BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037241
(306 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FXA3|BH095_ARATH Transcription factor bHLH95 OS=Arabidopsis thaliana GN=BHLH95 PE=2
SV=2
Length = 308
Score = 185 bits (470), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/241 (44%), Positives = 151/241 (62%), Gaps = 19/241 (7%)
Query: 85 KKAVKVKEGES-EHEIHIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIK 143
K+ K E ES +HEIHIWTERERRKKMR+MF+ LH+LLPQLPPKADKS+IVDEAVS IK
Sbjct: 58 KRNDKNHEEESPDHEIHIWTERERRKKMRDMFSKLHALLPQLPPKADKSTIVDEAVSSIK 117
Query: 144 TLQQTLRKLQKQKLERLQGVAS---------FGF------EASAAITPQNKLAIVAHDHQ 188
+L+QTL+KL+ QKLE+LQ ++ F + +A +TP + I A
Sbjct: 118 SLEQTLQKLEMQKLEKLQYSSASTNTTPTTTFAYAPSSSSSPTALLTPISNHPIDATATD 177
Query: 189 QGSSSNLLGANSTDATNNSSNLLSVSPTYPVIFQTWTSSNVVLNICGDEAHISICSPK-K 247
+ L + ++ ++NL V F TW+S NVVL ICG+EA ++C PK K
Sbjct: 178 SYPRAAFLADQVSSSSAAAANLPYPCNDPIVNFDTWSSRNVVLTICGNEAFFNLCVPKHK 237
Query: 248 PGMFSTICYVLEKHKIEVISAQVSSDLTRRMYMIQVHVNGASDQ--FSEALPVEEMYKQA 305
PG+F+++CY+ EK+ +EV+ A VSS++ Y+IQ VN + + L V +++KQ
Sbjct: 238 PGVFTSVCYLFEKYNMEVLFANVSSNVFWSTYVIQAQVNPSCENQLLGNGLGVVDVFKQV 297
Query: 306 A 306
+
Sbjct: 298 S 298
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 15/143 (10%)
Query: 28 APLVSDTTLAPPQPSSSKI-PKLNKKQETSQGSSK---KRARGEGGGE----VGKD--GN 77
P + P Q SS ++ P + + S SS+ + GEGGGE VG D GN
Sbjct: 355 VPSTDEFKFLPLQQSSQRLLPPAQMQIDFSAASSRASENNSDGEGGGEWADAVGADESGN 414
Query: 78 LLKGSDDKKAVKVKEGESEHEIHIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDE 137
K+ + G +E H+ ER+RR+K+ F L S++P + K DK+S++ +
Sbjct: 415 ---NRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNI-SKMDKASLLGD 470
Query: 138 AVSYIKTLQQTLRKLQKQKLERL 160
AVSYI L L+ ++ ++ ERL
Sbjct: 471 AVSYINELHAKLKVMEAER-ERL 492
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 100 HIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKTLQQTLRKLQKQK 156
H+ ER+RR+K+ F L +LLP L KADK +I+D+A+S +K LQ+ LR L+++K
Sbjct: 120 HVLAERKRREKLSEKFIALSALLPGLK-KADKVTILDDAISRMKQLQEQLRTLKEEK 175
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Query: 42 SSSKIPKLNKKQETSQGSSKKRARGEGGGEVGKDGNLLKGSDDKKAVKVKEGESEHEIHI 101
++S P N +QE S+ ++KR G G + + K+ K G E H+
Sbjct: 339 AASSNPSTNTQQEKSESCTEKRPVSLLAG-AGIVSVVDEKRPRKRGRKPANGREEPLNHV 397
Query: 102 WTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKTLQQTLRKLQKQKL 157
ER+RR+K+ F L S++P + K DK+S++ +A+SYIK LQ+ ++ ++ +++
Sbjct: 398 EAERQRREKLNQRFYALRSVVPNIS-KMDKASLLGDAISYIKELQEKVKIMEDERV 452
>sp|Q9M8K6|MUTE_ARATH Transcription factor MUTE OS=Arabidopsis thaliana GN=MUTE PE=2 SV=1
Length = 202
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 21/189 (11%)
Query: 100 HIWTERERRKKMRNMFANLHSLLPQLPPK-ADKSSIVDEAVSYIKTLQQTLRKLQKQKLE 158
HI ER RR++M +L SL P K D++SI+ + +IK LQQ ++ L+ +K
Sbjct: 3 HIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKKRR 62
Query: 159 RLQGVASFGFEASAAITPQNKLAIVAHDHQQGSSSNLLGANSTDATNNSSNLLSVSPTYP 218
