Your job contains 1 sequence.
>037241
MPEDEGGGGGGEGGLLHEGFFMENPAWAPLVSDTTLAPPQPSSSKIPKLNKKQETSQGSS
KKRARGEGGGEVGKDGNLLKGSDDKKAVKVKEGESEHEIHIWTERERRKKMRNMFANLHS
LLPQLPPKADKSSIVDEAVSYIKTLQQTLRKLQKQKLERLQGVASFGFEASAAITPQNKL
AIVAHDHQQGSSSNLLGANSTDATNNSSNLLSVSPTYPVIFQTWTSSNVVLNICGDEAHI
SICSPKKPGMFSTICYVLEKHKIEVISAQVSSDLTRRMYMIQVHVNGASDQFSEALPVEE
MYKQAA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 037241
(306 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2012146 - symbol:RGE1 "AT1G49770" species:3702... 374 1.7e-34 1
UNIPROTKB|Q6YYG9 - symbol:OSJNBa0051E21.18 "Putative unch... 176 1.6e-23 2
UNIPROTKB|Q6YYG5 - symbol:OSJNBa0051E21.28 "Putative unch... 109 1.6e-08 2
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 117 0.00011 1
TAIR|locus:2165311 - symbol:AT5G51780 "AT5G51780" species... 92 0.00014 2
UNIPROTKB|Q7XT88 - symbol:OSJNBa0042L16.11 "OSJNBa0042L16... 108 0.00020 2
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 102 0.00024 2
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 101 0.00057 2
>TAIR|locus:2012146 [details] [associations]
symbol:RGE1 "AT1G49770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009790 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011807 EMBL:AF488623 IPI:IPI00539453 PIR:D96534
RefSeq:NP_175399.2 UniGene:At.38170 ProteinModelPortal:Q9FXA3
SMR:Q9FXA3 EnsemblPlants:AT1G49770.1 GeneID:841400
KEGG:ath:AT1G49770 TAIR:At1g49770 eggNOG:NOG272533
HOGENOM:HOG000272699 InParanoid:Q9FXA3 OMA:DHEIHIW PhylomeDB:Q9FXA3
ProtClustDB:CLSN2918353 Genevestigator:Q9FXA3 Uniprot:Q9FXA3
Length = 308
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 88/219 (40%), Positives = 120/219 (54%)
Query: 85 KKAVKVKEGES-EHEIHIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIX 143
K+ K E ES +HEIHIWTERERRKKMR+MF+ LH+LLPQLPPKADKS+IVDEAVS I
Sbjct: 58 KRNDKNHEEESPDHEIHIWTERERRKKMRDMFSKLHALLPQLPPKADKSTIVDEAVSSIK 117
Query: 144 XXXXXXXXXX---------XXXXXXXXGVASFGFEASAAITPQNKLAIVA-HDHQQGSSS 193
+F + S++ +P L ++ H ++
Sbjct: 118 SLEQTLQKLEMQKLEKLQYSSASTNTTPTTTFAYAPSSSSSPTALLTPISNHPIDATATD 177
Query: 194 NLLGXXXXXXXXXXXXXXXVSPTYP-----VIFQTWTSSNVVLNICGDEAHISICSPK-K 247
+ + YP V F TW+S NVVL ICG+EA ++C PK K
Sbjct: 178 SYPRAAFLADQVSSSSAAAANLPYPCNDPIVNFDTWSSRNVVLTICGNEAFFNLCVPKHK 237
Query: 248 PGMFSTICYVLEKHKIEVISAQVSSDLTRRMYMIQVHVN 286
PG+F+++CY+ EK+ +EV+ A VSS++ Y+IQ VN
Sbjct: 238 PGVFTSVCYLFEKYNMEVLFANVSSNVFWSTYVIQAQVN 276
>UNIPROTKB|Q6YYG9 [details] [associations]
symbol:OSJNBa0051E21.18 "Putative uncharacterized protein
OSJNBa0051E21.18" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG272533 EMBL:AP005611
ProteinModelPortal:Q6YYG9 Gramene:Q6YYG9 Uniprot:Q6YYG9
Length = 327
Score = 176 (67.0 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 33/89 (37%), Positives = 56/89 (62%)
Query: 218 PVIFQTWTSSNVVLNICG-DEAHISICSPKKPGMFSTICYVLEKHKIEVISAQVSSDLTR 276
P W+ +VVLN+CG D+A I++ ++PG+ + I VLE+H I+V++AQ++SDL+R
