Query 037245
Match_columns 215
No_of_seqs 171 out of 2312
Neff 11.4
Searched_HMMs 29240
Date Mon Mar 25 17:24:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037245.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037245hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yyh_A HN1;, notch 1, ankyrin 100.0 1.1E-38 3.7E-43 230.4 20.5 181 19-214 55-235 (253)
2 2f8y_A Notch homolog 1, transl 100.0 2.4E-38 8.3E-43 224.5 21.6 181 19-214 23-203 (223)
3 4gpm_A Engineered protein OR26 100.0 2E-38 6.9E-43 215.0 18.1 160 22-197 5-164 (169)
4 1oy3_D Transcription factor in 100.0 7.4E-38 2.5E-42 229.2 20.5 191 20-214 8-237 (282)
5 2rfa_A Transient receptor pote 100.0 1.6E-37 5.4E-42 221.6 20.2 191 21-214 3-209 (232)
6 2dzn_A Probable 26S proteasome 100.0 2.9E-37 9.9E-42 219.6 20.5 177 22-212 37-218 (228)
7 3aji_A 26S proteasome non-ATPa 100.0 8.4E-38 2.9E-42 222.8 17.7 177 21-213 40-216 (231)
8 2xai_A ASB-9, ankyrin repeat a 100.0 2.7E-37 9.2E-42 224.1 20.3 186 23-213 5-210 (261)
9 3b7b_A Euchromatic histone-lys 100.0 6.2E-37 2.1E-41 219.1 21.6 186 24-213 14-221 (237)
10 3b7b_A Euchromatic histone-lys 100.0 2E-37 6.8E-42 221.7 19.0 166 22-189 45-231 (237)
11 4b93_B Ankyrin repeat domain-c 100.0 2.2E-38 7.4E-43 230.5 13.9 177 21-213 52-229 (269)
12 1yyh_A HN1;, notch 1, ankyrin 100.0 9.6E-38 3.3E-42 225.5 16.1 186 14-214 4-202 (253)
13 3hra_A Ankyrin repeat family p 100.0 8.8E-37 3E-41 213.1 20.2 179 22-214 6-190 (201)
14 3aji_A 26S proteasome non-ATPa 100.0 9.6E-37 3.3E-41 217.3 20.0 178 22-214 7-184 (231)
15 2etb_A Transient receptor pote 100.0 7.7E-37 2.6E-41 221.1 18.2 190 21-214 2-233 (256)
16 3d9h_A CDNA FLJ77766, highly s 100.0 3.8E-36 1.3E-40 220.7 21.8 186 20-210 58-263 (285)
17 1k1a_A B-cell lymphoma 3-encod 100.0 4E-36 1.4E-40 215.3 21.3 178 24-213 12-194 (241)
18 1k1a_A B-cell lymphoma 3-encod 100.0 6.5E-37 2.2E-41 219.4 16.8 187 12-214 38-228 (241)
19 3ljn_A Hypothetical protein; a 100.0 8.2E-37 2.8E-41 231.5 17.8 180 20-214 19-256 (364)
20 2dzn_A Probable 26S proteasome 100.0 9.7E-37 3.3E-41 216.8 17.0 182 22-214 3-186 (228)
21 1oy3_D Transcription factor in 100.0 1E-36 3.6E-41 223.1 17.5 178 21-213 45-269 (282)
22 1s70_B 130 kDa myosin-binding 100.0 1E-36 3.5E-41 225.1 17.4 190 19-212 38-275 (299)
23 2xai_A ASB-9, ankyrin repeat a 100.0 1.5E-36 5.1E-41 220.2 17.8 185 22-213 37-249 (261)
24 1wdy_A 2-5A-dependent ribonucl 100.0 1.7E-35 5.7E-40 216.8 22.6 193 18-214 36-265 (285)
25 3kea_A K1L; tropism, ANK repea 100.0 1.8E-36 6.3E-41 222.3 16.6 183 12-214 23-207 (285)
26 1ikn_D Protein (I-kappa-B-alph 100.0 9.4E-38 3.2E-42 223.3 9.5 184 21-214 8-196 (236)
27 3utm_A Tankyrase-1; tankyrase, 100.0 3.3E-35 1.1E-39 221.3 22.8 101 14-117 52-152 (351)
28 2fo1_E LIN-12 protein; beta-ba 100.0 1.8E-35 6.2E-40 224.7 19.9 195 13-214 159-358 (373)
29 4b93_B Ankyrin repeat domain-c 100.0 6.9E-36 2.3E-40 217.3 16.7 178 22-214 12-197 (269)
30 3d9h_A CDNA FLJ77766, highly s 100.0 1.5E-35 5.2E-40 217.4 17.8 169 22-197 93-282 (285)
31 3v30_A DNA-binding protein rfx 100.0 1.3E-35 4.5E-40 202.3 15.2 169 22-205 3-171 (172)
32 1n11_A Ankyrin; clathrin, BAND 100.0 8.6E-35 2.9E-39 225.3 21.7 174 25-214 216-389 (437)
33 1n11_A Ankyrin; clathrin, BAND 100.0 7.2E-35 2.5E-39 225.7 20.6 190 21-214 14-224 (437)
34 1wdy_A 2-5A-dependent ribonucl 100.0 2.3E-34 7.9E-39 210.7 21.2 191 20-214 4-231 (285)
35 3jxi_A Vanilloid receptor-rela 100.0 2.2E-35 7.4E-40 213.9 15.5 190 22-214 6-237 (260)
36 4gpm_A Engineered protein OR26 100.0 1.1E-34 3.7E-39 196.7 17.3 143 57-214 6-148 (169)
37 2fo1_E LIN-12 protein; beta-ba 100.0 3.2E-35 1.1E-39 223.4 16.1 191 12-214 116-325 (373)
38 3eu9_A Huntingtin-interacting 100.0 2.9E-34 1E-38 205.3 20.2 178 22-214 43-222 (240)
39 2pnn_A Transient receptor pote 100.0 4.4E-35 1.5E-39 213.8 16.0 193 19-214 11-245 (273)
40 1ihb_A P18-INK4C(INK6), cyclin 100.0 8E-35 2.7E-39 196.5 16.1 156 21-191 5-160 (162)
41 4g8k_A 2-5A-dependent ribonucl 100.0 8.4E-34 2.9E-38 212.9 21.8 193 19-214 23-285 (337)
42 2y1l_E Darpin-8.4; hydrolase-i 100.0 4.8E-34 1.6E-38 194.1 17.8 158 19-191 12-169 (169)
43 1sw6_A Regulatory protein SWI6 100.0 9.6E-35 3.3E-39 217.0 14.3 184 19-213 129-327 (327)
44 2f8y_A Notch homolog 1, transl 100.0 1.9E-34 6.6E-39 204.3 15.1 170 31-214 1-170 (223)
45 3eu9_A Huntingtin-interacting 100.0 1.5E-33 5.3E-38 201.5 19.8 177 23-214 11-189 (240)
46 3utm_A Tankyrase-1; tankyrase, 100.0 1.7E-33 5.7E-38 211.9 19.9 175 21-211 91-322 (351)
47 4g8k_A 2-5A-dependent ribonucl 100.0 3.6E-33 1.2E-37 209.5 21.2 196 12-214 50-313 (337)
48 4hbd_A KN motif and ankyrin re 100.0 1.2E-34 3.9E-39 211.8 12.6 176 24-214 79-262 (276)
49 1ikn_D Protein (I-kappa-B-alph 100.0 1.5E-34 5.1E-39 206.7 12.2 183 13-211 38-228 (236)
50 3v31_A Ankyrin repeat family A 100.0 1E-33 3.5E-38 192.1 15.7 156 21-191 3-158 (167)
51 2rfm_A Putative ankyrin repeat 100.0 2.4E-33 8.2E-38 194.4 17.8 151 49-214 29-179 (192)
52 2rfm_A Putative ankyrin repeat 100.0 2.2E-33 7.4E-38 194.6 16.7 156 21-191 35-190 (192)
53 3hra_A Ankyrin repeat family p 100.0 5.8E-33 2E-37 193.7 18.4 165 12-191 31-201 (201)
54 1awc_B Protein (GA binding pro 100.0 1.4E-32 4.8E-37 183.9 17.6 150 22-187 3-152 (153)
55 3f6q_A Integrin-linked protein 100.0 3.5E-33 1.2E-37 191.5 13.7 165 23-202 7-171 (179)
56 3v31_A Ankyrin repeat family A 100.0 1.4E-32 4.8E-37 186.5 16.4 146 54-214 2-147 (167)
57 3v30_A DNA-binding protein rfx 100.0 3E-32 1E-36 185.7 16.5 146 55-214 2-147 (172)
58 2rfa_A Transient receptor pote 100.0 5.2E-32 1.8E-36 193.0 17.6 171 12-197 29-225 (232)
59 3twr_A Tankyrase-2; ankyrin re 100.0 1.3E-32 4.5E-37 186.2 13.7 157 20-191 7-163 (165)
60 2y1l_E Darpin-8.4; hydrolase-i 100.0 5.3E-32 1.8E-36 184.0 16.5 149 51-214 10-158 (169)
61 2vge_A RELA-associated inhibit 100.0 1.8E-35 6.1E-40 210.3 -0.9 177 19-214 19-200 (229)
62 1bd8_A P19INK4D CDK4/6 inhibit 100.0 6.8E-32 2.3E-36 181.1 16.1 152 22-190 3-155 (156)
63 1awc_B Protein (GA binding pro 100.0 7.9E-32 2.7E-36 180.2 15.8 144 55-214 2-145 (153)
64 2pnn_A Transient receptor pote 100.0 1.4E-32 4.8E-37 200.5 12.9 176 19-207 52-272 (273)
65 3ljn_A Hypothetical protein; a 100.0 4.4E-33 1.5E-37 211.0 10.5 153 51-213 134-300 (364)
66 3kea_A K1L; tropism, ANK repea 100.0 1.1E-32 3.7E-37 202.2 11.8 162 21-200 62-226 (285)
67 1ycs_B 53BP2, P53BP2; ankyrin 100.0 2.6E-33 8.9E-38 200.6 6.9 177 20-213 4-192 (239)
68 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.2E-31 4.1E-36 180.9 14.4 146 54-214 4-149 (162)
69 3f6q_A Integrin-linked protein 100.0 5.9E-32 2E-36 185.4 12.2 147 53-213 3-149 (179)
70 3twr_A Tankyrase-2; ankyrin re 100.0 5E-32 1.7E-36 183.4 11.4 147 51-211 4-150 (165)
71 2etb_A Transient receptor pote 100.0 1.5E-31 5.1E-36 193.3 14.2 159 19-191 41-244 (256)
72 1bd8_A P19INK4D CDK4/6 inhibit 100.0 3.1E-31 1.1E-35 177.8 14.7 144 55-214 2-145 (156)
73 4hbd_A KN motif and ankyrin re 100.0 2.4E-31 8.2E-36 194.2 15.1 156 21-191 111-273 (276)
74 3jxi_A Vanilloid receptor-rela 100.0 3.4E-31 1.1E-35 191.9 13.3 160 19-191 44-248 (260)
75 1s70_B 130 kDa myosin-binding 100.0 9.5E-31 3.2E-35 193.1 15.8 173 27-214 4-244 (299)
76 1bi7_B P16INK4A, MTS1, multipl 100.0 1.6E-30 5.6E-35 174.3 10.1 146 49-210 6-152 (156)
77 1d9s_A Cyclin-dependent kinase 100.0 5.9E-30 2E-34 167.8 11.7 131 45-191 3-134 (136)
78 1sw6_A Regulatory protein SWI6 100.0 5.1E-30 1.7E-34 191.5 11.3 167 25-214 101-295 (327)
79 3t8k_A Uncharacterized protein 100.0 4.6E-30 1.6E-34 176.6 7.3 159 24-199 9-184 (186)
80 1ycs_B 53BP2, P53BP2; ankyrin 100.0 3.6E-29 1.2E-33 179.1 10.9 147 52-214 2-151 (239)
81 2vge_A RELA-associated inhibit 100.0 2E-29 7E-34 179.1 7.8 158 37-209 1-163 (229)
82 1n0r_A 4ANK, 4 ankyrin repeats 100.0 1E-27 3.5E-32 154.8 14.8 124 54-191 1-124 (126)
83 2jab_A H10-2-G3; HER2, darpin, 100.0 3.9E-28 1.3E-32 159.1 12.8 125 53-191 12-136 (136)
84 1bi7_B P16INK4A, MTS1, multipl 100.0 7.6E-29 2.6E-33 166.2 8.7 141 19-175 10-151 (156)
85 2jab_A H10-2-G3; HER2, darpin, 100.0 1.3E-27 4.4E-32 156.6 13.8 127 17-157 10-136 (136)
86 1d9s_A Cyclin-dependent kinase 100.0 3.6E-28 1.2E-32 159.2 10.9 132 12-159 4-136 (136)
87 3t8k_A Uncharacterized protein 100.0 8.8E-29 3E-33 170.2 7.4 143 55-214 6-166 (186)
88 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1E-26 3.5E-31 150.1 13.4 125 21-159 2-126 (126)
89 3c5r_A BARD-1, BRCA1-associate 99.9 7.3E-27 2.5E-31 153.2 10.2 128 50-191 5-132 (137)
90 2b0o_E UPLC1; arfgap, structur 99.9 7.7E-27 2.6E-31 172.1 11.2 139 55-214 151-298 (301)
91 3deo_A Signal recognition part 99.9 2.8E-26 9.7E-31 157.6 12.1 140 19-191 42-182 (183)
92 3ui2_A Signal recognition part 99.9 3E-26 1E-30 164.3 12.7 140 19-191 43-183 (244)
93 3c5r_A BARD-1, BRCA1-associate 99.9 2.8E-27 9.6E-32 155.2 6.7 115 84-212 5-119 (137)
94 2aja_A Ankyrin repeat family p 99.9 1.9E-29 6.6E-34 190.6 -4.4 154 22-198 93-254 (376)
95 3ehr_A Osteoclast-stimulating 99.9 9.8E-27 3.4E-31 164.6 7.6 137 51-202 69-206 (222)
96 2b0o_E UPLC1; arfgap, structur 99.9 2.7E-26 9.3E-31 169.2 10.1 137 23-180 153-298 (301)
97 3deo_A Signal recognition part 99.9 2.6E-27 8.9E-32 162.8 3.9 129 52-213 41-170 (183)
98 3aaa_C Myotrophin, protein V-1 99.9 7.8E-26 2.7E-30 145.5 10.2 113 86-212 4-116 (123)
99 2aja_A Ankyrin repeat family p 99.9 1.7E-27 5.9E-32 180.0 1.0 165 24-215 68-238 (376)
100 3aaa_C Myotrophin, protein V-1 99.9 1.1E-25 3.7E-30 144.9 9.3 110 53-176 5-114 (123)
101 3ui2_A Signal recognition part 99.9 3.5E-25 1.2E-29 158.8 10.4 130 52-214 42-172 (244)
102 3ehr_A Osteoclast-stimulating 99.9 1.1E-25 3.9E-30 159.2 7.6 127 21-160 73-199 (222)
103 3lvq_E ARF-GAP with SH3 domain 99.9 3.4E-24 1.2E-28 168.3 14.5 138 54-206 131-277 (497)
104 3jue_A Arfgap with coiled-coil 99.9 3.5E-24 1.2E-28 161.4 12.4 144 54-211 198-346 (368)
105 3jue_A Arfgap with coiled-coil 99.9 7.9E-24 2.7E-28 159.5 12.8 156 22-191 200-362 (368)
106 3lvq_E ARF-GAP with SH3 domain 99.9 1.7E-23 5.9E-28 164.3 13.4 133 23-176 134-275 (497)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3.5E-23 1.2E-27 126.5 11.8 91 88-191 1-91 (93)
108 1dcq_A PYK2-associated protein 99.9 8.2E-23 2.8E-27 149.0 15.3 123 56-192 131-262 (278)
109 1dcq_A PYK2-associated protein 99.9 5E-23 1.7E-27 150.2 13.9 125 23-160 132-264 (278)
110 2l6b_A NR1C; ankyrin, consensu 99.9 1E-23 3.5E-28 134.0 8.7 109 84-206 4-112 (115)
111 1n0q_A 3ANK, 3 ankyrin repeats 99.9 8.8E-23 3E-27 124.7 10.5 91 55-158 2-92 (93)
112 2l6b_A NR1C; ankyrin, consensu 99.9 1.4E-22 4.7E-27 128.7 7.8 109 50-172 4-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 1.8E-19 6.2E-24 113.3 9.5 90 85-187 20-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 5.5E-19 1.9E-23 111.1 9.5 88 19-108 22-109 (110)
115 3zrh_A Ubiquitin thioesterase 62.0 19 0.00066 27.4 5.6 51 26-76 27-90 (454)
116 1gp8_A Protein (scaffolding pr 55.2 11 0.00038 17.7 2.2 20 24-43 16-35 (40)
117 3zrh_A Ubiquitin thioesterase 45.1 52 0.0018 25.2 5.5 58 98-155 31-90 (454)
118 3mkq_B Coatomer subunit alpha; 21.5 1.8E+02 0.0063 19.2 10.4 129 23-190 10-140 (177)
No 1
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.1e-38 Score=230.45 Aligned_cols=181 Identities=21% Similarity=0.231 Sum_probs=169.9
Q ss_pred hhccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHH
Q 037245 19 ATMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAAR 98 (215)
Q Consensus 19 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~ 98 (215)
..+.+|||+|+..|+.+++++|+++|.++ +..+..|.||||+|+..++.+++++|++.....++.++..|.||||+|+.
T Consensus 55 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 133 (253)
T 1yyh_A 55 RTGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAAR 133 (253)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHH
Confidence 34556799999999999999999999999 89999999999999999999999999976666888999999999999999
Q ss_pred hCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHc
Q 037245 99 VGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDS 178 (215)
Q Consensus 99 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~ 178 (215)
.++.+++++|+++|+++ +..+..|.||||+|+..++.+++++|+++|+++ +..+..|.||||+|+..
T Consensus 134 ~~~~~~v~~Ll~~g~~~------------~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~ 200 (253)
T 1yyh_A 134 LAVEGMLEDLINSHADV------------NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANK-DMQNNREETPLFLAARE 200 (253)
T ss_dssp HTCSSHHHHHHHTTCCT------------TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHH
T ss_pred cChHHHHHHHHHcCCCC------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHC
Confidence 99999999999999874 467889999999999999999999999999987 78999999999999999
Q ss_pred CCHHHHHHHHHhCCCCccccCccCccHHHHHHHhCC
Q 037245 179 SLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 179 ~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
++.+++++|+++| ++++.++..|.||+++|+.+|+
T Consensus 201 ~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~g~ 235 (253)
T 1yyh_A 201 GSYETAKVLLDHF-ANRDITDHMDRLPRDIAQERMH 235 (253)
T ss_dssp TCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCHHHHHHHHHcC-CCccccccCCCCHHHHHHHcCC
Confidence 9999999999999 9999999999999999999986
No 2
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2.4e-38 Score=224.45 Aligned_cols=181 Identities=21% Similarity=0.231 Sum_probs=169.5
Q ss_pred hhccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHH
Q 037245 19 ATMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAAR 98 (215)
Q Consensus 19 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~ 98 (215)
..+.+|||.|+..|+.+++++|++++.++ +..+..|.||||+|+..++.+++++|++.....++.++..|.||||+|+.
T Consensus 23 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 101 (223)
T 2f8y_A 23 RTGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAAR 101 (223)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHH
T ss_pred CCCCchHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHH
Confidence 44556799999999999999999999998 88999999999999999999999999976666888899999999999999
Q ss_pred hCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHc
Q 037245 99 VGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDS 178 (215)
Q Consensus 99 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~ 178 (215)
.++.+++++|+++|+++ +..+..|.||||+|+..++.+++++|+++|+++ +..+..|.||||+|+..
T Consensus 102 ~~~~~~~~~Ll~~g~~~------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 168 (223)
T 2f8y_A 102 LAVEGMLEDLINSHADV------------NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANK-DMQNNREETPLFLAARE 168 (223)
T ss_dssp HTCHHHHHHHHHTTCCT------------TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred hCcHHHHHHHHHcCCCC------------cCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCcCHHHHHHHc
Confidence 99999999999999774 367889999999999999999999999999987 78899999999999999
Q ss_pred CCHHHHHHHHHhCCCCccccCccCccHHHHHHHhCC
Q 037245 179 SLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 179 ~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
++.+++++|+++| ++++.++..|.||+++|+.+|+
T Consensus 169 ~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~ 203 (223)
T 2f8y_A 169 GSYETAKVLLDHF-ANRDITDHMDRLPRDIAQERMH 203 (223)
T ss_dssp TCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCHHHHHHHHHcC-CCCccccccCCCHHHHHHHhcc
Confidence 9999999999999 9999999999999999999886
No 3
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=2e-38 Score=214.99 Aligned_cols=160 Identities=23% Similarity=0.417 Sum_probs=146.5
Q ss_pred cHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCC
Q 037245 22 DHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGD 101 (215)
Q Consensus 22 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 101 (215)
..+|+.|++.|+.++++.|+++|+++ +.+|..|.||||+|+..++.+++++|+ ..+.+++.++..|.||||+|+..|+
T Consensus 5 g~~L~~Aa~~G~~~~v~~Ll~~Gadv-n~~d~~g~t~l~~a~~~~~~~~~~~ll-~~gad~~~~d~~g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 5 GKRLIEAAENGNKDRVKDLIENGADV-NASDSDGRTPLHHAAENGHKEVVKLLI-SKGADVNAKDSDGRTPLHHAAENGH 82 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHH-hcccchhhhccCCCCHHHHHHHcCC
Confidence 34699999999999999999999999 999999999999999999999999999 5678899999999999999999999
Q ss_pred HHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCH
Q 037245 102 PAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLT 181 (215)
Q Consensus 102 ~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~ 181 (215)
.+++++|+++|+++ +.+|.+|+||||+|+..|+.+++++|+++|+++ +.++..|+|||++|++.|+.
T Consensus 83 ~~~v~~Ll~~gadv------------n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~g~~ 149 (169)
T 4gpm_A 83 KEVVKLLISKGADV------------NAKDSDGRTPLHHAAENGHKEVVKLLISKGADV-NTSDSDGRTPLDLAREHGNE 149 (169)
T ss_dssp HHHHHHHHHTTCCT------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHHCcCCC------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCH
Confidence 99999999999884 468899999999999999999999999999997 78999999999999999999
Q ss_pred HHHHHHHHhCCCCccc
Q 037245 182 DIACFIIDQRPDSLDH 197 (215)
Q Consensus 182 ~~~~~Ll~~g~~~~~~ 197 (215)
+++++|+++| +++..
T Consensus 150 ~iv~~Ll~~G-A~ie~ 164 (169)
T 4gpm_A 150 EVVKLLEKQG-GWLEH 164 (169)
T ss_dssp HHHHHHHTC-------
T ss_pred HHHHHHHHCC-CCcCC
Confidence 9999999999 77654
No 4
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=7.4e-38 Score=229.19 Aligned_cols=191 Identities=21% Similarity=0.269 Sum_probs=167.8
Q ss_pred hccHHHHHHHHcCChHHHHHHHhcccC---cccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHH
Q 037245 20 TMDHELLNVLRRGDEHQIRPIAGRMQN---IFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIA 96 (215)
Q Consensus 20 ~~~~~l~~a~~~~~~~~~~~ll~~~~~---~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a 96 (215)
.+.+|||+|+..|+.+++++|++++.+ + +..+..|.||||+|+..|+.+++++|+ +.+++++.++..|.||||+|
T Consensus 8 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~tpL~~A 85 (282)
T 1oy3_D 8 DGDTALHLAVIHQHEPFLDFLLGFSAGHEYL-DLQNDLGQTALHLAAILGEASTVEKLY-AAGAGVLVAERGGHTALHLA 85 (282)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHHHTTSGGG-GCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCSSCCCTTSCCHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcccc-cccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHH
Confidence 344569999999999999999999887 5 788999999999999999999999999 56788899999999999999
Q ss_pred HHhCCHHHHHHHHhhcccccCCCCC-----------------------------------CccccccccCCCCCcHHHHH
Q 037245 97 ARVGDPAIVSTILNYVPAITNGTES-----------------------------------EPESLLRITDDEGNTPLHNA 141 (215)
Q Consensus 97 ~~~~~~~~~~~Ll~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~l~~a 141 (215)
+..|+.+++++|++++++....... .....++..+..|.||||+|
T Consensus 86 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A 165 (282)
T 1oy3_D 86 CRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVA 165 (282)
T ss_dssp TTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHH
T ss_pred HHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHH
Confidence 9999999999999988763221110 12234667888999999999
Q ss_pred HhcCCHHHHHHHHHcCCCCccccc-cCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHHHhCC
Q 037245 142 VRNKHENVVRMLVKKDRIPLGYIN-KAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 142 ~~~~~~~~~~~ll~~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
+..|+.+++++|+++|+++ +..+ ..|.||||+|+..++.+++++|+++| ++++.++..|.||||+|+.+|+
T Consensus 166 ~~~g~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~~~~ 237 (282)
T 1oy3_D 166 VIHKDAEMVRLLRDAGADL-NKPEPTCGRTPLHLAVEAQAASVLELLLKAG-ADPTARMYGGRTPLGSALLRPN 237 (282)
T ss_dssp HHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHTSSC
T ss_pred HHcCCHHHHHHHHHcCCCC-CCCCCCCCcCHHHHHHHcCCHHHHHHHHHcC-CCCcccccCCCCHHHHHHHcCC
Confidence 9999999999999999987 5565 45999999999999999999999999 9999999999999999999886
No 5
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.6e-37 Score=221.57 Aligned_cols=191 Identities=18% Similarity=0.160 Sum_probs=164.6
Q ss_pred ccHHHHHHHHcCChHHHHHHHhc-ccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccc----cccCCCCCCHHHH
Q 037245 21 MDHELLNVLRRGDEHQIRPIAGR-MQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLL----RKHNLKGETPLHI 95 (215)
Q Consensus 21 ~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~----~~~~~~g~t~l~~ 95 (215)
+.+|||.|+..|+.+++++|+++ +.++ +..+..|.||||+|+..|+.+++++|++.+.... +.++..|.||||+
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEV-HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCc-ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 34579999999999999999998 8888 8999999999999999999999999996544322 5567799999999
Q ss_pred HHHhCCHHHHHHHHhhcccccCCCCCC-ccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHH
Q 037245 96 AARVGDPAIVSTILNYVPAITNGTESE-PESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAI 174 (215)
Q Consensus 96 a~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~ 174 (215)
|+..|+.+++++|+++|+++....... .....+..+..|.||||+|+..++.+++++|+++|+++ +.+|..|.||||+
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~ 160 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI-RAQDSLGNTVLHI 160 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHH
Confidence 999999999999999998865432211 11122334568999999999999999999999999987 7899999999999
Q ss_pred HHHcCCHHHH----HHHHHhCCCCc------cccCccCccHHHHHHHhCC
Q 037245 175 AIDSSLTDIA----CFIIDQRPDSL------DHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 175 a~~~~~~~~~----~~Ll~~g~~~~------~~~~~~g~t~l~~A~~~~~ 214 (215)
|+..++.+++ ++|+++| ++. +.++..|.||||+|+.+|+
T Consensus 161 A~~~~~~~~~~~i~~~Ll~~g-~~~~~~~~~~~~~~~g~tpl~~A~~~g~ 209 (232)
T 2rfa_A 161 LILQPNKTFACQMYNLLLSYD-GGDHLKSLELVPNNQGLTPFKLAGVEGN 209 (232)
T ss_dssp HHTCSCHHHHHHHHHHHHHTT-CSCSSCCGGGCCCTTSCCHHHHHHHHTC
T ss_pred HHHcCChHHHHHHHHHHHhcC-CchhhhhhhccCCCCCCCHHHHHHHcCC
Confidence 9999999988 9999999 666 6899999999999999986
No 6
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.9e-37 Score=219.56 Aligned_cols=177 Identities=19% Similarity=0.186 Sum_probs=112.2
Q ss_pred cHHHHHHHHcCChHHHHHHHhcc--cCcccc-cCCCCchHHHHHHHcCCcchHHHHHHhc-cccccccCCCCCCHHHHHH
Q 037245 22 DHELLNVLRRGDEHQIRPIAGRM--QNIFST-MSPRGNTVLHMAIRFRNHKVIPEILRQQ-DSLLRKHNLKGETPLHIAA 97 (215)
Q Consensus 22 ~~~l~~a~~~~~~~~~~~ll~~~--~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~ll~~~-~~~~~~~~~~g~t~l~~a~ 97 (215)
.+|||+|+..|+.+++++|++++ .++ +. .+..|.||||+|+..|+.+++++|++.+ ..+++.++..|.||||+|+
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~ 115 (228)
T 2dzn_A 37 RIPLHWSVSFQAHEITSFLLSKMENVNL-DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAV 115 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTCTTCCG-GGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccccc-cccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHH
Confidence 34466666666666666666666 444 33 5566666666666666666666666322 1455556666666666666
Q ss_pred HhCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHH
Q 037245 98 RVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAID 177 (215)
Q Consensus 98 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~ 177 (215)
..++.+++++|+++|+++ +..+..|.||||+|+..++.+++++|++.|....+..+..|+||||+|+.
T Consensus 116 ~~~~~~~~~~Ll~~g~~~------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~ 183 (228)
T 2dzn_A 116 GKKWFEVSQFLIENGASV------------RIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA 183 (228)
T ss_dssp HTTCHHHHHHHHHTTCCS------------CCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHH
T ss_pred HcCCHhHHHHHHHcCCCc------------cccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHH
Confidence 666666666666666552 34566677777777777777777777776622235666667777777777
Q ss_pred cCCHHHHHHHH-HhCCCCccccCccCccHHHHHHHh
Q 037245 178 SSLTDIACFII-DQRPDSLDHRLPEELTLLHSAVMR 212 (215)
Q Consensus 178 ~~~~~~~~~Ll-~~g~~~~~~~~~~g~t~l~~A~~~ 212 (215)
.++.+++++|+ ++| ++++.+|..|.||+++|+..