+ SF + DHQ S+L A + + N+++ S T+
Sbjct: 63 KTLNRPSFPY-----------------DHQTIEPSSLGAATTRVPFSRIENVMTTS-TFK 104
Query: 219 VIFQTWTS--SNVVLNICGDEAHISICSPKKPGMFSTICYVLEKHKIEVISAQVSSDLTR 276
+ S +NV I G + + S + G I VLEK +V+ +SS
Sbjct: 105 EVGACCNSPHANVEAKISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEET 164
Query: 277 RMYMIQVHV 285
+Y V +
Sbjct: 165 VLYFFVVKI 173
>sp|Q56YJ8|FAMA_ARATH Transcription factor FAMA OS=Arabidopsis thaliana GN=FMA PE=1 SV=1
Length = 414
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 91 KEGESEHEIHIWTERERRKKMRNMFANLHSLLP-QLPPKADKSSIVDEAVSYIKTLQQTL 149
+E ES+ HI ER RRK+M L SL+P + D++SI+ A+ +++ L+Q L
Sbjct: 190 EEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLL 249
Query: 150 RKLQKQKLERLQG 162
+ L+ QK R+ G
Sbjct: 250 QCLESQKRRRILG 262
>sp|Q56XR0|BH071_ARATH Transcription factor bHLH71 OS=Arabidopsis thaliana GN=BHLH71 PE=1
SV=1
Length = 327
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 91 KEGESEHEIHIWTERERRKKMRNMFANLHSLLPQ-LPPKADKSSIVDEAVSYIKTLQQTL 149
+E E++ HI ER RR++M + L SL+PQ K D++SIV A+ +IK L+ L
Sbjct: 81 EEAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKL 140
Query: 150 RKLQKQK 156
L+ QK
Sbjct: 141 LSLEAQK 147
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 85 KKAVKVKEGESEHEIHIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKT 144
K+A +S + HI ER+RR+K+ F L +L+P L K DK+S++ +A+ +IK
Sbjct: 138 KRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALVPGLK-KMDKASVLGDALKHIKY 196
Query: 145 LQQTLRKLQKQKLER 159
LQ+ + +L++QK ER
Sbjct: 197 LQERVGELEEQKKER 211
>sp|Q9LND0|BH089_ARATH Transcription factor bHLH89 OS=Arabidopsis thaliana GN=BHLH89 PE=2
SV=1
Length = 420
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 103 TERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKTLQQTL--------RKLQK 154
TERERR ++ F +L +L+P P K D++SIV EA+ YIK L +T+ +K K
Sbjct: 220 TERERRVHFKDRFGDLKNLIPN-PTKNDRASIVGEAIDYIKELLRTIDEFKLLVEKKRVK 278
Query: 155 QKLERLQGVASFGFEASAAITPQ 177
Q+ V F+A + + Q
Sbjct: 279 QRNREGDDVVDENFKAQSEVVEQ 301
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 100 HIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKTLQQTLRKLQKQK 156
H+ +ER+RR+K+ MF L SLLP + + +K+SI+ E ++Y+K LQ+ +++L+ +
Sbjct: 419 HVMSERKRREKLNEMFLVLKSLLPSI-HRVNKASILAETIAYLKELQRRVQELESSR 474
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 100 HIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKTLQQTLRKLQKQK 156
H+ +ER+RR+K+ MF L SLLP + + +K+SI+ E ++Y+K LQ+ +++L+ +
Sbjct: 417 HVMSERKRREKLNEMFLVLKSLLPSI-HRVNKASILAETIAYLKELQRRVQELESSR 472
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 69 GGEVGKDGNLLKGSDDK---KAVKVKEGESEHEIHIWTERERRKKMRNMFANLHSLLPQL 125
G E GKD L + K + K G E H+ ER+RR+K+ F L +++P +
Sbjct: 287 GYEQGKDETLYLTDEQKPRKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNI 346
Query: 126 PPKADKSSIVDEAVSYIKTLQQTLRKLQKQK 156
K DK+S++ +A++YI +Q+ +R + +K
Sbjct: 347 -SKMDKASLLADAITYITDMQKKIRVYETEK 376
