Your job contains 1 sequence.
>037250
MAQFQFQLATVKPHHSFSFMPIAPLSISHKPFNFLPKSSTIKCLSNSPKLNLPIKLRPLR
HPSLTLRSRLVCNMSGSDMISQLELDKPEERRKPKKSVNGVFWIILLNLGLYVADHVFQV
RSIKSLYLYHNFPAWYQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIF
TGAAANFVSWLILPKNAVSVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVVEKVM
EAAQASAGMSGTFIGGYSVQSINHIAHLSGALFGVFL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 037250
(277 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:504956416 - symbol:RBL11 "rhomboid-like protei... 948 2.6e-95 1
TAIR|locus:2179454 - symbol:AT5G25640 species:3702 "Arabi... 300 1.2e-26 1
UNIPROTKB|Q81VF8 - symbol:BAS0235 "Rhomboid family protei... 159 9.9e-14 2
TIGR_CMR|BA_0249 - symbol:BA_0249 "rhomboid family protei... 159 9.9e-14 2
TIGR_CMR|SPO_3011 - symbol:SPO_3011 "peptidase, S54 (rhom... 171 1.1e-11 1
UNIPROTKB|Q74EV8 - symbol:GSU0851 "Rhomboid-related membr... 140 1.4e-07 1
TIGR_CMR|GSU_0851 - symbol:GSU_0851 "rhomboid family prot... 140 1.4e-07 1
UNIPROTKB|Q97NE9 - symbol:SP_2094 "Putative uncharacteriz... 138 1.7e-07 1
UNIPROTKB|Q3ADW0 - symbol:CHY_0820 "Rhomboid family prote... 134 7.2e-07 1
TIGR_CMR|CHY_0820 - symbol:CHY_0820 "rhomboid family prot... 134 7.2e-07 1
UNIPROTKB|Q604D0 - symbol:MCA2616 "Rhomboid family protei... 132 1.7e-06 1
TAIR|locus:2195067 - symbol:RBL6 "RHOMBOID-like protein 6... 134 1.7e-06 1
UNIPROTKB|Q608I8 - symbol:MCA1502 "Rhomboid family protei... 128 3.9e-06 1
DICTYBASE|DDB_G0295849 - symbol:DDB_G0295849 "rhomboid fa... 133 5.3e-06 1
TAIR|locus:2182925 - symbol:RBL3 "RHOMBOID-like protein 3... 129 8.3e-06 1
DICTYBASE|DDB_G0292430 - symbol:DDB_G0292430 species:4468... 129 1.3e-05 1
UNIPROTKB|Q8EI50 - symbol:SO_1000 "Rhomboid protease" spe... 129 1.9e-05 2
TIGR_CMR|SO_1000 - symbol:SO_1000 "rhomboid family protei... 129 1.9e-05 2
UNIPROTKB|E2RQQ1 - symbol:PARL "Uncharacterized protein" ... 125 2.8e-05 1
UNIPROTKB|Q9H300 - symbol:PARL "Presenilins-associated rh... 125 2.8e-05 1
FB|FBgn0020248 - symbol:stet "stem cell tumor" species:72... 126 3.3e-05 1
TAIR|locus:2015193 - symbol:RBL2 "RHOMBOID-like 2" specie... 123 3.4e-05 1
UNIPROTKB|H7C122 - symbol:PARL "P-beta" species:9606 "Hom... 113 4.9e-05 1
UNIPROTKB|Q3ZA67 - symbol:DET0132 "Rhomboid family protei... 115 5.9e-05 1
TIGR_CMR|DET_0132 - symbol:DET_0132 "rhomboid family prot... 115 5.9e-05 1
MGI|MGI:1277152 - symbol:Parl "presenilin associated, rho... 122 6.1e-05 1
RGD|1306191 - symbol:Parl "presenilin associated, rhomboi... 121 7.9e-05 1
UNIPROTKB|Q3B8P0 - symbol:Parl "Presenilins-associated rh... 121 7.9e-05 1
FB|FBgn0004635 - symbol:rho "rhomboid" species:7227 "Dros... 120 9.3e-05 1
UNIPROTKB|Q2KHV4 - symbol:PARL "Presenilins-associated rh... 119 0.00013 1
WB|WBGene00004400 - symbol:rom-1 species:6239 "Caenorhabd... 118 0.00016 1
UNIPROTKB|G4N225 - symbol:MGG_07535 "Rhomboid family memb... 120 0.00019 1
TAIR|locus:2066102 - symbol:RBL1 "RHOMBOID-like 1" specie... 117 0.00024 1
FB|FBgn0003295 - symbol:ru "roughoid" species:7227 "Droso... 116 0.00025 1
TAIR|locus:2035190 - symbol:RBL5 "RHOMBOID-like protein 5... 114 0.00035 1
TAIR|locus:2027448 - symbol:RBL12 "RHOMBOID-like protein ... 94 0.00038 2
TAIR|locus:2084465 - symbol:RBL4 "RHOMBOID-like protein 4... 114 0.00054 1
ASPGD|ASPL0000061693 - symbol:AN1372 species:162425 "Emer... 116 0.00055 1
UNIPROTKB|I3LRY0 - symbol:RHBDL3 "Uncharacterized protein... 108 0.00087 1
>TAIR|locus:504956416 [details] [associations]
symbol:RBL11 "rhomboid-like protein 11" species:3702
"Arabidopsis thaliana" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009706 "chloroplast
inner membrane" evidence=IDA] [GO:0080140 "regulation of jasmonic
acid metabolic process" evidence=IMP] InterPro:IPR002610
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006508 GO:GO:0004252
PANTHER:PTHR22936 GO:GO:0009706 eggNOG:COG0705 EMBL:BT006426
EMBL:AK228048 IPI:IPI00537629 RefSeq:NP_680221.1 UniGene:At.44059
ProteinModelPortal:Q84MB5 STRING:Q84MB5 MEROPS:S54.025 PaxDb:Q84MB5
PRIDE:Q84MB5 EnsemblPlants:AT5G25752.1 GeneID:832642
KEGG:ath:AT5G25752 TAIR:At5g25752 HOGENOM:HOG000241269
InParanoid:Q84MB5 OMA:CHANWNH PhylomeDB:Q84MB5
ProtClustDB:CLSN2917838 Genevestigator:Q84MB5 GO:GO:0080140
Uniprot:Q84MB5
Length = 280
Score = 948 (338.8 bits), Expect = 2.6e-95, P = 2.6e-95
Identities = 179/246 (72%), Positives = 201/246 (81%)
Query: 32 FNFLPKSSTIKCLSNSPKLNLPIKLRPLRHPSLTLRSRLVCNMSGSDMISQLELDKPEER 91
F F P S + P++ RPL RS++ C S SD+ Q ELDK ++
Sbjct: 19 FRFPPLHRRRAASSPTNSTQPPLQFRPLT----VSRSQITCRFSQSDITPQFELDKAKDN 74
Query: 92 RKPKKSVNGVFWIILLNLGLYVADHVFQVRSIKSLYLYHNFPAWYQFVTAAFCHANWNHL 151
RKP+K NG+FWIIL+NLG+Y+ADH FQVR IKSLYLYHNFPAWYQFVTA FCHANWNHL
Sbjct: 75 RKPQKRANGIFWIILINLGIYLADHFFQVRGIKSLYLYHNFPAWYQFVTATFCHANWNHL 134
Query: 152 SSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWLILPKNAVSVGASGAVFGLFA 211
SSNLFFLYIFGKLVEEEEGNFGLWLSY+FTG AN VSWL+LP+NAVSVGASGAVFGLFA
Sbjct: 135 SSNLFFLYIFGKLVEEEEGNFGLWLSYLFTGVGANLVSWLVLPRNAVSVGASGAVFGLFA 194
Query: 212 ISVLVKMSWDWRKILEVLILGQFVVEKVMEAAQASAGMSGTFIGGYSVQSINHIAHLSGA 271
ISVLVKMSWDWRKILEVLILGQFV+E+VMEAAQASAG+SGT GGYS+Q++NHIAHLSGA
Sbjct: 195 ISVLVKMSWDWRKILEVLILGQFVIERVMEAAQASAGLSGTIYGGYSLQTVNHIAHLSGA 254
Query: 272 LFGVFL 277
L GV L
Sbjct: 255 LVGVVL 260
>TAIR|locus:2179454 [details] [associations]
symbol:AT5G25640 species:3702 "Arabidopsis thaliana"
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 EMBL:CP002688
GO:GO:0006508 GO:GO:0004252 IPI:IPI00517891 RefSeq:NP_197946.1
UniGene:At.55002 ProteinModelPortal:F4JY73 SMR:F4JY73
EnsemblPlants:AT5G25640.1 GeneID:832640 KEGG:ath:AT5G25640
OMA:IDSHRYL PhylomeDB:F4JY73 Uniprot:F4JY73
Length = 102
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 57/85 (67%), Positives = 69/85 (81%)
Query: 158 LYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWLILPKNAVSVGASGAVFGLFAISVLVK 217
L++ GK+VEEE+GNFGLWLSY+FTG AN VSW LP N+ GASGAVFGLF ISVLVK
Sbjct: 5 LWLTGKIVEEEKGNFGLWLSYLFTGVGANMVSWFTLPPNSFFSGASGAVFGLFVISVLVK 64
Query: 218 MSWDWRKILEVLILGQFVVEKVMEA 242
MS W K LEVLILGQFV+++ +++
Sbjct: 65 MSRGWSKFLEVLILGQFVMKRFIDS 89
>UNIPROTKB|Q81VF8 [details] [associations]
symbol:BAS0235 "Rhomboid family protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR002610
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 RefSeq:NP_842802.1
RefSeq:YP_016855.1 RefSeq:YP_026520.1 ProteinModelPortal:Q81VF8
DNASU:1085915 EnsemblBacteria:EBBACT00000011813
EnsemblBacteria:EBBACT00000014219 EnsemblBacteria:EBBACT00000019748
GeneID:1085915 GeneID:2818791 GeneID:2851802 KEGG:ban:BA_0249
KEGG:bar:GBAA_0249 KEGG:bat:BAS0235 HOGENOM:HOG000082474
OMA:MSSYLIM ProtClustDB:CLSK915750
BioCyc:BANT260799:GJAJ-257-MONOMER
BioCyc:BANT261594:GJ7F-265-MONOMER Uniprot:Q81VF8
Length = 190
Score = 159 (61.0 bits), Expect = 9.9e-14, Sum P(2) = 9.9e-14
Identities = 29/94 (30%), Positives = 49/94 (52%)
Query: 129 YHNFPA---WYQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAA 185
YH + A W++ +T+ F H + H SN L++ G +E++ G F + + +G