T Consensus 184 ~~~~~~v~~Ll~~~g-a~~~~~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 184 EGHGDAAVLLVEKYG-AEYDLVDNKGAKAEDVALNE 218 (228)
T ss_dssp TTCHHHHHHHHHHHC-CCSCCBCTTSCBGGGGCSST
T ss_pred cCCHHHHHHHHHhcC-CCCCccCCCCCcHHHHHHHH
Confidence 77777777777 566 66777777777777766543
No 7
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=8.4e-38 Score=222.79 Aligned_cols=177 Identities=21% Similarity=0.197 Sum_probs=155.9
Q ss_pred ccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhC
Q 037245 21 MDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVG 100 (215)
Q Consensus 21 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 100 (215)
+.+|||.|+..|+.+++++|++++.++ +..+..|.||||+|+..++.+++++|+ ..+.+++.++..|.||||+|+..+
T Consensus 40 g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~ 117 (231)
T 3aji_A 40 SRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAASAGXDEIVKALL-VKGAHVNAVNQNGCTPLHYAASKN 117 (231)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcCCCCCCHHHHHHHcCHHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcC
Confidence 445699999999999999999998888 888888999999999999999999888 556777888888999999999999
Q ss_pred CHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCC
Q 037245 101 DPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSL 180 (215)
Q Consensus 101 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 180 (215)
+.+++++|+++|+++ +..+..|.||||+|+..++.+++++|+++|+++ +.++..|.||||+|+..++
T Consensus 118 ~~~~~~~Ll~~g~~~------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~ 184 (231)
T 3aji_A 118 RHEIAVMLLEGGANP------------DAKDHYDATAMHRAAAKGNLKMVHILLFYKAST-NIQDTEGNTPLHLACDEER 184 (231)
T ss_dssp CHHHHHHHHHTTCCT------------TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTC
T ss_pred CHHHHHHHHHcCCCC------------CCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc-cccCCCCCCHHHHHHHCCC
Confidence 999999999888764 357888999999999999999999999999887 7788899999999999999
Q ss_pred HHHHHHHHHhCCCCccccCccCccHHHHHHHhC
Q 037245 181 TDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQ 213 (215)
Q Consensus 181 ~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~ 213 (215)
.+++++|+++| ++++.++..|.||+++|+..+
T Consensus 185 ~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~ 216 (231)
T 3aji_A 185 VEEAKFLVTQG-ASIYIENKEEKTPLQVAKGGL 216 (231)
T ss_dssp HHHHHHHHHTT-CCSCCCCTTSCCHHHHSCHHH
T ss_pred HHHHHHHHHCC-CCCCCCCCCCCCHHHHHHhhH
Confidence 99999999999 999999999999999997655
No 8
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=224.11 Aligned_cols=186 Identities=15% Similarity=0.159 Sum_probs=110.3
Q ss_pred HHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCH
Q 037245 23 HELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDP 102 (215)
Q Consensus 23 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~ 102 (215)
+|||.|+..|+.+++++|++++.++ +..+..|.||||+|+..|+.+++++|+ +.+.+++.++..|.||||+|+..|+.
T Consensus 5 t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (261)
T 2xai_A 5 SPMHEAAIHGHQLSLRNLISQGWAV-NIITADHVSPLHEACLGGHLSCVKILL-KHGAQVNGVTADWHTPLFNACVSGSW 82 (261)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 3455555555555555555555555 555555555555555555555555555 33445555555555555555555555
Q ss_pred HHHHHHHhhcccccCCCCCC--------------------ccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCcc
Q 037245 103 AIVSTILNYVPAITNGTESE--------------------PESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLG 162 (215)
Q Consensus 103 ~~~~~Ll~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~ 162 (215)
+++++|+++|+++....... .+..++..+..|.||||+|+..++.+++++|+++|+++ +
T Consensus 83 ~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~ 161 (261)
T 2xai_A 83 DCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADV-N 161 (261)
T ss_dssp HHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCT-T
T ss_pred HHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC-C
Confidence 55555555555432211100 11123456666777777777777777777777776665 3
Q ss_pred ccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHHHhC
Q 037245 163 YINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQ 213 (215)
Q Consensus 163 ~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~ 213 (215)
.+..|.||||+|+..++.+++++|+++| ++++.+|..|.||+|+|+.++
T Consensus 162 -~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-ad~~~~d~~g~tpl~~A~~~~ 210 (261)
T 2xai_A 162 -QGKGQDSPLHAVARTASEELACLLMDFG-ADTQAKNAEGKRPVELVPPES 210 (261)
T ss_dssp -CCBTTBCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCGGGGSCTTC
T ss_pred -CCCCCCChHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCChhhhccccc
Confidence 3566677777777777777777777777 677777777777777766543
No 9
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=6.2e-37 Score=219.11 Aligned_cols=186 Identities=20% Similarity=0.218 Sum_probs=112.3
Q ss_pred HHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHH
Q 037245 24 ELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPA 103 (215)
Q Consensus 24 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~ 103 (215)
|||.|+..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|+ ..+..++.++..|.||||+|+..|+.+
T Consensus 14 ~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~ 91 (237)
T 3b7b_A 14 PLHAAAEAGHVDICHMLVQAGANI-DTCSEDQRTPLMEAAENNHLEAVKYLI-KAGALVDPKDAEGSTCLHLAAKKGHYE 91 (237)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHH-TTTCCCCCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCc-CccCCCCCCHHHHHHHhCCHHHHHHHH-hCCCCCCCCCCCCCcHHHHHHHcCCHH
Confidence 355555555555555555555555 555555555555555555555555555 334444555555555555555555555
Q ss_pred HHHHHHhhc-ccccCCCCCC---------------------ccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCc
Q 037245 104 IVSTILNYV-PAITNGTESE---------------------PESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPL 161 (215)
Q Consensus 104 ~~~~Ll~~~-~~~~~~~~~~---------------------~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~ 161 (215)
++++|++++ .++......+ .+..++..+..|.||||+|+..++.+++++|+++|+++
T Consensus 92 ~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~- 170 (237)
T 3b7b_A 92 VVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDL- 170 (237)
T ss_dssp HHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCT-
T ss_pred HHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-
Confidence 555555554 2211110000 11123456667777777777777777777777777765
Q ss_pred cccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHHHhC
Q 037245 162 GYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQ 213 (215)
Q Consensus 162 ~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~ 213 (215)
+..+..|.||||+|+..++.+++++|+++| ++++.++..|.||||+|+.+|
T Consensus 171 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-ad~~~~d~~g~t~l~~A~~~~ 221 (237)
T 3b7b_A 171 HAVNIHGDSPLHIAARENRYDCVVLFLSRD-SDVTLKNKEGETPLQCASLNS 221 (237)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHSCTTC
T ss_pred CCcCCCCCCHHHHHHHhCCHhHHHHHHHcC-CCCCccCCCCCCHHHHHHHHH
Confidence 566777777777777777777777777777 777777777777777777665
No 10
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2e-37 Score=221.67 Aligned_cols=166 Identities=20% Similarity=0.214 Sum_probs=126.4
Q ss_pred cHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCC
Q 037245 22 DHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGD 101 (215)
Q Consensus 22 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 101 (215)
.+|||.|+..|+.+++++|++++.++ +..+..|.||||+|+..++.+++++|++.....++.++..|.||||+|+..++
T Consensus 45 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~ 123 (237)
T 3b7b_A 45 RTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKH 123 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCC
Confidence 34577777777777777777777776 66677777777777777777777777755446666666677777777777777
Q ss_pred HHHHHHHHhhcccccCCCCCC---------------------ccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC
Q 037245 102 PAIVSTILNYVPAITNGTESE---------------------PESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIP 160 (215)
Q Consensus 102 ~~~~~~Ll~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~ 160 (215)
.+++++|+++|+++......+ .+..++..+..|.||||+|+..++.+++++|+++|+++
T Consensus 124 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~ 203 (237)
T 3b7b_A 124 VDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDV 203 (237)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT
T ss_pred HHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCC
Confidence 777777777776654433222 33445678899999999999999999999999999987
Q ss_pred ccccccCCCcHHHHHHHcCCHHHHHHHHH
Q 037245 161 LGYINKAEQTPLAIAIDSSLTDIACFIID 189 (215)
Q Consensus 161 ~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~ 189 (215)
+.++..|.|||++|+..++...+..|++
T Consensus 204 -~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 204 -TLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp -TCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred -CccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999877766654
No 11
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=230.45 Aligned_cols=177 Identities=20% Similarity=0.239 Sum_probs=147.2
Q ss_pred ccHHHHHHHHcCCh-HHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHh
Q 037245 21 MDHELLNVLRRGDE-HQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARV 99 (215)
Q Consensus 21 ~~~~l~~a~~~~~~-~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~ 99 (215)
+.+||+.|+..+.. .+++.|+++|.++ +..|..|.||||+|+..|+.+++++|+ ..+++++.++..|.||++.|+..
T Consensus 52 ~~t~L~~a~~~~~~~~~v~~Ll~~Gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll-~~~a~~~~~~~~g~t~l~~a~~~ 129 (269)
T 4b93_B 52 FCHPLCQCPKCAPAQKRLAKVPASGLGV-NVTSQDGSSPLHVAALHGRADLIPLLL-KHGANAGARNADQAVPLHLACQQ 129 (269)
T ss_dssp -----------------------CCCCT-TCCCTTSCCHHHHHHHTTCTTHHHHHH-HTTCCTTCCCTTCCCHHHHHHHH
T ss_pred CCCHHHHHHHhCCHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHH-hcCCCcCccCCCCCCcccccccc
Confidence 34569999987765 4789999999999 999999999999999999999999999 56778889999999999999999
Q ss_pred CCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcC
Q 037245 100 GDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSS 179 (215)
Q Consensus 100 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 179 (215)
++.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|
T Consensus 130 ~~~~~~~~Ll~~g~~~------------n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadv-n~~~~~g~t~Lh~A~~~g 196 (269)
T 4b93_B 130 GHFQVVKCLLDSNAKP------------NKKDLSGNTPLIYACSGGHHELVALLLQHGASI-NASNNKGNTALHEAVIEK 196 (269)
T ss_dssp TCHHHHHHHHHTTCCS------------CCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCT-TCBCTTSCBHHHHHHHTT
T ss_pred ChHHHHHHHHHCCCCC------------CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC-CccccCCCcHHHHHHHcC
Confidence 9999999999999874 468899999999999999999999999999987 789999999999999999
Q ss_pred CHHHHHHHHHhCCCCccccCccCccHHHHHHHhC
Q 037245 180 LTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQ 213 (215)
Q Consensus 180 ~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~ 213 (215)
+.+++++|+++| ++++.+|..|.||||+|++++
T Consensus 197 ~~~~v~~Ll~~G-ad~~~~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 197 HVFVVELLLLHG-ASVQVLNKRQRTAVDCAEQNS 229 (269)
T ss_dssp CHHHHHHHHHTT-CCSCCCCTTSCCSGGGSCTTC
T ss_pred CHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHhCC
Confidence 999999999999 999999999999999998765
No 12
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=9.6e-38 Score=225.49 Aligned_cols=186 Identities=19% Similarity=0.206 Sum_probs=141.0
Q ss_pred CCcchhhccHHHHHHHHcC-------------ChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccc
Q 037245 14 DQELPATMDHELLNVLRRG-------------DEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDS 80 (215)
Q Consensus 14 ~~~~~~~~~~~l~~a~~~~-------------~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~ 80 (215)
+..+.. +.+|||+|+..| +.+++++|+++++++.+..+..|.||||+|+..|+.+++++|+ +.+.
T Consensus 4 n~~d~~-g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~ 81 (253)
T 1yyh_A 4 NVRGPD-GFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLL-EASA 81 (253)
T ss_dssp -------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHH-HTTC
T ss_pred CCCCCC-CCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHH-HcCC
Confidence 334444 456699999977 8999999999999985566899999999999999999999999 5678
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC
Q 037245 81 LLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIP 160 (215)
Q Consensus 81 ~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~ 160 (215)
+++.++..|.||||+|+..|+.+++++|+++++.. ++..+..|.||||+|+..++.+++++|++.|+++
T Consensus 82 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-----------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 150 (253)
T 1yyh_A 82 DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATD-----------LDARMHDGTTPLILAARLAVEGMLEDLINSHADV 150 (253)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSC-----------TTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCT
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-----------ccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCC
Confidence 88999999999999999999999999999998621 3467889999999999999999999999999987
Q ss_pred ccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHHHhCC
Q 037245 161 LGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 161 ~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
+..+..|.||||+|+..++.+++++|+++| ++++.++..|.||||+|+.+|+
T Consensus 151 -~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpL~~A~~~~~ 202 (253)
T 1yyh_A 151 -NAVDDLGKSALHWAAAVNNVDAAVVLLKNG-ANKDMQNNREETPLFLAAREGS 202 (253)
T ss_dssp -TCBCTTSCBHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTC
T ss_pred -CCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHCCC
Confidence 788999999999999999999999999999 9999999999999999999886
No 13
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=8.8e-37 Score=213.13 Aligned_cols=179 Identities=17% Similarity=0.248 Sum_probs=163.6
Q ss_pred cHHHHHHHHcCChHHHHHHHhccc-CcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhC
Q 037245 22 DHELLNVLRRGDEHQIRPIAGRMQ-NIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVG 100 (215)
Q Consensus 22 ~~~l~~a~~~~~~~~~~~ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 100 (215)
.++|+.|+..|+.+.++.++.++. ++ +..+..|.||||+|+..|+.+++++|+ +.+.+++.++..|.||||+|+..|
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~A~~~~ 83 (201)
T 3hra_A 6 VGALLEAANQRDTKKVKEILQDTTYQV-DEVDTEGNTPLNIAVHNNDIEIAKALI-DRGADINLQNSISDSPYLYAGAQG 83 (201)
T ss_dssp TTHHHHHHHTTCHHHHHHHHTCTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred ccHHHHHHHhccHHHHHHHHHcCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcC
Confidence 346999999999999999999988 66 889999999999999999999999999 567888999999999999999999
Q ss_pred CHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCC
Q 037245 101 DPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSL 180 (215)
Q Consensus 101 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 180 (215)
+.+++++|++.+.. .++..+..|.||||+|+..++.+++++|++++....+..+..|.||||+|+..++
T Consensus 84 ~~~~~~~Ll~~~~~-----------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~ 152 (201)
T 3hra_A 84 RTEILAYMLKHATP-----------DLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLRE 152 (201)
T ss_dssp CHHHHHHHHHHSCC-----------CTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSC
T ss_pred CHHHHHHHHhccCc-----------ccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhcc
Confidence 99999999965532 2446788999999999999999999999999944458899999999999999988
Q ss_pred -----HHHHHHHHHhCCCCccccCccCccHHHHHHHhCC
Q 037245 181 -----TDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 181 -----~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
.+++++|+++| ++++.++..|.||||+|+.+|+
T Consensus 153 ~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~ 190 (201)
T 3hra_A 153 GNQLYQDIVKLLMENG-ADQSIKDNSGRTAMDYANQKGY 190 (201)
T ss_dssp CSHHHHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTC
T ss_pred chhhHHHHHHHHHHCC-CCCCccCCCCCCHHHHHHHcCC
Confidence 99999999999 9999999999999999999886
No 14
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=9.6e-37 Score=217.31 Aligned_cols=178 Identities=20% Similarity=0.248 Sum_probs=166.3
Q ss_pred cHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCC
Q 037245 22 DHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGD 101 (215)
Q Consensus 22 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 101 (215)
+++|+.|+..|+.+.++.++..++...+..+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..|+
T Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~ 85 (231)
T 3aji_A 7 NIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLL-QLGVPVNDKDDAGWSPLHIAASAGX 85 (231)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCSCCCCTTSCCHHHHHHHHTC
T ss_pred cchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHH-HhCCCCCCcCCCCCCHHHHHHHcCH
Confidence 446999999999999999999987766888999999999999999999999999 5577888999999999999999999
Q ss_pred HHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCH
Q 037245 102 PAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLT 181 (215)
Q Consensus 102 ~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~ 181 (215)
.+++++|+++|+++ +..+..|.||||+|+..++.+++++|+++|+++ +..+..|.||||+|+..++.
T Consensus 86 ~~~v~~Ll~~g~~~------------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~ 152 (231)
T 3aji_A 86 DEIVKALLVKGAHV------------NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP-DAKDHYDATAMHRAAAKGNL 152 (231)
T ss_dssp HHHHHHHHHTTCCT------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCH
T ss_pred HHHHHHHHHcCCCC------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCH
Confidence 99999999999774 367889999999999999999999999999987 78899999999999999999
Q ss_pred HHHHHHHHhCCCCccccCccCccHHHHHHHhCC
Q 037245 182 DIACFIIDQRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 182 ~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
+++++|+++| ++++.++..|.||||+|+..|+
T Consensus 153 ~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~ 184 (231)
T 3aji_A 153 KMVHILLFYK-ASTNIQDTEGNTPLHLACDEER 184 (231)
T ss_dssp HHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHhcC-CCccccCCCCCCHHHHHHHCCC
Confidence 9999999999 9999999999999999999886
No 15
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=7.7e-37 Score=221.09 Aligned_cols=190 Identities=17% Similarity=0.114 Sum_probs=158.2
Q ss_pred ccHHHHHHHHcCChH----HHHHHHhcccCcccc----cCCCCchHHHHHHHc---CCcchHHHHHHhcccccc------
Q 037245 21 MDHELLNVLRRGDEH----QIRPIAGRMQNIFST----MSPRGNTVLHMAIRF---RNHKVIPEILRQQDSLLR------ 83 (215)
Q Consensus 21 ~~~~l~~a~~~~~~~----~~~~ll~~~~~~~~~----~~~~g~t~L~~A~~~---~~~~~~~~ll~~~~~~~~------ 83 (215)
+.++||.|+..|+.+ ++++|++++.++ +. .+..|.||||+|+.. |+.+++++|++. +..++
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i-~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~-g~~~~~~~~~~ 79 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYL-TDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQI-DKDSGNPKPLV 79 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCT-TSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHH-HHHTTCSSCGG
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCHHHHHHHccccchHHHHHHHHhc-CCcccchhhhc
Confidence 456899999999997 567777789998 76 899999999999999 999999999954 44433
Q ss_pred -----ccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCC-ccccccccCCCCCcHHHHHHhcCCHHHHHHHHH--
Q 037245 84 -----KHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESE-PESLLRITDDEGNTPLHNAVRNKHENVVRMLVK-- 155 (215)
Q Consensus 84 -----~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~-- 155 (215)
.++..|.||||+|+..|+.+++++|+++|+++....... .....+..+..|.||||+|+..|+.+++++|++
T Consensus 80 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~ 159 (256)
T 2etb_A 80 NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENP 159 (256)
T ss_dssp GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred ccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 234679999999999999999999999998854321100 000011112239999999999999999999999
Q ss_pred -cCCCCccccccCCCcHHHHHHH--cCCHH-------HHHHHHHhCCCCc-------cccCccCccHHHHHHHhCC
Q 037245 156 -KDRIPLGYINKAEQTPLAIAID--SSLTD-------IACFIIDQRPDSL-------DHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 156 -~~~~~~~~~~~~~~t~l~~a~~--~~~~~-------~~~~Ll~~g~~~~-------~~~~~~g~t~l~~A~~~~~ 214 (215)
+|+++ +.++..|+||||+|+. .++.+ ++++|+++| +++ +.+|..|.||||+|+..|+
T Consensus 160 ~~ga~~-n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~g-a~~~~~~~~~~~~d~~g~tpL~~A~~~g~ 233 (256)
T 2etb_A 160 HQPASL-EATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMG-ARLCPTVQLEEISNHQGLTPLKLAAKEGK 233 (256)
T ss_dssp SCCCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-HHHSTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred ccCCCc-CccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcC-CCcccccccccccCCCCCCHHHHHHHhCC
Confidence 88887 7899999999999999 78888 999999999 888 8999999999999999986
No 16
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.8e-36 Score=220.69 Aligned_cols=186 Identities=15% Similarity=0.157 Sum_probs=129.8
Q ss_pred hccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHh
Q 037245 20 TMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARV 99 (215)
Q Consensus 20 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~ 99 (215)
.+.+|||.|+..|+.+++++|++++.++ +..+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..
T Consensus 58 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~t~L~~A~~~ 135 (285)
T 3d9h_A 58 SDWSPMHEAAIHGHQLSLRNLISQGWAV-NIITADHVSPLHEACLGGHLSCVKILL-KHGAQVNGVTADWHTPLFNACVS 135 (285)
T ss_dssp CSCCHHHHHHHTTCHHHHHHHHHTTCCS-CEECTTCCCHHHHHHHTTCHHHHHHHH-HTTCCSSCCCTTCCCHHHHHHHH
T ss_pred cCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHCCcHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHc
Confidence 3445699999999999999999999998 899999999999999999999999999 56788889999999999999999
Q ss_pred CCHHHHHHHHhhcccccCCCCCC--------------------ccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCC
Q 037245 100 GDPAIVSTILNYVPAITNGTESE--------------------PESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRI 159 (215)
Q Consensus 100 ~~~~~~~~Ll~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~ 159 (215)
|+.+++++|+++|+++....... .+..++..+..|.||||+|+..++.+++++|++.|++
T Consensus 136 ~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 215 (285)
T 3d9h_A 136 GSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGAD 215 (285)
T ss_dssp TCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCC
Confidence 99999999999998764321111 2222334444455555555555555555555555444
Q ss_pred CccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHH
Q 037245 160 PLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAV 210 (215)
Q Consensus 160 ~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~ 210 (215)
+ + .+..|.||||+|+..++.+++++|+++| ++++.+|..|.|||++|+
T Consensus 216 ~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-ad~~~~d~~g~t~l~~A~ 263 (285)
T 3d9h_A 216 V-N-QGKGQDSPLHAVVRTASEELACLLMDFG-ADTQAKNAEGKRPVELVP 263 (285)
T ss_dssp T-T-CCBTTBCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCGGGGSC
T ss_pred C-C-CCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHhc
Confidence 3 2 2444555555555555555555555555 555555555555555544
No 17
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=4e-36 Score=215.33 Aligned_cols=178 Identities=18% Similarity=0.259 Sum_probs=88.8
Q ss_pred HHHHHHHcCChHHHHHHHh----cccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHh
Q 037245 24 ELLNVLRRGDEHQIRPIAG----RMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARV 99 (215)
Q Consensus 24 ~l~~a~~~~~~~~~~~ll~----~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~ 99 (215)
|||.|+..|+.+++++|++ .+.++ +..+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..
T Consensus 12 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~A~~~ 89 (241)
T 1k1a_A 12 PLHIAVVQGNLPAVHRLVNLFQQGGREL-DIYNNLRQTPLHLAVITTLPSVVRLLV-TAGASPMALDRHGQTAAHLACEH 89 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCCC-CcccccCCCHHHHHHHcCCHHHHHHHH-HcCCCccccCCCCCCHHHHHHHc
Confidence 4555555555555555554 34444 555555555555555555555555555 33444555555555555555555
Q ss_pred CCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccc-cCCCcHHHHHHHc
Q 037245 100 GDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYIN-KAEQTPLAIAIDS 178 (215)
Q Consensus 100 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~~t~l~~a~~~ 178 (215)
++.+++++|+++++.... .++..+..|.||||+|+..++.+++++|++.|+++ +..+ ..|.||||+|+..
T Consensus 90 ~~~~~~~~Ll~~~~~~~~--------~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~ 160 (241)
T 1k1a_A 90 RSPTCLRALLDSAAPGTL--------DLEARNYDGLTALHVAVNTECQETVQLLLERGADI-DAVDIKSGRSPLIHAVEN 160 (241)
T ss_dssp TCHHHHHHHHHHSCTTSC--------CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTTCCCHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCccc--------cccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCc-ccccccCCCcHHHHHHHc
Confidence 555555555555542100 12233444444444444444444444444444443 2233 3444444444444
Q ss_pred CCHHHHHHHHHhCCCCccccCccCccHHHHHHHhC
Q 037245 179 SLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQ 213 (215)
Q Consensus 179 ~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~ 213 (215)
++.+++++|+++| ++++.++..|.||||+|+..|
T Consensus 161 ~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 194 (241)
T 1k1a_A 161 NSLSMVQLLLQHG-ANVNAQMYSGSSALHSASGRG 194 (241)
T ss_dssp TCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHHT
T ss_pred CCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcC
Confidence 4444444444444 444444444444444444444
No 18
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=6.5e-37 Score=219.41 Aligned_cols=187 Identities=19% Similarity=0.169 Sum_probs=167.9
Q ss_pred CCCCcchhhccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhcc---ccccccCCC
Q 037245 12 TMDQELPATMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQD---SLLRKHNLK 88 (215)
Q Consensus 12 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~---~~~~~~~~~ 88 (215)
.++..+.. +.+|||+|+..|+.+++++|+++|.++ +..+..|.||||+|+..++.+++++|++... ..++.++..
T Consensus 38 ~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 115 (241)
T 1k1a_A 38 ELDIYNNL-RQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYD 115 (241)
T ss_dssp CSCCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTT
T ss_pred CCCccccc-CCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcC
Confidence 33444434 445699999999999999999999998 8889999999999999999999999996543 267788899
Q ss_pred CCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccC-CCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccC
Q 037245 89 GETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITD-DEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKA 167 (215)
Q Consensus 89 g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~ 167 (215)
|.||||+|+..++.+++++|+++|+++. ..+ ..|.||||+|+..++.+++++|+++|+++ +..+..
T Consensus 116 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~ 182 (241)
T 1k1a_A 116 GLTALHVAVNTECQETVQLLLERGADID------------AVDIKSGRSPLIHAVENNSLSMVQLLLQHGANV-NAQMYS 182 (241)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTT------------CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCBCTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCcc------------cccccCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCC
Confidence 9999999999999999999999998754 445 78999999999999999999999999987 788999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHHHhCC
Q 037245 168 EQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 168 ~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
|.||||+|+..++.+++++|+++| ++++.++..|.||+++|+.+|+
T Consensus 183 g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~ 228 (241)
T 1k1a_A 183 GSSALHSASGRGLLPLVRTLVRSG-ADSSLKNCHNDTPLMVARSRRV 228 (241)
T ss_dssp SCBHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCTTTTCSSHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcC-CCCCCcCCCCCCHHHHHHhcCc
Confidence 999999999999999999999999 9999999999999999987764
No 19
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=8.2e-37 Score=231.47 Aligned_cols=180 Identities=18% Similarity=0.218 Sum_probs=142.7
Q ss_pred hccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccc---------------
Q 037245 20 TMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRK--------------- 84 (215)
Q Consensus 20 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~--------------- 84 (215)
.+.++||.|+..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|++.+. .++.
T Consensus 19 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~g~t~L~~A~~~g~ 96 (364)
T 3ljn_A 19 ENMEKIHVAARKGQTDEVRRLIETGVSP-TIQNRFGCTALHLACKFGCVDTAKYLASVGE-VHSLWHGQKPIHLAVMANK 96 (364)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHCCHHHHHHHHHHCC-CCCCBTTBCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCcHHHHHHHcCCHHHHHHHHHCCC-CccccCCCCHHHHHHHcCC
Confidence 3445699999999999999999998888 8888888999999999888888888885432 2221
Q ss_pred -------------------------------------cCCCCCCHHHHHHHhC--CHHHHHHHHhhcccccCCCCCCccc
Q 037245 85 -------------------------------------HNLKGETPLHIAARVG--DPAIVSTILNYVPAITNGTESEPES 125 (215)
Q Consensus 85 -------------------------------------~~~~g~t~l~~a~~~~--~~~~~~~Ll~~~~~~~~~~~~~~~~ 125 (215)
++..|.||||+|+..| +.+++++|+++|++
T Consensus 97 ~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~----------- 165 (364)
T 3ljn_A 97 TDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS----------- 165 (364)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC-----------
T ss_pred HHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC-----------
Confidence 4445566666666666 66666666666555
Q ss_pred cccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC----ccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCcc
Q 037245 126 LLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIP----LGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPE 201 (215)
Q Consensus 126 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~----~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~ 201 (215)
++..+..|.||||+|+..|+.+++++|+++|++. .+..+..|.||||+|+..|+.+++++|+++| ++++.++..
T Consensus 166 -~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-ad~~~~d~~ 243 (364)
T 3ljn_A 166 -PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMG-IDVNMEDNE 243 (364)
T ss_dssp -TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTT-CCTTCCCTT
T ss_pred -CcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCC
Confidence 4467888899999999999999999999888772 2678888999999999999999999999998 889999999
Q ss_pred CccHHHHHHHhCC
Q 037245 202 ELTLLHSAVMRQN 214 (215)
Q Consensus 202 g~t~l~~A~~~~~ 214 (215)
|.||||+|+..|+
T Consensus 244 g~tpL~~A~~~g~ 256 (364)
T 3ljn_A 244 HTVPLYLSVRAAM 256 (364)
T ss_dssp SCCHHHHHHHTCC
T ss_pred CCCHHHHHHHhCh
Confidence 9999999988875
No 20
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=9.7e-37 Score=216.84 Aligned_cols=182 Identities=19% Similarity=0.249 Sum_probs=164.7
Q ss_pred cHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhc-cccccc-cCCCCCCHHHHHHHh
Q 037245 22 DHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQ-DSLLRK-HNLKGETPLHIAARV 99 (215)
Q Consensus 22 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~-~~~~~~-~~~~g~t~l~~a~~~ 99 (215)
.+|||.|+..|+.+++++|+++++++.+..+..|.||||+|+..|+.+++++|++.+ ...++. .+..|.||||+|+..
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~ 82 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSV 82 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHH
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHc
Confidence 457999999999999999999999885668999999999999999999999999654 144444 788999999999999
Q ss_pred CCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcC
Q 037245 100 GDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSS 179 (215)
Q Consensus 100 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 179 (215)
|+.+++++|+++|+... ++..+..|.||||+|+..++.+++++|+++|+++ +..+..|.||||+|+..+
T Consensus 83 ~~~~~~~~Ll~~g~~~~----------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 151 (228)
T 2dzn_A 83 GNLEVVKSLYDRPLKPD----------LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASV-RIKDKFNQIPLHRAASVG 151 (228)
T ss_dssp CCHHHHHHHHSSSSCCC----------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHHhCCCCcc----------cccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCc-cccCCCCCCHHHHHHHcC
Confidence 99999999999983211 3467889999999999999999999999999987 788999999999999999
Q ss_pred CHHHHHHHHHhCCCCccccCccCccHHHHHHHhCC
Q 037245 180 LTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 180 ~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
+.+++++|+++|+++++.++..|.||||+|+..|+
T Consensus 152 ~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~ 186 (228)
T 2dzn_A 152 SLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGH 186 (228)
T ss_dssp CHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTC
T ss_pred CHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCC
Confidence 99999999999989999999999999999999886
No 21
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1e-36 Score=223.08 Aligned_cols=178 Identities=22% Similarity=0.248 Sum_probs=150.1
Q ss_pred ccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhcc---------------------
Q 037245 21 MDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQD--------------------- 79 (215)
Q Consensus 21 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~--------------------- 79 (215)
+.+|||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..++.+++++|++...
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (282)
T 1oy3_D 45 GQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDT 123 (282)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC---------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcch
Confidence 445699999999999999999999999 8999999999999999999999999995331
Q ss_pred -------------------------ccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccC-CC
Q 037245 80 -------------------------SLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITD-DE 133 (215)
Q Consensus 80 -------------------------~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~-~~ 133 (215)
..++.++..|.||||+|+..|+.+++++|+++|+++. ..+ ..