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 85 KKAVKVKEGESEHEIHIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKT 144
K+ K G E H+ ER+RR+K+ F +L +++P + K DK+S++ +A+SYI
Sbjct: 402 KRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVS-KMDKASLLGDAISYISE 460
Query: 145 LQQTLRKLQKQKLERLQGVASFGFEASAA 173
L+ L+K + K E + + EA A
Sbjct: 461 LKSKLQKAESDKEELQKQIDVMNKEAGNA 489
>sp|Q9M128|BH057_ARATH Transcription factor bHLH57 OS=Arabidopsis thaliana GN=BHLH57 PE=2
SV=1
Length = 315
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 92 EGESEHEIHIWTERERRKKMRNMFANLHSLLP-QLPPKADKSSIVDEAVSYIKTLQQTLR 150
E E++ HI ER RR++M +L SL+P + D++SIV A+ +IK L+Q L+
Sbjct: 109 EVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQ 168
Query: 151 KLQKQK 156
L+ +K
Sbjct: 169 SLEAEK 174
>sp|Q9FLI1|BH036_ARATH Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2
SV=1
Length = 174
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 96 EHEIHIWTERERRKKMRNMFANLHSLLPQ--LPPKADKSSIVDEAVSYIKTLQQTLRKLQ 153
E +H TER+RR++M +++A+L SLLP + K S V+EAV+YIK LQ+ +++L
Sbjct: 2 EKMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELS 61
Query: 154 KQK 156
++
Sbjct: 62 VRR 64
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 85 KKAVKVKEGESEHEIHIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKT 144
K+ K G E H+ ER+RR+K+ F +L +++P + K DK+S++ +A+SYI
Sbjct: 401 KRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNV-SKMDKASLLGDAISYINE 459
Query: 145 LQQTLRKLQKQKLE---RLQGVASFG 167
L+ L++ + K E +L G++ G
Sbjct: 460 LKSKLQQAESDKEEIQKKLDGMSKEG 485
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 85 KKAVKVKEGESEHEIHIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKT 144
K+ K G E H+ ER+RR+K+ F L +++P + K DK+S++ +A++YI
Sbjct: 438 KRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNV-SKMDKASLLGDAIAYINE 496
Query: 145 LQQTLRKLQKQKLE 158
L+ + K + +KL+
Sbjct: 497 LKSKVVKTESEKLQ 510
>sp|Q84TK1|BH010_ARATH Transcription factor bHLH10 OS=Arabidopsis thaliana GN=BHLH10 PE=2
SV=1
Length = 458
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 103 TERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKTLQQTLRKLQ 153
TERERR + F +L +L+P P K D++SIV EA+ YIK L +T+ + +
Sbjct: 251 TERERRVHFNDRFFDLKNLIPN-PTKIDRASIVGEAIDYIKELLRTIEEFK 300
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 100 HIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKTLQQTLRKLQKQKL 157
H+ ER+RR+K+ L +LLP L K DK++++++A+ ++K LQ+ ++KL+++++
Sbjct: 133 HVLAERKRRQKLNERLIALSALLPGLK-KTDKATVLEDAIKHLKQLQERVKKLEEERV 189
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 78 LLKGSDDKKAVKVKEGESEHEIHIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDE 137
+++G+ K+A + +S + HI ER+RR+K+ F L +L+P L K DK+S++ +
Sbjct: 107 IIRGT--KRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLK-KMDKASVLGD 163
Query: 138 AVSYIKTLQQTL 149
A+ +IK LQ+++
Sbjct: 164 AIKHIKYLQESV 175
>sp|Q8QGQ7|BMAL2_CHICK Aryl hydrocarbon receptor nuclear translocator-like protein 2