Sbjct: 38 YHEYIANGEWWRLITSLFVHVDLQHFLSNSICLFVLGSSIEKQLGRFSFIIIFFLSGILG 97
Query: 186 NFVSWLILPKNAVSVGASGAVFGLFAISVLVKMS 219
N S+LI+P + GASG +FGL + + S
Sbjct: 98 NIFSYLIMPHEYIHAGASGGIFGLLGAQLFLLYS 131
Score = 37 (18.1 bits), Expect = 9.9e-14, Sum P(2) = 9.9e-14
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 261 SINHIAHLSGALFG 274
S N I+HL+G + G
Sbjct: 160 SANPISHLTGLVIG 173
>TIGR_CMR|BA_0249 [details] [associations]
symbol:BA_0249 "rhomboid family protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 RefSeq:NP_842802.1
RefSeq:YP_016855.1 RefSeq:YP_026520.1 ProteinModelPortal:Q81VF8
DNASU:1085915 EnsemblBacteria:EBBACT00000011813
EnsemblBacteria:EBBACT00000014219 EnsemblBacteria:EBBACT00000019748
GeneID:1085915 GeneID:2818791 GeneID:2851802 KEGG:ban:BA_0249
KEGG:bar:GBAA_0249 KEGG:bat:BAS0235 HOGENOM:HOG000082474
OMA:MSSYLIM ProtClustDB:CLSK915750
BioCyc:BANT260799:GJAJ-257-MONOMER
BioCyc:BANT261594:GJ7F-265-MONOMER Uniprot:Q81VF8
Length = 190
Score = 159 (61.0 bits), Expect = 9.9e-14, Sum P(2) = 9.9e-14
Identities = 29/94 (30%), Positives = 49/94 (52%)
Query: 129 YHNFPA---WYQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAA 185
YH + A W++ +T+ F H + H SN L++ G +E++ G F + + +G
Sbjct: 38 YHEYIANGEWWRLITSLFVHVDLQHFLSNSICLFVLGSSIEKQLGRFSFIIIFFLSGILG 97
Query: 186 NFVSWLILPKNAVSVGASGAVFGLFAISVLVKMS 219
N S+LI+P + GASG +FGL + + S
Sbjct: 98 NIFSYLIMPHEYIHAGASGGIFGLLGAQLFLLYS 131
Score = 37 (18.1 bits), Expect = 9.9e-14, Sum P(2) = 9.9e-14
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 261 SINHIAHLSGALFG 274
S N I+HL+G + G
Sbjct: 160 SANPISHLTGLVIG 173
>TIGR_CMR|SPO_3011 [details] [associations]
symbol:SPO_3011 "peptidase, S54 (rhomboid) family"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004252 "serine-type
endopeptidase activity" evidence=ISS] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0006464 "cellular protein
modification process" evidence=ISS] InterPro:IPR002610
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006508 GO:GO:0004252
PANTHER:PTHR22936 HOGENOM:HOG000229238 RefSeq:YP_168215.1
ProteinModelPortal:Q5LP41 MEROPS:S54.027 GeneID:3195499
KEGG:sil:SPO3011 PATRIC:23379459 OMA:PFEILTF ProtClustDB:CLSK934025
Uniprot:Q5LP41
Length = 247
Score = 171 (65.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 46/148 (31%), Positives = 70/148 (47%)
Query: 135 WYQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWLILP 194
W VT+ F H W HL N+ FL+IFG +E+E G+ G L Y+ G A + L P
Sbjct: 61 WQTLVTSIFLHGGWMHLGGNMLFLWIFGDNLEDEMGHLGFALFYLAAGIGAGLIHVLSGP 120
Query: 195 KNAV-SVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVVEKVMEAAQASAGMSGTF 253
+ V ++GASGA+ G+ L+ IL +L + F + + A + F
Sbjct: 121 GSMVPTIGASGAIAGVMG-GYLLLFPRARVDILLILFV-YFRIFTIPAFVMLGAWLGFQF 178
Query: 254 IGGYSVQ----SINHIAHLSGALFGVFL 277
+GG+S + + AH G G+ L
Sbjct: 179 LGGFSSDPDTGGVAYWAHTGGFAVGLVL 206
>UNIPROTKB|Q74EV8 [details] [associations]
symbol:GSU0851 "Rhomboid-related membrane protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694
GO:GO:0016021 GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936
EMBL:AE017180 GenomeReviews:AE017180_GR HOGENOM:HOG000229238
MEROPS:S54.027 RefSeq:NP_951908.1 ProteinModelPortal:Q74EV8
GeneID:2687159 KEGG:gsu:GSU0851 PATRIC:22024463 OMA:IHDINPL
ProtClustDB:CLSK763108 BioCyc:GSUL243231:GH27-868-MONOMER
Uniprot:Q74EV8
Length = 241
Score = 140 (54.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 39/151 (25%), Positives = 71/151 (47%)
Query: 130 HNFPAWYQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVS 189
H A +T+ F H NW H+ SN+ +L+IFG VE+ G F + Y+ GA A
Sbjct: 72 HPLLALPTIITSMFLHGNWLHIGSNMLYLWIFGNNVEDVLGRFRFVVFYLGCGAVAALAQ 131
Query: 190 WLILPKNAVS-VGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVVEK---VMEAAQA 245
P + + VGASGAV G+ +L+ ++ ++ F+ ++
Sbjct: 132 VASAPGSDIPMVGASGAVAGVMGAYLLLFPHARILTLVPIIFFFTFIEVPAFIIIGWWVL 191
Query: 246 SAGMSGTFIGGYSVQS-INHIAHLSGALFGV 275
++ ++GG ++ + + AH+ G + G+
Sbjct: 192 IQFLNANWLGGGELRGGVAYFAHIGGFVAGI 222
>TIGR_CMR|GSU_0851 [details] [associations]
symbol:GSU_0851 "rhomboid family protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016021 "integral to membrane" evidence=ISS] InterPro:IPR002610
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000229238 MEROPS:S54.027
RefSeq:NP_951908.1 ProteinModelPortal:Q74EV8 GeneID:2687159
KEGG:gsu:GSU0851 PATRIC:22024463 OMA:IHDINPL ProtClustDB:CLSK763108
BioCyc:GSUL243231:GH27-868-MONOMER Uniprot:Q74EV8
Length = 241
Score = 140 (54.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 39/151 (25%), Positives = 71/151 (47%)
Query: 130 HNFPAWYQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVS 189
H A +T+ F H NW H+ SN+ +L+IFG VE+ G F + Y+ GA A
Sbjct: 72 HPLLALPTIITSMFLHGNWLHIGSNMLYLWIFGNNVEDVLGRFRFVVFYLGCGAVAALAQ 131
Query: 190 WLILPKNAVS-VGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVVEK---VMEAAQA 245
P + + VGASGAV G+ +L+ ++ ++ F+ ++
Sbjct: 132 VASAPGSDIPMVGASGAVAGVMGAYLLLFPHARILTLVPIIFFFTFIEVPAFIIIGWWVL 191
Query: 246 SAGMSGTFIGGYSVQS-INHIAHLSGALFGV 275
++ ++GG ++ + + AH+ G + G+
Sbjct: 192 IQFLNANWLGGGELRGGVAYFAHIGGFVAGI 222
>UNIPROTKB|Q97NE9 [details] [associations]
symbol:SP_2094 "Putative uncharacterized protein"
species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002610
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 EMBL:AE005672
GenomeReviews:AE005672_GR KO:K01362 PIR:H95244 RefSeq:NP_346513.1
ProteinModelPortal:Q97NE9 EnsemblBacteria:EBSTRT00000025202
GeneID:931960 KEGG:spn:SP_2094 PATRIC:19708775 HOGENOM:HOG000235153
OMA:GIMHIAS ProtClustDB:CLSK884194 Uniprot:Q97NE9
Length = 225
Score = 138 (53.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 48/181 (26%), Positives = 85/181 (46%)
Query: 101 VFWIILLNLG--LYVADHVFQVRSIKSLYLYHNFP--AWYQFVTAAFCHANWNHLSSNLF 156
VF ++L+ G AD +F+ ++ + FP W + ++A F H W H N+
Sbjct: 22 VFLLMLVTAGGNFDRADTLFRFGAMYGPAI-RLFPEQVW-RLLSAIFVHIGWEHFIVNML 79
Query: 157 FLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWLILPKNAVSVGASGAVFGLFAISVLV 216
LY G+ VEE G+ + Y+ +G N ++ PK+ ++ GAS +++GLFA +++
Sbjct: 80 SLYYLGRQVEEIFGSKQFFFLYLLSGMMGNLFVFVFSPKS-LAAGASTSLYGLFAAIIVL 138
Query: 217 KMSWDWRKILEVLILGQFVVEKVMEAAQASAGMSGTFIGGYSVQSINHIAHLSGALFGVF 276
+ + I + LGQ + + IG + I+ H+ GA+ G F
Sbjct: 139 RYATRNPYIQQ---LGQSYLTLFVV----------NIIGSVLIPGISLAGHIGGAVGGAF 185
Query: 277 L 277
L
Sbjct: 186 L 186
>UNIPROTKB|Q3ADW0 [details] [associations]
symbol:CHY_0820 "Rhomboid family protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694
GO:GO:0016021 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 eggNOG:COG0705 RefSeq:YP_359674.1
ProteinModelPortal:Q3ADW0 STRING:Q3ADW0 GeneID:3728101
KEGG:chy:CHY_0820 PATRIC:21274774 HOGENOM:HOG000229238 OMA:ARCAHND
BioCyc:CHYD246194:GJCN-820-MONOMER Uniprot:Q3ADW0
Length = 236
Score = 134 (52.2 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 44/145 (30%), Positives = 72/145 (49%)
Query: 140 TAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWLI-LPKNAV 198
