999999999999999999998888888888877653 22 111 44466789999999888
Q ss_pred HHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 128 SFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 128 a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
-...|.+++.+++ |++|+...++++.+ +|.+
T Consensus 84 ~~~~a~~~~~~~~-----~~~A~~~~~~a~~~-~p~~ 114 (166)
T 1a17_A 84 YYRRAASNMALGK-----FRAALRDYETVVKV-KPHD 114 (166)
T ss_dssp HHHHHHHHHHTTC-----HHHHHHHHHHHHHH-STTC
T ss_pred HHHHHHHHHHhcc-----HHHHHHHHHHHHHh-CCCC
Confidence 8888888888775 89999999999988 4544
No 35
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=95.52 E-value=0.042 Score=55.77 Aligned_cols=103 Identities=10% Similarity=-0.004 Sum_probs=77.3
Q ss_pred hHHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCc----------------hhhhhhhHHHHHHHHHhCCCcchhhhhh
Q 037237 48 EINNEGLRALSAFQSGDSKKALEMIKESISSHQDSP----------------HLHCLEAFIHHSLAEKAGKGTDTQLEHL 111 (1267)
Q Consensus 48 ~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~----------------~~h~~qg~v~~~lA~~~~~~~~~k~~~l 111 (1267)
.+..-...|..+++.|++.+|++..+..+...|..+ .++..-|.+++.+. +. +-- +
T Consensus 37 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~----~~-~~A---~ 108 (198)
T 2fbn_A 37 SAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNK----DY-PKA---I 108 (198)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTT----CH-HHH---H
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhc----CH-HHH---H
Confidence 444556778889999999999999999998777665 45555555554432 21 111 4
Q ss_pred hhhhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 112 TTAASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 112 ~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
..+.+|+.+.|+....-...|.+++.+++ |++|+...++|+.+ +|.+
T Consensus 109 ~~~~~al~~~p~~~~~~~~lg~~~~~~~~-----~~~A~~~~~~al~~-~p~~ 155 (198)
T 2fbn_A 109 DHASKVLKIDKNNVKALYKLGVANMYFGF-----LEEAKENLYKAASL-NPNN 155 (198)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHHTC-----HHHHHHHHHHHHHH-STTC
T ss_pred HHHHHHHHhCcccHHHHHHHHHHHHHccc-----HHHHHHHHHHHHHH-CCCc
Confidence 55677999999999888888999888775 89999999999998 4544
No 36
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=95.43 E-value=0.048 Score=49.02 Aligned_cols=101 Identities=17% Similarity=0.177 Sum_probs=77.1
Q ss_pred HHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHH
Q 037237 50 NNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSF 129 (1267)
Q Consensus 50 ~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~ 129 (1267)
..-...|...++.|++.+|++.+++.+...|..+.++..-|.++.... +. +.- +..+++++...|++.....
T Consensus 10 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~----~~-~~A---~~~~~~~~~~~~~~~~~~~ 81 (125)
T 1na0_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQG----DY-DEA---IEYYQKALELDPNNAEAWY 81 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhC----CH-HHH---HHHHHHHHHhCCccHHHHH
Confidence 344566778889999999999999999988988888887777776543 22 111 3345668888999988777
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 130 LHAALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 130 f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
..|.+++.+++ |++|+.-.++++.+ +|.+
T Consensus 82 ~la~~~~~~~~-----~~~A~~~~~~~~~~-~~~~ 110 (125)
T 1na0_A 82 NLGNAYYKQGD-----YDEAIEYYQKALEL-DPNN 110 (125)
T ss_dssp HHHHHHHHTTC-----HHHHHHHHHHHHHH-CTTC
T ss_pred HHHHHHHHhcC-----HHHHHHHHHHHHHh-CCCc
Confidence 88888887664 79999999999987 3544
No 37
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=95.37 E-value=0.083 Score=52.27 Aligned_cols=106 Identities=12% Similarity=0.051 Sum_probs=76.8
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHH------------HHhCCCcchhhh-----------
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLA------------EKAGKGTDTQLE----------- 109 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA------------~~~~~~~~~k~~----------- 109 (1267)
...+...++.|++.+|++..+..+..+|+.+.++..-|.++.++. ...... .....
T Consensus 9 ~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 87 (184)
T 3vtx_A 9 MDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT-SAEAYYILGSANFMID 87 (184)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHcC
Confidence 345566677888888888888888888888888877777776542 111111 11111
Q ss_pred -h---hhhhhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCc
Q 037237 110 -H---LTTAASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYDT 165 (1267)
Q Consensus 110 -~---l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp 165 (1267)
| +....+|..+.|+........|.+++.+++ |++|+...++++.+ +|.++
T Consensus 88 ~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~-----~~~A~~~~~~~l~~-~p~~~ 141 (184)
T 3vtx_A 88 EKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGE-----HDKAIEAYEKTISI-KPGFI 141 (184)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHH-CTTCH
T ss_pred CHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCC-----chhHHHHHHHHHHh-cchhh
Confidence 1 445778999999999998899999888875 89999999999998 46543
No 38
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=95.24 E-value=0.038 Score=54.67 Aligned_cols=101 Identities=12% Similarity=0.099 Sum_probs=77.7
Q ss_pred HHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHH-HHHHHHH-hCCCcchhhhhhhhhhhhhccCCchhhhHH
Q 037237 52 EGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFI-HHSLAEK-AGKGTDTQLEHLTTAASAVGRFPNLVELSF 129 (1267)
Q Consensus 52 e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v-~~~lA~~-~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~ 129 (1267)
-...|.-++..|++.+|++.++.++...|..+.++..-|.+ ++....- ++.. +..+.+|+.+.|++...-.
T Consensus 47 ~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A-------~~~~~~al~~~p~~~~~~~ 119 (177)
T 2e2e_A 47 WALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQT-------RAMIDKALALDSNEITALM 119 (177)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHH-------HHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHH-------HHHHHHHHHhCCCcHHHHH
Confidence 34566777899999999999999999899888888888877 4443211 0111 3445668999999998888
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCc
Q 037237 130 LHAALLYKLAEINDKEWDVVIEACERMLKIGDPYDT 165 (1267)
Q Consensus 130 f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp 165 (1267)
..|.+++.+++ |++|+...++++.+ +|.++
T Consensus 120 ~la~~~~~~g~-----~~~A~~~~~~al~~-~p~~~ 149 (177)
T 2e2e_A 120 LLASDAFMQAN-----YAQAIELWQKVMDL-NSPRI 149 (177)
T ss_dssp HHHHHHHHTTC-----HHHHHHHHHHHHHT-CCTTS
T ss_pred HHHHHHHHccc-----HHHHHHHHHHHHhh-CCCCc
Confidence 88888888775 89999999999998 45543
No 39
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=95.18 E-value=0.032 Score=53.40 Aligned_cols=98 Identities=12% Similarity=-0.003 Sum_probs=79.5
Q ss_pred HHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHH
Q 037237 54 LRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAA 133 (1267)
Q Consensus 54 ~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~ 133 (1267)
+..-.+++.|++.+|++..+..+..+|..+.++.--|.+++++..- +.. +..+.+|+++.|+........|.
T Consensus 13 ~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~-~~A-------~~~~~~al~~~~~~~~~~~~~a~ 84 (127)
T 4gcn_A 13 DLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKF-AEC-------VQFCEKAVEVGRETRADYKLIAK 84 (127)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH-HHH-------HHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhH-HHH-------HHHHHHHHHhCcccchhhHHHHH
Confidence 3455689999999999999999999999999999999998876521 111 55577899999998877778888
Q ss_pred HHHHHHhhhc--hhHHHHHHHHHHHhcc
Q 037237 134 LLYKLAEIND--KEWDVVIEACERMLKI 159 (1267)
Q Consensus 134 lL~~la~~~~--~~Y~~a~~ec~RaL~i 159 (1267)
+++.+|.-.. ..|++|+.-.++||.+
T Consensus 85 ~~~~lg~~~~~~~~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 85 AMSRAGNAFQKQNDLSLAVQWFHRSLSE 112 (127)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 8888886442 2799999999999986
No 40
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=94.90 E-value=0.06 Score=55.35 Aligned_cols=102 Identities=13% Similarity=0.018 Sum_probs=81.9
Q ss_pred HHHHHHHHhHhhcCCHHHHHHHHHHHHhhCC-CCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhH
Q 037237 50 NNEGLRALSAFQSGDSKKALEMIKESISSHQ-DSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELS 128 (1267)
Q Consensus 50 ~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~-~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a 128 (1267)
..-..+|...+..|++.+|++..+.++...| ..+.++...|.+++.+. +. +-- +..+.+|+.+.|+....-
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~----~~-~~A---~~~~~~al~~~p~~~~~~ 79 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIK----KY-KEA---ADYFDIAIKKNYNLANAY 79 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHTTCSHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhh----cH-HHH---HHHHHHHHHhCcchHHHH
Confidence 4456788899999999999999999998887 77777777888877654 22 111 444677999999999888
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCc
Q 037237 129 FLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYDT 165 (1267)
Q Consensus 129 ~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp 165 (1267)
...|.+++.+++ |++|+...++++.+ +|.+|
T Consensus 80 ~~l~~~~~~~~~-----~~~A~~~~~~al~~-~p~~~ 110 (228)
T 4i17_A 80 IGKSAAYRDMKN-----NQEYIATLTEGIKA-VPGNA 110 (228)
T ss_dssp HHHHHHHHHTTC-----HHHHHHHHHHHHHH-STTCH
T ss_pred HHHHHHHHHccc-----HHHHHHHHHHHHHH-CCCcH
Confidence 889999888775 89999999999998 46554
No 41
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=94.85 E-value=0.17 Score=55.25 Aligned_cols=106 Identities=16% Similarity=0.139 Sum_probs=82.9
Q ss_pred HHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHH-----h-C-----CCcchhhhh----------
Q 037237 52 EGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEK-----A-G-----KGTDTQLEH---------- 110 (1267)
Q Consensus 52 e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~-----~-~-----~~~~~k~~~---------- 110 (1267)
-.+.|..+++.|++.+|+..++.++..+|+.+.++..-|.++..+.+- . + +| +.-..+
T Consensus 120 ~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p-~~~~~~~~~~~~l~~~ 198 (287)
T 3qou_A 120 XAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQ-DTRYQGLVAQIELLXQ 198 (287)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGC-SHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhc-chHHHHHHHHHHHHhh
Confidence 456788889999999999999999999999999999999988754311 0 0 12 111111
Q ss_pred ------hhhhhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 111 ------LTTAASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 111 ------l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
+..+++|+.+.|++.....-.|.++...|+ |++|+....++|.. +|.+
T Consensus 199 ~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~-----~~~A~~~l~~~l~~-~p~~ 252 (287)
T 3qou_A 199 AADTPEIQQLQQQVAENPEDAALATQLALQLHQVGR-----NEEALELLFGHLRX-DLTA 252 (287)
T ss_dssp HTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHH-CTTG
T ss_pred cccCccHHHHHHHHhcCCccHHHHHHHHHHHHHccc-----HHHHHHHHHHHHhc-cccc
Confidence 345788999999999998899999888775 79999999999998 4553
No 42
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=94.83 E-value=0.056 Score=47.85 Aligned_cols=94 Identities=9% Similarity=0.076 Sum_probs=75.4
Q ss_pred HHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCc--hhhhHHHH
Q 037237 54 LRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPN--LVELSFLH 131 (1267)
Q Consensus 54 ~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~--s~~~a~f~ 131 (1267)
..|...++.|++.+|+...+.++...|..+.++...|.+++.+. +. +-- +..+.+|+.+.|+ ....-...
T Consensus 11 ~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~----~~-~~A---~~~~~~a~~~~~~~~~~~~~~~l 82 (112)
T 2kck_A 11 LEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLE----RY-EEA---VDCYNYVINVIEDEYNKDVWAAK 82 (112)
T ss_dssp GHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHTSCCTTCHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcc----CH-HHH---HHHHHHHHHhCcccchHHHHHHH
Confidence 45677889999999999999999999988888888888877654 21 111 4446779999999 88887888
Q ss_pred HHHHHHH-HhhhchhHHHHHHHHHHHhccC
Q 037237 132 AALLYKL-AEINDKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 132 A~lL~~l-a~~~~~~Y~~a~~ec~RaL~i~ 160 (1267)
|.+++.+ ++ |++|++-..+++...
T Consensus 83 ~~~~~~~~~~-----~~~A~~~~~~~~~~~ 107 (112)
T 2kck_A 83 ADALRYIEGK-----EVEAEIAEARAKLEH 107 (112)
T ss_dssp HHHHTTCSSC-----SHHHHHHHHHHGGGC
T ss_pred HHHHHHHhCC-----HHHHHHHHHHHhhcc
Confidence 8888777 65 699999999998884
No 43
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=94.66 E-value=0.15 Score=53.09 Aligned_cols=110 Identities=17% Similarity=0.195 Sum_probs=74.9
Q ss_pred HHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCch---hhhhhhHHHHHHHHHhCCCc------ch-hhhh---hhhhhh
Q 037237 50 NNEGLRALSAFQSGDSKKALEMIKESISSHQDSPH---LHCLEAFIHHSLAEKAGKGT------DT-QLEH---LTTAAS 116 (1267)
Q Consensus 50 ~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~---~h~~qg~v~~~lA~~~~~~~------~~-k~~~---l~~~~~ 116 (1267)
..-...|...++.|++.+|+...+.++..+|+++. +++..|.+++.++...-+.. .. .-.+ +..+++
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 121 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSK 121 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHH
Confidence 45566788889999999999999999999998775 78888988887542110000 00 0112 556788
Q ss_pred hhccCCchhhhHH-----------------HHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCc
Q 037237 117 AVGRFPNLVELSF-----------------LHAALLYKLAEINDKEWDVVIEACERMLKIGDPYDT 165 (1267)
Q Consensus 117 Av~l~p~s~~~a~-----------------f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp 165 (1267)
++..+|++..... ..|..++..+ .|++|+...++++.. .|.+|
T Consensus 122 ~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~-----~~~~A~~~~~~~l~~-~p~~~ 181 (225)
T 2yhc_A 122 LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERG-----AWVAVVNRVEGMLRD-YPDTQ 181 (225)
T ss_dssp HHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CHHHHHHHHHHHHHH-STTSH
T ss_pred HHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----cHHHHHHHHHHHHHH-CcCCC
Confidence 9999999985432 2233344433 489999999999988 45543
No 44
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=94.54 E-value=0.0086 Score=55.93 Aligned_cols=91 Identities=21% Similarity=0.235 Sum_probs=67.9
Q ss_pred hcCCHHHHHHHHHHHHhh---CCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHHHHHH
Q 037237 61 QSGDSKKALEMIKESISS---HQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAALLYK 137 (1267)
Q Consensus 61 ~~Gnh~kAL~~~kd~~~~---h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~lL~~ 137 (1267)
..|++.+|++..+..+.. .|+.+.++..-|.+++.+..- +-- +..+.+|+.+.|+....-...|..++.
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~-----~~A---~~~~~~al~~~p~~~~~~~~l~~~~~~ 73 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEY-----RKA---EAVLANGVKQFPNHQALRVFYAMVLYN 73 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCH-----HHH---HHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCH-----HHH---HHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 368899999999999977 377778888888877765421 111 455677999999999998899999999
Q ss_pred HHhhhchhHHHHHHHHHHHhccCCCCCc
Q 037237 138 LAEINDKEWDVVIEACERMLKIGDPYDT 165 (1267)
Q Consensus 138 la~~~~~~Y~~a~~ec~RaL~i~~P~dp 165 (1267)
+|+ |++|+...+++|.. .|.+|
T Consensus 74 ~g~-----~~~A~~~~~~al~~-~p~~~ 95 (117)
T 3k9i_A 74 LGR-----YEQGVELLLKIIAE-TSDDE 95 (117)
T ss_dssp HTC-----HHHHHHHHHHHHHH-HCCCH
T ss_pred cCC-----HHHHHHHHHHHHHh-CCCcH
Confidence 886 79999999999987 45543
No 45
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=94.50 E-value=0.096 Score=52.25 Aligned_cols=101 Identities=16% Similarity=0.129 Sum_probs=64.6
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHH-----Hh-C-----CCcchhh-------------
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAE-----KA-G-----KGTDTQL------------- 108 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~-----~~-~-----~~~~~k~------------- 108 (1267)
.+.|..+++.|++.+|+..++..+..+|+.+.++..-|.++..+.. .. + +| +...
T Consensus 10 ~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~ 88 (176)
T 2r5s_A 10 LKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQA 88 (176)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhc
Confidence 4455555566666666666666655555555555555555543211 00 0 00 0000
Q ss_pred ---hhhhhhhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 109 ---EHLTTAASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 109 ---~~l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
.-+..+++|+.+.|++...-...|.+++.+|+ |++|+...+++|.+
T Consensus 89 ~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~-----~~~A~~~~~~~l~~ 137 (176)
T 2r5s_A 89 AESPELKRLEQELAANPDNFELACELAVQYNQVGR-----DEEALELLWNILKV 137 (176)
T ss_dssp TSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHTT
T ss_pred ccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHccc-----HHHHHHHHHHHHHh
Confidence 00445677899999999998999999888875 79999999999998
No 46
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=94.26 E-value=0.099 Score=58.82 Aligned_cols=104 Identities=13% Similarity=0.185 Sum_probs=84.2
Q ss_pred hhHHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhh
Q 037237 47 PEINNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVE 126 (1267)
Q Consensus 47 ~~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~ 126 (1267)
..+..-...|..+++.|++.+|+++.+.++..+|..+.++...|.+++.+. +. +-- +..+++|+.+.|+...
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g----~~-~~A---~~~~~~al~~~p~~~~ 95 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMG----KS-KAA---LPDLTKVIQLKMDFTA 95 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCC----CH-HHH---HHHHHHHHhcCCCcHH
Confidence 456666778889999999999999999999999999999999999888764 22 111 4446678999999988
Q ss_pred hHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 127 LSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 127 ~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
.....|.+++.+|+ |++|+...++++.+ +|.+
T Consensus 96 ~~~~l~~~~~~~g~-----~~~A~~~~~~~~~~-~~~~ 127 (450)
T 2y4t_A 96 ARLQRGHLLLKQGK-----LDEAEDDFKKVLKS-NPSE 127 (450)
T ss_dssp HHHHHHHHHHHTTC-----HHHHHHHHHHHHTS-CCCH
T ss_pred HHHHHHHHHHHcCC-----HHHHHHHHHHHHhc-CCCC
Confidence 88888888888775 89999999999987 3543
No 47
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=94.16 E-value=0.15 Score=50.93 Aligned_cols=105 Identities=16% Similarity=0.098 Sum_probs=81.5
Q ss_pred hHHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhh
Q 037237 48 EINNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVEL 127 (1267)
Q Consensus 48 ~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~ 127 (1267)
....-...|..++..|++.+|++.++..+..+|..+.++...|.++..+. +. +.- +..+.+|+.+.|+....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~-~~A---~~~~~~a~~~~~~~~~~ 78 (225)
T 2vq2_A 7 VSNIKTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLK----VN-DKA---QESFRQALSIKPDSAEI 78 (225)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHHH
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcC----Ch-HHH---HHHHHHHHHhCCCChHH
Confidence 34455677888899999999999999999999988888888888887654 22 111 34456688899999888
Q ss_pred HHHHHHHHHHH-HhhhchhHHHHHHHHHHHhccCCCCCccc
Q 037237 128 SFLHAALLYKL-AEINDKEWDVVIEACERMLKIGDPYDTLL 167 (1267)
Q Consensus 128 a~f~A~lL~~l-a~~~~~~Y~~a~~ec~RaL~i~~P~dp~~ 167 (1267)
-...|.+++.+ ++ |++|+...++++. .|.+|..
T Consensus 79 ~~~l~~~~~~~~~~-----~~~A~~~~~~~~~--~~~~~~~ 112 (225)
T 2vq2_A 79 NNNYGWFLCGRLNR-----PAESMAYFDKALA--DPTYPTP 112 (225)
T ss_dssp HHHHHHHHHTTTCC-----HHHHHHHHHHHHT--STTCSCH
T ss_pred HHHHHHHHHHhcCc-----HHHHHHHHHHHHc--CcCCcch
Confidence 77888888776 54 8999999999998 5555543
No 48
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=93.99 E-value=0.016 Score=56.99 Aligned_cols=93 Identities=11% Similarity=0.011 Sum_probs=74.4
Q ss_pred hhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHHHHHHHH
Q 037237 60 FQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAALLYKLA 139 (1267)
Q Consensus 60 ~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~lL~~la 139 (1267)
..+|+..+|+..++..+...|..+..++.-|.+++++. +. +-- +..+.+|+.+.|++...-...|.+++.++
T Consensus 8 ~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~----~~-~~A---~~~~~~al~~~p~~~~a~~~lg~~~~~~~ 79 (150)
T 4ga2_A 8 RSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAK----EY-DLA---KKYICTYINVQERDPKAHRFLGLLYELEE 79 (150)
T ss_dssp CCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcC----CH-HHH---HHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 35788899999999998777888888888888887764 22 111 44567799999999998889999988877
Q ss_pred hhhchhHHHHHHHHHHHhccCCCCCcc
Q 037237 140 EINDKEWDVVIEACERMLKIGDPYDTL 166 (1267)
Q Consensus 140 ~~~~~~Y~~a~~ec~RaL~i~~P~dp~ 166 (1267)
+ |++|+...++|+.+ +|.+|.
T Consensus 80 ~-----~~~A~~~~~~al~~-~p~~~~ 100 (150)
T 4ga2_A 80 N-----TDKAVECYRRSVEL-NPTQKD 100 (150)
T ss_dssp C-----HHHHHHHHHHHHHH-CTTCHH
T ss_pred c-----hHHHHHHHHHHHHh-CCCCHH
Confidence 5 79999999999998 576543
No 49
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=93.94 E-value=0.11 Score=47.01 Aligned_cols=93 Identities=16% Similarity=0.159 Sum_probs=70.3
Q ss_pred HHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHH
Q 037237 54 LRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAA 133 (1267)
Q Consensus 54 ~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~ 133 (1267)
..|...+..|++.+|++++++.+..+|..+.++..-|.++.... +. +.- +..+.++....|+........|.
T Consensus 6 ~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~----~~-~~A---~~~~~~~~~~~~~~~~~~~~l~~ 77 (136)
T 2fo7_A 6 NLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQG----DY-DEA---IEYYQKALELDPRSAEAWYNLGN 77 (136)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT----CH-HHH---HHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhc----CH-HHH---HHHHHHHHHHCCCchHHHHHHHH
Confidence 34667788999999999999999888888888777777776543 32 222 23345577888988877777777
Q ss_pred HHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 134 LLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 134 lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
+++..++ |++|+...++++.+
T Consensus 78 ~~~~~~~-----~~~A~~~~~~~~~~ 98 (136)
T 2fo7_A 78 AYYKQGD-----YDEAIEYYQKALEL 98 (136)
T ss_dssp HHHTTTC-----HHHHHHHHHHHHHH
T ss_pred HHHHhcC-----HHHHHHHHHHHHHh
Confidence 7776554 89999999999987
No 50
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=93.94 E-value=0.14 Score=53.13 Aligned_cols=104 Identities=13% Similarity=0.015 Sum_probs=83.8
Q ss_pred hHHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhh
Q 037237 48 EINNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVEL 127 (1267)
Q Consensus 48 ~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~ 127 (1267)
....-...|...+..|++.+|++.++..+..+|..+.++..-|.++..+. +. +-- +..+.+|+.+.|+....
T Consensus 42 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~----~~-~~A---~~~~~~al~~~~~~~~~ 113 (275)
T 1xnf_A 42 RAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAG----NF-DAA---YEAFDSVLELDPTYNYA 113 (275)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCTHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHcc----CH-HHH---HHHHHHHHhcCccccHH
Confidence 45555677888899999999999999999999999999998898887654 22 111 44467799999999988
Q ss_pred HHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCc
Q 037237 128 SFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYDT 165 (1267)
Q Consensus 128 a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp 165 (1267)
-...|.+++.+++ |++|+...++++.+ +|.++
T Consensus 114 ~~~la~~~~~~g~-----~~~A~~~~~~a~~~-~~~~~ 145 (275)
T 1xnf_A 114 HLNRGIALYYGGR-----DKLAQDDLLAFYQD-DPNDP 145 (275)
T ss_dssp HHHHHHHHHHTTC-----HHHHHHHHHHHHHH-CTTCH
T ss_pred HHHHHHHHHHhcc-----HHHHHHHHHHHHHh-CCCCh
Confidence 8888999888775 79999999999987 45543
No 51
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=93.82 E-value=0.091 Score=60.70 Aligned_cols=100 Identities=11% Similarity=0.107 Sum_probs=82.5
Q ss_pred HHHHHhHhhcCC-HHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHH
Q 037237 53 GLRALSAFQSGD-SKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLH 131 (1267)
Q Consensus 53 ~~~a~~~~~~Gn-h~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~ 131 (1267)
..++.-....|+ +.+|++..+..+..+|+++.+++..|.++..+.. .+.. +..+++|+.+.|+....-...
T Consensus 135 ~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~-~~eA-------l~~~~kal~ldP~~~~a~~~l 206 (382)
T 2h6f_A 135 HFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRD-PSQE-------LEFIADILNQDAKNYHAWQHR 206 (382)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC-CTTH-------HHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccC-HHHH-------HHHHHHHHHhCccCHHHHHHH
Confidence 345666677896 9999999999999999999999999999988742 2222 666788999999999888889
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCcc
Q 037237 132 AALLYKLAEINDKEWDVVIEACERMLKIGDPYDTL 166 (1267)
Q Consensus 132 A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp~ 166 (1267)
+.++..++. |++|+.-+++||.+ +|.++.
T Consensus 207 g~~~~~~g~-----~~eAl~~~~~al~l-~P~~~~ 235 (382)
T 2h6f_A 207 QWVIQEFKL-----WDNELQYVDQLLKE-DVRNNS 235 (382)
T ss_dssp HHHHHHHTC-----CTTHHHHHHHHHHH-CTTCHH
T ss_pred HHHHHHcCC-----hHHHHHHHHHHHHh-CCCCHH
Confidence 999888885 69999999999998 566543
No 52
>3mp2_A Non-structural protein 3; papain-like protease, TGEV, hydrolase; 2.50A {Porcine transmissible gastroenteritiscoronavirus}
Probab=93.75 E-value=0.08 Score=56.84 Aligned_cols=25 Identities=12% Similarity=0.100 Sum_probs=18.5
Q ss_pred EEEec--CCCcEEEEEEecCCCcEEEecCCC
Q 037237 1237 VCVSS--DRQRYIIFVYNHMLEKYVQSDGAT 1265 (1267)
Q Consensus 1237 VcH~G--~gGHYicfvr~~~~g~W~~fDDs~ 1265 (1267)
+++.| ++|||+.|.. ..+ +.+|...
T Consensus 164 ~vF~G~~~~GHY~~~~~--~~~--~~vDG~~ 190 (211)
T 3mp2_A 164 AVYTGTTQNGHYMVDDI--EHG--YCVDGMG 190 (211)
T ss_dssp EEEESCTTTCEEEEEET--TTT--EEEETTE
T ss_pred EEEEcCCCCceEEEEec--ccc--eEEeCCc
Confidence 56778 8999999987 334 7777654
No 53
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=93.68 E-value=0.035 Score=56.66 Aligned_cols=97 Identities=13% Similarity=0.062 Sum_probs=58.3
Q ss_pred HHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHH
Q 037237 50 NNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSF 129 (1267)
Q Consensus 50 ~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~ 129 (1267)
..-...|...++.|++.+|+...+.++..+|..+.++...|.++.... +. +.- +..+.+++...|+......
T Consensus 24 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~~----~~-~~A---~~~~~~~~~~~~~~~~~~~ 95 (243)
T 2q7f_A 24 MTGGQQMGRGSEFGDYEKAAEAFTKAIEENKEDAIPYINFANLLSSVN----EL-ERA---LAFYDKALELDSSAATAYY 95 (243)
T ss_dssp ------------------CCTTHHHHHTTCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcC----CH-HHH---HHHHHHHHHcCCcchHHHH
Confidence 344567778888899999999999998888888888888787776543 22 111 3345667888888877777
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 130 LHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 130 f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
..|.+++.+++ |++|+...++++.+
T Consensus 96 ~la~~~~~~~~-----~~~A~~~~~~~~~~ 120 (243)
T 2q7f_A 96 GAGNVYVVKEM-----YKEAKDMFEKALRA 120 (243)
T ss_dssp HHHHHHHHTTC-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcc-----HHHHHHHHHHHHHh
Confidence 77877777664 78888888888887
No 54
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=93.63 E-value=0.16 Score=45.96 Aligned_cols=96 Identities=10% Similarity=-0.012 Sum_probs=71.1
Q ss_pred HHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCch------
Q 037237 51 NEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNL------ 124 (1267)
Q Consensus 51 ~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s------ 124 (1267)
.-...|..++..|++.+|+..++..+...|..+.++..-|.++.... +. +-- +..+.+|+.+.|+.
T Consensus 6 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~----~~-~~A---~~~~~~~~~~~~~~~~~~~~ 77 (131)
T 1elr_A 6 KEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKG----DY-NKC---RELCEKAIEVGRENREDYRQ 77 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT----CH-HHH---HHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhc----cH-HHH---HHHHHHHHhhccccchhHHH
Confidence 34566778899999999999999999999999888888888887654 22 111 33355677787776
Q ss_pred -hhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 125 -VELSFLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 125 -~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
.......|..++.++ .|++|+...++++.+
T Consensus 78 ~~~~~~~la~~~~~~~-----~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 78 IAKAYARIGNSYFKEE-----KYKDAIHFYNKSLAE 108 (131)
T ss_dssp HHHHHHHHHHHHHHTT-----CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-----cHHHHHHHHHHHHHh
Confidence 444445555555544 489999999999987
No 55
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=93.60 E-value=0.13 Score=52.70 Aligned_cols=99 Identities=10% Similarity=0.029 Sum_probs=79.8
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHH
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHA 132 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A 132 (1267)
...|.-.+..|++.+|++..+..+..+|+.+.++..-|.++..+. +. +-- +..+++|+.++|++..+....|
T Consensus 46 ~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~----~~-~~A---~~~~~~al~~~p~~~~~~~~~~ 117 (228)
T 4i17_A 46 YNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMK----NN-QEY---IATLTEGIKAVPGNATIEKLYA 117 (228)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcc----cH-HHH---HHHHHHHHHHCCCcHHHHHHHH
Confidence 347888899999999999999999999999999999999887764 22 111 5556779999999998777777
Q ss_pred HHHHHHHhhh--chhHHHHHHHHHHHhcc
Q 037237 133 ALLYKLAEIN--DKEWDVVIEACERMLKI 159 (1267)
Q Consensus 133 ~lL~~la~~~--~~~Y~~a~~ec~RaL~i 159 (1267)
..++.+|.-. ...|++|+.-.++|+.+
T Consensus 118 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 146 (228)
T 4i17_A 118 IYYLKEGQKFQQAGNIEKAEENYKHATDV 146 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred HHHHHHhHHHHHhccHHHHHHHHHHHHhc
Confidence 7777777543 23799999999999998
No 56
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=93.55 E-value=0.19 Score=62.96 Aligned_cols=103 Identities=12% Similarity=0.129 Sum_probs=82.1
Q ss_pred HHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhH
Q 037237 49 INNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELS 128 (1267)
Q Consensus 49 i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a 128 (1267)
..+-...|.-+.+.|++.+|++..+..+..+|+.+.+|.--|.++.++.+-- .. +..+++|+++.|+....-
T Consensus 9 a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~-eA-------~~~~~~Al~l~P~~~~a~ 80 (723)
T 4gyw_A 9 ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ-EA-------LMHYKEAIRISPTFADAY 80 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHH-HH-------HHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH-HH-------HHHHHHHHHhCCCCHHHH
Confidence 3445567778889999999999999999999999999999998888765221 11 555778999999998887
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCc
Q 037237 129 FLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYDT 165 (1267)
Q Consensus 129 ~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp 165 (1267)
.-.|.++..+++ |++|++..++||.+ +|.++
T Consensus 81 ~nLg~~l~~~g~-----~~~A~~~~~kAl~l-~P~~~ 111 (723)
T 4gyw_A 81 SNMGNTLKEMQD-----VQGALQCYTRAIQI-NPAFA 111 (723)
T ss_dssp HHHHHHHHHTTC-----HHHHHHHHHHHHHH-CTTCH
T ss_pred HHHHHHHHHcCC-----HHHHHHHHHHHHHh-CCCCH
Confidence 788888888775 79999999999988 56543
No 57
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=93.36 E-value=0.23 Score=49.03 Aligned_cols=103 Identities=9% Similarity=0.025 Sum_probs=67.9
Q ss_pred HHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHH------------HHhCCCcchhhh------------
Q 037237 54 LRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLA------------EKAGKGTDTQLE------------ 109 (1267)
Q Consensus 54 ~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA------------~~~~~~~~~k~~------------ 109 (1267)
..|.-.++.|++.+|++.++.+...+|..+.++...|.++.... ..+ +|.+....
T Consensus 44 ~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~-~~~~~~~~~~lg~~~~~~g~ 122 (184)
T 3vtx_A 44 KLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQRAIAL-NTVYADAYYKLGLVYDSMGE 122 (184)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CccchHHHHHHHHHHHHhCC
Confidence 34455556666666666666666666666666666665554321 111 11011111
Q ss_pred h---hhhhhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCC
Q 037237 110 H---LTTAASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPY 163 (1267)
Q Consensus 110 ~---l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~ 163 (1267)
| +..+++|+.+.|+....-...|.+++.+|+ |++|+...++||.+ +|.
T Consensus 123 ~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~-----~~~A~~~~~~al~~-~p~ 173 (184)
T 3vtx_A 123 HDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGL-----RDEAVKYFKKALEK-EEK 173 (184)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHT-THH
T ss_pred chhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCC-----HHHHHHHHHHHHhC-Ccc
Confidence 1 556788999999999888888998888775 79999999999998 343
No 58
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=93.36 E-value=0.24 Score=53.09 Aligned_cols=98 Identities=13% Similarity=0.155 Sum_probs=81.5
Q ss_pred HHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhH
Q 037237 49 INNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELS 128 (1267)
Q Consensus 49 i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a 128 (1267)
+..-...|...++.|++.+|+...+.++..+|..+.++...|.+++.+. +. +-- +..+.+++.+.|+....-
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~----~~-~~A---~~~~~~~~~~~~~~~~~~ 74 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMG----KS-KAA---LPDLTKVIALKMDFTAAR 74 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT----CH-HHH---HHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcc----CH-HHH---HHHHHHHHHhCCCcchHH
Confidence 3455677888999999999999999999999999999999999888764 22 111 444667899999999888
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 129 FLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 129 ~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
...|.+++.+++ |++|+...++++.+
T Consensus 75 ~~l~~~~~~~~~-----~~~A~~~~~~~~~~ 100 (359)
T 3ieg_A 75 LQRGHLLLKQGK-----LDEAEDDFKKVLKS 100 (359)
T ss_dssp HHHHHHHHHHTC-----HHHHHHHHHHHHTS
T ss_pred HHHHHHHHHcCC-----hHHHHHHHHHHHhc
Confidence 888988888775 89999999999988
No 59
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=93.29 E-value=0.19 Score=52.89 Aligned_cols=109 Identities=15% Similarity=0.097 Sum_probs=78.0
Q ss_pred HHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCC---chhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchh
Q 037237 49 INNEGLRALSAFQSGDSKKALEMIKESISSHQDS---PHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLV 125 (1267)
Q Consensus 49 i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s---~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~ 125 (1267)
...-..+|..+++.|++.+|++..+.++..+|++ +.+++.-|.+++++. +. +.- +..+.+++.++|++.
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~----~~-~~A---~~~~~~~l~~~p~~~ 86 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNK----EY-LLA---ASEYERFIQIYQIDP 86 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhC----cH-HHH---HHHHHHHHHHCCCCc
Confidence 3455688999999999999999999999999988 778888888888764 22 111 555677999999775
Q ss_pred hhH---HHHHHHHHHHHhhh---chhHHHHHHHHHHHhccCCCCCcc
Q 037237 126 ELS---FLHAALLYKLAEIN---DKEWDVVIEACERMLKIGDPYDTL 166 (1267)
Q Consensus 126 ~~a---~f~A~lL~~la~~~---~~~Y~~a~~ec~RaL~i~~P~dp~ 166 (1267)
... ...|..++.++..+ ...|++|+...++++.. .|.++.
T Consensus 87 ~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~-~p~~~~ 132 (261)
T 3qky_A 87 RVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDR-YPNHEL 132 (261)
T ss_dssp THHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHH-CTTCTT
T ss_pred hhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHH-CcCchh
Confidence 432 24455555511100 12589999999999988 465543
No 60
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=93.28 E-value=0.25 Score=52.92 Aligned_cols=98 Identities=17% Similarity=0.207 Sum_probs=80.1
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHH
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHA 132 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A 132 (1267)
...|...+..|++.+|++.+++++..+|..+.++...|.++..+. +. +-- +..+.+++.+.|+....-...|
T Consensus 124 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~A---~~~~~~~~~~~~~~~~~~~~la 195 (359)
T 3ieg_A 124 RSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRAECFIKEG----EP-RKA---ISDLKAASKLKSDNTEAFYKIS 195 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHTTCSCCHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCC----CH-HHH---HHHHHHHHHhCCCCHHHHHHHH
Confidence 445788899999999999999999999999999999998888764 22 111 4446678999999999888999
Q ss_pred HHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 133 ALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 133 ~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
.+++.+++ |++|+...++++.+ .|.+
T Consensus 196 ~~~~~~~~-----~~~A~~~~~~a~~~-~~~~ 221 (359)
T 3ieg_A 196 TLYYQLGD-----HELSLSEVRECLKL-DQDH 221 (359)
T ss_dssp HHHHHHTC-----HHHHHHHHHHHHHH-CTTC
T ss_pred HHHHHcCC-----HHHHHHHHHHHHhh-Cccc
Confidence 99888775 79999999999987 3443
No 61
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=93.21 E-value=0.27 Score=51.81 Aligned_cols=108 Identities=16% Similarity=0.114 Sum_probs=77.1
Q ss_pred HHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCC---chhhhhhhHHHHHHHHHhCCCcchhhhh---hhhhhhhhccCC
Q 037237 49 INNEGLRALSAFQSGDSKKALEMIKESISSHQDS---PHLHCLEAFIHHSLAEKAGKGTDTQLEH---LTTAASAVGRFP 122 (1267)
Q Consensus 49 i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s---~~~h~~qg~v~~~lA~~~~~~~~~k~~~---l~~~~~Av~l~p 122 (1267)
...-...|...++.|++.+|+...+.++..+|++ +.+++.-|.+++.+..... . + .-.| +..+++++..+|
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~-~-~-~~~~~~A~~~~~~~l~~~p 128 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYE-L-D-QTDTRKAIEAFQLFIDRYP 128 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTT-S-C-CHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhccccc-c-c-chhHHHHHHHHHHHHHHCc
Confidence 4556677888999999999999999999998755 5567778888877421100 0 0 1112 566778999999
Q ss_pred chhhhH-----------------HHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCc
Q 037237 123 NLVELS-----------------FLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYDT 165 (1267)
Q Consensus 123 ~s~~~a-----------------~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp 165 (1267)
++.... ...|.+++.++ .|++|+...++++.. .|..|
T Consensus 129 ~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g-----~~~~A~~~~~~~l~~-~p~~~ 182 (261)
T 3qky_A 129 NHELVDDATQKIRELRAKLARKQYEAARLYERRE-----LYEAAAVTYEAVFDA-YPDTP 182 (261)
T ss_dssp TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CHHHHHHHHHHHHHH-CTTST
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-----CHHHHHHHHHHHHHH-CCCCc
Confidence 987655 34466666655 489999999999987 46544
No 62
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=93.18 E-value=0.099 Score=61.87 Aligned_cols=96 Identities=17% Similarity=0.192 Sum_probs=79.0
Q ss_pred HHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHHH
Q 037237 55 RALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAAL 134 (1267)
Q Consensus 55 ~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~l 134 (1267)
.|..+++.|++.+|++..+.++..+|..+.++..-|.++.++..- +.. +..+++|+.+.|+....-...|.+
T Consensus 12 lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~-~~A-------~~~~~~al~l~p~~~~~~~~lg~~ 83 (477)
T 1wao_1 12 QANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECY-GYA-------LGDATRAIELDKKYIKGYYRRAAS 83 (477)
T ss_dssp SSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH-HHH-------HHHHHHHHHSCTTCHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCH-HHH-------HHHHHHHHHhCCCCHHHHHHHHHH
Confidence 355678899999999999999999999999999989888776422 111 555778999999999888888999
Q ss_pred HHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 135 LYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 135 L~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
++.+++ |++|+...++||.+ +|.+
T Consensus 84 ~~~~g~-----~~eA~~~~~~al~~-~p~~ 107 (477)
T 1wao_1 84 NMALGK-----FRAALRDYETVVKV-KPHD 107 (477)
T ss_dssp HHHHTC-----HHHHHHHHHHHHHH-STTC
T ss_pred HHHcCC-----HHHHHHHHHHHHHh-CCCC
Confidence 888875 89999999999998 4554
No 63
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=93.14 E-value=0.19 Score=56.36 Aligned_cols=101 Identities=16% Similarity=0.105 Sum_probs=79.2
Q ss_pred HHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCC---------------chhhhhhhHHHHHHHHHhCCCcchhhhhhhhh
Q 037237 50 NNEGLRALSAFQSGDSKKALEMIKESISSHQDS---------------PHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTA 114 (1267)
Q Consensus 50 ~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s---------------~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~ 114 (1267)
..-...+..+++.|++.+|+...+..+...|.. +.++..-|.+++++. +. +-- +..+
T Consensus 148 ~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g----~~-~~A---~~~~ 219 (336)
T 1p5q_A 148 TIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQ----AF-SAA---IESC 219 (336)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTT----CH-HHH---HHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcC----CH-HHH---HHHH
Confidence 345567888999999999999999999999877 466666666666543 21 111 5567
Q ss_pred hhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 115 ASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 115 ~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
.+|+.+.|+....-...|.+++.+++ |++|+...++||.+ +|.+
T Consensus 220 ~~al~~~p~~~~a~~~lg~~~~~~g~-----~~~A~~~~~~al~l-~P~~ 263 (336)
T 1p5q_A 220 NKALELDSNNEKGLSRRGEAHLAVND-----FELARADFQKVLQL-YPNN 263 (336)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHH-CSSC
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHCCC-----HHHHHHHHHHHHHH-CCCC
Confidence 78999999999888888888888775 89999999999998 4554
No 64
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=92.93 E-value=0.16 Score=53.90 Aligned_cols=101 Identities=8% Similarity=-0.113 Sum_probs=64.8
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHH------------HHhCCCcchhh------------
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLA------------EKAGKGTDTQL------------ 108 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA------------~~~~~~~~~k~------------ 108 (1267)
..+|..++..|++.+|+++.+.++..+|..+.++...|.+++.+. ... +|.+...
T Consensus 26 ~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~ 104 (330)
T 3hym_B 26 VSLAERHYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDL-YPSNPVSWFAVGCYYLMVG 104 (330)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHH-CTTSTHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHh-CcCCHHHHHHHHHHHHHhh
Confidence 456667777788888888888888777777766666666655432 111 1101110
Q ss_pred -hh---hhhhhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 109 -EH---LTTAASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 109 -~~---l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
.| +..+.+|+.+.|+....-...|.+++.+++ |++|+...++++.+
T Consensus 105 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~-----~~~A~~~~~~a~~~ 154 (330)
T 3hym_B 105 HKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESE-----HDQAMAAYFTAAQL 154 (330)
T ss_dssp SCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTC-----HHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccC-----HHHHHHHHHHHHHh
Confidence 11 334566777778777776677777776664 68888888888877
No 65
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=92.83 E-value=0.27 Score=52.17 Aligned_cols=44 Identities=7% Similarity=0.013 Sum_probs=32.1
Q ss_pred hhhhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 112 TTAASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 112 ~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
..+.+++...|++...-...|..++.++. .|++|+.-.++++.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~A~~~~~~a~~~ 120 (330)
T 3hym_B 77 YLSHKLVDLYPSNPVSWFAVGCYYLMVGH----KNEHARRYLSKATTL 120 (330)
T ss_dssp HHHHHHHHHCTTSTHHHHHHHHHHHHSCS----CHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCcCCHHHHHHHHHHHHHhhh----hHHHHHHHHHHHHHh
Confidence 34567777888887777777777766652 378888888888877
No 66
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=92.82 E-value=0.17 Score=55.50 Aligned_cols=100 Identities=11% Similarity=0.087 Sum_probs=81.6
Q ss_pred HHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHH
Q 037237 51 NEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFL 130 (1267)
Q Consensus 51 ~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f 130 (1267)
.-..+|..+++.|++.+|++..+.++..+|..+.++..-|.++..+. +. +-- +..+.+|+.+.|+....-..