OS=Gallus gallus GN=ARNTL2 PE=1 SV=1
Length = 622
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 6/75 (8%)
Query: 75 DGNLLKGSDDKKAVKVKEGESEHEIHIWTERERRKKMRNMFANLHSLLPQLPP---KADK 131
DG+ K ++D++ +K+K+ E H TE+ RR KM N+ L +++PQ P K DK
Sbjct: 75 DGDPQKRNEDEEHLKIKDF---REAHSQTEKRRRDKMNNLIEELSAMIPQCNPMARKLDK 131
Query: 132 SSIVDEAVSYIKTLQ 146
+++ AV ++K+L+
Sbjct: 132 LTVLRMAVQHLKSLK 146
>sp|O81037|BH070_ARATH Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2
SV=1
Length = 371
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 90 VKEGESEHEIHIWTERERRKKMRNMFANLHSLLPQ-LPPKADKSSIVDEAVSYIKTLQQT 148
++E ES+ HI ER RR++M +L S++P + D++SIV A+ ++K L+Q
Sbjct: 185 IEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQ 244
Query: 149 LRKLQKQK 156
L+ L+ QK
Sbjct: 245 LQSLEAQK 252
>sp|Q9LQ08|BH125_ARATH Transcription factor bHLH125 OS=Arabidopsis thaliana GN=BHLH125
PE=2 SV=1
Length = 259
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 22/163 (13%)
Query: 19 GFFMENPAWAP--LVSDTTLAPPQPSSSKIPKLNKKQETSQGSSKKRARGE---GGGEVG 73
FM + + L SD+ L P S + GS+KKR+ + G E
Sbjct: 6 SLFMPDSTYEDGLLFSDSFLLSPFISYQNNDVFHSITNKIGGSNKKRSLCDITYGANEAN 65
Query: 74 KDGNLLKGSDDKKAVKVKEGESEHEIHIWTERERRKKMRNMFANLHSLLP--QLPPKADK 131
K+ DD+++ K+K H ER+RR+++ ++F L +LLP + K
Sbjct: 66 KND------DDRESKKMK--------HRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRST 111
Query: 132 SSIVDEAVSYIKTLQQTLRKLQKQKLERLQGVASFGFEASAAI 174
S + +AV+YIK LQ +++L +K R++ V S +AI
Sbjct: 112 SDHIVQAVNYIKDLQIKIKELN-EKRNRVKKVISATTTTHSAI 153
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 100 HIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKTLQQTLRKLQKQ 155
++ ER RRKK+ + L SL+P++ K D++SI+ +A++Y+K LQ ++LQ +
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVPRI-TKLDRASILGDAINYVKELQNEAKELQDE 369
>sp|Q700E4|BH067_ARATH Transcription factor bHLH67 OS=Arabidopsis thaliana GN=BHLH67 PE=2
SV=1
Length = 358
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 91 KEGESEHEIHIWTERERRKKMRNMFANLHSLLP-QLPPKADKSSIVDEAVSYIKTLQQTL 149
+E E++ HI ER RR++M +L +LLP + D++SIV A++Y+K L+Q +
Sbjct: 171 EEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQII 230
Query: 150 RKLQKQK 156
+ L+ QK
Sbjct: 231 QSLESQK 237
>sp|Q9SK91|BH094_ARATH Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2
SV=2
Length = 304
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 91 KEGESEHEIHIWTERERRKKMRNMFANLHSLLP-QLPPKADKSSIVDEAVSYIKTLQQTL 149
+E E++ HI ER RRK+M A L SL+P + D++SIV A++Y+K L+ L
Sbjct: 108 EEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHIL 167
Query: 150 RKLQKQK 156
+ ++ ++
Sbjct: 168 QSMEPKR 174
>sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2
SV=1
Length = 320
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 91 KEGESEHEIHIWTERERRKKMRNMFANLHSLL-PQLPPKADKSSIVDEAVSYIKTLQQTL 149
+E E++ HI ER RRK+M A L SL+ P + D++SIV A++Y+K L+ L
Sbjct: 118 EEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHL 177
Query: 150 RKLQ 153