T+ F H ++ HL SN++ L++FG VEE G+ L Y +G A ++ + V
Sbjct: 74 TSMFLHGSFIHLISNMWALWLFGDNVEERMGHLKFLLFYFLSGIVAMTAHYVFNFASDIV 133
Query: 199 SVGASGAVFGL----FAISVLVKMSWDWRKI-LEVLI-LGQFVVEKVMEAAQASAGMSGT 252
+VGASGA+ G+ F + L K+ + I + + I + F+ + +Q S G+ T
Sbjct: 134 AVGASGAIAGVMGAYFVLFPLAKIVTLFFLIFIPIFIDVPAFIYIGLWYISQLSNGIL-T 192
Query: 253 FIGGYSVQSINHIAHLSGALFGVFL 277
G I AH+ G LFG+ +
Sbjct: 193 LFGPVFGFGIAWWAHIGGFLFGILV 217
>TIGR_CMR|CHY_0820 [details] [associations]
symbol:CHY_0820 "rhomboid family protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006508 GO:GO:0004252
PANTHER:PTHR22936 eggNOG:COG0705 RefSeq:YP_359674.1
ProteinModelPortal:Q3ADW0 STRING:Q3ADW0 GeneID:3728101
KEGG:chy:CHY_0820 PATRIC:21274774 HOGENOM:HOG000229238 OMA:ARCAHND
BioCyc:CHYD246194:GJCN-820-MONOMER Uniprot:Q3ADW0
Length = 236
Score = 134 (52.2 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 44/145 (30%), Positives = 72/145 (49%)
Query: 140 TAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWLI-LPKNAV 198
T+ F H ++ HL SN++ L++FG VEE G+ L Y +G A ++ + V
Sbjct: 74 TSMFLHGSFIHLISNMWALWLFGDNVEERMGHLKFLLFYFLSGIVAMTAHYVFNFASDIV 133
Query: 199 SVGASGAVFGL----FAISVLVKMSWDWRKI-LEVLI-LGQFVVEKVMEAAQASAGMSGT 252
+VGASGA+ G+ F + L K+ + I + + I + F+ + +Q S G+ T
Sbjct: 134 AVGASGAIAGVMGAYFVLFPLAKIVTLFFLIFIPIFIDVPAFIYIGLWYISQLSNGIL-T 192
Query: 253 FIGGYSVQSINHIAHLSGALFGVFL 277
G I AH+ G LFG+ +
Sbjct: 193 LFGPVFGFGIAWWAHIGGFLFGILV 217
>UNIPROTKB|Q604D0 [details] [associations]
symbol:MCA2616 "Rhomboid family protein" species:243233
"Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694
GO:GO:0016021 GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936
EMBL:AE017282 GenomeReviews:AE017282_GR HOGENOM:HOG000229238
MEROPS:S54.027 RefSeq:YP_115020.1 ProteinModelPortal:Q604D0
GeneID:3104547 KEGG:mca:MCA2616 PATRIC:22609094 OMA:GGVMGAY
ProtClustDB:CLSK931543 Uniprot:Q604D0
Length = 253
Score = 132 (51.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 53/177 (29%), Positives = 77/177 (43%)
Query: 109 LGLYVADHVFQVRSIKSLYLYHNFPAWYQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEE 168
LGL V V + L + AW VT F H W H+ N++FL++FG VE+
Sbjct: 55 LGLAPVGTVIPVSPNFACQLEGDASAW-TLVTHMFLHGGWFHIIGNMWFLWVFGDNVEDA 113
Query: 169 EGNFGLWLSYIFTGAAANFVSWLILPKNAVS-VGASGAVFGLFAISVLVKMSWDWRKILE 227
G Y+ G AA P AV VGASGA+ G+ + ++ + +++
Sbjct: 114 MGPLRFVAFYVLCGLAAAAAQIASDPGAAVPMVGASGAIGGV--MGAYARL-YPRTQVIT 170
Query: 228 VLILGQFVVEKVMEAAQASAG-------MSGTFIGGYSVQSINHIAHLSGALFGVFL 277
++ LG F V A A G +SG G + + AH+ G L GV L
Sbjct: 171 LIFLG-FYWTTVAIPAFAMLGYWFFIQLISGLPALGSASGGVAFWAHVGGFLAGVLL 226
>TAIR|locus:2195067 [details] [associations]
symbol:RBL6 "RHOMBOID-like protein 6" species:3702
"Arabidopsis thaliana" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002610 InterPro:IPR022764
Pfam:PF01694 GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 eggNOG:COG0705
HOGENOM:HOG000239666 EMBL:AY065251 EMBL:AY091318 IPI:IPI00538843
RefSeq:NP_001077528.1 RefSeq:NP_001184975.1 RefSeq:NP_172735.1
UniGene:At.28545 ProteinModelPortal:Q8VZ48 IntAct:Q8VZ48
STRING:Q8VZ48 MEROPS:S54.A04 PaxDb:Q8VZ48 PRIDE:Q8VZ48
EnsemblPlants:AT1G12750.1 EnsemblPlants:AT1G12750.2
EnsemblPlants:AT1G12750.3 GeneID:837831 KEGG:ath:AT1G12750
TAIR:At1g12750 InParanoid:Q8VZ48 PhylomeDB:Q8VZ48
ProtClustDB:CLSN2682464 ArrayExpress:Q8VZ48 Genevestigator:Q8VZ48
Uniprot:Q8VZ48
Length = 307
Score = 134 (52.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 31/87 (35%), Positives = 53/87 (60%)
Query: 136 YQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWLILPK 195
++ +TA + HA HL N+F + IFG +E++ G + L Y+ +G + +S L L K
Sbjct: 98 WRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFLQK 157
Query: 196 NAVSVGASGAVFGLFAISVLVKMSWDW 222
+ +SVGASGA+ GL ++L ++ +W
Sbjct: 158 S-ISVGASGALLGLMG-AMLSELLTNW 182
>UNIPROTKB|Q608I8 [details] [associations]
symbol:MCA1502 "Rhomboid family protein" species:243233
"Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694
GO:GO:0016021 GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936
EMBL:AE017282 GenomeReviews:AE017282_GR HOGENOM:HOG000229238
RefSeq:YP_113959.1 ProteinModelPortal:Q608I8 GeneID:3102650
KEGG:mca:MCA1502 PATRIC:22606844 OMA:FASHAPY Uniprot:Q608I8
Length = 237
Score = 128 (50.1 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 138 FVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWLILPKNA 197
F+T+ F H +W HL N++ L+IFG +E+ G Y+ G A + P++
Sbjct: 72 FITSMFLHGSWFHLVGNMWLLWIFGDNIEDRMGGVRFLFFYLLCGVVAAGLQVYFNPQST 131
Query: 198 V-SVGASGAVFGL 209
V +VGASGA+ G+
Sbjct: 132 VPTVGASGAIAGV 144
>DICTYBASE|DDB_G0295849 [details] [associations]
symbol:DDB_G0295849 "rhomboid family protein"
species:44689 "Dictyostelium discoideum" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA;ISS]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0008236 "serine-type peptidase activity" evidence=ISS]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694
dictyBase:DDB_G0295849 GO:GO:0016021 GO:GO:0006508 GO:GO:0004252
GO:GO:0008236 PANTHER:PTHR22936 EMBL:AAFI02000044 MEROPS:S54.A16
RefSeq:XP_002649151.1 EnsemblProtists:DDB0266786 GeneID:8623398
KEGG:ddi:DDB_G0295849 Uniprot:C7G025
Length = 489
Score = 133 (51.9 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 40/142 (28%), Positives = 64/142 (45%)
Query: 135 WYQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWLILP 194
W++F T F H H N+ G +E G + Y+ G A N S ++LP
Sbjct: 293 WWRFFTPIFLHVGIFHYLMNMVTQLRVGMQLERAYGGHRIVPIYLLCGVAGNLCSAIMLP 352
Query: 195 KNAVSVGASGAVFGLFAISVLVKMSWDWRKILEV-LILGQFVVEKVMEAAQASAGMSGTF 253
N+V VGASGA+FG + +L + +W + + L G + + A G F
Sbjct: 353 -NSVQVGASGAIFGFLGV-LLTDLIRNWSVLAKPWLNFGSLLFSIITSFAV------GLF 404
Query: 254 IGGYSVQSINHIAHLSGALFGV 275
+ G +++ AHL G + G+
Sbjct: 405 LPG-----VDNFAHLGGFIAGI 421
>TAIR|locus:2182925 [details] [associations]
symbol:RBL3 "RHOMBOID-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006508
EMBL:AL163652 GO:GO:0004252 PANTHER:PTHR22936 UniGene:At.71052
HOGENOM:HOG000239666 EMBL:AY058157 EMBL:AY098983 IPI:IPI00536071
PIR:T48496 RefSeq:NP_196342.1 UniGene:At.48993
ProteinModelPortal:Q9LYP1 IntAct:Q9LYP1 MEROPS:S54.A02 PRIDE:Q9LYP1
EnsemblPlants:AT5G07250.1 GeneID:830616 KEGG:ath:AT5G07250
TAIR:At5g07250 InParanoid:Q9LYP1 OMA:KLGALEW PhylomeDB:Q9LYP1
ProtClustDB:CLSN2687058 Genevestigator:Q9LYP1 Uniprot:Q9LYP1
Length = 346
Score = 129 (50.5 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 34/105 (32%), Positives = 60/105 (57%)
Query: 136 YQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWLILPK 195
++ +T + HA HL +N+ L G +E++ G + + Y+ +G + +S L + +
Sbjct: 135 WRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFVRIGVIYLLSGIGGSVLSSLFI-R 193
Query: 196 NAVSVGASGAVFGLFAISVLVKMSWDW----RKILEVLILGQFVV 236
N++SVGASGA+FGL S+L ++ +W KI +L L FV+
Sbjct: 194 NSISVGASGALFGLLG-SMLSELFTNWTIYSNKIAALLTL-LFVI 236
>DICTYBASE|DDB_G0292430 [details] [associations]
symbol:DDB_G0292430 species:44689 "Dictyostelium
discoideum" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] InterPro:IPR002610