T Consensus 67 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g----~~-~~A---~~~~~~al~~~p~~~~~~~~ 138 (365)
T 4eqf_A 67 GAFEEGLKRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENE----NE-QAA---IVALQRCLELQPNNLKALMA 138 (365)
T ss_dssp THHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCC----CH-HHH---HHHHHHHHhcCCCCHHHHHH
Confidence 34677899999999999999999999999999999999999988764 22 111 44467799999999888888
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 131 HAALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 131 ~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
.|.+++.+++ |++|+...++++.+ .|.+
T Consensus 139 l~~~~~~~g~-----~~~A~~~~~~al~~-~p~~ 166 (365)
T 4eqf_A 139 LAVSYTNTSH-----QQDACEALKNWIKQ-NPKY 166 (365)
T ss_dssp HHHHHHHTTC-----HHHHHHHHHHHHHH-CHHH
T ss_pred HHHHHHcccc-----HHHHHHHHHHHHHh-Cccc
Confidence 8888887775 89999999999997 3443
No 67
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=92.79 E-value=0.15 Score=63.89 Aligned_cols=99 Identities=16% Similarity=0.062 Sum_probs=82.4
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHH
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHA 132 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A 132 (1267)
...|.-+.+.|++.+|++..+..+..+|+.+.+|.--|.++.++.+-- .. +..+++|+++.|+....-.-.|
T Consensus 47 ~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~-~A-------~~~~~kAl~l~P~~~~a~~~Lg 118 (723)
T 4gyw_A 47 SNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQ-GA-------LQCYTRAIQINPAFADAHSNLA 118 (723)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-HH-------HHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH-HH-------HHHHHHHHHhCCCCHHHHHHHH
Confidence 455677788999999999999999999999999999999988765221 11 5667889999999998888888
Q ss_pred HHHHHHHhhhchhHHHHHHHHHHHhccCCCCCc
Q 037237 133 ALLYKLAEINDKEWDVVIEACERMLKIGDPYDT 165 (1267)
Q Consensus 133 ~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp 165 (1267)
.+++.+|+ |++|+...++||.+ +|.++
T Consensus 119 ~~~~~~g~-----~~eAi~~~~~Al~l-~P~~~ 145 (723)
T 4gyw_A 119 SIHKDSGN-----IPEAIASYRTALKL-KPDFP 145 (723)
T ss_dssp HHHHHTTC-----HHHHHHHHHHHHHH-CSCCH
T ss_pred HHHHHcCC-----HHHHHHHHHHHHHh-CCCCh
Confidence 88888775 89999999999998 56554
No 68
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=92.66 E-value=0.32 Score=50.05 Aligned_cols=99 Identities=10% Similarity=-0.014 Sum_probs=76.0
Q ss_pred CCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhh---hhhhhhhhccCCchhhhHHHHHHHHHHHH
Q 037237 63 GDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEH---LTTAASAVGRFPNLVELSFLHAALLYKLA 139 (1267)
Q Consensus 63 Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~---l~~~~~Av~l~p~s~~~a~f~A~lL~~la 139 (1267)
+.+..|++..+..+..+|+.+-+++--|.++.+++.--.-. ..+..| +..+++|+.+.|+....-.-.+..++.+|
T Consensus 16 ~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~-~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg 94 (158)
T 1zu2_A 16 LLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSIS-DAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFA 94 (158)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHH-HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhh-hhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhc
Confidence 45678999999999999999999999999999987542111 222233 66788899999999887777788888776
Q ss_pred hhh------chhHHHHHHHHHHHhccCCCC
Q 037237 140 EIN------DKEWDVVIEACERMLKIGDPY 163 (1267)
Q Consensus 140 ~~~------~~~Y~~a~~ec~RaL~i~~P~ 163 (1267)
.-. ...|++|+.-.+|||.+ +|.
T Consensus 95 ~l~P~~~~a~g~~~eA~~~~~kAl~l-~P~ 123 (158)
T 1zu2_A 95 FLTPDETEAKHNFDLATQFFQQAVDE-QPD 123 (158)
T ss_dssp HHCCCHHHHHHHHHHHHHHHHHHHHH-CTT
T ss_pred ccCcchhhhhccHHHHHHHHHHHHHh-CCC
Confidence 210 12599999999999999 454
No 69
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=92.53 E-value=0.3 Score=46.87 Aligned_cols=100 Identities=7% Similarity=0.054 Sum_probs=76.1
Q ss_pred hhHHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhh
Q 037237 47 PEINNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVE 126 (1267)
Q Consensus 47 ~~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~ 126 (1267)
.....-...|...+..|++.+|+..++.++..+|..+.++..-|.++.... +. +.- +..+.++....|+...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~A---~~~~~~~~~~~~~~~~ 77 (186)
T 3as5_A 6 IRQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTG----AV-DRG---TELLERSLADAPDNVK 77 (186)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHH
T ss_pred hhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcC----CH-HHH---HHHHHHHHhcCCCCHH
Confidence 334455667888899999999999999999888888888888888776543 22 222 3335567888899888
Q ss_pred hHHHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 127 LSFLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 127 ~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
.-...|.+++..++ |++|+...++++.+
T Consensus 78 ~~~~~a~~~~~~~~-----~~~A~~~~~~~~~~ 105 (186)
T 3as5_A 78 VATVLGLTYVQVQK-----YDLAVPLLIKVAEA 105 (186)
T ss_dssp HHHHHHHHHHHHTC-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC-----HHHHHHHHHHHHhc
Confidence 87788888777665 79999999998887
No 70
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=92.50 E-value=0.27 Score=53.47 Aligned_cols=102 Identities=11% Similarity=0.019 Sum_probs=82.0
Q ss_pred HHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHH
Q 037237 52 EGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLH 131 (1267)
Q Consensus 52 e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~ 131 (1267)
-..+|..+++.|++.+|+..++.++..+|..+.++..-|.++..+. +. +-- +..+.+|+.+.|+....-...
T Consensus 67 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g----~~-~~A---~~~~~~al~~~~~~~~~~~~l 138 (368)
T 1fch_A 67 PFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENE----QE-LLA---ISALRRCLELKPDNQTALMAL 138 (368)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCc----CH-HHH---HHHHHHHHhcCCCCHHHHHHH
Confidence 4578889999999999999999999999999999988888887664 22 111 445677899999999888888
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCccc
Q 037237 132 AALLYKLAEINDKEWDVVIEACERMLKIGDPYDTLL 167 (1267)
Q Consensus 132 A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp~~ 167 (1267)
|.+++.+|+ |++|+...++++.+ .|.++..
T Consensus 139 ~~~~~~~g~-----~~~A~~~~~~~~~~-~~~~~~~ 168 (368)
T 1fch_A 139 AVSFTNESL-----QRQACEILRDWLRY-TPAYAHL 168 (368)
T ss_dssp HHHHHHTTC-----HHHHHHHHHHHHHT-STTTGGG
T ss_pred HHHHHHcCC-----HHHHHHHHHHHHHh-CcCcHHH
Confidence 888888775 79999999999997 4554433
No 71
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=92.47 E-value=0.3 Score=51.81 Aligned_cols=103 Identities=11% Similarity=-0.013 Sum_probs=81.1
Q ss_pred HHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHH
Q 037237 51 NEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFL 130 (1267)
Q Consensus 51 ~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f 130 (1267)
.-..+|...++.|++.+|+.+.++++..+|..+.++..-|.++.... +. +.- +..+.+|+.+.|+....-..
T Consensus 23 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~-~~A---~~~~~~a~~~~~~~~~~~~~ 94 (327)
T 3cv0_A 23 NPMEEGLSMLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENE----KD-GLA---IIALNHARMLDPKDIAVHAA 94 (327)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC----CH-HHH---HHHHHHHHhcCcCCHHHHHH
Confidence 34678889999999999999999999999998888888888877653 22 111 44456688999999888778
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCccc
Q 037237 131 HAALLYKLAEINDKEWDVVIEACERMLKIGDPYDTLL 167 (1267)
Q Consensus 131 ~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp~~ 167 (1267)
.|..++.+++ |++|+...++++.+ +|.++..
T Consensus 95 la~~~~~~~~-----~~~A~~~~~~~~~~-~~~~~~~ 125 (327)
T 3cv0_A 95 LAVSHTNEHN-----ANAALASLRAWLLS-QPQYEQL 125 (327)
T ss_dssp HHHHHHHTTC-----HHHHHHHHHHHHHT-STTTTTC
T ss_pred HHHHHHHcCC-----HHHHHHHHHHHHHh-CCccHHH
Confidence 8888777664 89999999999987 4655433
No 72
>2fe8_A PP1AB, ORF1AB, replicase polyprotein 1AB; protease, hydrolase; 1.85A {Sars coronavirus} PDB: 3e9s_A* 3mj5_A*
Probab=92.42 E-value=0.15 Score=57.83 Aligned_cols=28 Identities=14% Similarity=-0.014 Sum_probs=19.9
Q ss_pred EEEEec--CCCcEEEEEEecCCCcEEEecCCCC
Q 037237 1236 MVCVSS--DRQRYIIFVYNHMLEKYVQSDGATD 1266 (1267)
Q Consensus 1236 VVcH~G--~gGHYicfvr~~~~g~W~~fDDs~V 1266 (1267)
...+.| ++|||+-+.. ..+. ++||...+
T Consensus 262 a~vF~G~~~~GHYt~~~~--~~~~-~~~Dg~~~ 291 (315)
T 2fe8_A 262 ANEYTGNYQCGHYTHITA--KETL-YRIDGAHL 291 (315)
T ss_dssp EEEEESCGGGCEEEEEEE--SSSE-EEEETTEE
T ss_pred EEEEECCCCccceEEEec--CCce-eEEeCCcc
Confidence 345678 7999999987 3344 78887654
No 73
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=92.37 E-value=0.26 Score=57.81 Aligned_cols=101 Identities=12% Similarity=0.061 Sum_probs=76.1
Q ss_pred HHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCC---------------chhhhhhhHHHHHHHHHhCCCcchhhhhhhhhh
Q 037237 51 NEGLRALSAFQSGDSKKALEMIKESISSHQDS---------------PHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAA 115 (1267)
Q Consensus 51 ~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s---------------~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~ 115 (1267)
.-..++..+++.|++.+|+...+..+...|.. +.++.-.|.+++++. +. +-- +..+.
T Consensus 270 ~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g----~~-~~A---~~~~~ 341 (457)
T 1kt0_A 270 IVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLR----EY-TKA---VECCD 341 (457)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTT----CH-HHH---HHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhc----CH-HHH---HHHHH
Confidence 45567888999999999999999999888876 455666666655543 21 111 55678
Q ss_pred hhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCc
Q 037237 116 SAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYDT 165 (1267)
Q Consensus 116 ~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp 165 (1267)
+|+.+.|+....-...|.+++.+++ |++|+...++||.+ +|.++
T Consensus 342 ~al~~~p~~~~a~~~~g~a~~~~g~-----~~~A~~~~~~al~l-~P~~~ 385 (457)
T 1kt0_A 342 KALGLDSANEKGLYRRGEAQLLMNE-----FESAKGDFEKVLEV-NPQNK 385 (457)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHTT-C----
T ss_pred HHHhcCCccHHHHHHHHHHHHHccC-----HHHHHHHHHHHHHh-CCCCH
Confidence 8999999998888888888888775 89999999999998 46543
No 74
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=92.34 E-value=0.35 Score=49.15 Aligned_cols=100 Identities=12% Similarity=0.116 Sum_probs=54.2
Q ss_pred HHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHH------------HHhCCCcchhhhh-----------
Q 037237 54 LRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLA------------EKAGKGTDTQLEH----------- 110 (1267)
Q Consensus 54 ~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA------------~~~~~~~~~k~~~----------- 110 (1267)
..|.-.+..|++.+|++.++.++...|..+.++..-|.++..+. ...... +....+
T Consensus 96 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~ 174 (243)
T 2q7f_A 96 GAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN-DTEARFQFGMCLANEGM 174 (243)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHcCC
Confidence 34445556666666666666666666666666666665554331 111000 000000
Q ss_pred ----hhhhhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 111 ----LTTAASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 111 ----l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
+..+.+++...|+........|.+++.+++ |++|+.-.++++.+
T Consensus 175 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-----~~~A~~~~~~~~~~ 222 (243)
T 2q7f_A 175 LDEALSQFAAVTEQDPGHADAFYNAGVTYAYKEN-----REKALEMLDKAIDI 222 (243)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-----TTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccC-----HHHHHHHHHHHHcc
Confidence 233455666667666665566666655554 56677777777665
No 75
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=92.28 E-value=0.33 Score=48.81 Aligned_cols=98 Identities=12% Similarity=-0.013 Sum_probs=74.6
Q ss_pred HHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchh----
Q 037237 50 NNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLV---- 125 (1267)
Q Consensus 50 ~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~---- 125 (1267)
..-...|.-.++.|++.+|++..+..+..+|..+.++..-|.+++.+. +. +-- +..+.+|+.+.|+..
T Consensus 38 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~----~~-~~A---~~~~~~al~~~~~~~~~~~ 109 (213)
T 1hh8_A 38 RICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTE----KY-DLA---IKDLKEALIQLRGNQLIDY 109 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHTTTTCSEEEC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcc----cH-HHH---HHHHHHHHHhCCCccHHHH
Confidence 345667788889999999999999999999999999998898887754 22 111 344566778777654
Q ss_pred ------------hhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccC
Q 037237 126 ------------ELSFLHAALLYKLAEINDKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 126 ------------~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~ 160 (1267)
..-...|.+++.+++ |++|+...++++.+.
T Consensus 110 ~~~~~~~~~~~~~~~~~l~~~~~~~g~-----~~~A~~~~~~al~~~ 151 (213)
T 1hh8_A 110 KILGLQFKLFACEVLYNIAFMYAKKEE-----WKKAEEQLALATSMK 151 (213)
T ss_dssp GGGTBCCEEEHHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHTTC
T ss_pred HHhccccCccchHHHHHHHHHHHHccC-----HHHHHHHHHHHHHcC
Confidence 555666777776664 899999999999983
No 76
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=92.20 E-value=0.61 Score=44.65 Aligned_cols=97 Identities=13% Similarity=0.181 Sum_probs=76.3
Q ss_pred HHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHH
Q 037237 50 NNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSF 129 (1267)
Q Consensus 50 ~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~ 129 (1267)
..-...|.-.+..|++.+|++.++.++...|..+.++..-|.++.... +. +.- +..+.++....|+......
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~----~~-~~A---~~~~~~~~~~~~~~~~~~~ 114 (186)
T 3as5_A 43 DVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQ----KY-DLA---VPLLIKVAEANPINFNVRF 114 (186)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT----CH-HHH---HHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhc----CH-HHH---HHHHHHHHhcCcHhHHHHH
Confidence 334556777789999999999999999999988888888888877653 32 212 3335668888999988888
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 130 LHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 130 f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
..|..++.+++ |++|+...++++..
T Consensus 115 ~~a~~~~~~~~-----~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 115 RLGVALDNLGR-----FDEAIDSFKIALGL 139 (186)
T ss_dssp HHHHHHHHTTC-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCc-----HHHHHHHHHHHHhc
Confidence 88888887765 79999999999987
No 77
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=92.12 E-value=0.5 Score=49.12 Aligned_cols=107 Identities=15% Similarity=0.136 Sum_probs=72.7
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHH----------HHh---CCCcchhh-hh--------
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLA----------EKA---GKGTDTQL-EH-------- 110 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA----------~~~---~~~~~~k~-~~-------- 110 (1267)
...|..++..|++.+|++..+..+..+|..+.++..-|.+++.+. +.+ +++ .... .|
T Consensus 7 ~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~~~~lg~~~~ 85 (272)
T 3u4t_A 7 FRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNAT-KAKSADFEYYGKILM 85 (272)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTT-TCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCch-hHHHHHHHHHHHHHH
Confidence 356667777777777777777777777776666666666655321 111 112 1100 01
Q ss_pred --------hhhhhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCcc
Q 037237 111 --------LTTAASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYDTL 166 (1267)
Q Consensus 111 --------l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp~ 166 (1267)
+..+.+|+.+.|+....-...|.+++.+++ |++|+.-.++++.+ +|.++.
T Consensus 86 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~-----~~~A~~~~~~al~~-~~~~~~ 143 (272)
T 3u4t_A 86 KKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGN-----FPLAIQYMEKQIRP-TTTDPK 143 (272)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTC-----HHHHHHHHGGGCCS-SCCCHH
T ss_pred HcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccC-----HHHHHHHHHHHhhc-CCCcHH
Confidence 445778899999998888888888888775 89999999999998 565543
No 78
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=91.97 E-value=0.28 Score=53.75 Aligned_cols=101 Identities=11% Similarity=0.018 Sum_probs=64.0
Q ss_pred HHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHHH
Q 037237 55 RALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAAL 134 (1267)
Q Consensus 55 ~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~l 134 (1267)
.|.-+.+.|++.+|++.++.++..+|++.......|.+.... . .. ..... +..+++++..+|++..+-.-.|..
T Consensus 136 l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~--~--~~-~~~eA-~~~~~~~l~~~p~~~~~~~~la~~ 209 (291)
T 3mkr_A 136 TVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAA--G--GE-KLQDA-YYIFQEMADKCSPTLLLLNGQAAC 209 (291)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH--C--TT-HHHHH-HHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHh--C--ch-HHHHH-HHHHHHHHHhCCCcHHHHHHHHHH
Confidence 444455666666666666666666665544444344332211 1 11 00000 445677888899998877778888
Q ss_pred HHHHHhhhchhHHHHHHHHHHHhccCCCCCccc
Q 037237 135 LYKLAEINDKEWDVVIEACERMLKIGDPYDTLL 167 (1267)
Q Consensus 135 L~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp~~ 167 (1267)
+..+|+ |++|+...++||.+ +|.+|..
T Consensus 210 ~~~~g~-----~~eA~~~l~~al~~-~p~~~~~ 236 (291)
T 3mkr_A 210 HMAQGR-----WEAAEGVLQEALDK-DSGHPET 236 (291)
T ss_dssp HHHTTC-----HHHHHHHHHHHHHH-CTTCHHH
T ss_pred HHHcCC-----HHHHHHHHHHHHHh-CCCCHHH
Confidence 888775 79999999999998 5766543
No 79
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=91.79 E-value=0.26 Score=54.64 Aligned_cols=97 Identities=19% Similarity=0.131 Sum_probs=75.6
Q ss_pred HHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHH
Q 037237 54 LRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAA 133 (1267)
Q Consensus 54 ~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~ 133 (1267)
+.|...++.|++.+|++..+.++..+|+.+.++..-|.+++... +. +-- +..+.+|+...|+....-...|.
T Consensus 4 ~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~----~~-~~a---~~~~~~a~~~~p~~~~~~~~lg~ 75 (388)
T 1w3b_A 4 ELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCR----RL-DRS---AHFSTLAIKQNPLLAEAYSNLGN 75 (388)
T ss_dssp THHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC----CH-HHH---HHHHHHHHhcCCCchHHHHHHHH
Confidence 35788899999999999999999999999999988888877653 21 111 33355688889998887778888
Q ss_pred HHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 134 LLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 134 lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
.++..|+ |++|+...++++.+ +|.+
T Consensus 76 ~~~~~g~-----~~~A~~~~~~al~~-~p~~ 100 (388)
T 1w3b_A 76 VYKERGQ-----LQEAIEHYRHALRL-KPDF 100 (388)
T ss_dssp HHHHHTC-----HHHHHHHHHHHHHH-CTTC
T ss_pred HHHHCCC-----HHHHHHHHHHHHHc-Ccch
Confidence 8777765 79999999999887 3543
No 80
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=91.72 E-value=0.22 Score=57.05 Aligned_cols=99 Identities=12% Similarity=0.053 Sum_probs=73.3
Q ss_pred HHHHHHhHhhcCCHHHHHHHHHHHHh----------------hCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhh
Q 037237 52 EGLRALSAFQSGDSKKALEMIKESIS----------------SHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAA 115 (1267)
Q Consensus 52 e~~~a~~~~~~Gnh~kAL~~~kd~~~----------------~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~ 115 (1267)
-...|..+++.|++.+|++..+.++. ..|..+.++.--|.+++++. +. +-- +..+.
T Consensus 226 ~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g----~~-~~A---~~~~~ 297 (370)
T 1ihg_A 226 LKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMS----DW-QGA---VDSCL 297 (370)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTT----CH-HHH---HHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhcc----CH-HHH---HHHHH
Confidence 44678889999999999999999986 33444555555555554432 21 111 55577
Q ss_pred hhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 116 SAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 116 ~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
+|+.+.|+....-...|.+++.+++ |++|+...++|+.+ +|.+
T Consensus 298 ~al~~~p~~~~a~~~lg~~~~~~g~-----~~eA~~~l~~Al~l-~P~~ 340 (370)
T 1ihg_A 298 EALEIDPSNTKALYRRAQGWQGLKE-----YDQALADLKKAQEI-APED 340 (370)
T ss_dssp HHHTTCTTCHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHH-CTTC
T ss_pred HHHHhCchhHHHHHHHHHHHHHccC-----HHHHHHHHHHHHHh-CCCC
Confidence 8999999999888888999888775 89999999999998 4543
No 81
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=91.69 E-value=0.53 Score=41.90 Aligned_cols=82 Identities=15% Similarity=0.197 Sum_probs=60.5
Q ss_pred HHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHH
Q 037237 50 NNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSF 129 (1267)
Q Consensus 50 ~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~ 129 (1267)
..-...|...+..|++.+|++..+..+..+|..+.++..-|.+++.+..- +.. +..+++|+.+.|+.....
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~-~~A-------~~~~~~al~~~p~~~~~~- 75 (111)
T 2l6j_A 5 EKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEY-TQA-------IQMCQQGLRYTSTAEHVA- 75 (111)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH-HHH-------HHHHHHHHTSCSSTTSHH-
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCH-HHH-------HHHHHHHHHhCCCccHHH-
Confidence 34456788899999999999999999999999999999889888876421 111 555677999999983222
Q ss_pred HHHHHHHHHHh
Q 037237 130 LHAALLYKLAE 140 (1267)
Q Consensus 130 f~A~lL~~la~ 140 (1267)
.++..++.+|.
T Consensus 76 ~~~~~~~~~~~ 86 (111)
T 2l6j_A 76 IRSKLQYRLEL 86 (111)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 24555555553
No 82
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=91.68 E-value=0.52 Score=48.90 Aligned_cols=106 Identities=8% Similarity=0.041 Sum_probs=76.3
Q ss_pred HHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCc---hhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhh-
Q 037237 52 EGLRALSAFQSGDSKKALEMIKESISSHQDSP---HLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVEL- 127 (1267)
Q Consensus 52 e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~---~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~- 127 (1267)
-..+|...++.|++.+|+..++.++..+|.++ .++..-|.+++++. +. + .-+..+.+++.++|++...
T Consensus 7 ~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~----~~-~---~A~~~~~~~l~~~P~~~~~~ 78 (225)
T 2yhc_A 7 IYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNA----DL-P---LAQAAIDRFIRLNPTHPNID 78 (225)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTT----CH-H---HHHHHHHHHHHHCTTCTTHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcC----CH-H---HHHHHHHHHHHHCcCCCcHH
Confidence 35678899999999999999999999998775 46777787777654 21 1 0156678899999998763
Q ss_pred -HH-HHHHHHHHHHhh-----------h--chhHHHHHHHHHHHhccCCCCCcc
Q 037237 128 -SF-LHAALLYKLAEI-----------N--DKEWDVVIEACERMLKIGDPYDTL 166 (1267)
Q Consensus 128 -a~-f~A~lL~~la~~-----------~--~~~Y~~a~~ec~RaL~i~~P~dp~ 166 (1267)
|. ..|.+++.++.. . ...|++|+...++++.. .|.++.
T Consensus 79 ~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~-~P~~~~ 131 (225)
T 2yhc_A 79 YVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRG-YPNSQY 131 (225)
T ss_dssp HHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTT-CTTCTT
T ss_pred HHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHH-CcCChh
Confidence 44 456666654310 0 13689999999999887 466543
No 83
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=91.43 E-value=0.31 Score=60.19 Aligned_cols=97 Identities=14% Similarity=0.112 Sum_probs=79.0
Q ss_pred HhHhhcCCHHHHHHHHHHHH--------hhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhH
Q 037237 57 LSAFQSGDSKKALEMIKESI--------SSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELS 128 (1267)
Q Consensus 57 ~~~~~~Gnh~kAL~~~kd~~--------~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a 128 (1267)
+.+++.|++.+|++.++..+ ..+|+++.++...|.+++++..- +.. +..+++|+.+.|++...-
T Consensus 399 ~~a~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~-~~A-------~~~~~~al~~~p~~~~a~ 470 (681)
T 2pzi_A 399 LQATVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDV-AKA-------TRKLDDLAERVGWRWRLV 470 (681)
T ss_dssp HHHTTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCH-HHH-------HHHHHHHHHHHCCCHHHH
T ss_pred hhcccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCH-HHH-------HHHHHHHhccCcchHHHH
Confidence 34488999999999999999 88899999999999999877522 111 455677999999999988
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCccc
Q 037237 129 FLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYDTLL 167 (1267)
Q Consensus 129 ~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp~~ 167 (1267)
...|.+++.+++ |++|+...++||.+ +|.++..
T Consensus 471 ~~lg~~~~~~g~-----~~~A~~~~~~al~l-~P~~~~~ 503 (681)
T 2pzi_A 471 WYRAVAELLTGD-----YDSATKHFTEVLDT-FPGELAP 503 (681)
T ss_dssp HHHHHHHHHHTC-----HHHHHHHHHHHHHH-STTCSHH
T ss_pred HHHHHHHHHcCC-----HHHHHHHHHHHHHh-CCCChHH
Confidence 899999888875 89999999999998 5665443
No 84
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=91.25 E-value=0.42 Score=48.75 Aligned_cols=97 Identities=15% Similarity=0.135 Sum_probs=77.2
Q ss_pred HHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHH
Q 037237 50 NNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSF 129 (1267)
Q Consensus 50 ~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~ 129 (1267)
..-...|.-.+..|++.+|++.++.++..+|..+.++..-|.++..+. +. +-- +..+.+|+...|+....-.
T Consensus 140 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~----~~-~~A---~~~~~~al~~~~~~~~~~~ 211 (258)
T 3uq3_A 140 EEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLM----SF-PEA---IADCNKAIEKDPNFVRAYI 211 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhC----CH-HHH---HHHHHHHHHhCHHHHHHHH
Confidence 344567777889999999999999999999998888888888887654 22 111 3445668899999988888
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 130 LHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 130 f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
..|..++.+++ |++|+.-.++++.+
T Consensus 212 ~l~~~~~~~g~-----~~~A~~~~~~a~~~ 236 (258)
T 3uq3_A 212 RKATAQIAVKE-----YASALETLDAARTK 236 (258)
T ss_dssp HHHHHHHHTTC-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh-----HHHHHHHHHHHHHh
Confidence 88888888775 78999989888887
No 85
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=90.80 E-value=0.38 Score=48.37 Aligned_cols=97 Identities=14% Similarity=0.082 Sum_probs=74.2
Q ss_pred HHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHH
Q 037237 52 EGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLH 131 (1267)
Q Consensus 52 e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~ 131 (1267)
-...|...+..|++.+|++..++++ +.++.++..-|.+++.+. +. +-- +..+.+|+.+.|+....-...
T Consensus 9 ~~~~g~~~~~~~~~~~A~~~~~~a~---~~~~~~~~~lg~~~~~~g----~~-~~A---~~~~~~al~~~~~~~~~~~~l 77 (213)
T 1hh8_A 9 LWNEGVLAADKKDWKGALDAFSAVQ---DPHSRICFNIGCMYTILK----NM-TEA---EKAFTRSINRDKHLAVAYFQR 77 (213)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSS---SCCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHc---CCChHHHHHHHHHHHHcC----CH-HHH---HHHHHHHHHhCccchHHHHHH
Confidence 4567888999999999999999886 335677777777776643 22 111 445667999999998888888
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCc
Q 037237 132 AALLYKLAEINDKEWDVVIEACERMLKIGDPYDT 165 (1267)
Q Consensus 132 A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp 165 (1267)
|.+++.+++ |++|+...++++.+ .|.++
T Consensus 78 g~~~~~~~~-----~~~A~~~~~~al~~-~~~~~ 105 (213)
T 1hh8_A 78 GMLYYQTEK-----YDLAIKDLKEALIQ-LRGNQ 105 (213)
T ss_dssp HHHHHHTTC-----HHHHHHHHHHHHHT-TTTCS
T ss_pred HHHHHHccc-----HHHHHHHHHHHHHh-CCCcc
Confidence 888888775 89999999999998 35544
No 86
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=90.56 E-value=0.39 Score=59.31 Aligned_cols=108 Identities=7% Similarity=-0.096 Sum_probs=82.6
Q ss_pred HHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHH------------HHhCCCcchhhhh-------
Q 037237 50 NNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLA------------EKAGKGTDTQLEH------- 110 (1267)
Q Consensus 50 ~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA------------~~~~~~~~~k~~~------- 110 (1267)
..-..+|..+++.|++.+|++.++..+..+|+.+.+|...|.+++.+. -.+ +|.+....+
T Consensus 434 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l-~P~~~~~~~~lg~~~~ 512 (681)
T 2pzi_A 434 ELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDT-FPGELAPKLALAATAE 512 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-STTCSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCChHHHHHHHHHHH
Confidence 345677888899999999999999999999999999999999887643 122 221111111
Q ss_pred -------hhhhhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 111 -------LTTAASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 111 -------l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
+..+++|+.+.|+........|.+++.+|+ |++|+..+++|+.+ +|.+
T Consensus 513 ~~g~~~~~~~~~~al~~~P~~~~a~~~lg~~~~~~g~-----~~~A~~~~~~al~l-~P~~ 567 (681)
T 2pzi_A 513 LAGNTDEHKFYQTVWSTNDGVISAAFGLARARSAEGD-----RVGAVRTLDEVPPT-SRHF 567 (681)
T ss_dssp HHTCCCTTCHHHHHHHHCTTCHHHHHHHHHHHHHTTC-----HHHHHHHHHTSCTT-STTH
T ss_pred HcCChHHHHHHHHHHHhCCchHHHHHHHHHHHHHcCC-----HHHHHHHHHhhccc-Cccc
Confidence 334678899999998888888888888775 79999999999987 4543
No 87
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=90.41 E-value=0.5 Score=40.57 Aligned_cols=81 Identities=12% Similarity=-0.008 Sum_probs=61.1
Q ss_pred HHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHH
Q 037237 50 NNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSF 129 (1267)
Q Consensus 50 ~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~ 129 (1267)
..-...|...+..|++.+|++..+..+..+|..+.++..-|.++..+. +. +-- +..+.+|+.+.|+....-.
T Consensus 10 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~----~~-~~A---~~~~~~a~~~~p~~~~~~~ 81 (91)
T 1na3_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQG----DY-DEA---IEYYQKALELDPNNAEAKQ 81 (91)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh----hH-HHH---HHHHHHHHhcCCCCHHHHH
Confidence 444567788899999999999999999999998888888888887653 22 111 3445678999999887766
Q ss_pred HHHHHHHHH
Q 037237 130 LHAALLYKL 138 (1267)
Q Consensus 130 f~A~lL~~l 138 (1267)
..|.++..+
T Consensus 82 ~l~~~~~~~ 90 (91)
T 1na3_A 82 NLGNAKQKQ 90 (91)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 666665543
No 88
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=90.40 E-value=0.6 Score=41.92 Aligned_cols=94 Identities=16% Similarity=0.144 Sum_probs=70.2
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHH
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHA 132 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A 132 (1267)
...|.-.+..|++.+|++.+++++...|..+.++..-|.++.... +. +-- +..+.+++...|+........|
T Consensus 39 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~-~~A---~~~~~~~~~~~~~~~~~~~~la 110 (136)
T 2fo7_A 39 YNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQG----DY-DEA---IEYYQKALELDPRSAEAWYNLG 110 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTT----CH-HHH---HHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhc----CH-HHH---HHHHHHHHHhCCCChHHHHHHH
Confidence 345667788999999999999999888888877777777665432 22 111 3334557888898887777778
Q ss_pred HHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 133 ALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 133 ~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
.+++.+++ |++|+...++++.+
T Consensus 111 ~~~~~~~~-----~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 111 NAYYKQGD-----YDEAIEYYQKALEL 132 (136)
T ss_dssp HHHHTTTC-----HHHHHHHHHHHHHH
T ss_pred HHHHHHcc-----HHHHHHHHHHHHcc
Confidence 77777664 79999999998876
No 89
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=90.33 E-value=0.79 Score=52.09 Aligned_cols=99 Identities=10% Similarity=0.031 Sum_probs=80.1
Q ss_pred HHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhH
Q 037237 49 INNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELS 128 (1267)
Q Consensus 49 i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a 128 (1267)
+..-..+|..+++.|++.+|++..++++..+| .+.++..-|.+++++. +. +-- +..+.+|+.+.|+....-
T Consensus 6 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~la~~~~~~g----~~-~~A---~~~~~~al~~~p~~~~~~ 76 (514)
T 2gw1_A 6 ALALKDKGNQFFRNKKYDDAIKYYNWALELKE-DPVFYSNLSACYVSVG----DL-KKV---VEMSTKALELKPDYSKVL 76 (514)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHT----CH-HHH---HHHHHHHHHHCSCCHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc-cHHHHHhHHHHHHHHh----hH-HHH---HHHHHHHhccChHHHHHH
Confidence 44556788999999999999999999999998 4777888888887764 22 111 444667899999999888
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHHhccCC
Q 037237 129 FLHAALLYKLAEINDKEWDVVIEACERMLKIGD 161 (1267)
Q Consensus 129 ~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~ 161 (1267)
...|..++.+++ |++|+...++++.+..
T Consensus 77 ~~l~~~~~~~g~-----~~~A~~~~~~~~~~~~ 104 (514)
T 2gw1_A 77 LRRASANEGLGK-----FADAMFDLSVLSLNGD 104 (514)
T ss_dssp HHHHHHHHHTTC-----HHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHhh-----HHHHHHHHHHHHhcCC
Confidence 888999888875 8999999999999853
No 90
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=90.32 E-value=0.66 Score=54.44 Aligned_cols=105 Identities=13% Similarity=-0.009 Sum_probs=82.2
Q ss_pred HHHHHHHhHhhc---------CCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhh---hhhhhhhh
Q 037237 51 NEGLRALSAFQS---------GDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEH---LTTAASAV 118 (1267)
Q Consensus 51 ~e~~~a~~~~~~---------Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~---l~~~~~Av 118 (1267)
.-...|.-+.+. |++.+|++..++.+..+|+.+.++..-|.++..+.-..... .-.| +..+++|+
T Consensus 172 ~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~---~g~~~~A~~~~~~al 248 (474)
T 4abn_A 172 SLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQN---PKISQQALSAYAQAE 248 (474)
T ss_dssp HHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCC---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccc---cchHHHHHHHHHHHH
Confidence 334455556666 99999999999999999999999999999998873322221 1122 66788899
Q ss_pred ccCC---chhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 119 GRFP---NLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 119 ~l~p---~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
.+.| +....-...|.+++.+++ |++|+...++|+.+ +|.+
T Consensus 249 ~~~p~~~~~~~~~~~lg~~~~~~g~-----~~~A~~~~~~al~l-~p~~ 291 (474)
T 4abn_A 249 KVDRKASSNPDLHLNRATLHKYEES-----YGEALEGFSQAAAL-DPAW 291 (474)
T ss_dssp HHCGGGGGCHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHH-CTTC
T ss_pred HhCCCcccCHHHHHHHHHHHHHcCC-----HHHHHHHHHHHHHh-CCCC
Confidence 9999 888888888888888775 89999999999998 3544
No 91
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=90.30 E-value=0.39 Score=49.01 Aligned_cols=102 Identities=20% Similarity=0.187 Sum_probs=71.4
Q ss_pred HHHHHHHHHhHhhcCCHHHHHHHHHHHHhhC--------------------------CCCchhhhhhhHHHHHHHHHhCC
Q 037237 49 INNEGLRALSAFQSGDSKKALEMIKESISSH--------------------------QDSPHLHCLEAFIHHSLAEKAGK 102 (1267)
Q Consensus 49 i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h--------------------------~~s~~~h~~qg~v~~~lA~~~~~ 102 (1267)
...-...|.-.+..|++.+|++.++..+..+ |..+.++...|.+++... +
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 154 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKS----D 154 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTT----C
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhc----C
Confidence 4455566777788899999999999888744 344444455555444332 1
Q ss_pred CcchhhhhhhhhhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 103 GTDTQLEHLTTAASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 103 ~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
. +-- +..+.+|+...|++..+....|.+++.+++ |++|+..+++++.+ +|.+
T Consensus 155 ~-~~A---~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~-----~~~A~~~~~~al~~-~~~~ 206 (258)
T 3uq3_A 155 W-PNA---VKAYTEMIKRAPEDARGYSNRAAALAKLMS-----FPEAIADCNKAIEK-DPNF 206 (258)
T ss_dssp H-HHH---HHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHH-CTTC
T ss_pred H-HHH---HHHHHHHHhcCcccHHHHHHHHHHHHHhCC-----HHHHHHHHHHHHHh-CHHH
Confidence 1 111 445677899999998888888888887775 89999999999998 3543
No 92
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=90.29 E-value=0.43 Score=56.76 Aligned_cols=101 Identities=11% Similarity=0.088 Sum_probs=80.8
Q ss_pred HHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHH
Q 037237 51 NEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFL 130 (1267)
Q Consensus 51 ~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f 130 (1267)
.-...|..+++.|++.+|++..+..+..+|+.+.++..-|.++..+. +. +-- +..+++|+.+.|++...-..
T Consensus 25 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g----~~-~~A---~~~~~~al~~~p~~~~~~~~ 96 (568)
T 2vsy_A 25 AWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQ----RH-AEA---AVLLQQASDAAPEHPGIALW 96 (568)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCC----CH-HHH---HHHHHHHHhcCCCCHHHHHH
Confidence 44566777888999999999999999999999999988888887764 22 111 44467799999999888888
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCc
Q 037237 131 HAALLYKLAEINDKEWDVVIEACERMLKIGDPYDT 165 (1267)
Q Consensus 131 ~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp 165 (1267)
.|.+++.+++ |++|+...++|+.+ +|.++
T Consensus 97 la~~~~~~g~-----~~~A~~~~~~al~~-~p~~~ 125 (568)
T 2vsy_A 97 LGHALEDAGQ-----AEAAAAAYTRAHQL-LPEEP 125 (568)
T ss_dssp HHHHHHHTTC-----HHHHHHHHHHHHHH-CTTCH
T ss_pred HHHHHHHcCC-----HHHHHHHHHHHHHh-CCCCH
Confidence 8888888775 79999999999998 45543
No 93
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=90.15 E-value=0.52 Score=46.96 Aligned_cols=95 Identities=14% Similarity=0.084 Sum_probs=69.5
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhc--cCCchhhhHHH
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVG--RFPNLVELSFL 130 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~--l~p~s~~~a~f 130 (1267)
...|.-.+..|++.+|++.++..+...|..+.++..-|.++.... .+. +-- +..+.+++. ..|+.......
T Consensus 46 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~---~~~-~~A---~~~~~~~~~~~~~~~~~~~~~~ 118 (225)
T 2vq2_A 46 LVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRL---NRP-AES---MAYFDKALADPTYPTPYIANLN 118 (225)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTT---CCH-HHH---HHHHHHHHTSTTCSCHHHHHHH
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhc---CcH-HHH---HHHHHHHHcCcCCcchHHHHHH
Confidence 445666788999999999999999888988888888777776541 222 222 233444666 66777777777
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 131 HAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 131 ~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
.|..++.+++ |++|+.-..+++..
T Consensus 119 l~~~~~~~~~-----~~~A~~~~~~~~~~ 142 (225)
T 2vq2_A 119 KGICSAKQGQ-----FGLAEAYLKRSLAA 142 (225)
T ss_dssp HHHHHHHTTC-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHcCC-----HHHHHHHHHHHHHh
Confidence 7777777664 79999999999887
No 94
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=90.04 E-value=0.44 Score=52.20 Aligned_cols=95 Identities=8% Similarity=0.099 Sum_probs=76.1
Q ss_pred HHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHH
Q 037237 52 EGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLH 131 (1267)
Q Consensus 52 e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~ 131 (1267)
-...|.-..+.|++.+|++.++..+..+|..+.++..-|.++..+. +. +-- +..+.+|+.+.|+....-...
T Consensus 216 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g----~~-~~A---~~~~~~al~~~p~~~~~~~~l 287 (365)
T 4eqf_A 216 QTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGD----RS-EEA---VEAYTRALEIQPGFIRSRYNL 287 (365)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC----CH-HHH---HHHHHHHHhcCCCchHHHHHH
Confidence 3455666778899999999999999999998888888888887654 22 111 444667999999998888888
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 132 AALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 132 A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
|.+++.+|+ |++|+...++|+.+
T Consensus 288 ~~~~~~~g~-----~~~A~~~~~~al~~ 310 (365)
T 4eqf_A 288 GISCINLGA-----YREAVSNFLTALSL 310 (365)
T ss_dssp HHHHHHHTC-----CHHHHHHHHHHHHH
T ss_pred HHHHHHCCC-----HHHHHHHHHHHHHh
Confidence 888888886 69999999999988
No 95
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=89.96 E-value=0.1 Score=51.50 Aligned_cols=94 Identities=13% Similarity=0.099 Sum_probs=68.2
Q ss_pred hHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHHHHH-
Q 037237 58 SAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAALLY- 136 (1267)
Q Consensus 58 ~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~lL~- 136 (1267)
..+..|++.+|+..++..+..+|..+.++..-|.+++... +. +.- +..+.+|+.+.|++..+-...|.+||
T Consensus 19 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~----~~-~~A---~~~~~~al~~~p~~~~~~~~la~~l~~ 90 (177)
T 2e2e_A 19 QFASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQN----DY-SNS---LLAYRQALQLRGENAELYAALATVLYY 90 (177)
T ss_dssp CCC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHHCSCHHHHHHHHHHHHH
T ss_pred hhhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC----CH-HHH---HHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999887654 22 111 44567799999999888778888744
Q ss_pred HHHhhhchhH--HHHHHHHHHHhccCCCCCc
Q 037237 137 KLAEINDKEW--DVVIEACERMLKIGDPYDT 165 (1267)
Q Consensus 137 ~la~~~~~~Y--~~a~~ec~RaL~i~~P~dp 165 (1267)
..+ .| ++|+...++++.+ +|.++
T Consensus 91 ~~~-----~~~~~~A~~~~~~al~~-~p~~~ 115 (177)
T 2e2e_A 91 QAS-----QHMTAQTRAMIDKALAL-DSNEI 115 (177)
T ss_dssp HTT-----TCCCHHHHHHHHHHHHH-CTTCH
T ss_pred hcC-----CcchHHHHHHHHHHHHh-CCCcH
Confidence 444 36 9999999999988 46543
No 96
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=89.92 E-value=0.79 Score=47.09 Aligned_cols=44 Identities=5% Similarity=-0.010 Sum_probs=27.2
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHh--hCCCCchhhhhhhHHHHHH
Q 037237 53 GLRALSAFQSGDSKKALEMIKESIS--SHQDSPHLHCLEAFIHHSL 96 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~--~h~~s~~~h~~qg~v~~~l 96 (1267)
...|.-.+..|++.+|++.++.++. .+|..+.++..-|.+++.+
T Consensus 109 ~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 154 (252)
T 2ho1_A 109 NNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQM 154 (252)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHc
Confidence 3445556667777777777777766 4555566666666665543
No 97
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=89.70 E-value=0.26 Score=55.32 Aligned_cols=108 Identities=14% Similarity=0.113 Sum_probs=70.8
Q ss_pred HHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhh-----------HHHHHHHHHh---CCCcchhhhhhhhh
Q 037237 49 INNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEA-----------FIHHSLAEKA---GKGTDTQLEHLTTA 114 (1267)
Q Consensus 49 i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg-----------~v~~~lA~~~---~~~~~~k~~~l~~~ 114 (1267)
...-..++..+++.|++.+|+...+..+...|..+.. ...| .+++.+|... .+. +-- +..+
T Consensus 179 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~-~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~-~~A---~~~~ 253 (338)
T 2if4_A 179 ADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMF-QLYGKYQDMALAVKNPCHLNIAACLIKLKRY-DEA---IGHC 253 (338)
T ss_dssp HHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHH-TCCHHHHHHHHHHHTHHHHHHHHHHHTTTCC-HHH---HHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhh-hhcccHHHHHHHHHHHHHHHHHHHHHHcCCH-HHH---HHHH
Confidence 3444567888899999999999999999877765421 0111 1333443222 122 111 5557
Q ss_pred hhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCccc
Q 037237 115 ASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYDTLL 167 (1267)
Q Consensus 115 ~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp~~ 167 (1267)
.+|+.+.|+....-...|.+++.+++ |++|+...++||.+ +|.++..
T Consensus 254 ~~al~~~p~~~~a~~~lg~a~~~~g~-----~~~A~~~l~~al~l-~p~~~~a 300 (338)
T 2if4_A 254 NIVLTEEEKNPKALFRRGKAKAELGQ-----MDSARDDFRKAQKY-APDDKAI 300 (338)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHTTTC-----HHHHHHHHHHTTC---------
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCC-----HHHHHHHHHHHHHH-CCCCHHH
Confidence 78999999999888888888888775 89999999999998 4655433
No 98
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=89.64 E-value=0.25 Score=49.19 Aligned_cols=41 Identities=7% Similarity=0.085 Sum_probs=21.7
Q ss_pred hhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 114 AASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 114 ~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
+++|+...|++...-...|.+++.+|+ |++|+...++++..
T Consensus 29 ~~~al~~~P~~~~a~~~la~~~~~~g~-----~~~A~~~~~~a~~~ 69 (176)
T 2r5s_A 29 IQTLSDELQSRGDVKLAKADCLLETKQ-----FELAQELLATIPLE 69 (176)
T ss_dssp HHTSCHHHHTSHHHHHHHHHHHHHTTC-----HHHHHHHHTTCCGG
T ss_pred HHHHHHHCCCcHHHHHHHHHHHHHCCC-----HHHHHHHHHHhhhc
Confidence 344555555555555555555555443 45555555555444
No 99
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=89.60 E-value=0.79 Score=51.45 Aligned_cols=99 Identities=19% Similarity=0.213 Sum_probs=79.4
Q ss_pred HHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHH
Q 037237 52 EGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLH 131 (1267)
Q Consensus 52 e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~ 131 (1267)
....|...++.|++.+|++..+.++...|..+.++..-|.++.++. +. +-- +..+.+++...|+........
T Consensus 146 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g----~~-~~A---~~~~~~~~~~~~~~~~~~~~l 217 (450)
T 2y4t_A 146 LRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELRELRAECFIKEG----EP-RKA---ISDLKAASKLKNDNTEAFYKI 217 (450)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CG-GGG---HHHHHHHHHHHCSCHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCC----CH-HHH---HHHHHHHHHhCCCCHHHHHHH
Confidence 4456788999999999999999999999999999999998887764 22 111 344566888899999888888
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 132 AALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 132 A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
|.+++.+++ |++|+...++++.+ .|.+
T Consensus 218 ~~~~~~~g~-----~~~A~~~~~~~~~~-~p~~ 244 (450)
T 2y4t_A 218 STLYYQLGD-----HELSLSEVRECLKL-DQDH 244 (450)
T ss_dssp HHHHHHTTC-----HHHHHHHHHHHHHH-CTTC
T ss_pred HHHHHHcCC-----HHHHHHHHHHHHHh-CCCh
Confidence 888888775 79999999999987 3543
No 100
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=89.59 E-value=0.68 Score=50.28 Aligned_cols=96 Identities=11% Similarity=0.053 Sum_probs=74.0
Q ss_pred HHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHH
Q 037237 51 NEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFL 130 (1267)
Q Consensus 51 ~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f 130 (1267)
.-...|.-.++.|++.+|++.++.++..+|..+.++..-|.++..+. +. +-- +..+.+|+.+.|+....-..