+ ++
Sbjct: 178 QSME 181
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Query: 63 RARGEGGGEVGKDGNLLKGSDDKKAVKV-----KEGESEHEIHIWTERERRKKMRNMFAN 117
RA GE E DG DD A ++ +++ + +ER RR +M++
Sbjct: 96 RAGGEEDEEDYNDG------DDSSATTTNNDGTRKTKTDRSRTLISERRRRGRMKDKLYA 149
Query: 118 LHSLLPQLPPKADKSSIVDEAVSYIKTLQQTLRKLQ 153
L SL+P + K DK+SIV +AV Y++ LQ +KL+
Sbjct: 150 LRSLVPNIT-KMDKASIVGDAVLYVQELQSQAKKLK 184
>sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=1
SV=1
Length = 259
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 16/154 (10%)
Query: 6 GGGGGGEGGLLHEGFFMENPA-WAPLVSDTTLAPPQPSSSKIPKLNKKQETSQGSSKKRA 64
G G G +G + G PA + L ++ ++P K ++ ET S K
Sbjct: 108 GSGSGTDGYFSNFGI----PANYDYLSTNVDISPT--------KRSRDMETQFSSQLKEE 155
Query: 65 RGEGGGEVGKDGNLLKGSDDKKAVKV--KEGESEHEIHIWTERERRKKMRNMFANLHSLL 122
+ GG D N+ K +D +V K G + H I ER RR ++ + L L+
Sbjct: 156 QMSGGISGMMDMNMDKIFEDSVPCRVRAKRGCATHPRSI-AERVRRTRISDRIRRLQELV 214
Query: 123 PQLPPKADKSSIVDEAVSYIKTLQQTLRKLQKQK 156
P + + + + +++EAV Y+K LQ +++L +Q+
Sbjct: 215 PNMDKQTNTADMLEEAVEYVKALQSQIQELTEQQ 248
>sp|Q9FIX5|BH092_ARATH Transcription factor bHLH92 OS=Arabidopsis thaliana GN=BHLH92 PE=2
SV=1
Length = 247
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 77 NLLKGSDDKKAVKVKEGESEHEIHIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVD 136
NLL+ + ++K V + H+ ER RR+K + + LHSLLP K DK+SIV+
Sbjct: 67 NLLRKNWEEKKNTVAPEKERSRRHMLKERTRREKQKQSYLALHSLLP-FATKNDKNSIVE 125
Query: 137 EAVSYIKTLQQTLRKLQKQKLERLQGV 163
+AV I LQ +L+K+ + R++ +
Sbjct: 126 KAVDEIAKLQ----RLKKELVRRIKVI 148
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 99 IHIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKTLQQTLR 150
+H +ER RR+K+ M L LLP+ K D+SS++D+ + Y+K+LQ ++
Sbjct: 281 MHKLSERRRRQKINEMMKALQELLPRCT-KTDRSSMLDDVIEYVKSLQSQIQ 331
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 100 HIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKTLQQTLRKLQ 153
H +E++RR+K+ F L S++P + K DK SI+D+ + Y++ LQ+ +++L+
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIPSI-SKIDKVSILDDTIEYLQDLQKRVQELE 458
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 98 EIHIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKTLQ 146
E+H +ER+RR ++ L L+P+ K+DK+S++DEA+ Y+K+LQ
Sbjct: 287 EVHNLSERKRRDRINERMKALQELIPRCN-KSDKASMLDEAIEYMKSLQ 334
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 98 EIHIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKTLQ 146
E+H +ER RR ++ L L+P K DK+S++DEA+ Y+K+LQ
Sbjct: 346 EVHNLSERRRRDRINEKMRALQELIPNCN-KVDKASMLDEAIEYLKSLQ 393
>sp|Q8H102|BH128_ARATH Transcription factor bHLH128 OS=Arabidopsis thaliana GN=BHLH128
PE=1 SV=1
Length = 362
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 88 VKVKEGESEHEIHIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKTLQQ 147
++ K G + H I ERERR ++ L L+P + + S ++D AV +IK LQ
Sbjct: 283 IRAKRGCATHPRSI-AERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQH 341
Query: 148 TLRKLQKQK 156
L+ L+K +