InterPro:IPR022764 Pfam:PF01694 dictyBase:DDB_G0292430
GO:GO:0016021 GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936
EMBL:AAFI02000190 KO:K09650 RefSeq:XP_629608.1
ProteinModelPortal:Q54D88 EnsemblProtists:DDB0184385 GeneID:8628670
KEGG:ddi:DDB_G0292430 eggNOG:NOG259765 InParanoid:Q54D88
OMA:STFTHTE Uniprot:Q54D88
Length = 440
Score = 129 (50.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 45/153 (29%), Positives = 71/153 (46%)
Query: 130 HNFPAWYQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVS 189
+ +P+ + + F H H+ N++ L FG + G + Y G + S
Sbjct: 215 NKYPS--SLILSTFTHTEGLHILFNMYALASFGSTAYDHLGTRDFLILYFLGGLFGSMTS 272
Query: 190 W---LILPKNAV-SVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVVEKVMEAAQA 245
L++ V S+GASG+VF LFA SVL + S R + L + F +V+ AA A
Sbjct: 273 LTYKLLVGSYVVPSIGASGSVFSLFASSVLFENS---RVSIIFLPMFDFEGSQVL-AALA 328
Query: 246 SAGMSGTFIGGYSVQS-INHIAHLSGALFGVFL 277
G F+ +S +S ++H HL L G F+
Sbjct: 329 LFDFCGLFLPLFSRRSPLDHACHLGSTLVGAFV 361
>UNIPROTKB|Q8EI50 [details] [associations]
symbol:SO_1000 "Rhomboid protease" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 EMBL:AE014299
GenomeReviews:AE014299_GR RefSeq:NP_716628.1
ProteinModelPortal:Q8EI50 GeneID:1168841 KEGG:son:SO_1000
PATRIC:23521647 HOGENOM:HOG000296107 OMA:FEARNGH
ProtClustDB:CLSK906046 Uniprot:Q8EI50
Length = 528
Score = 129 (50.5 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 42/145 (28%), Positives = 69/145 (47%)
Query: 136 YQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANF--VSWLIL 193
++ ++ F H HL NL+ L+ G +E G + L Y+ +G AA+ +SW
Sbjct: 383 WRLISNVFLHGGLMHLIFNLYGLFFAGIFLEPLLGKWRLLGVYLMSGLAASIASISWY-- 440
Query: 194 PKNAVSVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVVEKVMEAAQASAGMSGTF 253
+ +S+GASGA+ GLF + ++ W W + L L ++ + SA +
Sbjct: 441 -EATISIGASGAIMGLFGVLIM----WIW---MGSLPLATHMLLALHLTLFVSASLVMGL 492
Query: 254 IGGYSVQSINHIAHL-SGALFGVFL 277
+GG V + H+ L SG L G L
Sbjct: 493 LGG--VDNAAHLGGLGSGLLLGCVL 515
Score = 39 (18.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 2 AQFQFQLATVKPHHSFSFMPIAPLS 26
A+F LA KP F PI LS
Sbjct: 319 AEFYAFLAEFKPRVGFVITPILLLS 343
>TIGR_CMR|SO_1000 [details] [associations]
symbol:SO_1000 "rhomboid family protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 EMBL:AE014299
GenomeReviews:AE014299_GR RefSeq:NP_716628.1
ProteinModelPortal:Q8EI50 GeneID:1168841 KEGG:son:SO_1000
PATRIC:23521647 HOGENOM:HOG000296107 OMA:FEARNGH
ProtClustDB:CLSK906046 Uniprot:Q8EI50
Length = 528
Score = 129 (50.5 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 42/145 (28%), Positives = 69/145 (47%)
Query: 136 YQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANF--VSWLIL 193
++ ++ F H HL NL+ L+ G +E G + L Y+ +G AA+ +SW
Sbjct: 383 WRLISNVFLHGGLMHLIFNLYGLFFAGIFLEPLLGKWRLLGVYLMSGLAASIASISWY-- 440
Query: 194 PKNAVSVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVVEKVMEAAQASAGMSGTF 253
+ +S+GASGA+ GLF + ++ W W + L L ++ + SA +
Sbjct: 441 -EATISIGASGAIMGLFGVLIM----WIW---MGSLPLATHMLLALHLTLFVSASLVMGL 492
Query: 254 IGGYSVQSINHIAHL-SGALFGVFL 277
+GG V + H+ L SG L G L
Sbjct: 493 LGG--VDNAAHLGGLGSGLLLGCVL 515
Score = 39 (18.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 2 AQFQFQLATVKPHHSFSFMPIAPLS 26
A+F LA KP F PI LS
Sbjct: 319 AEFYAFLAEFKPRVGFVITPILLLS 343
>UNIPROTKB|E2RQQ1 [details] [associations]
symbol:PARL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001243 "negative regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0090201 "negative
regulation of release of cytochrome c from mitochondria"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] InterPro:IPR002610
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0005743
GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 GO:GO:0090201
GO:GO:2001243 CTD:55486 GeneTree:ENSGT00390000013063 KO:K09650
OMA:SPYPIRS EMBL:AAEX03017269 RefSeq:XP_545224.2
ProteinModelPortal:E2RQQ1 Ensembl:ENSCAFT00000019032 GeneID:488100
KEGG:cfa:488100 NextBio:20861529 Uniprot:E2RQQ1
Length = 379
Score = 125 (49.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 41/141 (29%), Positives = 70/141 (49%)
Query: 141 AAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWLI---LPKNA 197
+ F H + H+++N++ L+ F + G Y+ G +NFVS++ +
Sbjct: 212 STFSHFSLFHMAANMYVLWSFSSSIVNILGQEQFMAVYLSAGVISNFVSYVCKVATGRYG 271
Query: 198 VSVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVVEKVMEA--AQASAGMSGTFIG 255
S+GASGA+ + A +V K+ + R + L + F ++A A +AGM I
Sbjct: 272 PSLGASGAIMTVLA-AVCTKIP-EGRLAIIFLPMFTFTAGNALKAIIAMDTAGM----IL 325
Query: 256 GYSVQSINHIAHLSGALFGVF 276
G+ +H AHL GALFG++
Sbjct: 326 GWKF--FDHAAHLGGALFGIW 344
>UNIPROTKB|Q9H300 [details] [associations]
symbol:PARL "Presenilins-associated rhomboid-like protein,
mitochondrial" species:9606 "Homo sapiens" [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0090201 "negative regulation of release of cytochrome c from
mitochondria" evidence=IEA] [GO:2001243 "negative regulation of
intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
GO:GO:0005739 GO:GO:0005634 GO:GO:0005743 GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 GO:GO:0090201 GO:GO:2001243
eggNOG:COG0705 CTD:55486 HOGENOM:HOG000230670 HOVERGEN:HBG082107
KO:K09650 OMA:SPYPIRS OrthoDB:EOG4ZGPCC EMBL:AF197937 EMBL:BC003653
EMBL:BC014058 EMBL:AF116692 IPI:IPI00060545 IPI:IPI00186189
RefSeq:NP_001032728.1 RefSeq:NP_061092.3 UniGene:Hs.478469
ProteinModelPortal:Q9H300 STRING:Q9H300 MEROPS:S54.009
PhosphoSite:Q9H300 DMDM:143811433 PaxDb:Q9H300 PRIDE:Q9H300
DNASU:55486 Ensembl:ENST00000311101 Ensembl:ENST00000317096
GeneID:55486 KEGG:hsa:55486 UCSC:uc003fmd.3 UCSC:uc003fme.3
GeneCards:GC03M183547 HGNC:HGNC:18253 HPA:HPA019545 MIM:607858
neXtProt:NX_Q9H300 PharmGKB:PA134939789 InParanoid:Q9H300
PhylomeDB:Q9H300 GenomeRNAi:55486 NextBio:59867 PMAP-CutDB:Q9H300
ArrayExpress:Q9H300 Bgee:Q9H300 CleanEx:HS_PARL
Genevestigator:Q9H300 GermOnline:ENSG00000175193 Uniprot:Q9H300
Length = 379
Score = 125 (49.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 41/141 (29%), Positives = 70/141 (49%)
Query: 141 AAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWL---ILPKNA 197
+ F H + H+++N++ L+ F + G Y+ G +NFVS++ +
Sbjct: 212 STFSHFSLFHMAANMYVLWSFSSSIVNILGQEQFMAVYLSAGVISNFVSYVGKVATGRYG 271
Query: 198 VSVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVVEKVMEA--AQASAGMSGTFIG 255
S+GASGA+ + A +V K+ + R + L + F ++A A +AGM I
Sbjct: 272 PSLGASGAIMTVLA-AVCTKIP-EGRLAIIFLPMFTFTAGNALKAIIAMDTAGM----IL 325
Query: 256 GYSVQSINHIAHLSGALFGVF 276
G+ +H AHL GALFG++
Sbjct: 326 GWKF--FDHAAHLGGALFGIW 344
>FB|FBgn0020248 [details] [associations]
symbol:stet "stem cell tumor" species:7227 "Drosophila
melanogaster" [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=NAS] [GO:0005886 "plasma membrane"
evidence=NAS] [GO:0008236 "serine-type peptidase activity"
evidence=NAS] [GO:0016021 "integral to membrane" evidence=IEA;NAS]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR002048 InterPro:IPR002610