T Consensus 219 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g----~~-~~A---~~~~~~al~~~~~~~~~~~~ 290 (368)
T 1fch_A 219 VQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGN----QS-EEA---VAAYRRALELQPGYIRSRYN 290 (368)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcC----CH-HHH---HHHHHHHHHhCCCcHHHHHH
Confidence 33456666778899999999999998888888888888887776643 22 111 44456688899999888888
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 131 HAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 131 ~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
.|.+++.+++ |++|+...++++.+
T Consensus 291 l~~~~~~~g~-----~~~A~~~~~~al~~ 314 (368)
T 1fch_A 291 LGISCINLGA-----HREAVEHFLEALNM 314 (368)
T ss_dssp HHHHHHHHTC-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHCCC-----HHHHHHHHHHHHHh
Confidence 8888888775 79999999999987
No 101
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=89.54 E-value=0.57 Score=54.97 Aligned_cols=104 Identities=10% Similarity=-0.010 Sum_probs=77.1
Q ss_pred HHHHHHHhHhhcCCH-HHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHH
Q 037237 51 NEGLRALSAFQSGDS-KKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSF 129 (1267)
Q Consensus 51 ~e~~~a~~~~~~Gnh-~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~ 129 (1267)
.-..+|..+++.|++ .+|++..+..+...|+.+.++..-|.+++.+. +. +-- +..+++|+.+.|+ ...-.
T Consensus 104 ~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g----~~-~~A---~~~~~~al~~~p~-~~~~~ 174 (474)
T 4abn_A 104 ALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKG----DV-TSA---HTCFSGALTHCKN-KVSLQ 174 (474)
T ss_dssp HHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT----CH-HHH---HHHHHHHHTTCCC-HHHHH
T ss_pred HHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC----CH-HHH---HHHHHHHHhhCCC-HHHHH
Confidence 344566677789999 99999999999999999999999999988774 22 111 4456779999999 45555
Q ss_pred HHHHHHHHH--Hhhh--chhHHHHHHHHHHHhccCCCCC
Q 037237 130 LHAALLYKL--AEIN--DKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 130 f~A~lL~~l--a~~~--~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
..|.+++.+ +... ...|++|+...++|+.+ +|.+
T Consensus 175 ~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-~p~~ 212 (474)
T 4abn_A 175 NLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM-DVLD 212 (474)
T ss_dssp HHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH-CTTC
T ss_pred HHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh-CCCC
Confidence 677777766 0000 02589999999999998 4554
No 102
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=89.47 E-value=0.81 Score=51.94 Aligned_cols=111 Identities=17% Similarity=0.112 Sum_probs=79.2
Q ss_pred hhHHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhh
Q 037237 47 PEINNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVE 126 (1267)
Q Consensus 47 ~~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~ 126 (1267)
+.+-.+..-|+-.+.+|++.+|++..+..+...|+.+-+|..-|.+.+.+...-+.. ..++.+++|+.+.|+...
T Consensus 136 ~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~-----~al~~~~~al~l~p~~~~ 210 (472)
T 4g1t_A 136 PELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQ-----NAIDPLRQAIRLNPDNQY 210 (472)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCC-----CTHHHHHHHHHHCSSCHH
T ss_pred HHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHH-----HHHHHHHHHhhcCCcchH
Confidence 445555555666677889999999999999999999999999999888876432111 126667889999999988
Q ss_pred hHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 127 LSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 127 ~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
.-...+..+..++.. ...|+++++-.++|+.+ +|..
T Consensus 211 ~~~~l~~~~~~~~~~-~~~~~~a~~~~~~al~~-~~~~ 246 (472)
T 4g1t_A 211 LKVLLALKLHKMREE-GEEEGEGEKLVEEALEK-APGV 246 (472)
T ss_dssp HHHHHHHHHHHCC-------CHHHHHHHHHHHH-CSSC
T ss_pred HHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHh-CccH
Confidence 777777776666655 44678888888888877 3443
No 103
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=89.09 E-value=0.44 Score=49.11 Aligned_cols=101 Identities=14% Similarity=0.046 Sum_probs=71.1
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCc------------hhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhcc
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSP------------HLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGR 120 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~------------~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l 120 (1267)
..++...|..|++..|++--...+...|..| .+|.--|.++.++.+- +.. +..+.+|+++
T Consensus 15 ~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~-~eA-------l~~~~kAL~l 86 (159)
T 2hr2_A 15 LSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSF-DEA-------LHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCH-HHH-------HHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCH-HHH-------HHHHHHHHHh
Confidence 4667788999999999999999997777632 1444444444444311 111 6667777777
Q ss_pred -------CCchhhhH----HHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCccc
Q 037237 121 -------FPNLVELS----FLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYDTLL 167 (1267)
Q Consensus 121 -------~p~s~~~a----~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp~~ 167 (1267)
.|+....- .-.+..|..|+. |++|+.-.++||.+ +|.|.+-
T Consensus 87 ~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr-----~eEAl~~y~kAlel-~p~d~~~ 138 (159)
T 2hr2_A 87 FNRRGELNQDEGKLWISAVYSRALALDGLGR-----GAEAMPEFKKVVEM-IEERKGE 138 (159)
T ss_dssp HHHHCCTTSTHHHHHHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHH-HHHCCSC
T ss_pred hhccccCCCchHHHHHHHHHhHHHHHHHCCC-----HHHHHHHHHHHHhc-CCCcHHH
Confidence 99876655 556666666664 89999999999999 5666554
No 104
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=89.06 E-value=0.76 Score=48.65 Aligned_cols=95 Identities=12% Similarity=0.104 Sum_probs=74.6
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHH
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHA 132 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A 132 (1267)
...|.-.+..|++.+|++.++.++..+|..+.++..-|.++.... +. +.- +..+.+|+.+.|+........|
T Consensus 176 ~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~-~~A---~~~~~~a~~~~~~~~~~~~~l~ 247 (327)
T 3cv0_A 176 ASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGN----RP-QEA---LDAYNRALDINPGYVRVMYNMA 247 (327)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC----CH-HHH---HHHHHHHHHcCCCCHHHHHHHH
Confidence 445566678899999999999999888988888888888887643 22 111 3445668899999988888888
Q ss_pred HHHHHHHhhhchhHHHHHHHHHHHhccC
Q 037237 133 ALLYKLAEINDKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 133 ~lL~~la~~~~~~Y~~a~~ec~RaL~i~ 160 (1267)
.+++.+++ |++|+...++++.+.
T Consensus 248 ~~~~~~g~-----~~~A~~~~~~a~~~~ 270 (327)
T 3cv0_A 248 VSYSNMSQ-----YDLAAKQLVRAIYMQ 270 (327)
T ss_dssp HHHHHTTC-----HHHHHHHHHHHHHHH
T ss_pred HHHHHhcc-----HHHHHHHHHHHHHhC
Confidence 88887775 799999999999883
No 105
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=89.02 E-value=0.64 Score=41.11 Aligned_cols=67 Identities=18% Similarity=0.132 Sum_probs=54.5
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCch-hhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhh
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPH-LHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVEL 127 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~-~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~ 127 (1267)
.++|...++.|++.+|++..+.++..+|.++. ++..-|.+++.+. +. +-- +..+.+|+.+.|+....
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~----~~-~~A---~~~~~~al~~~p~~~~~ 71 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLG----DW-QKA---LNNYQSAIELNPDSPAL 71 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHT----CH-HHH---HHHHHHHHHHCTTSTHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcC----CH-HHH---HHHHHHHHhcCCCcHHH
Confidence 46788899999999999999999999999998 9999999988764 22 111 44567799999998764
No 106
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=88.88 E-value=0.51 Score=49.57 Aligned_cols=100 Identities=16% Similarity=0.164 Sum_probs=65.9
Q ss_pred hhHHHHHHHHHhHhhcCCHHHHHHHHHHHHhh--------CCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhh
Q 037237 47 PEINNEGLRALSAFQSGDSKKALEMIKESISS--------HQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAV 118 (1267)
Q Consensus 47 ~~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~--------h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av 118 (1267)
..+..-...|...+..|++.+|+...++.+.. ++..+.++..-|.+++.+. +. +.-..+ +.+|+
T Consensus 25 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g----~~-~~A~~~---~~~al 96 (311)
T 3nf1_A 25 ARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQN----KY-KDAANL---LNDAL 96 (311)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTT----CH-HHHHHH---HHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCC----CH-HHHHHH---HHHHH
Confidence 66777888899999999999999999999873 4555666667777766543 22 222222 33355
Q ss_pred ccC--------CchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 119 GRF--------PNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 119 ~l~--------p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
.++ |.....-...|.+++.++ .|++|+.-.++++.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g-----~~~~A~~~~~~a~~~ 140 (311)
T 3nf1_A 97 AIREKTLGKDHPAVAATLNNLAVLYGKRG-----KYKEAEPLCKRALEI 140 (311)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHHTTT-----CHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCChHHHHHHHHHHHHHHHcC-----cHHHHHHHHHHHHHH
Confidence 443 333444445555555554 378888888888876
No 107
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=88.07 E-value=0.87 Score=49.84 Aligned_cols=93 Identities=11% Similarity=-0.019 Sum_probs=70.0
Q ss_pred hcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHHHHHHHHh
Q 037237 61 QSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAALLYKLAE 140 (1267)
Q Consensus 61 ~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~lL~~la~ 140 (1267)
..|++.+|+.+.++++..+|.++.++...|.++.++.+-- .. +..+++|+.+.|+....-.-.+.++..+|+
T Consensus 178 ~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~-eA-------~~~l~~al~~~p~~~~~l~~l~~~~~~~g~ 249 (291)
T 3mkr_A 178 GGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWE-AA-------EGVLQEALDKDSGHPETLINLVVLSQHLGK 249 (291)
T ss_dssp CTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHH-HH-------HHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHH-HH-------HHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 3589999999999999999999999999999888776331 11 445677999999999887777777777665
Q ss_pred hhchhHHHHH-HHHHHHhccCCCCCccc
Q 037237 141 INDKEWDVVI-EACERMLKIGDPYDTLL 167 (1267)
Q Consensus 141 ~~~~~Y~~a~-~ec~RaL~i~~P~dp~~ 167 (1267)
+.+++ +--++++.+ +|.+|.-
T Consensus 250 -----~~eaa~~~~~~~~~~-~P~~~~~ 271 (291)
T 3mkr_A 250 -----PPEVTNRYLSQLKDA-HRSHPFI 271 (291)
T ss_dssp -----CHHHHHHHHHHHHHH-CTTCHHH
T ss_pred -----CHHHHHHHHHHHHHh-CCCChHH
Confidence 34444 444666666 6877655
No 108
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=87.96 E-value=1.1 Score=42.67 Aligned_cols=101 Identities=16% Similarity=0.044 Sum_probs=72.4
Q ss_pred HHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHH
Q 037237 52 EGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLH 131 (1267)
Q Consensus 52 e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~ 131 (1267)
-...|.-.+..|++.+|++..+..+..+|..+.++..-|.++..+. +. +-- +..+.+|+.+.|+.......+
T Consensus 50 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~----~~-~~A---~~~~~~a~~~~p~~~~~~~~~ 121 (166)
T 1a17_A 50 YGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALG----KF-RAA---LRDYETVVKVKPHDKDAKMKY 121 (166)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHSTTCHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhc----cH-HHH---HHHHHHHHHhCCCCHHHHHHH
Confidence 3456777788999999999999999999999988888888887654 22 111 344567899999988766555
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHhccCCCC
Q 037237 132 AALLYKLAEINDKEWDVVIEACERMLKIGDPY 163 (1267)
Q Consensus 132 A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~ 163 (1267)
+.....++ ...|++|+..-.++..+.++.
T Consensus 122 ~~~~~~~~---~~~~~~A~~~~~~~~~~~~~~ 150 (166)
T 1a17_A 122 QECNKIVK---QKAFERAIAGDEHKRSVVDSL 150 (166)
T ss_dssp HHHHHHHH---HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH---HHHHHHHHHcccchHHHhccc
Confidence 55533332 135888888887777664433
No 109
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=87.94 E-value=1.3 Score=45.90 Aligned_cols=100 Identities=6% Similarity=0.005 Sum_probs=73.1
Q ss_pred HHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHH
Q 037237 51 NEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFL 130 (1267)
Q Consensus 51 ~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f 130 (1267)
.-...|.-....|++.+|++..+.++..+|..+.++..-|.++..+. +. +.- +..+.+|+.+.|+....-..
T Consensus 76 ~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~----~~-~~A---~~~~~~al~~~~~~~~~~~~ 147 (272)
T 3u4t_A 76 DFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKG----NF-PLA---IQYMEKQIRPTTTDPKVFYE 147 (272)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTT----CH-HHH---HHHHGGGCCSSCCCHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcc----CH-HHH---HHHHHHHhhcCCCcHHHHHH
Confidence 34566777788888888888888888888888888887787776653 21 111 44567799999999887777
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 131 HAALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 131 ~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
.|..+|..+ .|++|+...++++.+ +|.+
T Consensus 148 l~~~~~~~~-----~~~~A~~~~~~a~~~-~p~~ 175 (272)
T 3u4t_A 148 LGQAYYYNK-----EYVKADSSFVKVLEL-KPNI 175 (272)
T ss_dssp HHHHHHHTT-----CHHHHHHHHHHHHHH-STTC
T ss_pred HHHHHHHHH-----HHHHHHHHHHHHHHh-Cccc
Confidence 774445433 599999999999998 3443
No 110
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=87.63 E-value=0.97 Score=50.04 Aligned_cols=91 Identities=12% Similarity=0.090 Sum_probs=53.6
Q ss_pred HHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHHHH
Q 037237 56 ALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAALL 135 (1267)
Q Consensus 56 a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~lL 135 (1267)
|.-.++.|++.+|++..+..+..+|..+.++..-|.++.+.. +. +-- +..+.+|+.+.|+........|.++
T Consensus 244 ~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g----~~-~~A---~~~~~~al~~~p~~~~~~~~l~~~~ 315 (388)
T 1w3b_A 244 ACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKG----SV-AEA---EDCYNTALRLCPTHADSLNNLANIK 315 (388)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHS----CH-HHH---HHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC----CH-HHH---HHHHHHHHhhCcccHHHHHHHHHHH
Confidence 333445566666666666666555555555555555444432 11 111 3345567777888777666666666
Q ss_pred HHHHhhhchhHHHHHHHHHHHhcc
Q 037237 136 YKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 136 ~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
...|+ |++|+.-.++++.+
T Consensus 316 ~~~g~-----~~~A~~~~~~al~~ 334 (388)
T 1w3b_A 316 REQGN-----IEEAVRLYRKALEV 334 (388)
T ss_dssp HTTTC-----HHHHHHHHHHHTTS
T ss_pred HHcCC-----HHHHHHHHHHHHhc
Confidence 65553 78888888888876
No 111
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=86.97 E-value=0.32 Score=37.84 Aligned_cols=27 Identities=22% Similarity=0.400 Sum_probs=25.1
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
.+||.|-+.|.+++.+..|.+.+|...
T Consensus 6 FiCP~C~~~l~s~~~L~~Hye~~H~~~ 32 (34)
T 3mjh_B 6 FICPQCMKSLGSADELFKHYEAVHDAG 32 (34)
T ss_dssp EECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred cCCcHHHHHcCCHHHHHHHHHhccccC
Confidence 689999999999999999999999764
No 112
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=86.71 E-value=0.99 Score=41.25 Aligned_cols=80 Identities=14% Similarity=-0.025 Sum_probs=63.5
Q ss_pred HHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHHHHHHHHhhhchhH
Q 037237 67 KALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAALLYKLAEINDKEW 146 (1267)
Q Consensus 67 kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y 146 (1267)
+|++.++..+..+|+.+.++..-|.+++.+. +. +-- +..+++|+.+.|+....-...|.+++.+|+ |
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g----~~-~~A---~~~~~~al~~~p~~~~~~~~la~~~~~~g~-----~ 69 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHE----QF-DAA---LPHLRAALDFDPTYSVAWKWLGKTLQGQGD-----R 69 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHHHHHHHHHHHHHHTC-----H
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcc----CH-HHH---HHHHHHHHHHCCCcHHHHHHHHHHHHHcCC-----H
Confidence 5778888998888999999999998887654 22 111 445677999999998888888888888775 7
Q ss_pred HHHHHHHHHHhcc
Q 037237 147 DVVIEACERMLKI 159 (1267)
Q Consensus 147 ~~a~~ec~RaL~i 159 (1267)
++|+...++|+.+
T Consensus 70 ~~A~~~~~~al~~ 82 (115)
T 2kat_A 70 AGARQAWESGLAA 82 (115)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988887
No 113
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=86.60 E-value=1.2 Score=51.28 Aligned_cols=49 Identities=18% Similarity=-0.001 Sum_probs=36.5
Q ss_pred hhhhhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCc
Q 037237 111 LTTAASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYDT 165 (1267)
Q Consensus 111 l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp 165 (1267)
+..+.+|+.+.|+....-...|.+++.+++ |++|+...++++.+ .|.++
T Consensus 330 ~~~~~~a~~~~~~~~~~~~~la~~~~~~g~-----~~~A~~~~~~~~~~-~~~~~ 378 (537)
T 3fp2_A 330 KEDFQKAQSLNPENVYPYIQLACLLYKQGK-----FTESEAFFNETKLK-FPTLP 378 (537)
T ss_dssp HHHHHHHHHHCTTCSHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHH-CTTCT
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCC-----HHHHHHHHHHHHHh-CCCCh
Confidence 444667888888888777777888777665 78888888888887 35543
No 114
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=86.28 E-value=0.82 Score=52.52 Aligned_cols=97 Identities=12% Similarity=0.058 Sum_probs=78.2
Q ss_pred HHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhH
Q 037237 49 INNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELS 128 (1267)
Q Consensus 49 i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a 128 (1267)
...-..+|..+++.|++.+|++..++++..+|+.+.++..-|.+++.+..- +.. +..+.+|+.+.|+.....
T Consensus 25 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~-~~A-------~~~~~~al~~~p~~~~~~ 96 (537)
T 3fp2_A 25 AVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDL-EKV-------IEFTTKALEIKPDHSKAL 96 (537)
T ss_dssp HHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCH-HHH-------HHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCH-HHH-------HHHHHHHHhcCCchHHHH
Confidence 344477899999999999999999999999999999999999999876521 111 555677999999999988
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 129 FLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 129 ~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
...|.+++.+|+ |++|+...+ ++.+
T Consensus 97 ~~la~~~~~~g~-----~~~A~~~~~-~~~~ 121 (537)
T 3fp2_A 97 LRRASANESLGN-----FTDAMFDLS-VLSL 121 (537)
T ss_dssp HHHHHHHHHHTC-----HHHHHHHHH-HHC-
T ss_pred HHHHHHHHHcCC-----HHHHHHHHH-HHhc
Confidence 889999888886 799988884 7765
No 115
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=85.46 E-value=1.5 Score=52.01 Aligned_cols=102 Identities=8% Similarity=0.064 Sum_probs=79.2
Q ss_pred HHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHH
Q 037237 52 EGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLH 131 (1267)
Q Consensus 52 e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~ 131 (1267)
-...|.-+.+.|++.+|++..+..+..+|+.+.++..-|.++.++.. . +-- +..+++|+.+.|+....-...
T Consensus 60 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~----~-~~A---~~~~~~al~~~p~~~~~~~~l 131 (568)
T 2vsy_A 60 VARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQ----A-EAA---AAAYTRAHQLLPEEPYITAQL 131 (568)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC----H-HHH---HHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCC----H-HHH---HHHHHHHHHhCCCCHHHHHHH
Confidence 34566677889999999999999999999999999888888876542 2 111 445677999999999888888
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 132 AALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 132 A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
|.+++.+++. ..|++|+...+++|... |..
T Consensus 132 ~~~~~~~~~~--g~~~~A~~~~~~al~~~-p~~ 161 (568)
T 2vsy_A 132 LNWRRRLCDW--RALDVLSAQVRAAVAQG-VGA 161 (568)
T ss_dssp HHHHHHTTCC--TTHHHHHHHHHHHHHHT-CCC
T ss_pred HHHHHHhhcc--ccHHHHHHHHHHHHhcC-Ccc
Confidence 8888887211 23899999999999983 443
No 116
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=85.44 E-value=0.25 Score=49.45 Aligned_cols=82 Identities=9% Similarity=-0.130 Sum_probs=63.6
Q ss_pred HHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHH
Q 037237 72 IKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIE 151 (1267)
Q Consensus 72 ~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ 151 (1267)
+++++...|+.+-+++..|.++++..+- +.. +..+++|+.+.|++...-...|..++.+++ |++|+.
T Consensus 25 l~~al~l~p~~~~~~~~lg~~~~~~g~~-~eA-------~~~~~~al~~~P~~~~~~~~lg~~~~~~g~-----~~~Ai~ 91 (151)
T 3gyz_A 25 LKDINAIPDDMMDDIYSYAYDFYNKGRI-EEA-------EVFFRFLCIYDFYNVDYIMGLAAIYQIKEQ-----FQQAAD 91 (151)
T ss_dssp TGGGCCSCHHHHHHHHHHHHHHHHTTCH-HHH-------HHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-----HHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHcCCH-HHH-------HHHHHHHHHhCCCCHHHHHHHHHHHHHHcc-----HHHHHH
Confidence 4455555677788888888888765422 111 555778999999999998899999988875 899999
Q ss_pred HHHHHhccCCCCCccc
Q 037237 152 ACERMLKIGDPYDTLL 167 (1267)
Q Consensus 152 ec~RaL~i~~P~dp~~ 167 (1267)
..++|+.+ +|.+|..
T Consensus 92 ~~~~al~l-~P~~~~~ 106 (151)
T 3gyz_A 92 LYAVAFAL-GKNDYTP 106 (151)
T ss_dssp HHHHHHHH-SSSCCHH
T ss_pred HHHHHHhh-CCCCcHH
Confidence 99999999 5776654
No 117
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=84.98 E-value=2.2 Score=48.29 Aligned_cols=102 Identities=13% Similarity=0.038 Sum_probs=77.9
Q ss_pred HHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCc----c----hhhhh---hhhhhhhhccCC
Q 037237 54 LRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGT----D----TQLEH---LTTAASAVGRFP 122 (1267)
Q Consensus 54 ~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~----~----~k~~~---l~~~~~Av~l~p 122 (1267)
..|.-....|++.+|++..+..+..+|+++.+|..-|.++...+....+.. . ....+ +....+|.++.|
T Consensus 252 ~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 331 (472)
T 4g1t_A 252 SAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKADEAND 331 (472)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhcCC
Confidence 345667789999999999999999999999999988988776543322110 0 00011 555778999999
Q ss_pred chhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccC
Q 037237 123 NLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 123 ~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~ 160 (1267)
+........|..++.+++ |++|+.-.++||.+.
T Consensus 332 ~~~~~~~~lg~~~~~~~~-----~~~A~~~~~kaL~~~ 364 (472)
T 4g1t_A 332 NLFRVCSILASLHALADQ-----YEEAEYYFQKEFSKE 364 (472)
T ss_dssp TTCCCHHHHHHHHHHTTC-----HHHHHHHHHHHHHSC
T ss_pred chhhhhhhHHHHHHHhcc-----HHHHHHHHHHHHhcC
Confidence 999888888888887775 899999999999984
No 118
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=84.92 E-value=2.6 Score=46.98 Aligned_cols=85 Identities=8% Similarity=0.025 Sum_probs=69.1
Q ss_pred HHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhH
Q 037237 49 INNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELS 128 (1267)
Q Consensus 49 i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a 128 (1267)
+..-...|.-+++.|++.+|++..+..+..+|+.+.+++.-|.+++.+..- +-- +..+++|+.+.|+....-
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~-----~~A---~~~~~~al~l~P~~~~a~ 267 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDF-----ELA---RADFQKVLQLYPNNKAAK 267 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH-----HHH---HHHHHHHHHHCSSCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCH-----HHH---HHHHHHHHHHCCCCHHHH
Confidence 455667888889999999999999999999999999999999988876522 111 445677999999999888
Q ss_pred HHHHHHHHHHHhh
Q 037237 129 FLHAALLYKLAEI 141 (1267)
Q Consensus 129 ~f~A~lL~~la~~ 141 (1267)
...|.++..+++.
T Consensus 268 ~~l~~~~~~~~~~ 280 (336)
T 1p5q_A 268 TQLAVCQQRIRRQ 280 (336)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8888888887763
No 119
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=84.54 E-value=1.7 Score=39.52 Aligned_cols=82 Identities=11% Similarity=-0.125 Sum_probs=61.9
Q ss_pred HHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHH
Q 037237 50 NNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSF 129 (1267)
Q Consensus 50 ~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~ 129 (1267)
..-...|.-.+..|++.+|++.++..+...|..+.++..-|.++..+. +. +-- +..+.++..+.|+......
T Consensus 51 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~----~~-~~A---~~~~~~~~~~~p~~~~~~~ 122 (133)
T 2lni_A 51 KLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMK----DY-TKA---MDVYQKALDLDSSCKEAAD 122 (133)
T ss_dssp HHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCGGGTHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHh----hH-HHH---HHHHHHHHHhCCCchHHHH
Confidence 334566777889999999999999999999998888888888887654 22 112 3345668889999888777
Q ss_pred HHHHHHHHHH
Q 037237 130 LHAALLYKLA 139 (1267)
Q Consensus 130 f~A~lL~~la 139 (1267)
..+.+++.++
T Consensus 123 ~l~~~~~~~~ 132 (133)
T 2lni_A 123 GYQRCMMAQY 132 (133)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 7777766554
No 120
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=84.04 E-value=1.8 Score=51.13 Aligned_cols=91 Identities=15% Similarity=0.049 Sum_probs=65.8
Q ss_pred HHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHH
Q 037237 51 NEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFL 130 (1267)
Q Consensus 51 ~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f 130 (1267)
.-...|.-+++.|++.+|++..+..+..+|..+.++..-|.++.++..- +.. +..+++|+.+.|+.......
T Consensus 42 ~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~-~eA-------~~~~~~al~~~p~~~~~~~~ 113 (477)
T 1wao_1 42 YYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKF-RAA-------LRDYETVVKVKPHDKDAKMK 113 (477)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCH-HHH-------HHHHHHHHHHSTTCTTHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH-HHH-------HHHHHHHHHhCCCCHHHHHH
Confidence 3445677788999999999999999999999999999889888876422 111 44567799999999877666
Q ss_pred HHHH--HHHHHhhhchhHHHHHHHHH
Q 037237 131 HAAL--LYKLAEINDKEWDVVIEACE 154 (1267)
Q Consensus 131 ~A~l--L~~la~~~~~~Y~~a~~ec~ 154 (1267)
.+.+ ++..+ .|++|++..+
T Consensus 114 l~~~~~~~~~g-----~~~~A~~~~~ 134 (477)
T 1wao_1 114 YQECNKIVKQK-----AFERAIAGDE 134 (477)
T ss_dssp HHHHHHHHHHH-----HHCCC-----
T ss_pred HHHHHHHHHHH-----HHHHHhcccc
Confidence 6666 44433 5899999888
No 121
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=83.79 E-value=2.6 Score=37.74 Aligned_cols=82 Identities=16% Similarity=-0.023 Sum_probs=62.8
Q ss_pred HHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHH
Q 037237 51 NEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFL 130 (1267)
Q Consensus 51 ~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f 130 (1267)
.-...|.-.+..|++.+|++.++.++..+|..+.++..-|.++..+. +. +.- +..+.+|+.+.|++......
T Consensus 48 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~A---~~~~~~~~~~~p~~~~~~~~ 119 (131)
T 2vyi_A 48 YFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLN----KH-VEA---VAYYKKALELDPDNETYKSN 119 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHSTTCHHHHHH
T ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhC----CH-HHH---HHHHHHHHhcCccchHHHHH
Confidence 34556777788999999999999999999998888888888877654 22 222 33356688999999887777
Q ss_pred HHHHHHHHHh
Q 037237 131 HAALLYKLAE 140 (1267)
Q Consensus 131 ~A~lL~~la~ 140 (1267)
.|.++..+++
T Consensus 120 l~~~~~~~~~ 129 (131)
T 2vyi_A 120 LKIAELKLRE 129 (131)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhc
Confidence 7877777664
No 122
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=83.67 E-value=0.97 Score=51.36 Aligned_cols=105 Identities=11% Similarity=0.011 Sum_probs=66.7
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHH------------Hh--CCCcc------h------
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAE------------KA--GKGTD------T------ 106 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~------------~~--~~~~~------~------ 106 (1267)
...|.-.+..|++.+|++.++.++..+|..+.++..-|.++..+.. .. +++ . +
T Consensus 342 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~-~~~~~~~~~~~l~~ 420 (514)
T 2gw1_A 342 IQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENKLD-GIYVGIAPLVGKAT 420 (514)
T ss_dssp HHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSS-SCSSCSHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccc-hHHHHHHHHHHHHH
Confidence 3445555666777777777777666666666666666655543211 10 011 1 0
Q ss_pred -------hhhh---hhhhhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 107 -------QLEH---LTTAASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 107 -------k~~~---l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
.-.| +..+.+|+.+.|+....-...|.+++.+|+ |++|+...++++.+ +|.+
T Consensus 421 ~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~-----~~~A~~~~~~a~~~-~~~~ 482 (514)
T 2gw1_A 421 LLTRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQQED-----IDEAITLFEESADL-ARTM 482 (514)
T ss_dssp HHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHH-CSSH
T ss_pred HHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcC-----HHHHHHHHHHHHHh-cccc
Confidence 1111 344667888999998887788888887775 79999999999998 3543
No 123
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=82.58 E-value=2.2 Score=47.30 Aligned_cols=100 Identities=12% Similarity=0.088 Sum_probs=67.0
Q ss_pred hhHHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCc----hhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhcc--
Q 037237 47 PEINNEGLRALSAFQSGDSKKALEMIKESISSHQDSP----HLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGR-- 120 (1267)
Q Consensus 47 ~~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~----~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l-- 120 (1267)
.....-...|..++..|++.+|++..+..+...|..+ .++...|.+++.+. +. +.-..+ +.+|+.+
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g----~~-~~A~~~---~~~al~~~~ 117 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLG----DY-NKAMQY---HKHDLTLAK 117 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHT----CH-HHHHHH---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCC----CH-HHHHHH---HHHHHHHHH
Confidence 4555556788899999999999999999998887754 46777777776553 32 222222 2333333
Q ss_pred ----CCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 121 ----FPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 121 ----~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
.|.........|..++.+|+ |++|+....+|+.+
T Consensus 118 ~~~~~~~~~~~~~~l~~~~~~~g~-----~~~A~~~~~~al~~ 155 (411)
T 4a1s_A 118 SMNDRLGEAKSSGNLGNTLKVMGR-----FDEAAICCERHLTL 155 (411)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHH
T ss_pred HccCchHHHHHHHHHHHHHHHCCC-----HHHHHHHHHHHHHH
Confidence 34444444455666555554 78888888888877
No 124
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=82.40 E-value=3.7 Score=42.32 Aligned_cols=94 Identities=11% Similarity=-0.043 Sum_probs=70.3
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHH
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHA 132 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A 132 (1267)
...|.-.+..|++.+|++..+.++..+|..+.++...|.+++.+. +. +-- +..+.+|+.+.|+........+
T Consensus 81 ~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g----~~-~~A---~~~~~~a~~~~~~~~~~~~~~~ 152 (275)
T 1xnf_A 81 NYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGG----RD-KLA---QDDLLAFYQDDPNDPFRSLWLY 152 (275)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhc----cH-HHH---HHHHHHHHHhCCCChHHHHHHH
Confidence 345666788999999999999999999999999999999988754 22 111 4446668899999875444333
Q ss_pred HHHHHHHhhhchhHHHHHHHHHHHhccC
Q 037237 133 ALLYKLAEINDKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 133 ~lL~~la~~~~~~Y~~a~~ec~RaL~i~ 160 (1267)
+++..+ .|++|+....+++...
T Consensus 153 -~~~~~~-----~~~~A~~~~~~~~~~~ 174 (275)
T 1xnf_A 153 -LAEQKL-----DEKQAKEVLKQHFEKS 174 (275)
T ss_dssp -HHHHHH-----CHHHHHHHHHHHHHHS
T ss_pred -HHHHhc-----CHHHHHHHHHHHHhcC
Confidence 334433 4899999999998874
No 125
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=80.77 E-value=2.9 Score=37.03 Aligned_cols=78 Identities=13% Similarity=-0.005 Sum_probs=57.0
Q ss_pred HHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHH
Q 037237 52 EGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLH 131 (1267)
Q Consensus 52 e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~ 131 (1267)
-...|.-.++.|++.+|+..+++.+..+|..+.++..-|.+++.+. +. +-- +..+.++....|+....-...
T Consensus 46 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~----~~-~~A---~~~~~~~~~~~~~~~~~~~~l 117 (125)
T 1na0_A 46 WYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQG----DY-DEA---IEYYQKALELDPNNAEAKQNL 117 (125)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhc----CH-HHH---HHHHHHHHHhCCCcHHHHHHH
Confidence 3456677788999999999999999999988888888888777643 22 111 333566888899988766666
Q ss_pred HHHHHH
Q 037237 132 AALLYK 137 (1267)
Q Consensus 132 A~lL~~ 137 (1267)
|.++..
T Consensus 118 ~~~~~~ 123 (125)
T 1na0_A 118 GNAKQK 123 (125)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 665544
No 126
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=80.68 E-value=1.9 Score=41.00 Aligned_cols=74 Identities=15% Similarity=-0.085 Sum_probs=58.6
Q ss_pred HHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHH
Q 037237 51 NEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFL 130 (1267)
Q Consensus 51 ~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f 130 (1267)
.-..+|.-.++.|++.+|+...+..+...|+.+.+|..-|.++..+..- +.. +..+++|+.+.|++...-.-
T Consensus 49 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~-~~A-------~~~~~~al~l~P~~~~a~~~ 120 (126)
T 4gco_A 49 LYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMREW-SKA-------QRAYEDALQVDPSNEEAREG 120 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH-HHH-------HHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCCCH-HHH-------HHHHHHHHHHCcCCHHHHHH
Confidence 3456788889999999999999999999999999999999999877522 111 55677899999999875443
Q ss_pred HH
Q 037237 131 HA 132 (1267)
Q Consensus 131 ~A 132 (1267)
.+
T Consensus 121 l~ 122 (126)
T 4gco_A 121 VR 122 (126)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 127
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=79.62 E-value=0.93 Score=31.37 Aligned_cols=27 Identities=19% Similarity=0.322 Sum_probs=22.8
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
..|+.|++.|.....+..|+..-|.+.
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~~H~~~ 29 (30)
T 1paa_A 3 YACGLCNRAFTRRDLLIRHAQKIHSGN 29 (30)
T ss_dssp SBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred cCCcccCcccCChHHHHHHHHHHccCC
Confidence 369999999999999999976667653
No 128
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=79.59 E-value=2.4 Score=39.03 Aligned_cols=76 Identities=9% Similarity=0.053 Sum_probs=58.7
Q ss_pred hHHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhh
Q 037237 48 EINNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVEL 127 (1267)
Q Consensus 48 ~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~ 127 (1267)
....-...|.-.++.|++.+|++..+..+..+|+.+.++..-|.+++.+..-- .. +..+++|+...|++..+
T Consensus 26 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~-~A-------~~~~~~al~~~p~~~~~ 97 (117)
T 3k9i_A 26 LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYE-QG-------VELLLKIIAETSDDETI 97 (117)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHH-HH-------HHHHHHHHHHHCCCHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHH-HH-------HHHHHHHHHhCCCcHHH
Confidence 34445667778889999999999999999999999999999998888775321 11 44466789999999876
Q ss_pred HHHH
Q 037237 128 SFLH 131 (1267)
Q Consensus 128 a~f~ 131 (1267)
..+.
T Consensus 98 ~~~~ 101 (117)
T 3k9i_A 98 QSYK 101 (117)
T ss_dssp HHTH
T ss_pred HHHH
Confidence 5443
No 129
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.50 E-value=1 Score=33.47 Aligned_cols=28 Identities=18% Similarity=0.180 Sum_probs=23.6
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-..|..|++.|.....+..|+...|.+.
T Consensus 9 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~ 36 (37)
T 2elm_A 9 LYYCSQCHYSSITKNCLKRHVIQKHSNI 36 (37)
T ss_dssp EEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHHHccCc
Confidence 3679999999999999999966677654
No 130
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=79.44 E-value=1 Score=30.68 Aligned_cols=21 Identities=24% Similarity=0.501 Sum_probs=19.6
Q ss_pred eecCccccccCChHHHHHHhH
Q 037237 330 SECFVCVEKIGNPQLCEKHFR 350 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~ 350 (1267)
+.|+.|++.|.....+..|+.
T Consensus 4 ~~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvh_A 4 FSCSLCPQRSRDFSAMTKHLR 24 (27)
T ss_dssp EECSSSSCEESSHHHHHHHHH
T ss_pred ccCCCcChhhCCHHHHHHHHH
Confidence 689999999999999999986
No 131
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=79.37 E-value=3 Score=48.71 Aligned_cols=100 Identities=12% Similarity=0.075 Sum_probs=68.4
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhC------CCC-chhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchh
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSH------QDS-PHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLV 125 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h------~~s-~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~ 125 (1267)
...+.-+.+.|++.+|++++++.+... |.. +.++..-|.++.+.. +. +.- +..++++..+.|++.
T Consensus 479 ~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g----~~-~~A---~~~~~~~~~~~p~~~ 550 (597)
T 2xpi_A 479 NELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLK----MY-DAA---IDALNQGLLLSTNDA 550 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHSSCCH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhc----CH-HHH---HHHHHHHHHhCCCCh
Confidence 344555667788888888888877652 322 445555555555432 21 111 445677888999998
Q ss_pred hhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCcc
Q 037237 126 ELSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYDTL 166 (1267)
Q Consensus 126 ~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp~ 166 (1267)
..-...|.++..+|+ |++|+...++++.+ +|.++.
T Consensus 551 ~~~~~l~~~~~~~g~-----~~~A~~~~~~~l~~-~p~~~~ 585 (597)
T 2xpi_A 551 NVHTAIALVYLHKKI-----PGLAITHLHESLAI-SPNEIM 585 (597)
T ss_dssp HHHHHHHHHHHHTTC-----HHHHHHHHHHHHHH-CTTCHH
T ss_pred HHHHHHHHHHHHhCC-----HHHHHHHHHHHHhc-CCCChH
Confidence 888888888888775 79999999999998 566543
No 132
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=79.06 E-value=4 Score=49.53 Aligned_cols=106 Identities=18% Similarity=0.234 Sum_probs=81.1
Q ss_pred HHHHHHHHhHhhcCCH-HHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhh---hhhhhhhhccCCchh
Q 037237 50 NNEGLRALSAFQSGDS-KKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEH---LTTAASAVGRFPNLV 125 (1267)
Q Consensus 50 ~~e~~~a~~~~~~Gnh-~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~---l~~~~~Av~l~p~s~ 125 (1267)
+......+...+.|.+ .+||+...+++..+|..+-+....|.+...+....+.. .....| |..+.+|....|++.
T Consensus 29 ~~~~~~~~~~~~~~~~~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~-~~~~~~~~eL~~~~~~l~~~pK~y 107 (567)
T 1dce_A 29 QSATQAVFQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPE-ESAALVKAELGFLESCLRVNPKSY 107 (567)
T ss_dssp HHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHH-HHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchh-hhhhhHHHHHHHHHHHHHhCCCCH
Confidence 4444444445556665 47799999999999999999999999999887532211 333334 777888999999999
Q ss_pred hhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 126 ELSFLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 126 ~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
..-+.++-+|..++. ..|++++.-|.++|.+
T Consensus 108 ~aW~hR~w~l~~l~~---~~~~~el~~~~k~l~~ 138 (567)
T 1dce_A 108 GTWHHRCWLLSRLPE---PNWARELELCARFLEA 138 (567)
T ss_dssp HHHHHHHHHHHTCSS---CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccc---ccHHHHHHHHHHHHhh
Confidence 988888888877663 1489999999999998
No 133
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=78.21 E-value=5.2 Score=46.69 Aligned_cols=91 Identities=8% Similarity=-0.074 Sum_probs=68.1
Q ss_pred HHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhH
Q 037237 49 INNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELS 128 (1267)
Q Consensus 49 i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a 128 (1267)
+..-..+|.-+++.|++.+|++..+..+..+|+.+.+++..|.+++.+. +. +-- +..+++|..+.|+....-
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g----~~-~~A---~~~~~~al~l~P~~~~a~ 388 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMN----EF-ESA---KGDFEKVLEVNPQNKAAR 388 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHTTC----CHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHcc----CH-HHH---HHHHHHHHHhCCCCHHHH
Confidence 4555678888999999999999999999999999999999999988764 21 111 455677999999999888
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHH
Q 037237 129 FLHAALLYKLAEINDKEWDVVIEA 152 (1267)
Q Consensus 129 ~f~A~lL~~la~~~~~~Y~~a~~e 152 (1267)
...+.++..+++ |+++.+.
T Consensus 389 ~~l~~~~~~~~~-----~~~a~~~ 407 (457)
T 1kt0_A 389 LQISMCQKKAKE-----HNERDRR 407 (457)
T ss_dssp HHHHHHHHHHHH-----HHHHHHH
T ss_pred HHHHHHHHHHHH-----HHHHHHH
Confidence 888888777775 4555544
No 134
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=77.94 E-value=3.8 Score=39.68 Aligned_cols=84 Identities=13% Similarity=-0.002 Sum_probs=64.6
Q ss_pred HHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchh-hh
Q 037237 49 INNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLV-EL 127 (1267)
Q Consensus 49 i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~-~~ 127 (1267)
+..-..+|.-.++.|++.+|+...+.++...|+.+-+|+..|.+++.+..- +-- +..+.+|+.+.|+.. .+
T Consensus 63 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g~~-----~~A---~~~~~~al~l~p~~~~~~ 134 (162)
T 3rkv_A 63 IPLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKL-----DEA---EEDLKLLLRNHPAAASVV 134 (162)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCH-----HHH---HHHHHHHHHHCGGGHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcH-----HHH---HHHHHHHHhcCCCCHHHH
Confidence 445677889999999999999999999999999999999999999887522 111 445677999999988 55
Q ss_pred HHHHHHHHHHHHh
Q 037237 128 SFLHAALLYKLAE 140 (1267)
Q Consensus 128 a~f~A~lL~~la~ 140 (1267)
....+.+.-.+.+
T Consensus 135 ~~~l~~~~~~~~~ 147 (162)
T 3rkv_A 135 AREMKIVTERRAE 147 (162)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5555555444443
No 135
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=77.75 E-value=1.1 Score=34.33 Aligned_cols=24 Identities=29% Similarity=0.483 Sum_probs=22.3
Q ss_pred ecCccccccCChHHHHHHhHhhhc
Q 037237 331 ECFVCVEKIGNPQLCEKHFRSSHW 354 (1267)
Q Consensus 331 ~C~~C~~kF~d~~~~~~H~~~eH~ 354 (1267)
-|++|-+|++|...+..|+..-|-
T Consensus 11 hcrfckkkysdvknlikhire~hd 34 (37)
T 2elu_A 11 HCRFCKKKYSDVKNLIKHIRDAHD 34 (37)
T ss_dssp EETTTTEECSSHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 599999999999999999998885
No 136
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=77.32 E-value=1.3 Score=30.14 Aligned_cols=25 Identities=32% Similarity=0.612 Sum_probs=21.5
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
..|+.|++.|.....+..|+.. |.+
T Consensus 3 ~~C~~C~~~f~~~~~l~~H~~~-h~~ 27 (29)
T 1ard_A 3 FVCEVCTRAFARQEHLKRHYRS-HTN 27 (29)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHH-HSC
T ss_pred eECCCCCcccCCHHHHHHHHHH-hcC
Confidence 5799999999999999999874 543
No 137
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=76.03 E-value=3.5 Score=40.03 Aligned_cols=68 Identities=13% Similarity=-0.014 Sum_probs=54.9
Q ss_pred HHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhh
Q 037237 51 NEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVE 126 (1267)
Q Consensus 51 ~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~ 126 (1267)
.-...|.-+++.|++.+|++.++..+..+|+.+.++..-|.+++.+..- +-- +..+++|+.+.|+...
T Consensus 47 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~-----~~A---~~~~~~al~~~p~~~~ 114 (164)
T 3sz7_A 47 YLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFDMADY-----KGA---KEAYEKGIEAEGNGGS 114 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH-----HHH---HHHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCH-----HHH---HHHHHHHHHhCCCchH
Confidence 4456778889999999999999999999999999999999998876422 111 4456779999999876
No 138
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=75.43 E-value=2.3 Score=46.23 Aligned_cols=42 Identities=17% Similarity=0.132 Sum_probs=32.3
Q ss_pred hhhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 113 TAASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 113 ~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
.+.+|+.++|++..+-.-+|..+..+|+ |++|..-.+||+..
T Consensus 191 ~~~~al~~~p~~~~~~~~~~~~~~~~g~-----~~~A~~~~~~al~~ 232 (308)
T 2ond_A 191 IFELGLKKYGDIPEYVLAYIDYLSHLNE-----DNNTRVLFERVLTS 232 (308)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCC-----HHHHHHHHHHHHHS
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHCCC-----HHHHHHHHHHHHhc
Confidence 4566888888888777777777666554 78888889999886
No 139
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=75.41 E-value=1.2 Score=30.16 Aligned_cols=25 Identities=20% Similarity=0.376 Sum_probs=21.3
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|+.|++.|.....+..|+.. |.+
T Consensus 3 ~~C~~C~~~f~~~~~l~~H~~~-h~~ 27 (29)
T 2m0e_A 3 HKCPHCDKKFNQVGNLKAHLKI-HIA 27 (29)
T ss_dssp CCCSSCCCCCCTTTHHHHHHHH-HHS
T ss_pred CcCCCCCcccCCHHHHHHHHHH-hcc
Confidence 5799999999999999999864 543
No 140
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=75.18 E-value=1.4 Score=35.99 Aligned_cols=29 Identities=21% Similarity=0.297 Sum_probs=25.7
Q ss_pred eeecCccccccCChHHHHHHhHhhhcccC
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNHL 357 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~l 357 (1267)
-+.|+.|++.|.....+..|+...|.+.+
T Consensus 30 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~ 58 (60)
T 2adr_A 30 PYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58 (60)
T ss_dssp SEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred CccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence 46899999999999999999988888765
No 141
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=74.99 E-value=5.3 Score=36.75 Aligned_cols=78 Identities=15% Similarity=-0.008 Sum_probs=57.0
Q ss_pred CCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhc
Q 037237 79 HQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLK 158 (1267)
Q Consensus 79 h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~ 158 (1267)
+|..+-++..-|.+++-.+..... +--..+ +++|..+.|+++.-..+.|...|..|+ |++|+..=++.|.