Sbjct: 342 QLQNLKKDQ 350
>sp|Q9FKQ6|BH099_ARATH Transcription factor bHLH99 OS=Arabidopsis thaliana GN=BHLH99 PE=2
SV=1
Length = 296
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 90 VKEGESEHEIHIWTERERRKKMRNMFANLHSLLP-QLPPKADKSSIVDEAVSYIKTLQQT 148
+ + E++ HI ER RRK+M + + L S++P D++SI++ +SY+K L+Q
Sbjct: 94 IVDKENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYLKKLEQR 153
Query: 149 LRKLQKQ 155
L+ L+ Q
Sbjct: 154 LQSLEAQ 160
>sp|Q700C7|SPCH_ARATH Transcription factor SPEECHLESS OS=Arabidopsis thaliana GN=SPCH
PE=1 SV=1
Length = 364
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 100 HIWTERERRKKMRNMFANLHSLLPQLPPK-ADKSSIVDEAVSYIKTLQQTLRKLQKQK 156
H+ ER RRK+M L SL+P K D++SI+ V YI LQQ L+ L+ +K
Sbjct: 104 HVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAKK 161
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 98 EIHIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKTLQQTLRKLQKQKL 157
E+H +E+ RR ++ L SL+P K DK+S++DEA+ Y+K LQ LQ Q L
Sbjct: 200 EVHNLSEKRRRSRINEKMKALQSLIPN-SNKTDKASMLDEAIEYLKQLQ-----LQVQML 253
Query: 158 ERLQGV 163
G+
Sbjct: 254 TMRNGI 259
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 85 KKAVKVKEGESEHEIHIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKT 144
K V+ + G++ + H ER RR+++ +L L+P K DK+S++DE + Y++
Sbjct: 96 KPRVRARRGQAT-DPHSIAERLRRERIAERMKSLQELVPNTN-KTDKASMLDEIIEYVRF 153
Query: 145 LQQTLRKLQKQKLERLQGVASFG 167
LQ ++ L + RL G S G
Sbjct: 154 LQLQVKVL---SMSRLGGAGSVG 173
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 100 HIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKTLQQTLRKLQKQ 155
+I +ER RR+K+ L S++P + K DK+SI+ +A+SYI+ LQ +KL+ +
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPNIT-KMDKASIIKDAISYIEGLQYEEKKLEAE 110
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 85 KKAVKVKEGESEHEIHIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKT 144
K V+ + G++ + H ER RR+++ +L L+P K DK+S++DE + Y+K
Sbjct: 127 KPKVRARRGQAT-DPHSIAERLRRERIAERMKSLQELVPN-GNKTDKASMLDEIIDYVKF 184
Query: 145 LQQTLRKLQKQKLERLQGVAS 165
LQ ++ L + RL G AS
Sbjct: 185 LQLQVKVL---SMSRLGGAAS 202
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 85 KKAVKVKEGESEHEIHIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKT 144
+ ++ + G++ + H ER RR+++ L L+P K DK+S++DE + Y+K
Sbjct: 135 RTKIRARRGQAT-DPHSIAERLRRERIAERMKALQELVPN-GNKTDKASMLDEIIDYVKF 192
Query: 145 LQQTLRKLQKQKLERLQGVASFGFEASAA 173
LQ ++ L + RL G AS + S A
Sbjct: 193 LQLQVKVL---SMSRLGGAASVSSQISEA 218
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
Length = 416
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 98 EIHIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKTLQ 146
E+H ER+RR + L LLP K DK+S++DEA+ Y++TLQ
Sbjct: 232 EVHKLYERKRRDEFNKKMRALQDLLPNCY-KDDKASLLDEAIKYMRTLQ 279
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 66 GEGGGEVGKDGNLL--KGSDDKKAVKVKEGESEHEIHIWTERERRKKMRNMFANLHSLLP 123
G G E G+D K S K+ +K + + H +E++RR K+ L L+P