InterPro:IPR011992 InterPro:IPR017213 InterPro:IPR022764
Pfam:PF01694 PIRSF:PIRSF037470 PROSITE:PS50222 GO:GO:0016021
EMBL:AE014296 GO:GO:0006508 GO:GO:0005509 Gene3D:1.10.238.10
GO:GO:0004252 PANTHER:PTHR22936 KO:K02857
GeneTree:ENSGT00390000005726 MEROPS:S54.010 FlyBase:FBgn0020248
RefSeq:NP_788450.1 UniGene:Dm.3465 ProteinModelPortal:Q9W0E9
SMR:Q9W0E9 MINT:MINT-939259 STRING:Q9W0E9
EnsemblMetazoa:FBtr0072712 GeneID:38169 KEGG:dme:Dmel_CG33166
UCSC:CG33166-RB CTD:38169 InParanoid:Q9W0E9 OMA:GWLHLGF
PhylomeDB:Q9W0E9 GenomeRNAi:38169 NextBio:807311
ArrayExpress:Q9W0E9 Bgee:Q9W0E9 Uniprot:Q9W0E9
Length = 485
Score = 126 (49.4 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 45/167 (26%), Positives = 77/167 (46%)
Query: 125 SLYLYH---NFPAWYQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFT 181
S+++Y W +F+ HA W HL N+ +FG +E G+ + Y F+
Sbjct: 256 SMFIYRPDKRHEIW-RFLFYMVLHAGWLHLGFNVAVQLVFGLPLEMVHGSTRIACIY-FS 313
Query: 182 GAAANFVSWLILPKNAVSVGASGAVFGLFAI---SVLV---KMSWDWRKILEVLILGQFV 235
G A + I + VGASG V+ L A +VL+ +M + K+L +L+ F
Sbjct: 314 GVLAGSLGTSIFDPDVFLVGASGGVYALLAAHLANVLLNYHQMRYGVIKLLHILVFVSFD 373
Query: 236 VEKVMEAAQAS----AGMSGTFIG---GYSVQSINHIAHLSGALFGV 275
+ A A G S F+ + +++++AHL+GA+ G+
Sbjct: 374 FGFAIYARYAGDELQLGSSSEFLAIDQAETAGAVSYVAHLAGAIAGL 420
>TAIR|locus:2015193 [details] [associations]
symbol:RBL2 "RHOMBOID-like 2" species:3702 "Arabidopsis
thaliana" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005794
GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 EMBL:AC010795
HOGENOM:HOG000239666 EMBL:BT004076 EMBL:BT005121 EMBL:AB195671
IPI:IPI00521870 PIR:F96656 RefSeq:NP_176500.1 UniGene:At.43734
ProteinModelPortal:Q9CAN1 IntAct:Q9CAN1 MEROPS:S54.015 PaxDb:Q9CAN1
PRIDE:Q9CAN1 EnsemblPlants:AT1G63120.1 GeneID:842616
KEGG:ath:AT1G63120 TAIR:At1g63120 eggNOG:KOG2289 InParanoid:Q9CAN1
OMA:ETHWTSW PhylomeDB:Q9CAN1 ProtClustDB:CLSN2914175
ArrayExpress:Q9CAN1 Genevestigator:Q9CAN1 Uniprot:Q9CAN1
Length = 317
Score = 123 (48.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 29/93 (31%), Positives = 52/93 (55%)
Query: 130 HNFPAWYQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVS 189
H W + ++ + HA HL +N+ L G +E++ G + L Y+ +G + +S
Sbjct: 106 HEHQGW-RLLSCMWLHAGIIHLLTNMLSLIFIGIRLEQQFGFIRVGLIYLISGLGGSILS 164
Query: 190 WLILPKNAVSVGASGAVFGLFAISVLVKMSWDW 222
L L + ++SVGASGA+FGL ++L ++ +W
Sbjct: 165 SLFL-QESISVGASGALFGLLG-AMLSELLTNW 195
>UNIPROTKB|H7C122 [details] [associations]
symbol:PARL "P-beta" species:9606 "Homo sapiens"
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002610 InterPro:IPR022764
Pfam:PF01694 GO:GO:0016021 EMBL:AC068644 GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 HGNC:HGNC:18253 EMBL:AC131160
ProteinModelPortal:H7C122 Ensembl:ENST00000417784 Uniprot:H7C122
Length = 171
Score = 113 (44.8 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 40/133 (30%), Positives = 65/133 (48%)
Query: 149 NHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWL---ILPKNAVSVGASGA 205
N S+N++ L+ F + G Y+ G +NFVS++ + S+GASGA
Sbjct: 12 NPASTNMYVLWSFSSSIVNILGQEQFMAVYLSAGVISNFVSYVGKVATGRYGPSLGASGA 71
Query: 206 VFGLFAISVLVKMSWDWRKILEVLILGQFVVEKVMEA--AQASAGMSGTFIGGYSVQSIN 263
+ + A +V K+ + R + L + F ++A A +AGM I G+ +
Sbjct: 72 IMTVLA-AVCTKIP-EGRLAIIFLPMFTFTAGNALKAIIAMDTAGM----ILGWKF--FD 123
Query: 264 HIAHLSGALFGVF 276
H AHL GALFG++
Sbjct: 124 HAAHLGGALFGIW 136
>UNIPROTKB|Q3ZA67 [details] [associations]
symbol:DET0132 "Rhomboid family protein" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0705 HOGENOM:HOG000229238
RefSeq:YP_180882.1 ProteinModelPortal:Q3ZA67 STRING:Q3ZA67
GeneID:3230502 KEGG:det:DET0132 PATRIC:21607353 OMA:HANITHL
ProtClustDB:CLSK837606 BioCyc:DETH243164:GJNF-132-MONOMER
Uniprot:Q3ZA67
Length = 190
Score = 115 (45.5 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 40/137 (29%), Positives = 64/137 (46%)
Query: 136 YQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWLILPK 195
+ +T+ F HAN HL +N+ LY FG + + WL F G A + +++L
Sbjct: 49 WTILTSLFVHANLWHLFANMLTLYFFGNALLQMVSQRS-WLIIFFGGGLAGSLLFILLNA 107
Query: 196 NAVS--VGASGAVFGLF-AISVL---VKMSWDWRKI---LEVLILGQFVVEKVMEAAQAS 246
+ +GASGAVF L A++VL K+ I L + +LG F + + +
Sbjct: 108 GSYGYVIGASGAVFALGGALAVLRPNSKVMVFPLPIPIPLWIAVLGSFAILSFLPSVAWQ 167
Query: 247 AGMSGTFIG---GYSVQ 260
+ G +G GY +Q
Sbjct: 168 GHLGGLLVGLACGYLIQ 184
>TIGR_CMR|DET_0132 [details] [associations]
symbol:DET_0132 "rhomboid family protein" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=ISS] InterPro:IPR002610
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0705 HOGENOM:HOG000229238
RefSeq:YP_180882.1 ProteinModelPortal:Q3ZA67 STRING:Q3ZA67
GeneID:3230502 KEGG:det:DET0132 PATRIC:21607353 OMA:HANITHL
ProtClustDB:CLSK837606 BioCyc:DETH243164:GJNF-132-MONOMER
Uniprot:Q3ZA67
Length = 190
Score = 115 (45.5 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 40/137 (29%), Positives = 64/137 (46%)
Query: 136 YQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWLILPK 195
+ +T+ F HAN HL +N+ LY FG + + WL F G A + +++L
Sbjct: 49 WTILTSLFVHANLWHLFANMLTLYFFGNALLQMVSQRS-WLIIFFGGGLAGSLLFILLNA 107
Query: 196 NAVS--VGASGAVFGLF-AISVL---VKMSWDWRKI---LEVLILGQFVVEKVMEAAQAS 246
+ +GASGAVF L A++VL K+ I L + +LG F + + +
Sbjct: 108 GSYGYVIGASGAVFALGGALAVLRPNSKVMVFPLPIPIPLWIAVLGSFAILSFLPSVAWQ 167
Query: 247 AGMSGTFIG---GYSVQ 260
+ G +G GY +Q
Sbjct: 168 GHLGGLLVGLACGYLIQ 184
>MGI|MGI:1277152 [details] [associations]
symbol:Parl "presenilin associated, rhomboid-like"
species:10090 "Mus musculus" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=IMP] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008236 "serine-type peptidase activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0090201 "negative regulation of release
of cytochrome c from mitochondria" evidence=IMP] [GO:2001243
"negative regulation of intrinsic apoptotic signaling pathway"
evidence=IMP] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694
MGI:MGI:1277152 GO:GO:0016021 GO:GO:0005634 GO:GO:0005743
GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 GO:GO:0090201
GO:GO:2001243 eggNOG:COG0705 CTD:55486 GeneTree:ENSGT00390000013063
HOGENOM:HOG000230670 HOVERGEN:HBG082107 KO:K09650 OMA:SPYPIRS
OrthoDB:EOG4ZGPCC EMBL:AK151652 EMBL:BC083153 IPI:IPI00124015
RefSeq:NP_001005767.1 UniGene:Mm.371737 ProteinModelPortal:Q5XJY4
DIP:DIP-59825N IntAct:Q5XJY4 STRING:Q5XJY4 PhosphoSite:Q5XJY4
PaxDb:Q5XJY4 PRIDE:Q5XJY4 Ensembl:ENSMUST00000048642 GeneID:381038
KEGG:mmu:381038 UCSC:uc007ypm.1 InParanoid:Q5XJY4 NextBio:401496
Bgee:Q5XJY4 CleanEx:MM_PARL Genevestigator:Q5XJY4
GermOnline:ENSMUSG00000033918 Uniprot:Q5XJY4
Length = 377
Score = 122 (48.0 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 41/141 (29%), Positives = 70/141 (49%)
Query: 141 AAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWLI---LPKNA 197
+ F H + H+++N++ L+ F + G Y+ G +NFVS++ +
Sbjct: 210 STFSHFSLFHMAANMYVLWSFSSSIVNILGQEQFVAVYLSAGVISNFVSYVCKVATGRYG 269
Query: 198 VSVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVVEKVMEA--AQASAGMSGTFIG 255