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~------------~~~~~~ 191 (282)
T 1oy3_D 124 SHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLN------------KPEPTC 191 (282)
T ss_dssp --------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT------------CCCTTT
T ss_pred hcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCC------------CCCCCC
Confidence 2366788899999999999999999999999998854 445 45
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHHHhC
Q 037245 134 GNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQ 213 (215)
Q Consensus 134 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~ 213 (215)
|+||||+|+..++.+++++|+++|+++ +.++..|.||||+|+..++.+++++|+++| ++++.++..|.|||++|....
T Consensus 192 g~tpL~~A~~~~~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 192 GRTPLHLAVEAQAASVLELLLKAGADP-TARMYGGRTPLGSALLRPNPILARLLRAHG-APEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHTSSCHHHHHHHHHTT-CCCCCCC--------------
T ss_pred CcCHHHHHHHcCCHHHHHHHHHcCCCC-cccccCCCCHHHHHHHcCCcHHHHHHHHcC-CCcCcCCCcccccccccCCcc
Confidence 999999999999999999999999997 789999999999999999999999999999 999999999999999997654
No 22
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1e-36 Score=225.06 Aligned_cols=190 Identities=17% Similarity=0.159 Sum_probs=167.5
Q ss_pred hhccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHH
Q 037245 19 ATMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAAR 98 (215)
Q Consensus 19 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~ 98 (215)
..+.++|+.|+..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|+ ..+++++.++..|.||||+|+.
T Consensus 38 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~tpL~~A~~ 115 (299)
T 1s70_B 38 FDDGAVFLAACSSGDTEEVLRLLERGADI-NYANVDGLTALHQACIDDNVDMVKFLV-ENGANINQPDNEGWIPLHAAAS 115 (299)
T ss_dssp ECHHHHHHHHHHHTCHHHHHHHHHHCCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHH
T ss_pred cCCccHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHH
Confidence 34457899999999999999999999998 899999999999999999999999999 5678899999999999999999
Q ss_pred hCCHHHHHHHHhhcccccCCCCCCcccc------------------------------------------------cccc
Q 037245 99 VGDPAIVSTILNYVPAITNGTESEPESL------------------------------------------------LRIT 130 (215)
Q Consensus 99 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~------------------------------------------------~~~~ 130 (215)
.|+.+++++|+++|+++......+...+ ....
T Consensus 116 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 195 (299)
T 1s70_B 116 CGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRH 195 (299)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC
T ss_pred cCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhh
Confidence 9999999999999988755433331110 0123
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHH
Q 037245 131 DDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAV 210 (215)
Q Consensus 131 ~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~ 210 (215)
+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|+++| ++++.+|..|.|||++|+
T Consensus 196 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-ad~~~~d~~g~t~l~~A~ 273 (299)
T 1s70_B 196 AKSGGTALHVAAAKGYTEVLKLLIQARYDV-NIKDYDGWTPLHAAAHWGKEEACRILVENL-CDMEAVNKVGQTAFDVAD 273 (299)
T ss_dssp TTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCTTTSCC
T ss_pred cCCCCCHHHHHHHCCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHhcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHH
Confidence 467999999999999999999999999887 789999999999999999999999999999 999999999999999986
Q ss_pred Hh
Q 037245 211 MR 212 (215)
Q Consensus 211 ~~ 212 (215)
+.
T Consensus 274 ~~ 275 (299)
T 1s70_B 274 ED 275 (299)
T ss_dssp SG
T ss_pred HH
Confidence 53
No 23
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=220.19 Aligned_cols=185 Identities=15% Similarity=0.158 Sum_probs=132.3
Q ss_pred cHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCC
Q 037245 22 DHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGD 101 (215)
Q Consensus 22 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 101 (215)
.+|||.|+..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|++ .+.+++. +..|.||||+|+..|+
T Consensus 37 ~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~-~~~g~t~L~~A~~~~~ 113 (261)
T 2xai_A 37 VSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGSWDCVNLLLQ-HGASVQP-ESDLASPIHEAARRGH 113 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCSSC-SCTTCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCC-CCCCCCHHHHHHHcCc
Confidence 34577777777777777777777776 6667777777777777777777777763 3333332 2345566666666666
Q ss_pred HHHHHHHHhhcccccCCCCCC---------------------ccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC
Q 037245 102 PAIVSTILNYVPAITNGTESE---------------------PESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIP 160 (215)
Q Consensus 102 ~~~~~~Ll~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~ 160 (215)
.+++++|+++|+++......+ .+..++. +..|.||||+|+..++.+++++|+++|+++
T Consensus 114 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~ 192 (261)
T 2xai_A 114 VECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADT 192 (261)
T ss_dssp HHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCC
Confidence 666666666655543332222 1222333 778999999999999999999999999997
Q ss_pred ccccccCCCcHHHHHHHcCCHHHHHHHHHhCC-------CCccccCccCccHHHHHHHhC
Q 037245 161 LGYINKAEQTPLAIAIDSSLTDIACFIIDQRP-------DSLDHRLPEELTLLHSAVMRQ 213 (215)
Q Consensus 161 ~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~-------~~~~~~~~~g~t~l~~A~~~~ 213 (215)
+.+|..|+||+++|+..+ +++++|++++. +.+++++..|.|++|.|....
T Consensus 193 -~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~ 249 (261)
T 2xai_A 193 -QAKNAEGKRPVELVPPES--PLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLV 249 (261)
T ss_dssp -TCCCTTSCCGGGGSCTTC--THHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSS
T ss_pred -CCcCCCCCChhhhccccc--cHHHHHHhccCCccHHHHHHHHHHHHhchhccccCcccC
Confidence 789999999999999654 58999999872 246688999999999987643
No 24
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-35 Score=216.79 Aligned_cols=193 Identities=14% Similarity=0.123 Sum_probs=160.6
Q ss_pred hhhccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHH
Q 037245 18 PATMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAA 97 (215)
Q Consensus 18 ~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~ 97 (215)
...+.+|||.|+..|+.+++++|++++.++ +..+..|.||||+|+..|+.+++++|+ ..+..++.++..|.||||+|+
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~ 113 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFLLAAIAGSVKLLKLFL-SKGADVNECDFYGFTAFMEAA 113 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCTTCBCTTCCBHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCcccCCHHHHHH
Confidence 344556799999999999999999999998 888999999999999999999999999 567778888999999999999
Q ss_pred HhCCHHHHHHHHhhcccccCCCCC----------C----------------------ccccccccCCCCCcHHHHHHhcC
Q 037245 98 RVGDPAIVSTILNYVPAITNGTES----------E----------------------PESLLRITDDEGNTPLHNAVRNK 145 (215)
Q Consensus 98 ~~~~~~~~~~Ll~~~~~~~~~~~~----------~----------------------~~~~~~~~~~~~~~~l~~a~~~~ 145 (215)
..|+.+++++|+++|+++...... + .+..++..+..|.||||+|+..+
T Consensus 114 ~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 193 (285)
T 1wdy_A 114 VYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSS 193 (285)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCS
T ss_pred HhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcc
Confidence 999999999999999876543211 1 14455667778888888888888
Q ss_pred C----HHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHH-hCCCCccccCccCccHHHHHHHhCC
Q 037245 146 H----ENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIID-QRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 146 ~----~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~-~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
+ .+++++|+++|+++ +.++..|.||||+|+..++.+++++|++ .| ++++.++..|.||||+|+.+|+
T Consensus 194 ~~~~~~~i~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g-~~~~~~~~~g~t~l~~A~~~~~ 265 (285)
T 1wdy_A 194 DDSDVEAITHLLLDHGADV-NVRGERGKTPLILAVEKKHLGLVQRLLEQEH-IEINDTDSDGKTALLLAVELKL 265 (285)
T ss_dssp CTTTHHHHHHHHHHTTCCS-SCCCTTSCCHHHHHHHTTCHHHHHHHHHSSS-CCTTCCCTTSCCHHHHHHHTTC
T ss_pred ccchHHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHhccC-CCccccCCCCCcHHHHHHHcCc
Confidence 7 78888888888876 6778888888888888888888888888 56 8888888888888888888775
No 25
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.8e-36 Score=222.31 Aligned_cols=183 Identities=13% Similarity=0.089 Sum_probs=163.4
Q ss_pred CCCCcchhhccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCC
Q 037245 12 TMDQELPATMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGET 91 (215)
Q Consensus 12 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t 91 (215)
.++..+..+. +|||+|+..|+.+++++|+++|+++ +.. .|.||||+|+..|+.+++++|+ ..+.+++.++..|.|
T Consensus 23 ~~~~~d~~g~-t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~--~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~d~~g~t 97 (285)
T 3kea_A 23 DTFKADVHGH-SASYYAIADNNVRLVCTLLNAGALK-NLL--ENEFPLHQAATLEDTKIVKILL-FSGLDDSQFDDKGNT 97 (285)
T ss_dssp TTTCCCTTSC-CHHHHHHHTTCHHHHHHHHHTTGGG-SCC--TTCCHHHHHTTSSSCHHHHHHH-HTTCCTTCCCTTSCC
T ss_pred CCCccCCCCC-CHHHHHHHcCCHHHHHHHHhCCCCC-CCC--CCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCcCCCCCc
Confidence 3444454444 5699999999999999999999998 665 4899999999999999999999 567888999999999
Q ss_pred HHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCCC-CcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCc
Q 037245 92 PLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEG-NTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQT 170 (215)
Q Consensus 92 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t 170 (215)
|||+|+..|+.+++++|+++|+++ +..+..| .||||+|+..++.+++++|+++|+.... ...|.|
T Consensus 98 ~L~~A~~~g~~~~v~~Ll~~ga~~------------~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~g~t 163 (285)
T 3kea_A 98 ALYYAVDSGNMQTVKLFVKKNWRL------------MFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD--LAILLS 163 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHHCGGG------------GGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCC--CSTHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcCCCC------------CccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccc--ccCCcc
Confidence 999999999999999999999884 4678888 7999999999999999999999987622 128899
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCCCccccCccCccH-HHHHHHhCC
Q 037245 171 PLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTL-LHSAVMRQN 214 (215)
Q Consensus 171 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~-l~~A~~~~~ 214 (215)
|||+|+..|+.+++++|+++| ++++.++..|.|| ||+|+.+|+
T Consensus 164 ~L~~A~~~g~~~~v~~Ll~~g-ad~n~~~~~g~t~~L~~A~~~~~ 207 (285)
T 3kea_A 164 CIHITIKNGHVDMMILLLDYM-TSTNTNNSLLFIPDIKLAIDNKD 207 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH-HHTCTTCCCBCCTTHHHHHHHTC
T ss_pred HHHHHHHcChHHHHHHHHHcC-CCCCcccCCCCChHHHHHHHcCC
Confidence 999999999999999999999 9999999999998 999999886
No 26
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=9.4e-38 Score=223.31 Aligned_cols=184 Identities=18% Similarity=0.191 Sum_probs=149.1
Q ss_pred ccHHHHHHHHcCChHHHHHHHhccc----CcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHH
Q 037245 21 MDHELLNVLRRGDEHQIRPIAGRMQ----NIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIA 96 (215)
Q Consensus 21 ~~~~l~~a~~~~~~~~~~~ll~~~~----~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a 96 (215)
+.+|||.|+..|+.+++++|++.+. ++ +..+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|
T Consensus 8 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A 85 (236)
T 1ikn_D 8 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFL-NFQNNLQQTPLHLAVITNQPEIAEALL-GAGCDPELRDFRGNTPLHLA 85 (236)
T ss_dssp CCCTTHHHHHTTCSSSSSCCCC-----CCCC-CCCCTTCCCHHHHHHHTTCHHHHHCCC-SCCCCSCCCCTTCCCHHHHH
T ss_pred CCchhHHHHHcCChhHHHHHHHHhhccHHHh-hccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHH
Confidence 4456889999998888888888765 45 777888889999999888999998888 56777888888888999999
Q ss_pred HHhCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCcccccc-CCCcHHHHH
Q 037245 97 ARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINK-AEQTPLAIA 175 (215)
Q Consensus 97 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-~~~t~l~~a 175 (215)
+..|+.+++++|++++++... ...++..+..|.||||+|+..++.+++++|+++|+++ +..+. .|.||||+|
T Consensus 86 ~~~~~~~~v~~Ll~~~~~~~~------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A 158 (236)
T 1ikn_D 86 CEQGCLASVGVLTQSCTTPHL------HSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADV-NAQEPCNGRTALHLA 158 (236)
T ss_dssp HHHTCHHHHHHHHHSTTTTSS------SCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHH
T ss_pred HHcCCHHHHHHHHhcccchhH------HHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCCHHHHH
Confidence 999999999999888765321 1224567778889999999888899999999888887 56666 888999999
Q ss_pred HHcCCHHHHHHHHHhCCCCccccCccCccHHHHHHHhCC
Q 037245 176 IDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 176 ~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
+..++.+++++|+++| ++++.++..|.|||++|+.+|+
T Consensus 159 ~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~ 196 (236)
T 1ikn_D 159 VDLQNPDLVSLLLKCG-ADVNRVTYQGYSPYQLTWGRPS 196 (236)
T ss_dssp HHTTCHHHHHHHHTTT-CCSCCCCTTCCCGGGGCTTSSC
T ss_pred HHcCCHHHHHHHHHcC-CCCCcccCCCCCHHHHHHccCc
Confidence 9988999999999888 8888888889999988887765
No 27
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=3.3e-35 Score=221.26 Aligned_cols=101 Identities=17% Similarity=0.105 Sum_probs=90.6
Q ss_pred CCcchhhccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHH
Q 037245 14 DQELPATMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPL 93 (215)
Q Consensus 14 ~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l 93 (215)
+..+.. +.+|||+|+..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.|||
T Consensus 52 ~~~d~~-g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~iv~~Ll-~~g~~~~~~~~~g~t~L 128 (351)
T 3utm_A 52 HASDGR-KSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDKGGLVPLHNACSYGHYEVTELLL-KHGACVNAMDLWQFTPL 128 (351)
T ss_dssp CCSSTT-CCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHH
T ss_pred ccCCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHCCCHHHHHHHH-HCCCCCCCCCCCCCCHH
Confidence 333433 445699999999999999999999998 999999999999999999999999999 56788889999999999
Q ss_pred HHHHHhCCHHHHHHHHhhcccccC
Q 037245 94 HIAARVGDPAIVSTILNYVPAITN 117 (215)
Q Consensus 94 ~~a~~~~~~~~~~~Ll~~~~~~~~ 117 (215)
|+|+..|+.+++++|+++|+++..
T Consensus 129 ~~A~~~~~~~~v~~Ll~~g~~~~~ 152 (351)
T 3utm_A 129 HEAASKNRVEVCSLLLSHGADPTL 152 (351)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcc
Confidence 999999999999999999988654
No 28
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.8e-35 Score=224.73 Aligned_cols=195 Identities=14% Similarity=0.146 Sum_probs=170.4
Q ss_pred CCCcchhhccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhcc--ccccccCCCCC
Q 037245 13 MDQELPATMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQD--SLLRKHNLKGE 90 (215)
Q Consensus 13 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~--~~~~~~~~~g~ 90 (215)
++..+.. +.+|||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++... ..++..+..|.
T Consensus 159 vn~~d~~-g~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~ 236 (373)
T 2fo1_E 159 VNAMDCD-ENTPLMLAVLARRRRLVAYLMKAGADP-TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGM 236 (373)
T ss_dssp TTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSC
T ss_pred CcCCCCC-CCCHHHHHHHcChHHHHHHHHHCCCCC-cccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCC
Confidence 3334433 445699999999999999999999999 8999999999999999999999999995432 67888999999
Q ss_pred CHHHHHHHhC---CHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccC
Q 037245 91 TPLHIAARVG---DPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKA 167 (215)
Q Consensus 91 t~l~~a~~~~---~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~ 167 (215)
||||+|+..+ +.+++++|+++|+++.... ....+..+..|.||||+|+..|+.+++++|++++....+..+..
T Consensus 237 t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~----~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~ 312 (373)
T 2fo1_E 237 TALMIVAHNEGRDQVASAKLLVEKGAKVDYDG----AARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDED 312 (373)
T ss_dssp CHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCS----GGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTT
T ss_pred CHHHHHHHhCCcchHHHHHHHHHCCCCccccc----ccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCC
Confidence 9999999998 8999999999998865321 11233467799999999999999999999999874444889999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHHHhCC
Q 037245 168 EQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 168 ~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
|.||||+|+..|+.+++++|+++| ++++.+|..|.|||++|+.+|+
T Consensus 313 g~TpL~~A~~~g~~~iv~~Ll~~g-ad~~~~d~~g~t~l~~A~~~g~ 358 (373)
T 2fo1_E 313 GKTPIMLAAQEGRIEVVMYLIQQG-ASVEAVDATDHTARQLAQANNH 358 (373)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTT-CCSSCCCSSSCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC-CCccCCCCCCCCHHHHHHHcCC
Confidence 999999999999999999999999 9999999999999999999886
No 29
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.9e-36 Score=217.30 Aligned_cols=178 Identities=20% Similarity=0.284 Sum_probs=138.2
Q ss_pred cHHHHHHHHcCChHHHHHHHhcccCc-------ccccCCCCchHHHHHHHcCCcc-hHHHHHHhccccccccCCCCCCHH
Q 037245 22 DHELLNVLRRGDEHQIRPIAGRMQNI-------FSTMSPRGNTVLHMAIRFRNHK-VIPEILRQQDSLLRKHNLKGETPL 93 (215)
Q Consensus 22 ~~~l~~a~~~~~~~~~~~ll~~~~~~-------~~~~~~~g~t~L~~A~~~~~~~-~~~~ll~~~~~~~~~~~~~g~t~l 93 (215)
.++|+.|+..|+.+++++|++.+.+. .+..+..+.|||+.|+..+..+ ++++|+ ..+++++.+|.+|.|||
T Consensus 12 ~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll-~~Gadvn~~d~~G~TpL 90 (269)
T 4b93_B 12 VEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVP-ASGLGVNVTSQDGSSPL 90 (269)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTCC-----------------------------------------CCCCTTCCCTTSCCHH
T ss_pred hhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHH-HCCCCCCCcCCCCCCHH
Confidence 35699999999999999999988653 2556778999999999877764 677777 67888999999999999
Q ss_pred HHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHH
Q 037245 94 HIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLA 173 (215)
Q Consensus 94 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~ 173 (215)
|+|+..|+.+++++|+++++++. ..+..|.||++.|+..++.+++++|++.|+++ +.++..|+||||
T Consensus 91 h~A~~~g~~~~v~~Ll~~~a~~~------------~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n~~d~~g~TpL~ 157 (269)
T 4b93_B 91 HVAALHGRADLIPLLLKHGANAG------------ARNADQAVPLHLACQQGHFQVVKCLLDSNAKP-NKKDLSGNTPLI 157 (269)
T ss_dssp HHHHHTTCTTHHHHHHHTTCCTT------------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHH
T ss_pred HHHHHcCcHHHHHHHHhcCCCcC------------ccCCCCCCccccccccChHHHHHHHHHCCCCC-CCCCCCCCCHHH
Confidence 99999999999999999998744 67889999999999999999999999999987 789999999999
Q ss_pred HHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHHHhCC
Q 037245 174 IAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 174 ~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
+|+..|+.+++++|+++| ++++.++..|.||||+|+.+|+
T Consensus 158 ~A~~~g~~~~v~~Ll~~g-advn~~~~~g~t~Lh~A~~~g~ 197 (269)
T 4b93_B 158 YACSGGHHELVALLLQHG-ASINASNNKGNTALHEAVIEKH 197 (269)
T ss_dssp HHHHTTCGGGHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTC
T ss_pred HHHHCCCHHHHHHHHHCC-CCCCccccCCCcHHHHHHHcCC
Confidence 999999999999999999 9999999999999999999986
No 30
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=217.45 Aligned_cols=169 Identities=16% Similarity=0.203 Sum_probs=113.5
Q ss_pred cHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCC
Q 037245 22 DHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGD 101 (215)
Q Consensus 22 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 101 (215)
.+|||+|+..|+.+++++|++++.++ +..+..|.||||+|+..++.+++++|++ .+..++.. ..|.||||+|+..|+
T Consensus 93 ~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~-~~g~t~L~~A~~~g~ 169 (285)
T 3d9h_A 93 VSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGSWDCVNLLLQ-HGASVQPE-SDLASPIHEAARRGH 169 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCSSCS-CTTSCHHHHHHHHTC
T ss_pred CCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCHHHHHHHHHH-CCCCCCCC-CCCCCHHHHHHHcCC
Confidence 34577777777777777777777776 6666667777777777777666666663 33333322 235555555555555
Q ss_pred HHHHHHHHhhcccccCCCCCC---------------------ccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC
Q 037245 102 PAIVSTILNYVPAITNGTESE---------------------PESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIP 160 (215)
Q Consensus 102 ~~~~~~Ll~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~ 160 (215)
.+++++|+++|+++......+ .+..++ .+..|.||||+|+..++.+++++|+++|+++
T Consensus 170 ~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~ 248 (285)
T 3d9h_A 170 VECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN-QGKGQDSPLHAVVRTASEELACLLMDFGADT 248 (285)
T ss_dssp HHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBTTBCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 555555555555443322222 122233 3778999999999999999999999999987
Q ss_pred ccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccc
Q 037245 161 LGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDH 197 (215)
Q Consensus 161 ~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~ 197 (215)
+.+|..|+|||++|+ ++.+++++|+++..+++..
T Consensus 249 -~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~l~~ 282 (285)
T 3d9h_A 249 -QAKNAEGKRPVELVP--PESPLAQLFLEREGASLPK 282 (285)
T ss_dssp -TCCCTTSCCGGGGSC--TTSHHHHHHHHHC------
T ss_pred -CCcCCCCCCHHHHhc--CccHHHHHHHHhhccCCCC
Confidence 789999999999999 4579999999994366554
No 31
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=1.3e-35 Score=202.35 Aligned_cols=169 Identities=21% Similarity=0.191 Sum_probs=150.9
Q ss_pred cHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCC
Q 037245 22 DHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGD 101 (215)
Q Consensus 22 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 101 (215)
.++||.|+..|+.+.++.|+++++...+..+..|.||||+|+..++.+++++|+ +.+.+++.++..|.||||+|+..++
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLL-EWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCchhhcccCCCHHHHHHHCCC
Confidence 346999999999999999999998855888999999999999999999999999 5677888999999999999999999
Q ss_pred HHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCH
Q 037245 102 PAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLT 181 (215)
Q Consensus 102 ~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~ 181 (215)
.+++++|+++|+++ +..+..|.||||+|+..++.+++++|+++|+++ +.++..|.|||++|+..++.
T Consensus 82 ~~~v~~Ll~~g~~~------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~ 148 (172)
T 3v30_A 82 TDIVGLLLERDVDI------------NIYDWNGGTPLLYAVRGNHVKCVEALLARGADL-TTEADSGYTPMDLAVALGYR 148 (172)
T ss_dssp HHHHHHHHTTTCCT------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCH
T ss_pred HHHHHHHHHcCCCC------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHhCcH
Confidence 99999999999774 467889999999999999999999999999987 78999999999999999999
Q ss_pred HHHHHHHHhCCCCccccCccCccH
Q 037245 182 DIACFIIDQRPDSLDHRLPEELTL 205 (215)
Q Consensus 182 ~~~~~Ll~~g~~~~~~~~~~g~t~ 205 (215)
+++++|++++ +++..++..|.||
T Consensus 149 ~~~~~L~~~~-~~~~~~~~~~~~p 171 (172)
T 3v30_A 149 KVQQVIENHI-LKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHHHHHH-HHHSCC-------
T ss_pred HHHHHHHHHH-HHHhcccCCCCCC
Confidence 9999999999 8888888888776
No 32
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=8.6e-35 Score=225.32 Aligned_cols=174 Identities=21% Similarity=0.222 Sum_probs=117.0
Q ss_pred HHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHH
Q 037245 25 LLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAI 104 (215)
Q Consensus 25 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 104 (215)
||.|+..|+.+++++|++.+.++ +..+..|.||||+|+..|+.+++++|+ ..+.+++..+..|.||||+|+..|+.++
T Consensus 216 L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 293 (437)
T 1n11_A 216 LHIAAKQNQVEVARSLLQYGGSA-NAESVQGVTPLHLAAQEGHAEMVALLL-SKQANGNLGNKSGLTPLHLVAQEGHVPV 293 (437)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHH-TTTCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHH-hcCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 44444444444444444444444 444444444444444444444444444 2333444444444455555555555555
Q ss_pred HHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHH
Q 037245 105 VSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIA 184 (215)
Q Consensus 105 ~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~ 184 (215)
+++|+++|++ ++..+..|+||||+|+..|+.+++++|+++|+++ +.++..|.||||+|+..|+.+++
T Consensus 294 ~~~Ll~~g~~------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~-n~~~~~g~t~L~~A~~~g~~~iv 360 (437)
T 1n11_A 294 ADVLIKHGVM------------VDATTRMGYTPLHVASHYGNIKLVKFLLQHQADV-NAKTKLGYSPLHQAAQQGHTDIV 360 (437)
T ss_dssp HHHHHHHTCC------------TTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHhCCcc------------CCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHCChHHHH
Confidence 5555544443 4567888999999999999999999999998887 77888899999999999999999
Q ss_pred HHHHHhCCCCccccCccCccHHHHHHHhCC
Q 037245 185 CFIIDQRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 185 ~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
++|+++| ++++.++..|.||+++|++.|+
T Consensus 361 ~~Ll~~g-a~~~~~~~~g~t~l~~A~~~g~ 389 (437)
T 1n11_A 361 TLLLKNG-ASPNEVSSDGTTPLAIAKRLGY 389 (437)
T ss_dssp HHHHHTT-CCSCCCCSSSCCHHHHHHHTTC
T ss_pred HHHHHCc-CCCCCCCCCCCCHHHHHHHcCc
Confidence 9999999 8899999999999999988774
No 33
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.2e-35 Score=225.74 Aligned_cols=190 Identities=24% Similarity=0.267 Sum_probs=126.0
Q ss_pred ccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhC
Q 037245 21 MDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVG 100 (215)
Q Consensus 21 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 100 (215)
+.+|||.|+..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..|
T Consensus 14 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~~~~~~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~g 91 (437)
T 1n11_A 14 GLTPLHVASFMGHLPIVKNLLQRGASP-NVSNVKVETPLHMAARAGHTEVAKYLL-QNKAKVNAKAKDDQTPLHCAARIG 91 (437)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCS-CCSSSCCCCHHHHHHHHTCHHHHHHHH-HHTCCSSCCCTTSCCHHHHHHHHT
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHH-hCCCCCCCCCCCCCCHHHHHHHCC
Confidence 445699999999999999999998888 888888999999999999999999998 456778888888999999999999
Q ss_pred CHHHHHHHHhhcccccCCCCCC---------------------ccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCC
Q 037245 101 DPAIVSTILNYVPAITNGTESE---------------------PESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRI 159 (215)
Q Consensus 101 ~~~~~~~Ll~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~ 159 (215)
+.+++++|+++|+++......+ .+...+..+..|.||||+|+..|+.+++++|+++++.
T Consensus 92 ~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 171 (437)
T 1n11_A 92 HTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAH 171 (437)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC
Confidence 9999999999887754322111 1111223344445555555555555555555555544
Q ss_pred CccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHHHhCC
Q 037245 160 PLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 160 ~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
+ +..+..|.||||+|+..++.+++++|+++| .+++.++..|.||||+|+..|+
T Consensus 172 ~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~ 224 (437)
T 1n11_A 172 P-NAAGKNGLTPLHVAVHHNNLDIVKLLLPRG-GSPHSPAWNGYTPLHIAAKQNQ 224 (437)
T ss_dssp T-TCCCSSCCCHHHHHHHTTCHHHHHHHGGGT-CCSCCCCTTCCCHHHHHHHTTC
T ss_pred C-CCCCCCCCCHHHHHHHcCCHHHHHHHHhCC-CCCCCcCCCCCCHHHHHHHcCC
Confidence 4 344445555555555555555555555555 4455555555555555555443
No 34
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.3e-34 Score=210.71 Aligned_cols=191 Identities=18% Similarity=0.230 Sum_probs=134.9
Q ss_pred hccHHHHHHHHcCChHHHHHHHhcccCccccc-CCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHH
Q 037245 20 TMDHELLNVLRRGDEHQIRPIAGRMQNIFSTM-SPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAAR 98 (215)
Q Consensus 20 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~ 98 (215)
.+.++|+.|+..|+.+++++|+++++++ +.. +..|.||||+|+..|+.+++++|+ +.+.+++.++..|.||||+|+.
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~ 81 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGGANV-NFQEEEGGWTPLHNAVQMSREDIVELLL-RHGADPVLRKKNGATPFLLAAI 81 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCc-ccccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHH
Confidence 3567899999999999999999999998 555 888999999999999999999999 5677888899999999999999
Q ss_pred hCCHHHHHHHHhhcccccCCCCCC---------------------cccccccc----------CCCCCcHHHHHHhcCCH
Q 037245 99 VGDPAIVSTILNYVPAITNGTESE---------------------PESLLRIT----------DDEGNTPLHNAVRNKHE 147 (215)
Q Consensus 99 ~~~~~~~~~Ll~~~~~~~~~~~~~---------------------~~~~~~~~----------~~~~~~~l~~a~~~~~~ 147 (215)
.|+.+++++|+++|+++......+ .+..++.. +..|.||||.|+..++.
T Consensus 82 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 161 (285)
T 1wdy_A 82 AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV 161 (285)
T ss_dssp HTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCH
T ss_pred cCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCH
Confidence 999999999999998754322211 11111111 34455555555555555
Q ss_pred HHHHHHHHc-CCCCccccccCCCcHHHHHHHcCC----HHHHHHHHHhCCCCccccCccCccHHHHHHHhCC
Q 037245 148 NVVRMLVKK-DRIPLGYINKAEQTPLAIAIDSSL----TDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 148 ~~~~~ll~~-~~~~~~~~~~~~~t~l~~a~~~~~----~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
+++++|++. |.++ +..+..|.||||.|+..++ .+++++|+++| ++++.++..|.||||+|+.+|+
T Consensus 162 ~~v~~Ll~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~ 231 (285)
T 1wdy_A 162 EVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLDHG-ADVNVRGERGKTPLILAVEKKH 231 (285)
T ss_dssp HHHHHHHHTSCCCT-TCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTT-CCSSCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCC-CccCCCCCCHHHHHHHccccchHHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCC
Confidence 555555554 4433 4455555555555555555 55555555555 5555555555666666655553
No 35
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=2.2e-35 Score=213.92 Aligned_cols=190 Identities=17% Similarity=0.165 Sum_probs=154.9
Q ss_pred cHHHHHHHHcCChHHHHHHHh----cccCcccccC----CCCchHHHHHH---HcCCcchHHHHHHhcc----------c
Q 037245 22 DHELLNVLRRGDEHQIRPIAG----RMQNIFSTMS----PRGNTVLHMAI---RFRNHKVIPEILRQQD----------S 80 (215)
Q Consensus 22 ~~~l~~a~~~~~~~~~~~ll~----~~~~~~~~~~----~~g~t~L~~A~---~~~~~~~~~~ll~~~~----------~ 80 (215)
.++||.|++.|+.+.++.|++ .+.++ +..+ ..|.||||+|+ ..|+.+++++|++... .