Sbjct: 228 PGTLMVWSGPSVVLNLCGGDQAFINVSVARRPGVLTMIVDVLERHSIDVVTAQIASDLSR 287
Query: 277 RMYMIQVHVNGASDQFSEALPVEEMYKQA 305
++ I V+ F + EE+Y+ A
Sbjct: 288 SLFTIHTSVDRERGMFMDTATAEEIYQLA 316
Score = 117 (46.2 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 93 GESEHEIHIWTERERRKKMRNMFANLHSLLPQLPPK-----------ADKSSIVDEAVSY 141
G S +HI+ ERERR+K++NMF +L L+P L K ADK++IV EA+S+
Sbjct: 88 GRSRERMHIFAERERRRKIKNMFTDLRDLVPSLTNKCGDVMDEMMFQADKATIVGEAISF 147
Query: 142 I 142
I
Sbjct: 148 I 148
>UNIPROTKB|Q6YYG5 [details] [associations]
symbol:OSJNBa0051E21.28 "Putative uncharacterized protein
OSJNBa0051E21.28" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP005611 ProteinModelPortal:Q6YYG5
KEGG:dosa:Os02t0548100-00 Gramene:Q6YYG5 Uniprot:Q6YYG5
Length = 365
Score = 109 (43.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 104 ERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYI 142
ERERR++M +MFA + L+P LP K+ + I+D A++YI
Sbjct: 96 ERERRRRMNDMFAGIRRLVPNLPEKSSRVEIIDGAIAYI 134
Score = 84 (34.6 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 24/100 (24%), Positives = 52/100 (52%)
Query: 213 VSPTYPVIFQTWT-SSNVVLNICGDEAHISICSP-KKPGMFSTICYVLEKHKIEVISAQV 270
V+P P +TW+ NVV+++ G+ ++++ +P ++ G+ + L+++ I +++
Sbjct: 258 VAP--PPSLKTWSWGDNVVVSVLGNIGNMTVRAPLRRTGVLAMASAALKRYNITAVTSLS 315
Query: 271 SSDLTR--RMYMIQVHVN--GASDQFSEALPVEEMYKQAA 306
+D +R M+M ++ QF E MY+ AA
Sbjct: 316 GTDASRTQNMFMFYTIIDMPDRQPQFVHPKVFEAMYRAAA 355
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 117 (46.2 bits), Expect = 0.00011, P = 0.00011
Identities = 49/196 (25%), Positives = 78/196 (39%)
Query: 100 HIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIXXXXXXXXXXXXXXXXX 159
+I ER+RR+K+ L S++P + K DK+SI+ +A+ YI
Sbjct: 94 NILMERDRRRKLNEKLYALRSVVPNIT-KMDKASIIKDAIEYIQRLQAEEQQMLREVAAL 152
Query: 160 XXGVASFGFEASAAITPQNKLAI-----VAHDHQQGSSSNL--LGXXXXXXXXXXXXXXX 212
A+ A AA P L H H SS +
Sbjct: 153 ESAAAASA--APAAANPFAGLGADEEHEYGHHHPSSSSERTKKVKRALSVSSISDALLAA 210
Query: 213 VSPTYPVIFQTWTSSNVVLNICGDEAHI-SI-CSPKKPGMFSTICYVLEKHKIEVISAQV 270
+P PV Q S V GD + S+ CS ++ M + +C LE+ ++ VI+A +
Sbjct: 211 AAPAPPVEIQELRVSEV-----GDRVLVVSVTCSKRRDAM-ARVCRALEELRLRVITANI 264
Query: 271 SSDLTRRMYMIQVHVN 286
+S M+ + V V+
Sbjct: 265 TSVAGCPMHTLFVEVD 280
>TAIR|locus:2165311 [details] [associations]
symbol:AT5G51780 "AT5G51780" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB010074
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT010952 EMBL:BT011640 EMBL:AF488575
IPI:IPI00545273 RefSeq:NP_199991.1 UniGene:At.29661
ProteinModelPortal:Q9FLI1 SMR:Q9FLI1 IntAct:Q9FLI1 PaxDb:Q9FLI1
PRIDE:Q9FLI1 EnsemblPlants:AT5G51780.1 GeneID:835252
KEGG:ath:AT5G51780 TAIR:At5g51780 eggNOG:NOG314277
HOGENOM:HOG000090029 InParanoid:Q9FLI1 OMA:MHRETER PhylomeDB:Q9FLI1
ProtClustDB:CLSN2685686 Genevestigator:Q9FLI1 Uniprot:Q9FLI1
Length = 174
Score = 92 (37.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 96 EHEIHIWTERERRKKMRNMFANLHSLLPQ--LPPKADKSSIVDEAVSYI 142