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~--~~A~~~---l~~AL~~dp~~~rA~~~lg~~~~~~g~-----y~~Ai~~w~~~l~ 71 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMT--DEVSLL---LEQALQLEPYNEAALSLIANDHFISFR-----FQEAIDTWVLLLD 71 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCC--HHHHHH---HHHHHHHCTTCHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCC--HHHHHH---HHHHHHHCcCCHHHHHHHHHHHHHcCC-----HHHHHHHHHHHHh
Confidence 466777777888887655433222 222233 566999999999999999999999775 8999999999988
Q ss_pred cCCCCCccc
Q 037237 159 IGDPYDTLL 167 (1267)
Q Consensus 159 i~~P~dp~~ 167 (1267)
...+ +|..
T Consensus 72 ~~p~-~~~~ 79 (93)
T 3bee_A 72 SNDP-NLDR 79 (93)
T ss_dssp CCCT-TCCH
T ss_pred hCCC-CccH
Confidence 8544 6555
No 142
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=74.94 E-value=7.1 Score=39.10 Aligned_cols=84 Identities=12% Similarity=-0.006 Sum_probs=67.0
Q ss_pred HHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHH
Q 037237 50 NNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSF 129 (1267)
Q Consensus 50 ~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~ 129 (1267)
..-...|.-++..|++.+|+...+..+..+|..+.++..-|.+++.+.. . +-- +..+++|+.+.|+...+-.
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~----~-~~A---~~~~~~al~~~p~~~~~~~ 160 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGF----L-EEA---KENLYKAASLNPNNLDIRN 160 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTC----H-HHH---HHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccc----H-HHH---HHHHHHHHHHCCCcHHHHH
Confidence 4455678888999999999999999999999999999999998877652 2 111 4446779999999998888
Q ss_pred HHHHHHHHHHhh
Q 037237 130 LHAALLYKLAEI 141 (1267)
Q Consensus 130 f~A~lL~~la~~ 141 (1267)
..+.++..+++.
T Consensus 161 ~l~~~~~~~~~~ 172 (198)
T 2fbn_A 161 SYELCVNKLKEA 172 (198)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888887777653
No 143
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=74.89 E-value=1.6 Score=48.82 Aligned_cols=100 Identities=11% Similarity=-0.025 Sum_probs=45.8
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHH
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHA 132 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A 132 (1267)
...|.-+++.|++.+|++..+..+..+|+.+.+++.-|.+++.+. +. +-- +..+++|+.+.|++.......+
T Consensus 234 ~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g----~~-~~A---~~~l~~al~l~p~~~~a~~~L~ 305 (338)
T 2if4_A 234 LNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELG----QM-DSA---RDDFRKAQKYAPDDKAIRRELR 305 (338)
T ss_dssp HHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTT----CH-HHH---HHHHHHTTC-------------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC----CH-HHH---HHHHHHHHHHCCCCHHHHHHHH
Confidence 456777788999999999999999999999888888888877654 21 111 4456779999999877666655
Q ss_pred HHHHHHHhhhchhHHHHHHHHHHHhccCCCCCc
Q 037237 133 ALLYKLAEINDKEWDVVIEACERMLKIGDPYDT 165 (1267)
Q Consensus 133 ~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp 165 (1267)
.+..... ..++++.+..+++|.. .|.+|
T Consensus 306 ~l~~~~~----~~~~~a~~~~~~~l~~-~p~~~ 333 (338)
T 2if4_A 306 ALAEQEK----ALYQKQKEMYKGIFKG-KDEGG 333 (338)
T ss_dssp ---------------------------------
T ss_pred HHHHHHH----HHHHHHHHHHHHhhCC-CCCCC
Confidence 5533332 3567777777777776 45544
No 144
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=74.43 E-value=5.7 Score=36.16 Aligned_cols=77 Identities=10% Similarity=-0.002 Sum_probs=56.0
Q ss_pred HHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCC---chhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhh
Q 037237 50 NNEGLRALSAFQSGDSKKALEMIKESISSHQDS---PHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVE 126 (1267)
Q Consensus 50 ~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s---~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~ 126 (1267)
..-...|.-.++.|++.+|+...+.++..+|++ +.++..-|.+++.+. +. +-- +..+.+++..+|++..
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g----~~-~~A---~~~~~~~~~~~p~~~~ 111 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEG----KN-TEA---QQTLQQVATQYPGSDA 111 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHSTTSHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcC----CH-HHH---HHHHHHHHHHCCCChH
Confidence 344567778899999999999999999999988 666888888877654 32 222 3335668899999876
Q ss_pred hHHHHHHH
Q 037237 127 LSFLHAAL 134 (1267)
Q Consensus 127 ~a~f~A~l 134 (1267)
.....+++
T Consensus 112 ~~~a~~~l 119 (129)
T 2xev_A 112 ARVAQERL 119 (129)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55444443
No 145
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=74.41 E-value=4.8 Score=39.16 Aligned_cols=74 Identities=14% Similarity=-0.036 Sum_probs=57.4
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHH
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHA 132 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A 132 (1267)
...|.-+++.|++.+|++..+..+...|+.+.+++.-|.++..+...- .. +..+++|+.+.|+...+.....
T Consensus 59 ~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~-~A-------~~~~~~al~~~p~~~~~~~~~~ 130 (148)
T 2vgx_A 59 LGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGELA-EA-------ESGLFLAQELIANXPEFXELST 130 (148)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHH-HH-------HHHHHHHHHHHTTCGGGHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHcCCHH-HH-------HHHHHHHHHHCcCCCcchHHHH
Confidence 356677789999999999999999999999999999999988765321 11 4456779999999887755544
Q ss_pred HH
Q 037237 133 AL 134 (1267)
Q Consensus 133 ~l 134 (1267)
+.
T Consensus 131 ~~ 132 (148)
T 2vgx_A 131 RV 132 (148)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 146
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=74.27 E-value=4.6 Score=38.44 Aligned_cols=79 Identities=16% Similarity=-0.049 Sum_probs=60.0
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHH
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHA 132 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A 132 (1267)
...|.-..+.|++.+|+...+..+...|+.+.++..-|.++..+... +-- +..+++|+.+.|++.......+
T Consensus 56 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~-----~~A---~~~~~~al~~~p~~~~~~~~~~ 127 (142)
T 2xcb_A 56 LGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDL-----DGA---ESGFYSARALAAAQPAHEALAA 127 (142)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCH-----HHH---HHHHHHHHHHHHTCGGGHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCH-----HHH---HHHHHHHHHhCCCCcchHHHHH
Confidence 34566778899999999999999999999999999999988876522 111 4446678999998887766665
Q ss_pred HHHHHHH
Q 037237 133 ALLYKLA 139 (1267)
Q Consensus 133 ~lL~~la 139 (1267)
+..-.++
T Consensus 128 ~~~~~l~ 134 (142)
T 2xcb_A 128 RAGAMLE 134 (142)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5544443
No 147
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=74.24 E-value=6.9 Score=44.58 Aligned_cols=80 Identities=14% Similarity=0.018 Sum_probs=64.0
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHH
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHA 132 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A 132 (1267)
...|.-+++.|++.+|++..+.++..+|..+.+++..|.+++.+..- +-- +..+++|..+.|+...+....+
T Consensus 277 ~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~-----~eA---~~~l~~Al~l~P~~~~~~~~l~ 348 (370)
T 1ihg_A 277 LNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEY-----DQA---LADLKKAQEIAPEDKAIQAELL 348 (370)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCH-----HHH---HHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCH-----HHH---HHHHHHHHHhCCCCHHHHHHHH
Confidence 35666778899999999999999999999999999999888876421 111 5556779999999998888888
Q ss_pred HHHHHHHh
Q 037237 133 ALLYKLAE 140 (1267)
Q Consensus 133 ~lL~~la~ 140 (1267)
.++..+++
T Consensus 349 ~~~~~~~~ 356 (370)
T 1ihg_A 349 KVKQKIKA 356 (370)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88777665
No 148
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=74.23 E-value=5.4 Score=34.93 Aligned_cols=75 Identities=16% Similarity=-0.038 Sum_probs=55.4
Q ss_pred HHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHH
Q 037237 51 NEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFL 130 (1267)
Q Consensus 51 ~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f 130 (1267)
.-...|.-.+..|++.+|+..++..+..+|..+.++..-|.++..+. +. +.- +..+.+|..+.|++......
T Consensus 40 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~----~~-~~A---~~~~~~~~~~~~~~~~~~~~ 111 (118)
T 1elw_A 40 LYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLN----RF-EEA---KRTYEEGLKHEANNPQLKEG 111 (118)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHTTCTTCHHHHHH
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHh----hH-HHH---HHHHHHHHHcCCCCHHHHHH
Confidence 34556777888999999999999999999998888888888877653 22 111 33456688999988765544
Q ss_pred HHH
Q 037237 131 HAA 133 (1267)
Q Consensus 131 ~A~ 133 (1267)
.+.
T Consensus 112 l~~ 114 (118)
T 1elw_A 112 LQN 114 (118)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 149
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=74.20 E-value=1.6 Score=29.34 Aligned_cols=22 Identities=18% Similarity=0.350 Sum_probs=19.6
Q ss_pred eecCccccccCChHHHHHHhHh
Q 037237 330 SECFVCVEKIGNPQLCEKHFRS 351 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~ 351 (1267)
..|+.|++.|.....+..|+..
T Consensus 2 ~~C~~C~k~f~~~~~l~~H~~~ 23 (27)
T 1znf_A 2 YKCGLCERSFVEKSALSRHQRV 23 (27)
T ss_dssp CBCSSSCCBCSSHHHHHHHGGG
T ss_pred ccCCCCCCcCCCHHHHHHHHHH
Confidence 3699999999999999999863
No 150
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=73.96 E-value=1.8 Score=29.43 Aligned_cols=24 Identities=21% Similarity=0.407 Sum_probs=21.0
Q ss_pred eecCccccccCChHHHHHHhHhhhc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHW 354 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~ 354 (1267)
+.|+.|++.|.....+..|+.. |.
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~-H~ 26 (29)
T 2m0f_A 3 LKCRECGKQFTTSGNLKRHLRI-HS 26 (29)
T ss_dssp EECTTTSCEESCHHHHHHHHHH-HH
T ss_pred ccCCCCCCccCChhHHHHHHHH-hc
Confidence 5799999999999999999864 54
No 151
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.66 E-value=5.6 Score=36.75 Aligned_cols=78 Identities=13% Similarity=-0.001 Sum_probs=58.8
Q ss_pred HHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhH
Q 037237 49 INNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELS 128 (1267)
Q Consensus 49 i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a 128 (1267)
...-...|.-++..|++.+|++..+..+..+|..+.++...|.+++.+. +. +-- +..+.+|+.+.|+...+.
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~----~~-~~A---~~~~~~al~~~p~~~~~~ 136 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKLG----RL-DQA---VLDLQRCVSLEPKNKVFQ 136 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHT----CH-HHH---HHHHHHHHHHCSSCHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHHcC----CH-HHH---HHHHHHHHHcCCCcHHHH
Confidence 4455567778889999999999999999999988999999998887764 21 111 344566889999987765
Q ss_pred HHHHHH
Q 037237 129 FLHAAL 134 (1267)
Q Consensus 129 ~f~A~l 134 (1267)
...+.+
T Consensus 137 ~~l~~~ 142 (148)
T 2dba_A 137 EALRNI 142 (148)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554443
No 152
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=73.47 E-value=4.5 Score=37.19 Aligned_cols=77 Identities=14% Similarity=0.010 Sum_probs=57.6
Q ss_pred HHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccC------Cc
Q 037237 50 NNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRF------PN 123 (1267)
Q Consensus 50 ~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~------p~ 123 (1267)
..-..+|.-.++.|++.+|++..+..+..+|+.+.++..-|.++..+..- +-- +..+++|+.+. |+
T Consensus 39 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~-----~~A---~~~~~~al~~~p~~~~~p~ 110 (126)
T 3upv_A 39 RGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEY-----ASA---LETLDAARTKDAEVNNGSS 110 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH-----HHH---HHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhCH-----HHH---HHHHHHHHHhCcccCCchh
Confidence 34456788888999999999999999999999999999999988876421 111 44466688888 77
Q ss_pred hhhhHHHHHHH
Q 037237 124 LVELSFLHAAL 134 (1267)
Q Consensus 124 s~~~a~f~A~l 134 (1267)
...+....+..
T Consensus 111 ~~~~~~~l~~~ 121 (126)
T 3upv_A 111 AREIDQLYYKA 121 (126)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66655544443
No 153
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=73.47 E-value=7.3 Score=40.65 Aligned_cols=95 Identities=17% Similarity=0.148 Sum_probs=60.9
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCC----chhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhcc------CC
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDS----PHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGR------FP 122 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s----~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l------~p 122 (1267)
...|...+..|++.+|+...+..+...|.. +.++...|.+++... +. +.-..++ .+|..+ .|
T Consensus 9 ~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g----~~-~~A~~~~---~~al~~~~~~~~~~ 80 (338)
T 3ro2_A 9 ALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLH----DY-AKALEYH---HHDLTLARTIGDQL 80 (338)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTT----CH-HHHHHHH---HHHHHHHHHHTCHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcC----CH-HHHHHHH---HHHHHHhhcccccH
Confidence 456888899999999999999999888776 355666666666543 32 2222232 223333 22
Q ss_pred chhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccC
Q 037237 123 NLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 123 ~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~ 160 (1267)
.....-...|..++.+| .|++|+....+|+.+.
T Consensus 81 ~~~~~~~~l~~~~~~~g-----~~~~A~~~~~~al~~~ 113 (338)
T 3ro2_A 81 GEAKASGNLGNTLKVLG-----NFDEAIVCCQRHLDIS 113 (338)
T ss_dssp HHHHHHHHHHHHHHHTT-----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcc-----CHHHHHHHHHHHHHHH
Confidence 22333334455555544 4899999999998873
No 154
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=73.09 E-value=1.9 Score=29.42 Aligned_cols=24 Identities=21% Similarity=0.447 Sum_probs=20.9
Q ss_pred eecCccccccCChHHHHHHhHhhhc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHW 354 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~ 354 (1267)
..|..|++.|.....+..|+.. |.
T Consensus 4 ~~C~~C~~~f~~~~~l~~H~~~-h~ 27 (30)
T 2m0d_A 4 YQCDYCGRSFSDPTSKMRHLET-HD 27 (30)
T ss_dssp EECTTTCCEESCHHHHHHHHHT-TC
T ss_pred ccCCCCCcccCCHHHHHHHHHH-hc
Confidence 5799999999999999999873 54
No 155
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=72.79 E-value=2 Score=29.29 Aligned_cols=25 Identities=20% Similarity=0.246 Sum_probs=21.2
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
..|+.|++.|.....+..|+.. |.+
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~-H~~ 27 (29)
T 1rik_A 3 FACPECPKRFMRSDHLTLHILL-HEN 27 (29)
T ss_dssp EECSSSSCEESCSHHHHHHHTG-GGS
T ss_pred ccCCCCCchhCCHHHHHHHHHH-hcC
Confidence 4799999999999999999874 543
No 156
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=72.59 E-value=2.4 Score=30.56 Aligned_cols=27 Identities=19% Similarity=0.506 Sum_probs=22.5
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|..|++.|.....+..|+. -|.+.
T Consensus 7 ~~~C~~C~k~f~~~~~l~~H~~-~H~~~ 33 (35)
T 1srk_A 7 PFVCRICLSAFTTKANCARHLK-VHTDT 33 (35)
T ss_dssp CEECSSSCCEESSHHHHHHHHG-GGTSC
T ss_pred CeeCCCCCcccCCHHHHHHHHH-HcCCC
Confidence 3689999999999999999986 46543
No 157
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=72.16 E-value=2.9 Score=37.76 Aligned_cols=68 Identities=16% Similarity=0.164 Sum_probs=52.3
Q ss_pred CCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhc
Q 037237 79 HQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLK 158 (1267)
Q Consensus 79 h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~ 158 (1267)
.|+.+.+++.-|.+++.+. +. +.- +..+.+|+.+.|+....-...|.+++.+++ |++|+...++|+.
T Consensus 3 ~p~~~~~~~~lg~~~~~~g----~~-~~A---~~~~~~al~~~p~~~~a~~~lg~~~~~~g~-----~~~A~~~~~~al~ 69 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHD----NA-SRA---LALFEELVETDPDYVGTYYHLGKLYERLDR-----TDDAIDTYAQGIE 69 (100)
T ss_dssp --CCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHSTTCTHHHHHHHHHHHHTTC-----HHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcC----CH-HHH---HHHHHHHHHhCCCcHHHHHHHHHHHHHcCC-----HHHHHHHHHHHHh
Confidence 5778888888898887754 22 111 445677999999999988888988888775 7999999999998
Q ss_pred c
Q 037237 159 I 159 (1267)
Q Consensus 159 i 159 (1267)
+
T Consensus 70 l 70 (100)
T 3ma5_A 70 V 70 (100)
T ss_dssp H
T ss_pred h
Confidence 8
No 158
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=72.12 E-value=1.7 Score=29.71 Aligned_cols=21 Identities=19% Similarity=0.362 Sum_probs=19.3
Q ss_pred eecCccccccCChHHHHHHhH
Q 037237 330 SECFVCVEKIGNPQLCEKHFR 350 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~ 350 (1267)
..|+.|++.|.....+..|+.
T Consensus 4 ~~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvg_A 4 YRCPLCRAGCPSLASMQAHMR 24 (27)
T ss_dssp EEETTTTEEESCHHHHHHHHT
T ss_pred cCCCCCCcccCCHHHHHHHHH
Confidence 479999999999999999985
No 159
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=71.85 E-value=11 Score=44.09 Aligned_cols=96 Identities=10% Similarity=-0.014 Sum_probs=53.7
Q ss_pred HHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHHHH
Q 037237 56 ALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAALL 135 (1267)
Q Consensus 56 a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~lL 135 (1267)
+.-+.+.|++.+|+++.++.+..+|..+.++..-|.++.+.. +. +-- +..++++....|++.......+..+
T Consensus 380 ~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g----~~-~~A---~~~~~~~~~~~~~~~~~~~~l~~~~ 451 (597)
T 2xpi_A 380 GIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEG----EH-DQA---ISAYTTAARLFQGTHLPYLFLGMQH 451 (597)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT----CH-HHH---HHHHHHHHHTTTTCSHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC----CH-HHH---HHHHHHHHHhCccchHHHHHHHHHH
Confidence 334445555555555555555555554444444444444332 11 000 3345567777787776666666666
Q ss_pred HHHHhhhchhHHHHHHHHHHHhccCCCCCc
Q 037237 136 YKLAEINDKEWDVVIEACERMLKIGDPYDT 165 (1267)
Q Consensus 136 ~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp 165 (1267)
...|+ |++|+...++++.+ .|.+|
T Consensus 452 ~~~g~-----~~~A~~~~~~~~~~-~~~~~ 475 (597)
T 2xpi_A 452 MQLGN-----ILLANEYLQSSYAL-FQYDP 475 (597)
T ss_dssp HHHTC-----HHHHHHHHHHHHHH-CCCCH
T ss_pred HHcCC-----HHHHHHHHHHHHHh-CCCCh
Confidence 66554 68888888887776 35443
No 160
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=71.75 E-value=2 Score=29.24 Aligned_cols=21 Identities=29% Similarity=0.611 Sum_probs=19.4
Q ss_pred eecCccccccCChHHHHHHhH
Q 037237 330 SECFVCVEKIGNPQLCEKHFR 350 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~ 350 (1267)
..|+.|++.|.....+..|+.
T Consensus 4 ~~C~~C~k~f~~~~~l~~H~~ 24 (28)
T 2kvf_A 4 YSCSVCGKRFSLKHQMETHYR 24 (28)
T ss_dssp EECSSSCCEESCHHHHHHHHT
T ss_pred ccCCCCCcccCCHHHHHHHHH
Confidence 579999999999999999986
No 161
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=71.55 E-value=2.1 Score=29.15 Aligned_cols=23 Identities=13% Similarity=0.372 Sum_probs=20.5
Q ss_pred eecCccccccCChHHHHHHhHhh
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSS 352 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~e 352 (1267)
+.|+.|++.|.....+..|+..-
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~h 25 (30)
T 1klr_A 3 YQCQYCEFRSADSSNLKTHIKTK 25 (30)
T ss_dssp CCCSSSSCCCSCSHHHHHHHHHH
T ss_pred ccCCCCCCccCCHHHHHHHHHHH
Confidence 57999999999999999998743
No 162
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=71.00 E-value=2.4 Score=31.02 Aligned_cols=25 Identities=16% Similarity=0.236 Sum_probs=21.4
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|+.|++.|.....+..|+. -|.+
T Consensus 12 ~~C~~C~k~f~~~~~l~~H~~-~H~~ 36 (37)
T 1p7a_A 12 FQCPDCDRSFSRSDHLALHRK-RHML 36 (37)
T ss_dssp BCCTTTCCCBSSHHHHHHHHG-GGTC
T ss_pred ccCCCCCcccCcHHHHHHHHH-Hhcc
Confidence 689999999999999999986 3543
No 163
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.17 E-value=2.2 Score=30.90 Aligned_cols=25 Identities=20% Similarity=0.196 Sum_probs=21.5
Q ss_pred eeecCccccccCChHHHHHHhHhhhc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHW 354 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~ 354 (1267)
-+.|+.|++.|.....+..|+. -|.
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~-~H~ 33 (36)
T 2elr_A 9 THLCDMCGKKFKSKGTLKSHKL-LHT 33 (36)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHH-HHS
T ss_pred CeecCcCCCCcCchHHHHHHHH-Hhc
Confidence 4689999999999999999986 354
No 164
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=72.91 E-value=0.91 Score=30.62 Aligned_cols=22 Identities=18% Similarity=0.336 Sum_probs=19.6
Q ss_pred eecCccccccCChHHHHHHhHh
Q 037237 330 SECFVCVEKIGNPQLCEKHFRS 351 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~ 351 (1267)
..|+.|++.|.....+..|+..
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~ 24 (26)
T 2lvu_A 3 YVCERCGKRFVQSSQLANHIRH 24 (26)
Confidence 4799999999999999999863
No 165
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.76 E-value=3.2 Score=35.82 Aligned_cols=29 Identities=24% Similarity=0.323 Sum_probs=26.1
Q ss_pred eeecCccccccCChHHHHHHhHhhhcccC
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNHL 357 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~l 357 (1267)
-+.|+.|++.|.....|..|+...|.+..
T Consensus 38 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~ 66 (78)
T 2d9h_A 38 RFPCEFCGKRFEKPDSVAAHRSKSHPALL 66 (78)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHTSTTTS
T ss_pred ccCCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence 36899999999999999999999998765
No 166
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=69.75 E-value=6.3 Score=40.25 Aligned_cols=100 Identities=15% Similarity=0.051 Sum_probs=65.2
Q ss_pred hhHHHHHHHHHhHhhcCCHHHHHHHHHHHHhh--------CCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhh
Q 037237 47 PEINNEGLRALSAFQSGDSKKALEMIKESISS--------HQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAV 118 (1267)
Q Consensus 47 ~~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~--------h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av 118 (1267)
.....-...|.-.+..|++.+|++..+..+.. +|..+.++...|.+++.+. +. +-- +..+.+|.
T Consensus 83 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g----~~-~~A---~~~~~~al 154 (283)
T 3edt_B 83 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQG----KA-EEV---EYYYRRAL 154 (283)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTT----CH-HHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcC----CH-HHH---HHHHHHHH
Confidence 44555666777888999999999999999866 2444555555565555442 22 111 22234455
Q ss_pred cc--------CCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 119 GR--------FPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 119 ~l--------~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
.+ .|.....-...|.+++.+++ |++|+.-.++++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~-----~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 155 EIYATRLGPDDPNVAKTKNNLASCYLKQGK-----YQDAETLYKEILTR 198 (283)
T ss_dssp HHHHHHSCTTCHHHHHHHHHHHHHHHHHTC-----HHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHcCC-----HHHHHHHHHHHHHH
Confidence 55 55555556667777777665 78888888888876
No 167
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.57 E-value=2.4 Score=30.88 Aligned_cols=25 Identities=20% Similarity=0.294 Sum_probs=21.6
Q ss_pred eeecCccccccCChHHHHHHhHhhhc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHW 354 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~ 354 (1267)
-+.|+.|++.|.....+..|+.. |.
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~-H~ 33 (36)
T 2els_A 9 IFTCEYCNKVFKFKHSLQAHLRI-HT 33 (36)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH-HC
T ss_pred CEECCCCCceeCCHHHHHHHHHH-hC
Confidence 46899999999999999999873 54
No 168
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=69.46 E-value=2.6 Score=30.21 Aligned_cols=26 Identities=19% Similarity=0.298 Sum_probs=22.1
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|+.|++.|.....+..|+.. |.+
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~-h~~ 32 (35)
T 2elx_A 7 GYVCALCLKKFVSSIRLRSHIRE-VHG 32 (35)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-TSC
T ss_pred CeECCCCcchhCCHHHHHHHHHH-HcC
Confidence 46899999999999999999874 443
No 169
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=69.36 E-value=12 Score=41.85 Aligned_cols=103 Identities=12% Similarity=0.031 Sum_probs=79.2
Q ss_pred HHHHHHHHhHhhcCCH-HHHHHHHHHHHhhCCCCchhhhhhhHHHHHHH-HHhCCCcchhhhhhhhhhhhhccCCchhhh
Q 037237 50 NNEGLRALSAFQSGDS-KKALEMIKESISSHQDSPHLHCLEAFIHHSLA-EKAGKGTDTQLEHLTTAASAVGRFPNLVEL 127 (1267)
Q Consensus 50 ~~e~~~a~~~~~~Gnh-~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA-~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~ 127 (1267)
+.-....+...+.|.+ .+||++...++..+|...-+....|.+...+. ...++. |.....+....|++..+
T Consensus 33 ~~~~~~~~a~~~~~e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~ee-------L~~~~~~L~~nPk~y~a 105 (306)
T 3dra_A 33 KQIMGLLLALMKAEEYSERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDE-------LDWCEEIALDNEKNYQI 105 (306)
T ss_dssp HHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHH-------HHHHHHHHHHCTTCCHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHH-------HHHHHHHHHHCcccHHH
Confidence 3344444555566776 59999999999999999999999999988766 222222 66677799999999999
Q ss_pred HHHHHHHHHHHHhhhc--hhHHHHHHHHHHHhcc
Q 037237 128 SFLHAALLYKLAEIND--KEWDVVIEACERMLKI 159 (1267)
Q Consensus 128 a~f~A~lL~~la~~~~--~~Y~~a~~ec~RaL~i 159 (1267)
-+.+..+|-.+...++ ..|++++.-|.++|.+
T Consensus 106 W~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~ 139 (306)
T 3dra_A 106 WNYRQLIIGQIMELNNNDFDPYREFDILEAMLSS 139 (306)
T ss_dssp HHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHh
Confidence 9999999844443332 3689999999999987
No 170
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=68.19 E-value=11 Score=42.60 Aligned_cols=87 Identities=13% Similarity=0.015 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHhhCCC--CchhhhhhhHHHHHHHHH-hCCCcchhhhhhhhhhhhhccCCch-hhhHHHHHHHHHHHHh
Q 037237 65 SKKALEMIKESISSHQD--SPHLHCLEAFIHHSLAEK-AGKGTDTQLEHLTTAASAVGRFPNL-VELSFLHAALLYKLAE 140 (1267)
Q Consensus 65 h~kAL~~~kd~~~~h~~--s~~~h~~qg~v~~~lA~~-~~~~~~~k~~~l~~~~~Av~l~p~s-~~~a~f~A~lL~~la~ 140 (1267)
-.+|..+|+..++--|+ .+-+|..=|.+++++-.. ..|+ +--..| ++||+.+.|+. +..-.|||..|+....
T Consensus 179 l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~-ekA~~~---ferAL~LnP~~~id~~v~YA~~l~~~~g 254 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGM-EKAHTA---FEHLTRYCSAHDPDHHITYADALCIPLN 254 (301)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCH-HHHHHH---HHHHHHHCCTTCSHHHHHHHHHTTTTTT
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCH-HHHHHH---HHHHHHhCCCCCchHHHHHHHHHHHhcC
Confidence 46778888888888887 688999999998876321 1243 333345 46699999986 9999999999877532
Q ss_pred hhchhHHHHHHHHHHHhcc
Q 037237 141 INDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 141 ~~~~~Y~~a~~ec~RaL~i 159 (1267)
.|+++.+..++||.+
T Consensus 255 ----d~~~a~~~L~kAL~a 269 (301)
T 3u64_A 255 ----NRAGFDEALDRALAI 269 (301)
T ss_dssp ----CHHHHHHHHHHHHHC
T ss_pred ----CHHHHHHHHHHHHcC
Confidence 389999999999998
No 171
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=67.71 E-value=3 Score=36.01 Aligned_cols=26 Identities=19% Similarity=0.510 Sum_probs=13.2
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|+.|++.|.....+..|+...|.+
T Consensus 16 ~~C~~C~k~f~~~~~L~~H~~~~h~~ 41 (77)
T 2ct1_A 16 YECYICHARFTQSGTMKMHILQKHTE 41 (77)
T ss_dssp EECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred eECCCcCchhCCHHHHHHHHHHhcCC
Confidence 34555555555555555555444443
No 172
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=67.22 E-value=5.1 Score=37.86 Aligned_cols=65 Identities=11% Similarity=0.096 Sum_probs=50.8
Q ss_pred CchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 82 SPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 82 s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
.+.+|.--|.++++... .+.. +..+.+|+++.|+...+-.-.|..++.+++ |++|+.-+.+||.+
T Consensus 7 ~A~a~~~lG~~~~~~~~-~~~A-------~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~-----~~~A~~~~~~al~~ 71 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKD-FEKA-------HVHYDKAIELDPSNITFYNNKAAVYFEEKK-----FAECVQFCEKAVEV 71 (127)
T ss_dssp HHHHHHHHHHHHHHTTC-HHHH-------HHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC-HHHH-------HHHHHHHHHhCCCCHHHHHhHHHHHHHhhh-----HHHHHHHHHHHHHh
Confidence 45667777888776531 1111 566788999999999888888999998886 89999999999998
No 173
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=66.95 E-value=2.8 Score=30.36 Aligned_cols=26 Identities=19% Similarity=0.222 Sum_probs=22.1
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
..|+.|++.|.....+..|+. -|.+.
T Consensus 3 ~~C~~C~k~F~~~~~L~~H~~-~H~~~ 28 (33)
T 1rim_A 3 FACPECPKRFMRSDHLSKHIT-LHELL 28 (33)
T ss_dssp CCCSSSCCCCSSHHHHHHHHH-HHTTT
T ss_pred ccCCCCCchhCCHHHHHHHHH-HhCCC
Confidence 479999999999999999986 46553
No 174
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.85 E-value=3 Score=30.16 Aligned_cols=26 Identities=19% Similarity=0.189 Sum_probs=21.9
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-..|+.|++.|.....+..|+. -|.+
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~-~H~~ 34 (36)
T 2elt_A 9 PYKCPQCSYASAIKANLNVHLR-KHTG 34 (36)
T ss_dssp SEECSSSSCEESSHHHHHHHHH-HHTC
T ss_pred CCCCCCCCcccCCHHHHHHHHH-HccC
Confidence 3689999999999999999986 3543
No 175
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=66.80 E-value=2.9 Score=33.24 Aligned_cols=30 Identities=23% Similarity=0.308 Sum_probs=23.6
Q ss_pred eecCccccccCChHHHHHHhHhhhcccCcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNHLEI 359 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~l~p 359 (1267)
..|..|++.|.....|..|+..-|.+.-.+
T Consensus 8 ~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~ 37 (48)
T 3iuf_A 8 YACDICGKRYKNRPGLSYHYAHSHLAEEEG 37 (48)
T ss_dssp EECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred EECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence 479999999999999999998678775543
No 176
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=66.68 E-value=2.9 Score=33.65 Aligned_cols=24 Identities=17% Similarity=0.307 Sum_probs=21.5
Q ss_pred eecCccccccCChHHHHHHhHhhh
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSH 353 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH 353 (1267)
+.|+.|++.|.....+..|+..-|
T Consensus 33 ~~C~~C~~~f~~~~~l~~H~~~hh 56 (57)
T 3uk3_C 33 YKCEFCEYAAAQKTSLRYHLERHH 56 (57)
T ss_dssp EECSSSSCEESSHHHHHHHHHHHC
T ss_pred cCCCCCcchhCCHHHHHHHHHHhc
Confidence 789999999999999999998655
No 177
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=66.19 E-value=3 Score=34.69 Aligned_cols=25 Identities=16% Similarity=0.359 Sum_probs=22.3
Q ss_pred eeecCccccccCChHHHHHHhHhhh
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSH 353 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH 353 (1267)
-+.|+.|++.|.....+..|+..-|
T Consensus 40 ~~~C~~C~k~f~~~~~L~~H~~~~H 64 (66)
T 2drp_A 40 VYPCPFCFKEFTRKDNMTAHVKIIH 64 (66)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHT
T ss_pred CeECCCCCCccCCHHHHHHHHHHHc
Confidence 4689999999999999999998766
No 178
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=65.98 E-value=5.4 Score=43.13 Aligned_cols=47 Identities=15% Similarity=0.122 Sum_probs=41.1
Q ss_pred HHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHH
Q 037237 51 NEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLA 97 (1267)
Q Consensus 51 ~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA 97 (1267)
.-..+|.-+++.|++.+|++.++..+..+|+.+.++..-|.++..+.
T Consensus 40 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g 86 (281)
T 2c2l_A 40 YYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEME 86 (281)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 34577888899999999999999999999999999999999887654
No 179
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.58 E-value=3.4 Score=31.87 Aligned_cols=27 Identities=22% Similarity=0.284 Sum_probs=23.1
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+.. |.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~ 38 (46)
T 2emy_A 12 PYECHECGKAFSRKYQLISHQRT-HAGE 38 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HTTS
T ss_pred CcCCCCCCcccCcHHHHHHHHHH-cCCC
Confidence 46899999999999999999875 6653
No 180
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=65.32 E-value=4 Score=36.84 Aligned_cols=65 Identities=12% Similarity=0.083 Sum_probs=49.2
Q ss_pred HHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCch
Q 037237 52 EGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNL 124 (1267)
Q Consensus 52 e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s 124 (1267)
-...|..+++.|++.+|++.++.++...|+.+.++..-|.++..+..-- .. +..+++|+.+.|+.
T Consensus 10 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~-~A-------~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 10 RYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTD-DA-------IDTYAQGIEVAREE 74 (100)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHH-HH-------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHH-HH-------HHHHHHHHhhhhcC
Confidence 3456777889999999999999999999999999999998887765221 11 44456677766654
No 181
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=65.27 E-value=3.4 Score=33.42 Aligned_cols=29 Identities=21% Similarity=0.350 Sum_probs=24.9
Q ss_pred eeeecCccccccCChHHHHHHhHhhhccc
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+-+.|+.|++.|.....|..|+..-|.+.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~~H~~~ 39 (54)
T 2eps_A 11 KPYICQSCGKGFSRPDHLNGHIKQVHTSE 39 (54)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHTSCCC
T ss_pred CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence 34789999999999999999998778653
No 182
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.24 E-value=3.2 Score=32.04 Aligned_cols=28 Identities=21% Similarity=0.287 Sum_probs=24.0
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+..-|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~~H~~~ 39 (47)
T 2epx_A 12 PYECIECGKAFIQNTSLIRHWRYYHTGE 39 (47)
T ss_dssp SBCCSSSCCCBSSHHHHHHHHTTTTTTS
T ss_pred CEECCccCchhCChHHHHHHhHhhcCCC
Confidence 4689999999999999999998567654
No 183
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.21 E-value=3.4 Score=30.00 Aligned_cols=25 Identities=16% Similarity=0.231 Sum_probs=21.5
Q ss_pred eeecCccccccCChHHHHHHhHhhhc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHW 354 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~ 354 (1267)
-+.|+.|++.|.....+..|+.. |.
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~-H~ 33 (36)
T 2elq_A 9 PFKCSLCEYATRSKSNLKAHMNR-HS 33 (36)
T ss_dssp SEECSSSSCEESCHHHHHHHHHH-SS
T ss_pred CccCCCCCchhCCHHHHHHHHHH-hc
Confidence 46899999999999999999863 54
No 184
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.17 E-value=2.8 Score=30.58 Aligned_cols=26 Identities=19% Similarity=0.456 Sum_probs=22.1
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|+.|++.|.....+..|+.. |.+
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~-h~~ 34 (37)
T 2elo_A 9 SYSCPVCEKSFSEDRLIKSHIKT-NHP 34 (37)
T ss_dssp CCEETTTTEECSSHHHHHHHHHH-HCS
T ss_pred CcCCCCCCCccCCHHHHHHHHHH-HcC
Confidence 36799999999999999999874 544
No 185
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.77 E-value=3.6 Score=30.91 Aligned_cols=26 Identities=19% Similarity=0.309 Sum_probs=22.3
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
..|+.|++.|.....+..|+.. |.+.
T Consensus 11 ~~C~~C~k~f~~~~~L~~H~~~-H~~~ 36 (42)
T 2yte_A 11 YSCAECKETFSDNNRLVQHQKM-HTVK 36 (42)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHH-TSCC
T ss_pred eECCCCCCccCCHHHHHHHHHH-hCCC
Confidence 5799999999999999999874 6553
No 186
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=64.77 E-value=16 Score=39.78 Aligned_cols=97 Identities=16% Similarity=0.131 Sum_probs=61.9
Q ss_pred HHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCC----chhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhcc-----
Q 037237 50 NNEGLRALSAFQSGDSKKALEMIKESISSHQDS----PHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGR----- 120 (1267)
Q Consensus 50 ~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s----~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l----- 120 (1267)
..=..+|..++..|++.+|+...+..+...|.. +.++..-|.+++.+. +. +--..+ +.+|+.+
T Consensus 10 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g----~~-~~A~~~---~~~al~~~~~~~ 81 (406)
T 3sf4_A 10 LELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLH----DY-AKALEY---HHHDLTLARTIG 81 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTT----CH-HHHHHH---HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhc----CH-HHHHHH---HHHHHHHHHhcc
Confidence 334567888999999999999999999888765 345556666665543 32 222222 2223333
Q ss_pred -CCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 121 -FPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 121 -~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
.|.........|..++.+| .|++|+....+|+.+
T Consensus 82 ~~~~~~~~~~~la~~~~~~g-----~~~~A~~~~~~al~~ 116 (406)
T 3sf4_A 82 DQLGEAKASGNLGNTLKVLG-----NFDEAIVCCQRHLDI 116 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHTT-----CHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHH
Confidence 2333333344555555555 489999999999887
No 187
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.74 E-value=3.7 Score=31.69 Aligned_cols=28 Identities=25% Similarity=0.392 Sum_probs=23.5
Q ss_pred eeeecCccccccCChHHHHHHhHhhhccc
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+-+.|+.|++.|.....|..|+.. |.+.
T Consensus 11 ~~~~C~~C~k~F~~~~~L~~H~~~-H~~~ 38 (46)
T 2em3_A 11 KPYECKVCSKAFTQKAHLAQHQKT-HTGE 38 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHH-HCCC
T ss_pred cCeECCCCCcccCCHHHHHHHHHH-hCCC
Confidence 347899999999999999999974 7653
No 188
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=64.62 E-value=7 Score=35.99 Aligned_cols=101 Identities=11% Similarity=-0.001 Sum_probs=59.1
Q ss_pred hhHHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCC------chhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhcc
Q 037237 47 PEINNEGLRALSAFQSGDSKKALEMIKESISSHQDS------PHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGR 120 (1267)
Q Consensus 47 ~~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s------~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l 120 (1267)
.....-...|.-.+..|++.+|++..++.+...+.. +.++..-|.++..+. +. +.-..| +.+|..+
T Consensus 7 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g----~~-~~A~~~---~~~a~~~ 78 (164)
T 3ro3_A 7 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLG----EF-ETASEY---YKKTLLL 78 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT----CH-HHHHHH---HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcC----CH-HHHHHH---HHHHHHH
Confidence 344555677778889999999999999988654321 124444454444432 22 222233 3334444
Q ss_pred CCch------hhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccC
Q 037237 121 FPNL------VELSFLHAALLYKLAEINDKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 121 ~p~s------~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~ 160 (1267)
+++. .......|.+++.++ .|++|+.-+++|+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~A~~~~~~a~~~~ 119 (164)
T 3ro3_A 79 ARQLKDRAVEAQSCYSLGNTYTLLQ-----DYEKAIDYHLKHLAIA 119 (164)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTT-----CHHHHHHHHHHHHHHH
T ss_pred HHHhCCcHHHHHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHH
Confidence 4432 222234445544444 4899999999998873
No 189
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=64.59 E-value=17 Score=41.34 Aligned_cols=108 Identities=18% Similarity=0.216 Sum_probs=84.5
Q ss_pred hHHHHHHHHHhHhhcCCHH-HHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhh---hhhhhhhhccCCc
Q 037237 48 EINNEGLRALSAFQSGDSK-KALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEH---LTTAASAVGRFPN 123 (1267)
Q Consensus 48 ~i~~e~~~a~~~~~~Gnh~-kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~---l~~~~~Av~l~p~ 123 (1267)
..+.-.+.++..-+.|++. +||.....++..+|...-+....|.+...+....... .....| |.....+...+|+
T Consensus 28 ~y~~~~~~~~~~~~~~e~s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~-~~~~~l~~EL~~~~~~L~~~PK 106 (331)
T 3dss_A 28 LYQSATQAVFQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPE-ESAALVKAELGFLESCLRVNPK 106 (331)
T ss_dssp HHHHHHHHHHHHHHTTCCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHH-HHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccccch-hhhHHHHHHHHHHHHHHHhCCC
Confidence 3444555666667789988 8999999999999999999999999998887643211 222223 6667779999999
Q ss_pred hhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 124 LVELSFLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 124 s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
+..+-+.+.-+|..++. ..|++++.-|.++|.+
T Consensus 107 ny~aW~hR~wlL~~l~~---~~~~~EL~~~~k~l~~ 139 (331)
T 3dss_A 107 SYGTWHHRCWLLSRLPE---PNWARELELCARFLEA 139 (331)
T ss_dssp CHHHHHHHHHHHHHCSS---CCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCc---ccHHHHHHHHHHHHHh
Confidence 99999999988887763 2589999999999997
No 190
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.44 E-value=3.7 Score=31.32 Aligned_cols=27 Identities=15% Similarity=0.220 Sum_probs=23.0
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
=+.|+.|++.|.....+..|+.. |.+.
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~ 36 (44)
T 2emx_A 10 PFGCSCCEKAFSSKSYLLVHQQT-HAEE 36 (44)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH-HTSS
T ss_pred CccCCCCCcccCCHHHHHHHHHH-hCCC
Confidence 37899999999999999999874 6543
No 191
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.44 E-value=3.4 Score=31.78 Aligned_cols=27 Identities=22% Similarity=0.191 Sum_probs=23.1
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+.. |.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~ 38 (46)
T 2ep1_A 12 PYECSDCGKSFIKKSQLHVHQRI-HTGE 38 (46)
T ss_dssp SSCCSSSCCCCSSHHHHHHHHGG-GSSS
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-hCCC
Confidence 36899999999999999999874 6553
No 192
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=64.35 E-value=12 Score=40.59 Aligned_cols=87 Identities=10% Similarity=-0.072 Sum_probs=64.5
Q ss_pred hcCCH-------HHHHHHHHHHHh-hCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhh-hHHHH
Q 037237 61 QSGDS-------KKALEMIKESIS-SHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVE-LSFLH 131 (1267)
Q Consensus 61 ~~Gnh-------~kAL~~~kd~~~-~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~-~a~f~ 131 (1267)
+.|+. .+|+.+.+..+. .+|+++.++..-|.+...+. +. +-- ...+.+|+.+.|+... +-..+
T Consensus 69 ~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~----~~-~~A---~~~~~~al~~~p~~~~~~~~~~ 140 (308)
T 2ond_A 69 EKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRM----KY-EKV---HSIYNRLLAIEDIDPTLVYIQY 140 (308)
T ss_dssp HTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHTSSSSCTHHHHHHH
T ss_pred hccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcC----CH-HHH---HHHHHHHHhccccCccHHHHHH
Confidence 35885 899999999998 48999888888887776543 21 111 3446779999999886 44566
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHhccC
Q 037237 132 AALLYKLAEINDKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 132 A~lL~~la~~~~~~Y~~a~~ec~RaL~i~ 160 (1267)
+..+...+. |++|....+||+...
T Consensus 141 ~~~~~~~~~-----~~~A~~~~~~a~~~~ 164 (308)
T 2ond_A 141 MKFARRAEG-----IKSGRMIFKKAREDA 164 (308)
T ss_dssp HHHHHHHHC-----HHHHHHHHHHHHTST
T ss_pred HHHHHHhcC-----HHHHHHHHHHHHhcC
Confidence 766666554 799999999999873
No 193
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=64.22 E-value=6.8 Score=42.38 Aligned_cols=102 Identities=15% Similarity=0.012 Sum_probs=63.8
Q ss_pred HHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHH------------HHhCCCcchhhhh---------
Q 037237 52 EGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLA------------EKAGKGTDTQLEH--------- 110 (1267)
Q Consensus 52 e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA------------~~~~~~~~~k~~~--------- 110 (1267)
-...|.-+.+.|++.+|+..++.+...+|+....+..-|..+.... -.. +|.+....|
T Consensus 154 ~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~-~P~~~~~~~~la~~l~~~ 232 (287)
T 3qou_A 154 GLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAE-NPEDAALATQLALQLHQV 232 (287)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhc-CCccHHHHHHHHHHHHHc
Confidence 3455666778899999999999988877855444433333332221 122 331222222
Q ss_pred ------hhhhhhhhccCCch--hhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 111 ------LTTAASAVGRFPNL--VELSFLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 111 ------l~~~~~Av~l~p~s--~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
+..+++++.+.|+. ...-...+.++-.+|. +++++...+|+|+.