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~-~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 84 (260)
T 3jxi_A 6 RPILFDIVSRGSPDGLEGLLSFLLTHKKRL-TDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINS 84 (260)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHHTCCT-TSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCc-chhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcc
Confidence 457999999999996555555 88887 5444 77999999999 6799999999996432 2
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCC--ccccccccCCCCCcHHHHHHhcCCHHHHHHHHH---
Q 037245 81 LLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESE--PESLLRITDDEGNTPLHNAVRNKHENVVRMLVK--- 155 (215)
Q Consensus 81 ~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~--- 155 (215)
....++..|.||||+|+..|+.+++++|+++|+++....... .....+..+..|.||||+|+..|+.+++++|++
T Consensus 85 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 164 (260)
T 3jxi_A 85 PFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGH 164 (260)
T ss_dssp CBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred cccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 234455689999999999999999999999998865321100 000011112679999999999999999999999
Q ss_pred cCCCCccccccCCCcHHHHHHHcCC---------HHHHHHHHHhCCCCc-------cccCccCccHHHHHHHhCC
Q 037245 156 KDRIPLGYINKAEQTPLAIAIDSSL---------TDIACFIIDQRPDSL-------DHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 156 ~~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~Ll~~g~~~~-------~~~~~~g~t~l~~A~~~~~ 214 (215)
.|+++ +.++..|+||||+|+..++ .+++++|+++| +++ +.++..|.||||+|+.+|+
T Consensus 165 ~ga~~-~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g-a~~~~~~~~~~~~d~~g~tpL~~A~~~g~ 237 (260)
T 3jxi_A 165 KQADL-RRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKC-AKLFPDTNLEALLNNDGLSPLMMAAKTGK 237 (260)
T ss_dssp CCCCT-TCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHH-HHHCTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred cCCCC-cccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhC-cccccccchhhcccCCCCCHHHHHHHcCC
Confidence 88887 7899999999999998887 79999999999 888 7899999999999999986
No 36
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.1e-34 Score=196.67 Aligned_cols=143 Identities=24% Similarity=0.355 Sum_probs=135.8
Q ss_pred hHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCc
Q 037245 57 TVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNT 136 (215)
Q Consensus 57 t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (215)
+.|+.||..|+.++|++|+ +.+++++.+|..|.||||+|+..++.+++++|+++|+++ +.++..|+|
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll-~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~------------~~~d~~g~T 72 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADV------------NAKDSDGRT 72 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT------------TCCCTTSCC
T ss_pred HHHHHHHHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch------------hhhccCCCC
Confidence 4799999999999999999 567889999999999999999999999999999999884 468899999
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHHHhCC
Q 037245 137 PLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 137 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
|||+|+..|+.+++++|+++|+++ +.++..|+||||+|+..|+.+++++|+++| ++++.+|..|.|||++|+.+|+
T Consensus 73 pLh~A~~~g~~~~v~~Ll~~gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~G~TpL~~A~~~g~ 148 (169)
T 4gpm_A 73 PLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLISKG-ADVNTSDSDGRTPLDLAREHGN 148 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHHCcCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHcCC
Confidence 999999999999999999999987 789999999999999999999999999999 9999999999999999999886
No 37
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=3.2e-35 Score=223.36 Aligned_cols=191 Identities=17% Similarity=0.174 Sum_probs=167.5
Q ss_pred CCCCcchhhccHHHHHHHHcCChHHHHHHH--------hcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhcccccc
Q 037245 12 TMDQELPATMDHELLNVLRRGDEHQIRPIA--------GRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLR 83 (215)
Q Consensus 12 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll--------~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~ 83 (215)
.++..+...+.+|||+|+..|+.+++++|+ +.|.++ +..|..|.||||+|+..|+.+++++|+ ..+++++
T Consensus 116 ~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~v-n~~d~~g~TpL~~A~~~g~~~iv~~Ll-~~ga~~~ 193 (373)
T 2fo1_E 116 SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADV-NAMDCDENTPLMLAVLARRRRLVAYLM-KAGADPT 193 (373)
T ss_dssp TTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCSC
T ss_pred cccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCC-cCCCCCCCCHHHHHHHcChHHHHHHHH-HCCCCCc
Confidence 444455445667799999999998888776 788998 899999999999999999999999999 5678889
Q ss_pred ccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcC---CHHHHHHHHHcCCCC
Q 037245 84 KHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNK---HENVVRMLVKKDRIP 160 (215)
Q Consensus 84 ~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~---~~~~~~~ll~~~~~~ 160 (215)
.++..|.||||+|+..|+.+++++|++++.. ...++..+..|.||||+|+..+ +.+++++|+++|+++
T Consensus 194 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~---------~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~ 264 (373)
T 2fo1_E 194 IYNKSERSALHQAAANRDFGMMVYMLNSTKL---------KGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKV 264 (373)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHH---------HHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCS
T ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHHhcCcc---------ccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCc
Confidence 9999999999999999999999999998721 0124468899999999999988 899999999999886
Q ss_pred ccc--------cccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHHHhCC
Q 037245 161 LGY--------INKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 161 ~~~--------~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
+. .+..|.||||+|+..|+.+++++|+++++++++.++..|.||||+|+.+|+
T Consensus 265 -~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~ 325 (373)
T 2fo1_E 265 -DYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGR 325 (373)
T ss_dssp -SCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTC
T ss_pred -ccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCC
Confidence 33 566899999999999999999999999779999999999999999999886
No 38
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.9e-34 Score=205.30 Aligned_cols=178 Identities=18% Similarity=0.171 Sum_probs=137.5
Q ss_pred cHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCC
Q 037245 22 DHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGD 101 (215)
Q Consensus 22 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 101 (215)
.++||.|+..|+.+++++|++++.++....+..|.||||+|+..++.+++++|+ +.+..++.++..|.||||.|+..|+
T Consensus 43 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~A~~~~~ 121 (240)
T 3eu9_A 43 VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLM-KYGADPSLIDGEGCSCIHLAAQFGH 121 (240)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHcCH
Confidence 345777777777777777777777663344455777777777777777777777 4455666667777777777777777
Q ss_pred HHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCC-HHHHHHHHHcCCCCcccccc-CCCcHHHHHHHcC
Q 037245 102 PAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKH-ENVVRMLVKKDRIPLGYINK-AEQTPLAIAIDSS 179 (215)
Q Consensus 102 ~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~-~~~~~~ll~~~~~~~~~~~~-~~~t~l~~a~~~~ 179 (215)
.+++++|+++|++ ++..+..|.||||.|+..+. .+++++|++.+++. +..+. .|.||||+|+..+
T Consensus 122 ~~~~~~Ll~~~~~------------~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~-~~~~~~~g~t~L~~A~~~~ 188 (240)
T 3eu9_A 122 TSIVAYLIAKGQD------------VDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSV-NLGDKYHKNTALHWAVLAG 188 (240)
T ss_dssp HHHHHHHHHTTCC------------TTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCT-TCCCTTTCCCHHHHHHHHT
T ss_pred HHHHHHHHhcCCC------------ccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCc-chhhccCCCcHHHHHHHcC
Confidence 7777777777655 33567788888888886555 78888888888876 45554 8899999999999
Q ss_pred CHHHHHHHHHhCCCCccccCccCccHHHHHHHhCC
Q 037245 180 LTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 180 ~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
+.+++++|+++| ++++.++..|.|||++|+.+|+
T Consensus 189 ~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~ 222 (240)
T 3eu9_A 189 NTTVISLLLEAG-ANVDAQNIKGESALDLAKQRKN 222 (240)
T ss_dssp CHHHHHHHHHHT-CCTTCBCTTSCBHHHHHHHTTC
T ss_pred CHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCc
Confidence 999999999999 9999999999999999999886
No 39
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=4.4e-35 Score=213.77 Aligned_cols=193 Identities=16% Similarity=0.148 Sum_probs=156.8
Q ss_pred hhccHHHHHHHHcCChHHHHHHHhc----ccCccc----ccCCCCchHHHHHHHc---CCcchHHHHHHhcccc------
Q 037245 19 ATMDHELLNVLRRGDEHQIRPIAGR----MQNIFS----TMSPRGNTVLHMAIRF---RNHKVIPEILRQQDSL------ 81 (215)
Q Consensus 19 ~~~~~~l~~a~~~~~~~~~~~ll~~----~~~~~~----~~~~~g~t~L~~A~~~---~~~~~~~~ll~~~~~~------ 81 (215)
..+.++||.|+..|+.++++.|++. +.++ + ..+..|.||||+|+.. |+.+++++|++.+...
T Consensus 11 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~ 89 (273)
T 2pnn_A 11 LYDRRSIFDAVAQSNCQELESLLPFLQRSKKRL-TDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQF 89 (273)
T ss_dssp CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCT-TSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHHHhhccccc-CCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHH
Confidence 3455789999999999999998874 4444 2 4578999999999986 9999999999653211
Q ss_pred cc----ccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCC--ccccccccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 037245 82 LR----KHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESE--PESLLRITDDEGNTPLHNAVRNKHENVVRMLVK 155 (215)
Q Consensus 82 ~~----~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~ 155 (215)
++ .++..|.||||+|+..|+.+++++|+++|+++....... .....+..+..|.||||+|+..++.+++++|++
T Consensus 90 i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 169 (273)
T 2pnn_A 90 VNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQ 169 (273)
T ss_dssp HTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHH
T ss_pred hhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 22 256789999999999999999999999998865321100 000011222379999999999999999999999
Q ss_pred ---cCCCCccccccCCCcHHHHHHHcCC---------HHHHHHHHHhCCCCcc-------ccCccCccHHHHHHHhCC
Q 037245 156 ---KDRIPLGYINKAEQTPLAIAIDSSL---------TDIACFIIDQRPDSLD-------HRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 156 ---~~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~Ll~~g~~~~~-------~~~~~g~t~l~~A~~~~~ 214 (215)
+|+++ +.++..|+||||+|+..++ .+++++|+++| ++++ .++..|.||||+|+.+|+
T Consensus 170 ~~~~gad~-~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g-a~~n~~~~~~~~~d~~g~TpL~~A~~~g~ 245 (273)
T 2pnn_A 170 NSWQPADI-SARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILG-AKLHPTLKLEEITNRKGLTPLALAASSGK 245 (273)
T ss_dssp CSSCCCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-HHHCTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred cccCCCCc-eeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhh-hhcccccccccccCCCCCCHHHHHHHhCh
Confidence 88887 7899999999999999988 79999999999 8886 589999999999999986
No 40
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=8e-35 Score=196.55 Aligned_cols=156 Identities=25% Similarity=0.328 Sum_probs=146.6
Q ss_pred ccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhC
Q 037245 21 MDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVG 100 (215)
Q Consensus 21 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 100 (215)
..++|+.|+..|+.+++++|++++.++ +..+..|.||||+|+. ++.+++++|+ ..+.+++.++..|.||||+|+..|
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNV-NAQNGFGRTALQVMKL-GNPEIARRLL-LRGANPDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCT-TCCCTTSCCHHHHCCS-SCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCc-cccCccCccHHHHHHc-CcHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcC
Confidence 456899999999999999999999998 8999999999999999 9999999999 567888999999999999999999
Q ss_pred CHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCC
Q 037245 101 DPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSL 180 (215)
Q Consensus 101 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 180 (215)
+.+++++|+++|+++ +..+..|.||||+|+..++.+++++|+++|+...+..+..|.|||++|+..++
T Consensus 82 ~~~~v~~Ll~~g~~~------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 149 (162)
T 1ihb_A 82 FLDTLQTLLEFQADV------------NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGR 149 (162)
T ss_dssp CHHHHHHHHHTTCCT------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CHHHHHHHHHcCCCC------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCC
Confidence 999999999999774 46788999999999999999999999999998667899999999999999999
Q ss_pred HHHHHHHHHhC
Q 037245 181 TDIACFIIDQR 191 (215)
Q Consensus 181 ~~~~~~Ll~~g 191 (215)
.+++++|+++|
T Consensus 150 ~~~~~~Ll~~G 160 (162)
T 1ihb_A 150 NEVVSLMQANG 160 (162)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHhC
Confidence 99999999999
No 41
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=8.4e-34 Score=212.85 Aligned_cols=193 Identities=17% Similarity=0.204 Sum_probs=133.6
Q ss_pred hhccHHHHHHHHcCChHHHHHHHhcccCcccccCC-CCchHHHHHHHcCCcchHHHHHHhcc------------------
Q 037245 19 ATMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSP-RGNTVLHMAIRFRNHKVIPEILRQQD------------------ 79 (215)
Q Consensus 19 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~~~~ll~~~~------------------ 79 (215)
..++++|+.|++.|+.++|++|+++|+++ +.++. .|+||||+|+..|+.+++++|++.+.
T Consensus 23 ~~~~t~L~~Av~~g~~~~V~~LL~~Gadv-n~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~ 101 (337)
T 4g8k_A 23 VEDNHLLIKAVQNEDVDLVQQLLEGGANV-NFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAI 101 (337)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCCC-CccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHh
Confidence 34567899999999999999999999999 76654 58999999999999999999995421
Q ss_pred --------------ccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcC
Q 037245 80 --------------SLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNK 145 (215)
Q Consensus 80 --------------~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~ 145 (215)
.+++.++..|.||||+|+..|+.+++++|+++|+++..... ........+..|.||||+|+..|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~--~~~~~~~~~~~g~T~L~~A~~~g 179 (337)
T 4g8k_A 102 AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRK--TKEDQERLRKGGATALMDAAEKG 179 (337)
T ss_dssp HTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCC--CC-----CTTCSCCHHHHHHHHT
T ss_pred cccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhc--cccccccccCCCCcHHHHHHHCC
Confidence 23455667788888888888888888888888877543221 11122334455666666666666
Q ss_pred CHHHHHHHHHc-CCCC------------------------------------ccccccCCCcHHHHHHHcCCHHHHHHHH
Q 037245 146 HENVVRMLVKK-DRIP------------------------------------LGYINKAEQTPLAIAIDSSLTDIACFII 188 (215)
Q Consensus 146 ~~~~~~~ll~~-~~~~------------------------------------~~~~~~~~~t~l~~a~~~~~~~~~~~Ll 188 (215)
+.+++++|+++ |+++ .+.++..|+||||+|+..++.+++++|+
T Consensus 180 ~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll 259 (337)
T 4g8k_A 180 HVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLL 259 (337)
T ss_dssp CHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHH
Confidence 66666666542 3322 1334555667777777777777777776
Q ss_pred HhCCCCccccCccCccHHHHHHHhCC
Q 037245 189 DQRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 189 ~~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
+.+.++++.+|..|.||||+|+++|+
T Consensus 260 ~~~~~~vn~~d~~G~TpL~~A~~~g~ 285 (337)
T 4g8k_A 260 EQEHIEINDTDSDGKTALLLAVELKL 285 (337)
T ss_dssp TSTTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred HhcCCcccCcCCCCCCHHHHHHHcCC
Confidence 65336677777777777777776664
No 42
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=4.8e-34 Score=194.09 Aligned_cols=158 Identities=25% Similarity=0.361 Sum_probs=145.7
Q ss_pred hhccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHH
Q 037245 19 ATMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAAR 98 (215)
Q Consensus 19 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~ 98 (215)
....++|+.|+..|+.+++++|++++.++ +..+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+.
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~ 89 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMANGADV-NAEDASGWTPLHLAAFNGHLEIVEVLL-KNGADVNAVDHAGMTPLRLAAL 89 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHH
T ss_pred CcccchHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHH
Confidence 44456799999999999999999999998 889999999999999999999999999 5677888999999999999999
Q ss_pred hCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHc
Q 037245 99 VGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDS 178 (215)
Q Consensus 99 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~ 178 (215)
.|+.+++++|+++|+++ +..+..|.||||+|+..++.+++++|+++|+++ +.++..|.|||++|+..
T Consensus 90 ~~~~~~~~~Ll~~g~~~------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~ 156 (169)
T 2y1l_E 90 FGHLEIVEVLLKNGADV------------NANDMEGHTPLHLAAMFGHLEIVEVLLKNGADV-NAQDKFGKTAFDISIDN 156 (169)
T ss_dssp TTCHHHHHHHHHTTCCT------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCC------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHh
Confidence 99999999999999874 367889999999999999999999999999987 78899999999999999
Q ss_pred CCHHHHHHHHHhC
Q 037245 179 SLTDIACFIIDQR 191 (215)
Q Consensus 179 ~~~~~~~~Ll~~g 191 (215)
++.+++++|+++|
T Consensus 157 ~~~~~~~~L~~~G 169 (169)
T 2y1l_E 157 GNEDLAEILQKLN 169 (169)
T ss_dssp TCHHHHHHHHTC-
T ss_pred CCHHHHHHHHHcC
Confidence 9999999999876
No 43
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=9.6e-35 Score=217.04 Aligned_cols=184 Identities=14% Similarity=0.042 Sum_probs=148.3
Q ss_pred hhccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCC---cchHHHHHHhccccccccCCCCCCHHHH
Q 037245 19 ATMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRN---HKVIPEILRQQDSLLRKHNLKGETPLHI 95 (215)
Q Consensus 19 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~---~~~~~~ll~~~~~~~~~~~~~g~t~l~~ 95 (215)
..+.+|||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+ .++++.|++.....++.++..|.||||+
T Consensus 129 ~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~ 207 (327)
T 1sw6_A 129 EHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHH 207 (327)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHH
Confidence 34455699999999999999999999999 9999999999999999998 8899999977667899999999999999
Q ss_pred HHH----hCCHHHHHHHHhhcccccCC--------CCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccc
Q 037245 96 AAR----VGDPAIVSTILNYVPAITNG--------TESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGY 163 (215)
Q Consensus 96 a~~----~~~~~~~~~Ll~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~ 163 (215)
|+. .|+.+++++|++.++.+... .....+..++..+..|.||||.|+. +++|++++ .+.
T Consensus 208 A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~~---~n~ 278 (327)
T 1sw6_A 208 IIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIANM---LNA 278 (327)
T ss_dssp HHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHHT---TTC
T ss_pred HHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHhC---CCC
Confidence 999 89999999999885422110 0001134466789999999999985 89999884 367
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHHHhC
Q 037245 164 INKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQ 213 (215)
Q Consensus 164 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~ 213 (215)
++..|+||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+++|
T Consensus 279 ~d~~G~TpLh~A~~~g~~~~v~~Ll~~G-ad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 279 QDSNGDTCLNIAARLGNISIVDALLDYG-ADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp CCTTSCCHHHHHHHHCCHHHHHHHHHTT-CCTTCCCTTSCCGGGGTCC--
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHhcC
Confidence 8999999999999999999999999999 999999999999999998775
No 44
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.9e-34 Score=204.34 Aligned_cols=170 Identities=19% Similarity=0.221 Sum_probs=153.7
Q ss_pred cCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHh
Q 037245 31 RGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILN 110 (215)
Q Consensus 31 ~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 110 (215)
.|+.+++++|++++.++....+..|.||||+|+..|+.+++++|+ +.+.+++.++..|.||||+|+..|+.+++++|++
T Consensus 1 gg~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 79 (223)
T 2f8y_A 1 GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLL-EASADANIQDNMGRTPLHAAVSADAQGVFQILIR 79 (223)
T ss_dssp ----CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 367889999999999985556899999999999999999999999 5577888999999999999999999999999999
Q ss_pred hcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHh
Q 037245 111 YVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQ 190 (215)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 190 (215)
+++.. ++..+..|.||||+|+..++.+++++|+++|+++ +..+..|.||||+|+..++.+++++|+++
T Consensus 80 ~~~~~-----------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 147 (223)
T 2f8y_A 80 NRATD-----------LDARMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLKN 147 (223)
T ss_dssp BTTSC-----------TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCCC-----------cccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC-cCcCCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 88632 3467889999999999999999999999999987 78899999999999999999999999999
Q ss_pred CCCCccccCccCccHHHHHHHhCC
Q 037245 191 RPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 191 g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
| ++++.++..|.||||+|+.+|+
T Consensus 148 g-~~~~~~~~~g~t~L~~A~~~~~ 170 (223)
T 2f8y_A 148 G-ANKDMQNNREETPLFLAAREGS 170 (223)
T ss_dssp T-CCTTCCCTTCCCHHHHHHHHTC
T ss_pred C-CCCCCcCCCCcCHHHHHHHcCC
Confidence 9 9999999999999999999886
No 45
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.5e-33 Score=201.55 Aligned_cols=177 Identities=20% Similarity=0.237 Sum_probs=160.7
Q ss_pred HHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCH
Q 037245 23 HELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDP 102 (215)
Q Consensus 23 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~ 102 (215)
++|+.|+..|+.+++++|++++.++ +..+..|.||||+|+..|+.+++++|++.........+..|.||||+|+..|+.
T Consensus 11 ~~l~~A~~~g~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~ 89 (240)
T 3eu9_A 11 WDIVKATQYGIYERCRELVEAGYDV-RQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHL 89 (240)
T ss_dssp CCHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCH
T ss_pred hHHHHHHHcCChHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCH
Confidence 4599999999999999999999998 889999999999999999999999999665544445556699999999999999
Q ss_pred HHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCC-H
Q 037245 103 AIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSL-T 181 (215)
Q Consensus 103 ~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~-~ 181 (215)
+++++|+++|+++. ..+..|.||||.|+..++.+++++|+++|+++ +..+..|.||||+|+..+. .
T Consensus 90 ~~v~~Ll~~g~~~~------------~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~-~~~~~~g~t~l~~a~~~~~~~ 156 (240)
T 3eu9_A 90 SMVVQLMKYGADPS------------LIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDV-DMMDQNGMTPLMWAAYRTHSV 156 (240)
T ss_dssp HHHHHHHHTTCCTT------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHCCSS
T ss_pred HHHHHHHHcCCCCc------------ccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCc-cccCCCCCcHHHHHHHhCChH
Confidence 99999999997743 57889999999999999999999999999987 7889999999999996665 8
Q ss_pred HHHHHHHHhCCCCccccCc-cCccHHHHHHHhCC
Q 037245 182 DIACFIIDQRPDSLDHRLP-EELTLLHSAVMRQN 214 (215)
Q Consensus 182 ~~~~~Ll~~g~~~~~~~~~-~g~t~l~~A~~~~~ 214 (215)
+++++|++.| .+++..+. .|.||||+|+.+|+
T Consensus 157 ~~~~~L~~~~-~~~~~~~~~~g~t~L~~A~~~~~ 189 (240)
T 3eu9_A 157 DPTRLLLTFN-VSVNLGDKYHKNTALHWAVLAGN 189 (240)
T ss_dssp TTHHHHHHTT-CCTTCCCTTTCCCHHHHHHHHTC
T ss_pred HHHHHHHhcC-CCcchhhccCCCcHHHHHHHcCC
Confidence 9999999999 99999987 99999999999886
No 46
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.7e-33 Score=211.94 Aligned_cols=175 Identities=17% Similarity=0.089 Sum_probs=157.8
Q ss_pred ccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccc----------------
Q 037245 21 MDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRK---------------- 84 (215)
Q Consensus 21 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~---------------- 84 (215)
+.+|||+|+..|+.+++++|++++.++ +..+..|.||||+|+..++.+++++|++ .+.+++.
T Consensus 91 g~t~L~~A~~~g~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~~~l~~a~~~~ 168 (351)
T 3utm_A 91 GLVPLHNACSYGHYEVTELLLKHGACV-NAMDLWQFTPLHEAASKNRVEVCSLLLS-HGADPTLVNCHGKSAVDMAPTPE 168 (351)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHCSSHH
T ss_pred CCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCccccCCCCcchHHHhhhh
Confidence 445699999999999999999999999 8899999999999999999999999995 4444433
Q ss_pred --------------------------------------cCCCCCCHHHHHHHh---CCHHHHHHHHhhcccccCCCCCCc
Q 037245 85 --------------------------------------HNLKGETPLHIAARV---GDPAIVSTILNYVPAITNGTESEP 123 (215)
Q Consensus 85 --------------------------------------~~~~g~t~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~ 123 (215)
.+..|.||||+|+.. +..+++++|+++|+++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~-------- 240 (351)
T 3utm_A 169 LRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANV-------- 240 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCT--------
T ss_pred hHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCc--------
Confidence 335678999999998 5589999999999874
Q ss_pred cccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCc
Q 037245 124 ESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEEL 203 (215)
Q Consensus 124 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~ 203 (215)
+..+..|.||||+|+..++.+++++|+++|+++ +.++..|+||||+|+..++.+++++|+++| ++++.++..|.
T Consensus 241 ----~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-ad~~~~~~~g~ 314 (351)
T 3utm_A 241 ----NEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKM-NALDSLGQTALHRAALAGHLQTCRLLLSYG-SDPSIISLQGF 314 (351)
T ss_dssp ----TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSC
T ss_pred ----CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCCcCCCCC
Confidence 467889999999999999999999999999987 789999999999999999999999999999 99999999999
Q ss_pred cHHHHHHH
Q 037245 204 TLLHSAVM 211 (215)
Q Consensus 204 t~l~~A~~ 211 (215)
||+++|..
T Consensus 315 tal~~a~~ 322 (351)
T 3utm_A 315 TAAQMGNE 322 (351)
T ss_dssp CHHHHSCH
T ss_pred ChhhhhhH
Confidence 99999843
No 47
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=3.6e-33 Score=209.45 Aligned_cols=196 Identities=18% Similarity=0.215 Sum_probs=159.9
Q ss_pred CCCCcchhhccHHHHHHHHcCChHHHHHHHhcccCc--------------------------------ccccCCCCchHH
Q 037245 12 TMDQELPATMDHELLNVLRRGDEHQIRPIAGRMQNI--------------------------------FSTMSPRGNTVL 59 (215)
Q Consensus 12 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~--------------------------------~~~~~~~g~t~L 59 (215)
+++..+...+.+|||+|+..|+.+++++|+++|+++ .+..+..|.|||
T Consensus 50 dvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l 129 (337)
T 4g8k_A 50 NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAF 129 (337)
T ss_dssp CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHH
T ss_pred CCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHH
Confidence 344444444566799999999999999999988754 145677899999
Q ss_pred HHHHHcCCcchHHHHHHhcccccc----------ccCCCCCCHHHHHHHhCCHHHHHHHHh-hcccccCCCCCC------
Q 037245 60 HMAIRFRNHKVIPEILRQQDSLLR----------KHNLKGETPLHIAARVGDPAIVSTILN-YVPAITNGTESE------ 122 (215)
Q Consensus 60 ~~A~~~~~~~~~~~ll~~~~~~~~----------~~~~~g~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~------ 122 (215)
|+|+..++.+++++|++ .++.++ ..+..|.||||+|+..|+.+++++|++ .|+++.......
T Consensus 130 ~~A~~~~~~~~~~~ll~-~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~ 208 (337)
T 4g8k_A 130 MEAAVYGKVKALKFLYK-RGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIH 208 (337)
T ss_dssp HHHHHTTCHHHHHHHHH-TTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHH
T ss_pred HHHHHcCcHHHHHHHHH-cCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHH
Confidence 99999999999999995 444443 344568999999999999999999996 477765443332
Q ss_pred -------------------ccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHH
Q 037245 123 -------------------PESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDI 183 (215)
Q Consensus 123 -------------------~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 183 (215)
.+..++.++..|+||||+|+..++.+++++|+..+...++.+|..|+||||+|++.|+.++
T Consensus 209 ~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~i 288 (337)
T 4g8k_A 209 ALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKI 288 (337)
T ss_dssp HHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred HHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHH
Confidence 3445678889999999999999999999999987444448899999999999999999999
Q ss_pred HHHHHHhCCCCccccCccCccHHHHHHHhCC
Q 037245 184 ACFIIDQRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 184 ~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
|++|+++| ++++.+ +|||+|+.+|+
T Consensus 289 v~~Ll~~G-Ad~n~~-----~~L~~A~~~~~ 313 (337)
T 4g8k_A 289 AELLCKRG-ASTDCG-----DLVMTARRNYD 313 (337)
T ss_dssp HHHHHTTS-CSSTTC-----CHHHHHHHTTC
T ss_pred HHHHHHCC-CCCCCC-----CHHHHHHHcCC
Confidence 99999999 887754 69999999886
No 48
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=211.80 Aligned_cols=176 Identities=20% Similarity=0.238 Sum_probs=160.4
Q ss_pred HHHHHHHcCChHHHHHHHhcccC--cccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHH----
Q 037245 24 ELLNVLRRGDEHQIRPIAGRMQN--IFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAA---- 97 (215)
Q Consensus 24 ~l~~a~~~~~~~~~~~ll~~~~~--~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~---- 97 (215)
++|.|+..|+.+.++.++..+.+ + +..|..|.||||+|+..|+.+++++|++.+..+++..+..|.||||+|+
T Consensus 79 ~l~~a~~~~~~~~~~~l~~~~~~~~~-n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~ 157 (276)
T 4hbd_A 79 DAHPELVRRHLVTFRAMSARLLDYVV-NIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATL 157 (276)
T ss_dssp TCCHHHHHHHHHHHHHHCHHHHHHHH-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhcC-cCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHh
Confidence 46778888899999999888766 5 7889999999999999999999999996655589999999999999999
Q ss_pred -HhCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHH
Q 037245 98 -RVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAI 176 (215)
Q Consensus 98 -~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~ 176 (215)
..++.+++++|++.|... +..+..|+||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+
T Consensus 158 ~~~~~~~~v~~Ll~~g~~~------------~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~-n~~d~~G~TpLh~A~ 224 (276)
T 4hbd_A 158 KTQDDIETVLQLFRLGNIN------------AKASQAGQTALMLAVSHGRVDVVKALLACEADV-NVQDDDGSTALMCAC 224 (276)
T ss_dssp CSHHHHHHHHHHHHHSCTT------------CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred hhhhhHHHHHHHHHcCCCc------------cccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHH
Confidence 678899999999999663 356788999999999999999999999999997 789999999999999
Q ss_pred HcCCHHHHHHHHH-hCCCCccccCccCccHHHHHHHhCC
Q 037245 177 DSSLTDIACFIID-QRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 177 ~~~~~~~~~~Ll~-~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
..|+.+++++|++ .| ++++.+|..|.||||+|+.+|+
T Consensus 225 ~~g~~~iv~~Ll~~~g-ad~~~~d~~g~TpL~~A~~~g~ 262 (276)
T 4hbd_A 225 EHGHKEIAGLLLAVPS-CDISLTDRDGSTALMVALDAGQ 262 (276)
T ss_dssp HHTCHHHHHHHHTSTT-CCTTCCCTTSCCHHHHHHHHTC
T ss_pred HCCCHHHHHHHHhcCC-CCCcCcCCCCCCHHHHHHHcCC
Confidence 9999999999999 78 9999999999999999999986
No 49
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.5e-34 Score=206.72 Aligned_cols=183 Identities=18% Similarity=0.154 Sum_probs=159.9
Q ss_pred CCCcchhhccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhcc-----ccccccCC
Q 037245 13 MDQELPATMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQD-----SLLRKHNL 87 (215)
Q Consensus 13 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~-----~~~~~~~~ 87 (215)
++..+.. +.+|||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..++.+++++|++... ..++..+.