S+GASGA+ + A +V K+ + R + L + F ++A A +AGM I
Sbjct: 270 PSLGASGAIMTVLA-AVCTKIP-EGRLAIIFLPVFTFTAGNALKAIIAMDTAGM----IL 323
Query: 256 GYSVQSINHIAHLSGALFGVF 276
G+ +H AHL GALFG++
Sbjct: 324 GWKF--FDHAAHLGGALFGIW 342
>RGD|1306191 [details] [associations]
symbol:Parl "presenilin associated, rhomboid-like" species:10116
"Rattus norvegicus" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005743
"mitochondrial inner membrane" evidence=IEA;ISO] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0090201 "negative regulation of release of
cytochrome c from mitochondria" evidence=ISO] [GO:2001243 "negative
regulation of intrinsic apoptotic signaling pathway" evidence=ISO]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 RGD:1306191
GO:GO:0016021 GO:GO:0005634 GO:GO:0005743 GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 GO:GO:0090201 GO:GO:2001243
eggNOG:COG0705 CTD:55486 HOGENOM:HOG000230670 HOVERGEN:HBG082107
KO:K09650 OrthoDB:EOG4ZGPCC EMBL:BC088226 EMBL:BC105907
IPI:IPI00361872 IPI:IPI00781173 RefSeq:NP_001030326.1
UniGene:Rn.7053 ProteinModelPortal:Q3B8P0 STRING:Q3B8P0
PhosphoSite:Q3B8P0 PRIDE:Q3B8P0 GeneID:287979 KEGG:rno:287979
InParanoid:Q3B8P0 NextBio:627335 ArrayExpress:Q3B8P0
Genevestigator:Q3B8P0 GermOnline:ENSRNOG00000023271 Uniprot:Q3B8P0
Length = 377
Score = 121 (47.7 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 41/141 (29%), Positives = 70/141 (49%)
Query: 141 AAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWLI---LPKNA 197
+ F H + H+++N++ L+ F + G Y+ G +NFVS++ +
Sbjct: 210 STFSHFSLFHMAANMYVLWSFSTSIVNILGQEQFVAVYLSAGVISNFVSYVCKVATGRYG 269
Query: 198 VSVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVVEKVMEA--AQASAGMSGTFIG 255
S+GASGA+ + A +V K+ + R + L + F ++A A +AGM I
Sbjct: 270 PSLGASGAIMTVLA-AVCTKIP-EGRLAIIFLPVFTFTAGNALKAIIAMDTAGM----IL 323
Query: 256 GYSVQSINHIAHLSGALFGVF 276
G+ +H AHL GALFG++
Sbjct: 324 GWKF--FDHAAHLGGALFGIW 342
>UNIPROTKB|Q3B8P0 [details] [associations]
symbol:Parl "Presenilins-associated rhomboid-like protein,
mitochondrial" species:10116 "Rattus norvegicus" [GO:0004252
"serine-type endopeptidase activity" evidence=IEA]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 RGD:1306191
GO:GO:0016021 GO:GO:0005634 GO:GO:0005743 GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 GO:GO:0090201 GO:GO:2001243
eggNOG:COG0705 CTD:55486 HOGENOM:HOG000230670 HOVERGEN:HBG082107
KO:K09650 OrthoDB:EOG4ZGPCC EMBL:BC088226 EMBL:BC105907
IPI:IPI00361872 IPI:IPI00781173 RefSeq:NP_001030326.1
UniGene:Rn.7053 ProteinModelPortal:Q3B8P0 STRING:Q3B8P0
PhosphoSite:Q3B8P0 PRIDE:Q3B8P0 GeneID:287979 KEGG:rno:287979
InParanoid:Q3B8P0 NextBio:627335 ArrayExpress:Q3B8P0
Genevestigator:Q3B8P0 GermOnline:ENSRNOG00000023271 Uniprot:Q3B8P0
Length = 377
Score = 121 (47.7 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 41/141 (29%), Positives = 70/141 (49%)
Query: 141 AAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWLI---LPKNA 197
+ F H + H+++N++ L+ F + G Y+ G +NFVS++ +
Sbjct: 210 STFSHFSLFHMAANMYVLWSFSTSIVNILGQEQFVAVYLSAGVISNFVSYVCKVATGRYG 269
Query: 198 VSVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVVEKVMEA--AQASAGMSGTFIG 255
S+GASGA+ + A +V K+ + R + L + F ++A A +AGM I
Sbjct: 270 PSLGASGAIMTVLA-AVCTKIP-EGRLAIIFLPVFTFTAGNALKAIIAMDTAGM----IL 323
Query: 256 GYSVQSINHIAHLSGALFGVF 276
G+ +H AHL GALFG++
Sbjct: 324 GWKF--FDHAAHLGGALFGIW 342
>FB|FBgn0004635 [details] [associations]
symbol:rho "rhomboid" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=ISS;IDA] [GO:0007474
"imaginal disc-derived wing vein specification"
evidence=NAS;IMP;TAS] [GO:0007422 "peripheral nervous system
development" evidence=TAS] [GO:0016021 "integral to membrane"
evidence=IEA;ISM;TAS] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0061331 "epithelial cell
proliferation involved in Malpighian tubule morphogenesis"
evidence=IMP] [GO:0045742 "positive regulation of epidermal growth
factor receptor signaling pathway" evidence=TAS] [GO:0005887
"integral to plasma membrane" evidence=NAS] [GO:0046845 "branched
duct epithelial cell fate determination, open tracheal system"
evidence=TAS] [GO:0030707 "ovarian follicle cell development"
evidence=TAS] [GO:0010629 "negative regulation of gene expression"
evidence=IMP] [GO:0007424 "open tracheal system development"
evidence=TAS] [GO:0001763 "morphogenesis of a branching structure"
evidence=NAS] [GO:0007432 "salivary gland boundary specification"
evidence=NAS] [GO:0038005 "peptide bond cleavage involved in
epidermal growth factor receptor ligand maturation" evidence=IGI]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0004252 "serine-type
endopeptidase activity" evidence=ISM;IGI;IMP;IDA] [GO:0007438
"oenocyte development" evidence=IGI;IMP] [GO:0007479 "leg disc
proximal/distal pattern formation" evidence=TAS] [GO:0007420 "brain
development" evidence=IMP] [GO:0007431 "salivary gland development"
evidence=TAS] [GO:0007611 "learning or memory" evidence=IMP]
[GO:0008355 "olfactory learning" evidence=IMP] [GO:0035202
"tracheal pit formation in open tracheal system" evidence=TAS]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008586 "imaginal disc-derived wing vein
morphogenesis" evidence=IMP] [GO:0035225 "determination of genital
disc primordium" evidence=IMP] [GO:0035311 "wing cell fate
specification" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0035160 "maintenance of epithelial integrity,
open tracheal system" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0048149 "behavioral response to
ethanol" evidence=IMP] [GO:0048865 "stem cell fate commitment"
evidence=IMP] [GO:0045177 "apical part of cell" evidence=IDA]
InterPro:IPR002610 InterPro:IPR017213 InterPro:IPR022764
Pfam:PF01694 PIRSF:PIRSF037470 GO:GO:0016021 GO:GO:0005886
GO:GO:0005794 GO:GO:0007173 GO:GO:0008355 GO:GO:0007420
EMBL:AE014296 GO:GO:0000139 GO:GO:0008586 GO:GO:0007474
GO:GO:0030707 GO:GO:0061331 GO:GO:0006508 GO:GO:0045177
GO:GO:0007422 GO:GO:0004252 PANTHER:PTHR22936 GO:GO:0035225
GO:GO:0007438 GO:GO:0000910 GO:GO:0048149 GO:GO:0007409
GO:GO:0016337 GO:GO:0010629 GO:GO:0007479 GO:GO:0007432
GO:GO:0035160 GO:GO:0001763 GO:GO:0046845 GO:GO:0048865
GO:GO:0035202 CTD:6010 ChiTaRS:RHO eggNOG:NOG300180 KO:K02857
GeneTree:ENSGT00390000005726 EMBL:X52454 PIR:A34597
RefSeq:NP_523883.2 UniGene:Dm.808 ProteinModelPortal:P20350
MINT:MINT-4508920 STRING:P20350 MEROPS:S54.001 PRIDE:P20350
EnsemblMetazoa:FBtr0072694 EnsemblMetazoa:FBtr0333207 GeneID:38168
KEGG:dme:Dmel_CG1004 FlyBase:FBgn0004635 InParanoid:P20350
OMA:MHGTARI OrthoDB:EOG4X3FGZ PhylomeDB:P20350 GenomeRNAi:38168
NextBio:807306 Bgee:P20350 GermOnline:CG1004 GO:GO:0038005
GO:GO:0035311 Uniprot:P20350
Length = 355
Score = 120 (47.3 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 40/144 (27%), Positives = 66/144 (45%)
Query: 136 YQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWLILPK 195
++F + F HANW HL N+ FG +E G + + Y+ G A + ++