T Consensus 233 g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~-----~~~a~~~~r~al~~ 284 (287)
T 3qou_A 233 GRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGT-----GDALASXYRRQLYA 284 (287)
T ss_dssp TCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCT-----TCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCC-----CCcHHHHHHHHHHH
Confidence 45678899999988 4455566666666665 47788888888753
No 194
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=63.86 E-value=5.4 Score=46.77 Aligned_cols=107 Identities=12% Similarity=0.020 Sum_probs=67.0
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCc-hhhhhhhHHHHHH------------HHHhCCCcchhh-------h---
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSP-HLHCLEAFIHHSL------------AEKAGKGTDTQL-------E--- 109 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~-~~h~~qg~v~~~l------------A~~~~~~~~~k~-------~--- 109 (1267)
...|.-..+.|++.+|..+.+.++...|..+ .++..-|.+..++ |... +|..... .
T Consensus 325 ~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~-~~~~~~~~~~~a~~~~~~ 403 (530)
T 2ooe_A 325 FAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARED-ARTRHHVYVTAALMEYYC 403 (530)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-TTCCTHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-cCCchHHHHHHHHHHHHH
Confidence 4445555668999999999999998877653 5665555443322 2211 1101000 0
Q ss_pred ---h---hhhhhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCcc
Q 037237 110 ---H---LTTAASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYDTL 166 (1267)
Q Consensus 110 ---~---l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp~ 166 (1267)
+ ...+.+|+..+|+++.+-.-+|.++..+|+ +++|..-.+||+.. .|.+|.
T Consensus 404 ~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~-----~~~Ar~~~~~al~~-~~~~~~ 460 (530)
T 2ooe_A 404 SKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNE-----DNNTRVLFERVLTS-GSLPPE 460 (530)
T ss_dssp TCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTC-----HHHHHHHHHHHHHS-CCSCGG
T ss_pred cCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCC-----HhhHHHHHHHHHhc-cCCCHH
Confidence 0 223556888889888888788887777664 68888888888876 354443
No 195
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=63.86 E-value=4 Score=31.00 Aligned_cols=27 Identities=22% Similarity=0.266 Sum_probs=22.9
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+.. |.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~ 38 (44)
T 2eof_A 12 PYECNECQKAFNTKSNLMVHQRT-HTGE 38 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHHHH-TTTS
T ss_pred CeECCCCCcccCCHhHHHHHHHH-hCCC
Confidence 36899999999999999999874 6553
No 196
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=63.78 E-value=4 Score=33.92 Aligned_cols=26 Identities=23% Similarity=0.326 Sum_probs=23.5
Q ss_pred eeecCccccccCChHHHHHHhHhhhc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHW 354 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~ 354 (1267)
-+.|+.|++.|.....+..|+...|.
T Consensus 10 ~~~C~~C~k~f~~~~~l~~H~~~~H~ 35 (66)
T 2drp_A 10 TYRCKVCSRVYTHISNFCRHYVTSHK 35 (66)
T ss_dssp EEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred ceECCCCcchhCCHHHHHHHHHHHcC
Confidence 36899999999999999999998784
No 197
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=63.75 E-value=9.2 Score=35.13 Aligned_cols=65 Identities=14% Similarity=0.090 Sum_probs=51.5
Q ss_pred HHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCc
Q 037237 51 NEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPN 123 (1267)
Q Consensus 51 ~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~ 123 (1267)
.-...|.-.+..|++.+|++..+..+..+|+.+.++..-|.+++.+. +. +.- +..+++|+.+.|+
T Consensus 45 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~----~~-~~A---~~~~~~a~~~~p~ 109 (137)
T 3q49_B 45 YYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEME----SY-DEA---IANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHh----hH-HHH---HHHHHHHHHHChh
Confidence 44566778889999999999999999999999999999999888764 21 111 4456678888888
No 198
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=63.63 E-value=3.4 Score=36.72 Aligned_cols=27 Identities=19% Similarity=0.361 Sum_probs=23.5
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+.|+.|++.|.....|..|+...|.+.
T Consensus 66 ~~C~~C~~~f~~~~~L~~H~~~~H~~~ 92 (95)
T 2yt9_A 66 YICQSCGKGFSRPDHLNGHIKQVHSGP 92 (95)
T ss_dssp BCCSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred eECCCccchhCCHHHHHHHHHHhcCCC
Confidence 679999999999999999998888763
No 199
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=63.55 E-value=4.1 Score=31.38 Aligned_cols=26 Identities=23% Similarity=0.281 Sum_probs=22.3
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+.|+.|++.|.....|..|+.. |.+.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~~-H~~~ 38 (46)
T 2emi_A 13 YECSECGKAFIQKSTLSMHQRI-HRGE 38 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHGG-GCSC
T ss_pred CCCCCCCcccCCHHHHHHHHhH-hCCC
Confidence 6899999999999999999874 6543
No 200
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=63.46 E-value=15 Score=38.28 Aligned_cols=103 Identities=9% Similarity=-0.054 Sum_probs=63.7
Q ss_pred hhHHHHHHHHHhHhhcCCHHHHHHHHHHHHhh--------CCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhh-----
Q 037237 47 PEINNEGLRALSAFQSGDSKKALEMIKESISS--------HQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTT----- 113 (1267)
Q Consensus 47 ~~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~--------h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~----- 113 (1267)
.....-...|.-.+..|++.+|++.+++.+.. ++..+.++..-|.++..+. +. +--..++..
T Consensus 151 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g----~~-~~A~~~~~~al~~~ 225 (311)
T 3nf1_A 151 DVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQG----KF-KQAETLYKEILTRA 225 (311)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHT----CH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcC----CH-HHHHHHHHHHHHHH
Confidence 34445566777888999999999999999876 4445556666666666543 21 111111111
Q ss_pred -----------------------------------------hhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHH
Q 037237 114 -----------------------------------------AASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEA 152 (1267)
Q Consensus 114 -----------------------------------------~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~e 152 (1267)
..++....|.....-...|.+++.+|+ |++|+.-
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~-----~~~A~~~ 300 (311)
T 3nf1_A 226 HEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGK-----FEAAETL 300 (311)
T ss_dssp HHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTC-----HHHHHHH
T ss_pred HHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCC-----HHHHHHH
Confidence 112222445555666666777666664 7999999
Q ss_pred HHHHhcc
Q 037237 153 CERMLKI 159 (1267)
Q Consensus 153 c~RaL~i 159 (1267)
.++|+.+
T Consensus 301 ~~~al~l 307 (311)
T 3nf1_A 301 EEAAMRS 307 (311)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999887
No 201
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=63.43 E-value=3.5 Score=31.73 Aligned_cols=27 Identities=22% Similarity=0.190 Sum_probs=22.8
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
=+.|+.|++.|.....+..|+.. |.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~ 38 (46)
T 2eop_A 12 PHECRECGKSFSFNSQLIVHQRI-HTGE 38 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTT-TTTS
T ss_pred CeeCCCCCchhCCHHHHHHHHHH-cCCC
Confidence 36899999999999999999874 6553
No 202
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.26 E-value=3.6 Score=30.89 Aligned_cols=25 Identities=24% Similarity=0.260 Sum_probs=21.8
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|+.|++.|.....+..|+. -|.+
T Consensus 11 ~~C~~C~k~f~~~~~L~~H~~-~H~~ 35 (41)
T 2ept_A 11 YECQECGKSFRQKGSLTLHER-IHTG 35 (41)
T ss_dssp EECSSSCCEESSHHHHHHHGG-GCCC
T ss_pred eECCCCCCCcCCHHHHHHHHH-HhCC
Confidence 579999999999999999986 4654
No 203
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=63.01 E-value=3.8 Score=35.35 Aligned_cols=28 Identities=21% Similarity=0.195 Sum_probs=24.9
Q ss_pred eecCccccccCChHHHHHHhHhhhcccC
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNHL 357 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~l 357 (1267)
+.|+.|++.|.....+..|+...|...-
T Consensus 46 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~ 73 (77)
T 2ct1_A 46 FHCPHCDTVIARKSDLGVHLRKQHSYSG 73 (77)
T ss_dssp EECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred cCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence 6899999999999999999998886543
No 204
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.81 E-value=4.2 Score=31.45 Aligned_cols=27 Identities=19% Similarity=0.161 Sum_probs=22.9
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....|..|+.. |.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~ 38 (46)
T 2yto_A 12 PYKCSDCGKAFTRKSGLHIHQQS-HTGE 38 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HTCC
T ss_pred CEECcccCCccCCHhHHHHHHHH-cCCC
Confidence 46899999999999999999874 6553
No 205
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=62.71 E-value=4.2 Score=31.33 Aligned_cols=27 Identities=15% Similarity=0.218 Sum_probs=23.0
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+.. |.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~ 38 (46)
T 2ema_A 12 RYKCNECGKVFSRNSQLSQHQKI-HTGE 38 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTG-GGCC
T ss_pred CcCCCCCcchhCCHHHHHHHHHh-cCCC
Confidence 47899999999999999999874 6553
No 206
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=62.50 E-value=4.6 Score=34.10 Aligned_cols=28 Identities=21% Similarity=0.322 Sum_probs=22.8
Q ss_pred eecCccccccCChHHHHHHhHhhhcccC
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNHL 357 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~l 357 (1267)
+.|+.|++.|.....|..|+..-|-..-
T Consensus 38 ~~C~~C~~~f~~~~~L~~H~~~h~~~~p 65 (70)
T 1x5w_A 38 FKCNYCSFDTKQPSNLSKHMKKFHGDMS 65 (70)
T ss_dssp EECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred EeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence 6899999999999999999886665433
No 207
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=62.37 E-value=9.4 Score=33.38 Aligned_cols=48 Identities=15% Similarity=0.306 Sum_probs=39.7
Q ss_pred hhhhhhhhccCCchhh-hHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 111 LTTAASAVGRFPNLVE-LSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 111 l~~~~~Av~l~p~s~~-~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
+..+.+|+.+.|++.. .-...|..++.+++ |++|+...++++.+ +|.+
T Consensus 20 ~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~-----~~~A~~~~~~al~~-~p~~ 68 (99)
T 2kc7_A 20 LQALEEFLQTEPVGKDEAYYLMGNAYRKLGD-----WQKALNNYQSAIEL-NPDS 68 (99)
T ss_dssp HHHHHHHHHHCSSTHHHHHHHHHHHHHHHTC-----HHHHHHHHHHHHHH-CTTS
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHHcCC-----HHHHHHHHHHHHhc-CCCc
Confidence 4456779999999998 77788888888775 89999999999998 4554
No 208
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.28 E-value=3.7 Score=34.23 Aligned_cols=23 Identities=13% Similarity=0.200 Sum_probs=20.7
Q ss_pred eecCccccccCChHHHHHHhHhh
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSS 352 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~e 352 (1267)
-.||.|+.+|.-.++++.||.-+
T Consensus 13 ~~CPrCn~~f~~~~sLr~Hmkyc 35 (49)
T 2e72_A 13 KICPRCNAQFRVTEALRGHMCYC 35 (49)
T ss_dssp CCCTTTCCCCSSHHHHHHHHHHH
T ss_pred eeCCcccccccchHHHHhhhhhc
Confidence 37999999999999999999844
No 209
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.15 E-value=3.7 Score=30.01 Aligned_cols=25 Identities=16% Similarity=0.154 Sum_probs=21.3
Q ss_pred eeecCccccccCCh-HHHHHHhHhhhc
Q 037237 329 FSECFVCVEKIGNP-QLCEKHFRSSHW 354 (1267)
Q Consensus 329 fW~C~~C~~kF~d~-~~~~~H~~~eH~ 354 (1267)
-..|+.|++.|... ..+..|+. -|.
T Consensus 9 ~~~C~~C~k~f~~~~~~L~~H~~-~H~ 34 (37)
T 2elp_A 9 AMKCPYCDFYFMKNGSDLQRHIW-AHE 34 (37)
T ss_dssp CEECSSSSCEECSSCHHHHHHHH-HHH
T ss_pred CeECCCCChhhccCHHHHHHHHH-hcC
Confidence 36899999999999 99999986 354
No 210
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=61.92 E-value=39 Score=39.19 Aligned_cols=103 Identities=17% Similarity=0.135 Sum_probs=68.2
Q ss_pred HHHHHHhHhhcCC---HHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhh---hhhhhccCCchh
Q 037237 52 EGLRALSAFQSGD---SKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTT---AASAVGRFPNLV 125 (1267)
Q Consensus 52 e~~~a~~~~~~Gn---h~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~---~~~Av~l~p~s~ 125 (1267)
-+-||...+.+++ +.+|+.+++..++.-|+.+.+|-.-+..++.+...-..+ .....=+.. +..++.+.|+..
T Consensus 199 l~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~-~~~~~~l~~a~~a~~a~~~~~~~a 277 (372)
T 3ly7_A 199 NFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLD-EKQLAALNTEIDNIVTLPELNNLS 277 (372)
T ss_dssp HHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCC-HHHHHHHHHHHHHHHTCGGGTTCH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCc-hhhHHHHHHHHHHHHhcccCCcCH
Confidence 3467777776655 589999999999999999888887777666443332122 111110111 223556777777
Q ss_pred hhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccC
Q 037237 126 ELSFLHAALLYKLAEINDKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 126 ~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~ 160 (1267)
.....+|..++..|+ +++|+...+|||.+.
T Consensus 278 ~~~~alal~~l~~gd-----~d~A~~~l~rAl~Ln 307 (372)
T 3ly7_A 278 IIYQIKAVSALVKGK-----TDESYQAINTGIDLE 307 (372)
T ss_dssp HHHHHHHHHHHHHTC-----HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCC-----HHHHHHHHHHHHhcC
Confidence 666666655554454 899999999999994
No 211
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=61.91 E-value=4.1 Score=30.60 Aligned_cols=26 Identities=19% Similarity=0.074 Sum_probs=22.2
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|+.|++.|.....+..|+. -|.+
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~-~H~~ 36 (42)
T 2epc_A 11 PYLCGQCGKSFTQRGSLAVHQR-SCSQ 36 (42)
T ss_dssp CEECSSSCCEESSHHHHHHHHH-HTTC
T ss_pred CeECCCCCcccCCHHHHHHHhh-hcCC
Confidence 3689999999999999999986 4544
No 212
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.80 E-value=4.1 Score=31.39 Aligned_cols=27 Identities=19% Similarity=0.263 Sum_probs=22.8
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+.. |.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~ 38 (46)
T 2ene_A 12 PYKCNECGKVFRHNSYLSRHQRI-HTGE 38 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TCCC
T ss_pred CeECCCCCchhCChHHHHHHHhh-cCCC
Confidence 36899999999999999999874 6543
No 213
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.68 E-value=4.2 Score=31.42 Aligned_cols=26 Identities=19% Similarity=0.474 Sum_probs=22.6
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+.|+.|++.|.....|..|+.. |.+.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~~-H~~~ 38 (46)
T 2eoo_A 13 YGCNECGKNFGRHSHLIEHLKR-HFRE 38 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHHH-HHST
T ss_pred EEccccCcccCCHHHHHHHHHH-HcCC
Confidence 6899999999999999999875 6553
No 214
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.66 E-value=4.1 Score=31.46 Aligned_cols=26 Identities=19% Similarity=0.304 Sum_probs=22.3
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+.|+.|++.|.....+..|+. -|.+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2em5_A 13 HQCHECGRGFTLKSHLNQHQR-IHTGE 38 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHT-TTSCS
T ss_pred eECCcCCCccCCHHHHHHHHH-HhCCC
Confidence 679999999999999999986 46543
No 215
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=61.50 E-value=3.7 Score=31.74 Aligned_cols=27 Identities=15% Similarity=0.247 Sum_probs=22.9
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....|..|+.. |.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~ 38 (46)
T 2ely_A 12 PFKCVECGKGFSRRSALNVHHKL-HTGE 38 (46)
T ss_dssp SBCCSSSCCCBSSTTHHHHHHHH-HSCC
T ss_pred CcccCccCcccCCHHHHHHHHHH-cCCC
Confidence 36899999999999999999874 6553
No 216
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.22 E-value=4.2 Score=31.40 Aligned_cols=26 Identities=19% Similarity=0.335 Sum_probs=22.4
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+.|+.|++.|.....+..|+.. |.+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~~-H~~~ 38 (46)
T 2ytq_A 13 YGCSECGKAFSSKSYLIIHMRT-HSGE 38 (46)
T ss_dssp CBCSSSCCBCSCHHHHHHHHTT-TCCS
T ss_pred cCCCccChhhCChHHHHHHHHH-hCCC
Confidence 6899999999999999999874 6553
No 217
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.20 E-value=4.2 Score=31.28 Aligned_cols=28 Identities=21% Similarity=0.246 Sum_probs=23.4
Q ss_pred eeeecCccccccCChHHHHHHhHhhhccc
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+-+.|+.|++.|.....+..|+.. |.+.
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~-H~~~ 38 (46)
T 2epw_A 11 KPCKCTECGKAFCWKSQLIMHQRT-HVDD 38 (46)
T ss_dssp CSEECSSSCCEESSSHHHHHHHHH-CCSC
T ss_pred CCeeCCCCCCccCCHHHHHHHHHH-hCCC
Confidence 346899999999999999999874 6553
No 218
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=61.14 E-value=4.2 Score=30.62 Aligned_cols=27 Identities=22% Similarity=0.283 Sum_probs=22.8
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. -|.+.
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 36 (42)
T 2el5_A 10 PYECSECGKAFNRKDQLISHQR-THAGE 36 (42)
T ss_dssp SEECSSSCCEESSHHHHHHHHG-GGCCC
T ss_pred CccCCCcChhhCCHHHHHHHHH-hcCCC
Confidence 3689999999999999999986 46553
No 219
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=61.00 E-value=8 Score=41.71 Aligned_cols=97 Identities=9% Similarity=-0.036 Sum_probs=56.3
Q ss_pred HHHHHHhHhhcCCHHHHHHHHHHHHhhCCCC------chhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchh
Q 037237 52 EGLRALSAFQSGDSKKALEMIKESISSHQDS------PHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLV 125 (1267)
Q Consensus 52 e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s------~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~ 125 (1267)
-...+.-+...|++.+|+...+..+..++.. +.++.--|.++... +.+. +-- +..+++|+.++|+.-
T Consensus 80 ~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~---lg~~-~~A---~~~~~~Al~~~~~~~ 152 (292)
T 1qqe_A 80 YVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILEND---LHDY-AKA---IDCYELAGEWYAQDQ 152 (292)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT---TCCH-HHH---HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh---hcCH-HHH---HHHHHHHHHHHHhCC
Confidence 3445555667789999998888888665321 22333333333321 1222 111 444677888888542
Q ss_pred ------hhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccC
Q 037237 126 ------ELSFLHAALLYKLAEINDKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 126 ------~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~ 160 (1267)
..-.-.|.+++.++ .|++|+.-.++++.+.
T Consensus 153 ~~~~~~~~~~~lg~~~~~~g-----~~~~A~~~~~~al~~~ 188 (292)
T 1qqe_A 153 SVALSNKCFIKCADLKALDG-----QYIEASDIYSKLIKSS 188 (292)
T ss_dssp CHHHHHHHHHHHHHHHHHTT-----CHHHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHHHHHHhC-----CHHHHHHHHHHHHHHH
Confidence 11122344444444 4899999999999983
No 220
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.86 E-value=3.7 Score=31.64 Aligned_cols=27 Identities=15% Similarity=0.052 Sum_probs=22.7
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....|..|+. -|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2emg_A 12 PFICSECGKVFTHKTNLIIHQK-IHTGE 38 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHT-TTSCC
T ss_pred CEECCccCcccCCHHHHHHHHH-HhCCC
Confidence 3689999999999999999986 46553
No 221
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=60.79 E-value=9.6 Score=33.49 Aligned_cols=48 Identities=19% Similarity=0.173 Sum_probs=40.4
Q ss_pred hhhhhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 111 LTTAASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 111 l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
+..+.+|+.+.|++...-...|..++.+++ |++|+..+++||.+ +|.+
T Consensus 24 ~~~~~~al~~~p~~~~~~~~lg~~~~~~g~-----~~~A~~~~~~al~~-~p~~ 71 (111)
T 2l6j_A 24 VHCYDQLITAQPQNPVGYSNKAMALIKLGE-----YTQAIQMCQQGLRY-TSTA 71 (111)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHTS-CSST
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHhcC-----HHHHHHHHHHHHHh-CCCc
Confidence 555777999999999888888998888775 89999999999998 4543
No 222
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=60.77 E-value=4.9 Score=30.85 Aligned_cols=27 Identities=26% Similarity=0.233 Sum_probs=22.7
Q ss_pred eeeecCccccccCChHHHHHHhHhhhcc
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+-+.|+.|++.|.....+..|+.. |.+
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~ 37 (46)
T 2em9_A 11 KPYNCKECGKSFRWASCLLKHQRV-HSG 37 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHGGG-GTS
T ss_pred cCeECCccccccCChHHHHHHHHH-hCC
Confidence 346899999999999999999864 654
No 223
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.54 E-value=4.2 Score=29.50 Aligned_cols=25 Identities=24% Similarity=0.503 Sum_probs=21.5
Q ss_pred eeecCccccccCChHHHHHHhHhhhc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHW 354 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~ 354 (1267)
-..|+.|++.|.....+..|+.. |.
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~-H~ 33 (36)
T 2elv_A 9 LYDCHICERKFKNELDRDRHMLV-HG 33 (36)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT-TS
T ss_pred CeECCCCCCccCCHHHHHHHHHH-hc
Confidence 46899999999999999999863 54
No 224
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=60.19 E-value=4.5 Score=31.27 Aligned_cols=27 Identities=22% Similarity=0.244 Sum_probs=22.9
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
=+.|+.|++.|.....|..|+. -|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2emj_A 12 PFECAECGKSFSISSQLATHQR-IHTGE 38 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHH-HHTTS
T ss_pred CEECCCCCcccCCHHHHHHHHH-HhCCC
Confidence 3689999999999999999987 46553
No 225
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.04 E-value=5 Score=30.82 Aligned_cols=27 Identities=19% Similarity=0.195 Sum_probs=22.8
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+.. |.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~ 38 (46)
T 2emm_A 12 PHKCNECGKSFIQSAHLIQHQRI-HTGE 38 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HSCC
T ss_pred CeeCCCCChhhCCHHHHHHHHHH-hCCC
Confidence 36899999999999999999874 6553
No 226
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.96 E-value=3.6 Score=30.95 Aligned_cols=26 Identities=19% Similarity=0.198 Sum_probs=22.2
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|+.|++.|.....+..|+. -|.+
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~-~H~~ 36 (42)
T 2ytb_A 11 PYRCDQCGKAFSQKGSLIVHIR-VHTG 36 (42)
T ss_dssp SBCCTTTTCCBSSHHHHHTTGG-GTSC
T ss_pred CeeCCCccchhCCHHHHHHHHH-HhCC
Confidence 3689999999999999999986 4654
No 227
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=64.31 E-value=1.9 Score=29.64 Aligned_cols=22 Identities=23% Similarity=0.600 Sum_probs=19.7
Q ss_pred eecCccccccCChHHHHHHhHh
Q 037237 330 SECFVCVEKIGNPQLCEKHFRS 351 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~ 351 (1267)
..|+.|++.|.....+..|+..
T Consensus 4 ~~C~~C~k~f~~~~~l~~H~~~ 25 (30)
T 2lvr_A 4 YVCIHCQRQFADPGALQRHVRI 25 (30)
Confidence 4799999999999999999863
No 228
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.76 E-value=4.1 Score=31.46 Aligned_cols=27 Identities=22% Similarity=0.304 Sum_probs=22.8
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....|..|+.. |.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~ 38 (46)
T 2eoz_A 12 PYSCNVCGKAFVLSAHLNQHLRV-HTQE 38 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHHHH-HSSC
T ss_pred CeECcccChhhCCHHHHHHHHHH-hCCC
Confidence 36799999999999999999874 6543
No 229
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.72 E-value=4.6 Score=31.12 Aligned_cols=27 Identities=19% Similarity=0.313 Sum_probs=23.0
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+.. |.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~ 38 (46)
T 2en6_A 12 PYGCNECGKTFSQKSILSAHQRT-HTGE 38 (46)
T ss_dssp CEEETTTTEEESSHHHHHHHHHH-HSSC
T ss_pred CeECCCCCcccCchHHHHHHHHH-cCCC
Confidence 36899999999999999999874 6553
No 230
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.68 E-value=4.5 Score=31.10 Aligned_cols=27 Identities=19% Similarity=0.170 Sum_probs=22.8
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. -|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2yts_A 12 PYICNECGKSFIQKSHLNRHRR-IHTGE 38 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGG-GTSSC
T ss_pred CEECCCCChhhCChHHHHHHHH-hcCCC
Confidence 4689999999999999999986 56543
No 231
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.67 E-value=4.6 Score=31.13 Aligned_cols=26 Identities=19% Similarity=0.350 Sum_probs=22.4
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+.|+.|++.|.....+..|+. -|.+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2eq2_A 13 YQCNECGKAFSQTSKLARHQR-VHTGE 38 (46)
T ss_dssp SSCCSSCCCCSSHHHHHHHGG-GGCCC
T ss_pred eECCCCCcccCCHHHHHHHHH-HcCCC
Confidence 579999999999999999986 46653
No 232
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.59 E-value=4.1 Score=31.38 Aligned_cols=27 Identities=15% Similarity=0.129 Sum_probs=22.6
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. -|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2enf_A 12 PYKCNECGKVFTQNSHLVRHRG-IHTGE 38 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHT-TTTTS
T ss_pred CeECCCCCcccCCHHHHHHHHH-hhCCC
Confidence 3689999999999999999986 46543
No 233
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.52 E-value=5.4 Score=30.69 Aligned_cols=26 Identities=15% Similarity=0.038 Sum_probs=22.3
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|+.|++.|.....+..|+.. |.+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~ 37 (46)
T 2em7_A 12 PYKCEECGKGFICRRDLYTHHMV-HTG 37 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHGGG-GTT
T ss_pred CccCCCccchhCCHHHHHHHHHH-hCC
Confidence 46899999999999999999864 654
No 234
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=59.51 E-value=13 Score=34.71 Aligned_cols=65 Identities=11% Similarity=0.042 Sum_probs=46.9
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchh
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLV 125 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~ 125 (1267)
...|.-.++.|++.+|+...+..+...|+.+.++..-|.++..+..-- .. +..+++++.+.|+..
T Consensus 55 ~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g~~~-~A-------~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 55 RSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNAN-AA-------LASLRAWLLSQPQYE 119 (121)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHH-HH-------HHHHHHHHC------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH-HH-------HHHHHHHHHhCcCCC
Confidence 345666778999999999999999999999999999999888776432 22 455667888888764
No 235
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.46 E-value=4.4 Score=30.50 Aligned_cols=27 Identities=15% Similarity=0.148 Sum_probs=22.9
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. -|.+.
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 37 (42)
T 2en2_A 11 PYKCETCGARFVQVAHLRAHVL-IHTGS 37 (42)
T ss_dssp SEECTTTCCEESSHHHHHHHTH-HHHSC
T ss_pred CEeCCCcChhhCCHHHHHHHHH-HcCCC
Confidence 4789999999999999999987 56543
No 236
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.15 E-value=4.4 Score=31.24 Aligned_cols=26 Identities=15% Similarity=0.155 Sum_probs=22.4
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|+.|++.|.....+..|+.. |.+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~ 37 (46)
T 2ysp_A 12 PYKCEKCGKGYNSKFNLDMHQKV-HTG 37 (46)
T ss_dssp SEEETTTTEEESCHHHHHHHHTT-SCS
T ss_pred CeECCCCCCccCCHHHHHHHHHh-hCC
Confidence 47899999999999999999874 654
No 237
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.08 E-value=4.6 Score=31.21 Aligned_cols=25 Identities=20% Similarity=0.282 Sum_probs=21.9
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|+.|++.|.....+..|+. -|.+
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~-~H~~ 37 (46)
T 2en9_A 13 FKCNECKKTFTQSSSLTVHQR-IHTG 37 (46)
T ss_dssp CBCTTTCCBCSSHHHHHHHHH-HHTS
T ss_pred EECCccCcccCCHHHHHHHHH-HcCC
Confidence 679999999999999999987 4654
No 238
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.92 E-value=4.9 Score=30.97 Aligned_cols=27 Identities=15% Similarity=0.178 Sum_probs=22.8
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. -|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2eq0_A 12 PYKCHECGKVFRRNSHLARHQL-IHTGE 38 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHT-TTCCC
T ss_pred CeECCCCCchhCCHHHHHHHHH-HcCCC
Confidence 3689999999999999999986 46553
No 239
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=58.90 E-value=5.1 Score=30.83 Aligned_cols=27 Identities=15% Similarity=0.127 Sum_probs=22.8
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-..|+.|++.|.....+..|+.. |.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~ 38 (46)
T 2em0_A 12 TWKCRECDMCFSQASSLRLHQNV-HVGE 38 (46)
T ss_dssp CCCCSSSCCCCSSHHHHHHHGGG-GSSS
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCCC
Confidence 36799999999999999999874 7553
No 240
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.81 E-value=4.8 Score=31.07 Aligned_cols=26 Identities=19% Similarity=0.259 Sum_probs=22.4
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|+.|++.|.....|..|+. -|.+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~ 37 (46)
T 2emf_A 12 HFECTECGKAFTRKSTLSMHQK-IHTG 37 (46)
T ss_dssp CEECSSSCCEESCHHHHHHHGG-GTSC
T ss_pred CeECCCCCchhCCHHHHHHHHH-HhCC
Confidence 3689999999999999999987 4654
No 241
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.76 E-value=4.8 Score=30.92 Aligned_cols=27 Identities=19% Similarity=0.206 Sum_probs=22.7
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....|..|+. -|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2eor_A 12 PYNCEECGKAFIHDSQLQEHQR-IHTGE 38 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHH-HHHSC
T ss_pred CccCCCCCCCcCCHHHHHHHHH-hcCCC
Confidence 3679999999999999999987 46543
No 242
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=58.69 E-value=5 Score=29.82 Aligned_cols=25 Identities=20% Similarity=0.389 Sum_probs=21.8
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
..|..|++.|.....+..|+. -|.+
T Consensus 7 ~~C~~C~k~f~~~~~L~~H~~-~H~~ 31 (39)
T 1njq_A 7 YTCSFCKREFRSAQALGGHMN-VHRR 31 (39)
T ss_dssp EECTTTCCEESSHHHHHHHHH-TTCC
T ss_pred eECCCCCcccCCHHHHHHHHH-HcCC
Confidence 579999999999999999987 4654
No 243
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.67 E-value=4.9 Score=30.85 Aligned_cols=27 Identities=22% Similarity=0.250 Sum_probs=22.8
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. -|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2ytf_A 12 PFECSECQKAFNTKSNLIVHQR-THTGE 38 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-TSCSS
T ss_pred CcCCCCCCcccCCHHHHHHHHH-HhCCC
Confidence 3689999999999999999986 46543
No 244
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.66 E-value=5.9 Score=30.41 Aligned_cols=27 Identities=22% Similarity=0.226 Sum_probs=22.9
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. -|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2eme_A 12 PYVCDYCGKAFGLSAELVRHQR-IHTGE 38 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHG-GGCCC
T ss_pred CeECCCCChhhCCHHHHHHHHH-hcCCC
Confidence 4789999999999999999986 56543
No 245
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.62 E-value=4.9 Score=30.89 Aligned_cols=27 Identities=15% Similarity=0.151 Sum_probs=23.1
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. -|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2eow_A 12 PYKCNECGKAFRARSSLAIHQA-THSGE 38 (46)
T ss_dssp CEECTTSCCEESSHHHHHHHHH-HHCCC
T ss_pred CeeccccCChhcCHHHHHHHHH-HcCCC
Confidence 4689999999999999999987 46654
No 246
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.50 E-value=3.7 Score=31.74 Aligned_cols=25 Identities=16% Similarity=0.345 Sum_probs=21.9
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|+.|++.|.....+..|+.. |.+
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~~-H~~ 37 (46)
T 2ytt_A 13 YQCSECGKSFSGSYRLTQHWIT-HTR 37 (46)
T ss_dssp TCCSSSCCCCSSHHHHHHHHTH-HHH
T ss_pred eeCCCCCcccCCHHHHHHHHHH-cCC
Confidence 6799999999999999999874 654
No 247
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.44 E-value=4.6 Score=31.03 Aligned_cols=26 Identities=19% Similarity=0.202 Sum_probs=22.3
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|+.|++.|.....|..|+. -|.+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~ 37 (46)
T 2yrj_A 12 PYRCGECGKAFAQKANLTQHQR-IHTG 37 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHT-TTSS
T ss_pred CeECCCCCCccCCHHHHHHHHH-HcCC
Confidence 3689999999999999999986 4654
No 248
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.43 E-value=4.6 Score=31.11 Aligned_cols=27 Identities=15% Similarity=0.146 Sum_probs=22.9
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....|..|+. -|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2ep3_A 12 PYRCAECGKAFTDRSNLFTHQK-IHTGE 38 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHT-TTTTS
T ss_pred CeECCCCCchhCCHHHHHHHHH-HcCCC
Confidence 4789999999999999999986 46543
No 249
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.32 E-value=4.6 Score=30.87 Aligned_cols=26 Identities=27% Similarity=0.312 Sum_probs=22.2
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|+.|++.|.....+..|+.. |.+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~ 37 (44)
T 2eou_A 12 TSECQECGKIFRHSSLLIEHQAL-HAG 37 (44)
T ss_dssp CCCCTTTCCCCSSHHHHHHHHHH-HTT
T ss_pred CeECCCCCcccCCHHHHHHHHHH-HCC
Confidence 36899999999999999999874 654
No 250
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=62.77 E-value=2.1 Score=29.39 Aligned_cols=24 Identities=21% Similarity=0.444 Sum_probs=20.4
Q ss_pred eecCccccccCChHHHHHHhHhhhc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHW 354 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~ 354 (1267)
..|+.|++.|.....+..|+. -|.
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~-~H~ 26 (29)
T 2lvt_A 3 CQCVMCGKAFTQASSLIAHVR-QHT 26 (29)
Confidence 479999999999999999986 343
No 251
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=58.02 E-value=5.9 Score=30.55 Aligned_cols=25 Identities=20% Similarity=0.246 Sum_probs=21.9
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|+.|++.|.....+..|+.. |.+
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~~-H~~ 37 (46)
T 2el6_A 13 YKCSQCEKSFSGKLRLLVHQRM-HTR 37 (46)
T ss_dssp EECSSSSCEESSHHHHHHHHGG-GCC
T ss_pred eECCCCCcccCCHHHHHHHHHH-cCC
Confidence 6899999999999999999764 654
No 252
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.98 E-value=5.1 Score=30.82 Aligned_cols=27 Identities=19% Similarity=0.267 Sum_probs=23.0
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....|..|+. -|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2ep2_A 12 PYECSICGKSFTKKSQLHVHQQ-IHTGE 38 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-TTSSC
T ss_pred CcCCCCCCcccCCHHHHHHHHH-HhCCC
Confidence 4689999999999999999987 56553
No 253
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.96 E-value=5 Score=30.88 Aligned_cols=27 Identities=30% Similarity=0.351 Sum_probs=22.9
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. -|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2eml_A 12 PYECSVCGKAFSHRQSLSVHQR-IHSGK 38 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHG-GGSSC
T ss_pred CeeCCCcCCccCCHHHHHHHHH-HhcCC
Confidence 4689999999999999999987 46553
No 254
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=57.93 E-value=4.9 Score=36.76 Aligned_cols=28 Identities=14% Similarity=0.220 Sum_probs=23.4
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-..|+.|++.|.....|..|+..-|.++
T Consensus 56 ~~~C~~C~k~F~~~~~L~~H~~~~H~~E 83 (85)
T 2lv2_A 56 VFPCKYCPATFYSSPGLTRHINKCHPSE 83 (85)
T ss_dssp SEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred ccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence 3679999999999999999998888653
No 255
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.75 E-value=7 Score=29.90 Aligned_cols=27 Identities=26% Similarity=0.164 Sum_probs=22.9
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
=..|..|++.|.....+..|+. -|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~ 38 (44)
T 2epv_A 12 PYECNECGKAFIWKSLLIVHER-THAGV 38 (44)
T ss_dssp SEECSSSCCEESSHHHHHHHHG-GGSSC
T ss_pred CeECCCCCcccCchHHHHHHHh-HhcCC
Confidence 3579999999999999999987 46654
No 256
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.67 E-value=5.1 Score=30.77 Aligned_cols=26 Identities=15% Similarity=0.189 Sum_probs=22.4
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+.|+.|++.|.....+..|+. -|.+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2eov_A 13 YKCSDCGKSFTWKSRLRIHQK-CHTGE 38 (46)
T ss_dssp CBCSSSCCBCSSHHHHHHHHH-HHSCC
T ss_pred ccCCccChhhCCHHHHHHHHH-hcCCC
Confidence 679999999999999999986 56553
No 257
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.66 E-value=5.2 Score=30.77 Aligned_cols=27 Identities=19% Similarity=0.114 Sum_probs=23.0
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....|..|+. -|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2ytj_A 12 PYICAECGKAFTIRSNLIKHQK-IHTKQ 38 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-HTSCC
T ss_pred CeECCCCChhhCCHHHHHHHHH-HcCCC
Confidence 4689999999999999999986 46553
No 258
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.66 E-value=4.8 Score=31.07 Aligned_cols=27 Identities=22% Similarity=0.267 Sum_probs=22.8
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
=+.|+.|++.|.....|..|+. -|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2ytp_A 12 HYECSECGKAFARKSTLIMHQR-IHTGE 38 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHT-TTSCC
T ss_pred CeECCcCCcccCCHHHHHHHHH-HhCCC
Confidence 3689999999999999999987 46553
No 259
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=57.60 E-value=5.4 Score=32.42 Aligned_cols=25 Identities=32% Similarity=0.612 Sum_probs=22.1
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|+.|++.|.....+..|+.. |.+
T Consensus 3 ~~C~~C~~~f~~~~~l~~H~~~-h~~ 27 (60)
T 2adr_A 3 FVCEVCTRAFARQEHLKRHYRS-HTN 27 (60)
T ss_dssp BCCTTTCCCBSCHHHHHHHHHT-TTS
T ss_pred CcCCCCccccCCHHHHHHHHHH-hCC
Confidence 5799999999999999999975 654
No 260
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.41 E-value=4.1 Score=31.39 Aligned_cols=27 Identities=15% Similarity=0.153 Sum_probs=22.6
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. -|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2yti_A 12 PYKCNECGKVFTQNSHLARHRG-IHTGE 38 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHT-TTSCS
T ss_pred CeECCCCCcccCChhHHHHHhH-hcCCC
Confidence 3689999999999999999986 46553
No 261
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.37 E-value=4.5 Score=31.35 Aligned_cols=27 Identities=19% Similarity=0.244 Sum_probs=22.7
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....|..|+. -|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2eon_A 12 PYKCQVCGKAFRVSSHLVQHHS-VHSGE 38 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHTT-TTTSC
T ss_pred ccCCCCCCcccCcHHHHHHHHH-hcCCC
Confidence 3679999999999999999986 46553
No 262
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.34 E-value=5 Score=30.97 Aligned_cols=27 Identities=19% Similarity=0.252 Sum_probs=22.7
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. -|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2yth_A 12 PFQCEECGKRFTQNSHLHSHQR-VHTGE 38 (46)
T ss_dssp SBCCSSSCCCBSSHHHHHHHGG-GGTTC
T ss_pred CCCCCCCCcccCCHHHHHHHHH-hcCCC
Confidence 3689999999999999999986 46553
No 263
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.24 E-value=5.3 Score=30.76 Aligned_cols=27 Identities=22% Similarity=0.228 Sum_probs=22.9
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....|..|+. -|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2emh_A 12 PYICTVCGKAFTDRSNLIKHQK-IHTGE 38 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHH-HHHCS
T ss_pred CcCCCCCCchhCCHHHHHHHHH-hcCCC
Confidence 3689999999999999999986 56553
No 264
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=57.22 E-value=5.3 Score=32.01 Aligned_cols=25 Identities=20% Similarity=0.236 Sum_probs=21.0
Q ss_pred eeecCccccccCChHHHHHHhHhhh
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSH 353 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH 353 (1267)
-+.|+.|++.|.....+..|+..-|
T Consensus 29 ~~~C~~C~~~f~~~~~l~~H~~~h~ 53 (57)
T 1bbo_A 29 PYHCTYCNFSFKTKGNLTKHMKSKA 53 (57)
T ss_dssp CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred CccCCCCCchhcCHHHHHHHHHHhc
Confidence 3789999999999999999987443
No 265
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.21 E-value=5.3 Score=30.52 Aligned_cols=25 Identities=12% Similarity=0.157 Sum_probs=21.9
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|+.|++.|.....+..|+.. |.+
T Consensus 11 ~~C~~C~k~f~~~~~L~~H~~~-H~~ 35 (43)
T 2yrm_A 11 FFCNECDCRFSEEASLKRHTLQ-THS 35 (43)
T ss_dssp BCCSSSCCCBSSHHHHHHHHHH-HTC
T ss_pred EECCCCCCeeCChHHHHHHHHh-hCC
Confidence 6899999999999999999874 654
No 266
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.16 E-value=5 Score=30.59 Aligned_cols=25 Identities=20% Similarity=0.297 Sum_probs=21.9
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|+.|++.|.....+..|+.. |.+
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~~-H~~ 37 (44)
T 2yu5_A 13 FKCSKCDRVFTQRNYLVQHERT-HAR 37 (44)
T ss_dssp EECSSSSCEESSSHHHHHHHHH-CCC
T ss_pred eECCCCCchhCCHHHHHHHhHh-cCC
Confidence 6799999999999999999874 654
No 267
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.06 E-value=5.4 Score=30.76 Aligned_cols=26 Identities=19% Similarity=0.290 Sum_probs=22.2
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+.|+.|++.|.....+..|+.. |.+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~~-H~~~ 38 (46)
T 2em2_A 13 FKCKECGKAFRQNIHLASHLRI-HTGE 38 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHHH-HCCC
T ss_pred EECCcCCchhCCHHHHHHHHHH-hCCC
Confidence 6799999999999999999874 6543
No 268
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.04 E-value=4.6 Score=30.46 Aligned_cols=25 Identities=24% Similarity=0.441 Sum_probs=21.8
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|+.|++.|.....+..|+. -|.+
T Consensus 12 ~~C~~C~k~f~~~~~L~~H~~-~H~~ 36 (42)
T 2eos_A 12 YPCEICGTRFRHLQTLKSHLR-IHTG 36 (42)
T ss_dssp BCCSSSCCCBSSHHHHHHHTT-TTSC
T ss_pred EECCCCCCccCCHHHHHHHHH-hcCC
Confidence 679999999999999999987 4654
No 269
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.70 E-value=4.6 Score=30.63 Aligned_cols=27 Identities=19% Similarity=0.192 Sum_probs=22.7
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. -|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (44)
T 2en7_A 12 PYVCNECGKAFRSKSYLIIHTR-THTGE 38 (44)
T ss_dssp SSCCTTTCCCCSSHHHHHHHHT-TTCCS
T ss_pred CeECCCCCCccCCHHHHHHHhh-hcCCC
Confidence 3679999999999999999986 46543
No 270
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.66 E-value=5.8 Score=30.52 Aligned_cols=27 Identities=15% Similarity=0.198 Sum_probs=22.7
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. -|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2eoq_A 12 PFKCDICGKSFCGRSRLNRHSM-VHTAE 38 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHH-HTTCC
T ss_pred CcCCCcCCchhCCHHHHHHHHH-HcCCC
Confidence 3679999999999999999987 46553
No 271
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.47 E-value=4.4 Score=30.81 Aligned_cols=26 Identities=19% Similarity=0.286 Sum_probs=22.3
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|+.|++.|.....+..|+. -|.+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~ 37 (44)
T 2eoj_A 12 PYECCECGKVFSRKDQLVSHQK-THSG 37 (44)
T ss_dssp SCEETTTTEECSSHHHHHHHHT-TSSS
T ss_pred CeeCCCCCCccCCHHHHHHHHH-HcCC
Confidence 3689999999999999999986 4654
No 272
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.34 E-value=5.2 Score=30.86 Aligned_cols=27 Identities=22% Similarity=0.384 Sum_probs=22.7
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. -|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2em6_A 12 CYKCDVCGKEFSQSSHLQTHQR-VHTGE 38 (46)
T ss_dssp CCBCSSSCCBCSSHHHHHHHHT-TTSSS
T ss_pred CeECCCCCcccCCHHHHHHHHH-HcCCC
Confidence 3689999999999999999976 56553
No 273
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=56.31 E-value=5.4 Score=36.99 Aligned_cols=27 Identities=15% Similarity=0.265 Sum_probs=23.4
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+.|+.|++.|.....+..|+...|.+.
T Consensus 95 ~~C~~C~~~f~~~~~l~~H~~~~H~~~ 121 (124)
T 2dlq_A 95 YKCSSCSQQFMQKKDLQSHMIKLHSGP 121 (124)
T ss_dssp EECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred ccCCCccchhCCHHHHHHHHHHHCCCC
Confidence 679999999999999999998888764
No 274
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.15 E-value=5.3 Score=30.90 Aligned_cols=26 Identities=19% Similarity=0.180 Sum_probs=22.3
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+.|+.|++.|.....|..|+. -|.+.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2eom_A 13 HRCSDCGKFFLQASNFIQHRR-IHTGE 38 (46)
T ss_dssp CCCSSSCCCCSSHHHHHHHHH-HHSSC
T ss_pred cCCCCCCCeeCChHHHHHHHH-HhCCC
Confidence 579999999999999999987 46553
No 275
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=55.92 E-value=18 Score=33.11 Aligned_cols=99 Identities=10% Similarity=-0.017 Sum_probs=56.5
Q ss_pred HHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCC------chhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCC
Q 037237 49 INNEGLRALSAFQSGDSKKALEMIKESISSHQDS------PHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFP 122 (1267)
Q Consensus 49 i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s------~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p 122 (1267)
...-...|.-.+..|++.+|++..+..+...+.. +.++..-|.++..+ .+. +.-..+ +.+|+.+++
T Consensus 49 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~-~~A~~~---~~~a~~~~~ 120 (164)
T 3ro3_A 49 RIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLL----QDY-EKAIDY---HLKHLAIAQ 120 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT----TCH-HHHHHH---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH----hhH-HHHHHH---HHHHHHHHH
Confidence 3455667888889999999999999988654321 33344444444332 232 222233 233444432
Q ss_pred c---h---hhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccC
Q 037237 123 N---L---VELSFLHAALLYKLAEINDKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 123 ~---s---~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~ 160 (1267)
. . .......|..++.++ .|++|+.-.++|+.+.