T Consensus 38 ~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 115 (236)
T 1ikn_D 38 LNFQNNL-QQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNY 115 (236)
T ss_dssp CCCCCTT-CCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCT
T ss_pred hhccCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCC
Confidence 4444443 445699999999999999999999999 8899999999999999999999999996542 23677888
Q ss_pred CCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCC-CCCcHHHHHHhcCCHHHHHHHHHcCCCCcccccc
Q 037245 88 KGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDD-EGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINK 166 (215)
Q Consensus 88 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~ 166 (215)
.|.||||+|+..|+.+++++|+++|+++. ..+. .|.||||+|+..++.+++++|+++|+++ +.++.
T Consensus 116 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------------~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~ 182 (236)
T 1ikn_D 116 NGHTCLHLASIHGYLGIVELLVSLGADVN------------AQEPCNGRTALHLAVDLQNPDLVSLLLKCGADV-NRVTY 182 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHHTCCTT------------CCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCS-CCCCT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcccC
Confidence 99999999999999999999999998854 5665 8999999999999999999999999997 78999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCcc--ccCccCccHHHHHHH
Q 037245 167 AEQTPLAIAIDSSLTDIACFIIDQRPDSLD--HRLPEELTLLHSAVM 211 (215)
Q Consensus 167 ~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~--~~~~~g~t~l~~A~~ 211 (215)
.|.|||++|+..++.+++++|+++| ++.. .++..|.||.+.+..
T Consensus 183 ~g~tpl~~A~~~~~~~~~~~Ll~~g-a~~~~~~~~~~~~~~~~~~~~ 228 (236)
T 1ikn_D 183 QGYSPYQLTWGRPSTRIQQQLGQLT-LENLQMLPESEDEESYDTESE 228 (236)
T ss_dssp TCCCGGGGCTTSSCHHHHHHHHTTS-CGGGSSCCCCCTTTCCCCC--
T ss_pred CCCCHHHHHHccCchHHHHHHHHcc-hhhhhcCCccchHHHHhhhcc
Confidence 9999999999999999999999999 6555 778888888765543
No 50
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=1e-33 Score=192.08 Aligned_cols=156 Identities=19% Similarity=0.197 Sum_probs=145.8
Q ss_pred ccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhC
Q 037245 21 MDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVG 100 (215)
Q Consensus 21 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 100 (215)
+.+|||.|+..|+.+++++|++.+.++ +..+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..+
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENVI-NHTDEEGFTPLMWAAAHGQIAVVEFLL-QNGADPQLLGKGRESALSLACSKG 80 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHHcC
Confidence 345799999999999999999999988 899999999999999999999999999 457788889999999999999999
Q ss_pred CHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCC
Q 037245 101 DPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSL 180 (215)
Q Consensus 101 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 180 (215)
+.+++++|+++|+++ +..+..|.||||+|+..++.+++++|+++|+++ +..+..|.||+++|+..|+
T Consensus 81 ~~~~v~~Ll~~g~~~------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~ 147 (167)
T 3v31_A 81 YTDIVKMLLDCGVDV------------NEYDWNGGTPLLYAVHGNHVKCVKMLLESGADP-TIETDSGYNSMDLAVALGY 147 (167)
T ss_dssp CHHHHHHHHHHTCCT------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTC
T ss_pred CHHHHHHHHHCCCCC------------CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCc
Confidence 999999999999774 467889999999999999999999999999987 7889999999999999999
Q ss_pred HHHHHHHHHhC
Q 037245 181 TDIACFIIDQR 191 (215)
Q Consensus 181 ~~~~~~Ll~~g 191 (215)
.+++++|++++
T Consensus 148 ~~~~~~L~~~~ 158 (167)
T 3v31_A 148 RSVQQVIESHL 158 (167)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999988
No 51
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=2.4e-33 Score=194.43 Aligned_cols=151 Identities=19% Similarity=0.172 Sum_probs=91.2
Q ss_pred cccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCcccccc
Q 037245 49 STMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLR 128 (215)
Q Consensus 49 ~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 128 (215)
+.+|..|.||||+|+..|+.+++++|++ .+.+++.++..|.||||+|+..++.+++++|+++|+++ +
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------------~ 95 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVE-NFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV------------N 95 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHH-HHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT------------T
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHH-hccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCC------------C
Confidence 3455566666666666666666666663 34455555566666666666666666666666665542 2
Q ss_pred ccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHH
Q 037245 129 ITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHS 208 (215)
Q Consensus 129 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~ 208 (215)
..+..|.||||+|+..++.+++++|+++|+++ +..+..|.||||+|+..++.+++++|+++| ++++.++..|.||+++
T Consensus 96 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~ 173 (192)
T 2rfm_A 96 TKDFSGKTPLMWSIIFGYSEMSYFLLEHGANV-NDRNLEGETPLIVASKYGRSEIVKKLLELG-ADISARDLTGLTAEAS 173 (192)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCBCTTSCBHHHH
T ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHH
Confidence 44555666666666666666666666666554 455566666666666666666666666666 6666666666666666
Q ss_pred HHHhCC
Q 037245 209 AVMRQN 214 (215)
Q Consensus 209 A~~~~~ 214 (215)
|+.+|+
T Consensus 174 A~~~~~ 179 (192)
T 2rfm_A 174 ARIFGR 179 (192)
T ss_dssp HHHTTC
T ss_pred HHHhCc
Confidence 665554
No 52
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=2.2e-33 Score=194.65 Aligned_cols=156 Identities=18% Similarity=0.191 Sum_probs=146.1
Q ss_pred ccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhC
Q 037245 21 MDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVG 100 (215)
Q Consensus 21 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 100 (215)
+.+|||.|+..|+.+++++|++++.++ +..+..|.||||+|+..++.+++++|+ ..+.+++.++..|.||||+|+..+
T Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~ 112 (192)
T 2rfm_A 35 NRTPLMVACMLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNRLGIAEKLL-SKGSNVNTKDFSGKTPLMWSIIFG 112 (192)
T ss_dssp CCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHHcC
Confidence 445699999999999999999999998 889999999999999999999999999 556788899999999999999999
Q ss_pred CHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCC
Q 037245 101 DPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSL 180 (215)
Q Consensus 101 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 180 (215)
+.+++++|+++|+++ +..+..|.||||+|+..++.+++++|+++|+++ +.++..|.||+++|+..++
T Consensus 113 ~~~~v~~Ll~~g~~~------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~ 179 (192)
T 2rfm_A 113 YSEMSYFLLEHGANV------------NDRNLEGETPLIVASKYGRSEIVKKLLELGADI-SARDLTGLTAEASARIFGR 179 (192)
T ss_dssp CHHHHHHHHHTTCCS------------SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTC
T ss_pred CHHHHHHHHHCCCCC------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhCc
Confidence 999999999999874 467889999999999999999999999999987 7899999999999999999
Q ss_pred HHHHHHHHHhC
Q 037245 181 TDIACFIIDQR 191 (215)
Q Consensus 181 ~~~~~~Ll~~g 191 (215)
.+++++|++++
T Consensus 180 ~~~v~~Ll~~~ 190 (192)
T 2rfm_A 180 QEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhcc
Confidence 99999999886
No 53
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=5.8e-33 Score=193.72 Aligned_cols=165 Identities=18% Similarity=0.208 Sum_probs=150.7
Q ss_pred CCCCcchhhccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCC
Q 037245 12 TMDQELPATMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGET 91 (215)
Q Consensus 12 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t 91 (215)
.++..+.. +.+|||.|+..|+.+++++|+++|+++ +..+..|.||||+|+..++.+++++|++..+.+++.++..|.|
T Consensus 31 ~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 108 (201)
T 3hra_A 31 QVDEVDTE-GNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGN 108 (201)
T ss_dssp CTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCC
T ss_pred CCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCc
Confidence 34444444 345699999999999999999999999 8999999999999999999999999998888889999999999
Q ss_pred HHHHHHHhCCHHHHHHHHhhc-ccccCCCCCCccccccccCCCCCcHHHHHHhcCC-----HHHHHHHHHcCCCCccccc
Q 037245 92 PLHIAARVGDPAIVSTILNYV-PAITNGTESEPESLLRITDDEGNTPLHNAVRNKH-----ENVVRMLVKKDRIPLGYIN 165 (215)
Q Consensus 92 ~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~-----~~~~~~ll~~~~~~~~~~~ 165 (215)
|||+|+..|+.+++++|+++| ++ ++..+..|+||||+|+..++ .+++++|+++|+++ +.++
T Consensus 109 ~L~~A~~~~~~~~v~~Ll~~g~~~------------~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~-~~~~ 175 (201)
T 3hra_A 109 ALIPAAEKGHIDNVKLLLEDGRED------------IDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQ-SIKD 175 (201)
T ss_dssp SHHHHHHTTCHHHHHHHHHHCCCC------------TTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCT-TCCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCC------------cCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCC-CccC
Confidence 999999999999999999998 55 44688899999999999988 99999999999997 7899
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHHhC
Q 037245 166 KAEQTPLAIAIDSSLTDIACFIIDQR 191 (215)
Q Consensus 166 ~~~~t~l~~a~~~~~~~~~~~Ll~~g 191 (215)
..|.|||++|+..++.+++++|+++|
T Consensus 176 ~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 176 NSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 99999999999999999999999886
No 54
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=100.00 E-value=1.4e-32 Score=183.89 Aligned_cols=150 Identities=25% Similarity=0.328 Sum_probs=133.0
Q ss_pred cHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCC
Q 037245 22 DHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGD 101 (215)
Q Consensus 22 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 101 (215)
.++|+.|+..|+.+++++|++++.++ + .+..|.||||+|+..|+.+++++|+ +.+.+++.++..|.||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPF-T-TDWLGTSPLHLAAQYGHFSTTEVLL-RAGVSRDARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCC-C-CCTTCCCHHHHHHHHTCHHHHHHHH-TTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCC-C-cCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCh
Confidence 46799999999999999999998876 4 5788999999999999999999999 5677788888999999999999999
Q ss_pred HHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCH
Q 037245 102 PAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLT 181 (215)
Q Consensus 102 ~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~ 181 (215)
.+++++|+++|+++ +..+..|.||||+|+..++.+++++|+++|+++ +.++..|.|||++|+..|+.
T Consensus 80 ~~~v~~Ll~~g~~~------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~ 146 (153)
T 1awc_B 80 ANIVEVLLKHGADV------------NAKDMLKMTALHWATEHNHQEVVELLIKYGADV-HTQSKFCKTAFDISIDNGNE 146 (153)
T ss_dssp HHHHHHHHTTTCCT------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHHcCCCC------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCH
Confidence 99999999998774 367888999999999999999999999998887 77888999999999999999
Q ss_pred HHHHHH
Q 037245 182 DIACFI 187 (215)
Q Consensus 182 ~~~~~L 187 (215)
+++++|
T Consensus 147 ~i~~~L 152 (153)
T 1awc_B 147 DLAEIL 152 (153)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999886
No 55
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=3.5e-33 Score=191.53 Aligned_cols=165 Identities=22% Similarity=0.287 Sum_probs=151.4
Q ss_pred HHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCH
Q 037245 23 HELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDP 102 (215)
Q Consensus 23 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~ 102 (215)
++|+.|+..|+.+++++|++++...++..+..|.||||+|+..++.+++++|+ ..+.+++.++..|.||||+|+..|+.
T Consensus 7 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~ 85 (179)
T 3f6q_A 7 DDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLI-MRGARINVMNRGDDTPLHLAASHGHR 85 (179)
T ss_dssp CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCH
Confidence 45999999999999999999965544889999999999999999999999999 56788899999999999999999999
Q ss_pred HHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHH
Q 037245 103 AIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTD 182 (215)
Q Consensus 103 ~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~ 182 (215)
+++++|+++|+++ +..+..|.||||+|+..++.+++++|+++|+++ +..+..|.||+++|+..++.+
T Consensus 86 ~~v~~Ll~~g~~~------------~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~~~~~ 152 (179)
T 3f6q_A 86 DIVQKLLQYKADI------------NAVNEHGNVPLHYACFWGQDQVAEDLVANGALV-SICNKYGEMPVDKAKAPLREL 152 (179)
T ss_dssp HHHHHHHHTTCCT------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-SBCCTTSCCGGGGSCHHHHHH
T ss_pred HHHHHHHHcCCCC------------CccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-chhccCCCCcHHHHHHHHHHH
Confidence 9999999999874 467899999999999999999999999999997 789999999999999999999
Q ss_pred HHHHHHHhCCCCccccCccC
Q 037245 183 IACFIIDQRPDSLDHRLPEE 202 (215)
Q Consensus 183 ~~~~Ll~~g~~~~~~~~~~g 202 (215)
++++|+++| ++++..+..+
T Consensus 153 ~~~~L~~~g-~~~~~~~~~~ 171 (179)
T 3f6q_A 153 LRERAEKMG-QNLNRIPYKD 171 (179)
T ss_dssp HHHHHHHTT-CCCSCBCCCC
T ss_pred HHHHHHHhh-cCcccCCccc
Confidence 999999999 8888766544
No 56
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=1.4e-32 Score=186.47 Aligned_cols=146 Identities=16% Similarity=0.153 Sum_probs=137.0
Q ss_pred CCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCC
Q 037245 54 RGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDE 133 (215)
Q Consensus 54 ~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~ 133 (215)
.|.||||.|+..|+.+++++|++. +..++.++..|.||||+|+..|+.+++++|+++|+++ +..+..
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------------~~~~~~ 68 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQ-ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP------------QLLGKG 68 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT------------TCCCTT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHc-CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC------------CCcCCC
Confidence 578999999999999999999954 6778899999999999999999999999999999774 367889
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHHHhC
Q 037245 134 GNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQ 213 (215)
Q Consensus 134 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~ 213 (215)
|.||||+|+..++.+++++|+++|+++ +..+..|.||||+|+..++.+++++|+++| ++++.++..|.||+++|+..|
T Consensus 69 g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~ 146 (167)
T 3v31_A 69 RESALSLACSKGYTDIVKMLLDCGVDV-NEYDWNGGTPLLYAVHGNHVKCVKMLLESG-ADPTIETDSGYNSMDLAVALG 146 (167)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcC
Confidence 999999999999999999999999987 788999999999999999999999999999 999999999999999999988
Q ss_pred C
Q 037245 214 N 214 (215)
Q Consensus 214 ~ 214 (215)
+
T Consensus 147 ~ 147 (167)
T 3v31_A 147 Y 147 (167)
T ss_dssp C
T ss_pred c
Confidence 6
No 57
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=3e-32 Score=185.68 Aligned_cols=146 Identities=21% Similarity=0.221 Sum_probs=136.1
Q ss_pred CchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCCC
Q 037245 55 GNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEG 134 (215)
Q Consensus 55 g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (215)
+.+|||.|+..|+.+++++|++.....++.++..|.||||+|+..|+.+++++|+++|+++ +..+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------------~~~~~~g 69 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP------------HILAKER 69 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT------------TCCCTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc------------hhhcccC
Confidence 4689999999999999999997777768899999999999999999999999999999874 3678899
Q ss_pred CcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHHHhCC
Q 037245 135 NTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 135 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
.||||+|+..++.+++++|+++|+++ +..+..|.||||+|+..++.+++++|+++| ++++.++..|.||||+|+..|+
T Consensus 70 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~ 147 (172)
T 3v30_A 70 ESALSLASTGGYTDIVGLLLERDVDI-NIYDWNGGTPLLYAVRGNHVKCVEALLARG-ADLTTEADSGYTPMDLAVALGY 147 (172)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHhCc
Confidence 99999999999999999999999987 788999999999999999999999999999 9999999999999999999886
No 58
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=5.2e-32 Score=192.98 Aligned_cols=171 Identities=20% Similarity=0.217 Sum_probs=145.7
Q ss_pred CCCCcchhhccHHHHHHHHcCChHHHHHHHhcccCcc----cccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCC
Q 037245 12 TMDQELPATMDHELLNVLRRGDEHQIRPIAGRMQNIF----STMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNL 87 (215)
Q Consensus 12 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~----~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~ 87 (215)
.++..+.. +.+|||+|+..|+.+++++|+++++++. +..+..|.||||+|+..|+.+++++|++ .+.+++.++.
T Consensus 29 ~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~ 106 (232)
T 2rfa_A 29 EVHQRGAM-GETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLA-RGASVSARAT 106 (232)
T ss_dssp CTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCC
T ss_pred CcccCCCC-CCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHh-CCCCCCcccC
Confidence 34444444 4456999999999999999999998753 3456789999999999999999999994 5666766654
Q ss_pred -------------CCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHH----
Q 037245 88 -------------KGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVV---- 150 (215)
Q Consensus 88 -------------~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~---- 150 (215)
.|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..++.+++
T Consensus 107 ~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~------------~~~d~~g~t~L~~A~~~~~~~~~~~i~ 174 (232)
T 2rfa_A 107 GSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI------------RAQDSLGNTVLHILILQPNKTFACQMY 174 (232)
T ss_dssp SGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT------------TCCCTTSCCHHHHHHTCSCHHHHHHHH
T ss_pred CcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC------------CCCCCCCCCHHHHHHHcCChHHHHHHH
Confidence 7999999999999999999999999874 46899999999999999999988
Q ss_pred HHHHHcCCCCc-----cccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccc
Q 037245 151 RMLVKKDRIPL-----GYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDH 197 (215)
Q Consensus 151 ~~ll~~~~~~~-----~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~ 197 (215)
++|+++|++.. +.++..|.||||+|++.|+.+++++|+++| .....
T Consensus 175 ~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g-~~~~~ 225 (232)
T 2rfa_A 175 NLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKR-KHIAA 225 (232)
T ss_dssp HHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHH-HHC--
T ss_pred HHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcC-ccchh
Confidence 99999998763 478899999999999999999999999999 54443
No 59
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=100.00 E-value=1.3e-32 Score=186.22 Aligned_cols=157 Identities=22% Similarity=0.328 Sum_probs=141.3
Q ss_pred hccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHh
Q 037245 20 TMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARV 99 (215)
Q Consensus 20 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~ 99 (215)
.+.++|+.|+..|+.++++.|++.+....+..+..|.||||+|+..++.+++++|+ ..+.+++.++..|.||||+|+..
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~ 85 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLL-QHGADVHAKDKGGLVPLHNACSY 85 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHT
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHH-hcCCCCCccCCCCCCHHHHHHHc
Confidence 34567999999999999999999665444778889999999999999999999999 56778889999999999999999
Q ss_pred CCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcC
Q 037245 100 GDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSS 179 (215)
Q Consensus 100 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~ 179 (215)
++.+++++|+++|+++ +..+..|+||||+|+..++.+++++|+++|+++ +.++..|.||+++|+. +
T Consensus 86 ~~~~~v~~Ll~~g~~~------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~a~~-~ 151 (165)
T 3twr_A 86 GHYEVAELLVKHGAVV------------NVADLWKFTPLHEAAAKGKYEICKLLLQHGADP-TKKNRDGNTPLDLVKD-G 151 (165)
T ss_dssp TCHHHHHHHHHTTCCT------------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCTGGGSCT-T
T ss_pred CcHHHHHHHHhCCCCC------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCChhHhHhc-C
Confidence 9999999999999874 367889999999999999999999999999987 7899999999999877 8
Q ss_pred CHHHHHHHHHhC
Q 037245 180 LTDIACFIIDQR 191 (215)
Q Consensus 180 ~~~~~~~Ll~~g 191 (215)
+.+++++|+++|
T Consensus 152 ~~~i~~~L~~~g 163 (165)
T 3twr_A 152 DTDIQDLLRGDA 163 (165)
T ss_dssp CHHHHHHHHTC-
T ss_pred ChHHHHHHhhcc
Confidence 899999999988
No 60
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=5.3e-32 Score=183.97 Aligned_cols=149 Identities=21% Similarity=0.210 Sum_probs=137.2
Q ss_pred cCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCcccccccc
Q 037245 51 MSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRIT 130 (215)
Q Consensus 51 ~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~ 130 (215)
....+.++|+.|+..|+.+++++|+ ..+.+++.++..|.||||+|+..|+.+++++|+++|+++ +..
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------------~~~ 76 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILM-ANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV------------NAV 76 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT------------TCC
T ss_pred CCCcccchHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC------------Ccc
Confidence 3456789999999999999999999 557788899999999999999999999999999999774 367
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHH
Q 037245 131 DDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAV 210 (215)
Q Consensus 131 ~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~ 210 (215)
+..|.||||+|+..++.+++++|+++|++. +..+..|.||||+|+..++.+++++|+++| ++++.++..|.|||++|+
T Consensus 77 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~ 154 (169)
T 2y1l_E 77 DHAGMTPLRLAALFGHLEIVEVLLKNGADV-NANDMEGHTPLHLAAMFGHLEIVEVLLKNG-ADVNAQDKFGKTAFDISI 154 (169)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHH
Confidence 889999999999999999999999999987 788999999999999999999999999999 999999999999999999
Q ss_pred HhCC
Q 037245 211 MRQN 214 (215)
Q Consensus 211 ~~~~ 214 (215)
.+|+
T Consensus 155 ~~~~ 158 (169)
T 2y1l_E 155 DNGN 158 (169)
T ss_dssp HTTC
T ss_pred HhCC
Confidence 9886
No 61
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=210.33 Aligned_cols=177 Identities=20% Similarity=0.160 Sum_probs=156.9
Q ss_pred hhccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHH
Q 037245 19 ATMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAAR 98 (215)
Q Consensus 19 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~ 98 (215)
....++||.|+..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|+ +.+++++.+|..|.||||+|+.
T Consensus 19 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~tpLh~A~~~g~~~~v~~Ll-~~ga~~n~~d~~g~tpLh~A~~ 96 (229)
T 2vge_A 19 LNPLVLLLDAALTGELEVVQQAVKEMNDP-SQPNEEGITALHNAICGANYSIVDFLI-TAGANVNSPDSHGWTPLHCAAS 96 (229)
T ss_dssp SCHHHHHHHHHHHTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHH
T ss_pred cchhHHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHH
Confidence 34456799999999999999999999998 899999999999999999999999999 5678899999999999999999
Q ss_pred hCCHHHHHHHHhhcccccCCCCCCcccccccc-CCCCCcHHHHH--HhcCCHHHHHHHHHcCCCCccccccCCCcHHHHH
Q 037245 99 VGDPAIVSTILNYVPAITNGTESEPESLLRIT-DDEGNTPLHNA--VRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIA 175 (215)
Q Consensus 99 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~a--~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a 175 (215)
.|+.+++++|+++|+++. .. +..|+||||+| +..++.+++++|++.|+++ +..+..+.||++.+
T Consensus 97 ~g~~~~v~~Ll~~ga~~~------------~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~-~~~~~~~~~~l~~~ 163 (229)
T 2vge_A 97 CNDTVICMALVQHGAAIF------------ATTLSDGATAFEKCDPYREGYADCATYLADVEQSM-GLMNSGAVYALWDY 163 (229)
T ss_dssp TTCHHHHHHHHTTTCCTT------------CCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHT-TTSGGGEEEESSCB
T ss_pred cCCHHHHHHHHHcCCCcc------------cccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCc-ccccCCchHHHHHH
Confidence 999999999999998854 34 46899999999 9999999999999999987 77888899998865
Q ss_pred HHcCCHHHHHHHHHhCCCC--ccccCccCccHHHHHHHhCC
Q 037245 176 IDSSLTDIACFIIDQRPDS--LDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 176 ~~~~~~~~~~~Ll~~g~~~--~~~~~~~g~t~l~~A~~~~~ 214 (215)
+... ..++|++.| ++ ++.+|..|.||||+|+.+|+
T Consensus 164 ~~~~---~~~~ll~~g-a~~~~~~~d~~G~TpL~~A~~~g~ 200 (229)
T 2vge_A 164 SAEF---GDELSFREG-ESVTVLRRDGPEETDWWWAALHGQ 200 (229)
T ss_dssp CCSS---TTBCCBCTT-CEEEEEESSCTTCSSEEEEEETTE
T ss_pred hhcc---ccccCcccc-ccccccccCCCcccHHHHHHHcCC
Confidence 5443 336788888 77 67789999999999998875
No 62
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=100.00 E-value=6.8e-32 Score=181.06 Aligned_cols=152 Identities=23% Similarity=0.361 Sum_probs=138.5
Q ss_pred cHHHHHHHHcCChHHHHHHHhcc-cCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhC
Q 037245 22 DHELLNVLRRGDEHQIRPIAGRM-QNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVG 100 (215)
Q Consensus 22 ~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 100 (215)
.++|+.|+..|+.+++++|+++. .++ +..+..|.||||+ +..|+.+++++|+ ..+.+++.++..|.||||+|+..|
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~-~~~~~~g~t~L~~-~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHP-DALNRFGKTALQV-MMFGSTAIALELL-KQGASPNVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCT-TCCCTTSCCHHHH-SCTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCc-cccCCCCCcHHHH-HHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHcC
Confidence 46799999999999999999992 266 8889999999999 9999999999999 567788999999999999999999
Q ss_pred CHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCC
Q 037245 101 DPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSL 180 (215)
Q Consensus 101 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 180 (215)
+.+++++|+++|+++ +..+..|+||||+|+..++.+++++|++. +++ +..+..|.|||++|+..++
T Consensus 80 ~~~~v~~Ll~~g~~~------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~-~~~~~~g~t~l~~A~~~~~ 145 (156)
T 1bd8_A 80 FLDTLKVLVEHGADV------------NVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDL-HRRDARGLTPLELALQRGA 145 (156)
T ss_dssp CHHHHHHHHHTTCCS------------CCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCT-TCCCTTSCCHHHHHHHSCC
T ss_pred cHHHHHHHHHcCCCC------------CCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCC-CCcCCCCCCHHHHHHHcCc
Confidence 999999999999774 36788999999999999999999999998 665 7889999999999999999
Q ss_pred HHHHHHHHHh
Q 037245 181 TDIACFIIDQ 190 (215)
Q Consensus 181 ~~~~~~Ll~~ 190 (215)
.+++++|+++
T Consensus 146 ~~~v~~Ll~~ 155 (156)
T 1bd8_A 146 QDLVDILQGH 155 (156)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhh
Confidence 9999999875
No 63
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=100.00 E-value=7.9e-32 Score=180.22 Aligned_cols=144 Identities=19% Similarity=0.207 Sum_probs=132.7
Q ss_pred CchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCCC
Q 037245 55 GNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEG 134 (215)
Q Consensus 55 g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (215)
..++|+.|+..|+.+++++|++. +.+++ .+..|.||||+|+..|+.+++++|+++|+++ +..+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~-g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------------~~~~~~g 67 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMAN-GAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR------------DARTKVD 67 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHH-TCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT------------TCCCTTC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHc-CCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC------------CCCCCCC
Confidence 36899999999999999999965 44444 6888999999999999999999999998774 3678899
Q ss_pred CcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHHHhCC
Q 037245 135 NTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 135 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
+||||+|+..++.+++++|+++|+++ +..+..|.||||+|+..++.+++++|+++| ++++.++..|.|||++|+.+|+
T Consensus 68 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~ 145 (153)
T 1awc_B 68 RTPLHMAASEGHANIVEVLLKHGADV-NAKDMLKMTALHWATEHNHQEVVELLIKYG-ADVHTQSKFCKTAFDISIDNGN 145 (153)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHcChHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHcCC
Confidence 99999999999999999999999987 788999999999999999999999999999 9999999999999999999986
No 64
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=1.4e-32 Score=200.51 Aligned_cols=176 Identities=23% Similarity=0.276 Sum_probs=141.7
Q ss_pred hhccHHHHHHHHc---CChHHHHHHHhcccCc------cc----ccCCCCchHHHHHHHcCCcchHHHHHHhcccccccc
Q 037245 19 ATMDHELLNVLRR---GDEHQIRPIAGRMQNI------FS----TMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKH 85 (215)
Q Consensus 19 ~~~~~~l~~a~~~---~~~~~~~~ll~~~~~~------~~----~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~ 85 (215)
..+.+|||+|+.. |+.+++++|++++++. .+ ..+..|.||||+|+..|+.+++++|+ ..+++++.+
T Consensus 52 ~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll-~~ga~~~~~ 130 (273)
T 2pnn_A 52 ETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLV-ENGADVQAA 130 (273)
T ss_dssp TTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHH-HTTCCTTCC
T ss_pred cCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHH-HCCCCcCcc
Confidence 3455679999987 9999999999998652 02 25678999999999999999999999 457788888
Q ss_pred CC--------------CCCCHHHHHHHhCCHHHHHHHHh---hcccccCCCCCCccccccccCCCCCcHHHHHHhcCC--
Q 037245 86 NL--------------KGETPLHIAARVGDPAIVSTILN---YVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKH-- 146 (215)
Q Consensus 86 ~~--------------~g~t~l~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~-- 146 (215)
+. .|.||||+|+..|+.+++++|++ +|++ ++..|..|+||||+|+..++
T Consensus 131 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad------------~~~~d~~g~tpLh~A~~~~~~~ 198 (273)
T 2pnn_A 131 ANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD------------ISARDSVGNTVLHALVEVADNT 198 (273)
T ss_dssp BCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC------------TTCCCTTSCCHHHHHHHHCCSC
T ss_pred ccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC------------ceeeCCCCCcHHHHHHHccCcc
Confidence 76 79999999999999999999999 8877 44688999999999999888
Q ss_pred -------HHHHHHHHHcCCCCc------cccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHH
Q 037245 147 -------ENVVRMLVKKDRIPL------GYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLH 207 (215)
Q Consensus 147 -------~~~~~~ll~~~~~~~------~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~ 207 (215)
.+++++|+++|+++. +..+..|.||||+|+..|+.+++++|+++|+.++..+...+.+|.+
T Consensus 199 ~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 199 VDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC--------------
T ss_pred hhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhccC
Confidence 899999999988763 2488999999999999999999999999995588888877777654
No 65
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=4.4e-33 Score=211.01 Aligned_cols=153 Identities=17% Similarity=0.197 Sum_probs=133.6
Q ss_pred cCCCCchHHHHHHHcC--CcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCcccccc
Q 037245 51 MSPRGNTVLHMAIRFR--NHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLR 128 (215)
Q Consensus 51 ~~~~g~t~L~~A~~~~--~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 128 (215)
.+..|.||||+|+..| +.+++++|+ ..+++++.++..|.||||+|+..|+.+++++|+++|++.. ...++
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll-~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-------~~~~~ 205 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILV-QLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKS-------SLRLD 205 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHH-HHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSS-------SCCTT
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccc-------ccccc
Confidence 6778999999999999 999999999 4578899999999999999999999999999999997721 12245
Q ss_pred ccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccc-----------
Q 037245 129 ITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDH----------- 197 (215)
Q Consensus 129 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~----------- 197 (215)
..+..|+||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|+++| ++++.