Sbjct: 151 WRFFSYMFLHANWFHLGFNIVIQLFFGIPLEVMHGTARIGVIYM-AGVFAGSLGTSVVDS 209
Query: 196 NAVSVGASGAVFGLFAISVL-VKMSWDWRKILEVLILGQFVVEKVMEAAQA--SAGMSGT 252
VGASG V+ L A + + +++ K LG V+ + A + G+
Sbjct: 210 EVFLVGASGGVYALLAAHLANITLNYAHMKSASTQ-LGSVVIFVSCDLGYALYTQYFDGS 268
Query: 253 -FIGGYSVQSINHIAHLSGALFGV 275
F G +++IAHL+GAL G+
Sbjct: 269 AFAKG---PQVSYIAHLTGALAGL 289
>UNIPROTKB|Q2KHV4 [details] [associations]
symbol:PARL "Presenilins-associated rhomboid-like protein,
mitochondrial" species:9913 "Bos taurus" [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:2001243 "negative regulation of intrinsic apoptotic signaling
pathway" evidence=IEA] [GO:0090201 "negative regulation of release
of cytochrome c from mitochondria" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694
GO:GO:0016021 GO:GO:0005634 GO:GO:0005743 GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 GO:GO:0090201 GO:GO:2001243
eggNOG:COG0705 EMBL:BT020676 EMBL:BT026291 EMBL:BT029889
EMBL:BC112869 IPI:IPI00707810 RefSeq:NP_001015596.1 UniGene:Bt.4331
ProteinModelPortal:Q2KHV4 STRING:Q2KHV4 PRIDE:Q2KHV4
Ensembl:ENSBTAT00000019227 GeneID:514191 KEGG:bta:514191 CTD:55486
GeneTree:ENSGT00390000013063 HOGENOM:HOG000230670
HOVERGEN:HBG082107 InParanoid:Q2KHV4 KO:K09650 OMA:SPYPIRS
OrthoDB:EOG4ZGPCC NextBio:20871217 Uniprot:Q2KHV4
Length = 377
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 40/141 (28%), Positives = 69/141 (48%)
Query: 141 AAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWLI---LPKNA 197
+ F H + H+++N++ L+ F + G Y+ G + FVS++ +
Sbjct: 210 STFSHFSLFHMAANMYVLWSFSSSIVNILGQEQFMAVYLSAGVISTFVSYVCKVATGRYG 269
Query: 198 VSVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVVEKVMEA--AQASAGMSGTFIG 255
S+GASGA+ + A +V K+ + R + L + F ++A A +AGM I
Sbjct: 270 PSLGASGAIMTVLA-AVCTKIP-EGRLAIIFLPMFTFTAGNALKAIIAMDTAGM----IL 323
Query: 256 GYSVQSINHIAHLSGALFGVF 276
G+ +H AHL GALFG++
Sbjct: 324 GWKF--FDHAAHLGGALFGIW 342
>WB|WBGene00004400 [details] [associations]
symbol:rom-1 species:6239 "Caenorhabditis elegans"
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR002610 InterPro:IPR017213
InterPro:IPR022764 Pfam:PF01694 PIRSF:PIRSF037470 GO:GO:0016021
GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936 GO:GO:0040027
eggNOG:NOG300180 KO:K02857 GeneTree:ENSGT00390000005726
EMBL:FO080682 PIR:T16172 RefSeq:NP_498029.2 UniGene:Cel.25302
ProteinModelPortal:Q19821 SMR:Q19821 MEROPS:S54.013 PaxDb:Q19821
EnsemblMetazoa:F26F4.3 GeneID:184989 KEGG:cel:CELE_F26F4.3
UCSC:F26F4.3 CTD:184989 WormBase:F26F4.3 HOGENOM:HOG000021410
InParanoid:Q19821 OMA:SHLAHIA NextBio:926670 Uniprot:Q19821
Length = 356
Score = 118 (46.6 bits), Expect = 0.00016, P = 0.00016
Identities = 40/146 (27%), Positives = 71/146 (48%)
Query: 134 AWYQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWLIL 193
AW +F + F HA NHL N+ + G +E + + Y+ + + + + I
Sbjct: 166 AW-RFTSYMFLHAGLNHLLGNVIIQLLVGIPLEVAHKIWRIGPIYLLAVTSGSLLQYAID 224
Query: 194 PKNAVSVGASGAVFGL-FAISVLVKMSWDWRKI--LEVLILGQFVVEKVMEAAQASAGMS 250
P N++ VGAS V+ L FA V ++W + + VL+L F+ ++ A +
Sbjct: 225 P-NSLLVGASAGVYALIFAHVANVILNWHEMPLRWIRVLVLFVFIF---LDFGGA---IH 277
Query: 251 GTFIGGYSVQSINHIAHLSGALFGVF 276
F S++H+AH++GA+ G+F
Sbjct: 278 RRFYTN-DCDSVSHLAHIAGAVTGLF 302
>UNIPROTKB|G4N225 [details] [associations]
symbol:MGG_07535 "Rhomboid family membrane protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0030437 "ascospore formation" evidence=IMP]
[GO:0048315 "conidium formation" evidence=IMP] InterPro:IPR002610
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0009405
EMBL:CM001233 GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936
GO:GO:0048315 GO:GO:0030437 RefSeq:XP_003711448.1
ProteinModelPortal:G4N225 EnsemblFungi:MGG_07535T0 GeneID:2683455
KEGG:mgr:MGG_07535 Uniprot:G4N225
Length = 558
Score = 120 (47.3 bits), Expect = 0.00019, P = 0.00019
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 135 WYQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWLILP 194
W++F+T F HA H+ N+ G+ +E+ G+ +L Y+ G +
Sbjct: 298 WFRFITPIFMHAGLIHIGFNMLLQLTLGREMEQAIGSIRFFLVYMSAGIFGFVLGGNYAG 357
Query: 195 KNAVSVGASGAVFGLFAISVLVKMSWDWR 223
S GASG++FG+ A++ L+ + + W+
Sbjct: 358 AGTPSTGASGSLFGVIALT-LIDLLYSWK 385
>TAIR|locus:2066102 [details] [associations]
symbol:RBL1 "RHOMBOID-like 1" species:3702 "Arabidopsis
thaliana" [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021
GO:GO:0005794 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 eggNOG:NOG282167
HOGENOM:HOG000239666 EMBL:AK228551 IPI:IPI00548534
RefSeq:NP_180469.3 UniGene:At.47832 ProteinModelPortal:Q0WQX7
MEROPS:S54.A05 PaxDb:Q0WQX7 PRIDE:Q0WQX7 EnsemblPlants:AT2G29050.1
GeneID:817453 KEGG:ath:AT2G29050 TAIR:At2g29050 InParanoid:Q0WQX7
OMA:WINQKAC PhylomeDB:Q0WQX7 ProtClustDB:CLSN2918679
ArrayExpress:Q0WQX7 Genevestigator:Q0WQX7 Uniprot:Q0WQX7
Length = 389
Score = 117 (46.2 bits), Expect = 0.00024, P = 0.00024
Identities = 30/93 (32%), Positives = 49/93 (52%)
Query: 130 HNFPAWYQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVS 189
H W F T + HA H+ +N+ L G +E+E G + L Y+ +G + +S
Sbjct: 125 HKHEVWRLF-TCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGLLYMISGFGGSLLS 183
Query: 190 WLILPKNAVSVGASGAVFGLFAISVLVKMSWDW 222
L + +SVGASGA+FGL ++L ++ +W
Sbjct: 184 SLF-NRAGISVGASGALFGLLG-AMLSELLTNW 214
>FB|FBgn0003295 [details] [associations]
symbol:ru "roughoid" species:7227 "Drosophila melanogaster"
[GO:0042676 "compound eye cone cell fate commitment" evidence=IMP]
[GO:0005887 "integral to plasma membrane" evidence=ISS] [GO:0001752
"compound eye photoreceptor fate commitment" evidence=IGI]
[GO:0007173 "epidermal growth factor receptor signaling pathway"
evidence=NAS] [GO:0005886 "plasma membrane" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0008236
"serine-type peptidase activity" evidence=NAS] [GO:0007479 "leg
disc proximal/distal pattern formation" evidence=TAS] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0007427 "epithelial cell migration,
open tracheal system" evidence=IMP] [GO:0003015 "heart process"
evidence=IMP] [GO:0045177 "apical part of cell" evidence=IDA]
[GO:0050714 "positive regulation of protein secretion"
evidence=IGI] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0001745 "compound eye morphogenesis" evidence=IMP]
InterPro:IPR002610 InterPro:IPR017213 InterPro:IPR022764
Pfam:PF01694 PIRSF:PIRSF037470 GO:GO:0005783 EMBL:AE014296
GO:GO:0005887 GO:GO:0006508 GO:GO:0045177 GO:GO:0050714
GO:GO:0004252 PANTHER:PTHR22936 GO:GO:0007427 GO:GO:0007479
GO:GO:0001752 GO:GO:0042676 GO:GO:0003015
GeneTree:ENSGT00390000005726 EMBL:AF318284 EMBL:AY118997
RefSeq:NP_524790.1 UniGene:Dm.1452 STRING:Q9W0F8
EnsemblMetazoa:FBtr0072681 GeneID:44856 KEGG:dme:Dmel_CG1214
UCSC:CG1214-RA CTD:44856 FlyBase:FBgn0003295 eggNOG:NOG282518
InParanoid:Q9W0F8 OMA:SYIAHMT OrthoDB:EOG41C5BZ GenomeRNAi:44856
NextBio:837743 Uniprot:Q9W0F8
Length = 341
Score = 116 (45.9 bits), Expect = 0.00025, P = 0.00025
Identities = 35/143 (24%), Positives = 68/143 (47%)