T Consensus 121 ~~~~~~~~~~~~~~la~~~~~~g-----~~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 121 ELKDRIGEGRACWSLGNAYTALG-----NHDQAMHFAEKHLEIS 159 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHT-----CHHHHHHHHHHHHHHH
T ss_pred HccchHhHHHHHHHHHHHHHHcc-----CHHHHHHHHHHHHHHH
Confidence 2 1 122223444444444 4799999999988774
No 276
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=55.87 E-value=5.8 Score=30.60 Aligned_cols=26 Identities=23% Similarity=0.322 Sum_probs=22.5
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+.|+.|++.|.....+..|+. -|.+.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2emk_A 13 YECKECGKAFSQTTHLIQHQR-VHTGE 38 (46)
T ss_dssp CBCSSSCCBCSCHHHHHHHHH-HHSSC
T ss_pred eECCCCCchhCCHHHHHHHHH-HcCCC
Confidence 679999999999999999997 46553
No 277
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=55.76 E-value=6.3 Score=33.25 Aligned_cols=28 Identities=18% Similarity=0.226 Sum_probs=23.7
Q ss_pred eeeecCccccccCChHHHHHHhHhhhccc
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+-+.|+.|++.|.....+..|+.. |.+.
T Consensus 8 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~~ 35 (70)
T 1x5w_A 8 HPEKCSECSYSCSSKAALRIHERI-HCTD 35 (70)
T ss_dssp CSEECSSSSCEESSHHHHHHHHGG-GCCS
T ss_pred CCeECCCCCcccCCHHHHHHHHHH-cCCC
Confidence 347899999999999999999975 6543
No 278
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=55.72 E-value=6.1 Score=31.65 Aligned_cols=25 Identities=28% Similarity=0.523 Sum_probs=21.9
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|+.|++.|.....+..|+.. |.+
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~-h~~ 26 (57)
T 1bbo_A 2 YICEECGIRXKKPSMLKKHIRT-HTD 26 (57)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHH-TSS
T ss_pred CcCCCCcCcCCCHHHHHHHHHh-cCC
Confidence 5799999999999999999975 654
No 279
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.62 E-value=5 Score=30.98 Aligned_cols=26 Identities=27% Similarity=0.359 Sum_probs=22.3
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|+.|++.|.....|..|+. -|.+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~ 37 (46)
T 2enh_A 12 PYECDVCRKAFSHHASLTQHQR-VHSG 37 (46)
T ss_dssp SCBCTTTCCBCSSSHHHHHHGG-GSCC
T ss_pred CcCCCCcCchhCCHHHHHHHHH-HhCC
Confidence 3679999999999999999987 4654
No 280
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.60 E-value=5.4 Score=30.68 Aligned_cols=26 Identities=27% Similarity=0.262 Sum_probs=22.2
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+.|+.|++.|.....|..|+. -|.+.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2en3_A 13 FQCKECGMNFSWSCSLFKHLR-SHERT 38 (46)
T ss_dssp EECSSSCCEESSSHHHHHHHH-HHHHS
T ss_pred eeCcccChhhCCHHHHHHHHH-HhCCC
Confidence 679999999999999999986 46543
No 281
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.55 E-value=5 Score=30.84 Aligned_cols=26 Identities=23% Similarity=0.192 Sum_probs=22.2
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|+.|++.|.....+..|+. -|.+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~ 37 (45)
T 2epu_A 12 PFECTHCGKSFRAKGNLVTHQR-IHTG 37 (45)
T ss_dssp SEEETTTTEEESSHHHHHHHHT-TTSS
T ss_pred CccCCCCCCccCChHHHHHHHH-HhCC
Confidence 3689999999999999999986 4654
No 282
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=55.48 E-value=5.6 Score=31.86 Aligned_cols=25 Identities=24% Similarity=0.398 Sum_probs=22.1
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|+.|++.|.....+..|+.. |.+
T Consensus 5 ~~C~~C~~~f~~~~~l~~H~~~-h~~ 29 (57)
T 3uk3_C 5 RECSYCGKFFRSNYYLNIHLRT-HTG 29 (57)
T ss_dssp CBCTTTCCBCSCHHHHHHHHHH-HHC
T ss_pred ccCCCCcchhCChHHHHHHHHH-cCC
Confidence 6899999999999999999984 654
No 283
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.46 E-value=6 Score=30.43 Aligned_cols=27 Identities=19% Similarity=0.282 Sum_probs=22.9
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. -|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2ytk_A 12 PYKCNECGKVFTQNSHLTNHWR-IHTGE 38 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-HHSSS
T ss_pred CEeCCcCCCccCCHHHHHHHHH-HHCCC
Confidence 3689999999999999999987 46543
No 284
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.40 E-value=5 Score=30.90 Aligned_cols=26 Identities=15% Similarity=0.156 Sum_probs=22.4
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+.|+.|++.|.....|..|+. -|.+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2eq1_A 13 YKCNECGKAFRAHSNLTTHQV-IHTGE 38 (46)
T ss_dssp CCCTTTTCCCSSHHHHHHHHT-TTCCS
T ss_pred eECCcCChhhCCHHHHHHHHH-HhCCC
Confidence 689999999999999999987 46543
No 285
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.40 E-value=5.5 Score=30.63 Aligned_cols=27 Identities=15% Similarity=0.153 Sum_probs=22.7
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. -|.+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2ytn_A 12 PYKCNECGKVFTQNSHLARHRG-IHTGE 38 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHGG-GTSCC
T ss_pred CeECCCCCCeeCCHHHHHHHhh-hcCCC
Confidence 4689999999999999999986 46553
No 286
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.31 E-value=5.9 Score=30.16 Aligned_cols=26 Identities=19% Similarity=0.254 Sum_probs=22.4
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|+.|++.|.....+..|+. -|.+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~ 37 (44)
T 2emb_A 12 RYECSKCQATFNLRKHLIQHQK-THAA 37 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHGG-GGCC
T ss_pred CeECCCCCCccCCHHHHHHHHH-HcCC
Confidence 3689999999999999999986 4654
No 287
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.23 E-value=5.6 Score=30.67 Aligned_cols=26 Identities=23% Similarity=0.385 Sum_probs=22.2
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+.|+.|++.|.....|..|+. -|.+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2emz_A 13 FKCNECGKGFGRRSHLAGHLR-LHSRE 38 (46)
T ss_dssp CCCSSSCCCCSSHHHHHHHHH-HHHHT
T ss_pred eECCCCCcccCCHHHHHHHHH-HhCCC
Confidence 579999999999999999987 46543
No 288
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=55.18 E-value=9.4 Score=42.30 Aligned_cols=98 Identities=10% Similarity=0.052 Sum_probs=64.1
Q ss_pred HHHhHhhcCCHHHHHHHHHHHHhhC---CC---CchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhH
Q 037237 55 RALSAFQSGDSKKALEMIKESISSH---QD---SPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELS 128 (1267)
Q Consensus 55 ~a~~~~~~Gnh~kAL~~~kd~~~~h---~~---s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a 128 (1267)
+|.-.+..|++.+|++..+..+... ++ .+.++..-|.+++.+. +. +.- +..+.+|..++++.....
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~----~~-~~A---~~~~~~al~~~~~~~~~~ 180 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMK----QT-YFS---MDYARQAYEIYKEHEAYN 180 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHHHTCSTTH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcC----CH-HHH---HHHHHHHHHHHHhCccch
Confidence 7888899999999999999998542 22 3455555666655532 33 222 333555777776655444
Q ss_pred HHHHHHHHHHHhhhc--hhHHHHHHHHHHHhccC
Q 037237 129 FLHAALLYKLAEIND--KEWDVVIEACERMLKIG 160 (1267)
Q Consensus 129 ~f~A~lL~~la~~~~--~~Y~~a~~ec~RaL~i~ 160 (1267)
...|..++.+|.-.. ..|++|+.-.++||.+.
T Consensus 181 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 214 (383)
T 3ulq_A 181 IRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMA 214 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 445555555554331 26899999999999883
No 289
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.17 E-value=6.1 Score=30.47 Aligned_cols=26 Identities=27% Similarity=0.325 Sum_probs=22.3
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
..|+.|++.|.....|..|+. -|.+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2em4_A 13 YECIECGKAFKTKSSLICHRR-SHTGE 38 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH-HHSSS
T ss_pred cCCCCCCCccCCHHHHHHHHH-hcCCC
Confidence 579999999999999999987 46543
No 290
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=55.14 E-value=19 Score=32.46 Aligned_cols=66 Identities=5% Similarity=-0.142 Sum_probs=49.1
Q ss_pred HHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchh
Q 037237 52 EGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLV 125 (1267)
Q Consensus 52 e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~ 125 (1267)
-...|.-+++.|++.+|++..+.++...|..+.++..-|.++..+. +. +-- +..+.+|+.+.|+..
T Consensus 22 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g----~~-~~A---~~~~~~al~~~~~~~ 87 (115)
T 2kat_A 22 RFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQG----DR-AGA---RQAWESGLAAAQSRG 87 (115)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT----CH-HHH---HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcC----CH-HHH---HHHHHHHHHhccccc
Confidence 3456667789999999999999999999998888888888887764 22 111 333556777777543
No 291
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.87 E-value=6.3 Score=30.29 Aligned_cols=27 Identities=15% Similarity=0.044 Sum_probs=22.8
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. -|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2emp_A 12 PYMCNECGKAFSVYSSLTTHQV-IHTGE 38 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHHH-HHHCC
T ss_pred CeECCCCCchhCCHHHHHHHHH-HcCCC
Confidence 3689999999999999999987 46553
No 292
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.87 E-value=5.4 Score=30.69 Aligned_cols=25 Identities=20% Similarity=0.324 Sum_probs=21.8
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|+.|++.|.....+..|+. -|.+
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~-~H~~ 37 (46)
T 2epz_A 13 FDCIDCGKAFSDHIGLNQHRR-IHTG 37 (46)
T ss_dssp BCCTTTCCCBSSHHHHHHHHT-TTTT
T ss_pred eECCCCCceeCCHHHHHHHHH-HhCC
Confidence 679999999999999999987 4654
No 293
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.85 E-value=4.8 Score=30.93 Aligned_cols=26 Identities=19% Similarity=0.164 Sum_probs=22.2
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|+.|++.|.....|..|+. -|.+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~ 37 (46)
T 2eq3_A 12 PYECNQCGKAFSVRSSLTTHQA-IHTG 37 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHT-TSCC
T ss_pred CeECCCCChhhCCHHHHHHHHH-HhCC
Confidence 3679999999999999999986 4654
No 294
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.58 E-value=6.3 Score=30.38 Aligned_cols=25 Identities=20% Similarity=0.231 Sum_probs=22.1
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|+.|++.|.....+..|+.. |.+
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~~-H~~ 37 (46)
T 2em8_A 13 YKCVECGKGYKRRLDLDFHQRV-HTG 37 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHHH-HHC
T ss_pred eECcccCchhCCHHHHHHHHHH-HcC
Confidence 6899999999999999999974 654
No 295
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=54.58 E-value=5.3 Score=30.86 Aligned_cols=20 Identities=25% Similarity=0.433 Sum_probs=18.9
Q ss_pred eecCccccccCChHHHHHHh
Q 037237 330 SECFVCVEKIGNPQLCEKHF 349 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~ 349 (1267)
..|+.|++.|.....|..|+
T Consensus 9 ~~C~~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 9 FMCLPCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp CEETTTTEECSCHHHHHHHH
T ss_pred eECCCCCCccCCHhHccCcC
Confidence 57999999999999999998
No 296
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.54 E-value=6 Score=30.33 Aligned_cols=26 Identities=23% Similarity=0.286 Sum_probs=22.3
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+.|+.|++.|.....|..|+. -|.+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2eq4_A 13 YNCKECGKSFSRAPCLLKHER-LHSGE 38 (46)
T ss_dssp CCBTTTTBCCSCHHHHHHHHH-HCCSS
T ss_pred eECCCCCCccCchHHHHHHHH-hcCCC
Confidence 679999999999999999986 46543
No 297
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.47 E-value=4.4 Score=30.88 Aligned_cols=26 Identities=15% Similarity=0.169 Sum_probs=22.3
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|+.|++.|.....+..|+. -|.+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~ 37 (44)
T 2eox_A 12 SYNCNECGKAFTRIFHLTRHQK-IHTR 37 (44)
T ss_dssp CEEETTTTEEESSSHHHHTTHH-HHCC
T ss_pred CeECcccCcccCCHHHHHHHHH-HhCC
Confidence 4689999999999999999987 4654
No 298
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.36 E-value=5.9 Score=30.48 Aligned_cols=27 Identities=22% Similarity=0.225 Sum_probs=22.8
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. -|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2ep0_A 12 PYKCDVCHKSFRYGSSLTVHQR-IHTGE 38 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHT-TTSSS
T ss_pred CeeCcccCcccCChHHHHHHHH-HhCCC
Confidence 4789999999999999999986 46543
No 299
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.32 E-value=5.6 Score=30.77 Aligned_cols=27 Identities=26% Similarity=0.565 Sum_probs=22.8
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+.. |.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~ 38 (46)
T 2ytm_A 12 PYKCMECGKAFGDNSSCTQHQRL-HTGQ 38 (46)
T ss_dssp SSSBTTTTBCCSSHHHHHHHHHH-HHSC
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-cCCC
Confidence 36799999999999999999974 6553
No 300
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=54.19 E-value=31 Score=34.97 Aligned_cols=51 Identities=8% Similarity=-0.058 Sum_probs=37.5
Q ss_pred hhHHHHHHHHHhHhhcCCHHHHHHHHHHHHhh--------CCCCchhhhhhhHHHHHHH
Q 037237 47 PEINNEGLRALSAFQSGDSKKALEMIKESISS--------HQDSPHLHCLEAFIHHSLA 97 (1267)
Q Consensus 47 ~~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~--------h~~s~~~h~~qg~v~~~lA 97 (1267)
..+..-...|.-.+..|++.+|++.+++.+.. +|..+.++..-|.++..+.
T Consensus 125 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g 183 (283)
T 3edt_B 125 DVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQG 183 (283)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcC
Confidence 44555667777888999999999999999877 4445566666677766543
No 301
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.01 E-value=6.5 Score=30.21 Aligned_cols=28 Identities=21% Similarity=0.221 Sum_probs=23.4
Q ss_pred eeeecCccccccCChHHHHHHhHhhhccc
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+-+.|+.|++.|.....+..|+. -|.+.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2ytd_A 11 KPYKCSECGKAFHRHTHLNEHRR-IHTGY 38 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHH-HHTCC
T ss_pred cCeECCCCCCeeCChHHHHHHHH-HcCCC
Confidence 34789999999999999999976 46553
No 302
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.93 E-value=6.6 Score=30.19 Aligned_cols=27 Identities=26% Similarity=0.329 Sum_probs=22.8
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
=+.|+.|++.|.....+..|+. -|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2enc_A 12 PFKCEECGKGFYTNSQCYSHQR-SHSGE 38 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-HSCCS
T ss_pred CcCCCCCCCcCCChHHHHHHHH-HhCCC
Confidence 3689999999999999999986 46543
No 303
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=53.79 E-value=7.2 Score=27.30 Aligned_cols=24 Identities=21% Similarity=0.211 Sum_probs=20.6
Q ss_pred eecC--ccccccCChHHHHHHhHhhhc
Q 037237 330 SECF--VCVEKIGNPQLCEKHFRSSHW 354 (1267)
Q Consensus 330 W~C~--~C~~kF~d~~~~~~H~~~eH~ 354 (1267)
+.|. .|++.|.....+..|+.. |.
T Consensus 4 ~~C~~~~C~k~f~~~~~L~~H~~~-H~ 29 (32)
T 1zfd_A 4 YSCDHPGCDKAFVRNHDLIRHKKS-HQ 29 (32)
T ss_dssp BCCCCTTCCCCBSSSHHHHHHHGG-GT
T ss_pred CcCcCCCCCCccCCHHHHHHHHHH-cc
Confidence 5798 899999999999999874 54
No 304
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.63 E-value=6.3 Score=30.39 Aligned_cols=25 Identities=20% Similarity=0.256 Sum_probs=21.9
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|+.|++.|.....+..|+. -|.+
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~-~H~~ 37 (46)
T 2elz_A 13 YKCEDCGKGYNRRLNLDMHQR-VHMG 37 (46)
T ss_dssp CBCSSSCCBCSSHHHHHHHGG-GGGS
T ss_pred eeCcccCchhCCHHHHHHHHH-hcCC
Confidence 689999999999999999987 4654
No 305
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.58 E-value=5.9 Score=30.49 Aligned_cols=27 Identities=19% Similarity=0.250 Sum_probs=22.7
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. -|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2en1_A 12 PFKCEECGKRFTQNSQLHSHQR-VHTGE 38 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHGG-GGSCC
T ss_pred CeeCCCCCcccCCHHHHHHHHH-HcCCC
Confidence 3689999999999999999986 46543
No 306
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=53.56 E-value=21 Score=43.32 Aligned_cols=96 Identities=16% Similarity=0.111 Sum_probs=60.9
Q ss_pred CHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHHHHHHHHhh--
Q 037237 64 DSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAALLYKLAEI-- 141 (1267)
Q Consensus 64 nh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~-- 141 (1267)
+..+||+..+.++..+|....+..-.|.+..++....+.. ++.+.++++..|+....-+..+.+|..+...
T Consensus 124 ~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~e-------l~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~~ 196 (567)
T 1dce_A 124 NWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEE-------LAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPD 196 (567)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHH-------HHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCC
T ss_pred cHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHH-------HHHHHHHHHHCCCCccHHHHHHHHHHhhccccc
Confidence 3455555555555555544444444444444432110011 5567789999999999889999999887321
Q ss_pred ------h-chhHHHHHHHHHHHhccCCCCCccc
Q 037237 142 ------N-DKEWDVVIEACERMLKIGDPYDTLL 167 (1267)
Q Consensus 142 ------~-~~~Y~~a~~ec~RaL~i~~P~dp~~ 167 (1267)
+ ...|+++++-+.+|+.+ +|.|+..
T Consensus 197 ~~~~~~~~~~~~~eel~~~~~ai~~-~P~~~sa 228 (567)
T 1dce_A 197 SGPQGRLPENVLLKELELVQNAFFT-DPNDQSA 228 (567)
T ss_dssp SSSCCSSCHHHHHHHHHHHHHHHHH-CSSCSHH
T ss_pred ccccccccHHHHHHHHHHHHHHHhh-CCCCccH
Confidence 0 14699999999999988 5776444
No 307
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=53.51 E-value=16 Score=39.03 Aligned_cols=29 Identities=17% Similarity=0.091 Sum_probs=19.1
Q ss_pred HHHHHHHHhhh---chhHHHHHHHHHHHhccC
Q 037237 132 AALLYKLAEIN---DKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 132 A~lL~~la~~~---~~~Y~~a~~ec~RaL~i~ 160 (1267)
|.+++.+|.-. +..|++|+.-.++||.+.
T Consensus 236 ~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 236 GQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 44555555322 335899999999999874
No 308
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.47 E-value=6.1 Score=30.31 Aligned_cols=27 Identities=19% Similarity=0.198 Sum_probs=22.6
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. -|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2en8_A 12 SHTCDECGKNFCYISALRIHQR-VHMGE 38 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHT-TTCCS
T ss_pred CeECCCcCcccCCHHHHHHHHH-HhCCC
Confidence 3679999999999999999985 56543
No 309
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.45 E-value=5.1 Score=30.75 Aligned_cols=26 Identities=19% Similarity=0.334 Sum_probs=22.2
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+.|+.|++.|.....+..|+. -|.+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2ytr_A 13 YKCNECGKAFSQTSKLARHQR-IHTGE 38 (46)
T ss_dssp TCCTTTCCCCSSHHHHHHHHT-TTTTC
T ss_pred cCCCCCCCccCCHHHHHHHHH-hcCCC
Confidence 679999999999999999986 46543
No 310
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.17 E-value=6.4 Score=30.36 Aligned_cols=25 Identities=24% Similarity=0.278 Sum_probs=21.7
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
..|+.|++.|.....|..|+. -|.+
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~-~H~~ 37 (46)
T 2eoh_A 13 YECKECRKTFIQIGHLNQHKR-VHTG 37 (46)
T ss_dssp CCCSSSCCCCSSHHHHHHHHH-HCSS
T ss_pred cCCCCcCchhCCHHHHHHHHH-HhCC
Confidence 579999999999999999987 4654
No 311
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=53.07 E-value=6.6 Score=31.62 Aligned_cols=27 Identities=15% Similarity=0.315 Sum_probs=22.8
Q ss_pred eeeecCccccccCChHHHHHHhHhhhcc
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+-+.|+.|++.|.....+..|+. -|.+
T Consensus 23 k~~~C~~C~k~f~~~~~L~~H~~-~H~~ 49 (54)
T 1yui_A 23 QPATCPICYAVIRQSRNLRRHLE-LRHF 49 (54)
T ss_dssp CCEECTTTCCEESSHHHHHHHHH-HHTT
T ss_pred CCccCCCCCcccCCHHHHHHHHH-Hhcc
Confidence 34689999999999999999987 4654
No 312
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.95 E-value=6.8 Score=30.10 Aligned_cols=25 Identities=20% Similarity=0.123 Sum_probs=21.9
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|+.|++.|.....+..|+.. |.+
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~~-H~~ 37 (46)
T 2yso_A 13 HQCRECGEIFFQYVSLIEHQVL-HMG 37 (46)
T ss_dssp EECTTTCCEESSHHHHHHHHHH-HSC
T ss_pred EEccccChhhCCHHHHHHHHHH-hCC
Confidence 6799999999999999999874 654
No 313
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=52.93 E-value=11 Score=32.55 Aligned_cols=67 Identities=12% Similarity=0.256 Sum_probs=49.2
Q ss_pred CCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 80 QDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 80 ~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
|+.+.++...|.+++... +. +-- +..+.+|+.+.|+....-...|.+++.+++ |++|+...++++.+
T Consensus 3 p~~~~~~~~~~~~~~~~~----~~-~~A---~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~-----~~~A~~~~~~a~~~ 69 (112)
T 2kck_A 3 DQNPEEYYLEGVLQYDAG----NY-TES---IDLFEKAIQLDPEESKYWLMKGKALYNLER-----YEEAVDCYNYVINV 69 (112)
T ss_dssp CSSTTGGGGHHHHHHSSC----CH-HHH---HHHHHHHHHHCCCCHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHHhh----hH-HHH---HHHHHHHHHhCcCCHHHHHHHHHHHHHccC-----HHHHHHHHHHHHHh
Confidence 556677777777766432 21 111 444667899999998887888888888764 89999999999988
No 314
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=52.76 E-value=86 Score=33.30 Aligned_cols=101 Identities=9% Similarity=-0.002 Sum_probs=56.7
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhC---CCcchhhhhhhhhhhhhccCCchhhhHH
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAG---KGTDTQLEHLTTAASAVGRFPNLVELSF 129 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~---~~~~~k~~~l~~~~~Av~l~p~s~~~a~ 129 (1267)
.+++..++..|++.+|++.+++.+...+..... ......++.++.... +. +-- +.-+.+|....+.......
T Consensus 79 ~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~A---~~~~~~al~~~~~~~~~~~ 153 (293)
T 2qfc_A 79 KDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEF-QQFLQWQYYVAAYVLKKVDY-EYC---ILELKKLLNQQLTGIDVYQ 153 (293)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHH-HHHHHHHHHHHHHHHTSSCH-HHH---HHHHHHHHTTCCCSSCTTH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHhccccCChhH-HHHHHHHHHHHHHHhcCCCH-HHH---HHHHHHHHHHHhcCCchHH
Confidence 567888899999999999999998776543222 222233333443321 21 111 3344556666554422111
Q ss_pred HHHHHHHHHHhhh--chhHHHHHHHHHHHhcc
Q 037237 130 LHAALLYKLAEIN--DKEWDVVIEACERMLKI 159 (1267)
Q Consensus 130 f~A~lL~~la~~~--~~~Y~~a~~ec~RaL~i 159 (1267)
.|..++.+|.-. ...|++|+.-.++||.+
T Consensus 154 -~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~ 184 (293)
T 2qfc_A 154 -NLYIENAIANIYAENGYLKKGIDLFEQILKQ 184 (293)
T ss_dssp -HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 222333333221 12589999999999865
No 315
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=52.69 E-value=6.9 Score=30.01 Aligned_cols=28 Identities=25% Similarity=0.222 Sum_probs=23.1
Q ss_pred eeeecCccccccCChHHHHHHhHhhhccc
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+-+.|+.|++.|.....+..|+. -|.+.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2el4_A 11 KPYGCSQCAKTFSLKSQLIVHQR-SHTGV 38 (46)
T ss_dssp CSEECSSSSCEESSHHHHHHHGG-GSSSC
T ss_pred CceECCCCCchhCCHHHHHHHHH-HhCCC
Confidence 34689999999999999999986 46543
No 316
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=52.68 E-value=15 Score=37.66 Aligned_cols=54 Identities=19% Similarity=0.164 Sum_probs=43.9
Q ss_pred hhhhhhhhccCCchhhhHHHHHHHHHHHHhhh-----chhHHHHHHHHHHHhccCCCCCc
Q 037237 111 LTTAASAVGRFPNLVELSFLHAALLYKLAEIN-----DKEWDVVIEACERMLKIGDPYDT 165 (1267)
Q Consensus 111 l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~-----~~~Y~~a~~ec~RaL~i~~P~dp 165 (1267)
+..+++|+++.|++.+.-.-++..|..++..= -+.|++|+...++||.+ +|..+
T Consensus 22 ~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l-dP~~~ 80 (158)
T 1zu2_A 22 RQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLI-DPKKD 80 (158)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-CTTCH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh-CcCcH
Confidence 66788999999999998888999999987530 02488999999999999 56654
No 317
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.56 E-value=6 Score=30.52 Aligned_cols=26 Identities=19% Similarity=0.314 Sum_probs=22.2
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-..|+.|++.|.....|..|+. -|.+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~ 37 (46)
T 2eoy_A 12 CFKCNKCEKTFSCSKYLTQHER-IHTR 37 (46)
T ss_dssp CEECSSSCCEESSSHHHHHHHT-TCCS
T ss_pred CEECcCCCCcCCCHHHHHHHHH-HcCC
Confidence 3579999999999999999986 4654
No 318
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.55 E-value=5.6 Score=30.51 Aligned_cols=28 Identities=21% Similarity=0.209 Sum_probs=23.3
Q ss_pred eeeecCccccccCChHHHHHHhHhhhccc
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+-+.|+.|++.|.....+..|+. -|.+.
T Consensus 11 ~~~~C~~C~k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2eoe_A 11 KPYKCNECGKVFTQNSHLANHQR-IHTGV 38 (46)
T ss_dssp CSSEETTTTEECSSHHHHHHHHG-GGSCC
T ss_pred CCeECCCcChhhCCHHHHHHHHH-HcCCC
Confidence 34689999999999999999986 56553
No 319
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.80 E-value=5.5 Score=30.67 Aligned_cols=27 Identities=19% Similarity=0.186 Sum_probs=22.8
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. -|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2ytg_A 12 PFKCGECGKSYNQRVHLTQHQR-VHTGE 38 (46)
T ss_dssp SEECTTTCCEESSSHHHHTTGG-GGSSC
T ss_pred CeECCCCCcccCCHHHHHHHHH-HcCCC
Confidence 4789999999999999999986 46543
No 320
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=51.61 E-value=7.1 Score=27.19 Aligned_cols=24 Identities=21% Similarity=0.397 Sum_probs=20.2
Q ss_pred eecC--ccccccCChHHHHHHhHhhhc
Q 037237 330 SECF--VCVEKIGNPQLCEKHFRSSHW 354 (1267)
Q Consensus 330 W~C~--~C~~kF~d~~~~~~H~~~eH~ 354 (1267)
..|+ .|++.|.....+..|+.. |.
T Consensus 3 ~~C~~~~C~k~f~~~~~L~~H~~~-H~ 28 (31)
T 1sp2_A 3 FMCTWSYCGKRFTRSDELQRHKRT-HT 28 (31)
T ss_dssp CBCCSTTCCCBCSSHHHHHHHHTT-TS
T ss_pred cCCcCCCCCcccCCHhHHHHHHHH-hc
Confidence 4687 899999999999999863 54
No 321
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.28 E-value=6.6 Score=30.19 Aligned_cols=27 Identities=19% Similarity=0.210 Sum_probs=22.8
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. -|.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2yu8_A 12 PYKCNECGKVFTQNSHLARHRR-VHTGG 38 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHTH-HHHSC
T ss_pred CeECCcCCchhCCHHHHHHHHH-hcCCC
Confidence 3689999999999999999986 56543
No 322
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=51.07 E-value=7.5 Score=26.18 Aligned_cols=22 Identities=14% Similarity=0.333 Sum_probs=19.6
Q ss_pred eecC--ccccccCChHHHHHHhHh
Q 037237 330 SECF--VCVEKIGNPQLCEKHFRS 351 (1267)
Q Consensus 330 W~C~--~C~~kF~d~~~~~~H~~~ 351 (1267)
..|. .|++.|.....+..|+..
T Consensus 3 ~~C~~~~C~k~f~~~~~l~~H~~~ 26 (29)
T 2ab3_A 3 YVCHFENCGRSFNDRRKLNRHKKI 26 (29)
T ss_dssp EEECSTTTCEEESSHHHHHHHHGG
T ss_pred CCCcCCcCcCccCCHHHHHHHHHH
Confidence 4789 999999999999999863
No 323
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=51.03 E-value=6.7 Score=30.66 Aligned_cols=27 Identities=22% Similarity=0.277 Sum_probs=22.7
Q ss_pred eeeecCccccccCChHHHHHHhHhhhcc
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+=+.|+.|++.|.....|..|+. -|.+
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~-~H~~ 37 (48)
T 2epr_A 11 KQVACEICGKIFRDVYHLNRHKL-SHSG 37 (48)
T ss_dssp CSEEETTTTEEESSHHHHHHHGG-GSCS
T ss_pred cCeeCCCCCcccCCHHHHHHHHH-hcCC
Confidence 34689999999999999999987 4654
No 324
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=50.69 E-value=8.3 Score=32.86 Aligned_cols=27 Identities=19% Similarity=0.385 Sum_probs=22.3
Q ss_pred eeeecCccccccCChHHHHHHhHhhhcc
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+=+.|+.|++.|.....|..|+. -|.+
T Consensus 31 kp~~C~~C~k~F~~~~~L~~H~~-~Htg 57 (60)
T 4gzn_C 31 RPRSCPECGKCFRDQSEVNRHLK-VHQN 57 (60)
T ss_dssp CCEECTTTCCEESSHHHHHHHGG-GGSC
T ss_pred cCeECCCCCCCcCCHHHHHHHhC-ccCC
Confidence 45789999999999999999986 4755
No 325
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=50.20 E-value=24 Score=40.15 Aligned_cols=134 Identities=14% Similarity=0.093 Sum_probs=85.5
Q ss_pred CHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHHHHHHHHhhh-
Q 037237 64 DSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAALLYKLAEIN- 142 (1267)
Q Consensus 64 nh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~- 142 (1267)
+..+||..+..++..+|....+..-.|.+...+..-.++. |+.+.++++..|....--+....+|..+...-
T Consensus 125 ~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~ee-------l~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~ 197 (331)
T 3dss_A 125 NWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEE-------LAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPD 197 (331)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHH-------HHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC-
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHH-------HHHHHHHHHHCCCCHHHHHHHHHHHHHhhhccc
Confidence 5778888888888888877777777777766554211111 56677799999999988889999998883210
Q ss_pred --------chhHHHHHHHHHHHhccCCCCCcccCCCcccccccchhhhhhhccCChhhhHHHHHHHHHHHHHHhhh
Q 037237 143 --------DKEWDVVIEACERMLKIGDPYDTLLGSNLVDMFTGSLLEKEKVGMSNRESKIESMKQQIMKCLQDSRS 210 (1267)
Q Consensus 143 --------~~~Y~~a~~ec~RaL~i~~P~dp~~~~~~~d~~~~~l~~~~~~~~~~~~~ri~~~k~~L~~li~~a~~ 210 (1267)
...|++++.-+.+|+.+ +|.|++.=+ |..-|.....-.......+++.+++++..+-+.-+.
T Consensus 198 ~~~~~~~~~~~~~eEle~~~~ai~~-~P~d~SaW~-----Y~r~ll~~~~~~~~~~~~~~~~l~~el~~~~elle~ 267 (331)
T 3dss_A 198 SGPQGRLPENVLLKELELVQNAFFT-DPNDQSAWF-----YHRWLLGAGSGRCELSVEKSTVLQSELESCKELQEL 267 (331)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHH-STTCHHHHH-----HHHHHHHSSSCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccchHHHHHHHHHHHHHHHh-CCCCHHHHH-----HHHHHHHhccCccccchHHHHHHHHHHHHHHHHHhh
Confidence 14699999999999998 688866510 000011000000111256777888887665544333
No 326
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=49.91 E-value=32 Score=41.12 Aligned_cols=105 Identities=8% Similarity=-0.067 Sum_probs=64.0
Q ss_pred HHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCC-CCchhhhhhhHHHHHHHHHhCCCc--chhhhh----hhhhhhhhccC
Q 037237 49 INNEGLRALSAFQSGDSKKALEMIKESISSHQ-DSPHLHCLEAFIHHSLAEKAGKGT--DTQLEH----LTTAASAVGRF 121 (1267)
Q Consensus 49 i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~-~s~~~h~~qg~v~~~lA~~~~~~~--~~k~~~----l~~~~~Av~l~ 121 (1267)
.+...++|..+-..|++.+|+.+.+++..... .-+.-|-..+.++..||....+.- +-...| |+.. -.-+=
T Consensus 309 a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~--~~~lG 386 (490)
T 3n71_A 309 SKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGY--MKLYH 386 (490)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH--HHHSC
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH--HHHcC
Confidence 34556777778889999999999999987763 234445556666666665543310 111122 2221 12344
Q ss_pred CchhhhHHHH---HHHHHHHHhhhchhHHHHHHHHHHHhccC
Q 037237 122 PNLVELSFLH---AALLYKLAEINDKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 122 p~s~~~a~f~---A~lL~~la~~~~~~Y~~a~~ec~RaL~i~ 160 (1267)
|+++..|.-+ |.+++..| .|++|+.-.+|||.|.
T Consensus 387 ~~Hp~~a~~l~nLa~~~~~~G-----~~~eA~~~~~~Al~i~ 423 (490)
T 3n71_A 387 HNNAQLGMAVMRAGLTNWHAG-----HIEVGHGMICKAYAIL 423 (490)
T ss_dssp TTCHHHHHHHHHHHHHHHHTT-----CHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHH
Confidence 6666665543 33333333 4899999999999883
No 327
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=49.40 E-value=50 Score=37.89 Aligned_cols=87 Identities=14% Similarity=0.023 Sum_probs=70.2
Q ss_pred cCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHHHHHHH-Hh
Q 037237 62 SGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAALLYKL-AE 140 (1267)
Q Consensus 62 ~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~lL~~l-a~ 140 (1267)
.+-..+||++...++..+|....+....|.+...+....++. |.....+...+|++..+-+.+..+|..+ +.
T Consensus 67 ~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eE-------L~~~~~~L~~nPKny~aW~hR~wlL~~l~~~ 139 (349)
T 3q7a_A 67 EEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDE-------LRLMNEFAVQNLKSYQVWHHRLLLLDRISPQ 139 (349)
T ss_dssp TCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHH-------HHHHHHHHHTTCCCHHHHHHHHHHHHHHCCS
T ss_pred CCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHH-------HHHHHHHHHhCCCcHHHHHHHHHHHHHhcCC
Confidence 344578999999999999999999999999887764322222 5556669999999999999999998887 42
Q ss_pred hhchhHHHHHHHHHHHhcc
Q 037237 141 INDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 141 ~~~~~Y~~a~~ec~RaL~i 159 (1267)
.|++++.-|.++|.+
T Consensus 140 ----~~~~EL~~~~k~L~~ 154 (349)
T 3q7a_A 140 ----DPVSEIEYIHGSLLP 154 (349)
T ss_dssp ----CCHHHHHHHHHHTSS
T ss_pred ----ChHHHHHHHHHHHHh
Confidence 378999999999987
No 328
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=49.38 E-value=7.5 Score=33.68 Aligned_cols=24 Identities=17% Similarity=0.195 Sum_probs=22.0
Q ss_pred ccccccCChHHHHHHhHhhhcccC
Q 037237 334 VCVEKIGNPQLCEKHFRSSHWNHL 357 (1267)
Q Consensus 334 ~C~~kF~d~~~~~~H~~~eH~~~l 357 (1267)
-|++.|.+.+.|..||..+|++.-
T Consensus 8 ~C~~~f~~~~~l~~Hv~~~Hv~~~ 31 (64)
T 1zw8_A 8 ECPESASSLFDLQRHLLKDHVSQD 31 (64)
T ss_dssp TCCCCCSSHHHHHHHHHHHSCCCC
T ss_pred CCCCcCCCHHHHHHHHHhhccCcc
Confidence 399999999999999999999864
No 329
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=49.10 E-value=51 Score=35.29 Aligned_cols=102 Identities=11% Similarity=0.013 Sum_probs=53.5
Q ss_pred HHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHH---hCCCcchhhhhhhhhhhhhccCCchhhhH--
Q 037237 54 LRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEK---AGKGTDTQLEHLTTAASAVGRFPNLVELS-- 128 (1267)
Q Consensus 54 ~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~---~~~~~~~k~~~l~~~~~Av~l~p~s~~~a-- 128 (1267)
..+.-.++.|++.+|++..+..+...|..+..+......++.++.. ..+. +-- +..+++|+.+.|+....-
T Consensus 163 ~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~-~~A---~~~~~~al~l~p~~~~~~~~ 238 (292)
T 1qqe_A 163 KCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDA-VAA---ARTLQEGQSEDPNFADSRES 238 (292)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCH-HHH---HHHHHGGGCC---------H
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCH-HHH---HHHHHHHHhhCCCCCCcHHH
Confidence 3455667889999999999999988877665543333333333321 2232 111 445677999999865421
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 129 FLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 129 ~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
.+...+...........|++++..-.+++.+
T Consensus 239 ~~l~~l~~~~~~~~~~~~~~A~~~~~~~~~l 269 (292)
T 1qqe_A 239 NFLKSLIDAVNEGDSEQLSEHCKEFDNFMRL 269 (292)
T ss_dssp HHHHHHHHHHHTTCTTTHHHHHHHHTTSSCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhccCCcc
Confidence 2222222222111123688888887666554
No 330
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=48.73 E-value=11 Score=32.71 Aligned_cols=26 Identities=27% Similarity=0.447 Sum_probs=17.2
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|+.|++.|.....+..|+..-|..
T Consensus 16 ~~C~~C~~~f~~~~~l~~H~~~~~~~ 41 (86)
T 1x6h_A 16 YACSHCDKTFRQKQLLDMHFKRYHDP 41 (86)
T ss_dssp EECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred CcCCCCCCccCCHHHHHHHHHHhcCC
Confidence 56777777777777777776655544
No 331
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=48.65 E-value=22 Score=38.51 Aligned_cols=98 Identities=11% Similarity=0.022 Sum_probs=54.0
Q ss_pred HHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCC------chhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCc
Q 037237 50 NNEGLRALSAFQSGDSKKALEMIKESISSHQDS------PHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPN 123 (1267)
Q Consensus 50 ~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s------~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~ 123 (1267)
..-...|.-.+..|++.+|++.+++.+...+.. +.++..-|.++..+ .+. +--..| +.+|..+++.
T Consensus 228 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~----g~~-~~A~~~---~~~a~~~~~~ 299 (406)
T 3sf4_A 228 RAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLL----QDY-EKAIDY---HLKHLAIAQE 299 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT----TCH-HHHHHH---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHh----CcH-HHHHHH---HHHHHHHHHh
Confidence 344555666777888888888888777554322 23333333333322 222 222222 3335554443
Q ss_pred h------hhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccC
Q 037237 124 L------VELSFLHAALLYKLAEINDKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 124 s------~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~ 160 (1267)
. .......|..++.+|+ |++|+.-.++|+.+.
T Consensus 300 ~~~~~~~~~~~~~la~~~~~~g~-----~~~A~~~~~~al~~~ 337 (406)
T 3sf4_A 300 LNDRIGEGRACWSLGNAYTALGN-----HDQAMHFAEKHLEIS 337 (406)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTC-----HHHHHHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHHHHHcCC-----HHHHHHHHHHHHHHH
Confidence 2 2333355555555554 899999999998884
No 332
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=48.59 E-value=7.4 Score=29.81 Aligned_cols=27 Identities=26% Similarity=0.288 Sum_probs=22.7
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
=..|+.|++.|.....+..|+.. |.+.
T Consensus 10 ~~~C~~C~k~f~~~~~l~~H~~~-H~~~ 36 (45)
T 2epq_A 10 PYSCPVCGLRFKRKDRMSYHVRS-HDGS 36 (45)
T ss_dssp SSEETTTTEECSCHHHHHHHHHH-HSCC
T ss_pred CCcCCCCCcccCCHHHHHHHHHH-ccCC
Confidence 35799999999999999999874 6553
No 333
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=48.21 E-value=20 Score=39.93 Aligned_cols=102 Identities=12% Similarity=0.080 Sum_probs=66.1
Q ss_pred hhHHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchh-
Q 037237 47 PEINNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLV- 125 (1267)
Q Consensus 47 ~~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~- 125 (1267)
..++.+. |.-....|++.+|++++..+...+|+.. ++++.|.++++.- +- +.-..++. .+....++..
T Consensus 102 ~dl~Lay--A~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~----r~-~dA~~~l~---~a~~~~d~~~~ 170 (282)
T 4f3v_A 102 LAITMGF--AACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAE----RW-TDVIDQVK---SAGKWPDKFLA 170 (282)
T ss_dssp HHHHHHH--HHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTT----CH-HHHHHHHT---TGGGCSCHHHH
T ss_pred hHHHHHH--HHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcC----CH-HHHHHHHH---HhhccCCcccH
Confidence 3444444 5556678999999999999998888777 8999998776553 32 22233343 3554433322
Q ss_pred -hhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCCcc
Q 037237 126 -ELSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYDTL 166 (1267)
Q Consensus 126 -~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~dp~ 166 (1267)
....+.+..+-.||. |++|+....+++. .|.+|.
T Consensus 171 ~~a~~~LG~al~~LG~-----~~eAl~~l~~a~~--g~~~P~ 205 (282)
T 4f3v_A 171 GAAGVAHGVAAANLAL-----FTEAERRLTEAND--SPAGEA 205 (282)
T ss_dssp HHHHHHHHHHHHHTTC-----HHHHHHHHHHHHT--STTTTT
T ss_pred HHHHHHHHHHHHHCCC-----HHHHHHHHHHHhc--CCCCcc
Confidence 233455666666664 7999999999984 354454
No 334
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=47.85 E-value=34 Score=30.24 Aligned_cols=78 Identities=10% Similarity=-0.009 Sum_probs=48.5
Q ss_pred HHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCC-------chhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCc
Q 037237 51 NEGLRALSAFQSGDSKKALEMIKESISSHQDS-------PHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPN 123 (1267)
Q Consensus 51 ~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s-------~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~ 123 (1267)
.-...|.-.+..|++.+|+...+..+...|.. +.++..-|.++..+. +. +.- +..+.++..+.|+
T Consensus 40 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~----~~-~~A---~~~~~~~~~~~~~ 111 (131)
T 1elr_A 40 YITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEE----KY-KDA---IHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhc----cH-HHH---HHHHHHHHHhCCC
Confidence 34566777889999999999999999887655 444444455444332 22 111 3345567888884
Q ss_pred hhhhHHHHHHHHHH
Q 037237 124 LVELSFLHAALLYK 137 (1267)
Q Consensus 124 s~~~a~f~A~lL~~ 137 (1267)
.......+.+.-.
T Consensus 112 -~~~~~~l~~~~~~ 124 (131)
T 1elr_A 112 -PDVLKKCQQAEKI 124 (131)
T ss_dssp -HHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHH
Confidence 4444444444333
No 335
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=47.52 E-value=26 Score=36.38 Aligned_cols=97 Identities=11% Similarity=0.027 Sum_probs=50.3
Q ss_pred HHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCC------chhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCch
Q 037237 51 NEGLRALSAFQSGDSKKALEMIKESISSHQDS------PHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNL 124 (1267)
Q Consensus 51 ~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s------~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s 124 (1267)
.-...|.-.+..|++.+|++.+++.+...+.. +.++..-|.++..+ .+. +--..| +.+|..++|..
T Consensus 225 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~----g~~-~~A~~~---~~~a~~~~~~~ 296 (338)
T 3ro2_A 225 AYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLL----QDY-EKAIDY---HLKHLAIAQEL 296 (338)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT----TCH-HHHHHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHh----cCH-HHHHHH---HHHHHHHHHhc
Confidence 34445555666777777777777766444221 22333333333322 122 212222 33455554433
Q ss_pred h------hhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccC
Q 037237 125 V------ELSFLHAALLYKLAEINDKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 125 ~------~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~ 160 (1267)
- ..-...|.+++.+| .|++|+.-.++|+.+.
