BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>037252
MNGDVAVASAYNDDEIGIHIENHGGSGRSGDFTDVDFLEEEPCIKCNRQRDENLLVCSQS
GCPISVHENCLSCGVKFDDVGNFYCPYCWYKCELMRTKELRKKAKETKKQLACFIDSKSF
SGDKKKENCRTDKGNELN

High Scoring Gene Products

Symbol, full name Information P value
AT1G14770 protein from Arabidopsis thaliana 3.0e-10
AT1G01150 protein from Arabidopsis thaliana 6.6e-10
AT1G68030 protein from Arabidopsis thaliana 2.3e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  037252
        (138 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2006792 - symbol:AT1G14770 species:3702 "Arabi...   153  3.0e-10   1
TAIR|locus:2035372 - symbol:AT1G01150 species:3702 "Arabi...   148  6.6e-10   1
TAIR|locus:2200201 - symbol:AT1G68030 species:3702 "Arabi...   115  2.3e-06   1


>TAIR|locus:2006792 [details] [associations]
            symbol:AT1G14770 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 EMBL:AC006917 EMBL:BT008587
            EMBL:AK118871 IPI:IPI00543450 RefSeq:NP_172930.1 RefSeq:NP_973829.1
            UniGene:At.41953 ProteinModelPortal:Q9LQV4 SMR:Q9LQV4
            EnsemblPlants:AT1G14770.1 EnsemblPlants:AT1G14770.2 GeneID:838042
            KEGG:ath:AT1G14770 TAIR:At1g14770 InParanoid:Q9LQV4 OMA:DEYSSRP
            PhylomeDB:Q9LQV4 ProtClustDB:CLSN2682046 ArrayExpress:Q9LQV4
            Genevestigator:Q9LQV4 Uniprot:Q9LQV4
        Length = 429

 Score = 153 (58.9 bits), Expect = 3.0e-10, P = 3.0e-10
 Identities = 25/51 (49%), Positives = 33/51 (64%)

Query:    40 EEPCIKCNRQRDENLLVCSQSGCPISVHENCLSCGVKFDDVGNFYCPYCWY 90
             E  C KC  +++  LL+CS+S C   VH+ CL+C V  D+ GNF CP CWY
Sbjct:   345 ENVCWKC--EKEGTLLICSRSECAAKVHKECLNCPVNVDEYGNFLCPLCWY 393


>TAIR|locus:2035372 [details] [associations]
            symbol:AT1G01150 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] InterPro:IPR001005
            InterPro:IPR009057 SMART:SM00717 EMBL:CP002684 GO:GO:0003677
            GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR017877
            PROSITE:PS50090 IPI:IPI00545609 RefSeq:NP_171623.1 UniGene:At.51444
            ProteinModelPortal:F4HQJ2 SMR:F4HQJ2 EnsemblPlants:AT1G01150.1
            GeneID:839294 KEGG:ath:AT1G01150 OMA:HENLHQL Uniprot:F4HQJ2
        Length = 345

 Score = 148 (57.2 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 38/137 (27%), Positives = 61/137 (44%)

Query:     3 GDVAVASAYNDDEI-GIHIENHGGSGRSGDFTDVDFLEEEPCIKCNRQRDENLLVCSQSG 61
             GD  V SA N      + ++     G S  F   + L E  CI C+   D+ ++ CS + 
Sbjct:    46 GDEDVNSAPNIFTYDNVPLKKRHYLGTSDTFRSFEPLNEHACIVCDIA-DDGVVPCSGNE 104

Query:    62 CPISVHENCLSCGVKFDDVGNFYCPYCWYKCELMXXXXXXXXXXXXXXXXXCFIDSKSFS 121
             CP++VH  C+   +  +D   FYCPYCW+K +                    +  S+  S
Sbjct:   105 CPLAVHRKCVE--LDCEDPATFYCPYCWFKEQATRSTALRTRGVAAAKTLVQYGCSELRS 162

Query:   122 GD--KKKENCRTDKGNE 136
             GD    +EN + + G++
Sbjct:   163 GDIVMTRENSQLENGSD 179


>TAIR|locus:2200201 [details] [associations]
            symbol:AT1G68030 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR001965 SMART:SM00249 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC012563
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 IPI:IPI00530051
            PIR:D96703 RefSeq:NP_176970.1 UniGene:At.52429
            ProteinModelPortal:Q9C9W7 SMR:Q9C9W7 EnsemblPlants:AT1G68030.1
            GeneID:843131 KEGG:ath:AT1G68030 TAIR:At1g68030 eggNOG:NOG312375
            HOGENOM:HOG000152231 InParanoid:Q9C9W7 OMA:SSESCEY PhylomeDB:Q9C9W7
            ProtClustDB:CLSN2914489 Genevestigator:Q9C9W7 Uniprot:Q9C9W7
        Length = 314

 Score = 115 (45.5 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 19/50 (38%), Positives = 25/50 (50%)

Query:    43 CIKCNRQRDENLLVCSQSGCPISVHENCLSCGVKFDDVGNFYCPYCWYKC 92
             C+ C  +    LL CS  GC + VH+ CL     + D G+FYC  C   C
Sbjct:   229 CVNC--KESGKLLFCSSDGCEVMVHQKCLDSPPSYHDAGDFYCSLCALTC 276


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.139   0.456    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      138       121   0.00091  102 3  11 22  0.38    31
                                                     29  0.49    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  576 (61 KB)
  Total size of DFA:  156 KB (2093 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.69u 0.16s 11.85t   Elapsed:  00:00:01
  Total cpu time:  11.69u 0.16s 11.85t   Elapsed:  00:00:01
  Start:  Sat May 11 05:52:11 2013   End:  Sat May 11 05:52:12 2013

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