T Consensus 206 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~~~~~~ 283 (364)
T 3ljn_A 206 YANKQGNSHLHWAILINWEDVAMRFVEMGIDV-NMEDNEHTVPLYLSVRAAMVLLTKELLQKT-DVFLIQACPYHNGTTV 283 (364)
T ss_dssp CCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTCCHHHHHHHHHHS-CHHHHHTCTTBSSSSB
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHhChHHHHHHHHHcC-CchhhhcCcccCcccc
Confidence 78899999999999999999999999999997 789999999999999999999999999998 55433
Q ss_pred -cCccCccHHHHHHHhC
Q 037245 198 -RLPEELTLLHSAVMRQ 213 (215)
Q Consensus 198 -~~~~g~t~l~~A~~~~ 213 (215)
.+..+++|+++|+..|
T Consensus 284 ~~~~~~~~~l~~aa~~~ 300 (364)
T 3ljn_A 284 LPDRVVWLDFVPAAADP 300 (364)
T ss_dssp CGGGCCCCTTSCSSCCH
T ss_pred cccccccccchhhhhcc
Confidence 4556778877665543
No 66
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.1e-32 Score=202.24 Aligned_cols=162 Identities=18% Similarity=0.152 Sum_probs=150.1
Q ss_pred ccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCC-CCHHHHHHHh
Q 037245 21 MDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKG-ETPLHIAARV 99 (215)
Q Consensus 21 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g-~t~l~~a~~~ 99 (215)
+.+|||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++ .+++++.++..| .||||+|+..
T Consensus 62 g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~~t~L~~A~~~ 139 (285)
T 3kea_A 62 NEFPLHQAATLEDTKIVKILLFSGLDD-SQFDDKGNTALYYAVDSGNMQTVKLFVK-KNWRLMFYGKTGWKTSFYHAVML 139 (285)
T ss_dssp TCCHHHHHTTSSSCHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-HCGGGGGCSSSGGGSHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHh-cCCCCCccCCCCCCCHHHHHHHc
Confidence 456799999999999999999999999 8899999999999999999999999994 578889999999 8999999999
Q ss_pred CCHHHHHHHHhhcccccCCCCCCccccccccCC-CCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcH-HHHHHH
Q 037245 100 GDPAIVSTILNYVPAITNGTESEPESLLRITDD-EGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTP-LAIAID 177 (215)
Q Consensus 100 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~-l~~a~~ 177 (215)
|+.+++++|+++|++. .+. .|.||||+|+..|+.+++++|+++|+++ +..+..|.|| ||+|+.
T Consensus 140 ~~~~~v~~Ll~~g~~~--------------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~-n~~~~~g~t~~L~~A~~ 204 (285)
T 3kea_A 140 NDVSIVSYFLSEIPST--------------FDLAILLSCIHITIKNGHVDMMILLLDYMTST-NTNNSLLFIPDIKLAID 204 (285)
T ss_dssp TCHHHHHHHHTTSCTT--------------CCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHT-CTTCCCBCCTTHHHHHH
T ss_pred CCHHHHHHHHhCCCcc--------------ccccCCccHHHHHHHcChHHHHHHHHHcCCCC-CcccCCCCChHHHHHHH
Confidence 9999999999999763 222 7899999999999999999999999987 7899999998 999999
Q ss_pred cCCHHHHHHHHHhCCCCccccCc
Q 037245 178 SSLTDIACFIIDQRPDSLDHRLP 200 (215)
Q Consensus 178 ~~~~~~~~~Ll~~g~~~~~~~~~ 200 (215)
.++.+++++|+++| ++++.++.
T Consensus 205 ~~~~~~v~~Ll~~g-ad~~~~~~ 226 (285)
T 3kea_A 205 NKDIEMLQALFKYD-INIYSANL 226 (285)
T ss_dssp HTCHHHHHHHTTSC-BCSTTTTG
T ss_pred cCCHHHHHHHHHcC-CCCCCCCh
Confidence 99999999999999 99998875
No 67
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.98 E-value=2.6e-33 Score=200.63 Aligned_cols=177 Identities=16% Similarity=0.115 Sum_probs=128.1
Q ss_pred hccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHh
Q 037245 20 TMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARV 99 (215)
Q Consensus 20 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~ 99 (215)
.+.+|||.|++.|+.+.++.|+++|.++ +. +..|.||||.|+..|+.+++++|+ ..+.+++.++..|.||||+|+..
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~-~~-~~~~~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRV-KF-NPLPLALLLDSSLEGEFDLVQRII-YEVDDPSLPNDEGITALHNAVCA 80 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHT-STTSSCCCCCTTSCCHHHHHHHH
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCc-cc-CchhhHHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHc
Confidence 3567799999999999999999999998 54 477899999999999999999999 56668999999999999999999
Q ss_pred CCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCC-cHHHHH--H
Q 037245 100 GDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQ-TPLAIA--I 176 (215)
Q Consensus 100 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~-t~l~~a--~ 176 (215)
|+.+++++|+++|+++ +..|..|+||||+|+..++.+++++|+++|+++ +..+..|. ||||+| +
T Consensus 81 g~~~~v~~Ll~~ga~~------------~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~~~t~l~~a~~~ 147 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVNV------------NAADSDGWTPLHCAASCNNVQVCKFLVESGAAV-FAMTYSDMQTAADKCEEM 147 (239)
T ss_dssp TCHHHHHHHHHHTCCT------------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHCCSS
T ss_pred CCHHHHHHHHHcCCCC------------CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ceecCCCCcchHHHHHHh
Confidence 9999999999999874 468889999999999999999999999999998 67777666 999999 7
Q ss_pred HcCCHHHHHHHHHhCCCCcccc---------CccCccHHHHHHHhC
Q 037245 177 DSSLTDIACFIIDQRPDSLDHR---------LPEELTLLHSAVMRQ 213 (215)
Q Consensus 177 ~~~~~~~~~~Ll~~g~~~~~~~---------~~~g~t~l~~A~~~~ 213 (215)
..|+.+++++|+++| ++++.. +..+.++.+++...|
T Consensus 148 ~~g~~~~~~~Ll~~~-a~~~~~~~~~~~al~d~~~~~~~eLa~~~G 192 (239)
T 1ycs_B 148 EEGYTQCSQFLYGVQ-EKMGIMNKGVIYALWDYEPQNDDELPMKEG 192 (239)
T ss_dssp STTCCCHHHHHHHHH-HHTTTTGGGEEEESSCBCCSSTTBCCBCSS
T ss_pred hhccHHHHHHHHHhh-hcccccccceEEEEeccCCCCCCcccccCC
Confidence 889999999999999 777765 555677777666555
No 68
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.98 E-value=1.2e-31 Score=180.95 Aligned_cols=146 Identities=18% Similarity=0.212 Sum_probs=134.6
Q ss_pred CCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCC
Q 037245 54 RGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDE 133 (215)
Q Consensus 54 ~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~ 133 (215)
...||||.|+..|+.+++++|+ +.+..++.++..|.||||+|+. |+.+++++|+++|+++ +..+..
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll-~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~------------~~~~~~ 69 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLL-QNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANP------------DLKDRT 69 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHT-TSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT------------TCCCTT
T ss_pred hHhhHHHHHHHcCCHHHHHHHH-hCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCC------------CCCCCC
Confidence 4579999999999999999999 5677888999999999999999 9999999999999774 367889
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHHHhC
Q 037245 134 GNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQ 213 (215)
Q Consensus 134 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~ 213 (215)
|.||||+|+..++.+++++|+++|+++ +.++..|.||||+|+..++.+++++|+++|+..++.++..|.||||+|+.+|
T Consensus 70 g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~ 148 (162)
T 1ihb_A 70 GFAVIHDAARAGFLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYG 148 (162)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcC
Confidence 999999999999999999999999887 7889999999999999999999999999994447999999999999999988
Q ss_pred C
Q 037245 214 N 214 (215)
Q Consensus 214 ~ 214 (215)
+
T Consensus 149 ~ 149 (162)
T 1ihb_A 149 R 149 (162)
T ss_dssp C
T ss_pred C
Confidence 6
No 69
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.98 E-value=5.9e-32 Score=185.41 Aligned_cols=147 Identities=20% Similarity=0.187 Sum_probs=135.3
Q ss_pred CCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCC
Q 037245 53 PRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDD 132 (215)
Q Consensus 53 ~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 132 (215)
..+.++|+.|+..|+.+++++|++..+.+++.++..|.||||+|+..|+.+++++|+++|+++ +..+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------------~~~~~ 70 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI------------NVMNR 70 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT------------TCCCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC------------CCcCC
Confidence 457899999999999999999998778889999999999999999999999999999999774 46788
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHHHh
Q 037245 133 EGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMR 212 (215)
Q Consensus 133 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~ 212 (215)
.|.||||+|+..++.+++++|+++|+++ +..+..|.||||+|+..++.+++++|+++| ++++.++..|.|||++|+..
T Consensus 71 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~ 148 (179)
T 3f6q_A 71 GDDTPLHLAASHGHRDIVQKLLQYKADI-NAVNEHGNVPLHYACFWGQDQVAEDLVANG-ALVSICNKYGEMPVDKAKAP 148 (179)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCSSBCCTTSCCGGGGSCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCcchhccCCCCcHHHHHHH
Confidence 9999999999999999999999999987 789999999999999999999999999999 99999999999999999776
Q ss_pred C
Q 037245 213 Q 213 (215)
Q Consensus 213 ~ 213 (215)
+
T Consensus 149 ~ 149 (179)
T 3f6q_A 149 L 149 (179)
T ss_dssp H
T ss_pred H
Confidence 5
No 70
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.98 E-value=5e-32 Score=183.37 Aligned_cols=147 Identities=21% Similarity=0.225 Sum_probs=135.8
Q ss_pred cCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCcccccccc
Q 037245 51 MSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRIT 130 (215)
Q Consensus 51 ~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~ 130 (215)
.+..|.|+||.|+..|+.+++++|++..+..+...+..|.||||+|+..|+.+++++|+++|+++ +..
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------------~~~ 71 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV------------HAK 71 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT------------TCC
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC------------Ccc
Confidence 35678899999999999999999997777777888889999999999999999999999999774 467
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHH
Q 037245 131 DDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAV 210 (215)
Q Consensus 131 ~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~ 210 (215)
+..|+||||+|+..++.+++++|+++|+++ +..+..|.||||+|+..++.+++++|+++| ++++.++..|.||+++|+
T Consensus 72 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~a~ 149 (165)
T 3twr_A 72 DKGGLVPLHNACSYGHYEVAELLVKHGAVV-NVADLWKFTPLHEAAAKGKYEICKLLLQHG-ADPTKKNRDGNTPLDLVK 149 (165)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCTGGGSC
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCChhHhHh
Confidence 889999999999999999999999999987 789999999999999999999999999999 999999999999999986
Q ss_pred H
Q 037245 211 M 211 (215)
Q Consensus 211 ~ 211 (215)
.
T Consensus 150 ~ 150 (165)
T 3twr_A 150 D 150 (165)
T ss_dssp T
T ss_pred c
Confidence 5
No 71
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=1.5e-31 Score=193.33 Aligned_cols=159 Identities=23% Similarity=0.270 Sum_probs=141.6
Q ss_pred hhccHHHHHHHHc---CChHHHHHHHhcccCcccc-----------cCCCCchHHHHHHHcCCcchHHHHHHhccccccc
Q 037245 19 ATMDHELLNVLRR---GDEHQIRPIAGRMQNIFST-----------MSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRK 84 (215)
Q Consensus 19 ~~~~~~l~~a~~~---~~~~~~~~ll~~~~~~~~~-----------~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~ 84 (215)
..+.+|||+|+.. |+.+++++|+++++++ +. .+..|.||||+|+..|+.+++++|+ +.+++++.
T Consensus 41 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~-~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~ 118 (256)
T 2etb_A 41 STGKTCLMKAVLNLQDGVNACIMPLLQIDKDS-GNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLV-ENGADVHL 118 (256)
T ss_dssp TTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHT-TCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHH-HTTCCTTC
T ss_pred CCCCCHHHHHHHccccchHHHHHHHHhcCCcc-cchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHH-HcCCCCCc
Confidence 3445569999999 9999999999998876 32 3477999999999999999999999 55778888
Q ss_pred cCCC-------------CCCHHHHHHHhCCHHHHHHHHh---hcccccCCCCCCccccccccCCCCCcHHHHHHh--cCC
Q 037245 85 HNLK-------------GETPLHIAARVGDPAIVSTILN---YVPAITNGTESEPESLLRITDDEGNTPLHNAVR--NKH 146 (215)
Q Consensus 85 ~~~~-------------g~t~l~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~--~~~ 146 (215)
++.. |.||||+|+..|+.+++++|++ +|++ ++..|..|+||||+|+. .++
T Consensus 119 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~------------~n~~d~~g~TpLh~A~~~~~~~ 186 (256)
T 2etb_A 119 RACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS------------LEATDSLGNTVLHALVMIADNS 186 (256)
T ss_dssp CCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC------------TTCCCTTSCCHHHHHHHHCCSC
T ss_pred ccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC------------cCccCCCCCCHHHHHHHcccCC
Confidence 8876 9999999999999999999999 8877 44689999999999998 788
Q ss_pred HH-------HHHHHHHcCCCCc------cccccCCCcHHHHHHHcCCHHHHHHHHHhC
Q 037245 147 EN-------VVRMLVKKDRIPL------GYINKAEQTPLAIAIDSSLTDIACFIIDQR 191 (215)
Q Consensus 147 ~~-------~~~~ll~~~~~~~------~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g 191 (215)
.+ ++++|+++|+++. +.++..|.||||+|+..|+.+++++|+++|
T Consensus 187 ~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 244 (256)
T 2etb_A 187 PENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQRE 244 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCC
Confidence 88 9999999988762 578999999999999999999999999998
No 72
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=3.1e-31 Score=177.82 Aligned_cols=144 Identities=21% Similarity=0.288 Sum_probs=134.0
Q ss_pred CchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCCC
Q 037245 55 GNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEG 134 (215)
Q Consensus 55 g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (215)
+.|+||.|+..|+.+++++|++..+.+++..+..|.||||+ +..|+.+++++|+++|+++ +..+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~------------~~~~~~g 68 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP------------NVQDTSG 68 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT------------TCCCTTS
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC------------CCcCCCC
Confidence 56899999999999999999977555788899999999999 9999999999999999874 3678899
Q ss_pred CcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHHHhCC
Q 037245 135 NTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 135 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|+++ ++++.++..|.||||+|+.+|+
T Consensus 69 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~g~t~l~~A~~~~~ 145 (156)
T 1bd8_A 69 TSPVHDAARTGFLDTLKVLVEHGADV-NVPDGTGALPIHLAVQEGHTAVVSFLAAE--SDLHRRDARGLTPLELALQRGA 145 (156)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHTT--SCTTCCCTTSCCHHHHHHHSCC
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHhChHHHHHHHHhc--cCCCCcCCCCCCHHHHHHHcCc
Confidence 99999999999999999999999887 78899999999999999999999999988 8899999999999999999886
No 73
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=2.4e-31 Score=194.22 Aligned_cols=156 Identities=15% Similarity=0.276 Sum_probs=143.3
Q ss_pred ccHHHHHHHHcCChHHHHHHHhccc-CcccccCCCCchHHHHHH-----HcCCcchHHHHHHhccccccccCCCCCCHHH
Q 037245 21 MDHELLNVLRRGDEHQIRPIAGRMQ-NIFSTMSPRGNTVLHMAI-----RFRNHKVIPEILRQQDSLLRKHNLKGETPLH 94 (215)
Q Consensus 21 ~~~~l~~a~~~~~~~~~~~ll~~~~-~~~~~~~~~g~t~L~~A~-----~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~ 94 (215)
+.+|||+|+..|+.+++++|++.|+ ++ +..+..|.||||+|+ ..++.+++++|+ ..+...+..+..|.||||
T Consensus 111 g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~-~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll-~~g~~~~~~~~~g~tpLh 188 (276)
T 4hbd_A 111 GNTALHYSVSHANFPVVQQLLDSGVCKV-DKQNRAGYSPIMLTALATLKTQDDIETVLQLF-RLGNINAKASQAGQTALM 188 (276)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTSCCCT-TCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHH-HHSCTTCCCTTTCCCHHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHCCCCcC-CCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHH-HcCCCccccCCCCCCHHH
Confidence 4456999999999999999999998 66 899999999999999 668889999999 455777788889999999
Q ss_pred HHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHH-cCCCCccccccCCCcHHH
Q 037245 95 IAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVK-KDRIPLGYINKAEQTPLA 173 (215)
Q Consensus 95 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~~t~l~ 173 (215)
+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|++ .|+++ +.++..|.|||+
T Consensus 189 ~A~~~g~~~~v~~Ll~~gad~------------n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~-~~~d~~g~TpL~ 255 (276)
T 4hbd_A 189 LAVSHGRVDVVKALLACEADV------------NVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDI-SLTDRDGSTALM 255 (276)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT------------TCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCT-TCCCTTSCCHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCC------------CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCC-cCcCCCCCCHHH
Confidence 999999999999999999884 4688999999999999999999999999 78876 789999999999
Q ss_pred HHHHcCCHHHHHHHHHhC
Q 037245 174 IAIDSSLTDIACFIIDQR 191 (215)
Q Consensus 174 ~a~~~~~~~~~~~Ll~~g 191 (215)
+|+..|+.+++++|+++.
T Consensus 256 ~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 256 VALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHTCHHHHHHHHHHC
T ss_pred HHHHcCCHHHHHHHHhcc
Confidence 999999999999999987
No 74
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=3.4e-31 Score=191.88 Aligned_cols=160 Identities=26% Similarity=0.329 Sum_probs=140.2
Q ss_pred hhccHHHHHHH---HcCChHHHHHHHhcccCc----------ccccCCCCchHHHHHHHcCCcchHHHHHHhcccccccc
Q 037245 19 ATMDHELLNVL---RRGDEHQIRPIAGRMQNI----------FSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKH 85 (215)
Q Consensus 19 ~~~~~~l~~a~---~~~~~~~~~~ll~~~~~~----------~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~ 85 (215)
..+.+|||+|+ ..|+.+++++|++.+.+. ....+..|.||||+|+..|+.+++++|+ ..+++++.+
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~ 122 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLV-EKGADVHAQ 122 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHH-HTTCCTTCC
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHH-hCCCCcCcc
Confidence 33556799999 779999999999988542 1344558999999999999999999999 567788888
Q ss_pred C--------------CCCCCHHHHHHHhCCHHHHHHHHh---hcccccCCCCCCccccccccCCCCCcHHHHHHhcCC--
Q 037245 86 N--------------LKGETPLHIAARVGDPAIVSTILN---YVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKH-- 146 (215)
Q Consensus 86 ~--------------~~g~t~l~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~-- 146 (215)
+ ..|.||||+|+..|+.+++++|++ +|++ ++..|..|+||||+|+..++
T Consensus 123 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~------------~~~~d~~g~TpLh~A~~~~~~~ 190 (260)
T 3jxi_A 123 ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD------------LRRQDSRGNTVLHALVAIADNT 190 (260)
T ss_dssp CEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC------------TTCCCTTSCCHHHHHHHHCCSS
T ss_pred ccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC------------CcccCCCCCcHHHHHHHhccCc
Confidence 7 689999999999999999999999 7777 44689999999999998877
Q ss_pred -------HHHHHHHHHcCCCCc------cccccCCCcHHHHHHHcCCHHHHHHHHHhC
Q 037245 147 -------ENVVRMLVKKDRIPL------GYINKAEQTPLAIAIDSSLTDIACFIIDQR 191 (215)
Q Consensus 147 -------~~~~~~ll~~~~~~~------~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g 191 (215)
.+++++|+++|+++. +..+..|.||||+|+..|+.+++++|+++|
T Consensus 191 ~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 248 (260)
T 3jxi_A 191 RENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRRE 248 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhC
Confidence 799999999988752 468899999999999999999999999999
No 75
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=9.5e-31 Score=193.10 Aligned_cols=173 Identities=20% Similarity=0.253 Sum_probs=148.8
Q ss_pred HHHHcCChHHHHHHHhcccCcc--------cccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHH
Q 037245 27 NVLRRGDEHQIRPIAGRMQNIF--------STMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAAR 98 (215)
Q Consensus 27 ~a~~~~~~~~~~~ll~~~~~~~--------~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~ 98 (215)
.++..+..+.++.++.....+. ...+..|.||||.|+..|+.+++++|+ ..+.+++..+..|.||||+|+.
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~ 82 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLL-ERGADINYANVDGLTALHQACI 82 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHH-HHCCCTTCBCTTCCBHHHHHHH
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHH
Confidence 4667777788888887665431 112345789999999999999999999 4567888999999999999999
Q ss_pred hCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccc-------------
Q 037245 99 VGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYIN------------- 165 (215)
Q Consensus 99 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~------------- 165 (215)
.|+.+++++|+++|+++ +..+..|+||||+|+..|+.+++++|+++|+++ +..+
T Consensus 83 ~g~~~~v~~Ll~~ga~~------------~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~ 149 (299)
T 1s70_B 83 DDNVDMVKFLVENGANI------------NQPDNEGWIPLHAAASCGYLDIAEYLISQGAHV-GAVNSEGDTPLDIAEEE 149 (299)
T ss_dssp TTCHHHHHHHHHTTCCT------------TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCSH
T ss_pred cCCHHHHHHHHHCCCCC------------CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHhc
Confidence 99999999999999874 367889999999999999999999999998775 3322
Q ss_pred -----------------------------------------------cCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccc
Q 037245 166 -----------------------------------------------KAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHR 198 (215)
Q Consensus 166 -----------------------------------------------~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~ 198 (215)
..|.||||+|+..|+.+++++|+++| ++++.+
T Consensus 150 ~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~d~~~~ 228 (299)
T 1s70_B 150 AMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR-YDVNIK 228 (299)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCC
T ss_pred chHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC-CCCCCc
Confidence 35789999999999999999999999 999999
Q ss_pred CccCccHHHHHHHhCC
Q 037245 199 LPEELTLLHSAVMRQN 214 (215)
Q Consensus 199 ~~~g~t~l~~A~~~~~ 214 (215)
|..|.||||+|+.+|+
T Consensus 229 d~~g~tpL~~A~~~~~ 244 (299)
T 1s70_B 229 DYDGWTPLHAAAHWGK 244 (299)
T ss_dssp CTTCCCHHHHHHHTTC
T ss_pred CCCCCcHHHHHHhcCC
Confidence 9999999999999886
No 76
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.97 E-value=1.6e-30 Score=174.34 Aligned_cols=146 Identities=13% Similarity=0.142 Sum_probs=111.6
Q ss_pred cccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCcccccc
Q 037245 49 STMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLR 128 (215)
Q Consensus 49 ~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 128 (215)
...+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+ .|+.+++++|+++|+++ +
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~------------~ 71 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALL-EAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP------------N 71 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHH-TTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC------------C
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC------------C
Confidence 345677899999999999999999999 557788888999999999985 89999999999998774 4
Q ss_pred ccCCCCCc-HHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHH
Q 037245 129 ITDDEGNT-PLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLH 207 (215)
Q Consensus 129 ~~~~~~~~-~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~ 207 (215)
..+..|+| |||+|+..++.+++++|+++|+++ +.++..|.||||+|+..++.+++++|+++| ++++.++..|.||.+
T Consensus 72 ~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 72 CADPATLTRPVHDAAREGFLDTLVVLHRAGARL-DVRDAWGRLPVDLAEELGHRDVARYLRAAA-GGTRGSNHARIDAAE 149 (156)
T ss_dssp CCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------------
T ss_pred CcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHhCHHHHHHHHHHcC-CCCCccCcCcCcccc
Confidence 67888998 999999999999999999999887 788899999999999999999999999999 999999999999887
Q ss_pred HHH
Q 037245 208 SAV 210 (215)
Q Consensus 208 ~A~ 210 (215)
-+.
T Consensus 150 ~~~ 152 (156)
T 1bi7_B 150 GPS 152 (156)
T ss_dssp ---
T ss_pred cCC
Confidence 553
No 77
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.97 E-value=5.9e-30 Score=167.78 Aligned_cols=131 Identities=15% Similarity=0.199 Sum_probs=118.6
Q ss_pred cCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCcc
Q 037245 45 QNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPE 124 (215)
Q Consensus 45 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 124 (215)
+++ +..+..|.||||+|+..|+.+++++|+ +.+.+++.++..|.||||+|+. ++.+++++|+++|+++.
T Consensus 3 ~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~-------- 71 (136)
T 1d9s_A 3 PGI-HMLGGSSDAGLATAAARGQVETVRQLL-EAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPN-------- 71 (136)
T ss_dssp CCC-SCCCCCCSCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSS--------
T ss_pred CCc-cCCCCCCccHHHHHHHcCCHHHHHHHH-HcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCC--------
Confidence 455 778899999999999999999999999 4577888899999999999999 99999999999997743
Q ss_pred ccccccCCC-CCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhC
Q 037245 125 SLLRITDDE-GNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQR 191 (215)
Q Consensus 125 ~~~~~~~~~-~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g 191 (215)
..+.. |+||||+|+..++.+++++|+++|+++ +.++..|.||||+|+..++.+++++|+++|
T Consensus 72 ----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 72 ----CADPATLTRPVHDAAREGFLDTLVVLHRAGARL-DVCDAWGRLPVDLAEEQGHRDIARYLHAAT 134 (136)
T ss_dssp ----CCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCC-CCCSSSSSCHHHHHHHHTCHHHHHHHHHHH
T ss_pred ----CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 67778 899999999999999999999999887 788999999999999999999999999998
No 78
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=5.1e-30 Score=191.52 Aligned_cols=167 Identities=17% Similarity=0.178 Sum_probs=137.7
Q ss_pred HHHHHHcCChHHHHHHHhcccCcccc-cCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCC--
Q 037245 25 LLNVLRRGDEHQIRPIAGRMQNIFST-MSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGD-- 101 (215)
Q Consensus 25 l~~a~~~~~~~~~~~ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~-- 101 (215)
+|.|+..+..++++.|++.+.++ +. .+..|.||||+|+..|+.+++++|+ +.+++++.++..|.||||+|+..|+
T Consensus 101 ~~~a~~~~~~~~~~~l~~~g~dv-n~~~d~~g~TpLh~Aa~~g~~~~v~~Ll-~~Gad~n~~d~~g~TpLh~A~~~g~~~ 178 (327)
T 1sw6_A 101 QHVSFDSLLQEVNDAFPNTQLNL-NIPVDEHGNTPLHWLTSIANLELVKHLV-KHGSNRLYGDNMGESCLVKAVKSVNNY 178 (327)
T ss_dssp ---CHHHHHHHHHHHCTTSCCCS-CSCCSTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTBCCTTCCCHHHHHHHSSHHH
T ss_pred hHHHHHhhHHHHHHHHHhcCCCc-ccccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHhcccc
Confidence 57778888889999999999999 87 8999999999999999999999999 5678899999999999999999998
Q ss_pred -HHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHh----cCCHHHHHHHHHc--------------------
Q 037245 102 -PAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVR----NKHENVVRMLVKK-------------------- 156 (215)
Q Consensus 102 -~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~----~~~~~~~~~ll~~-------------------- 156 (215)
.++++.|++++.. .++..+..|+||||+|+. .++.+++++|++.
T Consensus 179 ~~~~~~~ll~~~~~-----------~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~ 247 (327)
T 1sw6_A 179 DSGTFEALLDYLYP-----------CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEK 247 (327)
T ss_dssp HTTCHHHHHHHHGG-----------GGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----
T ss_pred cHHHHHHHHHhhhc-----------cccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcc
Confidence 7888888888722 245789999999999999 8999999999987
Q ss_pred CCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHHHhCC
Q 037245 157 DRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 157 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 214 (215)
|+++ +..+..|.||||.|+. +++|++++ ++.++..|.||||+|+.+|+
T Consensus 248 g~~~-~~~~~~g~t~L~~a~~------~~~Ll~~~---~n~~d~~G~TpLh~A~~~g~ 295 (327)
T 1sw6_A 248 ESKP-NDKNGERKDSILENLD------LKWIIANM---LNAQDSNGDTCLNIAARLGN 295 (327)
T ss_dssp -------------CHHHHHCS------HHHHHHHT---TTCCCTTSCCHHHHHHHHCC
T ss_pred cCCc-ccccccCCChhHHHHH------HHHHHHhC---CCCCCCCCCCHHHHHHHcCC
Confidence 5665 7788999999999986 89999884 88999999999999999986
No 79
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.96 E-value=4.6e-30 Score=176.59 Aligned_cols=159 Identities=10% Similarity=0.008 Sum_probs=137.8
Q ss_pred HHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCc----chHHHHHHhccccccccCCCCCCHHHHHHHh
Q 037245 24 ELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNH----KVIPEILRQQDSLLRKHNLKGETPLHIAARV 99 (215)
Q Consensus 24 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~----~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~ 99 (215)
+|+.|++.|+.+.++.++..+.+. ..+..|.||||+|+..++. +++++|+ ..+++++.++..|.||||+|+..
T Consensus 9 ~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll-~~Gadvn~~d~~g~TpLh~a~~~ 85 (186)
T 3t8k_A 9 TVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLI-NKGADIKSRTKEGTTLFFPLFQG 85 (186)
T ss_dssp SHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHH-HTTCCSSCCCTTCCCTHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHHc
Confidence 599999999999999999887543 2236799999999999875 5899999 67889999999999999999999
Q ss_pred CC------HHHHHHHHhhcccccCCCCCCccccccccCCCCC-cHHHHHHhcC-----CHHHHHHHHH-cCCCCcccccc
Q 037245 100 GD------PAIVSTILNYVPAITNGTESEPESLLRITDDEGN-TPLHNAVRNK-----HENVVRMLVK-KDRIPLGYINK 166 (215)
Q Consensus 100 ~~------~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~a~~~~-----~~~~~~~ll~-~~~~~~~~~~~ 166 (215)
++ .+++++|+++|+++ +.+|..|+ ||||+|+..+ ..+++++|++ +|+++ +.+|.