T Consensus 297 ~~~~~~~~~~~~la~~~~~~g-----~~~~A~~~~~~a~~~~ 333 (338)
T 3ro2_A 297 KDRIGEGRACWSLGNAYTALG-----NHDQAMHFAEKHLEIS 333 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHHHT-----CHHHHHHHHHHHHHC-
T ss_pred CCcHHHHHHHHHHHHHHHHcC-----ChHHHHHHHHHHHHHH
Confidence 2 22334455555555 4799999999999885
No 336
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.31 E-value=12 Score=34.53 Aligned_cols=29 Identities=14% Similarity=0.217 Sum_probs=24.6
Q ss_pred eeecCccccccCChHHHHHHhHhhhcccC
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNHL 357 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~l 357 (1267)
-+.|+.|++.|.....|..|+..-|...-
T Consensus 80 ~~~C~~C~k~f~~~~~L~~H~~~hh~~~~ 108 (115)
T 2dmi_A 80 VLKCMYCGHSFESLQDLSVHMIKTKHYQK 108 (115)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHHHTTTTTC
T ss_pred ceECCCCCCccCCHHHHHHHHHHhCCccc
Confidence 36899999999999999999987776543
No 337
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=46.22 E-value=39 Score=32.88 Aligned_cols=98 Identities=6% Similarity=-0.049 Sum_probs=58.0
Q ss_pred HHHHHHHHHhHhhcCCHHHHHHHHHHHHhhC------CCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhcc--
Q 037237 49 INNEGLRALSAFQSGDSKKALEMIKESISSH------QDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGR-- 120 (1267)
Q Consensus 49 i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h------~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l-- 120 (1267)
...-...|.-....|++.+|++..++.+... +..+.++..-|.++..+. +. +.-..|+ .+|..+
T Consensus 26 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g----~~-~~A~~~~---~~al~~~~ 97 (203)
T 3gw4_A 26 SGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAG----NW-DAARRCF---LEERELLA 97 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT----CH-HHHHHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcC----CH-HHHHHHH---HHHHHHHH
Confidence 4444566777888999999999999988633 233444555555554432 33 2223333 334444
Q ss_pred -CCchh-h---hHHHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 121 -FPNLV-E---LSFLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 121 -~p~s~-~---~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
.|+.. . .-...|.+++.+| .|++|+...++|+.+
T Consensus 98 ~~~~~~~~~~~~~~~lg~~~~~~g-----~~~~A~~~~~~al~~ 136 (203)
T 3gw4_A 98 SLPEDPLAASANAYEVATVALHFG-----DLAGARQEYEKSLVY 136 (203)
T ss_dssp HSCCCHHHHHHHHHHHHHHHHHHT-----CHHHHHHHHHHHHHH
T ss_pred HcCccHHHHHHHHHHHHHHHHHhC-----CHHHHHHHHHHHHHH
Confidence 44221 1 1223455555544 489999999999877
No 338
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=51.57 E-value=4.4 Score=50.52 Aligned_cols=72 Identities=15% Similarity=0.127 Sum_probs=62.0
Q ss_pred ccCCCchhHHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhcc
Q 037237 41 AINSSDPEINNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGR 120 (1267)
Q Consensus 41 ~~~~~~~~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l 120 (1267)
-.+|.++.+ ++|.+++..|++.=|+.++.-++.-.|+..-+..+.+.++-+++...++. ..+--||.+ |.+|
T Consensus 457 ~~Gg~~~~~----~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~~-~~rn~yl~~---a~el 528 (668)
T 2yhe_A 457 AMGGADAVL----KQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTENA-LWRNMYMTG---AMEL 528 (668)
Confidence 356777765 48899999999999999999999999988889999999999999999998 788888877 4444
No 339
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=45.00 E-value=15 Score=32.19 Aligned_cols=26 Identities=15% Similarity=0.203 Sum_probs=22.8
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
..|..|++.|.....|..|+.. |.+.
T Consensus 14 y~C~~CgK~F~~~s~L~~H~r~-Htg~ 39 (66)
T 2epp_A 14 LPCGLCGKVFTDANRLRQHEAQ-HGVT 39 (66)
T ss_dssp CCCTTTCCCCSCHHHHHHHHHH-HTTT
T ss_pred cCCCCCCCccCCHHHHHhhhhh-hCCC
Confidence 5799999999999999999985 7663
No 340
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=44.71 E-value=11 Score=31.97 Aligned_cols=26 Identities=19% Similarity=0.250 Sum_probs=22.1
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|+.|++.|.....|..|+.. |.+
T Consensus 42 ~~~C~~C~~~f~~~~~L~~H~~~-H~~ 67 (72)
T 1x6e_A 42 PYKCLECGKAFSQNSGLINHQRI-HTS 67 (72)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HHS
T ss_pred CeECCCCCcccCCHHHHHHHHHh-cCC
Confidence 47899999999999999999874 543
No 341
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=43.69 E-value=2.3 Score=30.46 Aligned_cols=25 Identities=16% Similarity=0.396 Sum_probs=21.1
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
..|+.|++.|.....+..|+. -|.+
T Consensus 3 ~~C~~C~k~f~~~~~L~~H~~-~H~~ 27 (32)
T 2kfq_A 3 FACPACPKRFMRSDALSKHIK-TAFI 27 (32)
T ss_dssp SSSSSSCTTHHHHHTTSSSTT-SSSS
T ss_pred CCCCCCCcccCCHHHHHHHHH-HHcc
Confidence 469999999999999999986 4654
No 342
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=43.66 E-value=18 Score=40.03 Aligned_cols=99 Identities=16% Similarity=0.178 Sum_probs=60.1
Q ss_pred HHHHhHhhcCCHHHHHHHHHHHHhhCC---C---CchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhh
Q 037237 54 LRALSAFQSGDSKKALEMIKESISSHQ---D---SPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVEL 127 (1267)
Q Consensus 54 ~~a~~~~~~Gnh~kAL~~~kd~~~~h~---~---s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~ 127 (1267)
-++.-.+..|++.+|+...+......+ + -+.++..-|.+++.+. +. +.- +.-+.+|..++++....
T Consensus 106 ~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~----~~-~~A---~~~~~~al~~~~~~~~~ 177 (378)
T 3q15_A 106 FRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMK----QT-HVS---MYHILQALDIYQNHPLY 177 (378)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHHHHHTSTTC
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcC----Cc-HHH---HHHHHHHHHHHHhCCCc
Confidence 356677899999999999999875432 1 2334444444444332 33 222 33355577777765443
Q ss_pred HHHHHHHHHHHHhhh--chhHHHHHHHHHHHhccC
Q 037237 128 SFLHAALLYKLAEIN--DKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 128 a~f~A~lL~~la~~~--~~~Y~~a~~ec~RaL~i~ 160 (1267)
....|..++.+|.-. ...|++|+.-..+||.+.
T Consensus 178 ~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~ 212 (378)
T 3q15_A 178 SIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELA 212 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 334455555555432 125899999999999874
No 343
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.60 E-value=12 Score=32.21 Aligned_cols=27 Identities=19% Similarity=0.159 Sum_probs=22.7
Q ss_pred eeeecCccccccCChHHHHHHhHhhhcc
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+-+.|..|++.|.....|..|+.. |.+
T Consensus 6 k~~~C~~C~k~f~~~~~L~~H~~~-h~~ 32 (78)
T 2d9h_A 6 SGLQCEICGFTCRQKASLNWHQRK-HAE 32 (78)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHH-HHH
T ss_pred cCeECCCCCCeeCCHHHHHHHHHH-hhc
Confidence 347899999999999999999874 543
No 344
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.55 E-value=11 Score=33.36 Aligned_cols=25 Identities=12% Similarity=0.052 Sum_probs=23.0
Q ss_pred cCccccccCChHHHHHHhHhhhccc
Q 037237 332 CFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 332 C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
|+.|++.|.....+..|+...|.+.
T Consensus 28 C~~C~k~f~~~~~L~~H~~~~H~~~ 52 (95)
T 2ej4_A 28 KKSCDRTFSTMHELVTHVTMEHVGG 52 (95)
T ss_dssp CCCCCCCCSSHHHHHHHHHHTTTCC
T ss_pred ccccccccCCHHHHHHHHHHhccCC
Confidence 9999999999999999998778775
No 345
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=43.35 E-value=11 Score=32.01 Aligned_cols=27 Identities=22% Similarity=0.396 Sum_probs=22.8
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. -|.+.
T Consensus 45 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 71 (74)
T 2lce_A 45 PYRCNICGAQFNRPANLKTHTR-IHSGE 71 (74)
T ss_dssp SEECTTTCCEESCHHHHHHHHH-HHCCS
T ss_pred CEECCCCCchhCCHHHHHHHHH-hcCCC
Confidence 3789999999999999999996 46543
No 346
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=43.02 E-value=13 Score=31.44 Aligned_cols=27 Identities=22% Similarity=0.354 Sum_probs=22.8
Q ss_pred eeeecCccccccCChHHHHHHhHhhhcc
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+-+.|+.|++.|.....+..|+.. |.+
T Consensus 13 k~~~C~~C~k~f~~~~~L~~H~~~-h~~ 39 (72)
T 1x6e_A 13 KPYGCVECGKAFSRSSILVQHQRV-HTG 39 (72)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHG-GGC
T ss_pred CCccCCCCCCccCCHHHHHHHHHh-cCC
Confidence 347899999999999999999974 544
No 347
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=42.53 E-value=11 Score=31.84 Aligned_cols=21 Identities=19% Similarity=0.570 Sum_probs=19.6
Q ss_pred eecCccccccCChHHHHHHhH
Q 037237 330 SECFVCVEKIGNPQLCEKHFR 350 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~ 350 (1267)
+.|+.|++.|.....+..|+.
T Consensus 50 ~~C~~C~~~f~~~~~l~~H~~ 70 (73)
T 1f2i_G 50 FQCRICMRNFSRSDHLTTHIR 70 (73)
T ss_dssp EECTTTCCEESCHHHHHHHHT
T ss_pred eECCCCCchhCCHHHHHHHHH
Confidence 789999999999999999986
No 348
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.37 E-value=9.9 Score=34.61 Aligned_cols=26 Identities=15% Similarity=0.218 Sum_probs=22.8
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|+.|++.|.....|..|+..-|-.
T Consensus 55 ~~C~~C~k~F~~~~~L~~H~~~h~~~ 80 (98)
T 2gqj_A 55 LKCQHCRKQFKSKAGLNYHTMAEHSA 80 (98)
T ss_dssp HSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred EECCCCCCccCCHHHHHHHHHHHcCC
Confidence 58999999999999999999866643
No 349
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=42.13 E-value=40 Score=36.39 Aligned_cols=95 Identities=12% Similarity=0.017 Sum_probs=44.9
Q ss_pred hcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHHHHHHHHh
Q 037237 61 QSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAALLYKLAE 140 (1267)
Q Consensus 61 ~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~lL~~la~ 140 (1267)
..|++.+|+...+..+..++.... ....+..+..+|...... +.... +..+++|+.++|+.- -....+..++.+|.
T Consensus 88 ~~g~~~~A~~~~~~Al~l~~~~g~-~~~~a~~~~~lg~~~~~g-~~~~A-~~~~~~Al~~~~~~~-~~~~~~~~~~~lg~ 163 (307)
T 2ifu_A 88 DLQRMPEAVQYIEKASVMYVENGT-PDTAAMALDRAGKLMEPL-DLSKA-VHLYQQAAAVFENEE-RLRQAAELIGKASR 163 (307)
T ss_dssp HTTCGGGGHHHHHHHHHHHHTTTC-HHHHHHHHHHHHHHHTTT-CHHHH-HHHHHHHHHHHHHTT-CHHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHcC-CHHHH-HHHHHHHHHHHHhCC-ChhHHHHHHHHHHH
Confidence 346666666666655544321100 011233334444333221 11110 444566777776531 11122333444443
Q ss_pred hhc--hhHHHHHHHHHHHhcc
Q 037237 141 IND--KEWDVVIEACERMLKI 159 (1267)
Q Consensus 141 ~~~--~~Y~~a~~ec~RaL~i 159 (1267)
-.. ..|++|+...++++.+
T Consensus 164 ~~~~~g~~~~A~~~~~~al~~ 184 (307)
T 2ifu_A 164 LLVRQQKFDEAAASLQKEKSM 184 (307)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHH
Confidence 221 1589999999999987
No 350
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.67 E-value=14 Score=28.65 Aligned_cols=24 Identities=17% Similarity=0.285 Sum_probs=20.7
Q ss_pred eecCc--cccccCChHHHHHHhHhhhc
Q 037237 330 SECFV--CVEKIGNPQLCEKHFRSSHW 354 (1267)
Q Consensus 330 W~C~~--C~~kF~d~~~~~~H~~~eH~ 354 (1267)
..|+. |++.|.....|..|+. -|-
T Consensus 10 ~~C~~~~C~k~F~~~~~L~~H~r-~Ht 35 (38)
T 2eln_A 10 LKCPTDGCDYSTPDKYKLQAHLK-VHT 35 (38)
T ss_dssp EECSSSSCCCEESCHHHHHHHHH-HHS
T ss_pred CCCCCCCCCCccCCHHHHHHHHH-hcC
Confidence 58986 9999999999999986 454
No 351
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=41.66 E-value=68 Score=31.07 Aligned_cols=105 Identities=10% Similarity=-0.050 Sum_probs=58.1
Q ss_pred hhHHHHHHHHHhHhhcCCHHHHHHHHHHHHhh---CCCC----chhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhc
Q 037237 47 PEINNEGLRALSAFQSGDSKKALEMIKESISS---HQDS----PHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVG 119 (1267)
Q Consensus 47 ~~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~---h~~s----~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~ 119 (1267)
.....-...|.-+...|++.+|++..++.+.. +++. +.++..-|.++..+. +. +--..++.. |..
T Consensus 64 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g----~~-~~A~~~~~~---al~ 135 (203)
T 3gw4_A 64 AEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFG----DL-AGARQEYEK---SLV 135 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHT----CH-HHHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhC----CH-HHHHHHHHH---HHH
Confidence 34455566777888999999999999998866 3322 334455555555443 33 323333332 333
Q ss_pred cCCchhhhHHHHHHHHHHHHhhh--chhHHHHHHHHHHHhccC
Q 037237 120 RFPNLVELSFLHAALLYKLAEIN--DKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 120 l~p~s~~~a~f~A~lL~~la~~~--~~~Y~~a~~ec~RaL~i~ 160 (1267)
+++.. .-....|..++.+|.-. ...|++|+.-.++|+.+.
T Consensus 136 ~~~~~-~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 177 (203)
T 3gw4_A 136 YAQQA-DDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIF 177 (203)
T ss_dssp HHHHT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHhc-cchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHH
Confidence 32211 11122233333333221 125899999999988874
No 352
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=41.65 E-value=13 Score=31.69 Aligned_cols=26 Identities=19% Similarity=0.276 Sum_probs=22.8
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
..|..|++.|.....|..|+. -|.+.
T Consensus 5 y~C~~C~k~F~~~~~L~~H~~-~Ht~e 30 (60)
T 4gzn_C 5 FFCNFCGKTYRDASGLSRHRR-AHLGY 30 (60)
T ss_dssp EECTTTCCEESSHHHHHHHHH-HHHTC
T ss_pred ccCCCCCCEeCCHHHHHHHHH-HhCCC
Confidence 479999999999999999997 48764
No 353
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=41.65 E-value=12 Score=32.85 Aligned_cols=25 Identities=20% Similarity=0.538 Sum_probs=20.6
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|+.|++.|.....+..|+.. |.+
T Consensus 4 ~~C~~C~k~f~~~~~L~~H~~~-H~~ 28 (88)
T 1llm_C 4 FQCRICMRNFSRSDHLTTHIRT-HTG 28 (88)
T ss_dssp EECTTTCCEESCHHHHHHHHHH-HHC
T ss_pred CcCCCCCCccCCHHHHHHHHHH-cCC
Confidence 6789999999999999999874 654
No 354
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=41.32 E-value=13 Score=31.78 Aligned_cols=23 Identities=22% Similarity=0.322 Sum_probs=19.8
Q ss_pred eeecCccccccCChHHHHHHhHh
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRS 351 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~ 351 (1267)
-+.|+.|++.|.....+..|+..
T Consensus 57 ~~~C~~C~~~f~~~~~l~~H~~~ 79 (82)
T 2kmk_A 57 PHKCQVCGKAFSQSSNLITHSRK 79 (82)
T ss_dssp CEECTTTSCEESSHHHHHHHHHH
T ss_pred CCcCCCcchhhCChHHHHHHHHh
Confidence 37899999999999999999874
No 355
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=41.26 E-value=13 Score=32.76 Aligned_cols=25 Identities=20% Similarity=0.351 Sum_probs=23.0
Q ss_pred eecCccccccCChHHHHHHhHhhhc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHW 354 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~ 354 (1267)
+.|+.|++.|.....+..|+...|.
T Consensus 32 ~~C~~C~k~f~~~~~L~~H~~~h~~ 56 (88)
T 1llm_C 32 FACDICGRKFARSDERKRHRDIQHI 56 (88)
T ss_dssp EECTTTCCEESSHHHHHHHHHHHTH
T ss_pred ccCCCCCCccCCHHHHHHHHHHhCC
Confidence 6899999999999999999998773
No 356
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=40.89 E-value=46 Score=37.10 Aligned_cols=98 Identities=10% Similarity=-0.026 Sum_probs=74.4
Q ss_pred hhHHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhh-------hHHHHHHHHHhCCCcchhhhhhhhhhhhhc
Q 037237 47 PEINNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLE-------AFIHHSLAEKAGKGTDTQLEHLTTAASAVG 119 (1267)
Q Consensus 47 ~~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~q-------g~v~~~lA~~~~~~~~~k~~~l~~~~~Av~ 119 (1267)
..++.--.+|... +.+|...|++...++....|..+-++.-- |.+...+.+-.+ . +...+++++
T Consensus 5 ~~~~~~~~~~~~~-~~~d~~~A~~~F~~a~~~dP~~~Daw~g~~a~g~~~~~~L~~~~r~~~-a-------~~~~~~~l~ 75 (282)
T 4f3v_A 5 DRLASLFESAVSM-LPMSEARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWYSRR-N-------FGQLSGSVQ 75 (282)
T ss_dssp HHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTCCCHHHHHHHHHTGG-G-------TTHHHHTTT
T ss_pred HHHHHHHHHHhcc-cCCCHHHHHHHHHHHHHhChhhhHHHHhHHHccCCcHHHHHHHHHHHH-H-------HHHHHHHhc
Confidence 4677777888886 79999999999999999999877777644 778877776543 2 556778999
Q ss_pred cCCchhhhHHH---------------------HHHHHHHHHhhhchhHHHHHHHHHHHhc
Q 037237 120 RFPNLVELSFL---------------------HAALLYKLAEINDKEWDVVIEACERMLK 158 (1267)
Q Consensus 120 l~p~s~~~a~f---------------------~A~lL~~la~~~~~~Y~~a~~ec~RaL~ 158 (1267)
+.|+.+....- ||.+|..+++ |++|.+.-.+.+.
T Consensus 76 l~p~~l~a~~~~~g~y~~~~~~v~~r~dl~LayA~~L~~~g~-----y~eA~~~l~~~~~ 130 (282)
T 4f3v_A 76 ISMSTLNARIAIGGLYGDITYPVTSPLAITMGFAACEAAQGN-----YADAMEALEAAPV 130 (282)
T ss_dssp CCGGGGCCEEECCTTTCCCEEECSSHHHHHHHHHHHHHHHTC-----HHHHHHHHTSSCC
T ss_pred CChhhhhhhhccCCcccccccccCCHhHHHHHHHHHHHHCCC-----HHHHHHHHHHHHh
Confidence 99988854433 8999988885 7888777654443
No 357
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=40.75 E-value=32 Score=34.10 Aligned_cols=52 Identities=15% Similarity=0.288 Sum_probs=44.9
Q ss_pred hhHHHHHH--HHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHH
Q 037237 47 PEINNEGL--RALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAE 98 (1267)
Q Consensus 47 ~~i~~e~~--~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~ 98 (1267)
+.-+.||- -|+..++-|||.+|++.++.++...|+...+..++..|.-+.++
T Consensus 70 p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i~k 123 (126)
T 1nzn_A 70 KEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 123 (126)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 55567774 68999999999999999999999999999999999888877664
No 358
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=40.66 E-value=14 Score=31.57 Aligned_cols=24 Identities=17% Similarity=0.358 Sum_probs=20.3
Q ss_pred eecCccccccCChHHHHHHhHhhhc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHW 354 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~ 354 (1267)
+.|+.|++.|.+...+..|+.. |.
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~-h~ 25 (82)
T 2kmk_A 2 FDCKICGKSFKRSSTLSTHLLI-HS 25 (82)
T ss_dssp EECSSSCCEESSHHHHHHHHHH-HH
T ss_pred ccCCCCcccccCchhHHHHHHH-cC
Confidence 5799999999999999999875 44
No 359
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=40.25 E-value=14 Score=32.62 Aligned_cols=29 Identities=24% Similarity=0.331 Sum_probs=21.7
Q ss_pred eeeecCccccccCChHHHHHHhHhhhcccC
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSHWNHL 357 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH~~~l 357 (1267)
+-+.|+.|++.|.....|..|+.. |-+.-
T Consensus 63 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~ 91 (96)
T 2dmd_A 63 RPFKCQICPYASRNSSQLTVHLRS-HTGDS 91 (96)
T ss_dssp CCEECSSSSCEESSHHHHHHHHTT-CCSCC
T ss_pred CCccCCCCCCccCCHHHHHHHHHH-hcCCC
Confidence 346788899999999999999874 54443
No 360
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=40.12 E-value=14 Score=31.49 Aligned_cols=27 Identities=19% Similarity=0.135 Sum_probs=23.0
Q ss_pred eeeecCccccccCChHHHHHHhHhhhcc
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+-+.|+.|++.|.....+..|+.. |.+
T Consensus 16 ~~~~C~~C~k~f~~~~~l~~H~~~-H~~ 42 (74)
T 2lce_A 16 KPYKCDRCQASFRYKGNLASHKTV-HTG 42 (74)
T ss_dssp CSBCCTTSSCCBSCHHHHHHHHHH-HCC
T ss_pred CCeECCCCCceeCCHHHHHHHHHH-cCC
Confidence 457899999999999999999974 544
No 361
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=40.07 E-value=15 Score=26.82 Aligned_cols=26 Identities=23% Similarity=0.419 Sum_probs=21.3
Q ss_pred eeecCc--cccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFV--CVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~--C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|.+ |++.|.....+..|+. -|.+
T Consensus 8 ~~~C~~~~C~k~f~~~~~L~~H~~-~H~~ 35 (37)
T 1va1_A 8 QHICHIQGCGKVYGKTSHLRAHLR-WHTG 35 (37)
T ss_dssp CEECCSTTCCCEESCHHHHHHHHH-HHHT
T ss_pred CCCCCCCCCCCccCCHHHHHHHHH-hcCC
Confidence 368985 9999999999999987 3543
No 362
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=39.78 E-value=13 Score=34.01 Aligned_cols=26 Identities=27% Similarity=0.390 Sum_probs=22.4
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
.-+|+.|++.|.....|..|+.. |-+
T Consensus 28 ~h~C~~Cgk~F~~~~~L~~H~~~-H~~ 53 (85)
T 2lv2_A 28 CHLCPVCGESFASKGAQERHLRL-LHA 53 (85)
T ss_dssp TEECTTSCCEESSHHHHHHHHHT-TSC
T ss_pred CEECCCCCCCcCcHHHHhhhhhh-ccC
Confidence 45899999999999999999984 544
No 363
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=39.66 E-value=14 Score=33.74 Aligned_cols=28 Identities=21% Similarity=0.329 Sum_probs=23.6
Q ss_pred eeeecCccccccCChHHHHHHhHhhhcc
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+-+.|+.|++.|.....|..|+..-|..
T Consensus 64 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~ 91 (110)
T 2csh_A 64 KPYECNICAKRFMWRDSFHRHVTSCTKS 91 (110)
T ss_dssp CCEECSSSCCEESCHHHHHHHHHHHHHH
T ss_pred CCeeCCCCcchhcCHHHHHHHHHHcccc
Confidence 3478999999999999999999865544
No 364
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=39.59 E-value=69 Score=33.22 Aligned_cols=101 Identities=7% Similarity=-0.056 Sum_probs=62.3
Q ss_pred HHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHH
Q 037237 51 NEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFL 130 (1267)
Q Consensus 51 ~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f 130 (1267)
.-...+.-++..|++.+|++..+..+. ++.+.+++.-|.++..--....+. +-- +..+.+|+.+. +......
T Consensus 8 a~~~lg~~~~~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~g~~~~~~~-~~A---~~~~~~a~~~~--~~~a~~~ 79 (273)
T 1ouv_A 8 ELVGLGAKSYKEKDFTQAKKYFEKACD--LKENSGCFNLGVLYYQGQGVEKNL-KKA---ASFYAKACDLN--YSNGCHL 79 (273)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHTSSSCCCH-HHH---HHHHHHHHHTT--CHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCcCCCH-HHH---HHHHHHHHHCC--CHHHHHH
Confidence 345667788899999999999999986 677778888887776511112232 222 23344566553 3333334
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHHhccC
Q 037237 131 HAALLYKLAEINDKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 131 ~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~ 160 (1267)
.|.+++. +.-....|++|+.-.++|+...
T Consensus 80 lg~~~~~-g~~~~~~~~~A~~~~~~a~~~~ 108 (273)
T 1ouv_A 80 LGNLYYS-GQGVSQNTNKALQYYSKACDLK 108 (273)
T ss_dssp HHHHHHH-TSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHhC-CCCcccCHHHHHHHHHHHHHcC
Confidence 4444433 1111235899999999998873
No 365
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=39.36 E-value=16 Score=31.43 Aligned_cols=27 Identities=11% Similarity=0.109 Sum_probs=23.1
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|+.|++.|.....|..|+..-|..
T Consensus 47 ~~~C~~C~~~f~~~~~L~~H~~~h~~~ 73 (86)
T 1x6h_A 47 AFVCSKCGKTFTRRNTMARHADNCAGP 73 (86)
T ss_dssp CEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred ceECCCCCChhCCHHHHHHHHHHccCC
Confidence 478999999999999999999865544
No 366
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=39.18 E-value=12 Score=34.26 Aligned_cols=27 Identities=15% Similarity=0.270 Sum_probs=23.6
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+.|+.|++.|.....|..|+..-|.+.
T Consensus 70 ~~C~~C~~~f~~~~~L~~H~~~~H~~~ 96 (107)
T 1wjp_A 70 LTCLECMRTFKSSFSIWRHQVEVHNQN 96 (107)
T ss_dssp GEEGGGTEECSSHHHHHHHHHHTSCCC
T ss_pred ccCccccchhCCHHHHHHHHHHHcCCC
Confidence 689999999999999999998788664
No 367
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=39.12 E-value=31 Score=42.73 Aligned_cols=69 Identities=14% Similarity=0.180 Sum_probs=60.2
Q ss_pred cCCCchhHHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhh
Q 037237 42 INSSDPEINNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAA 115 (1267)
Q Consensus 42 ~~~~~~~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~ 115 (1267)
.+|.++.+ ++|..++..|+|.=|++++.-++.-.|+..-++.+.+.++-+++...++. .-+--||.+|.
T Consensus 446 ~gg~~~~~----~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~~~~-~~r~~yl~~a~ 514 (658)
T 2cfu_A 446 MGGAERLL----EQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQAENA-GWRNSYLSAAY 514 (658)
T ss_dssp TTCHHHHH----HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCSSH-HHHHHHHHHHH
T ss_pred hcCHHHHH----HHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhccCh-HHHHHHHHHHH
Confidence 45555554 58899999999999999999999999999999999999999999999998 88888877743
No 368
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=38.85 E-value=26 Score=38.47 Aligned_cols=100 Identities=16% Similarity=0.129 Sum_probs=57.1
Q ss_pred HHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhC---CCcchhhhhhhhhhhhhccCCch--
Q 037237 50 NNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAG---KGTDTQLEHLTTAASAVGRFPNL-- 124 (1267)
Q Consensus 50 ~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~---~~~~~k~~~l~~~~~Av~l~p~s-- 124 (1267)
..-...|.-++..|++.+|++.+++.+...+.... +...+.+++.+|...- +. +-- +..+.+|..++|+.
T Consensus 224 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~-~~~~~~~~~~la~~~~~~g~~-~~A---~~~~~~al~~~~~~~~ 298 (411)
T 4a1s_A 224 RACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGD-RAAERRANSNLGNSHIFLGQF-EDA---AEHYKRTLALAVELGE 298 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHTTTCH-HHH---HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHCcCH-HHH---HHHHHHHHHHHHHcCC
Confidence 34556677788999999999999999866542211 1122233333333221 22 222 22234455555543
Q ss_pred ----hhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 125 ----VELSFLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 125 ----~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
.......|.+++.+| .|++|+.-.++|+.+
T Consensus 299 ~~~~~~~~~~la~~~~~~g-----~~~~A~~~~~~al~~ 332 (411)
T 4a1s_A 299 REVEAQSCYSLGNTYTLLH-----EFNTAIEYHNRHLAI 332 (411)
T ss_dssp HHHHHHHHHHHHHHHHHTT-----CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHH
Confidence 233334455544444 478999999888887
No 369
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=38.78 E-value=60 Score=37.81 Aligned_cols=70 Identities=10% Similarity=-0.033 Sum_probs=52.2
Q ss_pred hhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHHHHHHH
Q 037237 60 FQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAALLYKL 138 (1267)
Q Consensus 60 ~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~lL~~l 138 (1267)
.+.|+..+|..+.+.++..+|.++.++..-|.+..+.. +. + +. ...+.||+...| ++.+-..+|..+...
T Consensus 23 ~~~~~~~~a~~~~e~al~~~P~~~~~w~~~~~~~~~~~----~~-~-~a--~~~~~ral~~~p-~~~lw~~~~~~~~~~ 92 (530)
T 2ooe_A 23 AQNQPIDKARKTYERLVAQFPSSGRFWKLYIEAEIKAK----NY-D-KV--EKLFQRCLMKVL-HIDLWKCYLSYVRET 92 (530)
T ss_dssp HHSSCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTT----CH-H-HH--HHHHHHHTTTCC-CHHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhcC----CH-H-HH--HHHHHHHHhcCC-ChHHHHHHHHHHHHH
Confidence 56899999999999999999999988888777766542 22 1 11 334678999999 677777777655543
No 370
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=38.48 E-value=44 Score=27.98 Aligned_cols=45 Identities=9% Similarity=0.043 Sum_probs=37.6
Q ss_pred HHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHH
Q 037237 52 EGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSL 96 (1267)
Q Consensus 52 e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~l 96 (1267)
-...|.-.++.|++.+|++..+.++..+|+.+.++..-|.++..+
T Consensus 46 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~ 90 (91)
T 1na3_A 46 WYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQ 90 (91)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhc
Confidence 345677788899999999999999999998888888888777653
No 371
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=38.23 E-value=49 Score=36.98 Aligned_cols=87 Identities=10% Similarity=-0.002 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccC---CchhhhHHHHHHHHHHHHhh
Q 037237 65 SKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRF---PNLVELSFLHAALLYKLAEI 141 (1267)
Q Consensus 65 h~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~---p~s~~~a~f~A~lL~~la~~ 141 (1267)
+.+||+.++.+|..+|+...+.+-.|.++.++.+..+.- ..-+.+++.+. |.+...-.|.|..+-+.|
T Consensus 202 ~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~~~~~~-------~~~~~~~~~~~~~~~~s~~al~~la~~~~~~~-- 272 (306)
T 3dra_A 202 IDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRSITQL-------EEFSLQFVDLEKDQVTSSFALETLAKIYTQQK-- 272 (306)
T ss_dssp HHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCCGGGG-------HHHHHTTEEGGGTEESCHHHHHHHHHHHHHTT--
T ss_pred HHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCCChHHH-------HHHHHHHHhccCCCCCCHHHHHHHHHHHHccC--
Confidence 778888888888888877666666777776655322111 12233355554 667666667777766554
Q ss_pred hchhHHHHHHHHHHHhccCCCC
Q 037237 142 NDKEWDVVIEACERMLKIGDPY 163 (1267)
Q Consensus 142 ~~~~Y~~a~~ec~RaL~i~~P~ 163 (1267)
.+++|++-|.++..--+|.
T Consensus 273 ---~~~~A~~~~~~l~~~~Dpi 291 (306)
T 3dra_A 273 ---KYNESRTVYDLLKSKYNPI 291 (306)
T ss_dssp ---CHHHHHHHHHHHHHTTCGG
T ss_pred ---CHHHHHHHHHHHHhccChH
Confidence 3699999999977544453
No 372
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=37.37 E-value=1e+02 Score=33.99 Aligned_cols=102 Identities=15% Similarity=-0.058 Sum_probs=62.3
Q ss_pred hHHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCC---C---CchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhc--
Q 037237 48 EINNEGLRALSAFQSGDSKKALEMIKESISSHQ---D---SPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVG-- 119 (1267)
Q Consensus 48 ~i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~---~---s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~-- 119 (1267)
.+..-..-|.-.+..|++.+|++..+..+...+ + .+.++.--|.++..+. +. +--..| +.+|..
T Consensus 181 ~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~----~~-~~A~~~---~~~al~~~ 252 (378)
T 3q15_A 181 TIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSG----DD-QMAVEH---FQKAAKVS 252 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT----CH-HHHHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCC----CH-HHHHHH---HHHHHHHH
Confidence 344445667778889999999999999886432 2 1233334444444332 33 222233 344555
Q ss_pred ---cCCchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCC
Q 037237 120 ---RFPNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDP 162 (1267)
Q Consensus 120 ---l~p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P 162 (1267)
-.|.....-...|.+++.+|+ |++|+.-.++|+.+...
T Consensus 253 ~~~~~~~~~~~~~~la~~~~~~g~-----~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 253 REKVPDLLPKVLFGLSWTLCKAGQ-----TQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHCGGGHHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHHCCT
T ss_pred HhhCChhHHHHHHHHHHHHHHCCC-----HHHHHHHHHHHHHHHHH
Confidence 455554444455666666554 89999999999998543
No 373
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=37.05 E-value=17 Score=31.57 Aligned_cols=26 Identities=19% Similarity=0.355 Sum_probs=21.5
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|+.|++.|.....+..|+. -|.+
T Consensus 62 ~~~C~~C~~~f~~~~~l~~H~~-~H~~ 87 (90)
T 1a1h_A 62 PFACDICGRKFARSDERKRHTK-IHLR 87 (90)
T ss_dssp CEECTTTCCEESSHHHHHHHHG-GGGC
T ss_pred CccCCCCCchhCCHHHHHHHHH-Hhcc
Confidence 3689999999999999999987 3543
No 374
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=36.91 E-value=18 Score=26.32 Aligned_cols=25 Identities=20% Similarity=0.201 Sum_probs=21.2
Q ss_pred eecC--ccccccCChHHHHHHhHhhhcc
Q 037237 330 SECF--VCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~--~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|. .|++.|.....+..|+. -|.+
T Consensus 7 ~~C~~~~C~k~f~~~~~L~~H~~-~H~~ 33 (38)
T 1bhi_A 7 FLCTAPGCGQRFTNEDHLAVHKH-KHEM 33 (38)
T ss_dssp EECCCTTTCCEESSHHHHHHHHH-HHHT
T ss_pred eECCCCCCCcccCCHHHHHHHHH-HhCC
Confidence 6799 59999999999999986 4654
No 375
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=36.88 E-value=17 Score=32.14 Aligned_cols=26 Identities=27% Similarity=0.330 Sum_probs=22.5
Q ss_pred eeeecCccccccCChHHHHHHhHhhh
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSH 353 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH 353 (1267)
+-+.|+.|++.|.....+..|+...|
T Consensus 34 ~~~~C~~C~~~f~~~~~l~~H~~~h~ 59 (95)
T 2yt9_A 34 KPYSCPVCGLRFKRKDRMSYHVRSHD 59 (95)
T ss_dssp CSEECSSSCCEESCHHHHHHHHHHHC
T ss_pred CCCcCCCCCCccCCHHHHHHHHHHhc
Confidence 45899999999999999999997543
No 376
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=36.76 E-value=16 Score=31.23 Aligned_cols=28 Identities=21% Similarity=0.173 Sum_probs=23.3
Q ss_pred eeeecCccccccCChHHHHHHhHhhhccc
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+-+.|+.|++.|.....|..|+. .|.+.
T Consensus 45 ~~~~C~~C~~~f~~~~~L~~H~~-~H~~~ 72 (77)
T 2cot_A 45 KPYKCDECGKAFIQRSHLIGHHR-VHTGS 72 (77)
T ss_dssp CSEECSSSCCEESSHHHHHHHGG-GSCCC
T ss_pred cCeeCCCCCCccCCHHHHHHHHH-HhCCC
Confidence 34789999999999999999996 46543
No 377
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.55 E-value=11 Score=34.32 Aligned_cols=33 Identities=24% Similarity=0.451 Sum_probs=27.1
Q ss_pred eeecCccccccC-------ChHHHHHHhHhhhcccCcccc
Q 037237 329 FSECFVCVEKIG-------NPQLCEKHFRSSHWNHLEIMV 361 (1267)
Q Consensus 329 fW~C~~C~~kF~-------d~~~~~~H~~~eH~~~l~p~~ 361 (1267)
+=.|..|++.++ -+..|+.|+...|...|+..-
T Consensus 28 ~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~e~~~~~ 67 (76)
T 2djr_A 28 YATCRLCGRQVSRGPGVNVGTTALWKHLKSMHREELEKSG 67 (76)
T ss_dssp CEEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHHHHHHTT
T ss_pred EEECCCCCCccCCCCCCCCchHHHHHHHHHHCHHHHHhcc
Confidence 457999999887 578999999999999885443
No 378
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=36.42 E-value=86 Score=33.28 Aligned_cols=92 Identities=12% Similarity=0.142 Sum_probs=51.3
Q ss_pred HhhcCCHHHHHHHHHHHHhhCCCC------chhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhh----H
Q 037237 59 AFQSGDSKKALEMIKESISSHQDS------PHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVEL----S 128 (1267)
Q Consensus 59 ~~~~Gnh~kAL~~~kd~~~~h~~s------~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~----a 128 (1267)
....|++.+|++..++.+...+.. +.++..-|.++..+ .+. +--..|+.-|..-....|+...+ -
T Consensus 125 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~----~~~-~~A~~~~~kal~~~~~~~~~~~~~~~~~ 199 (293)
T 2qfc_A 125 VLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAEN----GYL-KKGIDLFEQILKQLEALHDNEEFDVKVR 199 (293)
T ss_dssp HHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHT----TCH-HHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHc----CCH-HHHHHHHHHHHHHHHhcCccccchHHHH
Confidence 456789999999999998654322 22444444444443 232 22233333322122445554322 2
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHHhccC
Q 037237 129 FLHAALLYKLAEINDKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 129 ~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~ 160 (1267)
.-.|..++.++ .|++|+.-.++|+.+.
T Consensus 200 ~nlg~~y~~~~-----~y~~Al~~~~kal~~~ 226 (293)
T 2qfc_A 200 YNHAKALYLDS-----RYEESLYQVNKAIEIS 226 (293)
T ss_dssp HHHHHHHHHTT-----CHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHh-----hHHHHHHHHHHHHHHH
Confidence 23344444433 5899999999999884
No 379
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=35.93 E-value=16 Score=31.67 Aligned_cols=22 Identities=14% Similarity=0.285 Sum_probs=20.1
Q ss_pred eeecCccccccCChHHHHHHhH
Q 037237 329 FSECFVCVEKIGNPQLCEKHFR 350 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~ 350 (1267)
-+.|+.|++.|.....+..|+.
T Consensus 65 ~~~C~~C~~~f~~~~~l~~H~~ 86 (89)
T 2wbs_A 65 PFQCQKCDRAFSRSDHLALHMK 86 (89)
T ss_dssp CEECSSSSCEESSHHHHHHHGG
T ss_pred CccCCCCCcccCCHHHHHHHHH
Confidence 3789999999999999999986
No 380
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=35.91 E-value=18 Score=33.23 Aligned_cols=26 Identities=15% Similarity=0.272 Sum_probs=22.9
Q ss_pred eecCccccccCChHHHHHHhHhhhcc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
..|..|++.|.....|..|+..-|.+
T Consensus 63 ~~C~~Cgk~F~~~~~L~~H~~~~H~~ 88 (96)
T 2ctd_A 63 FTCHHCGKQLRSLAGMKYHVMANHNS 88 (96)
T ss_dssp CCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred eECCCCCCeeCCHHHHHHHhHHhcCC
Confidence 57999999999999999996678865
No 381
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=35.66 E-value=16 Score=32.33 Aligned_cols=23 Identities=22% Similarity=0.391 Sum_probs=20.2
Q ss_pred eeecCccccccCChHHHHHHhHh
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRS 351 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~ 351 (1267)
-+.|+.|++.|.+...+..|+..
T Consensus 8 ~~~C~~C~~~f~~~~~l~~H~~~ 30 (96)
T 2dmd_A 8 PHKCEVCGKCFSRKDKLKTHMRC 30 (96)
T ss_dssp CCCBTTTTBCCCCHHHHHHHGGG
T ss_pred CeECCCCCCccCCHHHHHHHHHh
Confidence 36799999999999999999874
No 382
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.48 E-value=15 Score=33.31 Aligned_cols=26 Identities=15% Similarity=0.124 Sum_probs=22.2
Q ss_pred eeeecCccccccC-ChHHHHHHhHhhh
Q 037237 328 KFSECFVCVEKIG-NPQLCEKHFRSSH 353 (1267)
Q Consensus 328 rfW~C~~C~~kF~-d~~~~~~H~~~eH 353 (1267)
+-+.|+.|++.|. ....|+.|+..-|
T Consensus 23 ~~~~C~~C~k~f~~~~~~L~~H~~~h~ 49 (98)
T 2gqj_A 23 GEAVCPTCNVVTRKTLVGLKKHMEVCQ 49 (98)
T ss_dssp SCCCCTTTCCCCSSCSHHHHHHHHHHH
T ss_pred CCcCCCCCCCChhhhHHHHHHHHHHHc
Confidence 4478999999999 9999999997533
No 383
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=35.26 E-value=17 Score=32.34 Aligned_cols=22 Identities=18% Similarity=0.341 Sum_probs=20.1
Q ss_pred eeecCccccccCChHHHHHHhH
Q 037237 329 FSECFVCVEKIGNPQLCEKHFR 350 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~ 350 (1267)
-+.|+.|++.|.....+..|+.
T Consensus 75 ~~~C~~C~~~f~~~~~l~~H~~ 96 (100)
T 2ebt_A 75 PFQCGVCNRSFSRSDHLALHMK 96 (100)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHH
T ss_pred CeECCCCcCccCCHHHHHHHHH
Confidence 3789999999999999999986
No 384
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=35.08 E-value=22 Score=26.58 Aligned_cols=22 Identities=14% Similarity=0.134 Sum_probs=20.3
Q ss_pred eecCccccccCChHHHHHHhHh
Q 037237 330 SECFVCVEKIGNPQLCEKHFRS 351 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~ 351 (1267)
..||+|.....|...++.|+++
T Consensus 4 ~~CpvCk~q~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 4 FCCPKCQYQAPDMDTLQIHVME 25 (28)
T ss_dssp EECTTSSCEESSHHHHHHHHHH
T ss_pred ccCccccccCcChHHHHHHHHH
Confidence 5799999999999999999985
No 385
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=34.77 E-value=32 Score=39.85 Aligned_cols=100 Identities=14% Similarity=0.031 Sum_probs=51.6
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHH
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHA 132 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A 132 (1267)
...|..++++||+.+|++..+.++.. +.+.+++.-|.+++... ...|. +-- +.-+++|+...| ......+
T Consensus 7 ~~la~~~~~~g~~~~A~~~~~~aa~~--g~~~A~~~Lg~~y~~~g-~~~d~-~~A---~~~~~~A~~~~~---~A~~~Lg 76 (452)
T 3e4b_A 7 QRLANEALKRGDTVTAQQNYQQLAEL--GYSEAQVGLADIQVGTR-DPAQI-KQA---EATYRAAADTSP---RAQARLG 76 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH--TCCTGGGTCC------------------------------------CHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHccC-CCCCH-HHH---HHHHHHHHhCCH---HHHHHHH
Confidence 44688899999999999999999754 56778888999997633 22222 111 223455665533 3333445
Q ss_pred HHHHHHHhhhchhHHHHHHHHHHHhccCCC
Q 037237 133 ALLYKLAEINDKEWDVVIEACERMLKIGDP 162 (1267)
Q Consensus 133 ~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P 162 (1267)
.+++..+.-....|++|+.--++|+...+|
T Consensus 77 ~~~~~~~~~~~~~~~~A~~~~~~Aa~~g~~ 106 (452)
T 3e4b_A 77 RLLAAKPGATEAEHHEAESLLKKAFANGEG 106 (452)
T ss_dssp HHHHTC--CCHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHhCCCCCCcCHHHHHHHHHHHHHCCCH
Confidence 545544422124789999999999885444
No 386
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.05 E-value=16 Score=32.41 Aligned_cols=26 Identities=19% Similarity=0.144 Sum_probs=22.7
Q ss_pred eecCccccccCChHHHHHHhHhhhccc
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+.|+.|++.|.....|..|+. -|.+.