Query: 136 YQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWLILPK 195
++F++ A HA+W HL N+ +FG +E G+ + Y+ G A + ++
Sbjct: 136 WRFLSYALLHASWLHLGYNVLTQLLFGVPLELVHGSLRTGVIYM-AGVLAGSLGTSVVDS 194
Query: 196 NAVSVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVVEKVMEAAQASAGMSGTFIG 255
VGASG V+ L A L + ++ ++ +I Q + + + +
Sbjct: 195 EVFLVGASGGVYALLAAQ-LASLLLNFGQMRHGVI--QLMAVILFVFCDLGYALYSRELA 251
Query: 256 GYSVQ---SINHIAHLSGALFGV 275
+ +Q S+++IAH++GAL G+
Sbjct: 252 MHQLQTRPSVSYIAHMTGALAGI 274
>TAIR|locus:2035190 [details] [associations]
symbol:RBL5 "RHOMBOID-like protein 5" species:3702
"Arabidopsis thaliana" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR002610
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0006508 GO:GO:0004252
PANTHER:PTHR22936 EMBL:AC008016 eggNOG:COG0705 UniGene:At.37569
UniGene:At.37570 HOGENOM:HOG000239666 IPI:IPI00537566 PIR:E96566
RefSeq:NP_175667.1 ProteinModelPortal:Q9SSR0 MEROPS:S54.A01
EnsemblPlants:AT1G52580.1 GeneID:841690 KEGG:ath:AT1G52580
TAIR:At1g52580 InParanoid:Q9SSR0 OMA:MANMISL PhylomeDB:Q9SSR0
ProtClustDB:CLSN2679734 Genevestigator:Q9SSR0 Uniprot:Q9SSR0
Length = 309
Score = 114 (45.2 bits), Expect = 0.00035, P = 0.00035
Identities = 27/88 (30%), Positives = 48/88 (54%)
Query: 136 YQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWLILPK 195
++ ++ + H + HL +N+ L G +E+E G + Y+ +G + VS L +
Sbjct: 107 WRLISCIWLHGGFLHLMANMISLMCIGMRLEQEFGFMRIGALYVISGLGGSLVSCLTDSQ 166
Query: 196 NA-VSVGASGAVFGLFAISVLVKMSWDW 222
VSVGASGA+FGL ++L ++ +W
Sbjct: 167 GERVSVGASGALFGLLG-AMLSELITNW 193
>TAIR|locus:2027448 [details] [associations]
symbol:RBL12 "RHOMBOID-like protein 12" species:3702
"Arabidopsis thaliana" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR002610 InterPro:IPR022764
Pfam:PF01694 GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 GO:GO:0006508 GO:GO:0004252 PANTHER:PTHR22936
EMBL:AC026238 eggNOG:COG0705 HOGENOM:HOG000064690 EMBL:AF370504
EMBL:AY081685 EMBL:AY086276 IPI:IPI00543257 PIR:F86319
RefSeq:NP_564058.1 UniGene:At.23332 ProteinModelPortal:Q9FZ81
MEROPS:S54.A07 PaxDb:Q9FZ81 PRIDE:Q9FZ81 EnsemblPlants:AT1G18600.1
GeneID:838441 KEGG:ath:AT1G18600 TAIR:At1g18600 InParanoid:Q9FZ81
OMA:SHIDIGH PhylomeDB:Q9FZ81 ProtClustDB:CLSN2687858
ArrayExpress:Q9FZ81 Genevestigator:Q9FZ81 Uniprot:Q9FZ81
Length = 336
Score = 94 (38.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 28/98 (28%), Positives = 47/98 (47%)
Query: 101 VFWIILLNLGLYVADHVFQVRSIKSLYLYH--NFPAW--YQFVTAAFCHANWNHLSSNLF 156
V +++ N G++V VF + + + ++ NF + + +T+AF H + H+ SN+
Sbjct: 136 VLGLVIANAGVFVMWRVFNQQFMMNNFMISLDNFKSGRLHTLITSAFSHIDIGHIVSNMI 195
Query: 157 FLYIFGKLVEEEEGNFG--LWLSYIFTGAAANFVSWLI 192
LY FG + NFG L GA V +LI
Sbjct: 196 GLYFFGTSIAR---NFGPQFLLKLYLAGALGGSVFYLI 230
Score = 60 (26.2 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 17/75 (22%), Positives = 40/75 (53%)
Query: 194 PKNAVSVGASGAVFGLFAISVLVK----MSWDWRKILEVLILGQFVVEK-VMEAAQASAG 248
P +GASGAV + + + + + ++ + ++LG F++ K ++ + ++
Sbjct: 250 PSRTPGLGASGAVNAIMLLDIFLHPRATLYLEFFIPVPAMLLGIFLIGKDILRITEGNSN 309
Query: 249 MSGT-FIGGYSVQSI 262
+SG+ +GG +V +I
Sbjct: 310 ISGSAHLGGAAVAAI 324
>TAIR|locus:2084465 [details] [associations]
symbol:RBL4 "RHOMBOID-like protein 4" species:3702
"Arabidopsis thaliana" [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR002610
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0005886
GO:GO:0009506 EMBL:CP002686 GO:GO:0006508 GO:GO:0004252
PANTHER:PTHR22936 IPI:IPI00518159 RefSeq:NP_850698.1
UniGene:At.19072 ProteinModelPortal:F4JBM4 MEROPS:S54.A06
PRIDE:F4JBM4 EnsemblPlants:AT3G53780.2 GeneID:824545
KEGG:ath:AT3G53780 OMA:GIRMERE Uniprot:F4JBM4
Length = 394
Score = 114 (45.2 bits), Expect = 0.00054, P = 0.00054
Identities = 40/142 (28%), Positives = 67/142 (47%)
Query: 136 YQFVTAAFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYIFTGAAANFVSWLILPK 195
++ ++ + H HL N+ L G +E E G + L Y+ +G + +S L L
Sbjct: 140 WRLLSCNWLHGGVVHLLMNMLTLLFIGIRMEREFGFIRIGLLYLISGFGGSILSALFLRS 199
Query: 196 NAVSVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVVEKVMEAAQASAGMSGTFIG 255
N +SVGASGAVFGL +L ++ +W ++ +V V+ A + G+ G G
Sbjct: 200 N-ISVGASGAVFGLLG-GMLSEIFINWTIYSNKVVT---IVTLVLIVA-VNLGL-GVLPG 252
Query: 256 GYSVQSINHIAHLSGALFGVFL 277
+++ AH+ G G L
Sbjct: 253 ------VDNFAHIGGFATGFLL 268
>ASPGD|ASPL0000061693 [details] [associations]
symbol:AN1372 species:162425 "Emericella nidulans"
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0004252 "serine-type endopeptidase
activity" evidence=IEA] InterPro:IPR002610 InterPro:IPR022764
Pfam:PF01694 GO:GO:0016021 EMBL:BN001308 GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 EnsemblFungi:CADANIAT00001239
HOGENOM:HOG000208687 OMA:FLPREWQ Uniprot:C8VRV7
Length = 571
Score = 116 (45.9 bits), Expect = 0.00055, P = 0.00055
Identities = 52/187 (27%), Positives = 85/187 (45%)
Query: 104 IILLNLGLYVADHVFQV--RSIKSLYL-YHNFPAWYQFVTAAFCHANWNHLSSNLFFLYI 160
II LN+G++V + R + ++ +P + V F H + HL N+ L+
Sbjct: 365 IIGLNVGIFVLWRAWPPAWRLLNRYFISVAAYPRVFGLVGNVFSHQHLMHLGINMSVLWF 424
Query: 161 FGKLVEEEEGNFGLWLSYIFTGAAANFVSWLI-LPKNAV---SVGASGAVFGLFAISVLV 216
FG + +E G YI +G +F S + + +N++ S+GAS A+ G+ A S L+
Sbjct: 425 FGTKLHDEIGRGNFLALYIASGVFGSFASLTMHVLRNSLFLTSLGASSAIAGVLAASALL 484
Query: 217 KMSWDWRKILEVLILGQFVVEKVMEAA-QASAGMSGTF--IGGYS---VQSINHIAHLSG 270
W + L + E + A AG+ TF +G V +++ AHL G
Sbjct: 485 HPGDKWT----IAFLPREWQESLSAPAWMFFAGLV-TFDIVGAVMKRHVPKLDYYAHLGG 539
Query: 271 ALFG-VF 276
L G VF
Sbjct: 540 YLTGAVF 546
>UNIPROTKB|I3LRY0 [details] [associations]
symbol:RHBDL3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] InterPro:IPR002610
InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0006508
GO:GO:0004252 PANTHER:PTHR22936 GeneTree:ENSGT00390000005726
EMBL:CU640398 EMBL:CU463935 Ensembl:ENSSSCT00000023363 OMA:LAQIAVY
Uniprot:I3LRY0
Length = 231
Score = 108 (43.1 bits), Expect = 0.00087, P = 0.00087
Identities = 46/176 (26%), Positives = 72/176 (40%)
Query: 110 GLYVADHVFQV---RSIKSLYLYH---NFPAWYQFVTAAFCHANWNHLSSNLFFLYIFGK 163
G+ + V QV R +K+ +YH AW +F+T F HA HL N+ + G
Sbjct: 8 GVSLNQFVLQVTHPRYLKNSLVYHPQLRAQAW-RFLTYIFMHAGIEHLGLNVVLQLLVGV 66
Query: 164 LVEEEEGNFGLWLSYIFTGAAANFVSWLILPKNAVSVGASGAVFGLFAISVL-VKMSWDW 222
+E G + L Y+ G A ++ + A VG+SG V+ L + + + M+W
Sbjct: 67 PLEMVHGATRIGLVYL-AGVVAGSLAVSVADMTAPVVGSSGGVYALVSAHLANIVMNWSG 125
Query: 223 RKILEVLILGQFVVEKVMEAAQASAGMSGTFIGGYS-VQSINHIAHLSGALFGVFL 277
K + +L V M A Y + +AHL G G+ L
Sbjct: 126 MKC-QFKLLRMAVALICMSMEFGRAVWLRFHPSAYPPCPHPSFVAHLGGVAVGITL 180
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.138 0.430 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 277 277 0.00080 115 3 11 22 0.41 33
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 39
No. of states in DFA: 610 (65 KB)
Total size of DFA: 211 KB (2116 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.19u 0.07s 22.26t Elapsed: 00:00:01
Total cpu time: 22.20u 0.07s 22.27t Elapsed: 00:00:01
Start: Sat May 11 05:47:00 2013 End: Sat May 11 05:47:01 2013