E +H TER+RR++M +++A+L SLLP + K S V+EAV+YI
Sbjct: 2 EKMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYI 50
Score = 52 (23.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 227 SNVVLNIC--GDEAHISI-CSPKKPGMFSTICYVLEKHKIEVISAQVSSDLTRRM-YMIQ 282
++VV+ C G E +S C +P FS++ VL ++ + ++++ +SS + R+ Y IQ
Sbjct: 94 NHVVVRQCLVGVEIMLSSRCCGGQP-RFSSVLQVLSEYGLCLLNS-ISSIVDDRLVYTIQ 151
Query: 283 VHVN 286
VN
Sbjct: 152 AEVN 155
>UNIPROTKB|Q7XT88 [details] [associations]
symbol:OSJNBa0042L16.11 "OSJNBa0042L16.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 GO:GO:0005634 Gene3D:4.10.280.10
EMBL:AL606632 UniGene:Os.73033 Gramene:Q7XT88 Genevestigator:Q7XT88
Uniprot:Q7XT88
Length = 239
Score = 108 (43.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 28/98 (28%), Positives = 50/98 (51%)
Query: 213 VSPTYPVI-FQTWTSSNVVLNICGDEAHISICSPKKPGMFSTIC---YVLEKHKIEVISA 268
V P P QTWT N+ ++ GD+ I++ P + G + + VLE+H I+V++A
Sbjct: 132 VPPPPPAASLQTWTGPNMTASLTGDDGFITLSLPHQGGQKNLVAGAVSVLERHHIDVVTA 191
Query: 269 QVS-SDLTRRMYMIQVHVNGASDQFSEALPVEEMYKQA 305
VS S+ + + H++ S P+++ +K A
Sbjct: 192 TVSASEQGDNLISLHCHLSPGSSSSQNLTPLDK-FKLA 228
Score = 38 (18.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 128 KADKSSIVDEAVSYI 142
+ DK++IV+ ++YI
Sbjct: 28 QTDKATIVEATINYI 42
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 102 (41.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 85 KKAVKVKEGESEHEIHIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYI 142
K+ + G +E H+ ER+RR+K+ F L S++P + K DK+S++ +AVSYI
Sbjct: 419 KRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNIS-KMDKASLLGDAVSYI 475
Score = 57 (25.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/58 (24%), Positives = 31/58 (53%)
Query: 227 SNVVLNICGDEAHISICSPKKPGMFSTICYVLEKHKIEVISA--QVSSDLTRRMYMIQ 282
S++ + G++ + I P + S I + E+ K+EVI++ +VS D ++++
Sbjct: 504 SDINVQTSGEDVTVRINCPLESHPASRIFHAFEESKVEVINSNLEVSQDTVLHTFVVK 561
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 101 (40.6 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 100 HIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYI 142
H+ +ER RR+K+ MF L SL+P + K DK+SI+ E ++Y+
Sbjct: 189 HVMSERRRREKLNEMFLILKSLVPSID-KVDKASILSETIAYL 230
Score = 49 (22.3 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 222 QTWTSSNV-VLNICGDEAHISICSPKKPGMFSTICYVLEKHKIEVISAQVSS 272
Q T S+V V+ + DE H+ + K M + + ++ +++V+S Q S+
Sbjct: 284 QEGTPSDVRVIVMDKDELHLEVQCRWKELMMTRVFDAIKSLRLDVVSVQASA 335
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.128 0.368 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 306 238 0.00091 113 3 11 23 0.47 33
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 603 (64 KB)
Total size of DFA: 184 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.93u 0.09s 20.02t Elapsed: 00:00:01
Total cpu time: 19.94u 0.09s 20.03t Elapsed: 00:00:01
Start: Sat May 11 05:16:28 2013 End: Sat May 11 05:16:29 2013