T Consensus 63 ~~C~~C~k~f~~~~~L~~H~~-~H~~~ 88 (95)
T 2ej4_A 63 EECPREGKSFKAKYKLVNHIR-VHTGE 88 (95)
T ss_dssp TTCSSTTCCCSSHHHHHHHHH-HHHTC
T ss_pred cCCCCCCcccCCHHHHHHHHH-hcCCC
Confidence 689999999999999999998 47653
No 387
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=33.98 E-value=17 Score=35.88 Aligned_cols=28 Identities=14% Similarity=0.347 Sum_probs=25.3
Q ss_pred eecCccccccCChHHHHHHhHhhhcccC
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNHL 357 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~l 357 (1267)
-+|=+|.+.|.++++++.|+..+|-=+|
T Consensus 16 ~~CLFCd~~~~s~~~~l~H~k~~H~FD~ 43 (121)
T 1wir_A 16 TPCLFCDRLFASAEETFSHCKLEHQFNI 43 (121)
T ss_dssp EECSSSCCEESSHHHHHHHHHHSSCCCH
T ss_pred eeEecCCCcccCHHHHHHHHHHhcCCCH
Confidence 4788999999999999999999997665
No 388
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=33.49 E-value=21 Score=32.20 Aligned_cols=29 Identities=17% Similarity=0.162 Sum_probs=21.1
Q ss_pred eeeecCccccccCChHHHHHHhHhhhcccC
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSHWNHL 357 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH~~~l 357 (1267)
+-+.|+.|++.|.....|..|+. -|.+.-
T Consensus 72 ~~~~C~~C~~~f~~~~~L~~H~~-~H~~~~ 100 (106)
T 2ee8_A 72 KPFKCQECGKGFCQSRTLAVHKT-LHMQTS 100 (106)
T ss_dssp CTTSCSSSCCCCSSHHHHHHHHH-HTTSCC
T ss_pred CCeECCCcCCcccCHHHHHHHHH-HhCCCC
Confidence 34678888888888888888875 555543
No 389
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=33.14 E-value=21 Score=31.04 Aligned_cols=26 Identities=19% Similarity=0.469 Sum_probs=22.3
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|+.|++.|.....+..|+. .|.+
T Consensus 34 ~~~C~~C~~~f~~~~~l~~H~~-~h~~ 59 (90)
T 1a1h_A 34 PFQCRICMRNFSRSDHLTTHIR-THTG 59 (90)
T ss_dssp CEECTTTCCEESCHHHHHHHHH-HHHC
T ss_pred CccCCCCCcccCCHHHHHHHHH-HcCC
Confidence 3789999999999999999997 4543
No 390
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=32.49 E-value=6.4 Score=45.62 Aligned_cols=48 Identities=17% Similarity=0.244 Sum_probs=25.7
Q ss_pred eeeeecCccccccCC----hHHHHHHhHhhhcccCcccccCCCCccccHHHHHhhhcCCccccchh
Q 037237 327 WKFSECFVCVEKIGN----PQLCEKHFRSSHWNHLEIMVQPLMPVDFRSEWIEMIVKGVWKPVDTD 388 (1267)
Q Consensus 327 WrfW~C~~C~~kF~d----~~~~~~H~~~eH~~~l~p~~~~~~Pq~i~~~w~~~i~~~~WkPvD~~ 388 (1267)
..-|.||+|++.+.- .+.+...+.. -+|..+++ ++.-..|+|+|++-.
T Consensus 286 ~~~W~CPIC~k~~~~~dL~ID~~~~~IL~------------~~~~dve~--V~v~~DGsW~p~~e~ 337 (371)
T 3i2d_A 286 IPTWQCPVCQIDIALENLAISEFVDDILQ------------NCQKNVEQ--VELTSDGKWTAILED 337 (371)
T ss_dssp SCCCBCTTTCCBCCGGGEEEBHHHHHHHT------------TSCTTCCE--EEEETTSCEEECC--
T ss_pred CCceeCCCCCcccCHHHeeEcHHHHHHHH------------hccCCccE--EEECCCCCEEeccCC
Confidence 467889999876542 2333333332 22333322 222356999999877
No 391
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=32.31 E-value=23 Score=33.35 Aligned_cols=24 Identities=21% Similarity=0.411 Sum_probs=16.0
Q ss_pred eecCccccccCChHHHHHHhHhhh
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSH 353 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH 353 (1267)
+.|+.|++.|.....+..|+..-|
T Consensus 101 ~~C~~C~k~f~~~~~l~~H~~~h~ 124 (129)
T 2wbt_A 101 KVCPVCKKEFTSTDSALDHVCKKH 124 (129)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHHTT
T ss_pred CCCCCCCcccCCHHHHHHHHHHHC
Confidence 467777777777777777766444
No 392
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=31.97 E-value=62 Score=36.55 Aligned_cols=99 Identities=12% Similarity=0.029 Sum_probs=56.5
Q ss_pred HHHHHHHHHhHhhcCCHHHHHHHHHHHHhhCC------CCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCC
Q 037237 49 INNEGLRALSAFQSGDSKKALEMIKESISSHQ------DSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFP 122 (1267)
Q Consensus 49 i~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~------~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p 122 (1267)
+..-...|.-+++.|+..+|.++++++...+| .+.++...+|.|.+.... ++. +-.| ..+..+...+|
T Consensus 136 lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~--~~~---q~A~-~~f~El~~~~p 209 (310)
T 3mv2_B 136 TELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNK--ETA---TSNF-YYYEELSQTFP 209 (310)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTC--STT---THHH-HHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCC--ccH---HHHH-HHHHHHHHhCC
Confidence 33334455566677778888888888777777 566777777766655532 222 1121 22344678888
Q ss_pred chhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 123 NLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 123 ~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
+.-....+++ +...+|+ |++|.+.-++.++.
T Consensus 210 ~~~~~~lLln-~~~~~g~-----~~eAe~~L~~l~~~ 240 (310)
T 3mv2_B 210 TWKTQLGLLN-LHLQQRN-----IAEAQGIVELLLSD 240 (310)
T ss_dssp SHHHHHHHHH-HHHHHTC-----HHHHHHHHHHHHSH
T ss_pred CcccHHHHHH-HHHHcCC-----HHHHHHHHHHHHHh
Confidence 7222222333 3344443 78888877755554
No 393
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=31.72 E-value=20 Score=30.68 Aligned_cols=27 Identities=22% Similarity=0.327 Sum_probs=22.8
Q ss_pred eeeecCccccccCChHHHHHHhHhhhcc
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+=+.|+.|++.|.....+..|+.. |.+
T Consensus 17 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~ 43 (77)
T 2cot_A 17 RRYKCDECGKSFSHSSDLSKHRRT-HTG 43 (77)
T ss_dssp CSSBCSSSCCBCSCHHHHHHHHTT-TCC
T ss_pred CCEECCCCCcccCCHHHHHHHHHH-cCC
Confidence 346899999999999999999974 544
No 394
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=31.71 E-value=1.1e+02 Score=33.09 Aligned_cols=98 Identities=11% Similarity=0.012 Sum_probs=57.9
Q ss_pred HHHHHHHHhHhhcCCHHHHHHHHHHHHhhCC--------CCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccC
Q 037237 50 NNEGLRALSAFQSGDSKKALEMIKESISSHQ--------DSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRF 121 (1267)
Q Consensus 50 ~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~--------~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~ 121 (1267)
..-+..|.-.+..|++.+|++..++.+...+ ..+.++..-|.+++.+ .+. +--..+ +.+|+.+.
T Consensus 94 ~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~----g~~-~~A~~~---~~~al~~~ 165 (373)
T 1hz4_A 94 WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAW----ARL-DEAEAS---ARSGIEVL 165 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHT----TCH-HHHHHH---HHHHHHHT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHh----cCH-HHHHHH---HHHHHHHh
Confidence 3345567778889999999999999886542 1233444455555443 233 222233 34455555
Q ss_pred Cch-----hhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccC
Q 037237 122 PNL-----VELSFLHAALLYKLAEINDKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 122 p~s-----~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~ 160 (1267)
|.. +......|.++...| .|++|..-.++++.+.
T Consensus 166 ~~~~~~~~~~~~~~la~~~~~~g-----~~~~A~~~l~~a~~~~ 204 (373)
T 1hz4_A 166 SSYQPQQQLQCLAMLIQCSLARG-----DLDNARSQLNRLENLL 204 (373)
T ss_dssp TTSCGGGGHHHHHHHHHHHHHHT-----CHHHHHHHHHHHHHHH
T ss_pred hccCcHHHHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHHH
Confidence 542 112223455555544 4799999999998873
No 395
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=31.10 E-value=23 Score=32.68 Aligned_cols=27 Identities=26% Similarity=0.342 Sum_probs=22.7
Q ss_pred eeeecCccccccCChHHHHHHhHhhhcc
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+-+.|+.|++.|.....+..|+.. |.+
T Consensus 65 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~ 91 (124)
T 2dlq_A 65 QVFTCSVCQETFRRRMELRLHMVS-HTG 91 (124)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHH-HSS
T ss_pred CCeECCCCCCccCCHHHHHHHHHH-cCC
Confidence 447899999999999999999974 543
No 396
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=31.07 E-value=22 Score=34.43 Aligned_cols=28 Identities=11% Similarity=0.011 Sum_probs=24.7
Q ss_pred eecCccccccCChHHHHHHhHhhhcccC
Q 037237 330 SECFVCVEKIGNPQLCEKHFRSSHWNHL 357 (1267)
Q Consensus 330 W~C~~C~~kF~d~~~~~~H~~~eH~~~l 357 (1267)
..|+.|++.|.+...+..|+...|.+.-
T Consensus 26 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~ 53 (155)
T 2rpc_A 26 RPKKSCDRTFSTMHELVTHVTMEHVGGP 53 (155)
T ss_dssp SSCCCCCCCBSSHHHHHHHHHTTTSCCT
T ss_pred cccccCCcccCCHHHHHHHHHhhcCCCc
Confidence 4699999999999999999998897753
No 397
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=30.64 E-value=93 Score=33.00 Aligned_cols=31 Identities=3% Similarity=-0.037 Sum_probs=24.0
Q ss_pred HHHHHHhHhhcCCHHHHHHHHHHHHhhCCCC
Q 037237 52 EGLRALSAFQSGDSKKALEMIKESISSHQDS 82 (1267)
Q Consensus 52 e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s 82 (1267)
=.+.+..++..|++.+|+++++.+....+..
T Consensus 78 l~~~i~~~~~~~~y~~a~~~~~~~l~~~~~~ 108 (293)
T 3u3w_A 78 FKDQVIMLCKQKRYKEIYNKVWNELKKEEYH 108 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhccccCC
Confidence 3356888888999999999988888776543
No 398
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=30.52 E-value=24 Score=34.06 Aligned_cols=25 Identities=16% Similarity=0.234 Sum_probs=0.0
Q ss_pred cCccccccCChHHHHHHhHhhhccc
Q 037237 332 CFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 332 C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
|+.|++.|.+...+..|+...|+..
T Consensus 6 C~~C~~~f~~~~~L~~H~~~~h~h~ 30 (155)
T 2gli_A 6 WDGCSQEFDSQEQLVHHINSEHIHG 30 (155)
T ss_dssp BTTCCCBCSCHHHHHHHHHHHTSSS
T ss_pred cCCCccccCCHHHHHHHHHhhccCC
No 399
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=30.35 E-value=22 Score=34.71 Aligned_cols=27 Identities=26% Similarity=0.437 Sum_probs=24.1
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|+.|++.|.....|..|+..-|..
T Consensus 78 ~~~C~~C~k~F~~~~~L~~H~~~hh~~ 104 (133)
T 2lt7_A 78 RYQCLACGKSFINYQFMSSHIKSVHSQ 104 (133)
T ss_dssp CEEESSSCCEESSHHHHHHHHHHHTCC
T ss_pred cccCCCCCCCcCCHHHHHHHhHHhcCC
Confidence 478999999999999999999988754
No 400
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=29.29 E-value=25 Score=31.73 Aligned_cols=27 Identities=22% Similarity=0.178 Sum_probs=22.6
Q ss_pred eeeecCccccccCChHHHHHHhHhhhcc
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+-+.|+.|++.|.+...+..|+.. |.+
T Consensus 16 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~ 42 (106)
T 2ee8_A 16 KEFICKFCGRHFTKSYNLLIHERT-HTD 42 (106)
T ss_dssp CCCBCSSSCCBCSSHHHHHHHHHH-HCC
T ss_pred cCeECCCCCCccCCHHHHHHHHHH-cCC
Confidence 457899999999999999999974 543
No 401
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=29.28 E-value=1.6e+02 Score=26.72 Aligned_cols=75 Identities=7% Similarity=-0.047 Sum_probs=52.9
Q ss_pred CCchhHHHHHHHHHhHhhcCC---HHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhcc
Q 037237 44 SSDPEINNEGLRALSAFQSGD---SKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGR 120 (1267)
Q Consensus 44 ~~~~~i~~e~~~a~~~~~~Gn---h~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l 120 (1267)
+.++.+...-..|+- + .|+ ..+|..+++..+...|+++.+..+-|.++++.. +. .-- +....+....
T Consensus 3 p~~~~~~~~~a~al~-~-~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g----~y-~~A---i~~w~~~l~~ 72 (93)
T 3bee_A 3 AVTATQLAAKATTLY-Y-LHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISF----RF-QEA---IDTWVLLLDS 72 (93)
T ss_dssp CCCHHHHHHHHHHHH-H-TTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CH-HHH---HHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHH-H-hcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcC----CH-HHH---HHHHHHHHhh
Confidence 445677776666662 3 333 689999999999999999999999999998754 32 222 3334557777
Q ss_pred CCchhhhH
Q 037237 121 FPNLVELS 128 (1267)
Q Consensus 121 ~p~s~~~a 128 (1267)
.|.++...
T Consensus 73 ~p~~~~~~ 80 (93)
T 3bee_A 73 NDPNLDRV 80 (93)
T ss_dssp CCTTCCHH
T ss_pred CCCCccHH
Confidence 77765543
No 402
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=29.22 E-value=31 Score=29.23 Aligned_cols=27 Identities=22% Similarity=0.359 Sum_probs=22.4
Q ss_pred eecCc--cccccCChHHHHHHhHhhhccc
Q 037237 330 SECFV--CVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 330 W~C~~--C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
+.|.. |++.|.....+..|+...|.+.
T Consensus 8 ~~C~~~~C~~~f~~~~~L~~H~~~~H~~~ 36 (79)
T 2dlk_A 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQ 36 (79)
T ss_dssp EECSSTTTCCEESSHHHHHHHHHHGGGSC
T ss_pred ccCCCCCCcCccCCHHHHHHHHHHHhCCC
Confidence 56776 9999999999999998777653
No 403
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=28.78 E-value=22 Score=32.42 Aligned_cols=26 Identities=23% Similarity=0.247 Sum_probs=22.1
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|+.|++.|.....+..|+.. |.+
T Consensus 37 ~~~C~~C~~~f~~~~~l~~H~~~-h~~ 62 (110)
T 2csh_A 37 PYGCGVCGKKFKMKHHLVGHMKI-HTG 62 (110)
T ss_dssp SEECTTTSCEESSSHHHHHHHTT-TCC
T ss_pred CccCCCCCcccCCHHHHHHHHHH-cCC
Confidence 47899999999999999999874 433
No 404
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=28.69 E-value=26 Score=32.16 Aligned_cols=24 Identities=17% Similarity=0.176 Sum_probs=21.3
Q ss_pred eeecCcccccc-CChHHHHHHhHhhh
Q 037237 329 FSECFVCVEKI-GNPQLCEKHFRSSH 353 (1267)
Q Consensus 329 fW~C~~C~~kF-~d~~~~~~H~~~eH 353 (1267)
-..|+.|++.| .....++.|+. .|
T Consensus 34 ~~~C~~C~k~F~~~~~~L~~H~~-~h 58 (96)
T 2ctd_A 34 SVSCPTCQAVGRKTIEGLKKHME-NC 58 (96)
T ss_dssp CEECTTTCSCEESSHHHHHHHHH-HH
T ss_pred CcCCCCCCCCcccCHHHHHHHHH-HH
Confidence 36899999999 99999999987 46
No 405
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=28.43 E-value=87 Score=34.03 Aligned_cols=97 Identities=13% Similarity=0.076 Sum_probs=51.7
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCch------hhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCC----
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPH------LHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFP---- 122 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~------~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p---- 122 (1267)
...+.-.+..|++.+|++.+++.+...+.... ++...|.++..+ .+. +--..+ +++|+.+++
T Consensus 57 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~----G~~-~~A~~~---~~~al~~~~~~~~ 128 (373)
T 1hz4_A 57 SVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQ----GFL-QTAWET---QEKAFQLINEQHL 128 (373)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT----TCH-HHHHHH---HHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHC----CCH-HHHHHH---HHHHHHHHHHhcc
Confidence 34455566778888888777777654432211 122233333222 122 111222 333444432
Q ss_pred ----chhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCC
Q 037237 123 ----NLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKIGDP 162 (1267)
Q Consensus 123 ----~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P 162 (1267)
.........|.+++..|+ |++|...+.+|+.+...
T Consensus 129 ~~~~~~~~~~~~la~~~~~~g~-----~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 129 EQLPMHEFLVRIRAQLLWAWAR-----LDEAEASARSGIEVLSS 167 (373)
T ss_dssp TTSTHHHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHHTTT
T ss_pred ccCcHHHHHHHHHHHHHHHhcC-----HHHHHHHHHHHHHHhhc
Confidence 222233345666666664 89999999999988543
No 406
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=28.25 E-value=1.1e+02 Score=33.74 Aligned_cols=98 Identities=15% Similarity=0.151 Sum_probs=58.0
Q ss_pred HHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCC------chhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhcc---
Q 037237 50 NNEGLRALSAFQSGDSKKALEMIKESISSHQDS------PHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGR--- 120 (1267)
Q Consensus 50 ~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s------~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l--- 120 (1267)
..-..-|.-....|++.+|++..+..+...+.. +.++.--|.++..+. +. +--..| +.+|..+
T Consensus 185 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g----~~-~~A~~~---~~~al~~~~~ 256 (383)
T 3ulq_A 185 QCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQS----QY-EDAIPY---FKRAIAVFEE 256 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT----CH-HHHHHH---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCC----CH-HHHHHH---HHHHHHHHHh
Confidence 334445566777899999999999988654321 233444444444332 32 222233 3445553
Q ss_pred --C-CchhhhHHHHHHHHHHHHhhhchhHHHHHHHHHHHhccC
Q 037237 121 --F-PNLVELSFLHAALLYKLAEINDKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 121 --~-p~s~~~a~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~ 160 (1267)
. |.....-...|.+++.+++ |++|+.-.++|+.+.
T Consensus 257 ~~~~~~~~~~~~~l~~~~~~~g~-----~~~A~~~~~~al~~~ 294 (383)
T 3ulq_A 257 SNILPSLPQAYFLITQIHYKLGK-----IDKAHEYHSKGMAYS 294 (383)
T ss_dssp TTCGGGHHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHHH
T ss_pred hccchhHHHHHHHHHHHHHHCCC-----HHHHHHHHHHHHHHH
Confidence 3 4444444455666666554 799999999998873
No 407
>4ekf_A Adenain; alpha and beta protein (A+B), hydrolase; HET: CSD; 0.98A {Human adenovirus 2} PDB: 1nln_A 1avp_A
Probab=28.10 E-value=44 Score=35.31 Aligned_cols=29 Identities=10% Similarity=0.228 Sum_probs=23.2
Q ss_pred EEEEEEec--CCC-cEEEEEEecCCCcEEEec
Q 037237 1234 ASMVCVSS--DRQ-RYIIFVYNHMLEKYVQSD 1262 (1267)
Q Consensus 1234 ~aVVcH~G--~gG-HYicfvr~~~~g~W~~fD 1262 (1267)
.|+|+-.| .|| |++||+.++...+-|+||
T Consensus 40 ~AIVNTg~retGGvHWiA~Aw~P~s~~~YmFD 71 (204)
T 4ekf_A 40 CAIVNTAGRETGGVHWMAFAWNPRSKTCYLFE 71 (204)
T ss_dssp EEEEESCC----CCCEEEEEEETTTTEEEEEC
T ss_pred eeEEecCCcccCceeEEEeEecCCcceEEEeC
Confidence 56777666 444 999999999999999998
No 408
>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1
Probab=27.97 E-value=22 Score=37.20 Aligned_cols=32 Identities=31% Similarity=0.493 Sum_probs=26.3
Q ss_pred ceeeeecCccccccCChHHHHHHhHhhhcccCcc
Q 037237 326 TWKFSECFVCVEKIGNPQLCEKHFRSSHWNHLEI 359 (1267)
Q Consensus 326 ~WrfW~C~~C~~kF~d~~~~~~H~~~eH~~~l~p 359 (1267)
=|.|..|-.|+ |+.|.+++..||. +|--++..
T Consensus 151 FWQFYKCe~Cg-KYvDId~~~~Hlk-~Hg~~v~e 182 (226)
T 2czr_A 151 FWQFYKCEECG-KYVDIENLEAHLR-EHGIKLHE 182 (226)
T ss_dssp EEEEEECTTTC-CEEEGGGHHHHHH-TTTCCGGG
T ss_pred EEEEEehhhcC-ceecHHHHHHHHH-HcCcchhh
Confidence 49999999998 5899999999998 67665543
No 409
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.50 E-value=27 Score=32.01 Aligned_cols=24 Identities=13% Similarity=0.112 Sum_probs=21.5
Q ss_pred eeeecCccccccCChHHHHHHhHh
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRS 351 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~ 351 (1267)
+-+.|+.|++.|.....+..|+..
T Consensus 18 ~~~~C~~C~k~f~~~~~L~~H~~~ 41 (115)
T 2dmi_A 18 SKFRCKDCSAAYDTLVELTVHMNE 41 (115)
T ss_dssp CSEEBSSSSCEESSHHHHHHHHHH
T ss_pred CCEECCccCchhcCHHHHHHHHHH
Confidence 347899999999999999999985
No 410
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=27.23 E-value=77 Score=34.12 Aligned_cols=101 Identities=10% Similarity=-0.010 Sum_probs=54.2
Q ss_pred HHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHh---CCCcchhhhhhhhhhhhhccCCchhh---
Q 037237 53 GLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKA---GKGTDTQLEHLTTAASAVGRFPNLVE--- 126 (1267)
Q Consensus 53 ~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~---~~~~~~k~~~l~~~~~Av~l~p~s~~--- 126 (1267)
...|.-... |++.+|++..+..+..++.... ....+.++..+|... .+. +-- +..+.+|+.++|+...
T Consensus 120 ~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~-~~~~~~~~~~lg~~~~~~g~~-~~A---~~~~~~al~~~~~~~~~~~ 193 (307)
T 2ifu_A 120 DRAGKLMEP-LDLSKAVHLYQQAAAVFENEER-LRQAAELIGKASRLLVRQQKF-DEA---AASLQKEKSMYKEMENYPT 193 (307)
T ss_dssp HHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHTTCH-HHH---HHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCC-hhHHHHHHHHHHHHHHHcCCH-HHH---HHHHHHHHHHHHHcCChhH
Confidence 344444555 9999999999999876642210 112233344443222 122 111 4445667777765432
Q ss_pred hH-HHHHHHHHHHHhhhchhHHHHHHHHHHHhccCCCCC
Q 037237 127 LS-FLHAALLYKLAEINDKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 127 ~a-~f~A~lL~~la~~~~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
.+ .+.+..+..+. ...|++|+...+++| + +|..
T Consensus 194 ~~~~~~~~g~~~~~---~g~~~~A~~~~~~al-~-~p~~ 227 (307)
T 2ifu_A 194 CYKKCIAQVLVQLH---RADYVAAQKCVRESY-S-IPGF 227 (307)
T ss_dssp HHHHHHHHHHHHHH---TTCHHHHHHHHHHHT-T-STTS
T ss_pred HHHHHHHHHHHHHH---cCCHHHHHHHHHHHh-C-CCCC
Confidence 11 22222222221 125899999999999 4 5653
No 411
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=27.12 E-value=19 Score=38.51 Aligned_cols=32 Identities=22% Similarity=0.375 Sum_probs=26.5
Q ss_pred eecCccccccCC-hHHHHHHhHhhhcccCcccc
Q 037237 330 SECFVCVEKIGN-PQLCEKHFRSSHWNHLEIMV 361 (1267)
Q Consensus 330 W~C~~C~~kF~d-~~~~~~H~~~eH~~~l~p~~ 361 (1267)
..|.+|++.|.+ ...++.|+.++--.-+.|+.
T Consensus 170 L~C~~C~~~f~n~~~~LK~HL~~e~~~~~~~~~ 202 (204)
T 3sp4_A 170 LKCWRCGETFGRHFTKLKAHLQEEYDDWLDKSV 202 (204)
T ss_dssp CBCTTTCCBCTTCHHHHHHHHHHHHHHHHHHHT
T ss_pred ceeCCCCchhhcccHHHHHHHHHHHHHHhcccc
Confidence 379999999987 99999999987766776654
No 412
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=26.83 E-value=29 Score=31.52 Aligned_cols=26 Identities=19% Similarity=0.312 Sum_probs=22.1
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-+.|+.|++.|.....+..|+. |.+.
T Consensus 42 ~~~C~~C~~~f~~~~~l~~H~~--H~~~ 67 (107)
T 1wjp_A 42 AAVCPYCSLRFFSPELKQEHES--KCEY 67 (107)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHH--HCST
T ss_pred CccCCCCCCccCCHHHHHHHHH--cCCC
Confidence 3689999999999999999984 7653
No 413
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=26.62 E-value=30 Score=31.60 Aligned_cols=26 Identities=23% Similarity=0.395 Sum_probs=22.2
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|+.|++.|.....+..|+. .|.+
T Consensus 66 ~~~C~~C~~~f~~~~~l~~H~~-~h~~ 91 (119)
T 2jp9_A 66 PFQCKTCQRKFSRSDHLKTHTR-THTG 91 (119)
T ss_dssp CEECTTTCCEESCHHHHHHHHH-HHHT
T ss_pred CccCCccCchhCCHHHHHHHHH-HhcC
Confidence 3789999999999999999997 4544
No 414
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=26.49 E-value=31 Score=32.48 Aligned_cols=28 Identities=25% Similarity=0.259 Sum_probs=23.6
Q ss_pred eeeecCccccccCChHHHHHHhHhhhcc
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+-..|+.|++.|.....|..|+...|.+
T Consensus 17 kpy~C~~Cgk~F~~~~~L~~H~r~~H~~ 44 (102)
T 2ghf_A 17 GGYECKYCTFQTPDLNMFTFHVDSEHPN 44 (102)
T ss_dssp SSEECSSCSCEESCHHHHHHHHHHHCSS
T ss_pred cCcCCCCCCCccCCHHHHHHHHHhhCCC
Confidence 3468999999999999999999877843
No 415
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=26.48 E-value=1.7e+02 Score=34.12 Aligned_cols=97 Identities=9% Similarity=-0.055 Sum_probs=57.1
Q ss_pred HHhHhhcCCHHHHHHHHHHHHhhCC-CCchhhhhhhHHHHHHHHHhCC---Ccchhhhh----hhhhhhhhccCCchhhh
Q 037237 56 ALSAFQSGDSKKALEMIKESISSHQ-DSPHLHCLEAFIHHSLAEKAGK---GTDTQLEH----LTTAASAVGRFPNLVEL 127 (1267)
Q Consensus 56 a~~~~~~Gnh~kAL~~~kd~~~~h~-~s~~~h~~qg~v~~~lA~~~~~---~~~~k~~~----l~~~~~Av~l~p~s~~~ 127 (1267)
...+...|++.+|+++.+.+.+... .-+.-|...+.+...+|....+ - +-...| |....+ -+=|+++..
T Consensus 294 ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~-~eA~~~~~~~L~i~~~--~lg~~Hp~~ 370 (429)
T 3qwp_A 294 IEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLL-EEALFYGTRTMEPYRI--FFPGSHPVR 370 (429)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCH-HHHHHHHHHHHHHHHH--HSCSSCHHH
T ss_pred HHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccH-HHHHHHHHHHHHhHHH--HcCCCChHH
Confidence 3345578999999999999997763 2344455556666666654422 1 222222 222222 233666666
Q ss_pred HHHH---HHHHHHHHhhhchhHHHHHHHHHHHhccC
Q 037237 128 SFLH---AALLYKLAEINDKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 128 a~f~---A~lL~~la~~~~~~Y~~a~~ec~RaL~i~ 160 (1267)
+.-+ |.++...| .|++|+.--+|||.|.
T Consensus 371 a~~l~nLa~~~~~~g-----~~~eA~~~~~~Al~i~ 401 (429)
T 3qwp_A 371 GVQVMKVGKLQLHQG-----MFPQAMKNLRLAFDIM 401 (429)
T ss_dssp HHHHHHHHHHHHHTT-----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC-----CHHHHHHHHHHHHHHH
Confidence 5533 33333333 4899999999999884
No 416
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=24.71 E-value=23 Score=27.52 Aligned_cols=25 Identities=20% Similarity=0.454 Sum_probs=20.7
Q ss_pred eecC--ccccccCChHHHHHHhHhhhcc
Q 037237 330 SECF--VCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~--~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|. .|++.|.....+..|+.. |.+
T Consensus 19 ~~C~~~~C~k~F~~~~~L~~H~~~-H~~ 45 (47)
T 1ncs_A 19 FECLFPGCTKTFKRRYNIRSHIQT-HLE 45 (47)
T ss_dssp EECCCTTCCCEECSSSSHHHHHHH-HTT
T ss_pred eECCCCCCCCccCCHHHHHHHHHH-ccC
Confidence 6795 699999999999999873 543
No 417
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=24.52 E-value=36 Score=28.53 Aligned_cols=27 Identities=19% Similarity=0.236 Sum_probs=22.9
Q ss_pred eeeecCc--cccccCChHHHHHHhHhhhcc
Q 037237 328 KFSECFV--CVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 328 rfW~C~~--C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+=+.|+. |++.|.....+..|+. -|.+
T Consensus 16 ~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~ 44 (72)
T 2epa_A 16 RSHICSHPGCGKTYFKSSHLKAHTR-THTG 44 (72)
T ss_dssp CCEECSSTTTCCEESSHHHHHHHHH-HHSS
T ss_pred CceeCCCCCCccccCCHHHHHHHHH-hcCC
Confidence 4578988 9999999999999996 4654
No 418
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.58 E-value=37 Score=25.87 Aligned_cols=25 Identities=24% Similarity=0.324 Sum_probs=21.2
Q ss_pred eecC--ccccccCChHHHHHHhHhhhcc
Q 037237 330 SECF--VCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~--~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|. .|++.|.....|..|+.. |.+
T Consensus 13 ~~C~~~~C~k~f~~~~~L~~H~~~-H~~ 39 (48)
T 2ent_A 13 FACTWPGCGWRFSRSDELSRHRRS-HSG 39 (48)
T ss_dssp EECCSSSCCCEESSHHHHHHHHTT-SCC
T ss_pred eECCCCCCCCccCCHHHHHHHHHH-hCC
Confidence 5797 899999999999999864 654
No 419
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=23.53 E-value=32 Score=32.33 Aligned_cols=28 Identities=14% Similarity=0.029 Sum_probs=23.9
Q ss_pred eeecCccccccCChHHHHHHhHhhhccc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWNH 356 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~~ 356 (1267)
-..|..|++.|.....|..|+..-|.+.
T Consensus 50 pf~C~~Cgk~F~~~~~L~~H~~r~Htge 77 (102)
T 2ghf_A 50 SYVCVECNFLTKRYDALSEHNLKYHPGE 77 (102)
T ss_dssp CEEETTTTEEESSTHHHHTHHHHTSTTC
T ss_pred CcCCCCCCcccCCHHHHHHHHHHhcCCC
Confidence 3689999999999999999966678764
No 420
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=23.47 E-value=37 Score=30.87 Aligned_cols=26 Identities=19% Similarity=0.308 Sum_probs=22.5
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-..|+.|++.|.....+..|+. -|.+
T Consensus 25 py~C~~C~k~F~~~~~L~~H~~-~Ht~ 50 (88)
T 1x6f_A 25 TYQCKHCDSKLQSTAELTSHLN-IHNE 50 (88)
T ss_dssp CEECSSSCCEESSHHHHHHHHH-HHHH
T ss_pred CCcCCCCCCEeCCHHHHHHHHH-HhCC
Confidence 4789999999999999999987 4654
No 421
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=23.17 E-value=40 Score=28.25 Aligned_cols=27 Identities=19% Similarity=0.366 Sum_probs=22.1
Q ss_pred eeeecC--ccccccCChHHHHHHhHhhhcc
Q 037237 328 KFSECF--VCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 328 rfW~C~--~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+-+.|+ .|++.|.....+..|+. -|.+
T Consensus 18 ~~~~C~~~~C~k~f~~~~~l~~H~~-~h~~ 46 (73)
T 1f2i_G 18 RPYACPVESCDRRFSRSDELTRHIR-IHTG 46 (73)
T ss_dssp CCEECSSTTBCCEESSHHHHHHHHH-HHHC
T ss_pred CccCCcCCCCCCccCCHHHHHHHHH-hhCC
Confidence 347898 49999999999999986 4554
No 422
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=23.03 E-value=88 Score=31.39 Aligned_cols=50 Identities=10% Similarity=0.279 Sum_probs=39.3
Q ss_pred HHHHHH--HHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHH
Q 037237 49 INNEGL--RALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAE 98 (1267)
Q Consensus 49 i~~e~~--~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~ 98 (1267)
-+.||- -|+..++-||+.+|++.++.+....|+...+..++..|.-++++
T Consensus 76 ~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~Ie~ki~k 127 (134)
T 3o48_A 76 RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVEDKIQK 127 (134)
T ss_dssp GHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHh
Confidence 355553 57888888999999988888887778888888888888777764
No 423
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=22.83 E-value=38 Score=31.31 Aligned_cols=26 Identities=15% Similarity=0.219 Sum_probs=22.3
Q ss_pred eeecCccccccCChHHHHHHhHhhhcc
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
-+.|+.|++.|.+...+..|+. .|.+
T Consensus 34 ~~~C~~C~~~f~~~~~l~~H~~-~h~~ 59 (124)
T 1ubd_C 34 VHVCAECGKAFVESSKLKRHQL-VHTG 59 (124)
T ss_dssp CEECTTTCCEESSHHHHHHHGG-GTSC
T ss_pred CeECCCCCchhCCHHHHHHHHH-HcCC
Confidence 4789999999999999999987 4543
No 424
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=22.80 E-value=36 Score=30.51 Aligned_cols=20 Identities=25% Similarity=0.310 Sum_probs=17.1
Q ss_pred eeeecCccccccCChHHHHH
Q 037237 328 KFSECFVCVEKIGNPQLCEK 347 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~ 347 (1267)
..|.|+.|++.+.+++..+.
T Consensus 35 p~~~C~~CGE~~~~~e~~~~ 54 (78)
T 3ga8_A 35 HGLYCVHCEESIMNKEESDA 54 (78)
T ss_dssp EEEEETTTCCEECCHHHHHH
T ss_pred eeEECCCCCCEEECHHHHHH
Confidence 58999999999999886654
No 425
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=22.73 E-value=39 Score=28.73 Aligned_cols=23 Identities=22% Similarity=0.127 Sum_probs=15.2
Q ss_pred eecCc---cccccCChHHHHHHhHhh
Q 037237 330 SECFV---CVEKIGNPQLCEKHFRSS 352 (1267)
Q Consensus 330 W~C~~---C~~kF~d~~~~~~H~~~e 352 (1267)
+.|+. |++.|.....+..|+..-
T Consensus 59 ~~C~~~~~C~~~f~~~~~l~~H~~~h 84 (85)
T 2j7j_A 59 YPCKKDDSCSFVGKTWTLYLKHVAEC 84 (85)
T ss_dssp EECCSCSSCCCEESSHHHHHHHHHHC
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHhc
Confidence 55666 777777777777776543
No 426
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=21.67 E-value=1.1e+02 Score=31.09 Aligned_cols=49 Identities=10% Similarity=0.301 Sum_probs=40.4
Q ss_pred HHHHH--HHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHH
Q 037237 50 NNEGL--RALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAE 98 (1267)
Q Consensus 50 ~~e~~--~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~ 98 (1267)
+.||- -|+..++-|||.+|++.++.+....|+...+..++..|.-+.++
T Consensus 76 ~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~Ie~~i~k 126 (144)
T 1y8m_A 76 RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVEDKIQK 126 (144)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 55553 58888999999999999999998889888888888888777654
No 427
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=21.63 E-value=3.1e+02 Score=26.51 Aligned_cols=84 Identities=15% Similarity=0.103 Sum_probs=59.9
Q ss_pred HHHHHHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHH
Q 037237 50 NNEGLRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSF 129 (1267)
Q Consensus 50 ~~e~~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~ 129 (1267)
|+-+-.|+++.+.||+.+|-+.|++.- ..-.-+|..|-.+.-+-|....-+.++=..|..- -.
T Consensus 23 rs~~~eAl~~Ak~gdfe~A~~~l~eA~---~~l~~AH~~QT~Liq~Ea~g~~~~~slLlvHAQD--------------hL 85 (109)
T 3k1s_A 23 RSFAMEALQFAKQGKMAEADEAMVKAK---EAINEAHHFQTELIQSEARGEKTEISVLLIHAQD--------------HL 85 (109)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHH--------------HH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhCCCCCCCCeeehhHHH--------------HH
Confidence 677889999999999999999999885 3346789999999888887644343444444221 11
Q ss_pred HHHHHHHHHHhhhchhHHHHH
Q 037237 130 LHAALLYKLAEINDKEWDVVI 150 (1267)
Q Consensus 130 f~A~lL~~la~~~~~~Y~~a~ 150 (1267)
.-|.++..|+..+-.-|++.-
T Consensus 86 Mta~~~~~la~e~I~lyk~~~ 106 (109)
T 3k1s_A 86 MNAITVKELAAEFIDLYKKLE 106 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 446677777777666676653
No 428
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=21.52 E-value=1.5e+02 Score=33.95 Aligned_cols=94 Identities=11% Similarity=0.189 Sum_probs=68.8
Q ss_pred CHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCCchhhhHHHHHHHHHHHHhhh-
Q 037237 64 DSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFPNLVELSFLHAALLYKLAEIN- 142 (1267)
Q Consensus 64 nh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p~s~~~a~f~A~lL~~la~~~- 142 (1267)
++.+||+....++..+|.+..+-.-.|.+...+.. .++ +-- |....++.+..|+....=..+.-++-.++..-
T Consensus 104 ~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~--~~~-~~E---L~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~ 177 (349)
T 3q7a_A 104 SLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISP--QDP-VSE---IEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGR 177 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCC--SCC-HHH---HHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcC--CCh-HHH---HHHHHHHHHhCCCCHHHHHHHHHHHHHhccccc
Confidence 69999999999999999999998888988887722 133 212 55567799999998876666666666666420
Q ss_pred --chhHHHHHHHHHHHhccCCCCC
Q 037237 143 --DKEWDVVIEACERMLKIGDPYD 164 (1267)
Q Consensus 143 --~~~Y~~a~~ec~RaL~i~~P~d 164 (1267)
...+.+++.-|.+++.+ +|.+
T Consensus 178 ~~~~~~~eELe~~~k~I~~-dp~N 200 (349)
T 3q7a_A 178 ISEAQWGSELDWCNEMLRV-DGRN 200 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHH-CTTC
T ss_pred cchhhHHHHHHHHHHHHHh-CCCC
Confidence 01344889999999987 4554
No 429
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.46 E-value=39 Score=28.05 Aligned_cols=23 Identities=13% Similarity=0.267 Sum_probs=19.8
Q ss_pred eeeecCccccccCChHHHHHHhHh
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRS 351 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~ 351 (1267)
+=..|+.|++.|. ...+..|+..
T Consensus 9 ~~~~C~~C~k~f~-~~~L~~H~~~ 31 (66)
T 2eod_A 9 RTQPCTYCTKEFV-FDTIQSHQYQ 31 (66)
T ss_dssp CEEECSSSCCEEE-HHHHHHHHHH
T ss_pred CCeeccccCCccC-HHHHHHHHHH
Confidence 4468999999999 9999999875
No 430
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=21.11 E-value=47 Score=28.21 Aligned_cols=25 Identities=24% Similarity=0.440 Sum_probs=21.8
Q ss_pred eecCc--cccccCChHHHHHHhHhhhcc
Q 037237 330 SECFV--CVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 330 W~C~~--C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+.|+. |++.|.....+..|+.. |.+
T Consensus 32 ~~C~~~~C~~~f~~~~~l~~H~~~-h~~ 58 (85)
T 2j7j_A 32 YECPHEGCDKRFSLPSRLKRHEKV-HAG 58 (85)
T ss_dssp EECCSTTCCCEESSHHHHHHHHHH-HHS
T ss_pred eeCCCCCCcCccCCHHHHHHHHHH-hCC
Confidence 78988 99999999999999964 544
No 431
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=21.09 E-value=1.7e+02 Score=34.31 Aligned_cols=98 Identities=9% Similarity=-0.069 Sum_probs=56.3
Q ss_pred HHhHhhcCCHHHHHHHHHHHHhhCC-CCchhhhhhhHHHHHHHHHhCCCc--chhhhh----hhhhhhhhccCCchhhhH
Q 037237 56 ALSAFQSGDSKKALEMIKESISSHQ-DSPHLHCLEAFIHHSLAEKAGKGT--DTQLEH----LTTAASAVGRFPNLVELS 128 (1267)
Q Consensus 56 a~~~~~~Gnh~kAL~~~kd~~~~h~-~s~~~h~~qg~v~~~lA~~~~~~~--~~k~~~----l~~~~~Av~l~p~s~~~a 128 (1267)
..+.-.-|++.+|+.+.+++.+... .-+.-|-.-+.++..+|....+.- +-...| |.... ..+=|+++..|
T Consensus 305 ~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~--~~lG~~Hp~~a 382 (433)
T 3qww_A 305 FRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYS--KHYPVYSLNVA 382 (433)
T ss_dssp HHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH--HHSCSSCHHHH
T ss_pred HHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH--HHcCCCChHHH
Confidence 3333346899999999999987763 234445555566666665543210 111122 22222 12446666665
Q ss_pred HHH---HHHHHHHHhhhchhHHHHHHHHHHHhccC
Q 037237 129 FLH---AALLYKLAEINDKEWDVVIEACERMLKIG 160 (1267)
Q Consensus 129 ~f~---A~lL~~la~~~~~~Y~~a~~ec~RaL~i~ 160 (1267)
.-+ |.+++..| .|++|+.--+|||.|.
T Consensus 383 ~~l~nLa~~~~~qg-----~~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 383 SMWLKLGRLYMGLE-----NKAAGEKALKKAIAIM 412 (433)
T ss_dssp HHHHHHHHHHHHTT-----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcc-----CHHHHHHHHHHHHHHH
Confidence 543 33333333 4899999999999984
No 432
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=21.01 E-value=42 Score=31.47 Aligned_cols=24 Identities=17% Similarity=0.317 Sum_probs=21.6
Q ss_pred eeecCccccccCChHHHHHHhHhhh
Q 037237 329 FSECFVCVEKIGNPQLCEKHFRSSH 353 (1267)
Q Consensus 329 fW~C~~C~~kF~d~~~~~~H~~~eH 353 (1267)
=+.|+.|++.|.....+..|+.. |
T Consensus 74 ~~~C~~C~k~f~~~~~l~~H~~~-H 97 (129)
T 2wbt_A 74 QFVCPLCLMPFSSSVSLKQHIRY-T 97 (129)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-T
T ss_pred CeECCCCCcccCCHhHHHHHHHH-C
Confidence 36899999999999999999975 5
No 433
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=20.42 E-value=46 Score=32.38 Aligned_cols=27 Identities=22% Similarity=0.335 Sum_probs=21.8
Q ss_pred eeeecCccccccCChHHHHHHhHhhhcc
Q 037237 328 KFSECFVCVEKIGNPQLCEKHFRSSHWN 355 (1267)
Q Consensus 328 rfW~C~~C~~kF~d~~~~~~H~~~eH~~ 355 (1267)
+-..|+.|++.|.....|..|+. -|.+
T Consensus 21 k~y~C~~C~k~F~~~~~L~~H~~-~H~~ 47 (133)
T 2lt7_A 21 VYYICIVCKRSYVCLTSLRRHFN-IHSW 47 (133)
T ss_dssp EEEEETTTCCEESCHHHHHHHHH-HHHC
T ss_pred cCeECCCCCCCcCCHHHHHHHHH-HcCC
Confidence 55689999999999999999986 5754
No 434
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=20.14 E-value=1e+02 Score=34.85 Aligned_cols=90 Identities=17% Similarity=0.139 Sum_probs=65.0
Q ss_pred HHHHhHhhcCCHHHHHHHHHHHHhhCCCCchhhhhhhHHHHHHHHHhCCCcchhhhhhhhhhhhhccCC--chhhhHHHH
Q 037237 54 LRALSAFQSGDSKKALEMIKESISSHQDSPHLHCLEAFIHHSLAEKAGKGTDTQLEHLTTAASAVGRFP--NLVELSFLH 131 (1267)
Q Consensus 54 ~~a~~~~~~Gnh~kAL~~~kd~~~~h~~s~~~h~~qg~v~~~lA~~~~~~~~~k~~~l~~~~~Av~l~p--~s~~~a~f~ 131 (1267)
-+++..+-+++ |+..++++++..+.+...+.+-|+++.... +. +-- |..+.+.++..| ++++.-.+.
T Consensus 74 ~~~la~~~~~~---a~~~l~~l~~~~~~~~~~~~~la~i~~~~g----~~-eeA---L~~l~~~i~~~~~~~~lea~~l~ 142 (310)
T 3mv2_B 74 LDLYVQFLDTK---NIEELENLLKDKQNSPYELYLLATAQAILG----DL-DKS---LETCVEGIDNDEAEGTTELLLLA 142 (310)
T ss_dssp HHHHHHHHTTT---CCHHHHHTTTTSCCCHHHHHHHHHHHHHHT----CH-HHH---HHHHHHHHTSSCSTTHHHHHHHH
T ss_pred HHHHHHHhccc---HHHHHHHHHhcCCCCcHHHHHHHHHHHHcC----CH-HHH---HHHHHHHhccCCCcCcHHHHHHH
Confidence 34555555555 889999999776666777778888887742 33 222 333455667776 899999999
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHhcc
Q 037237 132 AALLYKLAEINDKEWDVVIEACERMLKI 159 (1267)
Q Consensus 132 A~lL~~la~~~~~~Y~~a~~ec~RaL~i 159 (1267)
+.++..++. ++.|.+..+++..+
T Consensus 143 vqi~L~~~r-----~d~A~k~l~~~~~~ 165 (310)
T 3mv2_B 143 IEVALLNNN-----VSTASTIFDNYTNA 165 (310)
T ss_dssp HHHHHHTTC-----HHHHHHHHHHHHHH
T ss_pred HHHHHHCCC-----HHHHHHHHHHHHhc
Confidence 999998886 68888888887776
No 435
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=20.02 E-value=82 Score=32.51 Aligned_cols=30 Identities=20% Similarity=0.263 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHhcCce---eeeecCccccccC
Q 037237 311 EKIFSEALSFAEEHKTW---KFSECFVCVEKIG 340 (1267)
Q Consensus 311 ~~~Ls~al~fak~~~~W---rfW~C~~C~~kF~ 340 (1267)
.+.+..+|.-.+.++-+ .+|+|++||-.+.
T Consensus 117 ~~~~~~~l~~l~~~~~~~~~~~~~C~~CG~i~~ 149 (170)
T 3pwf_A 117 AELYRKAKEKAEKGEDIEIKKVYICPICGYTAV 149 (170)
T ss_dssp HHHHHHHHHHHTTTCCCCCSCEEECTTTCCEEE
T ss_pred HHHHHHHHHHHhcCCcCCCCCeeEeCCCCCeeC
Confidence 35577777777777766 5999999997664
Done!