T Consensus 86 ~~~~~~~~~~iv~~Ll~~Gadi------------n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~-~~~d~ 152 (186)
T 3t8k_A 86 GGNDITGTTELCKIFLEKGADI------------TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQL-LIKDK 152 (186)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCS------------SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCT-TCCCT
T ss_pred CCcchhhHHHHHHHHHHCCCCC------------CccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCC-cccCC
Confidence 87 57899999999884 46889999 9999999844 3569999999 89987 89999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCccccC
Q 037245 167 AEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRL 199 (215)
Q Consensus 167 ~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~ 199 (215)
.|.||||+|++.++.+++++|.++. ...++++
T Consensus 153 ~G~TpL~~A~~~~~~~~v~~L~~~~-~~~~~~~ 184 (186)
T 3t8k_A 153 WGLTALEFVKRCQKPIALKMMEDYI-KKYNLKE 184 (186)
T ss_dssp TSCCHHHHHHTTTCHHHHHHHHHHH-HHHTCCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHHH-HHHhccc
Confidence 9999999999999999999999887 5555544
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=3.6e-29 Score=179.08 Aligned_cols=147 Identities=20% Similarity=0.180 Sum_probs=103.9
Q ss_pred CCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccC
Q 037245 52 SPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITD 131 (215)
Q Consensus 52 ~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~ 131 (215)
+..|.||||.|+..++.+.++.|+ ..+.+++.. ..|.||||.|+..|+.+++++|+++|+++ +..+
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll-~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~------------~~~d 67 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERI-AHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDP------------SLPN 67 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC------------CCCC
T ss_pred CccccccCchhhhhhhHHHHHHHh-ccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCC------------CCcC
Confidence 456899999999999999999999 566666643 67899999999999999999999999773 4678
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCc-cHHHHH-
Q 037245 132 DEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEEL-TLLHSA- 209 (215)
Q Consensus 132 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~-t~l~~A- 209 (215)
..|.||||+|+..|+.+++++|+++|+++ +.++..|+||||+|+..++.+++++|+++| ++++.++..|. ||+|+|
T Consensus 68 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~~~~t~l~~a~ 145 (239)
T 1ycs_B 68 DEGITALHNAVCAGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCNNVQVCKFLVESG-AAVFAMTYSDMQTAADKCE 145 (239)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCSSSCCCHHHHCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCcceecCCCCcchHHHHH
Confidence 99999999999999999999999999987 789999999999999999999999999999 99999998887 999999
Q ss_pred -HHhCC
Q 037245 210 -VMRQN 214 (215)
Q Consensus 210 -~~~~~ 214 (215)
+..|+
T Consensus 146 ~~~~g~ 151 (239)
T 1ycs_B 146 EMEEGY 151 (239)
T ss_dssp SSSTTC
T ss_pred Hhhhcc
Confidence 55554
No 81
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=2e-29 Score=179.09 Aligned_cols=158 Identities=17% Similarity=0.132 Sum_probs=133.3
Q ss_pred HHHHHhcccCcc--cccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhhccc
Q 037245 37 IRPIAGRMQNIF--STMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPA 114 (215)
Q Consensus 37 ~~~ll~~~~~~~--~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~ 114 (215)
++.|++++.++. +..+..+.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..|+.+++++|+++|++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAV-KEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHH-HHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHH-hcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 467788887761 234566788999999999999999999 45678899999999999999999999999999999987
Q ss_pred ccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccc-cCCCcHHHHH--HHcCCHHHHHHHHHhC
Q 037245 115 ITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYIN-KAEQTPLAIA--IDSSLTDIACFIIDQR 191 (215)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~~t~l~~a--~~~~~~~~~~~Ll~~g 191 (215)
+ +..|..|+||||+|+..|+.+++++|+++|+++ +..+ ..|.||||+| +..++.+++++|+++|
T Consensus 80 ~------------n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~g 146 (229)
T 2vge_A 80 V------------NSPDSHGWTPLHCAASCNDTVICMALVQHGAAI-FATTLSDGATAFEKCDPYREGYADCATYLADVE 146 (229)
T ss_dssp T------------TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHH
T ss_pred C------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ccccCCCCCCHHHHHHHHhcChHHHHHHHHHcC
Confidence 4 467889999999999999999999999999998 5554 6999999999 9999999999999999
Q ss_pred CCCccccCccCccHHHHH
Q 037245 192 PDSLDHRLPEELTLLHSA 209 (215)
Q Consensus 192 ~~~~~~~~~~g~t~l~~A 209 (215)
++++.++..|.||++.+
T Consensus 147 -a~~~~~~~~~~~~l~~~ 163 (229)
T 2vge_A 147 -QSMGLMNSGAVYALWDY 163 (229)
T ss_dssp -HHTTTSGGGEEEESSCB
T ss_pred -CCcccccCCchHHHHHH
Confidence 99999999999988744
No 82
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.96 E-value=1e-27 Score=154.82 Aligned_cols=124 Identities=30% Similarity=0.465 Sum_probs=106.8
Q ss_pred CCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCC
Q 037245 54 RGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDE 133 (215)
Q Consensus 54 ~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~ 133 (215)
+|.||||+|+..|+.+++++|++ .+..++.++..|.||||+|+..++.+++++|+++|+++ +..+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~------------~~~~~~ 67 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV------------NAKDKN 67 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHH-HTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT------------TCCCTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC------------cccCCC
Confidence 47889999999999999998884 56677778888999999999999999999999888763 357788
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhC
Q 037245 134 GNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQR 191 (215)
Q Consensus 134 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g 191 (215)
|.||||+|+..++.+++++|+++|+++ +.++..|.|||++|+..++.+++++|+++|
T Consensus 68 g~t~l~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 124 (126)
T 1n0r_A 68 GRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAG 124 (126)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred CCcHHHHHHHcChHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 899999999999999999999988886 678888999999999999999999999988
No 83
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.96 E-value=3.9e-28 Score=159.10 Aligned_cols=125 Identities=22% Similarity=0.234 Sum_probs=69.9
Q ss_pred CCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCC
Q 037245 53 PRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDD 132 (215)
Q Consensus 53 ~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 132 (215)
..+.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..++.+++++|+++|+++ +..+.
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------------~~~d~ 78 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILM-ANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV------------NAVDA 78 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT------------TCCCT
T ss_pred ccccHHHHHHHHhCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC------------CcCCC
Confidence 33455555555555555555555 334445555555555555555555555555555555442 23455
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhC
Q 037245 133 EGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQR 191 (215)
Q Consensus 133 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g 191 (215)
.|.||||+|+..++.+++++|+++|++. +..+..|.|||++|+..++.+++++|+++|
T Consensus 79 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 79 IGFTPLHLAAFIGHLEIAEVLLKHGADV-NAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC-cCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 5556666666655666666666555554 455555666666666666666666665543
No 84
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=7.6e-29 Score=166.20 Aligned_cols=141 Identities=18% Similarity=0.140 Sum_probs=114.7
Q ss_pred hhccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCC-HHHHHH
Q 037245 19 ATMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGET-PLHIAA 97 (215)
Q Consensus 19 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t-~l~~a~ 97 (215)
..+.++||.|+..|+.+++++|++++.++ +..+..|.||||+|+ .++.+++++|+ ..+.+++.++..|.| |||+|+
T Consensus 10 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~~~~v~~Ll-~~g~~~~~~d~~g~ttpL~~A~ 86 (156)
T 1bi7_B 10 EPSADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLL-LHGAEPNCADPATLTRPVHDAA 86 (156)
T ss_dssp CCSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHH-TTTCCCCCCCTTTCCCHHHHHH
T ss_pred ccchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCCHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHH
Confidence 33456799999999999999999999998 899999999999985 89999999999 567889999999999 999999
Q ss_pred HhCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHH
Q 037245 98 RVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIA 175 (215)
Q Consensus 98 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a 175 (215)
..|+.+++++|+++|+++ +..+..|+||||+|+..++.+++++|+++|+++ +..+..|.||.+.+
T Consensus 87 ~~~~~~~v~~Ll~~ga~~------------~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 87 REGFLDTLVVLHRAGARL------------DVRDAWGRLPVDLAEELGHRDVARYLRAAAGGT-RGSNHARIDAAEGP 151 (156)
T ss_dssp HHTCHHHHHHHHHHTCCS------------SCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------------------
T ss_pred HCCCHHHHHHHHHcCCCC------------cccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCC-CccCcCcCcccccC
Confidence 999999999999999884 467889999999999999999999999999997 78888999887643
No 85
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.95 E-value=1.3e-27 Score=156.58 Aligned_cols=127 Identities=21% Similarity=0.346 Sum_probs=115.8
Q ss_pred chhhccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHH
Q 037245 17 LPATMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIA 96 (215)
Q Consensus 17 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a 96 (215)
....+.++||.|+..|+.+++++|++++.++ +..+..|.||||+|+..++.+++++|+ +.+.+++.++..|.||||+|
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A 87 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLL-KNGADVNAVDAIGFTPLHLA 87 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCHHHHH
Confidence 3455667899999999999999999999998 899999999999999999999999999 56788899999999999999
Q ss_pred HHhCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcC
Q 037245 97 ARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKD 157 (215)
Q Consensus 97 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~ 157 (215)
+..|+.+++++|+++|+++ +..|..|.|||++|+..++.+++++|+++|
T Consensus 88 ~~~~~~~~v~~Ll~~g~~~------------~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 88 AFIGHLEIAEVLLKHGADV------------NAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHTCHHHHHHHHHTTCCT------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHcCCHHHHHHHHHcCCCC------------cCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999874 367889999999999999999999999865
No 86
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=3.6e-28 Score=159.23 Aligned_cols=132 Identities=16% Similarity=0.165 Sum_probs=118.4
Q ss_pred CCCCcchhhccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCC-CC
Q 037245 12 TMDQELPATMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLK-GE 90 (215)
Q Consensus 12 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~-g~ 90 (215)
.++..+..+ .+|||.|+..|+.+++++|++++.++ +..+..|.||||+|+. ++.+++++|+ +.+.+++.++.. |.
T Consensus 4 ~~~~~~~~g-~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll-~~g~~~~~~~~~~g~ 79 (136)
T 1d9s_A 4 GIHMLGGSS-DAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLL-LHGAEPNCADPATLT 79 (136)
T ss_dssp CCSCCCCCC-SCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHH-HHTCCSSCCBTTTTB
T ss_pred CccCCCCCC-ccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHH-HCCCCCCCcCCCCCC
Confidence 444444444 44699999999999999999999998 8999999999999999 9999999999 567788899999 99
Q ss_pred CHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCC
Q 037245 91 TPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRI 159 (215)
Q Consensus 91 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~ 159 (215)
||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..++.+++++|+++|++
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~ga~~------------~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVVLHRAGARL------------DVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTCCCC------------CCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC------------CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999874 46788999999999999999999999998864
No 87
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=8.8e-29 Score=170.18 Aligned_cols=143 Identities=13% Similarity=0.060 Sum_probs=125.1
Q ss_pred CchHHHHHHHcCCcchHHHHHHhccccccccC-CCCCCHHHHHHHhCCH----HHHHHHHhhcccccCCCCCCccccccc
Q 037245 55 GNTVLHMAIRFRNHKVIPEILRQQDSLLRKHN-LKGETPLHIAARVGDP----AIVSTILNYVPAITNGTESEPESLLRI 129 (215)
Q Consensus 55 g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~-~~g~t~l~~a~~~~~~----~~~~~Ll~~~~~~~~~~~~~~~~~~~~ 129 (215)
++++|+.|+..|+.+.++.++... .+.++ ..|.||||+|+..++. +++++|+++|+++ +.
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~---~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv------------n~ 70 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKG---YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI------------KS 70 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHS---SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS------------SC
T ss_pred cccHHHHHHHcCCHHHHHHHHhcC---cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC------------CC
Confidence 467899999999999999988543 23344 6799999999999975 5999999999884 46
Q ss_pred cCCCCCcHHHHHHhcCC------HHHHHHHHHcCCCCccccccCCC-cHHHHHHHcC-----CHHHHHHHHH-hCCCCcc
Q 037245 130 TDDEGNTPLHNAVRNKH------ENVVRMLVKKDRIPLGYINKAEQ-TPLAIAIDSS-----LTDIACFIID-QRPDSLD 196 (215)
Q Consensus 130 ~~~~~~~~l~~a~~~~~------~~~~~~ll~~~~~~~~~~~~~~~-t~l~~a~~~~-----~~~~~~~Ll~-~g~~~~~ 196 (215)
++..|+||||+|+..+. .+++++|+++|+++ +.+|..|. ||||+|+..+ ..+++++|++ +| ++++
T Consensus 71 ~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadi-n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~g-ad~~ 148 (186)
T 3t8k_A 71 RTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADI-TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSG-LQLL 148 (186)
T ss_dssp CCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCS-SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTT-CCTT
T ss_pred CCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCC-CccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcC-CCCc
Confidence 88999999999999886 68899999999998 88999999 9999999844 4569999999 89 9999
Q ss_pred ccCccCccHHHHHHHhCC
Q 037245 197 HRLPEELTLLHSAVMRQN 214 (215)
Q Consensus 197 ~~~~~g~t~l~~A~~~~~ 214 (215)
.+|..|.||||+|++.|+
T Consensus 149 ~~d~~G~TpL~~A~~~~~ 166 (186)
T 3t8k_A 149 IKDKWGLTALEFVKRCQK 166 (186)
T ss_dssp CCCTTSCCHHHHHHTTTC
T ss_pred ccCCCCCCHHHHHHHcCC
Confidence 999999999999999875
No 88
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=1e-26 Score=150.08 Aligned_cols=125 Identities=28% Similarity=0.417 Sum_probs=115.9
Q ss_pred ccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhC
Q 037245 21 MDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVG 100 (215)
Q Consensus 21 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 100 (215)
+.++||.|+..|+.+++++|++++.++ +..+..|.||||+|+..++.+++++|+ +.+..++.++..|.||||+|+..+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHH-HcCCCCcccCCCCCcHHHHHHHcC
Confidence 345799999999999999999999998 888999999999999999999999999 567788889999999999999999
Q ss_pred CHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCC
Q 037245 101 DPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRI 159 (215)
Q Consensus 101 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~ 159 (215)
+.+++++|+++|+++ +..+..|.|||++|+..++.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~g~~~------------~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLEAGADV------------NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHHTTCCT------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHcCCCC------------cccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999999999774 36788999999999999999999999999874
No 89
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.94 E-value=7.3e-27 Score=153.18 Aligned_cols=128 Identities=24% Similarity=0.324 Sum_probs=88.6
Q ss_pred ccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccc
Q 037245 50 TMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRI 129 (215)
Q Consensus 50 ~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~ 129 (215)
.++..|.||||+|+..|+.+++++|+ +.+.+++.++..|.||||+|+..++.+++++|+++|+++ +.
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~------------~~ 71 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLL-QNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV------------NT 71 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT------------TC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc------------cC
Confidence 34667777777777777777777777 445666677777777777777777777777777776653 34
Q ss_pred cCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhC
Q 037245 130 TDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQR 191 (215)
Q Consensus 130 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g 191 (215)
.+..|.||||+|+..++.+++++|+++|+++ +.++..|.||+++|+..+..+++++|.+.+
T Consensus 72 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 72 TGYQNDSPLHDAAKNGHVDIVKLLLSYGASR-NAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp CCGGGCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 5666777777777777777777777777765 567777777777777776666666665544
No 90
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.94 E-value=7.7e-27 Score=172.11 Aligned_cols=139 Identities=21% Similarity=0.223 Sum_probs=120.1
Q ss_pred CchHHHHHHHcCCcchHHHHHHhccccccc------cCCCCCCHHHHHHHh---CCHHHHHHHHhhcccccCCCCCCccc
Q 037245 55 GNTVLHMAIRFRNHKVIPEILRQQDSLLRK------HNLKGETPLHIAARV---GDPAIVSTILNYVPAITNGTESEPES 125 (215)
Q Consensus 55 g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~------~~~~g~t~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~~~ 125 (215)
..++|+.|+..++.+.++.|+ ..+.+++. .+..|.||||+|+.. ++.+++++|+++|+++
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll-~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv---------- 219 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAF-ANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL---------- 219 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHH-HTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT----------
T ss_pred hHHHHhhhhhccCHHHHHHHH-hcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC----------
Confidence 457799999999999999999 55666666 688999999999997 8999999999999874
Q ss_pred cccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccH
Q 037245 126 LLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTL 205 (215)
Q Consensus 126 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~ 205 (215)
+..|..|+||||+|+..|+.+++++|+++|+++ +.+|..|.|||++|+..++.+++++|+++| ++ .|.||
T Consensus 220 --n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~g-a~------~g~tp 289 (301)
T 2b0o_E 220 --DAKAADGNTALHYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQAQ-AG------TFAFP 289 (301)
T ss_dssp --TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCC-SCCCTTSCCHHHHHHHHTCHHHHHHHHHHH-HH------TTSSC
T ss_pred --CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHhc-CC------CCCCh
Confidence 468899999999999999999999999999997 789999999999999999999999999999 54 58999
Q ss_pred HHHHHHhCC
Q 037245 206 LHSAVMRQN 214 (215)
Q Consensus 206 l~~A~~~~~ 214 (215)
||+|+..|.
T Consensus 290 Lh~A~~~g~ 298 (301)
T 2b0o_E 290 LHVDYSWVI 298 (301)
T ss_dssp CC-------
T ss_pred hHHHHhcCC
Confidence 999998874
No 91
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.94 E-value=2.8e-26 Score=157.60 Aligned_cols=140 Identities=18% Similarity=0.283 Sum_probs=123.4
Q ss_pred hhccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccC-CCCCCHHHHHH
Q 037245 19 ATMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHN-LKGETPLHIAA 97 (215)
Q Consensus 19 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~-~~g~t~l~~a~ 97 (215)
..+.+|||.|+..|+.++++.|++ +.++ +..+..|.||||+|+..|+.+++++|+ +.+.+++.++ ..|.||||+|+
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLA-EAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCCHHHHHH
Confidence 456678999999999999999999 8888 889999999999999999999999999 5677888787 88999999999
Q ss_pred HhCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHH
Q 037245 98 RVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAID 177 (215)
Q Consensus 98 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~ 177 (215)
..|+.+++++|+++|+++ +..|..|+||||+|+..++ ...+.+++++|+.
T Consensus 119 ~~~~~~~v~~Ll~~ga~~------------~~~d~~g~tpl~~A~~~~~------------------~~~~~~~l~~a~~ 168 (183)
T 3deo_A 119 GYVRPEVVEALVELGADI------------EVEDERGLTALELAREILK------------------TTPKGNPMQFGRR 168 (183)
T ss_dssp HTTCHHHHHHHHHHTCCT------------TCCCTTSCCHHHHHHHHHH------------------TCCCCSHHHHHHH
T ss_pred hcCcHHHHHHHHHcCCCC------------cCCCCCCCCHHHHHHHhcc------------------CcccccHHHHHHH
Confidence 999999999999999874 4688999999999986321 1346789999999
Q ss_pred cCCHHHHHHHHHhC
Q 037245 178 SSLTDIACFIIDQR 191 (215)
Q Consensus 178 ~~~~~~~~~Ll~~g 191 (215)
.|..+++++|.++.
T Consensus 169 ~~~~~i~~~L~~~~ 182 (183)
T 3deo_A 169 IGLEKVINVLEGQV 182 (183)
T ss_dssp HHHHHHHHHHHTCC
T ss_pred cCHHHHHHHHHHhh
Confidence 99999999998653
No 92
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.94 E-value=3e-26 Score=164.35 Aligned_cols=140 Identities=18% Similarity=0.277 Sum_probs=125.1
Q ss_pred hhccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccC-CCCCCHHHHHH
Q 037245 19 ATMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHN-LKGETPLHIAA 97 (215)
Q Consensus 19 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~-~~g~t~l~~a~ 97 (215)
..+.+|||.|+..|+.++++.|++ +.++ +..+..|.||||+|+..|+.+++++|+ ..+.+++.++ ..|.||||+|+
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLA-EAGADLDHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHH-HTTCCTTCCCSSSCCCHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCcCCCCCCCCHHHHHH
Confidence 456788999999999999999999 8888 899999999999999999999999999 5677888887 88999999999
Q ss_pred HhCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHH
Q 037245 98 RVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAID 177 (215)
Q Consensus 98 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~ 177 (215)
..|+.+++++|+++|+++ +..+..|.||||+|+..+ ....+.|||++|+.
T Consensus 120 ~~g~~~~v~~Ll~~ga~~------------~~~d~~g~t~l~~A~~~~------------------~~~~~~~~l~~a~~ 169 (244)
T 3ui2_A 120 GYVRPEVVEALVELGADI------------EVEDERGLTALELAREIL------------------KTTPKGNPMQFGRR 169 (244)
T ss_dssp HTTCHHHHHHHHHTTCCT------------TCCCTTCCCHHHHHHHHH------------------TTCCCSSHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCC------------CCCCCCCCcHHHHHHHHH------------------hccCCCCHHHHHHH
Confidence 999999999999999884 468899999999998521 22457899999999
Q ss_pred cCCHHHHHHHHHhC
Q 037245 178 SSLTDIACFIIDQR 191 (215)
Q Consensus 178 ~~~~~~~~~Ll~~g 191 (215)
.|+.+++++|++++
T Consensus 170 ~g~~~iv~~L~~~~ 183 (244)
T 3ui2_A 170 IGLEKVINVLEGQV 183 (244)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred cChHHHHHHHHHhc
Confidence 99999999999874
No 93
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.94 E-value=2.8e-27 Score=155.17 Aligned_cols=115 Identities=26% Similarity=0.283 Sum_probs=78.3
Q ss_pred ccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccc
Q 037245 84 KHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGY 163 (215)
Q Consensus 84 ~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~ 163 (215)
.++..|.||||+|+..|+.+++++|+++|+++ +..+..|+||||+|+..++.+++++|+++|++. +.
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~------------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~ 71 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP------------NVKDHAGWTPLHEACNHGHLKVVELLLQHKALV-NT 71 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS------------CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC------------CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cC
Confidence 45666777777777777777777777766553 245666777777777777777777777766665 56
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHHHh
Q 037245 164 INKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMR 212 (215)
Q Consensus 164 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~ 212 (215)
.+..|.||||+|+..++.+++++|+++| ++++.++..|.||+++|+..
T Consensus 72 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~ 119 (137)
T 3c5r_A 72 TGYQNDSPLHDAAKNGHVDIVKLLLSYG-ASRNAVNIFGLRPVDYTDDE 119 (137)
T ss_dssp CCGGGCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCGGGGCCCH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHhhc
Confidence 6666777777777777777777777776 66777777777777766543
No 94
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.94 E-value=1.9e-29 Score=190.65 Aligned_cols=154 Identities=10% Similarity=0.094 Sum_probs=113.5
Q ss_pred cHHHHHHHHcCChHHHHHHHhcccCc--ccccCCCCchHHHHHHHcCCcchHHHHHHhcccc---ccccCCCCCCHHHHH
Q 037245 22 DHELLNVLRRGDEHQIRPIAGRMQNI--FSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSL---LRKHNLKGETPLHIA 96 (215)
Q Consensus 22 ~~~l~~a~~~~~~~~~~~ll~~~~~~--~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~---~~~~~~~g~t~l~~a 96 (215)
.+|||.|+..|+.+++++|++++... ....+..|.||||+|+..|+.+++++|++.+ ++ .+..+.+ .||||+|
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~g-ad~~~~~i~~~~-~TpLh~A 170 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELA-PTEIMAMIQAEN-YHAFRLA 170 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSC-TTTHHHHHSHHH-HHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCC-CCccccccCCCC-CCHHHHH
Confidence 36788888888888888888887621 0123456778888888888888888888544 21 1222222 8888888
Q ss_pred HHhCCHHHHHHHHhhcccccCCCCCCccccccc--cCCCCCcHHHHHH-hcCCHHHHHHHHHcCCCCccccccCCCcHHH
Q 037245 97 ARVGDPAIVSTILNYVPAITNGTESEPESLLRI--TDDEGNTPLHNAV-RNKHENVVRMLVKKDRIPLGYINKAEQTPLA 173 (215)
Q Consensus 97 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~a~-~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~ 173 (215)
+..|+.+++++|+++|+++. . .+..|.||||+|+ ..|+.+++++|+++|+ .|.|||+
T Consensus 171 a~~G~~eiv~~Ll~~ga~~~------------~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga--------~~~taL~ 230 (376)
T 2aja_A 171 AENGHLHVLNRLCELAPTEA------------TAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV--------MLAYAEI 230 (376)
T ss_dssp HHTTCHHHHHHHHHSCGGGH------------HHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH--------HHHHHHH
T ss_pred HHCCCHHHHHHHHHcCCccc------------hhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC--------ccchHHH
Confidence 88888888888888887632 3 5667888888888 8888888888888552 2678888
Q ss_pred HHHHcCCHHHHHHHHHhCCCCcccc
Q 037245 174 IAIDSSLTDIACFIIDQRPDSLDHR 198 (215)
Q Consensus 174 ~a~~~~~~~~~~~Ll~~g~~~~~~~ 198 (215)
.|+..|+.+++++|+++| ++++.+
T Consensus 231 ~Aa~~g~~evv~lL~~~g-a~~~~~ 254 (376)
T 2aja_A 231 HEFEYGEKYVNPFIARHV-NRLKEM 254 (376)
T ss_dssp CTTTTTTTTHHHHHHHHH-HHHHHH
T ss_pred HHHHCCCHHHHHHHHhcC-cccccc
Confidence 888888888888888888 665543
No 95
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.93 E-value=9.8e-27 Score=164.65 Aligned_cols=137 Identities=18% Similarity=0.171 Sum_probs=109.2
Q ss_pred cCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhh-cccccCCCCCCccccccc
Q 037245 51 MSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNY-VPAITNGTESEPESLLRI 129 (215)
Q Consensus 51 ~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~~~~~ 129 (215)
.+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..|+.+++++|+++ |++ ++.
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~------------~~~ 135 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECL-DNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE------------LNQ 135 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC------------CCC
T ss_pred cccccccccccccccCcHHHHHHHH-hCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC------------ccc
Confidence 4556789999999999999999999 46677888999999999999999999999999998 766 446
Q ss_pred cCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccC
Q 037245 130 TDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEE 202 (215)
Q Consensus 130 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g 202 (215)
.+..|+||||+|+..|+.+++++|+++|+++ +.++..|.|||++|+..+..++++.|++.+ +...+.+..|
T Consensus 136 ~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~-~~~~~~~~~~ 206 (222)
T 3ehr_A 136 QNKLGDTALHAAAWKGYADIVQLLLAKGART-DLRNIEKKLAFDMATNAACASLLKKKQGTD-AVRTLSNAED 206 (222)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHHTCCS-CCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-ccccCCCCCHHHHhcchhHHHHHHHHhccc-hhhhccchhh
Confidence 8889999999999999999999999999987 789999999999999999999999999999 7777766554
No 96
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.93 E-value=2.7e-26 Score=169.18 Aligned_cols=137 Identities=19% Similarity=0.259 Sum_probs=119.3
Q ss_pred HHHHHHHHcCChHHHHHHHhcccCcccc------cCCCCchHHHHHHHc---CCcchHHHHHHhccccccccCCCCCCHH
Q 037245 23 HELLNVLRRGDEHQIRPIAGRMQNIFST------MSPRGNTVLHMAIRF---RNHKVIPEILRQQDSLLRKHNLKGETPL 93 (215)
Q Consensus 23 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~------~~~~g~t~L~~A~~~---~~~~~~~~ll~~~~~~~~~~~~~g~t~l 93 (215)
.+|+.|+..|+.+.++.|+..+.++ +. .+..|.||||+|+.. ++.+++++|+ ..+++++.+|..|.|||
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~-~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll-~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFII-QNGGHLDAKAADGNTAL 230 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCT-TSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHH-HHSSCTTCCCTTCCCHH
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcc-cccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHH-hcCCCCCCCCCCCCCHH
Confidence 4699999999999999999999998 65 688999999999997 8999999999 55788999999999999
Q ss_pred HHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHH
Q 037245 94 HIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLA 173 (215)
Q Consensus 94 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~ 173 (215)
|+|+..|+.+++++|+++|+++ +..|..|.|||++|+..++.+++++|+++|++ .|.||||
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad~------------~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh 291 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRALV------------GTVNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLH 291 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCC------------SCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC
T ss_pred HHHHHcCCHHHHHHHHHcCCCC------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhH
Confidence 9999999999999999999884 46889999999999999999999999998764 4789999
Q ss_pred HHHHcCC
Q 037245 174 IAIDSSL 180 (215)
Q Consensus 174 ~a~~~~~ 180 (215)
+|+..|+
T Consensus 292 ~A~~~g~ 298 (301)
T 2b0o_E 292 VDYSWVI 298 (301)
T ss_dssp -------
T ss_pred HHHhcCC
Confidence 9998875
No 97
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=2.6e-27 Score=162.80 Aligned_cols=129 Identities=19% Similarity=0.135 Sum_probs=108.6
Q ss_pred CCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccC
Q 037245 52 SPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITD 131 (215)
Q Consensus 52 ~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~ 131 (215)
+..|.||||+|+..|+.++++.|++ +.+++.++..|.||||+|+..|+.+++++|+++|+++. ..+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~------------~~~ 106 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD------------HRD 106 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT------------CCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC------------cCC
Confidence 4578899999999999999999995 77888899999999999999999999999999987744 455
Q ss_pred -CCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHH
Q 037245 132 -DEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAV 210 (215)
Q Consensus 132 -~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~ 210 (215)
..|+||||+|+..++.+++++|+++|+++ +.++..|.||||+|++.++. ..+.+++++|+
T Consensus 107 ~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~------------------~~~~~~l~~a~ 167 (183)
T 3deo_A 107 MRGGLTALHMAAGYVRPEVVEALVELGADI-EVEDERGLTALELAREILKT------------------TPKGNPMQFGR 167 (183)
T ss_dssp SSSSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHHHT------------------CCCCSHHHHHH
T ss_pred CCCCCCHHHHHHhcCcHHHHHHHHHcCCCC-cCCCCCCCCHHHHHHHhccC------------------cccccHHHHHH
Confidence 78999999999999999999999999887 78899999999999874322 23567888887
Q ss_pred HhC
Q 037245 211 MRQ 213 (215)
Q Consensus 211 ~~~ 213 (215)
..|
T Consensus 168 ~~~ 170 (183)
T 3deo_A 168 RIG 170 (183)
T ss_dssp HHH
T ss_pred HcC
Confidence 765
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=7.8e-26 Score=145.54 Aligned_cols=113 Identities=18% Similarity=0.174 Sum_probs=100.6
Q ss_pred CCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccc
Q 037245 86 NLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYIN 165 (215)
Q Consensus 86 ~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~ 165 (215)
+..|.||||.|+..|+.+++++|+++|+++ +..+..|+||||+|+..++.+++++|+++|+++ +.++
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d 70 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDV------------NRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPD 70 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCT------------TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCC
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCc------------CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCC
Confidence 456789999999999999999999998773 367888999999999999999999999999887 7889
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHHHh
Q 037245 166 KAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMR 212 (215)
Q Consensus 166 ~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~ 212 (215)
..|+||||+|+..++.+++++|+++| ++++.++..|.||||+|...