Sbjct: 63 GYGVSETGQDKYAFEHKRSGAKQRNSLKRN-IDAQFHNLSEKKRRSKINEKMKALQKLIP 121
Query: 124 QLPPKADKSSIVDEAVSYIKTLQQTLRKLQKQKLERLQGV 163
K DK+S++DEA+ Y+K LQ LQ Q L + G+
Sbjct: 122 N-SNKTDKASMLDEAIEYLKQLQ-----LQVQTLAVMNGL 155
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 100 HIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKTLQQTLRKLQKQ 155
H+ E++RR+K+ + F L +++P++ + DK+S++ +AVSYI++L+ + L+ +
Sbjct: 250 HVEAEKQRREKLNHRFYALRAIVPKVS-RMDKASLLSDAVSYIESLKSKIDDLETE 304
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 85 KKAVKVKEGESEHEIHIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKT 144
K +V K + IH +ER+RR K+ L L+P K DK+S++DE + Y+K
Sbjct: 204 KSSVSTKRSRAA-AIHNQSERKRRDKINQRMKTLQKLVPN-SSKTDKASMLDEVIEYLKQ 261
Query: 145 LQQTLRKLQKQKL 157
LQ + + + +
Sbjct: 262 LQAQVSMMSRMNM 274
>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2
SV=1
Length = 262
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 88 VKVKEGESEHEIHIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKTLQQ 147
V+ K G + H I ER RR ++ + L L+P + + + + +++EAV Y+K LQ+
Sbjct: 184 VRAKRGCATHPRSI-AERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQR 242
Query: 148 TLRKLQKQK 156
+++L +++
Sbjct: 243 QIQELTEEQ 251
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 100 HIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKTLQQTLRKLQKQ 155
++ ER RRKK+ + L S++P++ K D++SI+ +A+ Y+K L Q + L +
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPKIS-KMDRASILGDAIDYLKELLQRINDLHNE 362
>sp|P23999|MYCS_RAT Protein S-Myc OS=Rattus norvegicus GN=Mycs PE=3 SV=1
Length = 429
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 100 HIWTERERRKKMRNMFANLHSLLPQLP--PKADKSSIVDEAVSYIKTLQQTLRKL--QKQ 155
H ER+RR MR+ F NL L+P+L KA K I+ +A YI TLQ KL +++
Sbjct: 351 HNRMERQRRDIMRSSFLNLRDLVPELVHNEKAAKVVILKKATEYIHTLQTDESKLLVERE 410
Query: 156 KL-ERLQ 161
KL ER Q
Sbjct: 411 KLYERKQ 417
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Query: 40 QPSSSKIPKLNKKQETSQGSSKKRARGEGGGEVGKDGNLLKGSDDKKAVKVKEGESEHEI 99
Q SSSK+ E + S ++ G + G + D + +
Sbjct: 208 QSSSSKMCNSESSSEMRKSSYEREIDDTSTGIIDISGLNYESDDHNTNNNKGKKKGMPAK 267
Query: 100 HIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKTLQQTLRKLQKQ 155
++ ER RRKK+ + L S++P++ K D++SI+ +A+ Y+K L Q + L +
Sbjct: 268 NLMAERRRRKKLNDRLYMLRSVVPKIS-KMDRASILGDAIDYLKELLQRINDLHTE 322
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.128 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,743,541
Number of Sequences: 539616
Number of extensions: 4969619
Number of successful extensions: 19891
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 291
Number of HSP's that attempted gapping in prelim test: 19666
Number of HSP's gapped (non-prelim): 441
length of query: 306
length of database: 191,569,459
effective HSP length: 117
effective length of query: 189
effective length of database: 128,434,387
effective search space: 24274099143
effective search space used: 24274099143
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)