T Consensus 71 ~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 71 KHHITPLLSAVYEGHVSCVKLLLSKG-ADKTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHCCCH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHhCCH
Confidence 99999999999999999999999999 99999999999999998543
No 99
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.93 E-value=1.7e-27 Score=180.00 Aligned_cols=165 Identities=11% Similarity=0.042 Sum_probs=131.8
Q ss_pred HHHHHHH-cCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhcccc--ccccCCCCCCHHHHHHHhC
Q 037245 24 ELLNVLR-RGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSL--LRKHNLKGETPLHIAARVG 100 (215)
Q Consensus 24 ~l~~a~~-~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~--~~~~~~~g~t~l~~a~~~~ 100 (215)
.++.+.. .++.+.++++++++.+. .||||+|+..|+.+++++|++.+... ....+..|.||||+|+..|
T Consensus 68 ~~~~a~~~~~~~~~~~~l~~~g~~~--------~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G 139 (376)
T 2aja_A 68 CLYYAHYNRNAKQLWSDAHKKGIKS--------EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENG 139 (376)
T ss_dssp HHHHHHTTTTCTTHHHHHHHHTCCH--------HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTT
T ss_pred HHHHHHhcCCCHHHHHHHHHcCCCc--------CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcC
Confidence 4555555 57888899998887765 59999999999999999999543311 1123456789999999999
Q ss_pred CHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccc--cccCCCcHHHHHH-H
Q 037245 101 DPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGY--INKAEQTPLAIAI-D 177 (215)
Q Consensus 101 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~--~~~~~~t~l~~a~-~ 177 (215)
+.+++++|+++|++... .+..+.+ .||||+|+..|+.+++++|+++|++. +. .+..|.||||+|+ .
T Consensus 140 ~~eiv~~Ll~~gad~~~---------~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~-~~~~~d~~g~TpL~~Aa~~ 208 (376)
T 2aja_A 140 HLHVLNRLCELAPTEIM---------AMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTE-ATAMIQAENYYAFRWAAVG 208 (376)
T ss_dssp CHHHHHHHHHSCTTTHH---------HHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGG-HHHHHHHHHHHHHHHHHST
T ss_pred CHHHHHHHHhCCCCccc---------cccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCcc-chhccCCCCCCHHHHHHHH
Confidence 99999999999964210 0112223 89999999999999999999999886 44 7788999999999 9
Q ss_pred cCCHHHHHHHHHhCCCCccccCccCccHHHHHHHhCCC
Q 037245 178 SSLTDIACFIIDQRPDSLDHRLPEELTLLHSAVMRQNY 215 (215)
Q Consensus 178 ~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~ 215 (215)
.|+.+++++|+++| + .|.|||++|+.+|+.
T Consensus 209 ~G~~eiv~~Ll~~g-a-------~~~taL~~Aa~~g~~ 238 (376)
T 2aja_A 209 RGHHNVINFLLDCP-V-------MLAYAEIHEFEYGEK 238 (376)
T ss_dssp TCCHHHHHHHTTSH-H-------HHHHHHHCTTTTTTT
T ss_pred CCCHHHHHHHHhCC-C-------ccchHHHHHHHCCCH
Confidence 99999999999977 3 288999999998863
No 100
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=1.1e-25 Score=144.89 Aligned_cols=110 Identities=20% Similarity=0.215 Sum_probs=69.9
Q ss_pred CCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCC
Q 037245 53 PRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDD 132 (215)
Q Consensus 53 ~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 132 (215)
..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..++.+++++|+++|+++ +..|.
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------------~~~d~ 71 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYV-AKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI------------NAPDK 71 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHH-HTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT------------TCCCT
T ss_pred cccchHHHHHHHcCCHHHHHHHH-HcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC------------CcCCC
Confidence 44566666666666666666666 344555666666666666666666666666666666552 24566
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHH
Q 037245 133 EGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAI 176 (215)
Q Consensus 133 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~ 176 (215)
.|+||||+|+..++.+++++|+++|+++ +.++..|.||+++|.
T Consensus 72 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 72 HHITPLLSAVYEGHVSCVKLLLSKGADK-TVKGPDGLTAFEATD 114 (123)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHhC
Confidence 6666666666666666666666666665 556666666766663
No 101
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=3.5e-25 Score=158.79 Aligned_cols=130 Identities=18% Similarity=0.116 Sum_probs=113.7
Q ss_pred CCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccC
Q 037245 52 SPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITD 131 (215)
Q Consensus 52 ~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~ 131 (215)
+..|.||||+|+..|+.+++++|++ +.+++.++..|.||||+|+..|+.+++++|+++|+++. ..+
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~------------~~~ 107 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD------------HRD 107 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT--TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT------------CCC
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC------------cCC
Confidence 4568999999999999999999995 77889999999999999999999999999999998854 455
Q ss_pred -CCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHHHHHH
Q 037245 132 -DEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLLHSAV 210 (215)
Q Consensus 132 -~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~A~ 210 (215)
..|+||||+|+..|+.+++++|+++|+++ +.++..|.||||+|+..+. ...+.|||++|+
T Consensus 108 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~~~------------------~~~~~~~l~~a~ 168 (244)
T 3ui2_A 108 MRGGLTALHMAAGYVRPEVVEALVELGADI-EVEDERGLTALELAREILK------------------TTPKGNPMQFGR 168 (244)
T ss_dssp SSSCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHHT------------------TCCCSSHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHHHh------------------ccCCCCHHHHHH
Confidence 78999999999999999999999999987 7899999999999986321 245789999999
Q ss_pred HhCC
Q 037245 211 MRQN 214 (215)
Q Consensus 211 ~~~~ 214 (215)
..|+
T Consensus 169 ~~g~ 172 (244)
T 3ui2_A 169 RIGL 172 (244)
T ss_dssp HHHH
T ss_pred HcCh
Confidence 8764
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=1.1e-25 Score=159.17 Aligned_cols=127 Identities=20% Similarity=0.254 Sum_probs=110.7
Q ss_pred ccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhC
Q 037245 21 MDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVG 100 (215)
Q Consensus 21 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 100 (215)
+.++||.|+..|+.+++++|++.+.++ +..+..|.||||+|+..|+.+++++|++..+.+++.++..|.||||+|+..|
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~ 151 (222)
T 3ehr_A 73 IDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKG 151 (222)
T ss_dssp ESCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHT
T ss_pred cccccccccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcC
Confidence 356799999999999999999999998 8899999999999999999999999996558899999999999999999999
Q ss_pred CHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC
Q 037245 101 DPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIP 160 (215)
Q Consensus 101 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~ 160 (215)
+.+++++|+++|+++ +..+..|.|||++|+..+..++++.|++.++..
T Consensus 152 ~~~~v~~Ll~~ga~~------------~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 152 YADIVQLLLAKGART------------DLRNIEKKLAFDMATNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp CHHHHHHHHHHTCCS------------CCCCTTSCCHHHHCCSHHHHHHHC---------
T ss_pred CHHHHHHHHHcCCCC------------ccccCCCCCHHHHhcchhHHHHHHHHhccchhh
Confidence 999999999999884 468899999999999999999999999988876
No 103
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.92 E-value=3.4e-24 Score=168.28 Aligned_cols=138 Identities=19% Similarity=0.173 Sum_probs=114.2
Q ss_pred CCchHHHHHHHcCCcchHHHHHHhcccccccc------CCCCCCHHHHHHH---hCCHHHHHHHHhhcccccCCCCCCcc
Q 037245 54 RGNTVLHMAIRFRNHKVIPEILRQQDSLLRKH------NLKGETPLHIAAR---VGDPAIVSTILNYVPAITNGTESEPE 124 (215)
Q Consensus 54 ~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~------~~~g~t~l~~a~~---~~~~~~~~~Ll~~~~~~~~~~~~~~~ 124 (215)
...+.||.|+..|+.+.++.|+ ..+.+++.+ +..|.||||+|+. .|+.+++++|+++|+++
T Consensus 131 ~~~~~L~~A~~~g~~~~v~~ll-~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v--------- 200 (497)
T 3lvq_E 131 PEPQRLWTAICNRDLLSVLEAF-ANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL--------- 200 (497)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHH-HTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT---------
T ss_pred ccHHHHHHHHhccCHHHHHHHH-hhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC---------
Confidence 3447899999999999999999 556777766 8899999999977 89999999999999884
Q ss_pred ccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCcc
Q 037245 125 SLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELT 204 (215)
Q Consensus 125 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 204 (215)
+..|..|+||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|+++| ++++.......+
T Consensus 201 ---n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~g-a~~~~~~~h~~~ 275 (497)
T 3lvq_E 201 ---DAKAADGNTALHYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQAQ-AGTFAFPLHVDY 275 (497)
T ss_dssp ---TCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCC-SCCCTTCCCHHHHHHHTTCHHHHHHHHHTC-C-----------
T ss_pred ---CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHhC-CCCCCCcceeec
Confidence 468899999999999999999999999999997 789999999999999999999999999999 887765443333
Q ss_pred HH
Q 037245 205 LL 206 (215)
Q Consensus 205 ~l 206 (215)
++
T Consensus 276 ~~ 277 (497)
T 3lvq_E 276 SW 277 (497)
T ss_dssp --
T ss_pred cc
Confidence 33
No 104
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.91 E-value=3.5e-24 Score=161.41 Aligned_cols=144 Identities=18% Similarity=0.204 Sum_probs=93.8
Q ss_pred CCchHHHHHHHc-CCcchHHHHHHhccccccccC--CCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCcccccccc
Q 037245 54 RGNTVLHMAIRF-RNHKVIPEILRQQDSLLRKHN--LKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRIT 130 (215)
Q Consensus 54 ~g~t~L~~A~~~-~~~~~~~~ll~~~~~~~~~~~--~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~ 130 (215)
.+.|+||.|+.. ++.+++++|+ ..+.+++..+ ..|.||||+|+..|+.+++++|+++|+++ +..
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL-~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv------------n~~ 264 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADAL-AHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANV------------NQA 264 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHH-HTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT------------TCC
T ss_pred CCCcHHHHHHHccCCHHHHHHHH-HcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC------------CCC
Confidence 345678888877 7888887777 4566666666 67778888888888888888888777663 356
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCC--CCccccCccCccHHHH
Q 037245 131 DDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRP--DSLDHRLPEELTLLHS 208 (215)
Q Consensus 131 ~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~--~~~~~~~~~g~t~l~~ 208 (215)
|..|+||||+|+..++.+++++|+++|+++ +..|..|.||||+|+..++.+++++|+..+. ......+..+.|++++
T Consensus 265 d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~-~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i 343 (368)
T 3jue_A 265 DSAGRGPLHHATILGHTGLACLFLKRGADL-GARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDI 343 (368)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC------------------
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHCcCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHH
Confidence 777788888888888888888888877776 6777778888888888888888887776652 2233345556666665
Q ss_pred HHH
Q 037245 209 AVM 211 (215)
Q Consensus 209 A~~ 211 (215)
+..
T Consensus 344 ~~~ 346 (368)
T 3jue_A 344 FRD 346 (368)
T ss_dssp ---
T ss_pred HHH
Confidence 543
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.91 E-value=7.9e-24 Score=159.51 Aligned_cols=156 Identities=18% Similarity=0.169 Sum_probs=114.2
Q ss_pred cHHHHHHHHc-CChHHHHHHHhcccCcccccC--CCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHH
Q 037245 22 DHELLNVLRR-GDEHQIRPIAGRMQNIFSTMS--PRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAAR 98 (215)
Q Consensus 22 ~~~l~~a~~~-~~~~~~~~ll~~~~~~~~~~~--~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~ 98 (215)
.++||.|+.. |+.++++.|+++|.++ +..+ ..|.||||+|+..++.+++++|+ ..+++++.+|..|.||||+|+.
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL-~~Gadvn~~d~~G~TpLh~A~~ 277 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLL-QNGANVNQADSAGRGPLHHATI 277 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHH
T ss_pred CcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHH
Confidence 4579999999 9999999999999999 7777 89999999999999999999999 5688899999999999999999
Q ss_pred hCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCc--cccccCCCcHHHHHH
Q 037245 99 VGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPL--GYINKAEQTPLAIAI 176 (215)
Q Consensus 99 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~--~~~~~~~~t~l~~a~ 176 (215)
.|+.+++++|+++|+++ +..|..|.||||+|+..++.+++++|+..+.... ...+..+.|+++++.
T Consensus 278 ~g~~~~v~~LL~~Gad~------------~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~ 345 (368)
T 3jue_A 278 LGHTGLACLFLKRGADL------------GARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFR 345 (368)
T ss_dssp HTCHHHHHHHHHTTCCT------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC--------------------
T ss_pred cCcHHHHHHHHHCcCCC------------CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHH
Confidence 99999999999999884 4688999999999999999999999998754331 234456778887766
Q ss_pred HcCC--HHHHHHHHHhC
Q 037245 177 DSSL--TDIACFIIDQR 191 (215)
Q Consensus 177 ~~~~--~~~~~~Ll~~g 191 (215)
.... .+..+.|.+++
T Consensus 346 ~~~~~~~~~~ekl~r~~ 362 (368)
T 3jue_A 346 DFSLMASDDPEKLSRRS 362 (368)
T ss_dssp -----------------
T ss_pred HHHhhcCCCHHHHHhcC
Confidence 5432 23344555444
No 106
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.90 E-value=1.7e-23 Score=164.30 Aligned_cols=133 Identities=20% Similarity=0.249 Sum_probs=113.9
Q ss_pred HHHHHHHHcCChHHHHHHHhcccCccccc------CCCCchHHHHHHH---cCCcchHHHHHHhccccccccCCCCCCHH
Q 037245 23 HELLNVLRRGDEHQIRPIAGRMQNIFSTM------SPRGNTVLHMAIR---FRNHKVIPEILRQQDSLLRKHNLKGETPL 93 (215)
Q Consensus 23 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~~------~~~g~t~L~~A~~---~~~~~~~~~ll~~~~~~~~~~~~~g~t~l 93 (215)
..||.|+..|+.+.++.|+++|+++ +.. +..|.||||+|+. .|+.+++++|+ ..+++++.+|..|.|||
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll-~~ga~vn~~d~~g~TpL 211 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFII-QNGGHLDAKAADGNTAL 211 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHH-HHSCCTTCCCSSSCCHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhcccccHHHHHHHH-HcCCCCCccCCCCCcHH
Confidence 4699999999999999999999998 665 8899999999976 89999999999 56788999999999999
Q ss_pred HHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHH
Q 037245 94 HIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLA 173 (215)
Q Consensus 94 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~ 173 (215)
|+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|+++|+++ +. +|+|
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~------------~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~-~~------~~~h 272 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALV------------GTVNEAGETALDIARKKHHKECEELLEQAQAGT-FA------FPLH 272 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCC------------SCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC---------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCC------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCC-CC------Ccce
Confidence 9999999999999999999884 468999999999999999999999999999987 32 4666
Q ss_pred HHH
Q 037245 174 IAI 176 (215)
Q Consensus 174 ~a~ 176 (215)
.+.
T Consensus 273 ~~~ 275 (497)
T 3lvq_E 273 VDY 275 (497)
T ss_dssp ---
T ss_pred eec
Confidence 554
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.90 E-value=3.5e-23 Score=126.51 Aligned_cols=91 Identities=32% Similarity=0.511 Sum_probs=84.6
Q ss_pred CCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccC
Q 037245 88 KGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKA 167 (215)
Q Consensus 88 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~ 167 (215)
+|.||||+|+..|+.+++++|+++|+++ +.++..|+||||+|+..++.+++++|+++|+++ +.++..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------------n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~ 67 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV------------NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKN 67 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC------------cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCC
Confidence 4899999999999999999999999774 468899999999999999999999999999987 789999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhC
Q 037245 168 EQTPLAIAIDSSLTDIACFIIDQR 191 (215)
Q Consensus 168 ~~t~l~~a~~~~~~~~~~~Ll~~g 191 (215)
|.||||+|+..++.+++++|+++|
T Consensus 68 g~t~l~~A~~~~~~~~~~~Ll~~g 91 (93)
T 1n0q_A 68 GRTPLHLAARNGHLEVVKLLLEAG 91 (93)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999999999998
No 108
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.90 E-value=8.2e-23 Score=149.02 Aligned_cols=123 Identities=19% Similarity=0.209 Sum_probs=110.2
Q ss_pred chHHHHHHHcCCcchHHHHHHhcccc------ccccCCCCCCHHHHHHHh---CCHHHHHHHHhhcccccCCCCCCcccc
Q 037245 56 NTVLHMAIRFRNHKVIPEILRQQDSL------LRKHNLKGETPLHIAARV---GDPAIVSTILNYVPAITNGTESEPESL 126 (215)
Q Consensus 56 ~t~L~~A~~~~~~~~~~~ll~~~~~~------~~~~~~~g~t~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~~~~ 126 (215)
.++|+.|+..++.+.++.+++. +.+ ++..+..|.||||+|+.. ++.+++++|+++|+++
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~-g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i----------- 198 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYAD-GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL----------- 198 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT-TCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-----------
T ss_pred hhhhhhHhhhcccHHHHHHHHh-hcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-----------
Confidence 4689999999999999999854 444 444578899999999999 8999999999999884
Q ss_pred ccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHHHHHHHcCCHHHHHHHHHhCC
Q 037245 127 LRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSLTDIACFIIDQRP 192 (215)
Q Consensus 127 ~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~ 192 (215)
+..|..|+||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 199 -n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 199 -DKQTGKGSTALHYCCLTDNAECLKLLLRGKASI-EIANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp -TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred -cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 468889999999999999999999999999987 7899999999999999999999999999993
No 109
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.90 E-value=5e-23 Score=150.16 Aligned_cols=125 Identities=23% Similarity=0.314 Sum_probs=114.1
Q ss_pred HHHHHHHHcCChHHHHHHHhcccCc-----ccccCCCCchHHHHHHHc---CCcchHHHHHHhccccccccCCCCCCHHH
Q 037245 23 HELLNVLRRGDEHQIRPIAGRMQNI-----FSTMSPRGNTVLHMAIRF---RNHKVIPEILRQQDSLLRKHNLKGETPLH 94 (215)
Q Consensus 23 ~~l~~a~~~~~~~~~~~ll~~~~~~-----~~~~~~~g~t~L~~A~~~---~~~~~~~~ll~~~~~~~~~~~~~g~t~l~ 94 (215)
.+|+.|+..|+.+.++.++..|.++ ++..+..|.||||+|+.. ++.+++++|+ ..+++++.+|..|.||||
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll-~~ga~in~~d~~g~TpLh 210 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLV-QNSGNLDKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHH-HHCSCTTCCCTTCCCHHH
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHH-HCCCCccccCCCCCCHHH
Confidence 4699999999999999999999885 144588899999999999 8999999999 567889999999999999
Q ss_pred HHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC
Q 037245 95 IAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIP 160 (215)
Q Consensus 95 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~ 160 (215)
+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|+++|+..
T Consensus 211 ~A~~~g~~~~v~~Ll~~gad~------------~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLRGKASI------------EIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHcCCCC------------CCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999884 468999999999999999999999999998765
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.90 E-value=1e-23 Score=133.97 Aligned_cols=109 Identities=26% Similarity=0.326 Sum_probs=99.4
Q ss_pred ccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccc
Q 037245 84 KHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGY 163 (215)
Q Consensus 84 ~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~ 163 (215)
.+|..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..++.+++++|+++|++. +.
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~------------~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~ 70 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADV------------NARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV-NA 70 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS------------SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT-TC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC------------CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-cc
Confidence 47889999999999999999999999998774 367889999999999999999999999999987 78
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCccCccHH
Q 037245 164 INKAEQTPLAIAIDSSLTDIACFIIDQRPDSLDHRLPEELTLL 206 (215)
Q Consensus 164 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l 206 (215)
.+..|.||||+|+..++.+++++|+++| ++++.++..|.+|-
T Consensus 71 ~d~~g~tpl~~A~~~~~~~~~~~Ll~~g-a~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 71 RSKDGNTPEHLAKKNGHHEIVKLLDAKG-ADVNARSWGSSHHH 112 (115)
T ss_dssp CCTTCCCTTHHHHTTTCHHHHHHHHTTS-SSHHHHSCCCC---
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCcCCccccccc
Confidence 8999999999999999999999999999 99999999998874
No 111
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.89 E-value=8.8e-23 Score=124.68 Aligned_cols=91 Identities=35% Similarity=0.548 Sum_probs=56.1
Q ss_pred CchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCCC
Q 037245 55 GNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEG 134 (215)
Q Consensus 55 g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (215)
|.||||+|+..++.+++++|+ +.+.+++.++..|.||||+|+..++.+++++|+++|+++ +..|..|
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll-~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~------------~~~d~~g 68 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV------------NAKDKNG 68 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT------------TCCCTTS
T ss_pred CCcHHHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC------------CccCCCC
Confidence 556666666666666666666 345555666666666666666666666666666666552 2455566
Q ss_pred CcHHHHHHhcCCHHHHHHHHHcCC
Q 037245 135 NTPLHNAVRNKHENVVRMLVKKDR 158 (215)
Q Consensus 135 ~~~l~~a~~~~~~~~~~~ll~~~~ 158 (215)
+||||+|+..++.+++++|+++|+
T Consensus 69 ~t~l~~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 69 RTPLHLAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCC
Confidence 666666666666666666666554
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.88 E-value=1.4e-22 Score=128.73 Aligned_cols=109 Identities=28% Similarity=0.354 Sum_probs=91.1
Q ss_pred ccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccc
Q 037245 50 TMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRI 129 (215)
Q Consensus 50 ~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~ 129 (215)
.+|..|.||||+|+..++.+++++|+ ..+.+++.++..|.||||+|+..++.+++++|+++|+++ +.
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~------------~~ 70 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLL-SKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV------------NA 70 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHT-TTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT------------TC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC------------cc
Confidence 46788999999999999999999988 556778888889999999999999999999999988774 35
Q ss_pred cCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccccCCCcHH
Q 037245 130 TDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYINKAEQTPL 172 (215)
Q Consensus 130 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l 172 (215)
.+..|.||||+|+..++.+++++|+++|+++ +..+..|.+|-
T Consensus 71 ~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~-n~~~~~~~~~~ 112 (115)
T 2l6b_A 71 RSKDGNTPEHLAKKNGHHEIVKLLDAKGADV-NARSWGSSHHH 112 (115)
T ss_dssp CCTTCCCTTHHHHTTTCHHHHHHHHTTSSSH-HHHSCCCC---
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCccccccc
Confidence 7788999999999999999999999999887 67777777763
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.81 E-value=1.8e-19 Score=113.31 Aligned_cols=90 Identities=29% Similarity=0.347 Sum_probs=50.6
Q ss_pred cCCCCCCHHHHHHHhCCHHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCcccc
Q 037245 85 HNLKGETPLHIAARVGDPAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHENVVRMLVKKDRIPLGYI 164 (215)
Q Consensus 85 ~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~ 164 (215)
.+.+|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..++.+++++|+++|+++ +.+
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i------------~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~ 86 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGADV------------AAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV-XAQ 86 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCCT------------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCC
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCCC------------CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ccc
Confidence 3445555666666666666666666555442 234555566666666666666666666655554 455
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHH
Q 037245 165 NKAEQTPLAIAIDSSLTDIACFI 187 (215)
Q Consensus 165 ~~~~~t~l~~a~~~~~~~~~~~L 187 (215)
+..|.||||+|+..++.+++++|
T Consensus 87 d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 87 DKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHH
T ss_pred ccCCCcHHHHHHHcCCHHHHHHh
Confidence 55566666666666666665554
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.79 E-value=5.5e-19 Score=111.07 Aligned_cols=88 Identities=19% Similarity=0.379 Sum_probs=82.0
Q ss_pred hhccHHHHHHHHcCChHHHHHHHhcccCcccccCCCCchHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHH
Q 037245 19 ATMDHELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGNTVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAAR 98 (215)
Q Consensus 19 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~ 98 (215)
..+.++||.|+..|+.+++++|++++.++ +..+..|.||||+|+..++.+++++|+ ..+++++.++..|.||||+|+.
T Consensus 22 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll-~~ga~~~~~d~~g~tpl~~A~~ 99 (110)
T 2zgd_A 22 SDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLL-EAGADVXAQDKFGKTAFDISID 99 (110)
T ss_dssp CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHH
T ss_pred CccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCccccccCCCcHHHHHHH
Confidence 44566799999999999999999999998 889999999999999999999999999 5578899999999999999999
Q ss_pred hCCHHHHHHH
Q 037245 99 VGDPAIVSTI 108 (215)
Q Consensus 99 ~~~~~~~~~L 108 (215)
.|+.+++++|
T Consensus 100 ~~~~~~~~~L 109 (110)
T 2zgd_A 100 NGNEDLAEIL 109 (110)
T ss_dssp HTCHHHHHHH
T ss_pred cCCHHHHHHh
Confidence 9999999987
No 115
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=61.97 E-value=19 Score=27.42 Aligned_cols=51 Identities=24% Similarity=0.309 Sum_probs=38.5
Q ss_pred HHHHHcCChHHHHHHHhcccCcc-----------ccc--CCCCchHHHHHHHcCCcchHHHHHH
Q 037245 26 LNVLRRGDEHQIRPIAGRMQNIF-----------STM--SPRGNTVLHMAIRFRNHKVIPEILR 76 (215)
Q Consensus 26 ~~a~~~~~~~~~~~ll~~~~~~~-----------~~~--~~~g~t~L~~A~~~~~~~~~~~ll~ 76 (215)
+..+..|+...++..+..|.++. |.. -..|.|.+|.|++..+-+++..|+.
T Consensus 27 c~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 27 CVGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 46677899999999999998851 222 2357788888888888888877774
No 116
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=55.23 E-value=11 Score=17.75 Aligned_cols=20 Identities=15% Similarity=0.341 Sum_probs=15.4
Q ss_pred HHHHHHHcCChHHHHHHHhc
Q 037245 24 ELLNVLRRGDEHQIRPIAGR 43 (215)
Q Consensus 24 ~l~~a~~~~~~~~~~~ll~~ 43 (215)
-+..|+..|+++.++.|-.+
T Consensus 16 qiyvA~seGd~etv~~Le~Q 35 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLKAK 35 (40)
T ss_dssp HHHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHHH
Confidence 47788889999888877543
No 117
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=45.10 E-value=52 Score=25.19 Aligned_cols=58 Identities=22% Similarity=0.255 Sum_probs=37.2
Q ss_pred HhCCHHHHHHHHhhcccccCCCCCCcccccccc--CCCCCcHHHHHHhcCCHHHHHHHHH
Q 037245 98 RVGDPAIVSTILNYVPAITNGTESEPESLLRIT--DDEGNTPLHNAVRNKHENVVRMLVK 155 (215)
Q Consensus 98 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~a~~~~~~~~~~~ll~ 155 (215)
..|+...|+..+..|.+..-........++|.. ...|.|.+|+|++..+.+++..|+.
T Consensus 31 ~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 31 VEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 356777777766666554332222222222222 3468999999999999999998886
No 118
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=21.48 E-value=1.8e+02 Score=19.17 Aligned_cols=129 Identities=16% Similarity=0.141 Sum_probs=80.0
Q ss_pred HHHHHHHHcCChHHHHHHHhcccCcccccCCCCc-hHHHHHHHcCCcchHHHHHHhccccccccCCCCCCHHHHHHHhCC
Q 037245 23 HELLNVLRRGDEHQIRPIAGRMQNIFSTMSPRGN-TVLHMAIRFRNHKVIPEILRQQDSLLRKHNLKGETPLHIAARVGD 101 (215)
Q Consensus 23 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~-t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 101 (215)
+.+-.|+..|+.+..-.+.....+. .-+ ..=..|...|+++++..-.++.+ |..+ .+.+....|+
T Consensus 10 ~rF~LAL~lg~l~~A~e~a~~l~~~------~~Wk~Lg~~AL~~gn~~lAe~cy~~~~------D~~~--L~~Ly~~tg~ 75 (177)
T 3mkq_B 10 IRFDLALEYGNLDAALDEAKKLNDS------ITWERLIQEALAQGNASLAEMIYQTQH------SFDK--LSFLYLVTGD 75 (177)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHCCH------HHHHHHHHHHHHTTCHHHHHHHHHHTT------CHHH--HHHHHHHHTC
T ss_pred HHHHHHHhcCCHHHHHHHHHHhCCH------HHHHHHHHHHHHcCChHHHHHHHHHhC------CHHH--HHHHHHHhCC
Confidence 3488999999999887776543221 112 23345677889999887774432 2112 3445566777
Q ss_pred HHHHHHHHhhcccccCCCCCCccccccccCCCCCcHHHHHHhcCCH-HHHHHHHHcCCCCccccccCCCcHHHHHHHcCC
Q 037245 102 PAIVSTILNYVPAITNGTESEPESLLRITDDEGNTPLHNAVRNKHE-NVVRMLVKKDRIPLGYINKAEQTPLAIAIDSSL 180 (215)
Q Consensus 102 ~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~-~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 180 (215)
.+-++.+.+.- ....+-+..++.+...|++ ++++.|.+.|..+ -+..+|.-+|.
T Consensus 76 ~e~L~kla~iA----------------~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~~---------eA~~~A~t~g~ 130 (177)
T 3mkq_B 76 VNKLSKMQNIA----------------QTREDFGSMLLNTFYNNSTKERSSIFAEGGSLP---------LAYAVAKANGD 130 (177)
T ss_dssp HHHHHHHHHHH----------------HHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHH---------HHHHHHHHTTC
T ss_pred HHHHHHHHHHH----------------HHCccHHHHHHHHHHcCCHHHHHHHHHHCCChH---------HHHHHHHHcCc
Confidence 77766664432 1122334566777777776 5777777654433 26667788888
Q ss_pred HHHHHHHHHh
Q 037245 181 TDIACFIIDQ 190 (215)
Q Consensus 181 ~~~~~~Ll~~ 190 (215)
.++++.+++.
T Consensus 131 ~~~a~~~~~~ 140 (177)
T 3mkq_B 131 EAAASAFLEQ 140 (177)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888888755
Done!